1992 145 26 83 chr2 0 56 -250687798 - L1MA5 LINE L1 -3 6297 6239 1653 120 13 0 chr2 56 281 -250687573 - AluSq SINE Alu -85 228 1 1992 145 26 83 chr2 281 345 -250687509 - L1MA5 LINE L1 -61 6239 6173 423 0 0 0 chr2 345 392 -250687462 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1992 145 26 83 chr2 392 406 -250687448 - L1MA5 LINE L1 -127 6173 6160 1887 143 0 0 chr2 406 679 -250687175 - AluJb SINE Alu -28 284 12 1992 145 26 83 chr2 679 962 -250686892 - L1MA5 LINE L1 -140 6160 5902 1408 212 54 25 chr2 954 1282 -250686572 - L1M2 LINE L1 -4504 2345 2001 * 2186 72 0 0 chr2 1282 1545 -250686309 - AluY SINE Alu -48 263 1 1408 212 54 25 chr2 1545 1622 -250686232 - L1M2 LINE L1 -4848 2001 1928 780 195 0 0 chr2 1727 1855 -250685999 - FLAM_C SINE Alu -13 130 3 520 216 147 0 chr2 3471 3535 -250684319 - MER94 DNA DNA -1 133 80 2066 120 17 0 chr2 3535 3827 -250684027 - AluSx SINE Alu -15 297 1 520 216 147 0 chr2 3827 3878 -250683976 - MER94 DNA DNA -54 80 1 372 235 45 45 chr2 3884 4016 -250683838 + MIR3 SINE MIR 68 199 -9 31 0 0 0 chr2 8080 8111 -250679743 + AT_rich Low_complexity Low_complexity 1 31 0 196 321 46 18 chr2 8204 8313 -250679541 - L3b LINE CR1 -204 1379 1268 743 242 107 115 chr2 10223 10735 -250677119 + MLT1H LTR MaLR 42 549 0 2264 173 89 30 chr2 11097 11570 -250676284 + MLT1D LTR MaLR 5 505 0 377 270 59 26 chr2 11927 12079 -250675775 + MER67A LTR ERV1 387 543 0 1481 178 3 38 chr2 12760 13052 -250674802 - AluJo SINE Alu -18 294 13 273 322 16 16 chr2 13203 13324 -250674530 - MLT1H LTR MaLR -387 162 42 461 188 31 10 chr2 13659 13755 -250674099 + MER4A LTR ERV1 1 98 -566 1594 143 27 79 chr2 13755 14119 -250673735 + MER4A LTR ERV1 261 664 0 2696 118 3 6 chr2 15360 15725 -250672129 - THE1B LTR MaLR 0 364 1 11490 113 33 3 chr2 15725 17258 -250670596 - THE1B-int LTR MaLR 0 1580 1 2541 126 14 16 chr2 17258 17623 -250670231 - THE1B LTR MaLR 0 364 1 1844 135 0 82 chr2 18927 19246 -250668608 - MER4A LTR ERV1 0 664 372 264 263 197 0 chr2 19481 19618 -250668236 + MIR SINE MIR 32 195 -67 566 274 48 84 chr2 19894 20252 -250667602 - MLT1J1 LTR MaLR -37 409 65 286 309 40 24 chr2 21512 21638 -250666216 - L1ME3A LINE L1 -8 6162 6035 2071 231 57 19 chr2 21663 22186 -250665668 - MER90 LTR ERV1 0 614 72 200 295 90 41 chr2 23800 23922 -250663932 + MIR SINE MIR 20 147 -115 198 286 16 32 chr2 24001 24064 -250663790 + MIR3 SINE MIR 130 191 -17 197 275 0 0 chr2 24269 24309 -250663545 - L2 LINE L2 -14 3258 3219 * 239 313 153 14 chr2 24304 24448 -250663406 - MIR SINE MIR -93 169 6 1719 166 32 32 chr2 26067 26375 -250661479 + AluJo SINE Alu 1 308 -4 22 56 0 0 chr2 26456 26492 -250661362 + AT_rich Low_complexity Low_complexity 1 36 0 853 229 143 48 chr2 26493 26829 -250661025 - L1MC4 LINE L1 -437 7605 7238 1748 259 12 79 chr2 26831 27143 -250660711 - L1MC4a LINE L1 -803 7005 6674 1527 205 3 7 chr2 27143 27426 -250660428 + AluJo SINE Alu 1 282 -30 1748 259 12 79 chr2 27426 27533 -250660321 - L1MC4a LINE L1 -1134 6674 6635 342 0 0 0 chr2 27533 27571 -250660283 + (CA)n Simple_repeat Simple_repeat 2 39 0 1748 259 12 79 chr2 27571 27744 -250660110 - L1MC4a LINE L1 -1173 6635 6452 291 252 9 19 chr2 28247 28354 -250659500 + (TA)n Simple_repeat Simple_repeat 1 106 0 28 61 0 0 chr2 28412 28461 -250659393 + AT_rich Low_complexity Low_complexity 1 49 0 315 276 123 58 chr2 29005 29248 -250658606 + L1M4 LINE L1 2917 3175 -2971 880 228 106 26 chr2 29265 29577 -250658277 + L1M4 LINE L1 2142 2478 -3668 1652 138 0 0 chr2 29587 29826 -250658028 + L1P3 LINE L1 10 248 -6213 4742 131 58 99 chr2 29826 31256 -250656598 + pTR5 LTR ERV1 742 2433 -5 11163 107 15 14 chr2 31257 33063 -250654791 + L1P3 LINE L1 238 2041 -4420 3440 200 31 71 chr2 33063 34073 -250653781 + LTR5 LTR ERVK 1 969 0 11163 107 15 14 chr2 34073 34515 -250653339 + L1P3 LINE L1 2041 2499 -3962 22626 97 11 1 chr2 34515 38410 -250649444 + L1PA7 LINE L1 2254 6154 0 11163 107 15 14 chr2 38410 38444 -250649410 + L1P3 LINE L1 2499 2531 -3930 2023 61 4 8 chr2 38576 38838 -250649016 + AluY SINE Alu 34 294 -17 553 317 107 26 chr2 39186 39480 -250648374 - L2 LINE L2 -6 3307 3038 1628 122 35 8 chr2 39480 39735 -250648119 + AluSx SINE Alu 44 305 -7 553 317 107 26 chr2 39735 39959 -250647895 - L2 LINE L2 -275 3038 2742 24 53 0 0 chr2 40812 40850 -250647004 + AT_rich Low_complexity Low_complexity 1 38 0 349 350 106 0 chr2 41201 41381 -250646473 + MIR SINE MIR 49 247 -15 4491 172 86 19 chr2 41486 42520 -250645334 - L1MA4A LINE L1 -23 6982 5880 * 12065 197 19 11 chr2 42515 45098 -250642756 - L1MA4A LINE L1 -1221 5627 3022 10227 215 67 27 chr2 45426 46328 -250641526 - L1MA4A LINE L1 -3811 3037 2172 2103 121 3 0 chr2 46328 46618 -250641236 - AluSx SINE Alu -21 291 1 10227 215 67 27 chr2 46618 48437 -250639417 - L1MA4A LINE L1 -4676 2172 208 317 82 20 0 chr2 48689 48738 -250639116 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr2 49518 49544 -250638310 + AT_rich Low_complexity Low_complexity 1 26 0 226 296 101 16 chr2 49764 50011 -250637843 + L1ME4a LINE L1 5820 6087 -34 502 250 101 60 chr2 50508 50756 -250637098 - MIR SINE MIR 0 262 5 2315 103 0 0 chr2 51102 51402 -250636452 - AluSx SINE Alu -12 300 1 291 293 0 40 chr2 52047 52122 -250635732 + L2 LINE L2 3181 3252 -20 287 263 64 99 chr2 52543 52714 -250635140 - L3 LINE CR1 -350 1227 1063 2266 112 3 0 chr2 52906 53209 -250634645 + AluSx SINE Alu 1 304 -8 281 333 24 56 chr2 53224 53350 -250634504 + L2 LINE L2 3116 3237 -35 195 301 60 48 chr2 53516 53599 -250634255 - MIR SINE MIR -168 94 11 264 207 261 27 chr2 54790 54901 -250632953 + L2 LINE L2 3136 3272 0 2273 90 3 7 chr2 55311 55612 -250632242 + AluSc SINE Alu 1 300 -9 545 300 77 66 chr2 55723 56073 -250631781 - L2 LINE L2 -368 2946 2593 3759 227 55 2 chr2 56074 56923 -250630931 - MER45B DNA AcHobo -145 895 2 1543 208 5 49 chr2 56981 57191 -250630663 + Charlie4a DNA MER1_type 67 250 -1711 2060 111 7 24 chr2 57191 57489 -250630365 + AluSg SINE Alu 1 293 -17 1543 208 5 49 chr2 57489 57705 -250630149 + Charlie4a DNA MER1_type 250 474 -34 554 259 228 4 chr2 57724 57983 -250629871 - L2 LINE L2 -2959 355 39 318 218 45 115 chr2 58384 58457 -250629397 - HAL1 LINE L1 -1588 919 861 1939 117 28 14 chr2 58457 58748 -250629106 + AluSx SINE Alu 1 295 -17 318 218 45 115 chr2 58748 58830 -250629024 - HAL1 LINE L1 -1646 861 775 221 298 0 0 chr2 59532 59589 -250628265 + MER5B DNA MER1_type 122 178 0 492 229 144 8 chr2 60204 60322 -250627532 - MER94 DNA DNA 0 134 1 654 242 88 16 chr2 60660 60854 -250627000 - MIR SINE MIR -2 260 53 310 302 100 83 chr2 60954 61364 -250626490 - L2 LINE L2 -3 3269 2853 225 0 0 0 chr2 61470 61495 -250626359 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 335 252 93 0 chr2 64313 64420 -250623434 + MIR SINE MIR 100 216 -46 409 213 87 47 chr2 64442 64569 -250623285 - MIR SINE MIR -124 138 7 7411 54 5 13 chr2 65185 66662 -250621192 + SVA Other Other 1 1386 0 277 371 60 22 chr2 66778 67010 -250620844 - MIR SINE MIR -1 261 21 4387 189 9 40 chr2 67848 68848 -250619006 - L1 LINE L1 -1055 5091 4123 197 132 26 0 chr2 69017 69055 -250618799 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 573 270 20 14 chr2 69676 69824 -250618030 + MER5B DNA MER1_type 30 178 0 1921 169 3 3 chr2 69938 70246 -250617608 - AluJo SINE Alu -4 308 1 2148 103 3 0 chr2 71659 71941 -250615913 + AluSp SINE Alu 2 284 -29 1613 208 3 3 chr2 72110 72422 -250615432 + AluJb SINE Alu 1 312 0 336 222 247 31 chr2 72531 72693 -250615161 + L1ME3A LINE L1 5612 5808 -354 239 200 46 31 chr2 72722 72787 -250615067 - LTR43 LTR ERV1 -24 578 513 959 266 50 16 chr2 72875 73195 -250614659 - LTR43 LTR ERV1 -141 461 131 998 209 59 62 chr2 73276 73615 -250614239 + L1ME3A LINE L1 5825 6162 -8 3698 148 26 11 chr2 74109 74717 -250613137 + L1MC1 LINE L1 5709 6325 -8 2678 99 79 27 chr2 74718 75060 -250612794 + MSTA LTR MaLR 1 369 -59 1830 144 27 27 chr2 75060 75359 -250612495 + AluSx SINE Alu 1 299 -13 2678 99 79 27 chr2 75359 75421 -250612433 + MSTA LTR MaLR 369 426 -2 2454 208 73 7 chr2 76767 77333 -250610521 - L1MA9 LINE L1 -539 5773 5166 1922 181 20 75 chr2 77326 77834 -250610020 + L1MA9 LINE L1 5803 6282 -30 * 22 0 0 0 chr2 77834 77856 -250609998 + AT_rich Low_complexity Low_complexity 1 22 0 1157 218 20 110 chr2 77918 78317 -250609537 + MLT1A1 LTR MaLR 1 363 -2 2344 135 114 5 chr2 80626 81012 -250606842 - MSTA LTR MaLR 0 428 1 1931 73 0 8 chr2 81367 81614 -250606240 + AluY SINE Alu 54 298 -13 32 75 0 0 chr2 82008 82075 -250605779 + AT_rich Low_complexity Low_complexity 1 67 0 1804 87 0 0 chr2 82080 82310 -250605544 - PABL_A LTR ERV1 -430 230 1 10992 77 15 1 chr2 82310 83724 -250604130 - PABL_A-int LTR ERV1 0 5015 3583 198 208 188 0 chr2 83975 84023 -250603831 - L2 LINE L2 -249 3023 2967 270 247 0 55 chr2 84042 84115 -250603739 + L2 LINE L2 3242 3310 -3 312 291 81 12 chr2 84238 84410 -250603444 - L1MEc LINE L1 -4976 1587 1404 720 188 0 99 chr2 84478 84659 -250603195 + Tigger1 DNA MER2_type 1 163 -2255 * 1236 156 24 5 chr2 84641 84853 -250603001 + Tigger1 DNA MER2_type 2203 2418 0 7310 223 52 31 chr2 84853 84916 -250602938 - L1MEc LINE L1 -1913 4469 4409 2269 105 20 0 chr2 84916 85220 -250602634 - AluSp SINE Alu -3 310 1 7310 223 52 31 chr2 85220 85864 -250601990 - L1MEc LINE L1 -1973 4409 3780 192 77 0 0 chr2 85864 85890 -250601964 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7310 223 52 31 chr2 85890 86784 -250601070 - L1MEc LINE L1 -2602 3780 2811 2187 170 31 0 chr2 86784 87137 -250600717 - THE1B LTR MaLR 0 364 1 7310 223 52 31 chr2 87137 87605 -250600249 - L1MEc LINE L1 -3571 2811 2354 2451 162 42 50 chr2 87609 88091 -250599763 + MER44D DNA MER2_type 4 481 -224 2371 136 48 112 chr2 88114 88778 -250599076 + MER4A LTR ERV1 1 465 0 1280 168 52 22 chr2 88780 89012 -250598842 + MER44D DNA MER2_type 479 589 -16 421 214 44 13 chr2 89016 89176 -250598678 - L1MEc LINE L1 -4018 2365 2202 671 91 10 20 chr2 89185 89284 -250598570 + MER4A LTR ERV1 1 98 -566 1649 103 45 91 chr2 89284 89646 -250598208 + MER4A LTR ERV1 261 664 0 328 255 41 0 chr2 89646 89744 -250598110 - L1MEc LINE L1 -4190 2194 2093 597 265 180 51 chr2 90523 90995 -250596859 - L1MEc LINE L1 -5381 991 459 538 166 32 35 chr2 91029 91184 -250596670 + MER51A LTR ERV1 1 154 -223 1631 174 46 10 chr2 91186 91490 -250596364 + MER51B LTR ERV1 63 377 0 330 242 74 34 chr2 91609 91758 -250596096 - HAL1b LINE L1 0 1348 1194 1210 65 130 0 chr2 92366 92535 -250595319 - LTR17 LTR ERV1 -2 778 588 898 85 0 0 chr2 92551 92669 -250595185 + AluY SINE Alu 187 304 -7 4898 67 0 3 chr2 92669 93269 -250594585 - LTR17 LTR ERV1 -182 598 1 2403 65 0 0 chr2 93269 93560 -250594294 - HERV17 LTR ERV1 0 8626 8336 303 98 0 0 chr2 93550 93591 -250594263 - HERV17 LTR ERV1 -1077 7549 7509 * 9680 47 10 0 chr2 93583 94731 -250593123 - HERV17 LTR ERV1 -2607 6019 4861 14584 45 4 3 chr2 94833 97002 -250590852 - HERV17 LTR ERV1 -4023 4603 2432 13791 70 17 26 chr2 97001 98835 -250589019 - HERV17 LTR ERV1 -6808 1818 1 * 6348 64 30 5 chr2 98835 99596 -250588258 - LTR17 LTR ERV1 0 780 1 218 340 53 0 chr2 100110 100204 -250587650 - L2 LINE L2 -262 3051 2953 1518 183 7 43 chr2 100827 101128 -250586726 + AluJb SINE Alu 1 290 -22 484 358 29 5 chr2 102674 102878 -250584976 + L3 LINE CR1 1261 1469 -108 7657 52 6 0 chr2 102962 104312 -250583542 + L1PA7 LINE L1 4793 6152 -2 208 308 91 28 chr2 105400 105543 -250582311 + MIR SINE MIR 36 187 -75 4364 192 56 10 chr2 106711 108046 -250579808 + L1MC2 LINE L1 4791 6170 -174 196 270 27 40 chr2 108747 108821 -250579033 + MIR3 SINE MIR 84 156 -52 32 0 0 0 chr2 108911 108943 -250578911 + AT_rich Low_complexity Low_complexity 1 32 0 378 61 0 0 chr2 109715 109764 -250578090 + (CA)n Simple_repeat Simple_repeat 2 50 0 2636 51 0 0 chr2 110276 110587 -250577267 + AluY SINE Alu 1 311 0 233 250 40 13 chr2 110740 110816 -250577038 - HsTC2 DNA Tc2 -1820 78 1 264 269 75 32 chr2 112932 113025 -250574829 + HAL1 LINE L1 806 902 -1605 450 219 0 0 chr2 113144 113249 -250574605 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 713 136 19 0 chr2 113249 113352 -250574502 - AluSx SINE Alu -16 293 189 969 149 0 0 chr2 113352 113493 -250574361 - AluSx SINE Alu -172 141 1 22 0 0 0 chr2 113594 113616 -250574238 + AT_rich Low_complexity Low_complexity 1 22 0 1870 167 17 0 chr2 116057 116356 -250571498 + AluSx SINE Alu 1 304 -8 3196 103 38 0 chr2 117228 117324 -250570530 + L1PB1 LINE L1 5684 5775 -376 182 37 37 0 chr2 117324 117351 -250570503 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 324 0 0 0 chr2 117350 117386 -250570468 + (CA)n Simple_repeat Simple_repeat 2 37 0 3196 103 38 0 chr2 117351 117737 -250570117 + L1PB1 LINE L1 5775 6148 -3 637 307 32 42 chr2 118728 119158 -250568696 + LTR35 LTR ERV1 141 556 0 1559 256 22 24 chr2 119163 119577 -250568277 + LTR35-int LTR ERV1 5 417 -1369 1005 96 0 20 chr2 119585 119731 -250568123 + L1PA4 LINE L1 6012 6154 -1 5983 176 49 36 chr2 119812 121105 -250566749 + LTR57-int LTR ERVL 288 1596 -3747 * 6258 159 79 78 chr2 120157 122450 -250565404 + LTR35-int LTR ERV1 682 4183 -2148 625 135 76 189 chr2 122586 122771 -250565083 + LOR1-int LTR ERV1 3786 3949 -4171 367 93 30 81 chr2 122897 122997 -250564857 + LOR1-int LTR ERV1 4602 4682 -1264 1108 189 5 5 chr2 123001 123191 -250564663 + LOR1-int LTR ERV1 6908 7097 -1023 4043 153 59 22 chr2 123194 123480 -250564374 + MER49 LTR ERV1 1 275 -648 2619 127 16 0 chr2 123480 123849 -250564005 + THE1C LTR MaLR 1 375 0 4043 153 59 22 chr2 123849 124294 -250563560 + MER49 LTR ERV1 275 759 -164 365 282 71 81 chr2 124481 124852 -250563002 + LOR1-int LTR ERV1 4971 7466 -654 736 270 59 55 chr2 125043 125495 -250562359 + LTR35 LTR ERV1 88 556 0 23 0 0 0 chr2 125615 125638 -250562216 + AT_rich Low_complexity Low_complexity 1 23 0 1104 277 108 36 chr2 125792 126290 -250561564 + MLT1E LTR MaLR 52 585 -8 225 0 0 0 chr2 126294 126319 -250561535 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 481 234 70 88 chr2 126335 126562 -250561292 + L1MC4 LINE L1 7820 8042 0 2795 168 25 41 chr2 126677 127194 -250560660 - LTR22 LTR ERVK 0 509 1 819 115 0 0 chr2 127384 127514 -250560340 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 1607 210 49 3 chr2 127840 128187 -250559667 + MLT1A1 LTR MaLR 1 363 -2 331 313 146 18 chr2 128261 128536 -250559318 + L1MEd LINE L1 602 911 -5723 437 295 100 33 chr2 128825 129205 -250558649 + L1MEd LINE L1 1220 1716 -4971 415 323 46 5 chr2 129218 129413 -250558441 + L2 LINE L2 2636 2838 -476 516 253 133 28 chr2 129495 129744 -250558110 + L2 LINE L2 3039 3313 0 26 30 0 0 chr2 131058 131091 -250556763 + AT_rich Low_complexity Low_complexity 1 33 0 305 328 61 22 chr2 131297 131477 -250556377 - MIR SINE MIR -43 219 33 6387 102 48 1 chr2 132128 133055 -250554799 - Tigger1 DNA MER2_type -777 1641 672 605 203 47 20 chr2 133300 133448 -250554406 - L1MC2 LINE L1 -9 6335 6184 376 238 139 112 chr2 134146 134676 -250553178 + L1M2 LINE L1 455 1434 -5415 448 66 0 0 chr2 134886 134947 -250552907 + Alu SINE Alu 235 295 -14 284 62 0 21 chr2 135352 135400 -250552454 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 135618 135657 -250552197 + AT_rich Low_complexity Low_complexity 1 39 0 2252 248 95 11 chr2 135803 136509 -250551345 - L1ME1 LINE L1 -128 6107 5343 1109 213 49 0 chr2 136524 136787 -250551067 - L1MA4 LINE L1 -11 6289 6014 360 271 43 7 chr2 136883 137023 -250550831 - L1ME1 LINE L1 -5000 1396 1252 243 278 47 53 chr2 137103 137314 -250550540 - L1ME LINE L1 -4723 1278 778 475 310 90 29 chr2 137720 138097 -250549757 - L2 LINE L2 -662 2652 2253 21 0 0 0 chr2 138759 138780 -250549074 + AT_rich Low_complexity Low_complexity 1 21 0 1732 188 28 17 chr2 139330 139691 -250548163 + MLT1A1 LTR MaLR 1 365 0 263 28 28 0 chr2 140227 140263 -250547591 + (TAA)n Simple_repeat Simple_repeat 3 39 0 246 269 51 0 chr2 141120 141198 -250546656 - MIR SINE MIR -95 167 86 472 193 11 0 chr2 142486 142574 -250545280 + MER20 DNA MER1_type 129 217 -2 216 226 32 16 chr2 143215 143277 -250544577 - MIR SINE MIR -172 90 28 435 223 48 0 chr2 145221 145324 -250542530 - Charlie2 DNA MER1_type -892 1970 1863 376 365 68 4 chr2 145354 145617 -250542237 - Charlie2 DNA MER1_type -2502 280 1 325 286 20 34 chr2 146387 146534 -250541320 + L1MC4a LINE L1 5296 5440 -681 326 332 50 23 chr2 147255 147604 -250540250 + L1MC4a LINE L1 5531 5819 -302 21 0 0 0 chr2 147612 147633 -250540221 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 147934 147955 -250539899 + (TG)n Simple_repeat Simple_repeat 2 22 0 2878 10 0 0 chr2 149492 149798 -250538056 + AluYa5 SINE Alu 1 306 -5 1451 167 29 8 chr2 150574 150814 -250537040 - AluSx SINE Alu -28 284 40 22 35 0 0 chr2 151244 151273 -250536581 + AT_rich Low_complexity Low_complexity 1 29 0 240 149 0 0 chr2 151522 151569 -250536285 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 2387 70 0 0 chr2 152488 152788 -250535066 - L1PA6 LINE L1 0 6154 5855 234 269 160 9 chr2 152792 153004 -250534850 + L1ME4a LINE L1 5865 6108 -13 187 317 29 10 chr2 154506 154610 -250533244 - MIR SINE MIR 0 262 157 2315 90 10 3 chr2 154921 155221 -250532633 - AluSq SINE Alu -11 302 1 207 266 11 68 chr2 156146 156323 -250531531 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 272 250 64 70 chr2 156349 156509 -250531345 + MIR SINE MIR 58 216 -46 378 316 9 47 chr2 156509 156724 -250531130 + MIR SINE MIR 1 207 -55 1059 182 20 20 chr2 157623 157876 -250529978 + L1MA4 LINE L1 6044 6296 -4 326 220 180 20 chr2 158112 158304 -250529550 + LTR52 LTR ERVL 9 169 -252 378 0 0 0 chr2 158304 158346 -250529508 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 220 180 20 chr2 158346 158398 -250529456 + LTR52 LTR ERVL 169 397 -24 586 231 118 18 chr2 159250 159419 -250528435 + MER105 DNA DNA 1 186 -18 6378 232 63 56 chr2 159756 162766 -250525088 + L1M4b LINE L1 15 3035 -3922 231 36 0 0 chr2 162766 162794 -250525060 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6378 232 63 56 chr2 162794 163671 -250524183 + L1M4b LINE L1 3035 3904 -3053 359 221 132 29 chr2 163676 163812 -250524042 + LTR16A1 LTR ERVL 296 445 -12 222 196 22 0 chr2 163823 163869 -250523985 + MIR SINE MIR 70 116 -146 247 282 155 0 chr2 164297 164400 -250523454 + L1ME LINE L1 5532 5650 -471 21 36 0 0 chr2 164572 164600 -250523254 + AT_rich Low_complexity Low_complexity 1 28 0 285 300 17 33 chr2 165443 165563 -250522291 + MER20 DNA MER1_type 100 217 -2 973 149 6 6 chr2 165732 165907 -250521947 + L1MB2 LINE L1 5288 5462 -721 3651 159 88 45 chr2 165923 167302 -250520552 - pTR5 LTR ERV1 -23 1683 31 1118 227 28 18 chr2 167305 167587 -250520267 + L1MB2 LINE L1 5885 6169 -2 246 128 0 0 chr2 167796 167835 -250520019 + (T)n Simple_repeat Simple_repeat 1 39 0 1660 113 0 0 chr2 167843 168055 -250519799 - AluSg SINE Alu -98 212 1 245 270 261 0 chr2 170733 170848 -250517006 - L1M4 LINE L1 -5477 1157 1013 921 232 161 39 chr2 171339 171899 -250515955 - MER92B LTR ERV1 -8 628 1 217 266 101 0 chr2 175243 175322 -250512532 + L2 LINE L2 3210 3296 -17 200 341 103 48 chr2 175471 175597 -250512257 - L2 LINE L2 -3 3269 3137 213 315 46 8 chr2 176050 176180 -250511674 - MIR SINE MIR -119 143 9 279 236 88 54 chr2 177785 177933 -250509921 - L1MC4a LINE L1 -1424 6384 6232 1333 193 227 14 chr2 178016 178369 -250509485 + MSTA LTR MaLR 1 428 0 416 244 25 10 chr2 179009 179146 -250508708 - L1M4 LINE L1 -5924 710 14 2176 122 140 8 chr2 179541 179919 -250507935 + MSTA LTR MaLR 1 428 0 3688 112 11 53 chr2 180453 181061 -250506793 + MER4B LTR ERV1 1 583 -27 543 101 0 0 chr2 182619 182698 -250505156 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 34467 55 11 14 chr2 182798 187064 -250500790 - HERV17 LTR ERV1 -4377 4249 1 6059 62 30 5 chr2 187064 187825 -250500029 - LTR17 LTR ERV1 0 780 1 1240 226 98 18 chr2 238018 238457 -250449397 + HERV3 LTR ERV1 3412 3960 -976 1587 229 60 86 chr2 238530 239028 -250448826 + HERV3 LTR ERV1 3605 4089 -782 2781 244 2 0 chr2 239128 239657 -250448197 + HERV3 LTR ERV1 1175 1704 -6722 1987 229 11 0 chr2 239756 240127 -250447727 + HERV3 LTR ERV1 1634 2008 -6418 1240 115 6 33 chr2 240127 240310 -250447544 + AluSc SINE Alu 1 178 -131 593 234 14 7 chr2 240411 240552 -250447302 - Tigger1 DNA MER2_type -2275 143 2 673 188 108 5 chr2 240565 240751 -250447103 - L1MCa LINE L1 -3950 2476 2272 752 158 68 15 chr2 240753 240886 -250446968 - AluJ SINE Alu -16 296 157 638 213 41 0 chr2 241014 241136 -250446718 - AluJ SINE Alu -140 172 46 995 175 62 42 chr2 241160 241401 -250446453 - L1MCa LINE L1 -4175 2251 2001 2017 141 0 10 chr2 241401 241699 -250446155 + AluY SINE Alu 1 295 -16 995 175 62 42 chr2 241699 241765 -250446089 - L1MCa LINE L1 -4425 2001 1938 316 26 0 136 chr2 241885 242076 -250445778 + (GGGAGA)n Simple_repeat Simple_repeat 1 165 0 268 261 34 23 chr2 246201 246289 -250441565 - MLT1J2 LTR MaLR 0 450 362 324 316 24 36 chr2 246389 246557 -250441297 - MLT1J1 LTR MaLR -241 205 40 208 146 0 24 chr2 248475 248516 -250439338 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 181 191 43 0 chr2 248793 248840 -250439014 - MIR SINE MIR -66 142 94 485 216 27 20 chr2 249115 249258 -250438596 + MSTC LTR MaLR 20 162 -203 512 244 189 11 chr2 250383 250563 -250437291 + MER20 DNA MER1_type 1 212 -7 362 283 65 62 chr2 252316 252687 -250435167 + L2 LINE L2 2941 3312 -1 4198 213 23 13 chr2 252875 254140 -250433714 + L1MB3 LINE L1 4898 6181 -2 451 299 81 15 chr2 258765 259099 -250428755 - L2 LINE L2 -734 2580 2225 26 0 0 0 chr2 259667 259693 -250428161 + AT_rich Low_complexity Low_complexity 1 26 0 343 267 114 23 chr2 260406 260537 -250427317 + Charlie8 DNA MER1_type 14 156 -2261 25 0 0 0 chr2 260761 260786 -250427068 + AT_rich Low_complexity Low_complexity 1 25 0 1873 150 0 27 chr2 260983 261276 -250426578 + AluJb SINE Alu 1 285 -27 208 237 26 35 chr2 261325 261439 -250426415 + A-rich Low_complexity Low_complexity 3 115 0 296 162 68 14 chr2 261482 261556 -250426298 - MER116 DNA Mariner -2 78 1 762 240 55 87 chr2 261777 262124 -250425730 - MLT1A1 LTR MaLR 0 365 29 4585 188 46 23 chr2 262126 262841 -250425013 - L1 LINE L1 -841 5305 4608 1796 96 46 0 chr2 262841 263081 -250424773 - AluY SINE Alu -20 291 41 4585 188 46 23 chr2 263081 263201 -250424653 - L1 LINE L1 -1538 4608 4492 4987 60 3 8 chr2 263201 263830 -250424024 - L1PA8 LINE L1 -1 6171 5546 4585 188 46 23 chr2 263830 264024 -250423830 - L1 LINE L1 -1654 4492 4248 324 0 0 0 chr2 264024 264060 -250423794 + (TG)n Simple_repeat Simple_repeat 2 37 0 4585 188 46 23 chr2 264060 264096 -250423758 - L1 LINE L1 -1898 4248 4214 1512 161 59 3 chr2 264232 264554 -250423300 - L1 LINE L1 -2437 3709 3370 983 267 64 20 chr2 264563 264953 -250422901 - L1 LINE L1 -3090 3056 2650 185 229 82 0 chr2 265213 265274 -250422580 + MIR SINE MIR 47 112 -150 1554 199 7 34 chr2 266416 266712 -250421142 - AluJb SINE Alu -24 288 1 10643 93 68 11 chr2 267450 269476 -250418378 - L1PBa LINE L1 -3938 2925 634 1295 152 0 0 chr2 269476 269674 -250418180 - L1PBa LINE L1 -6663 200 3 261 83 0 0 chr2 270913 270949 -250416905 + (TA)n Simple_repeat Simple_repeat 1 36 0 470 228 179 55 chr2 271804 272062 -250415792 - MLT1H LTR MaLR 0 549 314 1277 239 38 11 chr2 272147 272591 -250415263 + L1ME2 LINE L1 2121 2576 -3570 5331 255 91 37 chr2 272600 274409 -250413445 + L1ME2 LINE L1 2835 4544 -1620 6107 23 0 10 chr2 274409 275116 -250412738 + L1PA3 LINE L1 5452 6151 -4 5331 255 91 37 chr2 275116 276363 -250411491 + L1ME2 LINE L1 4544 6064 -100 1333 241 95 28 chr2 276363 276836 -250411018 + MLT1D LTR MaLR 1 505 0 5331 255 91 37 chr2 276836 276905 -250410949 + L1ME2 LINE L1 6064 6128 -36 2525 117 14 3 chr2 277256 277616 -250410238 + THE1B LTR MaLR 1 364 0 9795 116 38 38 chr2 277616 279196 -250408658 + THE1B-int LTR MaLR 1 1580 0 2239 124 74 0 chr2 279196 279535 -250408319 + THE1B LTR MaLR 1 364 0 225 203 72 29 chr2 279671 279740 -250408114 + L1ME2 LINE L1 6057 6128 -36 21 57 0 0 chr2 279851 279886 -250407968 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 281586 281609 -250406245 + AT_rich Low_complexity Low_complexity 1 23 0 1171 125 0 0 chr2 281843 282003 -250405851 - AluSg/x SINE Alu -16 294 135 1169 284 51 19 chr2 282403 282928 -250404926 + HAL1 LINE L1 799 1340 -1167 298 287 81 23 chr2 283179 283353 -250404501 + HAL1 LINE L1 2019 2202 -305 995 251 95 10 chr2 283614 283909 -250403945 + MER82 DNA MER2_type 306 625 -28 513 209 98 20 chr2 284414 284567 -250403287 - L1MB5 LINE L1 0 6174 6010 569 278 17 26 chr2 284575 284805 -250403049 + HAL1 LINE L1 1019 1246 -1261 4550 204 73 75 chr2 284905 286459 -250401395 - L1M4 LINE L1 -848 5298 3749 242 299 0 31 chr2 287571 287668 -250400186 + CT-rich Low_complexity Low_complexity 3 96 0 1755 157 14 17 chr2 288860 289154 -250398700 + AluJo SINE Alu 2 294 -18 5132 163 31 31 chr2 289478 290192 -250397662 - L1MA8 LINE L1 -4 6287 5573 2139 125 0 0 chr2 290192 290489 -250397365 + AluSx SINE Alu 1 297 -15 5132 163 31 31 chr2 290489 291022 -250396832 - L1MA8 LINE L1 -717 5574 5042 2341 186 28 24 chr2 291023 291491 -250396363 + L1MA8 LINE L1 4567 5036 -1110 21 0 0 0 chr2 291499 291520 -250396334 + AT_rich Low_complexity Low_complexity 1 21 0 1025 190 22 0 chr2 291568 291747 -250396107 - AluJb SINE Alu -3 309 127 809 278 69 39 chr2 292199 292606 -250395248 + L1ME4a LINE L1 5502 5920 -201 198 171 0 0 chr2 292841 292882 -250394972 + (TTA)n Simple_repeat Simple_repeat 2 42 0 358 238 48 55 chr2 293483 293671 -250394183 - MLT1A2 LTR MaLR -181 209 7 3045 148 30 0 chr2 294242 294748 -250393106 - L1MA4A LINE L1 0 6303 5783 249 266 0 0 chr2 294748 294842 -250393012 + (TG)n Simple_repeat Simple_repeat 2 95 0 1063 156 14 46 chr2 294845 295063 -250392791 - L1MA4A LINE L1 -514 5789 5579 260 245 21 32 chr2 296262 296356 -250391498 + L1ME3A LINE L1 5348 5440 -681 2168 144 69 15 chr2 297377 297781 -250390073 + MSTA LTR MaLR 1 426 -2 256 343 35 47 chr2 299652 299993 -250387861 + L1ME3A LINE L1 5609 5945 -225 239 261 14 0 chr2 300345 300414 -250387440 - MER5A DNA MER1_type -84 105 36 227 270 0 0 chr2 300508 300571 -250387283 + L1P LINE L1 4940 5002 -1144 703 271 171 39 chr2 300776 301395 -250386459 + L1MC4a LINE L1 5267 5967 -1841 1512 233 30 30 chr2 301535 301995 -250385859 - MLT1C LTR MaLR -2 465 6 333 194 32 0 chr2 302070 302132 -250385722 - AluJ/FLAM SINE Alu -216 86 23 531 256 70 44 chr2 302719 302989 -250384865 - MER97a DNA MER1_type? -16 878 602 845 106 12 32 chr2 302991 303235 -250384619 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 722 167 13 51 chr2 303263 303419 -250384435 - FRAM SINE Alu 0 176 27 721 246 99 9 chr2 303463 303695 -250384159 - MER97b DNA MER1_type? -780 273 21 276 30 0 0 chr2 304051 304084 -250383770 + (TTA)n Simple_repeat Simple_repeat 2 34 0 181 211 0 0 chr2 305994 306032 -250381822 - MIR SINE MIR -67 141 104 669 213 35 0 chr2 306157 306298 -250381556 + MER20 DNA MER1_type 5 150 -69 440 247 283 11 chr2 306303 306586 -250381268 - MER57A LTR ERV1 -2 401 42 198 407 12 0 chr2 307325 307406 -250380448 + L2 LINE L2 3187 3268 -4 1267 191 100 16 chr2 308598 308918 -250378936 + MLT2C1 LTR ERVL 3 349 -48 467 182 30 0 chr2 310227 310326 -250377528 - MLT2C1 LTR ERVL -295 102 1 444 206 178 14 chr2 312679 312825 -250375029 - MER21B LTR ERV1 -365 498 329 392 51 0 17 chr2 317545 317604 -250370250 + L1PA6 LINE L1 6097 6154 0 186 289 0 0 chr2 318100 318152 -250369702 + L2 LINE L2 3262 3313 0 26 0 0 0 chr2 319458 319484 -250368370 + AT_rich Low_complexity Low_complexity 1 26 0 3290 145 6 15 chr2 320157 320687 -250367167 - MER1A DNA MER1_type -2 525 1 1670 195 33 0 chr2 322396 322698 -250365156 - AluJo SINE Alu 0 312 1 2489 111 45 0 chr2 324734 325093 -250362761 - THE1C LTR MaLR 0 375 1 321 303 82 65 chr2 326132 326485 -250361369 + HAL1b LINE L1 324 682 -666 402 276 77 7 chr2 326946 327146 -250360708 + L1M4 LINE L1 4061 4274 -1872 2310 185 18 25 chr2 327173 327410 -250360444 - Tigger2 DNA MER2_type 0 2718 2484 2527 60 0 3 chr2 327410 327711 -250360143 + AluY SINE Alu 1 300 -11 2310 185 18 25 chr2 327711 327922 -250359932 - Tigger2 DNA MER2_type -234 2484 2273 450 159 0 0 chr2 327912 327981 -250359873 - Tigger2 DNA MER2_type -2649 69 1 * 425 337 101 45 chr2 328147 328681 -250359173 - L1MEd LINE L1 -5003 1116 553 2090 181 37 16 chr2 329219 329655 -250358199 + MER65A LTR ERV1 1 445 0 2610 64 0 0 chr2 334654 334965 -250352889 - AluY SINE Alu 0 311 1 210 359 41 14 chr2 335260 335405 -250352449 - MIR SINE MIR -27 235 87 27 0 0 0 chr2 337645 337672 -250350182 + AT_rich Low_complexity Low_complexity 1 27 0 339 286 97 10 chr2 339387 339583 -250348271 + L1MDa LINE L1 188 400 -6140 725 219 38 50 chr2 340176 340414 -250347440 + L1MDa LINE L1 1048 1282 -5261 721 241 66 38 chr2 340425 340744 -250347110 - L1MDa LINE L1 -4344 2196 1869 356 69 0 52 chr2 340766 340824 -250347030 + Alu SINE Alu 248 302 0 305 313 91 0 chr2 340869 340968 -250346886 + L1MDa LINE L1 2091 2198 -4342 1044 98 0 0 chr2 341068 341211 -250346643 - L1P4 LINE L1 -449 5719 5577 887 102 0 0 chr2 341214 341352 -250346502 + L1P4 LINE L1 5410 5547 -621 246 277 0 15 chr2 341770 341835 -250346019 + CT-rich Low_complexity Low_complexity 5 68 0 631 288 245 8 chr2 343194 343725 -250344129 + L2 LINE L2 1294 1950 -1364 386 298 0 10 chr2 345791 345895 -250341959 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 351 286 0 0 chr2 345909 346087 -250341767 + (TG)n Simple_repeat Simple_repeat 1 178 0 320 280 126 14 chr2 346448 346591 -250341263 + MIR SINE MIR 104 262 0 2074 116 7 0 chr2 347018 347312 -250340542 + AluSq SINE Alu 4 299 -14 248 305 107 15 chr2 347415 347546 -250340308 - MIR SINE MIR -89 173 31 352 237 13 0 chr2 348968 349120 -250338734 + (TG)n Simple_repeat Simple_repeat 1 154 0 627 188 0 18 chr2 351291 351456 -250336398 + CT-rich Low_complexity Low_complexity 1 162 0 200 300 83 0 chr2 351621 351681 -250336173 - L2 LINE L2 0 3272 3208 356 69 0 52 chr2 352545 352603 -250335251 + Alu SINE Alu 248 302 0 1654 233 43 31 chr2 352648 353435 -250334419 + L1MD1 LINE L1 2091 2890 -3650 836 148 32 0 chr2 353435 353590 -250334264 + L1MB2 LINE L1 6009 6168 -3 1654 233 43 31 chr2 353590 353717 -250334137 + L1MD1 LINE L1 2890 3014 -3526 2828 128 12 16 chr2 353758 353924 -250333930 - MSTA LTR MaLR 0 428 263 2884 107 81 2 chr2 353924 354303 -250333551 + MLT2A2 LTR ERVL 1 418 -35 519 17 0 0 chr2 354303 354363 -250333491 + (TA)n Simple_repeat Simple_repeat 2 61 0 2884 107 81 2 chr2 354363 354403 -250333451 + MLT2A2 LTR ERVL 418 453 0 2828 128 12 16 chr2 354403 354666 -250333188 - MSTA LTR MaLR -165 263 1 1906 293 108 11 chr2 354666 356049 -250331805 + L1MD1 LINE L1 3050 4579 -1961 594 120 40 0 chr2 356049 356149 -250331705 + MLT1B LTR MaLR 1 104 -286 300 295 0 42 chr2 356178 356273 -250331581 - Tigger7 DNA MER2_type -8 2479 2389 * 1210 238 15 8 chr2 356271 356536 -250331318 - Tigger7 DNA MER2_type -466 267 1 * 1302 161 25 84 chr2 356536 356846 -250331008 + MLT1B LTR MaLR 100 390 0 2005 270 36 8 chr2 356846 357568 -250330286 + L1MD1 LINE L1 4575 5316 -1224 2040 237 63 38 chr2 357578 358511 -250329343 + L1MD1 LINE L1 5358 6390 -246 267 103 0 0 chr2 358511 358550 -250329304 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2040 237 63 38 chr2 358550 358804 -250329050 + L1MD1 LINE L1 6390 6636 0 426 368 96 15 chr2 358965 359237 -250328617 + HAL1 LINE L1 32 325 -2182 475 256 144 6 chr2 359298 359458 -250328396 + MER5A DNA MER1_type 8 189 0 247 326 259 0 chr2 359554 359701 -250328153 - MER5A DNA MER1_type -1 188 4 414 286 36 0 chr2 359710 359850 -250328004 - MER5B DNA MER1_type -23 155 11 323 305 55 8 chr2 359851 359979 -250327875 + HAL1 LINE L1 476 609 -1898 228 300 90 0 chr2 361387 361487 -250326367 - LTR33A LTR ERVL -14 509 401 854 275 43 39 chr2 361770 362253 -250325601 - HAL1 LINE L1 -954 1553 1069 750 163 24 36 chr2 362259 362425 -250325429 + MER53 DNA DNA 1 164 -25 720 291 171 71 chr2 362430 363206 -250324648 - HAL1 LINE L1 -1399 1108 255 2232 121 129 5 chr2 363515 363896 -250323958 - MSTA LTR MaLR 0 428 1 2390 190 95 15 chr2 365631 366178 -250321676 + LTR59 LTR ERV1 1 591 -6 370 326 62 31 chr2 366826 367050 -250320804 - L3 LINE CR1 -730 847 617 225 188 42 0 chr2 367598 367646 -250320208 + MLT1I LTR MaLR 320 369 -40 221 321 107 13 chr2 368983 369142 -250318712 + MIR SINE MIR 21 194 -68 390 226 0 0 chr2 369337 369443 -250318411 + (TG)n Simple_repeat Simple_repeat 1 106 0 2650 214 97 6 chr2 369559 370196 -250317658 + MER44D DNA MER2_type 2 696 -9 192 306 0 0 chr2 370399 370448 -250317406 + L2 LINE L2 3261 3309 -4 183 129 0 0 chr2 370805 370836 -250317018 + (TCCA)n Simple_repeat Simple_repeat 3 33 0 530 115 36 24 chr2 370853 371018 -250316836 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 21 0 0 0 chr2 372629 372650 -250315204 + AT_rich Low_complexity Low_complexity 1 21 0 485 121 77 0 chr2 373047 373138 -250314716 - L1PA13 LINE L1 0 6163 6066 195 375 0 0 chr2 373631 373695 -250314159 + L2 LINE L2 3206 3269 -3 282 29 0 0 chr2 373775 373810 -250314044 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 292 319 113 12 chr2 375378 375538 -250312316 + MER5A DNA MER1_type 1 176 -13 296 336 64 0 chr2 375556 375681 -250312173 - L3 LINE CR1 -156 1421 1289 2443 174 54 19 chr2 377179 377645 -250310209 + MER49 LTR ERV1 441 922 -1 1019 285 67 86 chr2 379159 380355 -250307499 + L1MEc LINE L1 1309 2630 -3933 2278 212 19 24 chr2 380361 380542 -250307312 + L1 LINE L1 4695 4875 -1271 3418 82 14 0 chr2 380542 380980 -250306874 + MLT2A1 LTR ERVL 1 444 0 2278 212 19 24 chr2 380980 381373 -250306481 + L1 LINE L1 4875 5266 -880 1621 166 65 9 chr2 381473 381798 -250306056 - MER49 LTR ERV1 -580 343 1 198 103 0 0 chr2 382861 382890 -250304964 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 361 24 0 chr2 384045 384128 -250303726 + MIR SINE MIR 26 110 -152 352 265 66 22 chr2 385857 385993 -250301861 - L1ME4a LINE L1 -5 6116 5975 245 304 173 20 chr2 386162 386520 -250301334 - L1ME4a LINE L1 -382 5739 5327 40 67 0 0 chr2 386520 386595 -250301259 + AT_rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 387236 387267 -250300587 + AT_rich Low_complexity Low_complexity 1 31 0 601 307 116 59 chr2 387366 387937 -250299917 + HAL1b LINE L1 567 902 -944 344 331 180 0 chr2 387938 388110 -250299744 + HAL1b LINE L1 939 1141 -705 702 260 83 56 chr2 388202 388541 -250299313 + L1M4 LINE L1 2932 3279 -2867 398 328 43 14 chr2 388773 389194 -250298660 + L1M4 LINE L1 4724 5156 -990 2962 253 59 30 chr2 389258 390347 -250297507 + L1MB7 LINE L1 382 1501 -5041 1260 216 88 15 chr2 390347 390676 -250297178 - MLT1A1 LTR MaLR -3 362 10 1626 241 50 8 chr2 390694 391076 -250296778 - MLT1A1-int LTR MaLR -8 1727 1330 418 174 0 0 chr2 391244 391313 -250296541 - MLT1A1-int LTR MaLR -988 747 679 2788 206 16 21 chr2 391445 392026 -250295828 - MLT1A1-int LTR MaLR -1078 657 80 621 247 70 0 chr2 392128 392314 -250295540 + L1MB7 LINE L1 5153 5351 -1293 1699 227 118 12 chr2 392328 392830 -250295024 + L1MB7 LINE L1 6055 6609 -73 4926 208 25 6 chr2 392875 393963 -250293891 + L1PA15 LINE L1 1281 2399 -4398 * 5045 164 37 25 chr2 393952 395681 -250292173 + L1PA15 LINE L1 5082 6816 0 276 125 0 54 chr2 395695 395751 -250292103 + L1MB8 LINE L1 6125 6177 -1 2089 108 0 0 chr2 395759 396047 -250291807 + AluSg SINE Alu 1 288 -22 454 197 57 16 chr2 396055 396177 -250291677 + L1MC4a LINE L1 5365 5491 -2317 1039 270 48 64 chr2 396294 396809 -250291045 + L1MC4a LINE L1 5481 5987 -1821 365 278 81 73 chr2 396987 397260 -250290594 + L1MC4a LINE L1 6166 6440 -1368 294 165 18 49 chr2 397876 398040 -250289814 + GA-rich Low_complexity Low_complexity 2 160 0 259 273 112 56 chr2 398892 399053 -250288801 - L2 LINE L2 -18 3295 3126 443 272 180 22 chr2 399163 399663 -250288191 - L2 LINE L2 -338 2976 2398 340 231 204 0 chr2 400035 400143 -250287711 - L2 LINE L2 -908 2406 2277 48 0 0 0 chr2 401303 401351 -250286503 + AT_rich Low_complexity Low_complexity 1 48 0 699 219 44 61 chr2 401916 402144 -250285710 - L1MC1 LINE L1 0 6333 6110 23 33 0 0 chr2 402517 402547 -250285307 + AT_rich Low_complexity Low_complexity 1 30 0 384 121 0 0 chr2 402572 402630 -250285224 - MADE1 DNA Mariner -2 78 21 185 367 52 29 chr2 404700 404910 -250282944 + L2 LINE L2 2107 2321 -993 184 235 62 49 chr2 407269 407350 -250280504 + L3b LINE CR1 1243 1324 -259 1180 203 37 37 chr2 410255 410365 -250277489 - L1MC2 LINE L1 -1 6343 6234 2270 92 0 0 chr2 410365 410668 -250277186 - AluY SINE Alu -8 303 1 1180 203 37 37 chr2 410668 410878 -250276976 - L1MC2 LINE L1 -109 6235 6023 * 3474 218 121 38 chr2 410875 411742 -250276112 - L1MCb LINE L1 -4509 2055 1261 2009 110 0 7 chr2 411742 412024 -250275830 + AluSx SINE Alu 1 280 -32 351 0 0 0 chr2 412026 412065 -250275789 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3474 218 121 38 chr2 412065 412840 -250275014 - L1MCb LINE L1 -5303 1261 216 2579 128 5 3 chr2 412840 413214 -250274640 + THE1C LTR MaLR 1 375 0 3474 218 121 38 chr2 413214 413448 -250274406 - L1MCb LINE L1 -6348 216 3 2056 107 0 0 chr2 415314 415618 -250272236 - AluSg SINE Alu 0 304 1 203 402 20 10 chr2 415630 415732 -250272122 + MIR SINE MIR 18 120 -142 199 261 204 23 chr2 416217 416305 -250271549 + L2 LINE L2 3209 3312 -1 204 280 0 0 chr2 416415 416465 -250271389 + L2 LINE L2 3229 3278 -35 406 266 129 0 chr2 418012 418136 -250269718 - MIR SINE MIR -5 257 118 226 307 118 24 chr2 419404 419531 -250268323 - MIR3 SINE MIR -67 141 3 359 229 72 0 chr2 420424 420507 -250267347 + MER58B DNA MER1_type 237 325 -16 397 55 58 58 chr2 421990 422343 -250265511 + (TG)n Simple_repeat Simple_repeat 1 353 0 483 45 62 57 chr2 422419 422596 -250265258 + (TG)n Simple_repeat Simple_repeat 1 178 0 218 266 112 71 chr2 422981 423150 -250264704 + MIR SINE MIR 8 183 -79 710 307 82 46 chr2 425585 426378 -250261476 - L1MEc LINE L1 -3537 2678 1895 263 344 67 5 chr2 426413 426608 -250261246 - L1MEc LINE L1 -4596 1800 1594 181 43 0 0 chr2 429642 429665 -250258189 - MIR SINE MIR -117 145 123 233 220 20 0 chr2 431715 431765 -250256089 + L3 LINE CR1 1242 1292 -285 201 372 73 3 chr2 433289 433467 -250254387 + MIR SINE MIR 12 203 -59 8355 143 39 6 chr2 434475 434536 -250253318 + L1MA3 LINE L1 3622 3680 -2625 528 59 0 0 chr2 434536 434604 -250253250 + (GAA)n Simple_repeat Simple_repeat 2 69 0 8355 143 39 6 chr2 434604 437136 -250250718 + L1MA3 LINE L1 3680 6305 0 252 379 91 26 chr2 439057 439321 -250248533 - L2 LINE L2 -27 3245 2965 261 325 78 48 chr2 439619 439887 -250247967 - L2 LINE L2 -489 2825 2550 336 290 6 56 chr2 439922 440084 -250247770 - L1ME2 LINE L1 -9 6155 6002 * 621 333 47 15 chr2 440074 440162 -250247692 - L1M4 LINE L1 -2479 3667 3583 1682 184 42 0 chr2 440162 440450 -250247404 - AluJb SINE Alu -12 300 1 621 333 47 15 chr2 440450 440764 -250247090 - L1M4 LINE L1 -2563 3583 3252 * 2217 250 51 22 chr2 440746 441577 -250246277 - L1MC3 LINE L1 -749 5397 5170 699 284 59 6 chr2 441639 441977 -250245877 - L1MC3 LINE L1 -2661 3485 3130 620 144 68 7 chr2 441984 442130 -250245724 + L1MA7 LINE L1 6130 6284 -7 319 319 42 0 chr2 442135 442301 -250245553 + L1ME3A LINE L1 5107 5279 -867 693 302 99 29 chr2 442436 442993 -250244861 + L1ME3A LINE L1 5354 5949 -221 328 203 27 0 chr2 442994 443068 -250244786 + L1MA8 LINE L1 6209 6284 -7 2174 108 0 51 chr2 443109 443425 -250244429 - AluSg SINE Alu -10 300 1 373 303 128 0 chr2 444137 444325 -250243529 + MER58C DNA MER1_type 1 212 -3 379 314 78 31 chr2 444971 445264 -250242590 + L1MC/D LINE L1 5501 5807 -2001 209 233 0 0 chr2 448477 448520 -250239334 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 280 86 0 chr2 449199 449292 -250238562 + MER3 DNA MER1_type 79 179 -30 232 337 53 63 chr2 450223 450413 -250237441 - MIR SINE MIR -50 212 25 184 146 24 49 chr2 450781 450822 -250237032 + MER5B DNA MER1_type 124 163 -15 228 69 92 11 chr2 451573 451660 -250236194 + (TG)n Simple_repeat Simple_repeat 2 95 0 2545 111 14 0 chr2 452537 452896 -250234958 + THE1B LTR MaLR 1 364 0 663 300 55 40 chr2 454626 455026 -250232828 + MLT2D LTR ERVL 9 414 0 1606 201 57 52 chr2 458352 458759 -250229095 + LTR2 LTR ERV1 41 449 0 225 0 0 0 chr2 462723 462748 -250225106 + (T)n Simple_repeat Simple_repeat 1 25 0 371 329 150 31 chr2 462848 463207 -250224647 - L1M4 LINE L1 -1097 5049 4648 684 287 59 53 chr2 463253 463374 -250224480 - L1M4 LINE L1 -1635 4511 4392 6207 58 17 18 chr2 463374 464155 -250223699 - LTR17 LTR ERV1 0 780 1 684 287 59 53 chr2 464155 464709 -250223145 - L1M4 LINE L1 -1754 4392 3832 531 276 104 21 chr2 464705 465089 -250222765 - L1M4 LINE L1 -3529 2617 2202 * 3251 110 69 6 chr2 465767 466248 -250221606 + MER9 LTR ERVK 1 511 0 185 371 0 0 chr2 467320 467382 -250220472 + L2 LINE L2 3005 3066 -206 23 0 0 0 chr2 469252 469275 -250218579 + AT_rich Low_complexity Low_complexity 1 23 0 972 124 0 0 chr2 470235 470364 -250217490 + AluSq/x SINE Alu 1 129 -183 416 296 85 0 chr2 472381 472570 -250215284 - MER92B LTR ERV1 -421 215 11 2773 141 20 50 chr2 472668 473229 -250214625 - Tigger3(Golem) DNA MER2_type -1 3028 2485 261 182 0 0 chr2 473330 473385 -250214469 + GA-rich Low_complexity Low_complexity 4 58 0 704 184 101 10 chr2 473475 473682 -250214172 - MER33 DNA MER1_type -48 276 51 2351 92 0 13 chr2 474192 474496 -250213358 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 475850 475878 -250211976 + GC_rich Low_complexity Low_complexity 1 28 0 195 69 0 0 chr2 475904 475933 -250211921 + (CGGGG)n Simple_repeat Simple_repeat 5 33 0 409 247 54 75 chr2 479866 480052 -250207802 + MER58C DNA MER1_type 28 209 -6 591 129 0 0 chr2 480901 480986 -250206868 + AluSg/x SINE Alu 208 292 -18 303 288 55 43 chr2 481834 481997 -250205857 - L2 LINE L2 -491 2823 2659 288 295 98 16 chr2 482048 482292 -250205562 + L1M4 LINE L1 2994 3257 -2889 24 32 0 0 chr2 482357 482388 -250205466 + AT_rich Low_complexity Low_complexity 1 31 0 426 333 56 59 chr2 482545 482833 -250205021 + L1MEc LINE L1 2099 2385 -4011 439 253 120 71 chr2 483072 483440 -250204414 - L1 LINE L1 -3126 3020 2635 282 260 153 45 chr2 483605 483913 -250203941 + L1M4 LINE L1 3884 4224 -1922 460 346 93 12 chr2 483962 484219 -250203635 + L1M4 LINE L1 4483 4760 -1386 306 129 32 32 chr2 484473 484597 -250203257 + (TTAA)n Simple_repeat Simple_repeat 4 127 0 266 332 45 31 chr2 484751 485040 -250202814 + MER97c DNA MER1_type? 781 1073 -17 246 141 54 11 chr2 485217 485309 -250202545 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 350 137 99 19 chr2 485335 485496 -250202358 + (TAGA)n Simple_repeat Simple_repeat 2 175 0 195 119 34 34 chr2 485569 485628 -250202226 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 2054 156 6 22 chr2 488738 489059 -250198795 - MER1B DNA MER1_type -23 316 1 860 203 183 40 chr2 489059 489308 -250198546 - Tigger3(Golem) DNA MER2_type -2741 288 4 218 306 9 4 chr2 490453 490689 -250197165 + (CA)n Simple_repeat Simple_repeat 1 237 0 269 309 6 0 chr2 490741 490916 -250196938 + (CATA)n Simple_repeat Simple_repeat 2 177 0 434 263 6 0 chr2 490932 491092 -250196762 + (CA)n Simple_repeat Simple_repeat 2 162 0 307 250 14 0 chr2 492699 492771 -250195083 - MER69 DNA AcHobo 0 2526 2454 209 301 88 18 chr2 496509 496622 -250191232 - MIR SINE MIR -60 148 28 1378 139 8 36 chr2 496622 496874 -250190980 + AluJb SINE Alu 58 302 -10 340 270 63 8 chr2 497081 497207 -250190647 + MLT1I LTR MaLR 270 402 -7 864 206 73 5 chr2 501418 501636 -250186218 - L1MA5A LINE L1 -1 6296 6064 253 319 66 58 chr2 502277 502491 -250185363 - L1M4 LINE L1 -1548 4598 4387 2490 48 0 0 chr2 502491 502802 -250185052 + AluYa5 SINE Alu 1 311 0 253 319 66 58 chr2 502802 503039 -250184815 - L1M4 LINE L1 -1759 4387 4143 538 262 117 41 chr2 504425 504917 -250182937 - L1MDa LINE L1 -4511 2029 1543 745 283 125 69 chr2 505150 505758 -250182096 - L1MDa LINE L1 -5426 1104 463 197 305 84 21 chr2 505794 505889 -250181965 - MIR SINE MIR -91 171 71 2695 101 3 3 chr2 506200 506575 -250181279 + THE1C LTR MaLR 1 375 0 1567 234 39 8 chr2 507492 507856 -250179998 - MLT1B LTR MaLR -15 375 1 281 274 89 24 chr2 508033 508157 -250179697 + MIR SINE MIR 117 248 -14 1618 139 204 38 chr2 508355 508722 -250179132 + MSTA LTR MaLR 1 428 0 7593 171 40 67 chr2 508722 510417 -250177437 + THE1B-int LTR MaLR 1 1649 -2 1698 161 75 32 chr2 510425 510772 -250177082 + THE1B LTR MaLR 1 362 -2 198 0 0 0 chr2 511225 511247 -250176607 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 884 222 13 3 chr2 511679 511994 -250175860 - MSTD LTR MaLR 0 396 1 403 233 78 0 chr2 512519 512635 -250175219 + MLT1D LTR MaLR 381 505 0 1927 110 10 52 chr2 512759 513067 -250174787 + AluSg SINE Alu 1 295 -15 188 132 0 26 chr2 516398 516436 -250171418 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 432 285 75 5 chr2 516863 517063 -250170791 + MER20 DNA MER1_type 6 219 0 1832 143 62 20 chr2 517738 518095 -250169759 + THE1C LTR MaLR 1 372 -3 24 32 0 0 chr2 518976 519007 -250168847 + AT_rich Low_complexity Low_complexity 1 31 0 407 307 72 23 chr2 521147 521411 -250166443 - L1ME4a LINE L1 -295 5826 5550 241 272 48 0 chr2 521482 521607 -250166247 - L1ME4a LINE L1 -2350 5458 5328 235 200 36 0 chr2 521769 521824 -250166030 - LTR40b LTR ERVL -2 460 404 281 365 11 11 chr2 523573 523751 -250164103 + (CA)n Simple_repeat Simple_repeat 2 179 0 2206 92 0 7 chr2 523926 524229 -250163625 - AluSx SINE Alu -11 301 1 2718 208 69 60 chr2 525573 526328 -250161526 - L1MC1 LINE L1 -1 6332 5571 828 151 0 0 chr2 526328 526474 -250161380 + CT-rich Low_complexity Low_complexity 3 148 0 506 190 8 0 chr2 526968 527089 -250160765 + GA-rich Low_complexity Low_complexity 3 124 0 222 37 0 0 chr2 527688 527715 -250160139 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 430 301 47 21 chr2 528439 528828 -250159026 + L1MEc LINE L1 1371 1823 -753 737 240 179 28 chr2 529046 529371 -250158483 + MLT1B LTR MaLR 1 374 -16 205 162 0 101 chr2 529475 529574 -250158280 + A-rich Low_complexity Low_complexity 2 90 0 434 281 42 32 chr2 530066 530578 -250157276 - MLT1G1 LTR MaLR -2 593 2 187 246 33 0 chr2 531053 531114 -250156740 + L2 LINE L2 3028 3090 -223 228 193 53 0 chr2 531311 531368 -250156486 - MIR SINE MIR -79 183 124 555 273 88 10 chr2 531723 531917 -250155937 - L1PB4 LINE L1 -6 6150 5942 219 264 31 92 chr2 532446 532609 -250155245 - L2 LINE L2 -52 3261 3109 584 135 19 19 chr2 534355 534459 -250153395 + L1MA4 LINE L1 6197 6300 0 214 294 29 0 chr2 539172 539240 -250148614 + CT-rich Low_complexity Low_complexity 3 72 0 346 264 36 43 chr2 539453 539476 -250148378 - L1M4 LINE L1 -3619 2527 2505 2278 188 43 8 chr2 539476 539945 -250147909 - MER66B LTR ERV1 -1 485 1 346 264 36 43 chr2 539945 540061 -250147793 - L1M4 LINE L1 -3641 2505 2389 258 248 152 41 chr2 540108 540253 -250147601 - L1P LINE L1 -3839 2307 2147 44 20 0 0 chr2 540864 540915 -250146939 + AT_rich Low_complexity Low_complexity 1 51 0 717 224 108 108 chr2 540915 541163 -250146691 - L1MC5 LINE L1 -79 7882 7635 2175 128 0 0 chr2 541163 541459 -250146395 - AluSx SINE Alu -16 296 1 717 224 108 108 chr2 541459 541847 -250146007 - L1MC5 LINE L1 -325 7636 7246 26 50 0 0 chr2 542132 542172 -250145682 + AT_rich Low_complexity Low_complexity 1 40 0 1211 166 67 9 chr2 543025 543248 -250144606 + MER46A DNA MER2_type 1 236 0 1670 221 195 44 chr2 543536 544289 -250143565 - Charlie1a DNA MER1_type -34 1421 555 273 283 146 34 chr2 544385 544618 -250143236 - Charlie1a DNA MER1_type -1054 401 143 657 236 28 34 chr2 544674 544852 -250143002 - Charlie1a DNA MER1_type -1277 178 2 239 212 26 13 chr2 544883 544991 -250142863 - L1P LINE L1 -2364 3782 3672 308 268 132 64 chr2 545615 545880 -250141974 - L1MEc LINE L1 -3188 3376 3094 214 175 35 18 chr2 546469 546526 -250141328 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 361 296 103 57 chr2 546909 547277 -250140577 - L1MEc LINE L1 -4751 1994 1610 22 56 0 0 chr2 552715 552751 -250135103 + AT_rich Low_complexity Low_complexity 1 36 0 772 182 0 0 chr2 553847 553990 -250133864 + MER52A LTR ERV1 1613 1755 0 1818 164 125 3 chr2 554177 554536 -250133318 + MER57A LTR ERV1 1 403 0 3484 233 81 22 chr2 558138 559193 -250128661 - L1MC3 LINE L1 -166 7619 6503 2196 257 44 28 chr2 559181 559982 -250127872 - L1MCb LINE L1 -3034 3530 2717 * 1081 237 59 75 chr2 560008 560701 -250127153 - L1MCb LINE L1 -4849 1196 704 281 342 35 0 chr2 560758 560986 -250126868 + L1ME LINE L1 3340 3575 -2571 1198 94 0 0 chr2 560988 561148 -250126706 - L1PA7 LINE L1 -390 5764 5605 2959 60 5 21 chr2 561148 561546 -250126308 + L1PA7 LINE L1 5763 6158 0 896 282 119 31 chr2 561759 562642 -250125212 + L1ME LINE L1 3847 4807 -1339 589 190 0 0 chr2 562691 562812 -250125042 - L1PB1 LINE L1 -1588 4558 4438 * 5853 147 83 1 chr2 562808 563400 -250124454 + L1PB1 LINE L1 4553 5095 -1056 6075 71 84 14 chr2 563400 563474 -250124380 + L1PA8 LINE L1 5254 5321 -851 2343 92 0 38 chr2 563474 563611 -250124243 + AluSx SINE Alu 1 142 -170 3173 201 23 91 chr2 563611 564651 -250123203 - LTR5 LTR ERVK 0 969 1 2343 92 0 38 chr2 564651 564830 -250123024 + AluSx SINE Alu 142 305 -7 6075 71 84 14 chr2 564830 565610 -250122244 + L1PA8 LINE L1 5321 6168 -4 5853 147 83 1 chr2 565610 566471 -250121383 + L1PB1 LINE L1 5095 6143 -8 589 308 78 30 chr2 566834 567195 -250120659 + L1ME LINE L1 5276 5653 -509 242 285 85 8 chr2 567742 567872 -250119982 + L2 LINE L2 2154 2293 -1021 188 337 79 34 chr2 567985 568163 -250119691 + L2 LINE L2 3128 3313 0 1870 224 55 60 chr2 570247 570886 -250116968 - L1MB3 LINE L1 -14 6169 5534 303 286 7 82 chr2 571341 571488 -250116366 - L1M3 LINE L1 -586 5585 5450 1519 199 36 28 chr2 571593 571955 -250115899 + MLT1A1 LTR MaLR 1 365 0 298 333 27 0 chr2 572154 572265 -250115589 - L1MC5 LINE L1 -50 7911 7798 2264 261 72 42 chr2 572317 573392 -250114462 - L1M3 LINE L1 -2180 3966 2860 200 206 95 0 chr2 776065 776128 -249911726 - L2 LINE L2 -7 3306 3238 2565 37 0 0 chr2 776587 776885 -249910969 - AluY SINE Alu -13 298 1 300 203 40 0 chr2 776886 776960 -249910894 - MER69 DNA AcHobo -2370 156 80 27 0 0 0 chr2 777426 777453 -249910401 + AT_rich Low_complexity Low_complexity 1 27 0 663 168 19 0 chr2 777971 778078 -249909776 - FLAM_C SINE Alu -33 110 2 416 298 21 47 chr2 778726 778917 -249908937 + MER3 DNA MER1_type 24 209 0 335 323 168 0 chr2 778934 779089 -249908765 + MER5A DNA MER1_type 6 186 -3 212 306 72 39 chr2 780769 780949 -249906905 + L2 LINE L2 3083 3268 -4 204 289 0 19 chr2 780939 780991 -249906863 + MER5A DNA MER1_type 137 187 -2 * 1375 220 18 23 chr2 782165 782525 -249905329 - MLT1F LTR MaLR -81 461 15 477 335 24 0 chr2 782542 782706 -249905148 - MLT1F LTR MaLR -365 177 10 198 288 0 30 chr2 782801 782867 -249904987 - L2 LINE L2 -10 3262 3199 367 296 128 24 chr2 783101 783561 -249904293 - MLT1E LTR MaLR 0 593 13 948 149 0 0 chr2 783666 783807 -249904047 - FRAM SINE Alu -17 159 19 341 282 35 14 chr2 787236 787378 -249900476 + MIR3 SINE MIR 39 183 -25 311 174 149 8 chr2 787755 787876 -249899978 + L1M3 LINE L1 5707 5844 -339 398 318 26 75 chr2 788122 788209 -249899645 - L2 LINE L2 -61 3252 3162 2273 75 0 0 chr2 788209 788491 -249899363 - AluSp SINE Alu -23 290 9 398 318 26 75 chr2 788491 788752 -249899102 - L2 LINE L2 -151 3162 2921 2320 97 0 0 chr2 789001 789310 -249898544 - AluSx SINE Alu -3 309 1 2193 102 0 16 chr2 789489 789626 -249898228 + AluSx SINE Alu 1 139 -173 2112 98 0 29 chr2 789626 789933 -249897921 + AluSg SINE Alu 1 298 -12 2193 102 0 16 chr2 789933 790108 -249897746 + AluSx SINE Alu 139 308 -4 565 305 158 10 chr2 790115 790508 -249897346 - L2 LINE L2 -770 2544 2094 943 154 46 6 chr2 790954 791129 -249896725 - MER20 DNA MER1_type -1 218 37 939 223 79 48 chr2 791225 791580 -249896274 + MER69 DNA AcHobo 1919 2284 -242 2188 98 3 13 chr2 791587 791894 -249895960 + AluY SINE Alu 1 304 -7 313 91 0 106 chr2 791938 792004 -249895850 - L1MD1 LINE L1 0 6242 6184 3138 236 55 15 chr2 792011 792458 -249895396 - L1MD1 LINE L1 -86 6156 5728 1379 97 111 0 chr2 792458 792665 -249895189 - MER30 DNA MER1_type 0 230 1 3138 236 55 15 chr2 792665 792789 -249895065 - L1MD1 LINE L1 -514 5728 5610 2173 104 3 3 chr2 792789 793098 -249894756 - AluSc SINE Alu 0 309 1 3138 236 55 15 chr2 793098 793840 -249894014 - L1MD1 LINE L1 -632 5610 4789 2213 83 7 0 chr2 796029 796318 -249891536 - AluY SINE Alu -19 292 2 256 197 15 15 chr2 797356 797422 -249890432 + G-rich Low_complexity Low_complexity 2 67 0 337 349 54 12 chr2 798064 798230 -249889624 - L3 LINE CR1 -213 1364 1192 412 219 8 55 chr2 798361 798489 -249889365 + MLT1A2 LTR MaLR 19 140 -234 2264 103 0 3 chr2 798867 799178 -249888676 - AluSq SINE Alu -3 310 1 822 173 0 0 chr2 799970 800103 -249887751 + FLAM_C SINE Alu 1 133 0 1804 176 0 3 chr2 800787 800965 -249886889 - AluJo SINE Alu 0 312 134 2299 92 0 0 chr2 800965 801259 -249886595 - AluSq SINE Alu -19 294 1 1804 176 0 3 chr2 801259 801393 -249886461 - AluJo SINE Alu -178 134 1 382 277 54 81 chr2 802250 802510 -249885344 - HAL1 LINE L1 -953 1554 1302 381 248 0 0 chr2 803435 803548 -249884306 + (CA)n Simple_repeat Simple_repeat 1 113 0 189 0 0 0 chr2 803774 803795 -249884059 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 183 318 0 0 chr2 804534 804597 -249883257 - MIR SINE MIR -136 126 64 258 290 131 42 chr2 804636 804836 -249883018 + L1MC/D LINE L1 5600 5830 -1978 1797 155 17 3 chr2 804836 805132 -249882722 + AluJo SINE Alu 1 300 -12 258 290 131 42 chr2 805132 805190 -249882664 + L1MC/D LINE L1 5830 5881 -1927 301 283 5 81 chr2 805298 805496 -249882358 - L1MCa LINE L1 -4361 2065 1883 1314 224 50 42 chr2 805530 805888 -249881966 - MLT1A1 LTR MaLR -4 361 1 1291 131 143 20 chr2 806021 806273 -249881581 - AluJo SINE Alu -29 283 1 2318 100 0 0 chr2 806505 806814 -249881040 - AluSx SINE Alu -3 309 1 256 276 188 33 chr2 807209 807390 -249880464 - MIR SINE MIR -16 246 38 212 292 156 0 chr2 808605 808701 -249879153 - MIR SINE MIR -79 183 73 274 252 44 74 chr2 809239 809374 -249878480 - MIR SINE MIR -62 146 16 1089 0 0 0 chr2 810201 810322 -249877532 + (CA)n Simple_repeat Simple_repeat 1 121 0 183 42 0 0 chr2 810322 810346 -249877508 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 2393 208 60 19 chr2 811682 812102 -249875752 + MER6A DNA MER2_type -10 439 -426 2550 40 0 0 chr2 812102 812402 -249875452 + AluY SINE Alu 1 300 -11 2393 208 60 19 chr2 812402 812555 -249875299 + MER6A DNA MER2_type 439 584 -21 326 333 32 0 chr2 812696 812819 -249875035 - MIR SINE MIR -53 209 83 225 65 0 0 chr2 814309 814340 -249873514 + (TG)n Simple_repeat Simple_repeat 1 31 0 1501 205 59 38 chr2 815201 815733 -249872121 - LTR40a LTR ERVL 0 519 31 705 295 146 35 chr2 815887 816008 -249871846 + MLT1F LTR MaLR 1 107 -435 1893 180 40 30 chr2 816008 816436 -249871418 + MSTB1 LTR MaLR 1 432 0 705 295 146 35 chr2 816436 816802 -249871052 + MLT1F LTR MaLR 107 542 0 770 134 30 37 chr2 816803 816937 -249870917 + FLAM_A SINE Alu 1 133 0 1858 155 0 29 chr2 818478 818788 -249869066 + AluJb SINE Alu 1 301 -11 2267 172 46 0 chr2 819908 820321 -249867533 + MSTB1 LTR MaLR 1 432 0 1929 209 92 20 chr2 820394 820905 -249866949 - LTR10A LTR ERV1 -61 548 1 245 292 73 51 chr2 820936 821073 -249866781 + MIR SINE MIR 14 153 -109 1327 278 89 47 chr2 821644 822242 -249865612 - MLT1E2 LTR MaLR 0 626 4 374 219 42 25 chr2 822477 822596 -249865258 - L1MA4A LINE L1 -1 6302 6182 631 233 8 0 chr2 822632 822765 -249865089 + MER58 DNA MER1_type 116 249 -92 4079 96 28 7 chr2 822924 823487 -249864367 + L1PA11 LINE L1 5600 6174 0 716 249 79 0 chr2 823726 823903 -249863951 + MER3 DNA MER1_type 3 193 -16 1935 164 3 3 chr2 824493 824792 -249863062 + AluJo SINE Alu 1 299 -13 23 33 0 0 chr2 824902 824932 -249862922 + AT_rich Low_complexity Low_complexity 1 30 0 4155 73 15 0 chr2 825200 825745 -249862109 - L1PA10 LINE L1 0 6168 5616 1296 262 46 19 chr2 827196 827627 -249860227 - LTR47B LTR ERVL 0 443 1 659 208 82 76 chr2 828610 828927 -249858927 + MER5C DNA MER1_type 5 323 -1 2499 32 0 0 chr2 829211 829520 -249858334 - AluY SINE Alu 0 310 2 3911 198 51 1 chr2 830085 830449 -249857405 - L1MB8 LINE L1 0 6178 5833 1351 125 83 5 chr2 830449 830665 -249857189 + MER46A DNA MER2_type 2 234 -2 3911 198 51 1 chr2 830665 831110 -249856744 - L1MB8 LINE L1 -345 5833 5329 2654 58 52 14 chr2 831125 831487 -249856367 - L1PB1 LINE L1 -7 7563 7188 777 93 0 19 chr2 831503 831611 -249856243 - L1MA2 LINE L1 -9 6295 6190 10434 156 34 22 chr2 831613 831952 -249855902 - L1PB1 LINE L1 -502 7217 6884 1238 124 180 141 chr2 831952 832363 -249855491 - MSTA LTR MaLR -1 427 1 10434 156 34 22 chr2 832363 834468 -249853386 - L1PB1 LINE L1 -835 6884 4738 5101 193 47 6 chr2 835758 836974 -249850880 - L1PB1 LINE L1 -2826 4739 3462 210 71 0 0 chr2 836974 837002 -249850852 + (CCCCCT)n Simple_repeat Simple_repeat 3 30 0 324 303 66 9 chr2 837234 837445 -249850409 - L1MEd LINE L1 -5306 813 591 24 67 0 0 chr2 838742 838787 -249849067 + AT_rich Low_complexity Low_complexity 1 45 0 237 178 0 0 chr2 838880 838925 -249848929 + (TG)n Simple_repeat Simple_repeat 2 46 0 301 270 72 18 chr2 839166 839277 -249848577 + MIR SINE MIR 28 144 -118 460 296 35 7 chr2 839826 839968 -249847886 + Charlie8 DNA MER1_type 25 170 -2247 371 214 56 0 chr2 841598 841687 -249846167 + MIR SINE MIR 97 190 -72 416 54 36 0 chr2 842483 842539 -249845315 + L1P4 LINE L1 5423 5480 -685 2382 101 18 3 chr2 842549 842887 -249844967 - L1PA11 LINE L1 -2 6172 5830 3443 121 107 10 chr2 842887 843470 -249844384 - L1PA16 LINE L1 -67 6099 5460 3098 79 2 7 chr2 843469 843885 -249843969 + L1PA11 LINE L1 5467 5880 -294 * 286 270 149 29 chr2 843968 844142 -249843712 - L1ME LINE L1 -299 5822 5628 1528 142 130 15 chr2 844737 844998 -249842856 + AluJo SINE Alu 1 291 -21 299 280 0 30 chr2 845980 846080 -249841774 + L1ME LINE L1 5691 5787 -334 227 202 11 85 chr2 846130 846224 -249841630 + MIR SINE MIR 176 262 0 369 268 83 57 chr2 847288 847639 -249840215 - L1ME4a LINE L1 -21 6100 5741 270 295 54 0 chr2 847644 847756 -249840098 - L1ME4a LINE L1 -525 5596 5479 303 28 0 0 chr2 847930 847966 -249839888 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 590 263 205 16 chr2 848080 848392 -249839462 - L2 LINE L2 -9 3304 2934 274 265 0 0 chr2 848464 848532 -249839322 - L2 LINE L2 -681 2633 2566 661 276 167 13 chr2 848537 849077 -249838777 - L2 LINE L2 -1123 2191 1569 1205 162 31 13 chr2 849091 849319 -249838535 - L1MB7 LINE L1 -218 5966 5735 459 339 90 42 chr2 849576 850537 -249837317 + L2 LINE L2 2252 3272 0 4625 190 45 25 chr2 850688 851367 -249836487 - L1M1 LINE L1 -4065 1263 599 1920 156 0 32 chr2 851367 851675 -249836179 - AluJb SINE Alu -14 298 1 4625 190 45 25 chr2 851675 852379 -249835475 - L1M1 LINE L1 -4729 599 727 1448 132 32 0 chr2 852379 852599 -249835255 + MER30 DNA MER1_type 3 229 -1 4625 190 45 25 chr2 852599 852908 -249834946 - L1M1 LINE L1 -4600 728 426 577 292 85 30 chr2 852899 853135 -249834719 - L1M4b LINE L1 -6296 563 315 * 845 197 82 52 chr2 853158 853391 -249834463 - L1M4b LINE L1 -6610 249 10 294 313 17 17 chr2 853669 853784 -249834070 + L2 LINE L2 3188 3302 -11 189 277 43 0 chr2 853792 853839 -249834015 - L2 LINE L2 -87 3185 3137 2158 85 0 11 chr2 853850 854131 -249833723 + AluSq SINE Alu 36 313 0 22 56 0 0 chr2 854926 854962 -249832892 + AT_rich Low_complexity Low_complexity 1 36 0 380 279 72 86 chr2 855284 855728 -249832126 - L2 LINE L2 -5 3308 2871 468 51 0 0 chr2 857722 857781 -249830073 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2173 112 3 0 chr2 857781 858077 -249829777 - AluSx SINE Alu -15 297 1 2232 99 7 3 chr2 858081 858375 -249829479 - AluSx SINE Alu -17 295 1 1262 244 141 74 chr2 858726 858861 -249828993 - Charlie7 DNA MER1_type -1751 861 736 698 47 0 0 chr2 858861 858970 -249828884 - L1PA4 LINE L1 0 6155 6059 1262 244 141 74 chr2 858970 859134 -249828720 - Charlie7 DNA MER1_type -1876 736 584 5585 118 8 4 chr2 859134 860396 -249827458 - L1PA15 LINE L1 -2 6163 4868 1262 244 141 74 chr2 860396 860902 -249826952 - Charlie7 DNA MER1_type -2028 584 1 213 43 0 65 chr2 863687 863733 -249824121 + (TCCCG)n Simple_repeat Simple_repeat 2 44 0 724 264 120 15 chr2 865151 865477 -249822377 + MLT1B LTR MaLR 1 360 -30 279 262 90 25 chr2 865576 865698 -249822156 + MIR SINE MIR 14 143 -119 916 126 14 0 chr2 866385 866528 -249821326 - HSMAR2 DNA Mariner -419 883 739 2080 103 32 7 chr2 866558 866840 -249821014 - AluSg SINE Alu -4 306 18 4144 117 30 15 chr2 866849 867508 -249820346 + HSMAR2 DNA Mariner 633 1301 -1 404 235 12 29 chr2 867515 867685 -249820169 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 188 256 12 0 chr2 867770 867856 -249819998 + (CATA)n Simple_repeat Simple_repeat 2 88 0 242 191 43 17 chr2 867874 867989 -249819865 + (CATA)n Simple_repeat Simple_repeat 3 120 0 217 228 0 63 chr2 868147 868305 -249819549 + (CATA)n Simple_repeat Simple_repeat 4 151 0 215 264 13 119 chr2 871384 871543 -249816311 - MIR3 SINE MIR -55 153 12 2308 120 0 16 chr2 871885 872202 -249815652 + AluSq SINE Alu 2 313 0 13125 202 48 53 chr2 872962 874948 -249812906 + L1MA9 LINE L1 1 1996 -4380 1980 171 89 30 chr2 874948 875352 -249812502 - MSTC LTR MaLR 0 428 1 13125 202 48 53 chr2 875352 875462 -249812392 + L1MA9 LINE L1 1996 2105 -4271 892 163 106 0 chr2 875462 875622 -249812232 - AluJo/FRAM SINE Alu -3 309 133 2318 95 27 0 chr2 875625 875920 -249811934 - AluSg SINE Alu -7 303 1 13125 202 48 53 chr2 875920 877891 -249809963 + L1MA9 LINE L1 2107 3789 -2587 2390 89 0 0 chr2 877891 878183 -249809671 + AluSx SINE Alu 1 292 -20 13125 202 48 53 chr2 878183 880054 -249807800 + L1MA9 LINE L1 3789 5668 -708 21 82 0 0 chr2 880630 880679 -249807175 + AT_rich Low_complexity Low_complexity 1 49 0 1408 192 25 0 chr2 880685 880971 -249806883 + L1MA9 LINE L1 5657 5949 -427 9767 39 1 183 chr2 881001 882715 -249805139 + SVA Other Other 2 1386 0 1274 247 51 0 chr2 882716 883108 -249804746 - HAL1 LINE L1 -800 1707 1296 304 296 15 67 chr2 883460 883595 -249804259 + L1ME LINE L1 5728 5855 -266 1603 123 36 36 chr2 883599 883852 -249804002 + AluSx SINE Alu 60 312 0 252 305 24 98 chr2 883902 884066 -249803788 - MIR SINE MIR -1 261 110 193 262 164 0 chr2 884111 884172 -249803682 - MIR SINE MIR -65 197 127 219 293 7 30 chr2 885641 885929 -249801925 + C-rich Low_complexity Low_complexity 1 281 0 307 129 86 0 chr2 886015 886085 -249801769 + MER45A DNA AcHobo 81 156 -22 29 0 0 0 chr2 886305 886334 -249801520 + AT_rich Low_complexity Low_complexity 1 29 0 221 246 0 31 chr2 886363 886428 -249801426 + MIR SINE MIR 81 143 -119 326 294 39 0 chr2 886554 886656 -249801198 - MIR3 SINE MIR -7 201 96 2161 125 6 10 chr2 887609 887921 -249799933 + AluSx SINE Alu 1 311 -1 211 204 0 56 chr2 887961 888015 -249799839 + GA-rich Low_complexity Low_complexity 6 56 0 285 273 39 0 chr2 888175 888252 -249799602 - L2 LINE L2 -2 3311 3232 242 0 61 0 chr2 888277 888310 -249799544 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 543 305 121 18 chr2 888576 888973 -249798881 - L2 LINE L2 -613 2701 2264 1852 159 27 3 chr2 889638 889933 -249797921 + AluJb SINE Alu 8 309 -3 343 182 71 50 chr2 890314 890413 -249797441 - L1MC5 LINE L1 -30 7931 7831 1623 163 4 4 chr2 890694 890952 -249796902 - AluJb SINE Alu -54 258 1 2357 95 0 0 chr2 890967 891271 -249796583 - AluY SINE Alu -7 304 1 223 315 194 6 chr2 891560 891725 -249796129 + MIR SINE MIR 55 250 -12 268 319 43 49 chr2 892028 892191 -249795663 - MIR3 SINE MIR -41 167 6 268 147 0 147 chr2 892937 892989 -249794865 + MER45A DNA AcHobo 71 110 -1471 2287 113 0 0 chr2 892989 893322 -249794532 + AluSq SINE Alu 1 313 0 268 147 0 147 chr2 893322 893344 -249794510 + MER45A DNA AcHobo 110 134 -44 2125 125 7 7 chr2 894588 894892 -249792962 + AluSx SINE Alu 1 304 -8 569 165 75 75 chr2 896689 896901 -249790953 - MER69 DNA AcHobo -3 2523 2312 3778 255 30 34 chr2 896925 897860 -249789994 + L1M4 LINE L1 3371 4308 -1838 2228 128 0 0 chr2 897860 898166 -249789688 + AluSx SINE Alu 1 306 -6 3778 255 30 34 chr2 898166 898382 -249789472 + L1M4 LINE L1 4308 4519 -1627 1907 153 27 10 chr2 898382 898683 -249789171 + AluJb SINE Alu 3 308 -4 3778 255 30 34 chr2 898683 898885 -249788969 + L1M4 LINE L1 4519 4720 -1426 3897 71 4 21 chr2 898929 899489 -249788365 + SVA Other Other 2 551 -835 634 146 73 0 chr2 899939 900049 -249787805 - LTR12 LTR ERV1 -234 480 363 559 149 0 141 chr2 900049 900197 -249787657 - pTR5 LTR ERV1 -570 1528 55 266 211 0 0 chr2 900201 900253 -249787601 - LTR30 LTR ERV1 -670 52 1 2313 94 3 3 chr2 900296 900594 -249787260 - AluY SINE Alu -13 298 1 683 232 26 0 chr2 901844 901999 -249785855 - L1M4 LINE L1 -2229 3917 3759 1478 235 57 2 chr2 902019 902474 -249785380 - L1M4 LINE L1 -2545 3601 3122 426 182 65 0 chr2 902796 902873 -249784981 + THE1B LTR MaLR 1 82 -282 2078 114 9 24 chr2 902879 903211 -249784643 + THE1B LTR MaLR 38 364 0 735 259 45 53 chr2 903220 903463 -249784391 - MIR SINE MIR -17 245 5 276 335 180 0 chr2 903524 903685 -249784169 + MIR SINE MIR 58 247 -15 518 302 124 24 chr2 904345 905137 -249782717 - L2 LINE L2 0 3272 2325 195 125 0 0 chr2 905169 905209 -249782645 + (TG)n Simple_repeat Simple_repeat 1 40 0 355 324 45 73 chr2 905226 905476 -249782378 - MIR SINE MIR -17 245 4 196 268 110 39 chr2 908943 909070 -249778784 + MIR SINE MIR 51 186 -76 195 278 130 19 chr2 910128 910236 -249777618 + MIR SINE MIR 16 135 -127 1564 196 43 3 chr2 910565 911146 -249776708 - MER67B LTR ERV1 -1 660 10 814 181 0 0 chr2 911374 911507 -249776347 + FLAM_C SINE Alu 1 133 0 3109 109 17 11 chr2 911622 912090 -249775764 - LTR3b LTR ERVK -29 471 1 21 36 0 0 chr2 913627 913655 -249774199 + AT_rich Low_complexity Low_complexity 1 28 0 1670 199 28 25 chr2 914694 915051 -249772803 - MLT1A1 LTR MaLR -7 358 1 31 26 0 0 chr2 916432 916470 -249771384 + AT_rich Low_complexity Low_complexity 1 38 0 1847 55 13 0 chr2 916470 916706 -249771148 - L1PA4 LINE L1 0 6155 5917 240 175 0 0 chr2 917933 917973 -249769881 - MER67B LTR ERV1 -621 40 1 266 196 228 22 chr2 918306 918398 -249769456 - L2 LINE L2 -19 3253 3143 207 379 48 0 chr2 918826 918929 -249768925 + MIR SINE MIR 81 188 -74 31 0 0 0 chr2 919267 919298 -249768556 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr2 919748 919777 -249768077 + (A)n Simple_repeat Simple_repeat 1 29 0 4387 118 57 50 chr2 920464 921241 -249766613 + LTR1 LTR ERV1 1 782 -3 748 262 96 17 chr2 921324 921668 -249766186 - L1ME4a LINE L1 -251 5870 5500 1016 109 0 7 chr2 922672 922810 -249765044 + LTR1 LTR ERV1 648 784 -1 224 219 0 0 chr2 922893 922934 -249764920 + (CA)n Simple_repeat Simple_repeat 1 41 0 316 222 152 30 chr2 923439 923538 -249764316 - L2 LINE L2 0 3313 3203 516 294 123 11 chr2 923746 923933 -249763921 + MIR SINE MIR 55 262 0 3036 242 18 5 chr2 924231 924990 -249762864 + L1 LINE L1 2258 3026 -3120 1572 61 0 5 chr2 924991 925189 -249762665 + AluSq SINE Alu 1 197 -116 200 288 88 25 chr2 925257 925417 -249762437 - L2 LINE L2 -2007 1307 1138 213 39 0 0 chr2 926187 926213 -249761641 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1811 137 4 0 chr2 926219 926490 -249761364 - AluSq SINE Alu -41 272 1 994 158 11 16 chr2 926948 927131 -249760723 - AluJo SINE Alu -44 268 87 201 254 15 75 chr2 927805 927872 -249759982 - L2 LINE L2 -24 3289 3227 438 337 151 12 chr2 928912 929256 -249758598 - L2 LINE L2 -1 3312 2921 369 300 139 43 chr2 929317 929937 -249757917 - L2 LINE L2 -508 2806 2128 193 383 0 12 chr2 929964 930045 -249757809 + L2 LINE L2 3108 3187 -85 794 329 88 61 chr2 931541 932361 -249755493 - HAL1 LINE L1 -726 1781 940 322 327 64 0 chr2 932686 932842 -249755012 + MER5A DNA MER1_type 1 166 -23 250 303 0 11 chr2 936266 936444 -249751410 + (TG)n Simple_repeat Simple_repeat 1 176 0 309 333 20 0 chr2 936459 936558 -249751296 + (CATG)n Simple_repeat Simple_repeat 4 104 0 282 211 0 0 chr2 936561 936618 -249751236 + MER4-int LTR ERV1 1111 1167 -5431 302 264 73 0 chr2 936618 936728 -249751126 + (CATG)n Simple_repeat Simple_repeat 1 118 0 374 232 17 22 chr2 936732 936913 -249750941 + (TATG)n Simple_repeat Simple_repeat 1 180 0 308 287 0 11 chr2 936935 937116 -249750738 + (TATG)n Simple_repeat Simple_repeat 2 180 0 267 260 0 0 chr2 937205 937301 -249750553 + (TG)n Simple_repeat Simple_repeat 1 96 0 444 369 56 13 chr2 937649 937882 -249749972 + L2 LINE L2 997 1239 -2075 360 250 20 66 chr2 937882 938034 -249749820 - L1 LINE L1 -2342 3804 3660 1097 303 85 5 chr2 939393 939815 -249748039 + HsTC2 DNA Tc2 1 456 -1442 258 296 107 45 chr2 939836 940079 -249747775 - MLT1H LTR MaLR -20 529 272 246 200 100 93 chr2 940081 940221 -249747633 - MLT1H LTR MaLR -408 141 1 231 114 0 0 chr2 940230 940265 -249747589 + HsTC2 DNA Tc2 463 497 -1401 938 264 25 16 chr2 940365 940683 -249747171 + HsTC2 DNA Tc2 1573 1893 -5 4643 47 2 0 chr2 941503 942059 -249745795 + L1PA8 LINE L1 5612 6168 -4 216 97 0 0 chr2 942577 942608 -249745246 + (TG)n Simple_repeat Simple_repeat 1 31 0 2083 151 87 25 chr2 943584 943987 -249743867 - MSTA LTR MaLR 0 428 1 843 109 8 8 chr2 945770 945889 -249741965 + THE1B LTR MaLR 246 364 0 1062 201 99 48 chr2 945925 946239 -249741615 + L1MC4 LINE L1 7543 7872 -170 239 206 88 0 chr2 946248 946316 -249741538 + L1MC4 LINE L1 7835 7908 -134 185 231 0 0 chr2 946435 946474 -249741380 - L2 LINE L2 -1 3271 3233 576 240 35 85 chr2 946835 947093 -249740761 - L2 LINE L2 -5 3308 3064 393 102 0 0 chr2 947478 947537 -249740317 + (CA)n Simple_repeat Simple_repeat 1 59 0 1076 210 262 0 chr2 948061 948389 -249739465 + MER47B DNA MER2_type 1 414 -4 1979 146 0 0 chr2 949774 950076 -249737778 - AluSx SINE Alu -10 302 1 384 311 43 25 chr2 950850 951011 -249736843 + L2 LINE L2 3103 3266 -6 230 250 48 39 chr2 952664 952768 -249735086 - MER103 DNA DNA -39 127 23 29 60 0 0 chr2 954491 954541 -249733313 + AT_rich Low_complexity Low_complexity 1 50 0 180 196 98 20 chr2 954707 954758 -249733096 + L3 LINE CR1 1355 1409 -168 407 314 65 40 chr2 955474 955722 -249732132 - MLT1L LTR MaLR 0 615 362 2036 120 10 3 chr2 955966 956267 -249731587 - AluSq SINE Alu -10 303 1 333 281 105 91 chr2 956317 957230 -249730624 - L1M2 LINE L1 -5584 1265 340 552 334 116 59 chr2 957271 958730 -249729124 + L2 LINE L2 1472 3272 0 336 299 133 33 chr2 959080 959291 -249728563 + MLT1I LTR MaLR 37 268 -141 218 337 174 0 chr2 962615 962701 -249725153 + L2 LINE L2 3158 3258 -14 1475 185 16 33 chr2 962825 963128 -249724726 + AluJo SINE Alu 4 301 -11 502 290 36 36 chr2 963202 963395 -249724459 - L1MB3 LINE L1 -9 6174 5982 2252 87 0 3 chr2 963723 964023 -249723831 - AluY SINE Alu -12 299 1 192 135 0 0 chr2 964460 964497 -249723357 + (GGGAGA)n Simple_repeat Simple_repeat 4 40 0 230 256 24 32 chr2 965234 965359 -249722495 + L1MC4a LINE L1 5305 5428 -2380 22 80 0 0 chr2 965653 965703 -249722151 + AT_rich Low_complexity Low_complexity 1 50 0 201 121 0 0 chr2 965713 965746 -249722108 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 29 47 0 0 chr2 965801 965844 -249722010 + AT_rich Low_complexity Low_complexity 1 43 0 424 265 34 34 chr2 965853 966057 -249721797 + L1MC4a LINE L1 5729 5932 -1876 228 313 0 0 chr2 967323 967387 -249720467 + MIR SINE MIR 42 105 -103 304 244 105 27 chr2 967853 968007 -249719847 + MIR SINE MIR 88 262 0 405 155 10 19 chr2 969344 969447 -249718407 + CT-rich Low_complexity Low_complexity 3 104 0 1318 133 133 48 chr2 969447 969717 -249718137 - AluSx SINE Alu -19 293 1 2392 68 3 7 chr2 971392 971688 -249716166 + AluY SINE Alu 1 295 -16 22 35 0 0 chr2 973082 973111 -249714743 + AT_rich Low_complexity Low_complexity 1 29 0 2218 152 44 29 chr2 974459 974913 -249712941 - Charlie1a DNA MER1_type -356 1099 639 43795 35 21 1 chr2 974930 980960 -249706894 - L1PA3 LINE L1 0 6155 1 2203 244 41 14 chr2 980963 981550 -249706304 - Charlie1a DNA MER1_type -804 651 49 353 282 29 0 chr2 981550 981653 -249706201 - Charlie1a DNA MER1_type -1343 112 7 1114 219 11 6 chr2 983034 983332 -249704522 - MLT1A2 LTR MaLR -16 358 16 185 303 32 58 chr2 984623 984778 -249703076 + L2 LINE L2 3161 3311 -2 1145 165 176 24 chr2 986444 986699 -249701155 - AluJo SINE Alu -8 294 1 2195 110 0 20 chr2 987109 987410 -249700444 - AluSg SINE Alu -15 295 1 3070 236 91 30 chr2 988129 988961 -249698893 - L1ME1 LINE L1 0 6961 6182 1940 113 0 0 chr2 988961 989217 -249698637 - AluSc SINE Alu -17 292 37 3070 236 91 30 chr2 989217 990182 -249697672 - L1ME1 LINE L1 -779 6182 5050 21670 112 12 8 chr2 990189 993603 -249694251 - L1PA8A LINE L1 -12 6770 3371 261 0 0 0 chr2 993603 993632 -249694222 + (TA)n Simple_repeat Simple_repeat 1 29 0 2103 121 13 3 chr2 993632 993930 -249693924 - AluSg SINE Alu -9 301 1 21670 112 12 8 chr2 993930 994651 -249693203 - L1PA8A LINE L1 -3410 3372 2627 2100 172 31 21 chr2 994648 995208 -249692646 - L1PA8A LINE L1 -4559 2228 1668 * 5973 98 28 18 chr2 995201 996057 -249691797 - L1PA8A LINE L1 -5008 1203 339 1988 96 55 9 chr2 996112 996495 -249691359 - LTR7 LTR ERV1 0 450 1 3623 113 20 16 chr2 996495 997050 -249690804 - HERVH LTR ERV1 0 7713 7157 1659 122 16 0 chr2 997042 997296 -249690558 - HERVH LTR ERV1 -1696 6017 5760 * 5033 121 2 2 chr2 997292 998021 -249689833 - HERVH LTR ERV1 -3001 4712 3995 18715 143 9 27 chr2 998034 1001513 -249686341 - HERVH LTR ERV1 -3979 3734 1 2074 105 31 8 chr2 1001513 1001904 -249685950 - LTR7 LTR ERV1 0 450 1 1296 227 84 27 chr2 1001904 1002310 -249685544 - L1ME1 LINE L1 -1928 5013 4585 431 119 15 0 chr2 1002309 1002376 -249685478 - L1MD3 LINE L1 -1188 6807 6740 * 1751 192 48 0 chr2 1002404 1002758 -249685096 - L1MB7 LINE L1 -26 6158 5788 * 3321 229 54 25 chr2 1002755 1003336 -249684518 - L1ME1 LINE L1 -2569 4372 3809 2246 122 48 14 chr2 1003336 1003688 -249684166 + THE1B LTR MaLR 1 364 0 3321 229 54 25 chr2 1003688 1004211 -249683643 - L1ME1 LINE L1 -3132 3809 3236 322 234 35 21 chr2 1004196 1004341 -249683513 - L1ME1 LINE L1 -4617 2324 2178 * 445 282 20 63 chr2 1004363 1004436 -249683418 - L1ME1 LINE L1 -4888 1535 1460 854 256 42 0 chr2 1004436 1004651 -249683203 - MER58A DNA MER1_type 0 224 1 445 282 20 63 chr2 1004651 1004829 -249683025 - L1ME1 LINE L1 -4963 1460 1295 870 245 50 0 chr2 1004829 1005029 -249682825 - MER58A DNA MER1_type 0 224 15 1383 218 116 9 chr2 1005029 1005460 -249682394 - L1ME1 LINE L1 -5140 1283 807 855 307 115 23 chr2 1005497 1006054 -249681800 - L1ME1 LINE L1 -5755 668 61 257 167 17 50 chr2 1007082 1007142 -249680712 - MIR SINE MIR -121 141 84 514 111 0 20 chr2 1007441 1007540 -249680314 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 1707 218 9 14 chr2 1011814 1012162 -249675692 - MER7A DNA MER2_type 0 346 3 215 360 9 9 chr2 1012288 1012399 -249675455 + MIR SINE MIR 34 144 -64 295 286 181 29 chr2 1013157 1013328 -249674526 - L3 LINE CR1 -319 1258 1062 2073 200 30 30 chr2 1013423 1013923 -249673931 - MLT1D LTR MaLR -2 503 4 2146 162 21 72 chr2 1014564 1015034 -249672820 - L1MC1 LINE L1 0 6333 5888 282 298 96 40 chr2 1015425 1015623 -249672231 - MIR SINE MIR -23 239 31 21 0 0 0 chr2 1016277 1016298 -249671556 + AT_rich Low_complexity Low_complexity 1 21 0 1913 167 0 0 chr2 1016314 1016607 -249671247 - AluJo SINE Alu -19 293 1 2288 190 36 73 chr2 1016647 1017144 -249670710 + L1MD3 LINE L1 7419 7892 -103 2490 57 0 0 chr2 1017144 1017440 -249670414 + AluY SINE Alu 1 296 -15 2288 190 36 73 chr2 1017440 1017531 -249670323 + L1MD3 LINE L1 7892 7985 -10 489 309 68 4 chr2 1017825 1018077 -249669777 - L2 LINE L2 -1332 1982 1715 337 154 0 0 chr2 1018254 1018306 -249669548 - MER20 DNA MER1_type 0 219 168 862 271 298 16 chr2 1018313 1019015 -249668839 - L2 LINE L2 -1696 1618 1115 279 0 0 0 chr2 1019015 1019046 -249668808 + (GA)n Simple_repeat Simple_repeat 2 32 0 862 271 298 16 chr2 1019046 1019319 -249668535 - L2 LINE L2 -2199 1115 368 313 261 11 23 chr2 1019330 1019418 -249668436 + L1ME LINE L1 5582 5668 -453 29 28 0 0 chr2 1019557 1019593 -249668261 + AT_rich Low_complexity Low_complexity 1 36 0 456 287 223 16 chr2 1021490 1021737 -249666117 + Tigger8 DNA MER2_type 29 326 -340 190 106 43 0 chr2 1021939 1021986 -249665868 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 429 263 227 10 chr2 1022116 1022314 -249665540 - L2 LINE L2 0 3272 3032 181 252 133 22 chr2 1022498 1022633 -249665221 - MIR SINE MIR -52 210 61 441 249 64 77 chr2 1023168 1023503 -249664351 - MLT1J2 LTR MaLR -3 416 89 240 223 277 0 chr2 1025715 1025827 -249662027 + MIR SINE MIR 112 254 -8 327 388 25 0 chr2 1026366 1026487 -249661367 + MIR SINE MIR 22 145 -63 346 286 54 65 chr2 1026495 1026680 -249661174 - MIR3 SINE MIR -6 202 20 445 220 17 12 chr2 1026680 1026853 -249661001 + CT-rich Low_complexity Low_complexity 3 176 0 917 154 149 0 chr2 1026855 1027030 -249660824 - AluJo SINE Alu -25 287 87 21 0 0 0 chr2 1027171 1027192 -249660662 + AT_rich Low_complexity Low_complexity 1 21 0 2502 101 121 16 chr2 1028232 1028619 -249659235 + MSTA LTR MaLR 1 428 0 384 22 0 0 chr2 1028699 1028744 -249659110 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 80 0 0 chr2 1030440 1030490 -249657364 + AT_rich Low_complexity Low_complexity 1 50 0 195 343 0 30 chr2 1030739 1030806 -249657048 - L2 LINE L2 -71 3201 3137 577 253 90 50 chr2 1030938 1031436 -249656418 + L1MEc LINE L1 784 1301 -5095 299 304 164 29 chr2 1031592 1031872 -249655982 - L2 LINE L2 -1682 1632 1315 4226 95 20 4 chr2 1031943 1032488 -249655366 - MER41A LTR ERV1 0 554 1 657 196 40 20 chr2 1033761 1033909 -249653945 - L1M4c LINE L1 -4860 1786 1636 * 3779 226 15 33 chr2 1033897 1034779 -249653075 - L1M4c LINE L1 -5662 880 15 322 236 0 14 chr2 1035092 1035164 -249652690 + MER94 DNA DNA 1 71 -63 227 265 0 0 chr2 1035179 1035228 -249652626 + GA-rich Low_complexity Low_complexity 2 50 0 2078 127 7 0 chr2 1035296 1035596 -249652258 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 1035804 1035825 -249652029 + AT_rich Low_complexity Low_complexity 1 21 0 1883 223 79 28 chr2 1035874 1036483 -249651371 + MER114 LTR ERV 1 640 -8 649 264 137 42 chr2 1037483 1037986 -249649868 - L1MEc LINE L1 -5812 584 34 4797 88 45 37 chr2 1039461 1040142 -249647712 - LTR12 LTR ERV1 -1 687 1 2857 80 14 8 chr2 1040369 1040731 -249647123 - THE1B LTR MaLR 0 364 1 527 297 36 10 chr2 1041220 1041412 -249646442 + MER63A DNA MER1_type 14 210 0 189 195 0 0 chr2 1042226 1042267 -249645587 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 338 253 11 22 chr2 1042268 1042339 -249645515 + L1MC4 LINE L1 6613 6684 -1358 243 0 0 0 chr2 1042339 1042366 -249645488 + (TC)n Simple_repeat Simple_repeat 2 28 0 338 253 11 22 chr2 1042366 1042385 -249645469 + L1MC4 LINE L1 6684 6702 -1340 356 215 9 0 chr2 1042485 1042592 -249645262 + (TA)n Simple_repeat Simple_repeat 2 109 0 243 0 0 0 chr2 1042597 1042624 -249645230 + (TC)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 1042623 1042643 -249645211 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 225 0 0 0 chr2 1042642 1042667 -249645187 + (CA)n Simple_repeat Simple_repeat 2 26 0 320 229 9 0 chr2 1042749 1042858 -249644996 + (TA)n Simple_repeat Simple_repeat 2 111 0 252 170 0 0 chr2 1042928 1042981 -249644873 + (TA)n Simple_repeat Simple_repeat 2 54 0 2492 166 29 45 chr2 1042983 1043451 -249644403 - MLT2B3 LTR ERVL -35 510 58 1762 166 11 65 chr2 1043453 1043809 -249644045 + MER1B DNA MER1_type 1 337 -2 542 31 0 0 chr2 1043810 1043874 -249643980 - MLT2B3 LTR ERVL -490 64 1 498 276 56 23 chr2 1044479 1044693 -249643161 - Zaphod DNA AcHobo 0 4031 3811 1919 175 55 134 chr2 1044696 1045514 -249642340 - Zaphod DNA AcHobo -2756 1275 523 234 268 71 0 chr2 1045617 1045729 -249642125 - Zaphod DNA AcHobo -3719 312 193 320 276 126 0 chr2 1047015 1047142 -249640712 + MIR3 SINE MIR 4 146 -62 2679 191 85 77 chr2 1047236 1047955 -249639899 + LTR8A LTR ERV1 1 725 -2 1799 266 19 8 chr2 1048089 1048571 -249639283 - MER41E LTR ERV1 -5 507 21 1916 171 24 0 chr2 1048966 1049306 -249638548 - MER57A LTR ERV1 -48 355 8 2024 108 4 14 chr2 1050033 1050310 -249637544 + AluSp SINE Alu 1 274 -39 3788 183 57 1 chr2 1051190 1051895 -249635959 + Tigger2 DNA MER2_type 1 744 -1974 1616 127 20 0 chr2 1051962 1052214 -249635640 + Tigger2 DNA MER2_type 2462 2718 0 3495 118 19 6 chr2 1052273 1052789 -249635065 - MER1A DNA MER1_type -6 523 1 245 285 244 16 chr2 1052817 1053010 -249634844 + MIR SINE MIR 21 257 -5 626 202 0 9 chr2 1053163 1053277 -249634577 + L2 LINE L2 3197 3309 -4 25 51 0 0 chr2 1055631 1055670 -249632184 + AT_rich Low_complexity Low_complexity 1 39 0 497 234 109 85 chr2 1055987 1056254 -249631600 - L1ME1 LINE L1 -18 6148 5875 1340 250 76 7 chr2 1056377 1056813 -249631041 - MLT1C LTR MaLR -1 466 1 192 211 0 0 chr2 1057248 1057286 -249630568 + L3 LINE CR1 1514 1551 -26 270 300 118 18 chr2 1058071 1058181 -249629673 - L2 LINE L2 0 3313 3193 1437 37 0 0 chr2 1058191 1058352 -249629502 - L1PA3 LINE L1 -3 6152 5992 825 41 0 0 chr2 1058352 1058450 -249629404 + L1PA3 LINE L1 5899 5996 -159 1904 155 0 19 chr2 1058599 1058908 -249628946 - AluJo SINE Alu -9 303 1 383 178 82 0 chr2 1059194 1059267 -249628587 + MER3 DNA MER1_type 115 193 -16 212 193 36 133 chr2 1059444 1059527 -249628327 + L2 LINE L2 3117 3191 -81 247 326 74 0 chr2 1059588 1059683 -249628171 - L2 LINE L2 -22 3250 3149 620 318 108 43 chr2 1059807 1060464 -249627390 - L2 LINE L2 -338 2976 2277 259 182 0 18 chr2 1060500 1060555 -249627299 + Ricksha DNA DNA 815 868 -1178 2207 163 52 12 chr2 1060558 1060795 -249627059 - MLT1C LTR MaLR -27 440 179 2412 94 0 0 chr2 1060795 1061104 -249626750 - AluSg SINE Alu -1 309 1 2207 163 52 12 chr2 1061104 1061271 -249626583 - MLT1C LTR MaLR -288 179 20 694 234 119 22 chr2 1061288 1061514 -249626340 + MLT1A1 LTR MaLR 11 258 -107 865 173 12 19 chr2 1061525 1061687 -249626167 + MLT1A1 LTR MaLR 205 365 0 268 276 120 26 chr2 1061707 1061899 -249625955 - L2 LINE L2 -1087 2227 2018 1699 215 27 87 chr2 1063078 1063190 -249624664 - MLT2B3 LTR ERVL -2 552 435 3568 81 25 2 chr2 1063190 1063633 -249624221 + MLT2A2 LTR ERVL 1 453 0 1699 215 27 87 chr2 1063633 1064106 -249623748 - MLT2B3 LTR ERVL -119 435 2 1266 152 156 56 chr2 1064433 1064607 -249623247 + AluJo SINE Alu 1 213 -99 2212 152 48 28 chr2 1064607 1064962 -249622892 - THE1B LTR MaLR 0 364 3 1266 152 156 56 chr2 1064962 1065057 -249622797 + AluJo SINE Alu 213 297 -15 241 143 36 18 chr2 1065834 1065890 -249621964 - L1MC4 LINE L1 -1343 6699 6643 268 329 48 14 chr2 1066656 1066802 -249621052 + L2 LINE L2 2885 3035 -237 21 0 0 0 chr2 1066909 1066930 -249620924 + AT_rich Low_complexity Low_complexity 1 21 0 9607 116 17 6 chr2 1067866 1070245 -249617609 - L1PA11 LINE L1 -2 6172 3780 2384 106 0 73 chr2 1070245 1070643 -249617211 - L1PB1 LINE L1 0 6151 5783 7040 123 13 3 chr2 1070643 1071920 -249615934 - L1MA2 LINE L1 -26 6278 4992 6549 126 2 25 chr2 1071918 1073325 -249614529 - L1PB1 LINE L1 -3 7586 6212 * 1503 249 37 0 chr2 1073321 1073758 -249614096 - L1 LINE L1 -2794 4790 4338 * 10232 125 54 9 chr2 1073892 1076190 -249611664 - L1PBa LINE L1 -3714 3148 599 1309 131 10 0 chr2 1076164 1076362 -249611492 - L1PBa LINE L1 -6663 200 1 * 14662 205 23 28 chr2 1076373 1080531 -249607323 - L1PB1 LINE L1 -2361 5223 2 514 258 50 33 chr2 1081922 1082104 -249605750 - L1MC4 LINE L1 -1373 6669 6485 275 70 0 0 chr2 1083465 1083508 -249604346 + Alu SINE Alu 260 302 0 254 69 52 69 chr2 1083641 1083699 -249604155 + MLT1B LTR MaLR 1 57 -333 186 304 120 0 chr2 1084131 1084223 -249603631 - MIR SINE MIR -71 191 89 228 292 0 0 chr2 1085841 1085906 -249601948 + (CAATT)n Simple_repeat Simple_repeat 3 67 0 185 250 0 18 chr2 1087136 1087192 -249600662 + L2 LINE L2 3194 3248 -24 283 175 18 0 chr2 1087192 1087249 -249600605 - MLT1I LTR MaLR 0 409 352 769 276 44 4 chr2 1087296 1087521 -249600333 - MLT1I LTR MaLR -175 234 1 2086 74 0 0 chr2 1087894 1088164 -249599690 + AluY SINE Alu 39 308 -3 463 279 109 80 chr2 1089357 1089724 -249598130 + MLT1H1 LTR MaLR 100 484 -71 2181 108 0 7 chr2 1089724 1090030 -249597824 + AluSx SINE Alu 1 304 -8 463 279 109 80 chr2 1090030 1090102 -249597752 + MLT1H1 LTR MaLR 484 552 -3 867 87 17 29 chr2 1090873 1091046 -249596808 + (TTCCC)n Simple_repeat Simple_repeat 3 173 0 484 328 22 11 chr2 1091884 1092067 -249595787 - MIR SINE MIR -8 254 70 2489 110 17 80 chr2 1092095 1092212 -249595642 - L1MA4A LINE L1 -11 6292 6169 2380 64 0 10 chr2 1092212 1092525 -249595329 - AluY SINE Alu -1 310 1 2489 110 17 80 chr2 1092525 1092872 -249594982 - L1MA4A LINE L1 -134 6169 5857 608 162 0 51 chr2 1093079 1093122 -249594732 + L1MA3 LINE L1 6195 6239 -66 2439 120 28 11 chr2 1093122 1093480 -249594374 + THE1B LTR MaLR 1 364 0 608 162 0 51 chr2 1093480 1093553 -249594301 + L1MA3 LINE L1 6239 6305 0 265 320 22 10 chr2 1094666 1094800 -249593054 + MIR SINE MIR 85 218 -44 241 232 85 73 chr2 1094903 1094985 -249592869 + MIR SINE MIR 87 169 -93 1841 108 7 32 chr2 1095506 1095784 -249592070 + AluSx SINE Alu 3 273 -39 2319 81 0 0 chr2 1097202 1097511 -249590343 + AluY SINE Alu 1 309 -2 2054 100 19 19 chr2 1097800 1098111 -249589743 + AluSq SINE Alu 3 313 0 803 185 43 19 chr2 1098913 1099124 -249588730 + Charlie5 DNA MER1_type 2366 2581 -31 335 279 14 0 chr2 1099192 1099339 -249588515 + CT-rich Low_complexity Low_complexity 4 152 0 2725 83 11 0 chr2 1099578 1099929 -249587925 - THE1A LTR MaLR 0 355 1 12102 93 2 1 chr2 1099929 1101506 -249586348 - THE1A-int LTR MaLR 0 1580 1 2486 104 17 20 chr2 1101506 1101862 -249585992 - THE1A LTR MaLR 0 355 1 346 307 122 55 chr2 1101930 1102168 -249585686 - L2 LINE L2 0 3272 3019 249 327 36 27 chr2 1103207 1103317 -249584537 + L2 LINE L2 3157 3267 -5 2327 103 0 0 chr2 1103382 1103694 -249584160 - AluSx SINE Alu 0 312 1 204 276 105 0 chr2 1107041 1107117 -249580737 + MIR SINE MIR 138 221 -41 248 292 123 39 chr2 1107571 1107701 -249580153 + MIR3 SINE MIR 34 174 -34 227 261 203 0 chr2 1108355 1108424 -249579430 - MIR SINE MIR -63 145 63 197 304 36 0 chr2 1108917 1108973 -249578881 + L2 LINE L2 3248 3305 -8 372 311 0 19 chr2 1108973 1109079 -249578775 + MIR SINE MIR 42 145 -63 25 51 0 0 chr2 1109170 1109209 -249578645 + AT_rich Low_complexity Low_complexity 1 39 0 432 214 119 8 chr2 1109731 1109857 -249577997 + MIR SINE MIR 113 252 -10 220 273 15 15 chr2 1110005 1110071 -249577783 + L2 LINE L2 3202 3267 -5 2202 98 0 0 chr2 1110216 1110522 -249577332 - AluSc SINE Alu -3 306 1 381 258 25 58 chr2 1110551 1110671 -249577183 + L2 LINE L2 3134 3249 -23 329 207 224 35 chr2 1110913 1111029 -249576825 - L2 LINE L2 -15 3298 3161 395 288 85 30 chr2 1112287 1112523 -249575331 + HERV16 LTR ERVL 1241 1489 -3507 379 230 11 0 chr2 1112969 1113056 -249574798 - MER53 DNA DNA -2 187 100 269 146 104 0 chr2 1114388 1114436 -249573418 + Charlie3 DNA MER1_type 2645 2697 -13 295 178 14 14 chr2 1114490 1114563 -249573291 + GA-rich Low_complexity Low_complexity 4 76 0 982 264 162 57 chr2 1114777 1115033 -249572821 - HAL1 LINE L1 -1352 1155 927 1915 141 7 0 chr2 1115033 1115332 -249572522 - AluSx SINE Alu -11 301 1 982 264 162 57 chr2 1115332 1115743 -249572111 - HAL1 LINE L1 -1580 927 418 285 232 0 0 chr2 1115806 1115875 -249571979 + CT-rich Low_complexity Low_complexity 5 73 0 3629 121 19 4 chr2 1115926 1116440 -249571414 - MER1A DNA MER1_type -5 524 3 277 303 37 28 chr2 1116684 1116793 -249571061 - L1MC4 LINE L1 -140 7902 7793 1513 203 128 30 chr2 1116808 1117246 -249570608 - MLT1D LTR MaLR -4 501 21 1782 152 18 0 chr2 1117384 1117661 -249570193 + AluJb SINE Alu 13 294 -18 412 214 128 0 chr2 1117671 1117788 -249570066 - L1MC4 LINE L1 -386 7656 7525 1954 135 44 0 chr2 1118298 1118595 -249569259 - AluSx SINE Alu -2 310 1 245 240 13 13 chr2 1118669 1118744 -249569110 + (TA)n Simple_repeat Simple_repeat 2 76 0 1913 144 0 21 chr2 1119370 1119661 -249568193 - AluJo SINE Alu -10 302 18 282 116 0 0 chr2 1119883 1119926 -249567928 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2140 98 55 33 chr2 1119976 1120343 -249567511 + THE1C LTR MaLR 1 375 0 208 328 25 34 chr2 1121011 1121130 -249566724 - MIR SINE MIR -121 141 24 244 325 51 8 chr2 1121672 1121789 -249566065 - MIR SINE MIR -90 172 51 591 134 47 20 chr2 1122894 1123246 -249564608 + (TG)n Simple_repeat Simple_repeat 1 361 0 499 180 28 17 chr2 1123261 1123439 -249564415 + (TG)n Simple_repeat Simple_repeat 1 180 0 666 124 47 9 chr2 1123472 1123811 -249564043 + (TG)n Simple_repeat Simple_repeat 1 352 0 410 117 32 11 chr2 1124086 1124180 -249563674 + (TG)n Simple_repeat Simple_repeat 1 96 0 872 196 119 35 chr2 1124189 1124507 -249563347 + MSTC LTR MaLR 42 421 -7 1102 240 50 89 chr2 1124714 1125273 -249562581 - MER89 LTR ERV1 -22 537 1 180 0 0 0 chr2 1125889 1125909 -249561945 + (TC)n Simple_repeat Simple_repeat 2 21 0 3774 157 21 97 chr2 1126845 1127056 -249560798 - MER54B LTR ERVL 0 793 568 1625 184 0 27 chr2 1127056 1127350 -249560504 - AluJb SINE Alu -26 286 1 3774 157 21 97 chr2 1127350 1127996 -249559858 - MER54B LTR ERVL -225 568 1 304 346 59 0 chr2 1130645 1130781 -249557073 - MIR SINE MIR -18 244 101 1775 194 22 27 chr2 1130853 1131220 -249556634 + MLT1A1 LTR MaLR 1 365 0 204 125 0 0 chr2 1131439 1131471 -249556383 + (CTG)n Simple_repeat Simple_repeat 2 33 0 243 216 39 0 chr2 1131586 1131637 -249556217 + CT-rich Low_complexity Low_complexity 3 55 0 257 287 151 6 chr2 1132448 1132571 -249555283 - MIR SINE MIR -61 147 30 259 279 67 39 chr2 1132650 1132754 -249555100 + MIR SINE MIR 48 154 -108 227 266 16 0 chr2 1134270 1134334 -249553520 - L2 LINE L2 -5 3267 3203 306 281 58 8 chr2 1134373 1134494 -249553360 + L1MEd LINE L1 54 180 -5939 552 231 140 52 chr2 1134814 1135122 -249552732 + L1MC4 LINE L1 7708 8042 0 655 331 84 22 chr2 1135125 1135493 -249552361 + L1MEd LINE L1 404 794 -5325 303 305 121 11 chr2 1136237 1136509 -249551345 + L1M4 LINE L1 3626 3927 -2219 531 269 87 107 chr2 1136657 1137264 -249550590 - MLT1G1 LTR MaLR 0 595 1 185 333 0 15 chr2 1137663 1137729 -249550125 - MIR SINE MIR -150 112 48 738 462 14 41 chr2 1138619 1138693 -249549161 + MER44D DNA MER2_type 1 76 -2415 180 0 0 0 chr2 1138693 1138713 -249549141 + (GA)n Simple_repeat Simple_repeat 1 20 0 738 462 14 41 chr2 1138713 1138928 -249548926 + MER44D DNA MER2_type 76 552 -57 241 248 173 51 chr2 1139014 1139228 -249548626 - L1MEc LINE L1 -1163 5052 4813 617 297 110 64 chr2 1139553 1140904 -249546950 - L1MEc LINE L1 -1672 4543 3255 2504 98 0 35 chr2 1140904 1140944 -249546910 - THE1B LTR MaLR 0 364 324 2252 95 6 38 chr2 1140944 1141260 -249546594 + AluY SINE Alu 1 306 -5 2504 98 0 35 chr2 1141260 1141596 -249546258 - THE1B LTR MaLR -40 324 1 10460 108 33 34 chr2 1141596 1143178 -249544676 - THE1B-int LTR MaLR 0 1580 1 2611 123 0 3 chr2 1143178 1143543 -249544311 - THE1B LTR MaLR 0 364 1 617 297 110 64 chr2 1143543 1143978 -249543876 - L1MEc LINE L1 -2959 3256 2673 4084 237 79 18 chr2 1144108 1145521 -249542333 - L1MC/D LINE L1 -743 5821 4424 592 183 46 8 chr2 1145565 1145696 -249542158 - L1 LINE L1 -1862 4284 4149 * 5910 126 28 22 chr2 1145694 1146921 -249540933 - L1P4 LINE L1 -587 5581 4364 3534 274 24 24 chr2 1146943 1148106 -249539748 - L1MC/D LINE L1 -4878 1167 5 965 222 4 12 chr2 1148120 1148372 -249539482 - L1MEc LINE L1 -3951 2445 2196 1559 93 0 0 chr2 1148407 1148600 -249539254 + AluSg1 SINE Alu 9 201 -108 227 148 37 0 chr2 1148700 1148754 -249539100 + C-rich Low_complexity Low_complexity 2 57 0 228 111 0 0 chr2 1149144 1149180 -249538674 + (T)n Simple_repeat Simple_repeat 1 36 0 22298 154 25 41 chr2 1150212 1151137 -249536717 - L1PB1 LINE L1 -1 6465 5527 2872 93 0 3 chr2 1151137 1151513 -249536341 - THE1C LTR MaLR 0 375 1 22298 154 25 41 chr2 1151513 1152306 -249535548 - L1PB1 LINE L1 -939 5527 4723 1841 126 18 22 chr2 1152306 1152584 -249535270 - AluSx SINE Alu 0 312 36 22298 154 25 41 chr2 1152584 1152646 -249535208 - L1PB1 LINE L1 -1743 4723 4662 6544 71 0 2 chr2 1152646 1154310 -249533544 - L1PA8A LINE L1 -3 6128 4477 5737 38 0 18 chr2 1154315 1155020 -249532834 - L1PA4 LINE L1 0 6155 5464 22298 154 25 41 chr2 1155020 1156212 -249531642 - L1PB1 LINE L1 -1808 4658 3448 234 0 0 0 chr2 1156212 1156238 -249531616 + (TA)n Simple_repeat Simple_repeat 2 27 0 22298 154 25 41 chr2 1156238 1159755 -249528099 - L1PB1 LINE L1 -3018 3448 1 4541 206 16 2 chr2 1159765 1160699 -249527155 - L1 LINE L1 -1773 4373 3427 336 270 138 7 chr2 1161958 1162110 -249525744 - MIR SINE MIR -79 183 12 215 342 63 54 chr2 1164525 1164747 -249523107 - L2 LINE L2 -125 3147 2924 3580 75 25 2 chr2 1166027 1166507 -249521347 + L1PA8 LINE L1 5682 6172 0 483 247 121 6 chr2 1167177 1167359 -249520495 + MIR SINE MIR 59 261 -1 281 250 218 16 chr2 1168141 1168393 -249519461 - L1ME4a LINE L1 -4 6117 5815 23 0 0 0 chr2 1168424 1168447 -249519407 + AT_rich Low_complexity Low_complexity 1 23 0 409 269 154 29 chr2 1168703 1168878 -249518976 - Charlie8 DNA MER1_type -2195 222 26 237 363 50 16 chr2 1169286 1169468 -249518386 - MIR SINE MIR -73 189 2 316 275 128 0 chr2 1170597 1170706 -249517148 - L2 LINE L2 -3 3310 3188 2367 92 7 3 chr2 1171045 1171348 -249516506 - AluSx SINE Alu -8 304 1 230 206 118 0 chr2 1173125 1173193 -249514661 - MIR3 SINE MIR -21 187 112 21 36 0 0 chr2 1173731 1173759 -249514095 + AT_rich Low_complexity Low_complexity 1 28 0 195 136 0 58 chr2 1173969 1174072 -249513782 + (TA)n Simple_repeat Simple_repeat 1 97 0 186 133 0 0 chr2 1174724 1174754 -249513100 + (T)n Simple_repeat Simple_repeat 1 30 0 187 221 0 88 chr2 1175902 1175970 -249511884 + MIR SINE MIR 109 170 -92 315 62 0 42 chr2 1177132 1177180 -249510674 + Alu SINE Alu 250 295 -6 1349 280 48 26 chr2 1177180 1177862 -249509992 - L1MEc LINE L1 -4222 2174 1478 1913 142 79 17 chr2 1178883 1179236 -249508618 + THE1C LTR MaLR 1 375 0 386 267 62 67 chr2 1180137 1180347 -249507507 - MLT1K LTR MaLR 0 588 380 256 250 0 112 chr2 1180373 1180489 -249507365 - L2 LINE L2 -18 3295 3193 1782 196 88 60 chr2 1180875 1181374 -249506480 - MLT2B1 LTR ERVL -3 517 5 330 317 81 16 chr2 1181375 1181561 -249506293 - MIR SINE MIR -25 237 40 201 250 26 13 chr2 1182822 1182898 -249504956 + CT-rich Low_complexity Low_complexity 3 79 0 215 237 278 18 chr2 1184013 1184182 -249503672 - MIR SINE MIR -20 242 30 299 310 8 0 chr2 1184825 1184954 -249502900 + (TG)n Simple_repeat Simple_repeat 2 131 0 423 322 0 0 chr2 1184973 1185153 -249502701 + (TG)n Simple_repeat Simple_repeat 1 180 0 2282 266 70 14 chr2 1185734 1186685 -249501169 - Charlie2 DNA MER1_type 0 2862 1858 464 284 64 36 chr2 1186705 1186955 -249500899 - Charlie2 DNA MER1_type -2560 302 46 497 287 18 24 chr2 1186962 1187129 -249500725 - MER5B DNA MER1_type -12 166 1 204 276 83 70 chr2 1188000 1188156 -249499698 + L2 LINE L2 3155 3312 -1 3064 196 16 13 chr2 1188574 1189208 -249498646 - L1MA4 LINE L1 -6 6294 5659 2019 144 42 31 chr2 1190334 1190694 -249497160 + THE1B LTR MaLR 1 364 0 392 215 0 0 chr2 1190867 1190960 -249496894 - L1MB8 LINE L1 -2 6176 6084 2130 222 45 8 chr2 1190972 1191463 -249496391 - L1MB4 LINE L1 -13 6167 5659 248 222 34 26 chr2 1191997 1192114 -249495740 + (TA)n Simple_repeat Simple_repeat 2 119 0 243 175 48 16 chr2 1192830 1192893 -249494961 + MIR SINE MIR 104 168 -94 306 290 128 39 chr2 1193634 1193975 -249493879 - L2 LINE L2 -183 3130 2705 183 311 123 0 chr2 1194004 1194110 -249493744 - L2 LINE L2 -703 2611 2493 809 263 10 0 chr2 1194160 1194354 -249493500 - MLT1A1 LTR MaLR 0 365 170 788 167 29 64 chr2 1194458 1194662 -249493192 - MLT1A1 LTR MaLR -176 198 2 1617 199 178 20 chr2 1196011 1196056 -249491798 - MLT2B2 LTR ERVL 0 515 478 240 35 0 0 chr2 1196056 1196085 -249491769 + (CA)n Simple_repeat Simple_repeat 2 30 0 1617 199 178 20 chr2 1196085 1196482 -249491372 - MLT2B2 LTR ERVL -37 478 3 2365 127 25 0 chr2 1196627 1196982 -249490872 - THE1B LTR MaLR 0 364 1 3893 75 26 0 chr2 1196982 1197478 -249490376 - THE1B-int LTR MaLR 0 1580 1072 4401 164 33 33 chr2 1197479 1198466 -249489388 - MER11C LTR ERVK 0 1071 1 6923 116 19 40 chr2 1198466 1199550 -249488304 - THE1B-int LTR MaLR -519 1061 1 2319 130 28 3 chr2 1199550 1199904 -249487950 - THE1B LTR MaLR 0 364 2 275 317 49 21 chr2 1199946 1200088 -249487766 - MIR3 SINE MIR -60 148 3 2095 118 180 114 chr2 1200382 1200950 -249486904 + LTR18B LTR ERVL 1 605 -9 267 317 50 17 chr2 1201039 1201159 -249486695 + MIR SINE MIR 22 145 -117 1642 183 49 24 chr2 1201616 1201944 -249485910 - MLT1A1 LTR MaLR -4 361 26 216 0 0 0 chr2 1203270 1203294 -249484560 + (T)n Simple_repeat Simple_repeat 1 24 0 219 336 37 15 chr2 1204052 1204186 -249483668 + MIR SINE MIR 16 152 -56 2529 116 3 0 chr2 1205592 1205946 -249481908 + THE1A LTR MaLR 1 355 0 1358 147 0 9 chr2 1207253 1207464 -249480390 - AluJb SINE Alu -20 292 84 326 253 110 24 chr2 1207662 1207806 -249480048 - MER5B DNA MER1_type -24 165 2 200 339 77 15 chr2 1208336 1208466 -249479388 - MIR3 SINE MIR -6 202 65 2228 148 36 17 chr2 1208620 1208977 -249478877 + THE1B LTR MaLR 1 364 0 182 193 35 70 chr2 1209451 1209508 -249478346 - MIR3 SINE MIR -54 154 100 1111 124 34 51 chr2 1209606 1209785 -249478069 - L1MA8 LINE L1 -10 6281 6104 2188 113 3 0 chr2 1209785 1210088 -249477766 + AluSx SINE Alu 1 304 0 1111 124 34 51 chr2 1210088 1210141 -249477713 - L1MA8 LINE L1 -187 6104 6052 307 286 0 0 chr2 1210183 1210260 -249477594 + MIR SINE MIR 173 249 -13 472 306 40 5 chr2 1210349 1210548 -249477306 - MIR SINE MIR -7 255 50 237 204 0 0 chr2 1211191 1211240 -249476614 - L3 LINE CR1 -180 1397 1349 21 0 0 0 chr2 1211582 1211603 -249476251 + AT_rich Low_complexity Low_complexity 1 21 0 255 232 29 14 chr2 1211703 1211772 -249476082 - MLT1I LTR MaLR -30 379 310 264 356 29 19 chr2 1211990 1212198 -249475656 - L1M4 LINE L1 -1333 4813 4604 4637 205 19 12 chr2 1212234 1213432 -249474422 - L1PA16 LINE L1 -722 5444 4232 4068 137 63 1 chr2 1213432 1214097 -249473757 + L1PA16 LINE L1 5452 6157 -9 39 0 0 0 chr2 1214507 1214546 -249473308 + AT_rich Low_complexity Low_complexity 1 39 0 273 183 0 0 chr2 1214802 1214862 -249472992 + (TA)n Simple_repeat Simple_repeat 2 61 0 467 322 91 10 chr2 1215093 1215487 -249472367 - HAL1 LINE L1 -855 1652 1227 468 286 36 96 chr2 1215509 1215925 -249471929 - L1MEd LINE L1 -5034 1085 695 217 358 37 19 chr2 1216629 1216791 -249471063 - L3 LINE CR1 -606 971 807 3598 137 18 0 chr2 1216957 1217469 -249470385 + MER1A DNA MER1_type 1 521 -8 276 331 108 7 chr2 1217623 1217771 -249470083 + MIR SINE MIR 49 211 -51 744 212 38 11 chr2 1218410 1218594 -249469260 + MER5A DNA MER1_type 1 189 0 215 205 0 0 chr2 1219412 1219451 -249468403 + GA-rich Low_complexity Low_complexity 1 39 0 211 317 98 55 chr2 1220879 1221043 -249466811 - MIR3 SINE MIR -32 176 6 242 222 14 28 chr2 1221741 1221813 -249466041 + CT-rich Low_complexity Low_complexity 2 72 0 203 200 0 40 chr2 1222432 1222482 -249465372 + C-rich Low_complexity Low_complexity 5 52 0 1123 293 43 5 chr2 1223044 1223484 -249464370 + MLT1C LTR MaLR 1 457 -10 2848 85 0 0 chr2 1223645 1224009 -249463845 + THE1B LTR MaLR 1 364 0 192 302 128 20 chr2 1224645 1224794 -249463060 + MIR3 SINE MIR 33 197 -11 236 221 143 0 chr2 1225262 1225339 -249462515 - MER5A DNA MER1_type -80 109 22 219 233 0 0 chr2 1227062 1227105 -249460749 + (CAT)n Simple_repeat Simple_repeat 3 45 0 227 255 0 0 chr2 1229314 1229365 -249458489 + PABL_B LTR ERV1 1 51 -616 272 336 96 64 chr2 1229403 1229715 -249458139 + PABL_A LTR ERV1 25 346 -314 820 229 36 32 chr2 1229886 1230139 -249457715 + PABL_B LTR ERV1 414 667 0 230 254 17 0 chr2 1230836 1230895 -249456959 + L3 LINE CR1 1515 1574 -3 771 170 7 22 chr2 1231612 1231747 -249456107 + FLAM_C SINE Alu 1 133 0 377 306 23 12 chr2 1231827 1232000 -249455854 - HAL1 LINE L1 -89 2418 2244 811 287 120 40 chr2 1232237 1233043 -249454811 - HAL1 LINE L1 -604 1903 1033 1319 119 39 153 chr2 1233047 1233407 -249454447 - L1MA4A LINE L1 0 6303 5985 900 216 42 0 chr2 1233670 1233860 -249453994 - MER58A DNA MER1_type -3 221 24 241 305 51 0 chr2 1233980 1234098 -249453756 - HAL1 LINE L1 -1777 730 607 277 344 2 11 chr2 1234207 1234318 -249453536 + MER5A DNA MER1_type 67 172 -6 226 277 161 15 chr2 1234879 1235016 -249452838 + MER110 LTR ERV1 307 463 -28 240 200 0 0 chr2 1236568 1236618 -249451236 + (TG)n Simple_repeat Simple_repeat 1 50 0 3268 84 34 2 chr2 1236876 1237314 -249450540 + MLT2A2 LTR ERVL 2 453 0 43778 78 13 4 chr2 1237314 1242918 -249444936 + HERVL-A2 LTR ERVL 1 5654 0 3094 97 26 29 chr2 1242918 1243329 -249444525 + MLT2A2 LTR ERVL 1 411 -42 198 0 0 0 chr2 1243329 1243351 -249444503 + (TA)n Simple_repeat Simple_repeat 2 23 0 375 23 0 0 chr2 1243357 1243401 -249444453 + (TC)n Simple_repeat Simple_repeat 1 44 0 3094 97 26 29 chr2 1243401 1243436 -249444418 + MLT2A2 LTR ERVL 416 453 0 1271 160 106 57 chr2 1243834 1244116 -249443738 - AluJo SINE Alu -16 296 1 489 279 132 11 chr2 1244623 1244813 -249443041 + MIR SINE MIR 50 262 0 1500 204 56 66 chr2 1245604 1245997 -249441857 + MLT1B LTR MaLR 1 389 -1 328 248 95 19 chr2 1246019 1246124 -249441730 - L1ME3A LINE L1 -223 5947 5835 1578 90 0 0 chr2 1248027 1248238 -249439616 - L1PA8 LINE L1 0 6172 5962 1841 122 38 94 chr2 1248972 1249027 -249438827 + THE1C LTR MaLR 1 58 -317 2373 94 7 0 chr2 1249027 1249335 -249438519 + AluSx SINE Alu 1 310 -2 1841 122 38 94 chr2 1249335 1249674 -249438180 + THE1C LTR MaLR 58 373 -2 299 132 0 19 chr2 1250195 1250248 -249437606 + THE1C LTR MaLR 124 175 -200 202 178 56 33 chr2 1250984 1251074 -249436780 + (TA)n Simple_repeat Simple_repeat 1 92 0 26 30 0 0 chr2 1251158 1251191 -249436663 + AT_rich Low_complexity Low_complexity 1 33 0 1124 110 12 18 chr2 1252198 1252361 -249435493 - AluJ SINE Alu -11 301 140 333 132 19 0 chr2 1252645 1252698 -249435156 + MSTA LTR MaLR 1 54 -374 239 185 0 37 chr2 1252714 1252768 -249435086 - AluJ SINE Alu -169 133 82 298 270 13 19 chr2 1252966 1253125 -249434729 + (TA)n Simple_repeat Simple_repeat 2 159 0 189 74 0 0 chr2 1253125 1253152 -249434702 + (GA)n Simple_repeat Simple_repeat 2 28 0 1771 126 0 39 chr2 1254122 1254332 -249433522 + Charlie3 DNA MER1_type 1 218 -2494 2735 93 11 13 chr2 1254332 1254708 -249433146 - THE1C LTR MaLR 0 375 1 1771 126 0 39 chr2 1254708 1254892 -249432962 + Charlie3 DNA MER1_type 218 2712 0 1399 204 37 74 chr2 1255309 1255712 -249432142 - MLT1B LTR MaLR -2 388 1 439 248 7 7 chr2 1255859 1256008 -249431846 + CT-rich Low_complexity Low_complexity 4 152 0 309 294 164 36 chr2 1256221 1256659 -249431195 + L1ME4a LINE L1 5448 5941 -180 200 83 0 28 chr2 1259047 1259083 -249428771 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 19646 55 1 1 chr2 1259083 1262289 -249425565 - L1PA5 LINE L1 -24 6130 2926 207 236 83 14 chr2 1263764 1263836 -249424018 + MIR SINE MIR 48 124 -138 288 250 14 19 chr2 1263844 1263998 -249423856 - MLT1J1 LTR MaLR -11 500 237 354 321 37 21 chr2 1264154 1264341 -249423513 - MLT1J2 LTR MaLR -254 196 7 208 356 22 0 chr2 1264350 1264440 -249423414 + MIR SINE MIR 166 257 -5 21 0 0 0 chr2 1264663 1264684 -249423170 + AT_rich Low_complexity Low_complexity 1 21 0 185 238 0 0 chr2 1264839 1264881 -249422973 + MIR SINE MIR 203 244 -18 1564 229 31 3 chr2 1266159 1266512 -249421342 - MLT1A1 LTR MaLR 0 365 3 2278 70 47 3 chr2 1266665 1266963 -249420891 + AluSq SINE Alu 1 311 -2 192 40 0 0 chr2 1267215 1267240 -249420614 + (CA)n Simple_repeat Simple_repeat 1 25 0 521 266 49 21 chr2 1267289 1267432 -249420422 - MIR SINE MIR -112 150 4 280 312 14 7 chr2 1267810 1267951 -249419903 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 258 273 65 79 chr2 1269768 1269907 -249417947 + MIR SINE MIR 8 144 -118 5809 143 5 4 chr2 1271475 1272395 -249415459 - L1MA5 LINE L1 0 6300 5380 339 65 0 0 chr2 1273001 1273047 -249414807 + (TG)n Simple_repeat Simple_repeat 2 47 0 269 362 7 33 chr2 1274949 1275101 -249412753 - MIR SINE MIR -113 149 2 292 335 58 29 chr2 1275197 1275370 -249412484 + MIR SINE MIR 4 181 -81 809 119 0 84 chr2 1278026 1278169 -249409685 - L1PB4 LINE L1 -1 6155 6025 1295 193 89 50 chr2 1279067 1279404 -249408450 + MLT1B LTR MaLR 4 353 -37 374 271 25 8 chr2 1279681 1279799 -249408055 - L1ME3 LINE L1 -135 6027 5908 1925 251 75 56 chr2 1279805 1279993 -249407861 - L1MEc LINE L1 -3609 2606 2423 2205 114 7 0 chr2 1279993 1280291 -249407563 - AluSx SINE Alu -12 300 1 1925 251 75 56 chr2 1280291 1281459 -249406395 - L1MEc LINE L1 -3792 2423 1265 31 0 0 0 chr2 1282652 1282683 -249405171 + AT_rich Low_complexity Low_complexity 1 31 0 603 196 227 54 chr2 1284138 1284501 -249403353 - MLT1C LTR MaLR 0 390 1 289 310 90 19 chr2 1286441 1286709 -249401145 - LTR16C LTR ERVL -18 473 187 246 128 0 0 chr2 1286997 1287036 -249400818 + (TG)n Simple_repeat Simple_repeat 2 40 0 384 305 148 24 chr2 1287106 1287316 -249400538 - MIR SINE MIR -7 255 20 230 288 0 15 chr2 1287956 1288022 -249399832 - MIR SINE MIR -176 86 22 333 235 6 41 chr2 1288365 1288535 -249399319 + GA-rich Low_complexity Low_complexity 4 167 0 505 303 109 45 chr2 1288539 1289007 -249398847 - L2 LINE L2 -1686 1628 1131 208 326 57 7 chr2 1289028 1289169 -249398685 - L2 LINE L2 -2879 435 288 243 114 0 89 chr2 1289215 1289294 -249398560 + (TAATG)n Simple_repeat Simple_repeat 4 75 0 1352 271 130 23 chr2 1289337 1289989 -249397865 - L2 LINE L2 -2381 933 212 437 194 121 40 chr2 1289997 1290121 -249397733 - MER45A DNA AcHobo -35 143 10 199 268 177 30 chr2 1290150 1290314 -249397540 - L2 LINE L2 -3091 223 36 536 144 25 8 chr2 1291237 1291355 -249396499 + CT-rich Low_complexity Low_complexity 3 122 0 225 284 211 16 chr2 1291359 1291553 -249396301 + L2 LINE L2 1607 1838 -1476 1399 262 203 41 chr2 1291653 1292203 -249395651 + L2 LINE L2 2054 2513 -800 1707 166 3 18 chr2 1292203 1292518 -249395336 - AluSx SINE Alu 0 313 3 1399 262 203 41 chr2 1292518 1292999 -249394855 + L2 LINE L2 2513 3287 -26 1992 72 103 0 chr2 1295089 1295382 -249392472 + AluSp SINE Alu 1 320 0 15668 113 82 4 chr2 1295488 1295500 -249392354 - L1P LINE L1 -2149 3997 3987 9439 93 9 2 chr2 1295500 1297542 -249390312 - L1PA7 LINE L1 -3 6466 4427 15668 113 82 4 chr2 1297542 1298885 -249388969 - L1P LINE L1 -2159 3987 2751 396 0 0 0 chr2 1298885 1298929 -249388925 + (TA)n Simple_repeat Simple_repeat 2 45 0 15668 113 82 4 chr2 1298929 1300082 -249387772 - L1P LINE L1 -3395 2751 1291 414 103 0 0 chr2 1300079 1300137 -249387717 - L1PA7 LINE L1 -6393 68 11 * 3516 197 22 3 chr2 1300127 1300838 -249387016 - L1MB1 LINE L1 -190 5978 5254 1208 214 23 7 chr2 1300843 1301142 -249386712 - L1MB1 LINE L1 -3045 3101 2798 1157 264 32 19 chr2 1301142 1301456 -249386398 + MLT1E LTR MaLR 276 593 0 239 265 15 15 chr2 1302501 1302569 -249385285 + MIR SINE MIR 82 149 -113 192 158 0 0 chr2 1303792 1303830 -249384024 + CT-rich Low_complexity Low_complexity 2 39 0 860 275 36 20 chr2 1303890 1304141 -249383713 + MIR SINE MIR 5 259 -3 348 24 0 0 chr2 1304844 1304885 -249382969 + (TG)n Simple_repeat Simple_repeat 2 42 0 1440 282 123 17 chr2 1305593 1306128 -249381726 - MLT1E LTR MaLR 0 593 2 234 241 41 123 chr2 1306391 1306561 -249381293 + L2 LINE L2 2926 3081 -191 359 247 0 7 chr2 1306606 1306760 -249381094 + (CTA)n Simple_repeat Simple_repeat 1 153 0 288 289 117 0 chr2 1306841 1306969 -249380885 - MIR SINE MIR -8 254 112 2054 118 52 17 chr2 1307053 1307400 -249380454 + L1MA5A LINE L1 5936 6294 -3 234 244 219 24 chr2 1307611 1307734 -249380120 + MIR SINE MIR 115 261 -1 256 263 98 44 chr2 1309486 1309802 -249378052 - L1ME LINE L1 -4085 2176 1844 281 183 92 0 chr2 1309808 1309928 -249377926 - L1M4 LINE L1 -1712 4434 4304 342 250 100 17 chr2 1310727 1310847 -249377007 - L1M4 LINE L1 -1898 4248 4119 * 1440 254 94 58 chr2 1310845 1312269 -249375585 - L1ME LINE L1 -4448 1813 323 2247 222 14 30 chr2 1312694 1313203 -249374651 + MLT1D LTR MaLR 5 505 0 24 0 0 0 chr2 1313657 1313681 -249374173 + AT_rich Low_complexity Low_complexity 1 24 0 241 257 175 33 chr2 1313827 1314010 -249373844 + MLT1J2 LTR MaLR 228 436 -10 752 197 48 69 chr2 1314424 1314612 -249373242 + MER20 DNA MER1_type 36 219 0 187 286 208 31 chr2 1318159 1318351 -249369503 + L2 LINE L2 3086 3311 -2 * 211 277 0 0 chr2 1318349 1318396 -249369458 - L2 LINE L2 -26 3246 3200 191 143 20 51 chr2 1318463 1318561 -249369293 + (TA)n Simple_repeat Simple_repeat 1 95 0 286 292 20 119 chr2 1318601 1318803 -249369051 + MIR SINE MIR 2 183 -79 1444 216 58 50 chr2 1319074 1319436 -249368418 + MLT1A1 LTR MaLR 1 365 0 2022 146 0 0 chr2 1319493 1319780 -249368074 + AluSx SINE Alu 1 287 -25 643 241 65 12 chr2 1319795 1319965 -249367889 + MER5A DNA MER1_type 11 189 0 391 287 130 28 chr2 1321559 1321775 -249366079 + MIR SINE MIR 20 257 -5 304 327 0 19 chr2 1321797 1321901 -249365953 + MIR SINE MIR 117 218 -44 391 191 154 29 chr2 1322151 1322287 -249365567 + L1ME4a LINE L1 5961 6113 -8 270 151 57 0 chr2 1322536 1322589 -249365265 + L2 LINE L2 3217 3272 0 305 276 48 129 chr2 1322959 1323463 -249364391 + L2 LINE L2 2810 3272 0 199 242 0 121 chr2 1323572 1323663 -249364191 - MIR SINE MIR -95 167 88 197 339 0 0 chr2 1324475 1324531 -249363323 - MIR SINE MIR -68 140 85 3202 31 3 5 chr2 1324644 1325034 -249362820 - L1PA4 LINE L1 -1 6154 5766 359 150 25 12 chr2 1325035 1325115 -249362739 - L1MB8 LINE L1 -1 6177 6097 4455 250 105 52 chr2 1325118 1326975 -249360879 - L1ME1 LINE L1 -150 6827 5071 309 64 21 0 chr2 1326975 1327022 -249360832 - MADE1 DNA Mariner -2 78 31 4455 250 105 52 chr2 1327022 1327053 -249360801 - L1ME1 LINE L1 -1906 5071 5043 304 18 196 0 chr2 1327053 1327109 -249360745 - MADE1 DNA Mariner -13 67 1 4455 250 105 52 chr2 1327109 1327940 -249359914 - L1ME1 LINE L1 -1934 5043 4258 2836 13 0 0 chr2 1327940 1328251 -249359603 - AluYa5 SINE Alu 0 311 1 4455 250 105 52 chr2 1328251 1328352 -249359502 - L1ME1 LINE L1 -2719 4258 4164 2784 19 0 0 chr2 1328352 1328664 -249359190 - AluYb8 SINE Alu -6 312 1 4455 250 105 52 chr2 1328664 1330101 -249357753 - L1ME1 LINE L1 -2813 4164 2069 944 252 53 55 chr2 1330115 1330871 -249356983 - L1ME1 LINE L1 -4900 1955 1215 274 316 128 15 chr2 1331118 1331314 -249356540 - L1ME1 LINE L1 -6613 246 29 681 13 0 0 chr2 1332458 1332536 -249355318 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 358 266 32 96 chr2 1333239 1333427 -249354427 - MIR SINE MIR -52 210 35 276 379 73 10 chr2 1333933 1334139 -249353715 + L2 LINE L2 2375 2593 -721 41 21 0 0 chr2 1334418 1334466 -249353388 + AT_rich Low_complexity Low_complexity 1 48 0 192 259 107 71 chr2 1334842 1334954 -249352900 - L3 LINE CR1 -1117 460 345 297 284 39 39 chr2 1335183 1335338 -249352516 - LTR33 LTR ERVL -22 499 345 583 300 82 8 chr2 1335338 1335581 -249352273 + L2 LINE L2 224 484 -2830 673 298 108 20 chr2 1335659 1336059 -249351795 + L3 LINE CR1 1111 1545 -32 340 191 24 0 chr2 1336158 1336242 -249351612 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 716 321 111 14 chr2 1336618 1336976 -249350878 + L2 LINE L2 2606 2995 -318 198 243 229 0 chr2 1337842 1337912 -249349942 + MIR SINE MIR 171 256 -6 41026 34 21 2 chr2 1338226 1344277 -249343577 + L1PA3 LINE L1 1 6171 0 215 244 0 0 chr2 1344874 1344915 -249342939 + MER5B DNA MER1_type 6 46 -132 219 125 0 0 chr2 1345119 1345159 -249342695 + (TG)n Simple_repeat Simple_repeat 2 41 0 215 198 129 52 chr2 1345290 1345356 -249342498 + MIR SINE MIR 121 180 -82 1713 178 22 73 chr2 1345356 1345767 -249342087 + MLT1B LTR MaLR 1 390 0 215 198 129 52 chr2 1345767 1345816 -249342038 + MIR SINE MIR 180 245 -17 34 72 0 0 chr2 1345869 1345938 -249341916 + AT_rich Low_complexity Low_complexity 1 69 0 4372 171 47 39 chr2 1346054 1347230 -249340624 - L1MC1 LINE L1 -23 6310 5125 262 270 20 30 chr2 1347254 1347354 -249340500 - MIR SINE MIR -25 237 139 3981 236 28 21 chr2 1347372 1348656 -249339198 - L1MC1 LINE L1 -1058 5088 3796 1828 162 41 22 chr2 1348661 1349128 -249338726 + MLT2A2 LTR ERVL 1 370 -83 894 111 62 0 chr2 1349128 1349272 -249338582 - LTR9-int LTR ERV1 -47 8872 8720 540 194 8 15 chr2 1349426 1349560 -249338294 - LTR9-int LTR ERV1 -2450 2565 2433 * 800 160 11 11 chr2 1349551 1349726 -249338128 - LTR9-int LTR ERV1 -3693 4123 3949 26621 171 41 46 chr2 1349730 1356691 -249331163 - LTR9-int LTR ERV1 -471 6947 22 3428 133 68 22 chr2 1356712 1357297 -249330557 - LTR9 LTR ERV1 0 612 1 1594 94 0 31 chr2 1357297 1357551 -249330303 + HERVL-A2 LTR ERVL 5409 5654 0 1954 170 56 33 chr2 1357551 1358078 -249329776 + MLT2A2 LTR ERVL 1 554 0 1103 279 42 5 chr2 1358078 1358505 -249329349 - L1MC1 LINE L1 -2351 3795 3353 23 33 0 0 chr2 1358839 1358869 -249328985 + AT_rich Low_complexity Low_complexity 1 30 0 185 116 0 47 chr2 1359083 1359126 -249328728 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 842 141 88 0 chr2 1359335 1359505 -249328349 + L1MB3 LINE L1 5998 6182 -1 2118 137 45 31 chr2 1359525 1359703 -249328151 + THE1B LTR MaLR 1 175 -189 2252 78 41 0 chr2 1359703 1359998 -249327856 + AluY SINE Alu 1 307 -4 2118 137 45 31 chr2 1359998 1360178 -249327676 + THE1B LTR MaLR 175 364 0 2302 99 0 40 chr2 1362543 1362866 -249324988 + AluSq SINE Alu 1 310 -3 555 262 47 58 chr2 1364917 1365089 -249322765 + MIR SINE MIR 27 196 -66 349 203 80 129 chr2 1365092 1365255 -249322599 - L2 LINE L2 0 3313 3159 321 109 0 0 chr2 1365259 1365314 -249322540 + (T)n Simple_repeat Simple_repeat 1 55 0 2240 78 0 0 chr2 1366092 1366421 -249321433 - AluY SINE Alu 0 329 1 277 136 30 76 chr2 1367206 1367272 -249320582 - HERV17 LTR ERV1 -6241 2385 2323 839 209 32 13 chr2 1369276 1369555 -249318299 + MLT1B LTR MaLR 5 360 -30 2091 154 36 39 chr2 1369564 1369927 -249317927 - THE1B LTR MaLR -2 362 1 280 249 90 57 chr2 1370814 1370991 -249316863 - L1ME3A LINE L1 -202 5968 5786 25 75 0 0 chr2 1371467 1371520 -249316334 + AT_rich Low_complexity Low_complexity 1 53 0 430 180 50 0 chr2 1372193 1372342 -249315512 + L1PBa LINE L1 1093 1394 -5469 * 4250 204 70 7 chr2 1372338 1373315 -249314539 - L1PBa LINE L1 -5820 1043 6 411 212 186 17 chr2 1374401 1374519 -249313335 + LTR40a LTR ERVL 1 138 -381 387 252 62 12 chr2 1374698 1374813 -249313041 + LTR40a LTR ERVL 251 414 -93 1886 157 165 11 chr2 1377875 1378245 -249309609 + MSTA LTR MaLR 1 427 -1 231 287 37 9 chr2 1378384 1378492 -249309362 + LTR67 LTR ERVL 444 554 -3 197 231 0 0 chr2 1378584 1378623 -249309231 + MIR SINE MIR 117 155 -107 1261 143 63 68 chr2 1379795 1380047 -249307807 - L1MA8 LINE L1 -422 5869 5619 479 135 0 0 chr2 1380047 1380121 -249307733 + L1MA7 LINE L1 6218 6291 0 1208 69 0 0 chr2 1381564 1381708 -249306146 + AluSp/q SINE Alu 161 304 -9 412 73 0 0 chr2 1381802 1381857 -249305997 - MLT2A2 LTR ERVL 0 453 399 763 98 14 43 chr2 1381857 1382229 -249305625 + (TA)n Simple_repeat Simple_repeat 1 361 0 2477 127 62 3 chr2 1382233 1382619 -249305235 - MLT2A2 LTR ERVL -44 409 1 2068 129 3 22 chr2 1382822 1383140 -249304714 + AluSx SINE Alu 1 312 0 219 324 0 14 chr2 1383362 1383436 -249304418 + A-rich Low_complexity Low_complexity 5 77 0 27 81 0 0 chr2 1383498 1383560 -249304294 + AT_rich Low_complexity Low_complexity 1 62 0 299 260 20 103 chr2 1383835 1383981 -249303873 - L2 LINE L2 0 3313 3180 2419 88 0 0 chr2 1384094 1384399 -249303455 - AluSc SINE Alu -4 305 1 183 167 0 0 chr2 1385938 1385980 -249301874 + GA-rich Low_complexity Low_complexity 2 43 0 787 176 0 0 chr2 1386115 1386240 -249301614 + AluJb SINE Alu 172 296 -16 391 300 29 19 chr2 1386357 1386567 -249301287 - HAL1 LINE L1 -282 2225 2014 21 71 0 0 chr2 1386633 1386675 -249301179 + AT_rich Low_complexity Low_complexity 1 42 0 346 220 18 28 chr2 1386772 1386881 -249300973 - L1MA9 LINE L1 -222 6090 5983 851 223 114 136 chr2 1387717 1387922 -249299932 - Charlie2 DNA MER1_type -51 2811 2603 2283 86 0 3 chr2 1387922 1388213 -249299641 + AluSx SINE Alu 1 290 -22 851 223 114 136 chr2 1388213 1389051 -249298803 - Charlie2 DNA MER1_type -259 2603 1791 620 179 32 0 chr2 1389067 1389190 -249298664 + L1MA4 LINE L1 6172 6298 -2 218 152 53 20 chr2 1389199 1389350 -249298504 + (TATAA)n Simple_repeat Simple_repeat 4 159 0 23 33 0 0 chr2 1389362 1389392 -249298462 + AT_rich Low_complexity Low_complexity 1 30 0 246 174 33 16 chr2 1389397 1389518 -249298336 + (TA)n Simple_repeat Simple_repeat 1 123 0 22 70 0 0 chr2 1389579 1389622 -249298232 + AT_rich Low_complexity Low_complexity 1 43 0 208 167 42 24 chr2 1389624 1389792 -249298062 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 231 120 101 38 chr2 1389795 1389953 -249297901 + (TTATA)n Simple_repeat Simple_repeat 5 172 0 257 250 38 50 chr2 1390285 1390365 -249297489 + MER5A DNA MER1_type 106 184 -5 187 246 211 0 chr2 1390546 1390603 -249297251 + L2 LINE L2 3233 3301 -12 997 152 5 91 chr2 1390603 1390801 -249297053 + AluJo SINE Alu 84 264 -48 2321 70 13 20 chr2 1390868 1391170 -249296684 + AluSc SINE Alu 3 302 -7 315 0 0 0 chr2 1391736 1391771 -249296083 + (CA)n Simple_repeat Simple_repeat 2 36 0 763 216 0 8 chr2 1392481 1392615 -249295239 + FLAM_A SINE Alu 1 133 0 466 252 25 0 chr2 1392845 1392964 -249294890 - Charlie8 DNA MER1_type -2250 167 46 1809 158 127 82 chr2 1393387 1393850 -249294004 - MER74A LTR ERVL -60 498 15 23 0 0 0 chr2 1395148 1395171 -249292683 + GC_rich Low_complexity Low_complexity 1 23 0 236 53 26 0 chr2 1396173 1396211 -249291643 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1515 176 47 0 chr2 1396218 1396496 -249291358 - AluJo SINE Alu -21 291 1 304 231 15 0 chr2 1396498 1396563 -249291291 - MIR SINE MIR -106 102 37 2166 111 14 0 chr2 1397818 1398115 -249289739 + AluSx SINE Alu 1 301 -11 498 179 0 0 chr2 1398457 1398541 -249289313 + Alu SINE Alu 219 302 -9 1081 234 75 44 chr2 1398552 1398937 -249288917 + L1MC5 LINE L1 7521 7917 -44 2034 222 92 25 chr2 1398957 1399524 -249288330 + L1ME3A LINE L1 5554 6158 -12 30 0 0 0 chr2 1399524 1399554 -249288300 + AT_rich Low_complexity Low_complexity 1 30 0 1156 71 0 0 chr2 1399567 1399707 -249288147 + AluSq SINE Alu 33 172 -141 518 272 70 35 chr2 1400138 1400366 -249287488 - MIR SINE MIR -10 252 17 265 121 35 69 chr2 1401129 1401187 -249286667 - MLT1C LTR MaLR -411 56 1 966 191 0 0 chr2 1401790 1401947 -249285907 + FRAM SINE Alu 5 161 -5 1845 130 0 60 chr2 1403066 1403426 -249284428 - AluSx SINE Alu 0 342 1 2235 96 0 3 chr2 1403873 1404166 -249283688 - AluSx SINE Alu -3 309 18 2006 144 3 0 chr2 1404493 1404791 -249283063 - AluSx SINE Alu -13 299 1 297 281 111 79 chr2 1404808 1405162 -249282692 - L1MC4 LINE L1 -9 8033 7550 381 257 19 9 chr2 1405335 1405440 -249282414 - L1MC4 LINE L1 -1 8041 7936 286 250 95 27 chr2 1405445 1405593 -249282261 - L1MC4 LINE L1 -196 7846 7689 * 519 196 89 18 chr2 1405581 1405742 -249282112 - L1MC4 LINE L1 -385 7460 7254 341 252 53 73 chr2 1405747 1405824 -249282030 - L1MC4 LINE L1 -780 7262 7188 1850 166 0 13 chr2 1405824 1406126 -249281728 + AluJb SINE Alu 2 299 -13 341 252 53 73 chr2 1406126 1406199 -249281655 - L1MC4 LINE L1 -854 7188 7115 180 0 0 0 chr2 1406325 1406345 -249281509 + (A)n Simple_repeat Simple_repeat 1 20 0 1665 126 65 51 chr2 1406893 1407187 -249280667 - AluJb SINE Alu -14 298 1 239 143 102 0 chr2 1407736 1407785 -249280069 + L2 LINE L2 3248 3301 -12 2059 102 60 0 chr2 1408329 1408612 -249279242 + AluSx SINE Alu 1 300 -12 286 313 81 0 chr2 1408614 1408713 -249279141 - L2 LINE L2 -14 3299 3193 1058 184 40 0 chr2 1408951 1409179 -249278675 + L1MA4 LINE L1 6060 6296 -4 288 212 61 30 chr2 1409420 1409486 -249278368 + MIR SINE MIR 34 101 -107 284 299 118 16 chr2 1409514 1409641 -249278213 + MIR SINE MIR 93 232 -30 230 289 0 0 chr2 1410580 1410632 -249277222 + polypyrimidine Low_complexity Low_complexity 3 54 0 647 257 63 54 chr2 1410876 1411098 -249276756 + MER58A DNA MER1_type 1 224 0 351 314 102 44 chr2 1411109 1411335 -249276519 - L1MC4a LINE L1 -393 7415 7177 721 297 91 24 chr2 1411390 1411807 -249276047 - L1MC4 LINE L1 -881 7161 6717 22 0 0 0 chr2 1411966 1411988 -249275866 + AT_rich Low_complexity Low_complexity 1 22 0 391 203 183 110 chr2 1412326 1412572 -249275282 - LTR41 LTR ERVL -507 266 3 1303 274 90 37 chr2 1412576 1413312 -249274542 - L1MCc LINE L1 -4887 1536 935 1941 176 58 26 chr2 1413536 1413577 -249274277 - MLT2A2 LTR ERVL 0 554 516 450 0 0 0 chr2 1413577 1413627 -249274227 + (TA)n Simple_repeat Simple_repeat 2 51 0 1941 176 58 26 chr2 1413627 1414114 -249273740 - MLT2A2 LTR ERVL -38 516 1 1074 283 28 33 chr2 1414166 1414593 -249273261 - L1MCc LINE L1 -5985 438 14 392 386 48 21 chr2 1414595 1414932 -249272922 + L1MC/D LINE L1 5463 5808 -2000 594 278 7 0 chr2 1415207 1415351 -249272503 - MIR SINE MIR -51 211 67 183 139 0 0 chr2 1415660 1415696 -249272158 + (T)n Simple_repeat Simple_repeat 1 36 0 349 329 83 23 chr2 1415696 1415912 -249271942 - MLT1J LTR MaLR -247 264 36 2441 78 0 3 chr2 1416115 1416421 -249271433 - AluY SINE Alu -6 305 1 344 308 245 9 chr2 1416802 1417133 -249270721 - MLT1I LTR MaLR 0 409 1 30 45 0 0 chr2 1417150 1417194 -249270660 + AT_rich Low_complexity Low_complexity 1 44 0 283 313 46 28 chr2 1417984 1418201 -249269653 + LTR33 LTR ERVL 301 521 0 288 0 0 0 chr2 1418423 1418455 -249269399 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 241 238 109 30 chr2 1418693 1418794 -249269060 + LTR50 LTR ERVL 104 212 -583 635 261 188 12 chr2 1418797 1419142 -249268712 + LTR50 LTR ERVL 390 795 0 228 305 32 7 chr2 1421280 1421434 -249266420 - L1M4 LINE L1 -1456 4690 4533 1173 257 136 83 chr2 1421493 1421840 -249266014 - MLT1E3 LTR MaLR -2 622 230 1609 187 10 17 chr2 1421840 1422129 -249265725 - AluJo SINE Alu -25 287 1 1173 257 136 83 chr2 1422129 1422369 -249265485 - MLT1E3 LTR MaLR -394 230 4 2446 271 74 13 chr2 1422713 1423922 -249263932 + L1ME1 LINE L1 2583 3864 -2282 1623 228 19 71 chr2 1423931 1424449 -249263405 - MLT1D LTR MaLR -14 491 1 725 250 128 78 chr2 1424449 1424579 -249263275 + L1ME1 LINE L1 3860 3982 -2164 411 83 0 0 chr2 1424579 1424639 -249263215 + (CA)n Simple_repeat Simple_repeat 1 60 0 725 250 128 78 chr2 1424639 1425024 -249262830 + L1ME1 LINE L1 3982 4401 -1745 * 1659 256 34 34 chr2 1425022 1425902 -249261952 + L1ME1 LINE L1 4783 6103 -63 36 40 0 0 chr2 1425931 1425981 -249261873 + AT_rich Low_complexity Low_complexity 1 50 0 27 29 0 0 chr2 1426060 1426094 -249261760 + AT_rich Low_complexity Low_complexity 1 34 0 3642 221 20 7 chr2 1426248 1426960 -249260894 + MER44D DNA MER2_type 13 605 0 21 0 0 0 chr2 1426974 1426995 -249260859 + AT_rich Low_complexity Low_complexity 1 21 0 1527 116 0 22 chr2 1428268 1428492 -249259362 - AluSx SINE Alu -93 219 1 496 288 29 62 chr2 1428673 1428947 -249258907 - L2 LINE L2 -850 2464 2200 211 247 86 25 chr2 1429202 1429283 -249258571 - MIR SINE MIR -113 149 64 23 0 0 0 chr2 1429692 1429715 -249258139 + AT_rich Low_complexity Low_complexity 1 23 0 998 311 58 15 chr2 1430731 1431143 -249256711 + L2 LINE L2 2371 2800 -514 391 184 58 29 chr2 1431623 1431797 -249256057 + (TG)n Simple_repeat Simple_repeat 1 179 0 1412 123 21 16 chr2 1432056 1432299 -249255555 + L1MA6 LINE L1 6053 6296 -4 287 319 61 52 chr2 1432837 1433066 -249254788 + MLT1K LTR MaLR 340 570 -18 314 250 24 12 chr2 1434036 1434120 -249253734 - L2 LINE L2 -3 3310 3226 214 290 48 0 chr2 1434296 1434358 -249253496 + MIR SINE MIR 98 162 -100 39 0 0 0 chr2 1436189 1436228 -249251626 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 1436527 1436557 -249251297 + AT_rich Low_complexity Low_complexity 1 30 0 641 163 0 7 chr2 1437741 1437882 -249249972 + GA-rich Low_complexity Low_complexity 3 142 0 273 119 0 0 chr2 1437875 1437917 -249249937 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 * 772 151 0 27 chr2 1437952 1438137 -249249717 + GA-rich Low_complexity Low_complexity 1 180 0 821 180 16 5 chr2 1438160 1438566 -249249288 + GA-rich Low_complexity Low_complexity 1 410 0 204 194 0 0 chr2 1438579 1438615 -249249239 + GA-rich Low_complexity Low_complexity 3 38 0 476 279 86 96 chr2 1439049 1439444 -249248410 + HAL1 LINE L1 1119 1509 -998 266 197 197 70 chr2 1439504 1439599 -249248255 + MIR SINE MIR 105 225 -37 928 176 88 123 chr2 1439599 1439974 -249247880 - MLT1A1 LTR MaLR 0 365 4 266 197 197 70 chr2 1439974 1440007 -249247847 + MIR SINE MIR 225 252 -10 32 43 0 0 chr2 1440230 1440276 -249247578 + AT_rich Low_complexity Low_complexity 1 46 0 208 262 66 16 chr2 1440611 1440672 -249247182 - MIR SINE MIR -72 190 127 383 95 14 176 chr2 1440984 1441194 -249246660 + (TA)n Simple_repeat Simple_repeat 2 177 0 272 126 31 99 chr2 1441232 1441423 -249246431 + (TA)n Simple_repeat Simple_repeat 2 179 0 289 183 59 6 chr2 1441467 1441636 -249246218 + (TA)n Simple_repeat Simple_repeat 2 179 0 4134 150 37 6 chr2 1442245 1442966 -249244888 - MER49 LTR ERV1 -9 914 171 217 211 40 13 chr2 1442966 1443042 -249244812 + (TG)n Simple_repeat Simple_repeat 1 78 0 29 0 0 0 chr2 1443260 1443289 -249244565 + AT_rich Low_complexity Low_complexity 1 29 0 802 317 46 19 chr2 1444349 1444718 -249243136 - MLT1J LTR MaLR -20 491 113 2008 157 0 0 chr2 1445059 1445353 -249242501 - AluSg SINE Alu -16 294 1 2209 100 3 7 chr2 1445453 1445754 -249242100 + AluSx SINE Alu 1 300 -12 225 0 0 0 chr2 1445903 1445928 -249241926 + (A)n Simple_repeat Simple_repeat 1 25 0 2306 173 28 16 chr2 1446839 1447266 -249240588 + Tigger2a DNA MER2_type 3 434 0 715 140 0 0 chr2 1448211 1448318 -249239536 + AluSq/x SINE Alu 1 107 -205 22 0 0 0 chr2 1448357 1448379 -249239475 + AT_rich Low_complexity Low_complexity 1 22 0 1537 251 92 11 chr2 1448578 1449013 -249238841 + L1MDa LINE L1 3 472 -6068 638 191 0 20 chr2 1449090 1449237 -249238617 + L1MD1 LINE L1 6099 6242 0 363 108 0 77 chr2 1449379 1449444 -249238410 - MLT2B1 LTR ERVL -348 66 7 272 346 0 0 chr2 1450229 1450333 -249237521 + GA-rich Low_complexity Low_complexity 3 106 0 1063 267 18 7 chr2 1450931 1451204 -249236650 + L1M4c LINE L1 1 276 -6108 273 130 0 0 chr2 1451196 1451242 -249236612 + L1M4c LINE L1 1442 1487 -4897 * 27 29 0 0 chr2 1451327 1451361 -249236493 + AT_rich Low_complexity Low_complexity 1 34 0 214 191 0 0 chr2 1451485 1451527 -249236327 + A-rich Low_complexity Low_complexity 1 42 0 1057 259 73 79 chr2 1452245 1453786 -249234068 + L1MDa LINE L1 1128 2622 -3918 683 260 82 86 chr2 1453908 1453969 -249233885 + L1MDa LINE L1 2715 2775 -3765 1653 160 60 41 chr2 1453969 1454337 -249233517 + THE1C LTR MaLR 1 375 0 8592 153 18 43 chr2 1454339 1455957 -249231897 + THE1C-int LTR MaLR 3 1580 0 1490 167 53 61 chr2 1455957 1456335 -249231519 + THE1C LTR MaLR 1 375 0 683 260 82 86 chr2 1456335 1457022 -249230832 + L1MDa LINE L1 2775 3465 -3075 3607 146 30 8 chr2 1457022 1457678 -249230176 + L1MA8 LINE L1 5621 6291 0 683 260 82 86 chr2 1457678 1457909 -249229945 + L1MDa LINE L1 3465 3695 -2845 824 187 55 55 chr2 1457923 1458142 -249229712 - MER20 DNA MER1_type 0 219 1 668 311 28 21 chr2 1458242 1458367 -249229487 + L1MDa LINE L1 3820 3943 -2597 567 113 0 0 chr2 1458367 1458447 -249229407 - MADE1 DNA Mariner 0 80 1 668 311 28 21 chr2 1458447 1458710 -249229144 + L1MDa LINE L1 3943 4211 -2329 205 266 0 0 chr2 1458737 1458801 -249229053 + A-rich Low_complexity Low_complexity 1 64 0 1972 151 0 0 chr2 1458909 1459213 -249228641 + AluSx SINE Alu 6 309 -3 2222 109 3 0 chr2 1459219 1459522 -249228332 + AluSg SINE Alu 1 304 -6 27 29 0 0 chr2 1459658 1459692 -249228162 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 1459917 1459938 -249227916 + AT_rich Low_complexity Low_complexity 1 21 0 427 79 0 16 chr2 1459995 1460058 -249227796 - MADE1 DNA Mariner -18 62 1 271 258 44 38 chr2 1460074 1460233 -249227621 + L1MDa LINE L1 4894 5053 -1487 719 230 143 15 chr2 1460690 1460955 -249226899 - MER46C DNA MER2_type -39 299 1 655 182 64 51 chr2 1461146 1461356 -249226498 - MLT1B LTR MaLR 0 390 173 24 67 0 0 chr2 1461658 1461703 -249226151 + AT_rich Low_complexity Low_complexity 1 45 0 209 185 15 0 chr2 1461777 1461842 -249226012 + (TAG)n Simple_repeat Simple_repeat 3 68 0 693 288 45 0 chr2 1461844 1462042 -249225812 - MIR SINE MIR 0 262 56 234 169 0 84 chr2 1462388 1462459 -249225395 + MLT1H LTR MaLR 478 549 0 767 67 0 29 chr2 1462714 1462818 -249225036 + AluSg1 SINE Alu 1 101 -208 835 137 0 0 chr2 1463325 1463449 -249224405 + AluSg/x SINE Alu 154 277 -33 270 95 0 0 chr2 1463449 1463491 -249224363 + (CA)n Simple_repeat Simple_repeat 1 42 0 230 264 0 11 chr2 1464735 1464826 -249223028 + CT-rich Low_complexity Low_complexity 3 92 0 2175 116 0 3 chr2 1465192 1465512 -249222342 - AluSq SINE Alu 0 313 1 3136 213 50 3 chr2 1465560 1466254 -249221600 - MER44D DNA MER2_type -6 599 1 24 0 0 0 chr2 1469897 1469921 -249217933 + AT_rich Low_complexity Low_complexity 1 24 0 226 273 146 64 chr2 1471031 1471141 -249216713 - L2 LINE L2 -21 3251 3133 1853 100 93 4 chr2 1471793 1472093 -249215761 - AluSx SINE Alu 0 312 1 3289 114 16 0 chr2 1472125 1472632 -249215222 - L1PA13 LINE L1 -15 6148 5634 963 145 0 0 chr2 1472928 1473279 -249214575 + (TG)n Simple_repeat Simple_repeat 2 530 0 31 58 0 0 chr2 1473760 1473812 -249214042 + AT_rich Low_complexity Low_complexity 1 52 0 231 283 58 80 chr2 1474241 1474379 -249213475 - L2 LINE L2 -561 2753 2619 22 35 0 0 chr2 1475013 1475042 -249212812 + AT_rich Low_complexity Low_complexity 1 29 0 241 329 0 12 chr2 1476223 1476308 -249211546 + L2 LINE L2 3186 3269 -3 267 316 101 29 chr2 1476526 1476665 -249211189 - L2 LINE L2 0 3313 3165 351 180 0 0 chr2 1476703 1476764 -249211090 - Tigger5 DNA MER2_type 0 2323 2263 878 138 0 63 chr2 1476764 1476938 -249210916 + Tigger1 DNA MER2_type 1 163 -2255 * 1039 151 47 24 chr2 1476919 1477131 -249210723 + Tigger1 DNA MER2_type 2202 2418 0 1001 164 0 0 chr2 1477131 1477308 -249210546 - Tigger5 DNA MER2_type -59 2264 2088 328 180 16 0 chr2 1477332 1477393 -249210461 - Tigger5 DNA MER2_type -2261 62 1 364 317 145 6 chr2 1477594 1477938 -249209916 - L2 LINE L2 -376 2938 2547 192 358 15 60 chr2 1478318 1478452 -249209402 - L2 LINE L2 -265 3007 2880 224 122 24 0 chr2 1478592 1478633 -249209221 + (CA)n Simple_repeat Simple_repeat 1 42 0 391 282 79 54 chr2 1478634 1479044 -249208810 - MLT1L LTR MaLR -40 533 151 940 232 84 58 chr2 1479154 1479282 -249208572 + MLT1A2 LTR MaLR 6 129 -245 2444 61 0 3 chr2 1479282 1479575 -249208279 - AluY SINE Alu -19 292 1 940 232 84 58 chr2 1479575 1479791 -249208063 + MLT1A2 LTR MaLR 129 359 -15 336 266 148 0 chr2 1479930 1480058 -249207796 - MIR SINE MIR -12 250 104 1391 128 30 8 chr2 1480501 1480735 -249207119 + MSTB1 LTR MaLR 193 431 -1 185 393 28 9 chr2 1481579 1481686 -249206168 - MER5A DNA MER1_type -79 110 2 3437 57 40 2 chr2 1482606 1483060 -249204794 + L1PA8 LINE L1 5694 6164 -8 243 263 0 84 chr2 1483685 1483780 -249204074 + MER5A DNA MER1_type 55 141 -48 1935 301 133 50 chr2 1485998 1487407 -249200447 - L2 LINE L2 -545 2769 1244 1983 228 12 12 chr2 1487408 1487926 -249199928 - L1 LINE L1 -2302 3844 3327 409 109 0 0 chr2 1487926 1487990 -249199864 - L1 LINE L1 -3126 3020 2957 2138 128 26 64 chr2 1488004 1488504 -249199350 + L1PB4 LINE L1 5254 5734 -422 588 179 0 0 chr2 1488506 1488612 -249199242 + L1PB4 LINE L1 5835 5940 -216 845 168 0 0 chr2 1488629 1488748 -249199106 + FLAM_C SINE Alu 6 124 -19 839 234 0 10 chr2 1488764 1488956 -249198898 + L1PB4 LINE L1 5964 6153 -3 2113 127 0 3 chr2 1488966 1489266 -249198588 + AluSg SINE Alu 1 299 -11 323 221 15 0 chr2 1489266 1489334 -249198520 - L2 LINE L2 -2068 1246 1178 366 232 111 0 chr2 1489995 1490094 -249197760 + MIR SINE MIR 153 262 0 2185 96 6 13 chr2 1490342 1490655 -249197199 + AluY SINE Alu 1 311 0 10994 166 25 40 chr2 1492053 1495030 -249192824 + L1M1 LINE L1 22 3627 -3938 21791 130 14 77 chr2 1495039 1495439 -249192415 + L1P LINE L1 1 424 -5722 204 67 0 0 chr2 1495439 1495469 -249192385 + (TTG)n Simple_repeat Simple_repeat 2 31 0 21791 130 14 77 chr2 1495469 1499605 -249188249 + L1P LINE L1 424 4254 -1892 5867 66 19 0 chr2 1499605 1500370 -249187484 + L1PA7 LINE L1 5369 6153 -1 9409 205 12 4 chr2 1500370 1502502 -249185352 + L1M1 LINE L1 3641 5788 -1777 46 19 0 0 chr2 1502514 1502567 -249185287 + AT_rich Low_complexity Low_complexity 1 53 0 2681 71 14 6 chr2 1502725 1503090 -249184764 - L1PB1 LINE L1 -7 6144 5777 725 225 31 0 chr2 1503713 1503873 -249183981 - MER45A DNA AcHobo -10 168 4 341 340 95 16 chr2 1503874 1504247 -249183607 + ERVL LTR ERVL 4674 5114 -528 432 299 121 17 chr2 1504596 1504894 -249182960 + LTR16A LTR ERVL 16 344 -106 899 317 37 24 chr2 1505282 1506218 -249181636 - HERV16 LTR ERVL -2347 2649 1674 413 383 44 0 chr2 1506249 1506500 -249181354 - HERV16 LTR ERVL -3418 1578 1317 1653 163 73 12 chr2 1507259 1507602 -249180252 - MLT1A1 LTR MaLR 0 365 2 27 0 0 0 chr2 1509974 1510001 -249177853 + AT_rich Low_complexity Low_complexity 1 27 0 1061 268 34 54 chr2 1510022 1510556 -249177298 + MER119 DNA MER1_type 51 573 -10 1238 145 108 0 chr2 1511380 1511621 -249176233 + L1MC1 LINE L1 6065 6331 -2 187 250 0 0 chr2 1512591 1512631 -249175223 - MER5A DNA MER1_type -22 167 128 364 118 61 19 chr2 1512879 1513099 -249174755 + (TAGA)n Simple_repeat Simple_repeat 1 229 0 346 287 42 75 chr2 1513310 1513575 -249174279 + L1M4 LINE L1 3545 3800 -2346 1902 158 6 16 chr2 1513997 1514308 -249173546 - AluJb SINE Alu -3 309 2 302 289 29 0 chr2 1514313 1514417 -249173437 + HAL1b LINE L1 1241 1347 -1 452 315 164 6 chr2 1514446 1514770 -249173084 - L1ME4a LINE L1 -7 6114 5740 304 256 0 26 chr2 1515149 1515227 -249172627 + MIR SINE MIR 68 143 -119 2255 112 0 0 chr2 1516677 1516971 -249170883 + AluSg1 SINE Alu 1 294 -15 2433 102 120 5 chr2 1517063 1517446 -249170408 - MSTA LTR MaLR -1 427 1 218 357 48 0 chr2 1518210 1518294 -249169560 - L2 LINE L2 -94 3178 3091 5180 50 8 2 chr2 1518416 1518428 -249169426 - L1PA8 LINE L1 -5 6167 6157 279 0 0 0 chr2 1518428 1518459 -249169395 + (TA)n Simple_repeat Simple_repeat 1 31 0 5180 50 8 2 chr2 1518459 1519090 -249168764 - L1PA8 LINE L1 -15 6157 5520 245 202 44 79 chr2 1519112 1519226 -249168628 - L1ME4a LINE L1 -462 5659 5550 230 276 201 22 chr2 1519682 1519816 -249168038 + MIR SINE MIR 71 228 -34 669 136 149 19 chr2 1519876 1520030 -249167824 + MSTA LTR MaLR 224 397 -31 1928 152 10 3 chr2 1520083 1520379 -249167475 - AluSx SINE Alu -14 298 1 939 276 121 27 chr2 1520620 1521099 -249166755 - L1ME1 LINE L1 -50 6116 5593 737 247 13 31 chr2 1521097 1521324 -249166530 + L1MEc LINE L1 45 267 -6129 * 709 273 41 9 chr2 1521317 1521658 -249166196 + L1MEc LINE L1 2306 2657 -3558 * 296 229 84 0 chr2 1521666 1521749 -249166105 - L1M4 LINE L1 -3419 2727 2638 1973 266 35 38 chr2 1521761 1522599 -249165255 - MLT1D-int LTR MaLR -534 837 3 1945 136 14 33 chr2 1522605 1522966 -249164888 - THE1B LTR MaLR -10 354 1 2522 103 12 18 chr2 1522966 1523365 -249164489 - THE1B-int LTR MaLR 0 1580 1184 1657 238 41 19 chr2 1523374 1523858 -249163996 - MLT1D LTR MaLR -8 497 3 338 293 136 0 chr2 1524568 1524708 -249163146 - MIR SINE MIR -1 261 103 223 304 72 0 chr2 1525309 1525378 -249162476 + MIR SINE MIR 98 171 -91 21 71 0 0 chr2 1525661 1525703 -249162151 + AT_rich Low_complexity Low_complexity 1 42 0 2345 84 7 0 chr2 1526107 1526405 -249161449 + AluSg SINE Alu 6 305 -5 193 349 77 31 chr2 1526406 1526601 -249161253 - L2 LINE L2 -546 2768 2565 725 86 48 0 chr2 1526649 1526754 -249161100 + AluSg/x SINE Alu 189 298 -12 768 213 26 31 chr2 1527252 1527499 -249160355 - L1MA9 LINE L1 -6 6285 6042 26 0 0 0 chr2 1529498 1529524 -249158330 + AT_rich Low_complexity Low_complexity 1 26 0 2318 102 6 10 chr2 1529600 1529914 -249157940 - AluSq SINE Alu 0 313 1 681 216 14 56 chr2 1530345 1530558 -249157296 - MER3 DNA MER1_type -4 205 2 1804 27 5 0 chr2 1530812 1531031 -249156823 - L1PA4 LINE L1 -1 6154 5935 772 11 0 0 chr2 1531031 1531121 -249156733 + L1PA5 LINE L1 5795 5884 -270 202 204 0 23 chr2 1531283 1531327 -249156527 - L2 LINE L2 -4 3309 3267 180 0 0 0 chr2 1532036 1532056 -249155798 + (A)n Simple_repeat Simple_repeat 1 20 0 1802 158 3 34 chr2 1532593 1532915 -249154939 - AluJb SINE Alu 0 312 1 197 331 0 66 chr2 1532953 1533074 -249154780 - L2 LINE L2 -188 3125 3013 198 0 0 0 chr2 1533077 1533099 -249154755 + (GGAGA)n Simple_repeat Simple_repeat 5 26 0 2145 131 0 0 chr2 1533824 1534115 -249153739 - AluSx SINE Alu -21 291 1 1906 47 0 0 chr2 1534408 1534641 -249153213 - L1PA7 LINE L1 -3 6151 5919 321 314 83 70 chr2 1534732 1535118 -249152736 + L1 LINE L1 3850 4240 -1906 368 325 145 21 chr2 1535164 1535632 -249152222 + L1 LINE L1 4312 4837 -1309 1047 197 33 44 chr2 1535632 1535753 -249152101 - MLT1C LTR MaLR -3 464 343 1970 128 60 28 chr2 1535753 1536106 -249151748 + THE1B LTR MaLR 1 364 0 1047 197 33 44 chr2 1536106 1536258 -249151596 - MLT1C LTR MaLR -124 343 194 434 209 62 16 chr2 1536274 1536323 -249151531 - MLT1C LTR MaLR -332 135 90 1253 191 38 107 chr2 1536323 1536715 -249151139 + MLT1A1 LTR MaLR 1 365 0 434 209 62 16 chr2 1536715 1536794 -249151060 - MLT1C LTR MaLR -377 90 1 182 387 84 0 chr2 1537597 1537716 -249150138 - L3 LINE CR1 -101 1476 1348 183 129 0 0 chr2 1537983 1538014 -249149840 + (TG)n Simple_repeat Simple_repeat 2 32 0 314 255 113 19 chr2 1538323 1538429 -249149425 - MER63A DNA MER1_type -3 207 92 189 325 45 57 chr2 1538478 1538635 -249149219 - L3 LINE CR1 -523 1054 900 225 277 155 26 chr2 1538750 1538905 -249148949 - HAL1 LINE L1 0 2507 2333 1243 246 54 31 chr2 1538920 1539269 -249148585 + MLT1A2 LTR MaLR 18 374 0 2554 120 3 3 chr2 1539320 1539695 -249148159 - THE1C LTR MaLR 0 375 1 10074 121 32 7 chr2 1539695 1541236 -249146618 - THE1C-int LTR MaLR 0 1580 1 1217 134 19 14 chr2 1541236 1541452 -249146402 - THE1C LTR MaLR 0 375 159 478 321 67 30 chr2 1541453 1541721 -249146133 - HAL1 LINE L1 -1995 512 235 596 294 110 30 chr2 1541728 1542163 -249145691 - L2 LINE L2 -411 2903 2434 21 36 0 0 chr2 1543717 1543745 -249144109 + AT_rich Low_complexity Low_complexity 1 28 0 309 323 119 27 chr2 1543789 1544083 -249143771 + L1 LINE L1 4508 4828 -1318 362 251 6 0 chr2 1544771 1544950 -249142904 + CT-rich Low_complexity Low_complexity 1 180 0 1445 181 24 38 chr2 1545727 1546019 -249141835 + AluJb SINE Alu 6 293 -19 305 274 129 8 chr2 1546683 1546807 -249141047 + MIR3 SINE MIR 31 169 -39 32 43 0 0 chr2 1547501 1547547 -249140307 + AT_rich Low_complexity Low_complexity 1 46 0 492 386 58 11 chr2 1547682 1548115 -249139739 - L2 LINE L2 -2139 1175 723 209 268 24 37 chr2 1548161 1548243 -249139611 - L2 LINE L2 -1316 1998 1918 180 0 0 0 chr2 1549568 1549588 -249138266 + (T)n Simple_repeat Simple_repeat 1 20 0 279 277 193 0 chr2 1549807 1549926 -249137928 + MIR SINE MIR 86 227 -35 291 29 0 0 chr2 1549961 1549996 -249137858 + U2 snRNA snRNA 1 35 -153 757 221 16 5 chr2 1550718 1550908 -249136946 - MLT1A2 LTR MaLR -2 372 181 2149 96 4 0 chr2 1550932 1551204 -249136650 - AluY SINE Alu -13 298 26 497 191 133 0 chr2 1551355 1551460 -249136394 - MLT1A2 LTR MaLR -255 119 1 496 250 114 5 chr2 1552744 1552964 -249134890 - LTR50 LTR ERVL 0 795 552 1088 90 13 0 chr2 1552967 1553123 -249134731 + LTR19A LTR ERV1 288 445 -41 216 86 0 0 chr2 1553124 1553159 -249134695 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 379 246 210 6 chr2 1553241 1553401 -249134453 - LTR50 LTR ERVL -330 465 272 1223 243 144 68 chr2 1553401 1553805 -249134049 + MLT1F1 LTR MaLR 1 456 -111 2746 168 10 12 chr2 1553805 1554292 -249133562 - MER66B LTR ERV1 0 486 1 1223 243 144 68 chr2 1554292 1554414 -249133440 + MLT1F1 LTR MaLR 456 567 0 2166 249 62 32 chr2 1555127 1556204 -249131650 - L1M4 LINE L1 -1031 5115 4007 542 244 53 22 chr2 1556233 1556458 -249131396 + L1M4 LINE L1 4417 4648 -1498 200 139 13 114 chr2 1556741 1556820 -249131034 + A-rich Low_complexity Low_complexity 3 73 0 1605 274 76 32 chr2 1557543 1558410 -249129444 - L1ME3A LINE L1 -10 6160 5258 1429 206 107 28 chr2 1558512 1558601 -249129253 + MER70A LTR ERVL 49 130 -342 1982 119 88 23 chr2 1558601 1558953 -249128901 - THE1C LTR MaLR 0 375 1 1429 206 107 28 chr2 1558953 1559256 -249128598 + MER70A LTR ERVL 130 472 0 5562 177 32 37 chr2 1559263 1560285 -249127569 - L1MB1 LINE L1 -81 6087 5062 2456 86 0 0 chr2 1560285 1560586 -249127268 + AluY SINE Alu 1 301 -10 5562 177 32 37 chr2 1560586 1561729 -249126125 - L1MB1 LINE L1 -1106 5062 3928 198 355 12 70 chr2 1562338 1562510 -249125344 - L2 LINE L2 -182 3090 2929 907 185 67 6 chr2 1562729 1562907 -249124947 - MER5A DNA MER1_type 0 189 1 396 283 83 21 chr2 1563581 1563726 -249124128 + MIR SINE MIR 72 225 -37 1902 157 10 3 chr2 1563893 1564199 -249123655 - AluSx SINE Alu -4 308 1 237 246 79 44 chr2 1565513 1565627 -249122227 - MIR SINE MIR -5 257 140 198 301 14 27 chr2 1565670 1565743 -249122111 - MIR SINE MIR -121 141 70 21 0 0 0 chr2 1566219 1566240 -249121614 + AT_rich Low_complexity Low_complexity 1 21 0 277 260 85 8 chr2 1566390 1566509 -249121345 + MIR SINE MIR 57 186 -68 189 260 31 94 chr2 1568459 1568555 -249119299 - L2 LINE L2 -242 3030 2941 1142 258 35 29 chr2 1569173 1569549 -249118305 - L1ME3A LINE L1 -197 5973 5596 337 219 27 0 chr2 1569543 1569616 -249118238 + L1ME LINE L1 5573 5647 -519 * 1978 114 92 33 chr2 1569653 1570013 -249117841 - MSTA LTR MaLR -47 381 1 357 64 0 0 chr2 1570013 1570060 -249117794 + L1ME LINE L1 5643 5689 -477 784 344 61 44 chr2 1570060 1570198 -249117656 - L1MEc LINE L1 -4827 1569 1435 2421 117 17 6 chr2 1570198 1570558 -249117296 - THE1B LTR MaLR 0 364 1 784 344 61 44 chr2 1570558 1571174 -249116680 - L1MEc LINE L1 -4961 1435 802 219 277 91 130 chr2 1572176 1572584 -249115270 + L3 LINE CR1 1083 1474 -103 199 154 19 19 chr2 1573219 1573271 -249114583 + (TAA)n Simple_repeat Simple_repeat 3 54 0 287 340 47 0 chr2 1573363 1573469 -249114385 - MIR SINE MIR -67 141 31 196 269 156 54 chr2 1574491 1574677 -249113177 - MIR SINE MIR -26 236 32 214 403 8 8 chr2 1575139 1575263 -249112591 + MIR SINE MIR 25 148 -114 593 88 0 0 chr2 1576316 1576396 -249111458 + MADE1 DNA Mariner 1 80 0 230 200 0 33 chr2 1577774 1577834 -249110020 - L1MC4 LINE L1 -1339 6703 6646 1815 254 106 89 chr2 1578341 1579500 -249108354 + MER69B DNA AcHobo 8 1186 -40 878 286 119 11 chr2 1579641 1580018 -249107836 - LTR16C LTR ERVL 0 491 74 22 0 0 0 chr2 1580890 1580912 -249106942 + AT_rich Low_complexity Low_complexity 1 22 0 5058 41 3 3 chr2 1581257 1581872 -249105982 - L1PA5 LINE L1 -1 6153 5539 1005 67 0 7 chr2 1581872 1582007 -249105847 + L1P LINE L1 2221 2354 -3792 240 330 52 10 chr2 1582156 1582253 -249105601 + L2 LINE L2 3172 3272 0 198 0 0 0 chr2 1583005 1583027 -249104827 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 2319 105 13 0 chr2 1583336 1583641 -249104213 + AluSx SINE Alu 1 309 -3 378 146 31 52 chr2 1585390 1585486 -249102368 - MLT1K LTR MaLR -4 584 491 4657 219 38 36 chr2 1585507 1586728 -249101126 + L1PA16 LINE L1 4124 5346 -800 3548 29 0 0 chr2 1586724 1587138 -249100716 + L1PA5 LINE L1 5611 6024 -130 * 2738 166 144 11 chr2 1587242 1587798 -249100056 + L1PA16 LINE L1 5535 6164 -2 243 304 14 0 chr2 1588024 1588093 -249099761 - MLT1K LTR MaLR -387 201 132 2766 204 76 40 chr2 1588595 1589481 -249098373 - L1MDa LINE L1 -4018 2522 1605 914 317 3 26 chr2 1589520 1589861 -249097993 - L1MDa LINE L1 -6145 395 63 207 366 41 24 chr2 1590290 1590413 -249097441 + MIR SINE MIR 20 144 -118 33 43 0 0 chr2 1592370 1592417 -249095437 + AT_rich Low_complexity Low_complexity 1 47 0 232 97 56 14 chr2 1592440 1592512 -249095342 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 25 0 0 0 chr2 1592532 1592557 -249095297 + AT_rich Low_complexity Low_complexity 1 25 0 347 120 57 34 chr2 1592564 1592739 -249095115 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 41 36 0 0 chr2 1592748 1592803 -249095051 + AT_rich Low_complexity Low_complexity 1 55 0 1499 251 101 25 chr2 1593447 1594323 -249093531 - Charlie2a DNA MER1_type -1252 1610 632 2071 113 0 0 chr2 1594702 1595058 -249092796 + AluSx SINE Alu 1 356 0 1500 140 61 0 chr2 1595317 1595581 -249092273 - L1PA15 LINE L1 -6 6159 5880 276 111 0 0 chr2 1597277 1597322 -249090532 + (TG)n Simple_repeat Simple_repeat 1 45 0 217 303 118 17 chr2 1600349 1600468 -249087386 + MIR SINE MIR 21 151 -57 251 338 23 15 chr2 1600562 1600695 -249087159 + MIR SINE MIR 21 154 -108 286 292 15 8 chr2 1600841 1600971 -249086883 + (TA)n Simple_repeat Simple_repeat 2 132 0 27 81 0 0 chr2 1601721 1601783 -249086071 + AT_rich Low_complexity Low_complexity 1 62 0 486 288 22 84 chr2 1602819 1603045 -249084809 + MIR SINE MIR 30 241 -21 12816 214 64 26 chr2 1604605 1607283 -249080571 - L1MA8 LINE L1 -6 7245 4670 2144 101 7 3 chr2 1607283 1607615 -249080239 + AluSx SINE Alu 1 333 0 12816 214 64 26 chr2 1607615 1608119 -249079735 - L1MA8 LINE L1 -2581 4670 4186 231 36 0 0 chr2 1608119 1608147 -249079707 + (CA)n Simple_repeat Simple_repeat 2 29 0 12816 214 64 26 chr2 1608147 1609189 -249078665 - L1MA8 LINE L1 -3065 4186 3185 1516 189 11 25 chr2 1609189 1609474 -249078380 + AluJo SINE Alu 1 281 -31 297 0 0 0 chr2 1609482 1609515 -249078339 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 12816 214 64 26 chr2 1609515 1610749 -249077105 - L1MA8 LINE L1 -4072 3179 1782 2269 110 3 0 chr2 1610749 1611058 -249076796 - AluSg SINE Alu 0 310 1 12816 214 64 26 chr2 1611058 1611809 -249076045 - L1MA8 LINE L1 -5469 1782 1061 31 26 0 0 chr2 1612272 1612310 -249075544 + AT_rich Low_complexity Low_complexity 1 38 0 319 333 60 20 chr2 1613055 1613205 -249074649 - MIR SINE MIR -88 174 19 1352 287 100 22 chr2 1614855 1615357 -249072497 + MLT1F LTR MaLR 1 541 -1 1639 158 55 7 chr2 1615482 1615754 -249072100 + LTR32 LTR ERVL 21 305 -166 25 75 0 0 chr2 1615965 1616018 -249071836 + AT_rich Low_complexity Low_complexity 1 53 0 216 182 0 0 chr2 1616222 1616266 -249071588 + CT-rich Low_complexity Low_complexity 1 44 0 189 196 0 0 chr2 1616271 1616317 -249071537 + (TCCA)n Simple_repeat Simple_repeat 3 48 0 1744 198 78 16 chr2 1616469 1616852 -249071002 + MLT2C2 LTR ERVL 1 407 -57 509 145 0 0 chr2 1616894 1616970 -249070884 + HSMAR2 DNA Mariner 645 720 -582 1612 166 39 65 chr2 1616970 1617355 -249070499 - THE1C LTR MaLR 0 375 1 7002 194 115 4 chr2 1617355 1618839 -249069015 - THE1C-int LTR MaLR 0 1651 3 944 157 6 18 chr2 1618842 1619008 -249068846 - THE1C LTR MaLR -4 371 208 1370 214 25 4 chr2 1619008 1619288 -249068566 - MER101B-int LTR ERV1 -6045 286 1 249 223 43 75 chr2 1619942 1620036 -249067818 - MER101B LTR ERV1 -9 561 471 1140 165 38 104 chr2 1620137 1620453 -249067401 - MER101B LTR ERV1 -275 295 1 1846 143 49 0 chr2 1620500 1620787 -249067067 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr2 1620939 1620961 -249066893 + AT_rich Low_complexity Low_complexity 1 22 0 4859 152 19 14 chr2 1620965 1621795 -249066059 - L1PA16 LINE L1 -7 6159 5326 2782 205 8 2 chr2 1621798 1622393 -249065461 + L1P LINE L1 4698 5296 -858 21 82 0 0 chr2 1622393 1622442 -249065412 + AT_rich Low_complexity Low_complexity 1 49 0 184 344 11 44 chr2 1622623 1622713 -249065141 - L2 LINE L2 0 3272 3186 2377 100 0 0 chr2 1624661 1624962 -249062892 + AluSx SINE Alu 1 301 -11 43 76 0 0 chr2 1625028 1625120 -249062734 + AT_rich Low_complexity Low_complexity 1 92 0 308 173 73 100 chr2 1625294 1625404 -249062450 - MLT1F LTR MaLR -433 109 3 2744 132 144 33 chr2 1625594 1626134 -249061720 + MER4A LTR ERV1 1 600 0 29 28 0 0 chr2 1626304 1626340 -249061514 + AT_rich Low_complexity Low_complexity 1 36 0 1061 274 79 48 chr2 1626593 1627474 -249060380 - L1ME3 LINE L1 -2 6160 5239 33 25 0 0 chr2 1627564 1627604 -249060250 + AT_rich Low_complexity Low_complexity 1 40 0 11190 179 25 27 chr2 1627607 1627742 -249060112 - L1MA4 LINE L1 -24 7695 7561 1061 104 31 0 chr2 1627742 1627905 -249059949 - L1PA10 LINE L1 -2 6166 5999 11190 179 25 27 chr2 1627905 1628302 -249059552 - L1MA4 LINE L1 -158 7561 7164 2375 81 0 7 chr2 1628302 1628611 -249059243 - AluY SINE Alu -3 308 2 11190 179 25 27 chr2 1628611 1631368 -249056486 - L1MA4 LINE L1 -555 7164 4422 1532 178 79 34 chr2 1631371 1631782 -249056072 + THE1C LTR MaLR 1 375 0 985 198 18 0 chr2 1631782 1631999 -249055855 - L1MA4 LINE L1 -3142 4423 4203 1195 175 123 26 chr2 1631999 1632262 -249055592 - MSTA LTR MaLR 0 428 140 1697 102 159 8 chr2 1632262 1632603 -249055251 - LTR7 LTR ERV1 0 450 1 688 200 0 0 chr2 1632607 1632732 -249055122 - MSTA LTR MaLR -301 125 1 7518 213 49 5 chr2 1632734 1634309 -249053545 - MSTB-int LTR MaLR -5 1646 3 1921 189 83 8 chr2 1634311 1634707 -249053147 - MSTB LTR MaLR 0 426 1 8868 199 41 55 chr2 1634707 1635885 -249051969 - L1MA4 LINE L1 -3358 4207 3013 1584 188 3 20 chr2 1635885 1636178 -249051676 - AluJb SINE Alu -24 288 1 8868 199 41 55 chr2 1636178 1636376 -249051478 - L1MA4 LINE L1 -4552 3013 2814 279 0 0 0 chr2 1636376 1636407 -249051447 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8868 199 41 55 chr2 1636407 1638599 -249049255 - L1MA4 LINE L1 -4751 2814 12 1056 257 107 59 chr2 1638684 1639623 -249048231 - L1M4 LINE L1 -1053 5093 4110 320 242 33 33 chr2 1639686 1639777 -249048077 - L1MC4 LINE L1 -479 7563 7473 1316 285 79 31 chr2 1639993 1640909 -249046945 - L1M4 LINE L1 -1264 4951 3992 457 276 84 54 chr2 1640957 1641483 -249046371 - L1MEc LINE L1 -3630 2585 2086 21 0 0 0 chr2 1641729 1641750 -249046104 + AT_rich Low_complexity Low_complexity 1 21 0 1900 166 7 0 chr2 1642013 1642314 -249045540 + AluSx SINE Alu 1 303 -9 2123 119 3 19 chr2 1642450 1642761 -249045093 - AluSx SINE Alu -6 306 1 194 0 39 0 chr2 1643075 1643101 -249044753 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1680 231 44 20 chr2 1643215 1643666 -249044188 + MLT1C LTR MaLR 6 467 0 697 302 91 28 chr2 1644231 1644516 -249043338 + MLT1H1 LTR MaLR 1 303 -252 514 228 37 29 chr2 1644578 1644714 -249043140 + MER58B DNA MER1_type 204 340 -1 359 233 95 9 chr2 1644803 1644925 -249042929 + MLT1H1 LTR MaLR 433 554 -1 667 292 56 9 chr2 1645144 1645360 -249042494 - MIR SINE MIR -23 239 14 351 0 0 0 chr2 1645711 1645750 -249042104 + (TA)n Simple_repeat Simple_repeat 1 39 0 857 315 113 5 chr2 1645786 1646167 -249041687 - MER70B LTR ERVL -153 425 4 187 280 70 50 chr2 1647505 1647605 -249040249 + MIR SINE MIR 28 129 -133 2326 88 0 23 chr2 1647664 1647972 -249039882 + AluSx SINE Alu 1 301 -11 510 31 0 0 chr2 1648282 1648346 -249039508 + (TG)n Simple_repeat Simple_repeat 1 64 0 28 48 0 0 chr2 1648628 1648670 -249039184 + AT_rich Low_complexity Low_complexity 1 42 0 270 0 0 0 chr2 1649046 1649076 -249038778 + (TG)n Simple_repeat Simple_repeat 1 30 0 1526 171 45 48 chr2 1649210 1649520 -249038334 - AluJo SINE Alu -3 309 1 1881 221 97 34 chr2 1649665 1650250 -249037604 + MLT1E3 LTR MaLR 3 624 0 338 271 123 43 chr2 1651485 1651810 -249036044 - L1ME4a LINE L1 -106 6015 5665 2314 104 0 3 chr2 1652183 1652492 -249035362 - AluSc SINE Alu -1 308 1 399 184 0 0 chr2 1652551 1652638 -249035216 + CT-rich Low_complexity Low_complexity 4 90 0 1076 128 0 6 chr2 1652761 1652883 -249034971 + (TTC)n Simple_repeat Simple_repeat 1 300 0 1076 128 0 6 chr2 1652883 1653063 -249034791 + (TTC)n Simple_repeat Simple_repeat 1 179 0 911 171 23 27 chr2 1653275 1653484 -249034370 - L1PA8 LINE L1 -13 6142 5937 1716 154 3 43 chr2 1653484 1653783 -249034071 + Tigger4(Zombi) DNA MER2_type 1215 1501 -1230 4478 59 10 0 chr2 1653783 1654360 -249033494 - L1PA8A LINE L1 -186 5945 5363 442 200 45 18 chr2 1654790 1654900 -249032954 - LTR37B LTR ERV1 -159 309 197 449 326 20 31 chr2 1655392 1655588 -249032266 - MER63A DNA MER1_type -16 194 1 189 302 48 56 chr2 1655697 1655823 -249032031 - MER5A DNA MER1_type -35 154 30 * 235 286 0 0 chr2 1655780 1655836 -249032018 + MER5A DNA MER1_type 128 183 -6 315 71 0 0 chr2 1656299 1656341 -249031513 + (TG)n Simple_repeat Simple_repeat 2 43 0 185 35 69 0 chr2 1657579 1657608 -249030246 + A-rich Low_complexity Low_complexity 2 32 0 480 48 0 0 chr2 1658482 1658545 -249029309 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 71 0 0 chr2 1659433 1659475 -249028379 + AT_rich Low_complexity Low_complexity 1 42 0 2582 27 7 3 chr2 1661257 1661558 -249026296 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 1661614 1661653 -249026201 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 1662193 1662230 -249025624 + AT_rich Low_complexity Low_complexity 1 37 0 1357 197 63 20 chr2 1662928 1663227 -249024627 - AluJb SINE Alu 0 312 1 285 242 34 22 chr2 1663410 1663470 -249024384 + (TA)n Simple_repeat Simple_repeat 1 59 -121 1260 149 10 0 chr2 1663470 1663678 -249024176 + MER6B DNA MER2_type 1 210 0 285 242 34 22 chr2 1663678 1663795 -249024059 + (TA)n Simple_repeat Simple_repeat 59 180 0 238 266 50 65 chr2 1663803 1663942 -249023912 - L1ME1 LINE L1 -102 6064 5928 256 331 87 29 chr2 1663944 1664116 -249023738 + L2 LINE L2 1773 1954 -1360 270 390 89 46 chr2 1664159 1664441 -249023413 + L2 LINE L2 2948 3241 -31 21 36 0 0 chr2 1665005 1665033 -249022821 + AT_rich Low_complexity Low_complexity 1 28 0 1125 230 71 43 chr2 1665868 1666289 -249021565 + MLT1D LTR MaLR 1 433 -72 184 316 51 0 chr2 1666323 1666402 -249021452 + MIR3 SINE MIR 83 165 -43 180 322 17 17 chr2 1666430 1666489 -249021365 - L2 LINE L2 -4 3309 3251 255 79 0 0 chr2 1666809 1666847 -249021007 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr2 1667082 1667107 -249020747 + AT_rich Low_complexity Low_complexity 1 25 0 340 332 118 16 chr2 1667176 1667549 -249020305 + MLT1L LTR MaLR 131 541 -74 1084 269 274 18 chr2 1668029 1668851 -249019003 - L1MC4 LINE L1 -205 7837 6806 378 230 18 9 chr2 1668856 1668969 -249018885 - L1MA4 LINE L1 -209 6091 5978 * 655 249 54 80 chr2 1668961 1669334 -249018520 - L1MC4 LINE L1 -1222 6820 6458 203 286 22 0 chr2 1670219 1670310 -249017544 + (TG)n Simple_repeat Simple_repeat 1 93 0 1001 127 0 6 chr2 1670511 1670573 -249017281 + (GGA)n Simple_repeat Simple_repeat 1 241 0 1001 127 0 6 chr2 1670573 1670754 -249017100 + (GGA)n Simple_repeat Simple_repeat 1 180 0 211 339 97 0 chr2 1671520 1671644 -249016210 - L2 LINE L2 -9 3304 3169 260 26 128 0 chr2 1671765 1671843 -249016011 + (TA)n Simple_repeat Simple_repeat 1 88 0 200 132 0 26 chr2 1672213 1672251 -249015603 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 1873 166 27 48 chr2 1673227 1673787 -249014067 - MLT2A2 LTR ERVL 0 554 1 219 263 100 25 chr2 1673866 1673946 -249013908 - MIR SINE MIR -73 189 104 1462 196 85 24 chr2 1674278 1674619 -249013235 + MLT1A1 LTR MaLR 4 365 0 25 51 0 0 chr2 1675150 1675189 -249012665 + AT_rich Low_complexity Low_complexity 1 39 0 210 319 69 0 chr2 1675868 1675940 -249011914 + L2 LINE L2 2413 2489 -825 241 333 32 51 chr2 1676517 1676673 -249011181 + L2 LINE L2 2686 2838 -476 2220 133 30 25 chr2 1676907 1677269 -249010585 + THE1B LTR MaLR 1 364 0 259 355 44 24 chr2 1678608 1678827 -249009027 - MIR SINE MIR -26 236 17 1749 189 97 8 chr2 1678874 1679265 -249008589 - MSTA LTR MaLR 0 428 3 6613 203 107 15 chr2 1679267 1680779 -249007075 - MSTB-int LTR MaLR 0 1651 1 1949 194 65 5 chr2 1680779 1681181 -249006673 - MSTB LTR MaLR 0 426 1 1033 260 97 26 chr2 1681230 1681727 -249006127 - LTR10B LTR ERV1 0 547 16 2806 98 51 5 chr2 1682263 1682691 -249005163 + MLT2A2 LTR ERVL 1 448 -5 10254 109 4 12 chr2 1682694 1683063 -249004791 + THE1B-int LTR MaLR 5 375 -1205 1804 136 0 0 chr2 1683063 1683314 -249004540 - AluSc SINE Alu -9 300 50 10254 109 4 12 chr2 1683314 1684471 -249003383 + THE1B-int LTR MaLR 375 1519 -61 3097 99 18 14 chr2 1684472 1684914 -249002940 - MLT2A1 LTR ERVL 0 444 1 40172 87 10 2 chr2 1684915 1685348 -249002506 - HERVL-A1 LTR ERVL -1 5653 5225 236 53 26 0 chr2 1685348 1685386 -249002468 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 40172 87 10 2 chr2 1685386 1690562 -248997292 - HERVL-A1 LTR ERVL -429 5225 1 3095 101 9 11 chr2 1690562 1691007 -248996847 - MLT2A1 LTR ERVL 0 444 1 448 77 0 0 chr2 1691007 1691072 -248996782 + THE1B-int LTR MaLR 1516 1580 0 2088 132 51 28 chr2 1691072 1691428 -248996426 + THE1B LTR MaLR 1 364 0 255 287 77 56 chr2 1692355 1692498 -248995356 + MIR SINE MIR 117 262 0 24 67 0 0 chr2 1694090 1694135 -248993719 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 1694417 1694439 -248993415 + AT_rich Low_complexity Low_complexity 1 22 0 578 272 110 0 chr2 1694762 1695016 -248992838 - L1M4 LINE L1 -2804 3342 3061 228 306 52 31 chr2 1695072 1695265 -248992589 - L1M4 LINE L1 -3715 2431 2235 3624 185 13 46 chr2 1695287 1696185 -248991669 - L1MB3 LINE L1 -2 6181 5313 * 3664 218 63 46 chr2 1696184 1697296 -248990558 - L1MC3 LINE L1 -743 5403 5096 1869 179 0 10 chr2 1697296 1697609 -248990245 + AluJb SINE Alu 3 312 0 3664 218 63 46 chr2 1697609 1698411 -248989443 - L1MC3 LINE L1 -1050 5096 4309 1291 232 57 21 chr2 1698423 1698897 -248988957 - L1MC3 LINE L1 -2042 4104 3614 2207 85 4 0 chr2 1699003 1699329 -248988525 + AluY SINE Alu 1 327 0 376 309 49 19 chr2 1699337 1699499 -248988355 + MER5B DNA MER1_type 1 167 -11 2158 176 39 28 chr2 1701683 1702143 -248985711 + MLT1C LTR MaLR 1 465 -2 2345 244 64 26 chr2 1702359 1703228 -248984626 + L1ME2 LINE L1 5254 6155 -9 323 256 57 81 chr2 1703257 1703468 -248984386 + L1MC4 LINE L1 7829 8034 -8 491 231 144 5 chr2 1704339 1704534 -248983320 - L1MA9 LINE L1 -38 6274 6053 234 310 0 0 chr2 1705978 1706049 -248981805 + MLT1J LTR MaLR 229 299 -212 238 234 85 0 chr2 1706974 1707068 -248980786 + LTR33A LTR ERVL 408 509 -14 272 356 34 0 chr2 1708865 1708983 -248978871 + MIR SINE MIR 138 259 -3 1975 121 32 0 chr2 1709018 1709299 -248978555 - AluSc SINE Alu -4 305 16 250 340 19 19 chr2 1710669 1710775 -248977079 - MIR3 SINE MIR -88 120 15 259 364 93 0 chr2 1711030 1711170 -248976684 + MIR SINE MIR 108 260 -2 529 363 28 4 chr2 1711187 1711438 -248976416 - MIR SINE MIR 0 262 6 1526 273 99 56 chr2 1711902 1712761 -248975093 + L2 LINE L2 2153 3036 -277 1419 172 23 15 chr2 1712776 1713038 -248974816 - AluJb SINE Alu -48 264 1 628 238 166 14 chr2 1713242 1713465 -248974389 + MER69 DNA AcHobo 275 531 -695 543 265 99 7 chr2 1713575 1713726 -248974128 - MIR SINE MIR -89 173 9 296 291 72 11 chr2 1713818 1713978 -248973876 - MIR SINE MIR -63 199 32 243 133 0 0 chr2 1714893 1714938 -248972916 + (CAT)n Simple_repeat Simple_repeat 3 47 0 303 330 61 0 chr2 1717892 1718007 -248969847 - L2 LINE L2 -9 3263 3142 1634 136 42 33 chr2 1718918 1719440 -248968414 + MER50 LTR ERV1 1 729 -5 254 255 49 39 chr2 1721654 1721756 -248966098 - MIR SINE MIR -56 206 104 2117 174 58 7 chr2 1721831 1722278 -248965576 + L1MC2 LINE L1 5850 6319 -25 26 50 0 0 chr2 1722616 1722656 -248965198 + AT_rich Low_complexity Low_complexity 1 40 0 479 307 131 27 chr2 1723451 1723862 -248963992 + L1MCc LINE L1 799 1252 -5171 402 174 35 0 chr2 1723886 1723972 -248963882 + L1MCc LINE L1 2318 2657 -4285 986 273 96 25 chr2 1723977 1724933 -248962921 + L1ME1 LINE L1 1729 2697 -3518 565 241 12 48 chr2 1724933 1725099 -248962755 - FRAM SINE Alu -6 160 1 994 241 113 12 chr2 1725100 1725597 -248962257 + L1ME1 LINE L1 2916 3462 -2753 849 262 53 37 chr2 1725627 1726058 -248961796 + L1ME1 LINE L1 4143 4580 -1635 935 260 138 28 chr2 1726112 1726637 -248961217 + L1ME1 LINE L1 5327 5895 -340 237 33 0 0 chr2 1726652 1726682 -248961172 + (TA)n Simple_repeat Simple_repeat 2 31 0 530 269 54 16 chr2 1726836 1727022 -248960832 + L1ME1 LINE L1 5989 6181 -54 2291 105 3 0 chr2 1727075 1727381 -248960473 - AluSq SINE Alu -6 307 1 446 186 0 10 chr2 1728425 1728522 -248959332 + GA-rich Low_complexity Low_complexity 2 97 0 1460 196 49 63 chr2 1730538 1730966 -248956888 - L1MA8 LINE L1 -93 6198 5777 248 155 103 38 chr2 1730938 1731018 -248956836 + L1MA8 LINE L1 6207 6291 0 * 24 0 0 0 chr2 1731021 1731045 -248956809 + AT_rich Low_complexity Low_complexity 1 24 0 207 228 0 51 chr2 1731629 1731708 -248956146 + T-rich Low_complexity Low_complexity 1 75 0 225 213 0 0 chr2 1732375 1732422 -248955432 + LTR67 LTR ERVL 509 555 -2 252 0 0 0 chr2 1732794 1732822 -248955032 + (TG)n Simple_repeat Simple_repeat 1 28 0 514 268 205 0 chr2 1734102 1734307 -248953547 - MIR SINE MIR -1 261 15 560 313 131 55 chr2 1734380 1734799 -248953055 - MLT1K LTR MaLR -135 453 3 190 327 0 0 chr2 1736027 1736082 -248951772 - MIR SINE MIR -14 248 194 2198 201 13 19 chr2 1736295 1736763 -248951091 + MLT1C LTR MaLR 1 465 -2 22 0 0 0 chr2 1738733 1738755 -248949099 + AT_rich Low_complexity Low_complexity 1 22 0 560 267 56 0 chr2 1739520 1739681 -248948173 + MLT-int LTR MaLR 596 765 -970 258 215 0 0 chr2 1739727 1739792 -248948062 + MER89 LTR ERV1 30 94 -465 279 160 20 0 chr2 1739869 1739919 -248947935 - MER34 LTR ERV1 -491 51 1 252 259 62 36 chr2 1740436 1740548 -248947306 + MER117 DNA MER1_type 3 117 -80 295 322 82 14 chr2 1741399 1741691 -248946163 + L1MC3 LINE L1 3681 3992 -2154 277 257 18 9 chr2 1741715 1741828 -248946026 + (TA)n Simple_repeat Simple_repeat 1 114 0 455 264 96 44 chr2 1741869 1742119 -248945735 + L1MC3 LINE L1 4062 4324 -1822 1441 194 26 23 chr2 1742133 1742437 -248945417 - MLT1A1 LTR MaLR -7 358 54 245 263 18 0 chr2 1742437 1742494 -248945360 - MST-int LTR MaLR -540 1111 1054 2261 251 44 18 chr2 1742509 1743126 -248944728 - MLT1A1-int LTR MaLR -970 765 133 1392 143 20 29 chr2 1743126 1743295 -248944559 - MSTA LTR MaLR 0 428 260 2275 145 3 6 chr2 1743295 1743660 -248944194 + THE1B LTR MaLR 1 364 0 1392 143 20 29 chr2 1743660 1743734 -248944120 - MSTA LTR MaLR -168 260 187 886 152 20 51 chr2 1743794 1743991 -248943863 - MSTA LTR MaLR -237 191 1 765 160 15 0 chr2 1743995 1744126 -248943728 - MLT1A1-int LTR MaLR -1602 133 1 1772 174 32 12 chr2 1744127 1744467 -248943387 - MLT1A1 LTR MaLR 0 365 19 1637 210 38 0 chr2 1744942 1745289 -248942565 - MLT1A1 LTR MaLR -2 363 4 265 318 46 23 chr2 1745302 1745519 -248942335 + L1MC3 LINE L1 4379 4600 -1546 1183 261 57 46 chr2 1745674 1746362 -248941492 + L1MC3 LINE L1 5467 6146 -1664 186 43 0 0 chr2 1746362 1746385 -248941469 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1183 261 57 46 chr2 1746385 1747426 -248940428 + L1MC3 LINE L1 6146 7174 -636 1804 138 4 8 chr2 1747426 1747686 -248940168 + AluSq SINE Alu 1 259 -54 1183 261 57 46 chr2 1747686 1747699 -248940155 + L1MC3 LINE L1 7174 7185 -625 222 37 0 0 chr2 1747699 1747726 -248940128 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1183 261 57 46 chr2 1747726 1748381 -248939473 + L1MC3 LINE L1 7185 7800 -10 290 154 66 55 chr2 1748579 1748670 -248939184 + L1ME3A LINE L1 6071 6162 -8 1784 178 3 0 chr2 1748682 1748975 -248938879 + AluJb SINE Alu 3 296 -16 5143 40 11 2 chr2 1749355 1749985 -248937869 - L1PA5 LINE L1 -4 6150 5515 365 239 0 22 chr2 1750130 1750222 -248937632 + L1MC4 LINE L1 6614 6703 -1339 382 102 87 0 chr2 1750225 1750352 -248937502 + (TA)n Simple_repeat Simple_repeat 1 138 0 1496 70 4 48 chr2 1750528 1750539 -248937315 - L1PA11 LINE L1 0 6174 6164 2234 92 0 22 chr2 1750539 1750854 -248937000 - AluSp SINE Alu -2 311 4 1496 70 4 48 chr2 1750854 1751072 -248936782 - L1PA11 LINE L1 -10 6164 5955 587 153 38 0 chr2 1751661 1751780 -248936074 - MLT1D LTR MaLR 0 505 396 318 26 0 0 chr2 1752606 1752645 -248935209 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 330 21 0 chr2 1752718 1752812 -248935042 + L3 LINE CR1 790 885 -692 21 0 0 0 chr2 1753764 1753785 -248934069 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 1755088 1755113 -248932741 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 1755382 1755410 -248932444 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 249 180 0 0 chr2 1755787 1755837 -248932017 + GA-rich Low_complexity Low_complexity 3 52 0 25 0 0 0 chr2 1756136 1756161 -248931693 + AT_rich Low_complexity Low_complexity 1 25 0 198 297 103 32 chr2 1757156 1757311 -248930543 + MIR SINE MIR 47 212 -50 234 0 0 0 chr2 1758775 1758801 -248929053 + (TG)n Simple_repeat Simple_repeat 1 26 0 251 263 13 40 chr2 1758807 1758883 -248928971 - MIR SINE MIR -115 147 74 443 296 100 71 chr2 1758933 1759213 -248928641 - L2 LINE L2 0 3313 3026 1387 253 31 14 chr2 1759563 1759986 -248927868 + MER63B DNA MER1_type 7 436 0 1508 43 5 0 chr2 1762358 1762546 -248925308 - AluY SINE Alu -4 307 119 29 0 0 0 chr2 1762656 1762685 -248925169 + AT_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr2 1763241 1763295 -248924559 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 1763317 1763345 -248924509 + AT_rich Low_complexity Low_complexity 1 28 0 191 402 12 12 chr2 1763437 1763519 -248924335 - MIR SINE MIR -161 101 20 3211 210 94 25 chr2 1763649 1764435 -248923419 - MER21B LTR ERV1 -11 852 13 193 320 154 0 chr2 1764439 1764517 -248923337 + L2 LINE L2 3164 3253 -19 3497 111 83 12 chr2 1764776 1765369 -248922485 - LTR24C LTR ERV1 0 635 1 5036 126 29 21 chr2 1765637 1766500 -248921354 - MER4D LTR ERV1 -2 870 1 2574 58 0 0 chr2 1766534 1766845 -248921009 + AluY SINE Alu 1 311 0 1404 277 25 11 chr2 1766911 1767355 -248920499 + Charlie1a DNA MER1_type 1 450 -1005 450 286 19 33 chr2 1767355 1767565 -248920289 + L1ME LINE L1 4574 4780 -1366 2904 143 24 24 chr2 1767597 1767717 -248920137 - MLT2A1 LTR ERVL 0 515 396 279 0 0 0 chr2 1767717 1767748 -248920106 + (TA)n Simple_repeat Simple_repeat 1 31 0 2904 143 24 24 chr2 1767748 1768134 -248919720 - MLT2A1 LTR ERVL -119 396 1 922 249 46 92 chr2 1768138 1768487 -248919367 - MLT1A2 LTR MaLR -21 353 21 904 178 51 0 chr2 1768505 1768662 -248919192 - MER72 LTR ERV1 -557 165 1 373 345 65 50 chr2 1768662 1768984 -248918870 + L1ME LINE L1 4966 5292 -854 240 254 17 0 chr2 1769041 1769100 -248918754 + GA-rich Low_complexity Low_complexity 1 60 0 297 341 75 26 chr2 1769139 1769523 -248918331 + L1ME LINE L1 5457 5859 -311 340 104 0 0 chr2 1769626 1769674 -248918180 - AluY SINE Alu -219 82 35 764 189 7 0 chr2 1769697 1769848 -248918006 - MLT1A2 LTR MaLR 0 390 237 182 387 32 8 chr2 1769962 1770086 -248917768 + MIR3 SINE MIR 14 140 -68 29 28 0 0 chr2 1770668 1770704 -248917150 + AT_rich Low_complexity Low_complexity 1 36 0 183 80 0 0 chr2 1770985 1771010 -248916844 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 363 271 66 36 chr2 1771031 1771197 -248916657 - L1ME LINE L1 -382 5739 5569 208 287 278 9 chr2 1771276 1771391 -248916463 + MER5A DNA MER1_type 44 189 0 346 303 10 0 chr2 1772079 1772178 -248915676 - MER5A DNA MER1_type -80 109 10 234 281 70 126 chr2 1772344 1772543 -248915311 + MIR SINE MIR 3 190 -72 2023 138 7 0 chr2 1774032 1774330 -248913524 + AluSx SINE Alu 2 301 -11 1870 118 47 4 chr2 1774808 1775087 -248912767 + AluSx SINE Alu 1 291 -21 464 254 114 55 chr2 1775104 1775162 -248912692 - MIR SINE MIR -2 260 207 252 86 0 0 chr2 1775162 1775197 -248912657 + (CA)n Simple_repeat Simple_repeat 2 36 0 464 254 114 55 chr2 1775197 1775374 -248912480 - MIR SINE MIR -55 207 11 28 0 0 0 chr2 1776512 1776540 -248911314 + AT_rich Low_complexity Low_complexity 1 28 0 185 298 48 0 chr2 1776696 1776780 -248911074 - L2 LINE L2 -2882 432 345 2272 256 44 50 chr2 1777381 1778039 -248909815 - L1MD3 LINE L1 -13 8400 7769 2812 6 0 10 chr2 1778039 1778352 -248909502 + AluY SINE Alu 1 310 -1 2272 256 44 50 chr2 1778352 1778540 -248909314 - L1MD3 LINE L1 -644 7769 7581 3351 138 27 0 chr2 1778543 1779265 -248908589 + L1P5 LINE L1 5053 5791 -360 219 114 0 0 chr2 1779271 1779306 -248908548 + (TA)n Simple_repeat Simple_repeat 2 36 0 263 104 0 21 chr2 1779309 1779357 -248908497 + L1P5 LINE L1 5784 5830 -321 2510 115 0 0 chr2 1779506 1779870 -248907984 + L1PB1 LINE L1 5788 6151 0 4379 248 75 43 chr2 1779877 1780002 -248907852 - L1MD3 LINE L1 -757 5807 5687 1382 213 10 30 chr2 1780002 1780298 -248907556 - AluJb SINE Alu -22 290 1 4379 248 75 43 chr2 1780298 1781601 -248906253 - L1MD3 LINE L1 -877 5687 6055 966 8 24 0 chr2 1781601 1781724 -248906130 + (TCTA)n Simple_repeat Simple_repeat 3 128 0 4379 248 75 43 chr2 1781724 1782451 -248905403 - L1MD3 LINE L1 -508 6056 5354 288 214 0 0 chr2 1782451 1782507 -248905347 - L1 LINE L1 -1329 5235 5180 25 31 0 0 chr2 1782523 1782555 -248905299 + AT_rich Low_complexity Low_complexity 1 32 0 6470 141 9 9 chr2 1782559 1783997 -248903857 - L1MA3 LINE L1 -1 7723 6287 * 9724 181 23 13 chr2 1783989 1785704 -248902150 - L1MA3 LINE L1 -5821 1744 13 4693 234 39 6 chr2 1785711 1786980 -248900874 - L1 LINE L1 -1364 6201 4892 285 200 0 17 chr2 1786978 1787038 -248900816 - L1M4c LINE L1 -6320 64 6 * 1405 291 43 33 chr2 1787023 1787833 -248900021 - L1MD3 LINE L1 -2181 4383 3566 238 125 18 36 chr2 1788469 1788525 -248899329 - L1MCc LINE L1 -6105 318 264 340 283 25 69 chr2 1788565 1788724 -248899130 - L1MD3 LINE L1 -5889 156 5 10287 90 5 16 chr2 1788969 1790745 -248897109 + L1P3 LINE L1 3875 5643 -511 298 38 0 113 chr2 1790744 1790797 -248897057 + L1PA7 LINE L1 6108 6154 0 * 391 244 41 32 chr2 1791861 1791984 -248895870 + MER5B DNA MER1_type 1 124 -54 375 23 0 0 chr2 1792109 1792153 -248895701 + (TG)n Simple_repeat Simple_repeat 1 44 0 1242 233 66 3 chr2 1792710 1793015 -248894839 + MLT1A1 LTR MaLR 1 324 -41 222 383 28 0 chr2 1793044 1793151 -248894703 + MIR SINE MIR 34 143 -65 202 307 93 21 chr2 1793346 1793486 -248894368 + L2 LINE L2 2671 2820 -494 355 333 32 43 chr2 1793532 1793718 -248894136 + MIR SINE MIR 8 191 -71 3073 223 55 43 chr2 1794199 1794889 -248892965 - L1MB5 LINE L1 -8 6166 5486 940 227 44 86 chr2 1794889 1795298 -248892556 - MSTD LTR MaLR 0 396 5 3073 223 55 43 chr2 1795298 1796305 -248891549 - L1MB5 LINE L1 -688 5486 4442 322 344 56 8 chr2 1798118 1798243 -248889611 + L2 LINE L2 3142 3272 0 312 262 76 81 chr2 1798315 1798525 -248889329 + L2 LINE L2 3101 3309 -4 453 293 6 17 chr2 1799684 1799865 -248887989 + C-rich Low_complexity Low_complexity 2 180 0 403 80 0 0 chr2 1800029 1800079 -248887775 - MER51B LTR ERV1 0 377 328 876 224 9 39 chr2 1800082 1800314 -248887540 - L1ME LINE L1 -370 6294 6070 523 272 76 31 chr2 1800320 1800544 -248887310 - MER2 DNA MER2_type -8 337 104 292 93 0 0 chr2 1800574 1800617 -248887237 + MADE1 DNA Mariner 38 80 0 486 217 47 9 chr2 1800626 1800732 -248887122 - MER2 DNA MER2_type -234 111 2 402 158 40 59 chr2 1800735 1800836 -248887018 - L1ME LINE L1 -610 6072 5974 725 141 0 8 chr2 1800836 1800964 -248886890 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 3069 267 40 62 chr2 1800974 1802925 -248884929 - L1ME LINE L1 -743 5901 4067 607 291 36 40 chr2 1803009 1803484 -248884370 - L1ME LINE L1 -5195 1347 875 180 0 0 0 chr2 1803488 1803508 -248884346 + (TG)n Simple_repeat Simple_repeat 2 21 0 1923 178 15 3 chr2 1803508 1803850 -248884004 - MER7A DNA MER2_type -1 345 2 303 340 118 30 chr2 1803917 1804246 -248883608 - L1ME LINE L1 -5667 875 518 267 269 15 60 chr2 1804439 1804573 -248883281 - L1ME LINE L1 -6316 226 99 12859 160 43 11 chr2 1804827 1807171 -248880683 + Tigger1 DNA MER2_type 1 2418 0 284 326 11 42 chr2 1809061 1809201 -248878653 + MIR SINE MIR 2 139 -69 188 238 63 32 chr2 1809573 1809636 -248878218 + L3 LINE CR1 1479 1543 -34 246 280 140 11 chr2 1809661 1809754 -248878100 + L2 LINE L2 3199 3303 -10 457 139 40 0 chr2 1809984 1810085 -248877769 + (TATG)n Simple_repeat Simple_repeat 2 106 0 22 0 0 0 chr2 1810353 1810375 -248877479 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 1811054 1811077 -248876777 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1919 176 3 0 chr2 1811715 1812017 -248875837 - AluJb SINE Alu -9 303 1 873 103 5 43 chr2 1812454 1812639 -248875215 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2328 97 0 3 chr2 1814364 1814673 -248873181 - AluSc SINE Alu -1 308 1 207 88 0 0 chr2 1814982 1815016 -248872838 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 233 254 0 0 chr2 1816178 1816237 -248871617 + MLT1K LTR MaLR 530 588 0 392 118 65 30 chr2 1816736 1816905 -248870949 + (TA)n Simple_repeat Simple_repeat 1 175 0 236 201 25 19 chr2 1816908 1817067 -248870787 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 3276 55 19 3 chr2 1817175 1817720 -248870134 - L1P2 LINE L1 -431 5723 5171 1333 203 103 29 chr2 1818599 1818939 -248868915 - MLT1A1 LTR MaLR 0 365 1 349 212 0 50 chr2 1819218 1819316 -248868538 - MIR SINE MIR -64 144 68 591 183 25 0 chr2 1819683 1819803 -248868051 + MER58B DNA MER1_type 219 341 0 245 321 119 8 chr2 1821346 1821480 -248866374 + L2 LINE L2 3164 3312 -1 22 0 0 0 chr2 1821489 1821511 -248866343 + AT_rich Low_complexity Low_complexity 1 22 0 2501 68 0 3 chr2 1821952 1822262 -248865592 - AluY SINE Alu -2 309 1 4168 29 0 0 chr2 1822490 1822979 -248864875 + L1PA4 LINE L1 5664 6152 -3 1804 223 10 83 chr2 1823175 1823762 -248864092 + MER52A LTR ERV1 1207 1750 -5 1438 247 5 27 chr2 1823767 1824136 -248863718 + MLT1A1 LTR MaLR 3 363 -2 428 239 0 0 chr2 1824917 1825009 -248862845 - MIR3 SINE MIR -14 194 103 353 376 65 0 chr2 1826103 1826273 -248861581 + MIR SINE MIR 9 189 -73 299 65 22 0 chr2 1826614 1826660 -248861194 + (TC)n Simple_repeat Simple_repeat 2 48 0 327 136 0 0 chr2 1826696 1826755 -248861099 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 418 231 115 13 chr2 1827302 1827458 -248860396 - MLT1K LTR MaLR -32 556 385 1090 215 88 61 chr2 1827678 1827711 -248860143 - MLT2D LTR ERVL -6 408 377 297 0 0 0 chr2 1827711 1827744 -248860110 + (TG)n Simple_repeat Simple_repeat 1 33 0 1090 215 88 61 chr2 1827744 1827755 -248860099 - MLT2D LTR ERVL -37 377 368 186 43 0 0 chr2 1827755 1827778 -248860076 + (GA)n Simple_repeat Simple_repeat 2 24 0 1090 215 88 61 chr2 1827778 1828053 -248859801 - MLT2D LTR ERVL -46 368 72 1808 144 28 0 chr2 1828053 1828337 -248859517 - AluSg SINE Alu -12 298 7 1090 215 88 61 chr2 1828337 1828411 -248859443 - MLT2D LTR ERVL -342 72 2 207 139 0 0 chr2 1828523 1828559 -248859295 + (CA)n Simple_repeat Simple_repeat 2 37 0 221 237 0 13 chr2 1829205 1829281 -248858573 + GA-rich Low_complexity Low_complexity 3 77 0 233 272 224 8 chr2 1829646 1829771 -248858083 - MIR SINE MIR -11 251 100 396 0 0 0 chr2 1830188 1830232 -248857622 + (CA)n Simple_repeat Simple_repeat 2 45 0 246 136 0 0 chr2 1830847 1830891 -248856963 + (TG)n Simple_repeat Simple_repeat 1 44 0 226 250 190 40 chr2 1831743 1831843 -248856011 + L2 LINE L2 3158 3272 0 2038 127 3 0 chr2 1832059 1832363 -248855491 + AluSx SINE Alu 1 305 0 243 264 77 0 chr2 1832468 1832559 -248855295 + L1ME LINE L1 86 183 -5887 1790 262 90 43 chr2 1832696 1833784 -248854070 + L1M4 LINE L1 3696 4834 -1312 908 249 49 42 chr2 1833797 1834115 -248853739 + L1ME LINE L1 3975 4298 -1782 2612 46 0 0 chr2 1834115 1834417 -248853437 - AluY SINE Alu -9 302 1 908 249 49 42 chr2 1834417 1834527 -248853327 + L1ME LINE L1 4298 4406 -1674 337 265 90 11 chr2 1834511 1834779 -248853075 + L1ME LINE L1 4957 5245 -835 * 555 271 16 0 chr2 1834853 1835102 -248852752 + L1ME LINE L1 5259 5605 -450 1749 178 35 22 chr2 1835408 1835778 -248852076 - THE1C LTR MaLR 0 375 1 315 349 84 21 chr2 1835933 1836171 -248851683 - MIR SINE MIR -9 253 1 245 345 12 0 chr2 1836308 1836392 -248851462 - L3 LINE CR1 -346 1231 1147 24 0 0 0 chr2 1837443 1837467 -248850387 + AT_rich Low_complexity Low_complexity 1 24 0 187 240 20 20 chr2 1837806 1837856 -248849998 - MIR SINE MIR -63 199 150 6313 93 12 1 chr2 1838667 1839648 -248848206 + L1PA8 LINE L1 5175 6165 -7 240 301 108 0 chr2 1839765 1839858 -248847996 - MIR SINE MIR -35 227 125 199 317 131 7 chr2 1840086 1840231 -248847623 - MIR SINE MIR -37 225 63 33 0 0 0 chr2 1840981 1841014 -248846840 + AT_rich Low_complexity Low_complexity 1 33 0 390 42 0 0 chr2 1843998 1844046 -248843808 + (CAATT)n Simple_repeat Simple_repeat 2 49 0 40462 34 27 1 chr2 1844383 1850378 -248837476 + L1PA2 LINE L1 1 6154 -1 2187 139 0 0 chr2 1852473 1852774 -248835080 - AluSx SINE Alu -9 303 3 246 242 180 31 chr2 1853851 1853979 -248833875 - MIR SINE MIR 0 262 116 336 48 0 0 chr2 1854702 1854744 -248833110 + (TG)n Simple_repeat Simple_repeat 2 43 0 274 292 43 31 chr2 1857269 1857430 -248830424 - L1ME LINE L1 -312 5858 5696 227 272 124 50 chr2 1857436 1857638 -248830216 - LTR41 LTR ERVL -15 758 542 268 259 28 85 chr2 1857818 1858030 -248829824 - LTR41 LTR ERVL -573 200 1 307 303 18 9 chr2 1858073 1858182 -248829672 - L1ME LINE L1 -513 5651 5542 301 280 30 0 chr2 1858184 1858316 -248829538 - L1ME LINE L1 -708 5454 5319 596 254 154 50 chr2 1858351 1859125 -248828729 - L1ME LINE L1 -816 5330 4477 910 293 99 3 chr2 1859284 1859636 -248828218 + LTR53 LTR ERVL 1 386 -133 1304 204 17 3 chr2 1859647 1859941 -248827913 - L1P LINE L1 -964 5182 4885 180 26 53 26 chr2 1859947 1859985 -248827869 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1468 186 21 77 chr2 1860226 1860656 -248827198 + LTR52 LTR ERVL 13 418 -3 681 254 115 21 chr2 1860660 1860991 -248826863 - L1M4 LINE L1 -551 5633 5272 * 1081 222 50 81 chr2 1860972 1861372 -248826482 - L1M4 LINE L1 -789 5357 4973 1888 191 5 0 chr2 1861372 1861750 -248826104 - L1MB2 LINE L1 -2 6169 5790 1081 222 50 81 chr2 1861750 1861844 -248826010 - L1M4 LINE L1 -1173 4973 4878 350 273 7 56 chr2 1863061 1863204 -248824650 - L2 LINE L2 -203 3069 2934 225 397 94 21 chr2 1863247 1863481 -248824373 - L2 LINE L2 -459 2855 2605 227 287 66 37 chr2 1864116 1864252 -248823602 + MIR SINE MIR 122 261 -1 219 232 0 0 chr2 1864742 1864798 -248823056 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 1983 153 0 0 chr2 1865508 1865803 -248822051 - AluSx SINE Alu -15 297 3 380 273 105 14 chr2 1866931 1867074 -248820780 - L2 LINE L2 0 3313 3158 198 0 0 0 chr2 1867179 1867201 -248820653 + (TG)n Simple_repeat Simple_repeat 1 22 0 784 297 20 28 chr2 1867324 1867573 -248820281 - MIR SINE MIR -4 258 12 223 337 18 49 chr2 1868139 1868302 -248819552 + L2 LINE L2 2933 3090 -182 202 140 20 20 chr2 1868931 1868981 -248818873 + (TA)n Simple_repeat Simple_repeat 2 51 0 353 281 50 50 chr2 1868993 1869192 -248818662 - L1ME LINE L1 -360 5761 5563 22 88 0 0 chr2 1871567 1871624 -248816230 + AT_rich Low_complexity Low_complexity 1 57 0 330 253 53 67 chr2 1872375 1872676 -248815178 + L1MDa LINE L1 1324 1660 -5061 270 0 0 0 chr2 1872729 1872759 -248815095 + (CA)n Simple_repeat Simple_repeat 2 31 0 457 312 80 0 chr2 1873657 1873907 -248813947 + L1M4 LINE L1 1344 1613 -5246 889 247 91 51 chr2 1873930 1874359 -248813495 + L1M4 LINE L1 5633 6078 -879 821 205 12 89 chr2 1874382 1874640 -248813214 - LTR12 LTR ERV1 -239 475 238 7972 184 68 30 chr2 1875451 1877142 -248810712 + MER52A LTR ERV1 1 1755 0 207 200 0 0 chr2 1878164 1878204 -248809650 + MIR SINE MIR 185 224 -38 261 75 0 0 chr2 1878205 1878245 -248809609 + (GA)n Simple_repeat Simple_repeat 2 41 0 2325 100 3 0 chr2 1878421 1878721 -248809133 - AluSq SINE Alu -12 301 1 1755 211 0 0 chr2 1878951 1879302 -248808552 + L1P LINE L1 4410 4760 -1386 871 178 77 6 chr2 1879307 1879476 -248808378 - MLT1B LTR MaLR -202 188 8 275 274 264 0 chr2 1879566 1879672 -248808182 + L2 LINE L2 3180 3313 0 253 226 39 29 chr2 1880658 1880760 -248807094 + (CA)n Simple_repeat Simple_repeat 2 104 0 292 207 33 20 chr2 1880772 1880922 -248806932 + (CA)n Simple_repeat Simple_repeat 1 152 0 342 312 11 58 chr2 1880976 1881165 -248806689 + (CACG)n Simple_repeat Simple_repeat 1 180 0 * 442 261 6 30 chr2 1881045 1881210 -248806644 + (CA)n Simple_repeat Simple_repeat 1 161 0 319 333 0 0 chr2 1882615 1882723 -248805131 - MIR3 SINE MIR -8 200 93 235 185 15 31 chr2 1882872 1882937 -248804917 - MLT1E1 LTR MaLR -440 214 151 506 71 12 60 chr2 1882946 1883030 -248804824 - MADE1 DNA Mariner 0 80 1 378 61 0 0 chr2 1883148 1883197 -248804657 + (CA)n Simple_repeat Simple_repeat 2 50 0 403 333 15 0 chr2 1883569 1883701 -248804153 + L2 LINE L2 3136 3269 -3 584 327 118 34 chr2 1883842 1884208 -248803646 - L1MEc LINE L1 -4212 2184 1759 2242 92 0 0 chr2 1884208 1884492 -248803362 - AluSx SINE Alu -28 284 1 584 327 118 34 chr2 1884492 1884651 -248803203 - L1MEc LINE L1 -4637 1759 1615 196 393 25 16 chr2 1884924 1885046 -248802808 + MIR SINE MIR 76 198 -64 21 0 0 0 chr2 1886181 1886202 -248801652 + AT_rich Low_complexity Low_complexity 1 21 0 702 222 28 113 chr2 1886289 1886609 -248801245 + MLT1C LTR MaLR 34 326 -141 348 297 135 15 chr2 1886875 1887141 -248800713 - HAL1b LINE L1 -21 1327 1030 391 276 173 28 chr2 1887166 1887420 -248800434 - HAL1b LINE L1 -523 825 535 475 254 56 0 chr2 1887488 1887630 -248800224 - HAL1b LINE L1 -717 631 482 254 329 0 0 chr2 1887736 1887812 -248800042 + CT-rich Low_complexity Low_complexity 3 78 0 1347 238 16 53 chr2 1888041 1888378 -248799476 + MLT2D LTR ERVL 50 373 -41 330 26 0 0 chr2 1888378 1888417 -248799437 + (CA)n Simple_repeat Simple_repeat 2 40 0 1347 238 16 53 chr2 1888417 1888458 -248799396 + MLT2D LTR ERVL 373 414 0 272 325 40 32 chr2 1889964 1890090 -248797764 + MIR SINE MIR 100 226 -36 1696 200 74 32 chr2 1890108 1890488 -248797366 - MSTD LTR MaLR 0 396 1 1795 186 61 0 chr2 1890493 1890853 -248797001 + MSTC LTR MaLR 4 385 -43 1882 224 41 5 chr2 1890853 1891264 -248796590 - MSTB LTR MaLR 0 426 1 2284 199 68 11 chr2 1891272 1891744 -248796110 - MSTB-int LTR MaLR -15 1636 1138 11254 25 0 6 chr2 1891855 1894076 -248793778 + L1HS LINE L1 3951 6155 0 335 257 0 27 chr2 1894074 1894222 -248793632 + L1MC3 LINE L1 3252 3395 -2751 * 821 237 60 73 chr2 1894208 1894605 -248793249 + L1MC3 LINE L1 4877 5268 -878 3646 199 12 4 chr2 1894605 1895328 -248792526 + Tigger2 DNA MER2_type 1 729 -1989 1113 170 122 0 chr2 1895368 1895598 -248792256 + Tigger2 DNA MER2_type 2461 2718 0 9649 205 50 22 chr2 1895602 1896906 -248790948 + L1MC3 LINE L1 5271 6675 -1110 402 21 0 0 chr2 1896906 1896953 -248790901 + (TG)n Simple_repeat Simple_repeat 2 48 0 9649 205 50 22 chr2 1896953 1898080 -248789774 + L1MC3 LINE L1 6675 7769 -16 272 237 237 9 chr2 1898162 1898276 -248789578 + MIR SINE MIR 113 252 -10 253 215 152 0 chr2 1898279 1898358 -248789496 + MARNA DNA Mariner 133 223 -363 22 70 0 0 chr2 1898410 1898453 -248789401 + AT_rich Low_complexity Low_complexity 1 43 0 378 338 77 30 chr2 1898550 1898784 -248789070 + MIR SINE MIR 18 262 0 28 48 0 0 chr2 1898817 1898859 -248788995 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 1898979 1899003 -248788851 + AT_rich Low_complexity Low_complexity 1 24 0 219 88 0 0 chr2 1899859 1899893 -248787961 + (GA)n Simple_repeat Simple_repeat 1 34 0 30 0 0 0 chr2 1900477 1900507 -248787347 + AT_rich Low_complexity Low_complexity 1 30 0 1928 147 0 3 chr2 1901767 1902052 -248785802 + AluSx SINE Alu 1 284 -28 2933 202 37 7 chr2 1902192 1902787 -248785067 - MSTB-int LTR MaLR -1038 613 1 2124 181 43 17 chr2 1902787 1903202 -248784652 - MSTB LTR MaLR 0 426 1 328 71 0 0 chr2 1903202 1903244 -248784610 + MSTC LTR MaLR 381 422 -6 1551 167 30 79 chr2 1903267 1903406 -248784448 + MLT2A2 LTR ERVL 52 196 -358 2449 70 0 6 chr2 1903406 1903719 -248784135 + AluY SINE Alu 1 311 0 1551 167 30 79 chr2 1903719 1904091 -248783763 + MLT2A2 LTR ERVL 196 554 0 333 0 0 0 chr2 1906571 1906608 -248781246 + (TC)n Simple_repeat Simple_repeat 2 38 0 647 258 75 0 chr2 1906827 1907013 -248780841 + MER63A DNA MER1_type 3 202 -8 30 0 0 0 chr2 1907733 1907763 -248780091 + AT_rich Low_complexity Low_complexity 1 30 0 258 224 0 0 chr2 1908073 1908158 -248779696 + CT-rich Low_complexity Low_complexity 1 85 0 283 289 52 82 chr2 1908977 1909112 -248778742 - MIR SINE MIR -13 249 119 21 57 0 0 chr2 1909241 1909276 -248778578 + AT_rich Low_complexity Low_complexity 1 35 0 2276 123 0 0 chr2 1909681 1909989 -248777865 + AluSg SINE Alu 1 308 -2 226 220 147 37 chr2 1910079 1910188 -248777666 + MIR SINE MIR 107 227 -35 2064 127 0 3 chr2 1910936 1911236 -248776618 - AluSq SINE Alu 0 313 15 207 0 0 0 chr2 1911239 1911262 -248776592 + (T)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr2 1913596 1913623 -248774231 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 505 275 50 84 chr2 1913871 1914489 -248773365 - HAL1 LINE L1 -886 1621 1025 21 36 0 0 chr2 1914535 1914563 -248773291 + AT_rich Low_complexity Low_complexity 1 28 0 236 53 26 0 chr2 1915173 1915211 -248772643 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2049 70 0 77 chr2 1915214 1915514 -248772340 - AluY SINE Alu -34 277 1 2049 136 13 0 chr2 1915809 1916111 -248771743 + AluSx SINE Alu 3 308 -4 180 125 0 0 chr2 1916731 1916763 -248771091 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 280 25 68 chr2 1916795 1916913 -248770941 - L2 LINE L2 -4 3309 3197 430 322 37 28 chr2 1918512 1918726 -248769128 - MIR SINE MIR -24 238 23 341 146 0 0 chr2 1919929 1919984 -248767870 + L1P5 LINE L1 5391 5445 -709 3451 55 2 0 chr2 1919993 1920427 -248767427 + L1PA5 LINE L1 5718 6152 -2 3334 188 120 5 chr2 1920438 1921206 -248766648 + L1MA8 LINE L1 5428 6283 -8 370 305 18 24 chr2 1921964 1922128 -248765726 - L1MD3 LINE L1 -5 7990 7828 330 67 317 0 chr2 1922767 1922827 -248765027 + MADE1 DNA Mariner 1 79 -1 181 278 0 0 chr2 1923402 1923438 -248764416 - L2 LINE L2 -16 3256 3221 432 248 58 7 chr2 1923520 1923657 -248764197 + L1M4 LINE L1 2436 2579 -3567 306 273 88 68 chr2 1924186 1924585 -248763269 + HAL1b LINE L1 68 474 -874 * 1846 284 89 30 chr2 1924582 1926106 -248761748 - L1MDa LINE L1 -1587 4819 3175 * 6099 218 37 14 chr2 1926102 1928158 -248759696 + L1MA4 LINE L1 4 2131 -4197 3445 83 0 0 chr2 1928158 1928602 -248759252 + MLT2A1 LTR ERVL 1 444 0 6099 218 37 14 chr2 1928602 1929244 -248758610 + L1MA4 LINE L1 2131 2756 -3572 5550 183 28 50 chr2 1929237 1930103 -248757751 + L1MA4 LINE L1 4061 4945 -1537 * 1949 117 25 3 chr2 1930103 1930463 -248757391 + AluSc SINE Alu 1 309 0 5550 183 28 50 chr2 1930463 1932018 -248755836 + L1MA4 LINE L1 4945 6425 -57 2281 87 0 3 chr2 1932018 1932305 -248755549 + AluY SINE Alu 3 288 -23 5550 183 28 50 chr2 1932305 1932356 -248755498 + L1MA4 LINE L1 6425 6476 -6 1231 266 85 23 chr2 1932391 1933053 -248754801 - L1MDa LINE L1 -3231 3175 2473 545 254 76 61 chr2 1933077 1933655 -248754199 - L1MDa LINE L1 -3984 2422 1836 307 214 0 95 chr2 1933661 1933787 -248754067 - L1MDa LINE L1 -4935 1471 1358 2084 74 0 0 chr2 1933787 1934057 -248753797 - L1PA6 LINE L1 0 6154 5885 502 308 44 54 chr2 1934094 1934591 -248753263 - L1MDa LINE L1 -5142 1267 776 2233 91 7 10 chr2 1936209 1936518 -248751336 - AluY SINE Alu -3 308 1 1390 210 35 11 chr2 1936523 1936809 -248751045 - AluJo SINE Alu -19 293 1 3923 262 64 48 chr2 1938593 1939483 -248748371 + L1MEc LINE L1 2078 2952 -3263 261 0 0 0 chr2 1939483 1939512 -248748342 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3923 262 64 48 chr2 1939512 1940845 -248747009 + L1MEc LINE L1 2952 4287 -1928 2335 278 55 43 chr2 1941207 1941321 -248746533 + L1MCb LINE L1 3 114 -5931 1528 166 50 68 chr2 1941321 1941701 -248746153 - THE1C LTR MaLR 0 375 3 2335 278 55 43 chr2 1941701 1942622 -248745232 + L1MCb LINE L1 114 1050 -4995 581 281 64 54 chr2 1942648 1943117 -248744737 + MER77 LTR ERV1 53 603 -2 271 190 25 25 chr2 1943284 1943363 -248744491 + L1MCb LINE L1 1057 1135 -5429 627 41 0 31 chr2 1943426 1943524 -248744330 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 2371 249 34 35 chr2 1943549 1944638 -248743216 + L1MCb LINE L1 2384 3471 -3093 2487 42 3 10 chr2 1944638 1944945 -248742909 - AluY SINE Alu -6 305 1 2371 249 34 35 chr2 1944945 1945167 -248742687 + L1MCb LINE L1 3471 3692 -2872 31556 36 34 2 chr2 1945180 1949097 -248738757 + L1P LINE L1 1 4044 -2102 1986 116 20 10 chr2 1949197 1949490 -248738364 - AluSq SINE Alu -17 296 1 269 282 14 0 chr2 1949633 1949704 -248738150 + MIR SINE MIR 126 197 -65 329 202 23 132 chr2 1950668 1950797 -248737057 - MER5B DNA MER1_type -58 120 6 23 0 0 0 chr2 1953265 1953288 -248734566 + AT_rich Low_complexity Low_complexity 1 23 0 32 0 0 0 chr2 1953586 1953618 -248734236 + AT_rich Low_complexity Low_complexity 1 32 0 276 30 0 0 chr2 1953730 1953763 -248734091 + (TG)n Simple_repeat Simple_repeat 2 34 0 1242 218 72 50 chr2 1953802 1954164 -248733690 - MLT1A2 LTR MaLR -1 373 4 497 328 134 22 chr2 1954594 1954627 -248733227 - MLT1I LTR MaLR -2 407 379 1944 219 72 9 chr2 1954627 1955071 -248732783 - MER70A LTR ERVL 0 472 1 497 328 134 22 chr2 1955071 1955403 -248732451 - MLT1I LTR MaLR -30 379 1 453 323 111 49 chr2 1956686 1957073 -248730781 + L2 LINE L2 2504 2914 -400 367 315 49 27 chr2 1957153 1957337 -248730517 + L2 LINE L2 3122 3309 -4 23 0 0 0 chr2 1957826 1957849 -248730005 + AT_rich Low_complexity Low_complexity 1 23 0 289 322 21 10 chr2 1959216 1959318 -248728536 - MIR SINE MIR -66 142 40 189 242 145 0 chr2 1959445 1959507 -248728347 - MIR SINE MIR -105 103 33 2171 131 34 25 chr2 1959719 1960077 -248727777 - THE1B LTR MaLR -3 361 1 32 86 0 0 chr2 1960254 1960335 -248727519 + AT_rich Low_complexity Low_complexity 1 81 0 273 279 90 33 chr2 1961318 1961440 -248726414 - L2 LINE L2 -467 2847 2719 550 257 28 19 chr2 1961496 1961710 -248726144 - L1ME3 LINE L1 -2 6160 5945 339 247 12 0 chr2 1961725 1961806 -248726048 - L1ME3 LINE L1 -285 5885 5804 270 381 124 22 chr2 1961843 1962213 -248725641 - L2 LINE L2 -609 2705 2298 2893 59 0 5 chr2 1962744 1963133 -248724721 + L1PA7 LINE L1 5743 6129 -25 495 262 84 42 chr2 1963686 1963877 -248723977 - MLT1J2 LTR MaLR -251 199 1 315 0 0 0 chr2 1964236 1964271 -248723583 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 133 44 0 chr2 1964325 1964370 -248723484 + CT-rich Low_complexity Low_complexity 2 48 0 2367 83 6 0 chr2 1965960 1966285 -248721569 + L1PA8 LINE L1 5843 6169 -3 2390 80 0 3 chr2 1966759 1967059 -248720795 + AluSc SINE Alu 1 299 -10 185 358 37 0 chr2 1968833 1968914 -248718940 + MIR SINE MIR 60 143 -119 474 163 0 0 chr2 1970008 1970100 -248717754 - MER53 DNA DNA -2 187 96 1809 239 38 50 chr2 1970212 1971119 -248716735 - L1M4 LINE L1 -2497 3649 2754 262 224 31 31 chr2 1971382 1971543 -248716311 + (TA)n Simple_repeat Simple_repeat 2 162 0 420 136 0 0 chr2 1972209 1972268 -248715586 - AluS SINE Alu -237 72 14 1822 175 14 0 chr2 1973043 1973340 -248714514 - AluJo SINE Alu -10 302 2 2636 20 0 3 chr2 1973975 1974274 -248713580 - AluY SINE Alu -13 298 1 285 51 0 0 chr2 1974543 1974582 -248713272 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 309 309 94 69 chr2 1974638 1975042 -248712812 + HAL1 LINE L1 770 1183 -1324 998 223 36 43 chr2 1975042 1975347 -248712507 + MLT1C LTR MaLR 1 303 -164 244 215 114 0 chr2 1975469 1975548 -248712306 + HAL1 LINE L1 1198 1285 -1222 403 253 114 6 chr2 1976683 1976841 -248711013 + MLT1J2 LTR MaLR 8 182 -268 345 238 30 40 chr2 1976840 1976941 -248710913 + MLT1J1 LTR MaLR 202 301 -145 * 329 236 46 78 chr2 1978998 1979201 -248708653 + MIR SINE MIR 44 247 -15 653 250 56 12 chr2 1979692 1980014 -248707840 - MSTD LTR MaLR -14 382 1 21 0 0 0 chr2 1980186 1980207 -248707647 + AT_rich Low_complexity Low_complexity 1 21 0 2172 85 0 11 chr2 1980735 1981017 -248706837 + AluSg SINE Alu 1 279 -31 565 100 0 0 chr2 1981481 1981561 -248706293 + MADE1 DNA Mariner 1 80 0 403 296 72 34 chr2 1981867 1982131 -248705723 + L2 LINE L2 737 1010 -2304 685 250 6 33 chr2 1982154 1982334 -248705520 - FAM SINE Alu 0 175 1 1048 329 68 68 chr2 1982342 1983355 -248704499 + L2 LINE L2 1747 2759 -555 240 377 32 13 chr2 1983955 1984109 -248703745 + L2 LINE L2 2797 2953 -361 21 0 0 0 chr2 1984109 1984130 -248703724 + AT_rich Low_complexity Low_complexity 1 21 0 325 153 14 56 chr2 1984267 1984339 -248703515 - MLT1G LTR MaLR -306 284 216 791 308 42 39 chr2 1984727 1985087 -248702767 - L2 LINE L2 -536 2778 2418 365 326 8 8 chr2 1985266 1985395 -248702459 + MER58A DNA MER1_type 4 132 0 238 267 33 0 chr2 1985404 1985464 -248702390 + MER58A DNA MER1_type 163 224 0 233 229 37 83 chr2 1986762 1986871 -248700983 + MLT1D LTR MaLR 6 109 -517 596 269 88 4 chr2 1986907 1987145 -248700709 + MLT1D LTR MaLR 180 437 -68 4385 237 36 23 chr2 1988143 1988232 -248699622 - Charlie1a DNA MER1_type -1319 1442 1356 2042 156 27 16 chr2 1988232 1988603 -248699251 - THE1C LTR MaLR 0 375 1 9264 134 30 41 chr2 1988603 1990198 -248697656 - THE1C-int LTR MaLR 0 1580 3 1382 201 88 28 chr2 1990200 1990554 -248697300 - THE1C LTR MaLR 0 375 1 4385 237 36 23 chr2 1990554 1991871 -248695983 - Charlie1a DNA MER1_type -1405 1356 13 264 204 32 65 chr2 1993850 1993943 -248693911 - MLT1J LTR MaLR -379 132 43 305 330 82 21 chr2 1994374 1994607 -248693247 + L1MEd LINE L1 563 809 -5310 191 259 0 12 chr2 1994730 1994811 -248693043 + (TA)n Simple_repeat Simple_repeat 1 80 0 342 246 54 42 chr2 1994871 1995038 -248692816 + L1MEd LINE L1 1014 1182 -4937 8386 29 0 0 chr2 1995235 1996268 -248691586 - L1PA3 LINE L1 -1236 4910 3878 7707 19 2 0 chr2 1996268 1997546 -248690308 + L1PA3 LINE L1 4918 6197 0 2323 78 0 0 chr2 1997651 1997933 -248689921 + AluSx SINE Alu 1 282 -30 2010 279 68 44 chr2 1998576 1999257 -248688597 + L1ME1 LINE L1 43 767 -5629 2497 71 0 3 chr2 1999257 1999568 -248688286 + AluY SINE Alu 1 310 -1 2010 279 68 44 chr2 1999568 2000093 -248687761 + L1ME1 LINE L1 767 1278 -5118 1781 181 0 7 chr2 2000100 2000403 -248687451 - AluSx SINE Alu -11 301 1 288 0 0 0 chr2 2000524 2000556 -248687298 + (A)n Simple_repeat Simple_repeat 1 32 0 1314 277 133 20 chr2 2000556 2002233 -248685621 + L1ME1 LINE L1 1624 3426 -2789 900 237 111 45 chr2 2002221 2002268 -248685586 + L1ME1 LINE L1 4525 4567 -1648 * 222 118 0 0 chr2 2002268 2002302 -248685552 + (CA)n Simple_repeat Simple_repeat 1 34 0 900 237 111 45 chr2 2002302 2002769 -248685085 + L1ME1 LINE L1 4567 5073 -1142 905 158 0 0 chr2 2002773 2002906 -248684948 + AluSq/x SINE Alu 1 133 -179 1592 266 46 59 chr2 2003010 2004157 -248683697 + L1ME1 LINE L1 5109 6230 -5 1866 168 0 7 chr2 2004296 2004594 -248683260 + AluJb SINE Alu 1 296 -16 216 0 0 0 chr2 2004598 2004622 -248683232 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 490 277 94 24 chr2 2004978 2005269 -248682585 + L1ME3A LINE L1 5616 5922 -256 2167 135 0 0 chr2 2005351 2005648 -248682206 + AluSx SINE Alu 1 297 -15 2669 39 0 0 chr2 2005870 2006175 -248681679 + AluY SINE Alu 1 305 -6 1516 218 120 30 chr2 2006464 2006956 -248680898 - MER68 LTR ERV1 -4 558 23 259 282 57 16 chr2 2007783 2007907 -248679947 - L1ME4a LINE L1 -47 6074 5946 234 174 0 0 chr2 2007929 2007975 -248679879 + (TA)n Simple_repeat Simple_repeat 1 46 0 195 162 0 0 chr2 2009086 2009123 -248678731 + (TATG)n Simple_repeat Simple_repeat 4 40 0 184 250 115 0 chr2 2009543 2009595 -248678259 + L2 LINE L2 3117 3174 -98 188 336 75 15 chr2 2010099 2010233 -248677621 - MIR3 SINE MIR -35 173 32 2223 106 3 0 chr2 2010486 2010779 -248677075 + AluSq SINE Alu 1 294 -19 416 394 33 21 chr2 2011165 2011500 -248676354 + L3 LINE CR1 1084 1422 -155 23 33 0 0 chr2 2012080 2012110 -248675744 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr2 2012761 2012800 -248675054 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 2013411 2013449 -248674405 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 2013725 2013749 -248674105 + AT_rich Low_complexity Low_complexity 1 24 0 2327 118 8 30 chr2 2014415 2014787 -248673067 - THE1B LTR MaLR 0 364 1 11439 100 8 11 chr2 2014787 2016372 -248671482 - THE1B-int LTR MaLR 0 1580 1 2277 120 19 25 chr2 2016372 2016738 -248671116 - THE1B LTR MaLR 0 364 1 1436 221 24 3 chr2 2017329 2017659 -248670195 + MER2 DNA MER2_type 1 337 -8 557 301 92 15 chr2 2017770 2017976 -248669878 - MIR SINE MIR -27 235 14 307 375 97 21 chr2 2018763 2019051 -248668803 - L2 LINE L2 -1 3271 2962 2324 120 19 6 chr2 2019384 2019743 -248668111 - THE1B LTR MaLR 0 364 1 1497 190 47 0 chr2 2020427 2020701 -248667153 - AluJb SINE Alu -24 288 2 21 0 0 0 chr2 2020766 2020787 -248667067 + AT_rich Low_complexity Low_complexity 1 21 0 1718 172 6 21 chr2 2021119 2021451 -248666403 + MLT1A1 LTR MaLR 33 359 -6 243 61 0 0 chr2 2022558 2022591 -248665263 + (TG)n Simple_repeat Simple_repeat 2 34 0 353 250 11 11 chr2 2023703 2023795 -248664059 + L2 LINE L2 3221 3312 -1 12762 160 19 10 chr2 2024782 2027144 -248660710 + Tigger1 DNA MER2_type 26 2410 -8 254 26 53 0 chr2 2028478 2028516 -248659338 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 195 290 129 16 chr2 2030261 2030385 -248657469 + MIR SINE MIR 107 244 -18 383 169 0 0 chr2 2031389 2031466 -248656388 - L1PA15 LINE L1 -2 6163 6087 2906 155 21 6 chr2 2031468 2031990 -248655864 - L1PA15 LINE L1 -187 5978 5449 869 185 25 35 chr2 2032901 2033101 -248654753 + MER20 DNA MER1_type 1 198 -21 24 0 0 0 chr2 2033554 2033578 -248654276 + AT_rich Low_complexity Low_complexity 1 24 0 492 357 61 5 chr2 2034410 2034623 -248653231 + L2 LINE L2 2891 3115 -198 204 40 0 0 chr2 2034632 2034657 -248653197 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 1289 152 17 35 chr2 2034657 2034879 -248652975 - AluJo SINE Alu -29 283 64 395 266 105 0 chr2 2035137 2035280 -248652574 - MIR SINE MIR -13 249 92 306 0 0 0 chr2 2035595 2035629 -248652225 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 333 19 0 chr2 2035668 2035722 -248652132 + MER5A DNA MER1_type 72 126 -63 2371 235 34 14 chr2 2037299 2037954 -248649900 + Charlie1a DNA MER1_type 1 668 -787 827 181 84 34 chr2 2037973 2038210 -248649644 + Charlie1a DNA MER1_type 856 1104 -351 1523 179 94 21 chr2 2038774 2038890 -248648964 + L1MA9 LINE L1 5717 5823 -489 1708 213 29 79 chr2 2038890 2039473 -248648381 - MLT2B3 LTR ERVL 0 554 1 1523 179 94 21 chr2 2039473 2039820 -248648034 + L1MA9 LINE L1 5823 6312 0 845 174 0 0 chr2 2039913 2040045 -248647809 - FRAM SINE Alu -24 152 21 1644 172 97 3 chr2 2043145 2043453 -248644401 - MER1B DNA MER1_type 0 337 1 198 294 0 0 chr2 2044086 2044137 -248643717 - L2 LINE L2 0 3313 3263 1991 153 3 10 chr2 2044233 2044547 -248643307 + AluSx SINE Alu 1 312 0 555 327 104 78 chr2 2044575 2045993 -248641861 - L2 LINE L2 -220 3093 1636 814 302 66 13 chr2 2046531 2046836 -248641018 + LTR16A LTR ERVL 120 440 -10 1073 256 55 23 chr2 2046837 2047236 -248640618 + MLT1C LTR MaLR 1 412 -55 321 384 12 16 chr2 2047425 2047680 -248640174 + ERVL LTR ERVL 4744 4997 -767 1817 186 0 0 chr2 2048037 2048333 -248639521 + AluSx SINE Alu 1 296 -16 1983 141 14 39 chr2 2049023 2049385 -248638469 - L1PA16 LINE L1 -9 6157 5805 277 169 3 0 chr2 2049390 2049454 -248638400 + L1PA16 LINE L1 5752 5801 -365 27 0 0 0 chr2 2049884 2049911 -248637943 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 2050188 2050213 -248637641 + AT_rich Low_complexity Low_complexity 1 25 0 832 237 83 28 chr2 2050500 2050863 -248636991 - LTR52 LTR ERVL -37 384 2 1755 158 177 11 chr2 2051236 2051603 -248636251 - MSTA LTR MaLR 0 428 1 284 331 19 0 chr2 2051731 2051885 -248635969 + L1MEc LINE L1 101 257 -6139 1790 266 63 49 chr2 2052727 2053792 -248634062 + L1M4 LINE L1 4174 5253 -893 21 0 0 0 chr2 2055078 2055099 -248632755 + AT_rich Low_complexity Low_complexity 1 21 0 232 297 11 22 chr2 2055393 2055484 -248632370 + L1MEc LINE L1 112 201 -6195 297 323 39 32 chr2 2055543 2055822 -248632032 + L1ME2 LINE L1 5874 6154 -10 22 0 0 0 chr2 2056036 2056058 -248631796 + AT_rich Low_complexity Low_complexity 1 22 0 318 275 23 69 chr2 2056624 2056683 -248631171 - L1MB7 LINE L1 0 6184 6124 2893 151 40 31 chr2 2056683 2057205 -248630649 + MER1A DNA MER1_type 1 527 0 318 275 23 69 chr2 2057205 2057276 -248630578 - L1MB7 LINE L1 -60 6124 6060 1447 216 47 38 chr2 2057312 2057674 -248630180 - L1MB8 LINE L1 -99 6079 5711 1300 199 3 101 chr2 2057674 2058010 -248629844 + AluJo SINE Alu 1 303 -9 1447 216 47 38 chr2 2058010 2058092 -248629762 - L1MB8 LINE L1 -467 5711 5631 1714 254 65 15 chr2 2058092 2058752 -248629102 - L1M4 LINE L1 -3224 2922 2230 232 271 62 70 chr2 2059114 2059243 -248628611 + L2 LINE L2 3164 3291 -22 411 318 83 28 chr2 2059266 2059665 -248628189 + L1 LINE L1 4207 4627 -1519 21 57 0 0 chr2 2059693 2059728 -248628126 + AT_rich Low_complexity Low_complexity 1 35 0 440 235 20 0 chr2 2059926 2060024 -248627830 + MER46A DNA MER2_type 47 146 -90 * 990 199 57 64 chr2 2060022 2060318 -248627536 + MER2 DNA MER2_type 51 344 -1 209 184 0 0 chr2 2061225 2061263 -248626591 - MIR SINE MIR -168 94 57 201 270 63 3 chr2 2061266 2061348 -248626506 - MIR SINE MIR -64 144 81 536 276 0 17 chr2 2061676 2061857 -248625997 + (CA)n Simple_repeat Simple_repeat 1 178 0 273 364 33 54 chr2 2062153 2062337 -248625517 + L2 LINE L2 3075 3254 -18 303 335 80 17 chr2 2062379 2062555 -248625299 + MIR SINE MIR 49 235 -27 233 321 18 113 chr2 2064781 2064949 -248622905 + MIR SINE MIR 23 174 -88 22 0 0 0 chr2 2067624 2067646 -248620208 + AT_rich Low_complexity Low_complexity 1 22 0 450 109 75 9 chr2 2067991 2068338 -248619516 + (TA)n Simple_repeat Simple_repeat 1 370 0 27 73 0 0 chr2 2068417 2068472 -248619382 + AT_rich Low_complexity Low_complexity 1 55 0 192 77 0 0 chr2 2068475 2068501 -248619353 + (CATA)n Simple_repeat Simple_repeat 2 27 0 268 304 96 64 chr2 2069679 2069804 -248618050 + MIR3 SINE MIR 6 134 -74 278 294 22 44 chr2 2069806 2069942 -248617912 + MER94 DNA DNA 1 133 -1 242 194 16 0 chr2 2070378 2070440 -248617414 + GA-rich Low_complexity Low_complexity 4 66 0 279 324 72 9 chr2 2070645 2070756 -248617098 + L2 LINE L2 3195 3312 -1 1572 133 8 0 chr2 2071204 2071452 -248616402 + L1PA13 LINE L1 5905 6154 -9 420 301 20 14 chr2 2071515 2071661 -248616193 - MIR SINE MIR 0 262 116 200 114 68 0 chr2 2073614 2073658 -248614196 + T-rich Low_complexity Low_complexity 1 47 0 236 97 65 0 chr2 2074333 2074395 -248613459 + (TA)n Simple_repeat Simple_repeat 1 66 0 207 381 114 11 chr2 2077578 2077754 -248610100 - L2 LINE L2 -433 2881 2688 25 0 0 0 chr2 2078137 2078162 -248609692 + AT_rich Low_complexity Low_complexity 1 25 0 396 40 0 0 chr2 2078521 2078571 -248609283 + (CA)n Simple_repeat Simple_repeat 1 50 0 218 384 0 0 chr2 2079600 2079699 -248608155 + (CA)n Simple_repeat Simple_repeat 2 100 0 308 304 0 22 chr2 2079716 2079808 -248608046 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr2 2080175 2080203 -248607651 + AT_rich Low_complexity Low_complexity 1 28 0 223 163 41 0 chr2 2081623 2081672 -248606182 + A-rich Low_complexity Low_complexity 3 53 0 483 302 148 0 chr2 2081686 2081888 -248605966 - MIR SINE MIR -27 235 4 404 296 99 28 chr2 2082058 2082271 -248605583 + MIR SINE MIR 32 259 -3 1759 214 84 15 chr2 2082993 2083447 -248604407 - MER66B LTR ERV1 -1 485 1 873 67 0 8 chr2 2083553 2083673 -248604181 + L1PB1 LINE L1 6030 6148 -3 1342 187 45 11 chr2 2085090 2085443 -248602411 + MER50 LTR ERV1 94 458 -276 3033 168 96 30 chr2 2085443 2086596 -248601258 + pTR5 LTR ERV1 35 455 -259 1041 177 112 0 chr2 2086596 2086828 -248601026 + MER50 LTR ERV1 453 710 -24 22 35 0 0 chr2 2087173 2087202 -248600652 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 2088598 2088636 -248599218 + AT_rich Low_complexity Low_complexity 1 38 0 360 343 42 0 chr2 2088670 2088813 -248599041 + L1MC4 LINE L1 6768 6916 -1126 257 250 43 9 chr2 2088827 2088943 -248598911 + L1ME3A LINE L1 5993 6112 -58 369 0 0 0 chr2 2088961 2089002 -248598852 + (TG)n Simple_repeat Simple_repeat 2 42 0 349 238 131 52 chr2 2089059 2089311 -248598543 + L1MC4 LINE L1 6958 7229 -813 558 266 94 11 chr2 2089879 2090154 -248597700 + AluSx SINE Alu 5 302 0 1006 168 0 0 chr2 2090661 2090816 -248597038 - AluSg/x SINE Alu -3 307 153 2238 92 0 14 chr2 2091386 2091681 -248596173 + AluY SINE Alu 1 291 -20 1200 215 63 26 chr2 2092484 2092833 -248595021 + MLT1A1 LTR MaLR 1 362 -3 187 200 0 80 chr2 2093765 2093815 -248594039 + L3 LINE CR1 1188 1233 -344 322 285 45 63 chr2 2094552 2094807 -248593047 - MIR SINE MIR -13 249 1 923 140 6 0 chr2 2095428 2095599 -248592255 + (TG)n Simple_repeat Simple_repeat 2 173 0 1561 189 28 7 chr2 2095882 2096168 -248591686 + AluSx SINE Alu 1 292 -20 194 274 105 32 chr2 2096518 2096613 -248591241 + MIR SINE MIR 116 217 -45 206 235 0 44 chr2 2096726 2096794 -248591060 + GA-rich Low_complexity Low_complexity 4 68 0 263 299 90 68 chr2 2097287 2097464 -248590390 + MIR SINE MIR 22 202 -60 1645 161 84 0 chr2 2097560 2097846 -248590008 + AluSx SINE Alu 1 310 -2 573 248 183 43 chr2 2098071 2098486 -248589368 + L1MC4a LINE L1 7026 7498 -310 610 83 0 0 chr2 2098502 2098586 -248589268 + AluY SINE Alu 214 297 -14 22 94 0 0 chr2 2098786 2098850 -248589004 + AT_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 2098966 2098996 -248588858 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 2099247 2099292 -248588562 + AT_rich Low_complexity Low_complexity 1 45 0 1767 226 11 8 chr2 2099480 2099842 -248588012 - MLT1A1 LTR MaLR -2 363 1 195 286 67 84 chr2 2100084 2100203 -248587651 - L2 LINE L2 -1724 1590 1474 29 47 0 0 chr2 2100413 2100456 -248587398 + AT_rich Low_complexity Low_complexity 1 43 0 272 267 0 0 chr2 2100542 2100602 -248587252 + MSTC LTR MaLR 49 108 -320 274 317 10 0 chr2 2101863 2101964 -248585890 + MLT1J LTR MaLR 77 178 -333 1359 162 35 4 chr2 2102634 2102862 -248584992 + AluSg/x SINE Alu 73 307 -5 2334 85 7 0 chr2 2102940 2103234 -248584620 + AluSc SINE Alu 1 296 -13 1965 121 17 17 chr2 2103746 2104035 -248583819 + AluSx SINE Alu 1 289 -23 358 115 16 0 chr2 2104038 2104099 -248583755 - L1MB4 LINE L1 -28 6152 6091 2151 120 13 0 chr2 2104551 2104859 -248582995 - AluSp SINE Alu -1 312 1 3384 238 87 26 chr2 2104978 2105267 -248582587 + MER45B DNA AcHobo 1 271 -1310 2251 173 14 42 chr2 2105267 2105701 -248582153 - MSTB LTR MaLR -4 422 1 3384 238 87 26 chr2 2105701 2106392 -248581462 + MER45B DNA AcHobo 271 1040 0 845 261 28 21 chr2 2106589 2106880 -248580974 - L1PB3 LINE L1 -2986 3160 2868 5646 206 103 4 chr2 2106880 2108243 -248579611 + L1PB3 LINE L1 3186 4683 -1463 2009 173 55 107 chr2 2108233 2108444 -248579410 + L1PB3 LINE L1 5567 5788 -366 * 261 0 0 0 chr2 2108444 2108473 -248579381 + (TG)n Simple_repeat Simple_repeat 2 30 0 2009 173 55 107 chr2 2108473 2108545 -248579309 + L1PB3 LINE L1 5788 5862 -292 273 29 0 0 chr2 2108545 2108579 -248579275 + (TG)n Simple_repeat Simple_repeat 1 34 0 2009 173 55 107 chr2 2108579 2108900 -248578954 + L1PB3 LINE L1 5862 6140 -14 240 35 0 0 chr2 2109751 2109780 -248578074 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2155 86 0 0 chr2 2109782 2110061 -248577793 - AluY SINE Alu -32 279 1 195 368 35 49 chr2 2112495 2112639 -248575215 - MIR3 SINE MIR -52 156 15 21 0 0 0 chr2 2113732 2113753 -248574101 + AT_rich Low_complexity Low_complexity 1 21 0 236 244 41 32 chr2 2114897 2115020 -248572834 + (TG)n Simple_repeat Simple_repeat 1 124 0 2067 132 6 6 chr2 2115135 2115446 -248572408 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 2115542 2115565 -248572289 + AT_rich Low_complexity Low_complexity 1 23 0 2090 180 78 24 chr2 2116549 2116961 -248570893 + Tigger2a DNA MER2_type 1 434 0 1456 196 43 51 chr2 2117172 2117565 -248570289 - MLT1B LTR MaLR 0 390 1 245 109 62 0 chr2 2117622 2117686 -248570168 + (TG)n Simple_repeat Simple_repeat 2 69 0 240 190 6 49 chr2 2117834 2117997 -248569857 + (TG)n Simple_repeat Simple_repeat 1 156 0 401 219 31 31 chr2 2118037 2118197 -248569657 + (TG)n Simple_repeat Simple_repeat 2 161 0 312 294 51 110 chr2 2118301 2118469 -248569385 + L2 LINE L2 2736 2886 -428 2240 116 0 22 chr2 2118469 2118788 -248569066 - AluSx SINE Alu 0 312 1 312 294 51 110 chr2 2118788 2118874 -248568980 + L2 LINE L2 2886 2975 -339 288 130 0 0 chr2 2119105 2119151 -248568703 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 186 150 50 25 chr2 2119281 2119321 -248568533 + L2 LINE L2 2425 2465 -849 363 235 23 68 chr2 2119328 2119460 -248568394 + MER5B DNA MER1_type 23 148 -30 1882 130 7 0 chr2 2119508 2119784 -248568070 + MER61A LTR ERV1 65 342 -1 563 213 5 109 chr2 2120751 2120962 -248566892 - MER53 DNA DNA 0 189 1 1951 121 21 0 chr2 2121730 2122010 -248565844 + AluSx SINE Alu 1 286 -26 261 88 0 53 chr2 2125032 2125089 -248562765 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 3279 191 14 35 chr2 2125214 2125354 -248562500 + MER4D LTR ERV1 217 358 -545 2712 100 14 0 chr2 2125354 2125704 -248562150 + THE1A LTR MaLR 1 355 0 3279 191 14 35 chr2 2125704 2126255 -248561599 + MER4D LTR ERV1 358 894 -9 4364 114 116 130 chr2 2126835 2128260 -248559594 - pTR5 LTR ERV1 0 2438 743 2574 154 18 0 chr2 2128644 2129040 -248558814 + MER57A LTR ERV1 1 403 0 342 273 27 18 chr2 2129090 2129200 -248558654 + MIR3 SINE MIR 89 199 -9 309 264 213 7 chr2 2129411 2129591 -248558263 - MIR SINE MIR -6 256 38 204 254 0 34 chr2 2131130 2131189 -248556665 + GA-rich Low_complexity Low_complexity 2 58 0 259 272 43 11 chr2 2131473 2131565 -248556289 - L1ME LINE L1 -439 5682 5588 220 222 19 0 chr2 2131822 2131876 -248555978 + (CA)n Simple_repeat Simple_repeat 1 55 0 1978 173 80 0 chr2 2131901 2132213 -248555641 - MER1B DNA MER1_type 0 337 1 4303 307 116 28 chr2 2133066 2133276 -248554578 - L2 LINE L2 -615 2699 2509 185 0 40 0 chr2 2133276 2133301 -248554553 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4303 307 116 28 chr2 2133301 2134941 -248552913 - L2 LINE L2 -805 2509 632 2307 100 0 0 chr2 2134941 2135241 -248552613 + AluSc SINE Alu 1 300 -9 4303 307 116 28 chr2 2135241 2135534 -248552320 - L2 LINE L2 -2682 632 366 1429 237 52 43 chr2 2135578 2135641 -248552213 - MLT1C LTR MaLR -3 464 403 711 170 0 0 chr2 2135641 2135747 -248552107 + U6 snRNA snRNA 1 106 -1 1429 237 52 43 chr2 2135747 2136143 -248551711 - MLT1C LTR MaLR -64 403 1 2358 138 13 16 chr2 2136482 2136858 -248550996 - THE1C LTR MaLR 0 375 1 196 227 23 0 chr2 2136929 2136973 -248550881 - L2 LINE L2 -81 3191 3147 336 225 67 11 chr2 2137358 2137447 -248550407 - MLT1C LTR MaLR 0 467 374 3001 96 0 10 chr2 2138804 2139212 -248548642 + MLT2A1 LTR ERVL 1 404 -40 186 273 64 36 chr2 2139342 2139452 -248548402 + L2 LINE L2 2179 2291 -1023 244 337 23 12 chr2 2139992 2140078 -248547776 - MER5B DNA MER1_type -80 98 12 3409 114 7 0 chr2 2140124 2140573 -248547281 - MLT2A2 LTR ERVL -1 452 1 365 85 0 0 chr2 2141298 2141345 -248546509 - Alu SINE Alu -252 47 1 2551 118 0 3 chr2 2141603 2141958 -248545896 - THE1B LTR MaLR 0 364 11 262 308 34 51 chr2 2142460 2142577 -248545277 - MIR SINE MIR -100 162 48 449 386 55 48 chr2 2145937 2146336 -248541518 + L2 LINE L2 2870 3271 -1 837 183 109 45 chr2 2146667 2146869 -248540985 + MSTD LTR MaLR 1 215 -181 500 223 0 0 chr2 2146912 2147006 -248540848 + MSTD LTR MaLR 303 396 0 190 268 26 72 chr2 2147700 2147853 -248540001 + L2 LINE L2 2279 2424 -890 811 213 12 0 chr2 2148747 2148907 -248538947 + FRAM SINE Alu 1 159 -17 31 0 0 0 chr2 2149090 2149121 -248538733 + AT_rich Low_complexity Low_complexity 1 31 0 271 299 0 0 chr2 2149303 2149380 -248538474 + L1ME1 LINE L1 4522 4598 -1548 * 2744 261 31 27 chr2 2149376 2150731 -248537123 + L1ME1 LINE L1 4801 6162 -4 963 145 0 0 chr2 2150739 2150911 -248536943 + (TA)n Simple_repeat Simple_repeat 1 172 0 2049 151 53 34 chr2 2150935 2151292 -248536562 - THE1B LTR MaLR 0 364 1 5311 133 14 5 chr2 2351318 2352176 -248335678 + Tigger1 DNA MER2_type 1553 2418 0 195 237 0 0 chr2 2354129 2354167 -248333687 + L2 LINE L2 3211 3248 -24 272 250 13 26 chr2 2357421 2357497 -248330357 + MLT1J LTR MaLR 423 497 -14 2334 81 20 0 chr2 2362404 2362702 -248325152 - AluSq SINE Alu -9 304 1 207 0 50 50 chr2 2363241 2363281 -248324573 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 254 193 48 0 chr2 2363454 2363537 -248324317 + (CA)n Simple_repeat Simple_repeat 1 87 0 2699 58 0 0 chr2 2365045 2365356 -248322498 + AluY SINE Alu 1 311 0 263 292 23 29 chr2 2366225 2366396 -248321458 - L1ME4a LINE L1 -25 6096 5927 2155 115 16 3 chr2 2368144 2368448 -248319406 - AluSg SINE Alu -2 308 1 278 336 9 0 chr2 2371939 2372055 -248315799 + (CA)n Simple_repeat Simple_repeat 2 118 0 288 309 138 13 chr2 2372624 2372922 -248314932 + L2 LINE L2 2622 2956 -358 210 326 11 11 chr2 2373103 2373195 -248314659 + L2 LINE L2 3187 3278 -35 333 0 0 0 chr2 2374185 2374222 -248313632 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 157 41 41 chr2 2376275 2376447 -248311407 + (CA)n Simple_repeat Simple_repeat 1 172 0 387 131 38 46 chr2 2376548 2376796 -248311058 + (CA)n Simple_repeat Simple_repeat 1 245 0 194 157 22 52 chr2 2377072 2377206 -248310648 + (CA)n Simple_repeat Simple_repeat 2 131 0 308 133 54 24 chr2 2377267 2377433 -248310421 + (CA)n Simple_repeat Simple_repeat 2 172 0 252 351 55 20 chr2 2377542 2377744 -248310110 + L2 LINE L2 1834 2042 -1272 594 0 0 0 chr2 2379282 2379348 -248308506 + (TC)n Simple_repeat Simple_repeat 2 67 0 246 394 42 13 chr2 2388133 2388369 -248299485 + L1MC4a LINE L1 5385 5627 -2181 1573 92 29 103 chr2 2388381 2388730 -248299124 + L1PA8 LINE L1 3104 3426 -2720 8211 93 6 3 chr2 2388730 2390730 -248297124 + L1PA8 LINE L1 4164 6166 -6 2011 123 14 0 chr2 2390813 2391089 -248296765 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 2391089 2391112 -248296742 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 752 273 113 10 chr2 2391147 2391440 -248296414 + MER46C DNA MER2_type 1 323 -15 308 259 6 84 chr2 2391452 2391618 -248296236 + L1MC4a LINE L1 5713 5865 -1943 22 35 0 0 chr2 2391798 2391827 -248296027 + AT_rich Low_complexity Low_complexity 1 29 0 331 289 114 24 chr2 2392596 2392928 -248294926 + L1M4 LINE L1 2120 2481 -3665 1137 272 15 9 chr2 2393013 2393348 -248294506 - MER58B DNA MER1_type 0 341 5 562 304 39 5 chr2 2394383 2394587 -248293267 + Charlie8 DNA MER1_type 27 237 -2180 837 209 0 0 chr2 2395464 2395617 -248292237 - FRAM SINE Alu -12 164 12 229 262 159 37 chr2 2396540 2396647 -248291207 + MIR3 SINE MIR 39 158 -50 412 262 0 0 chr2 2399625 2399728 -248288126 + L1MB8 LINE L1 6076 6178 0 574 154 34 0 chr2 2400328 2400477 -248287377 + (TG)n Simple_repeat Simple_repeat 2 155 0 355 186 40 23 chr2 2400528 2400705 -248287149 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 177 37 0 chr2 2400749 2400913 -248286941 + (TG)n Simple_repeat Simple_repeat 2 171 0 275 184 29 10 chr2 2400936 2401039 -248286815 + (TG)n Simple_repeat Simple_repeat 2 106 0 539 172 44 0 chr2 2401062 2401409 -248286445 + (TG)n Simple_repeat Simple_repeat 1 362 0 1992 121 32 24 chr2 2402360 2402700 -248285154 + MER61A LTR ERV1 1 343 0 2251 97 3 0 chr2 2403920 2404210 -248283644 + AluSq SINE Alu 1 291 -22 1508 139 15 120 chr2 2404362 2404686 -248283168 + AluJb SINE Alu 1 290 -12 196 294 134 8 chr2 2407077 2407196 -248280658 - MIR3 SINE MIR -54 154 21 471 317 87 0 chr2 2409504 2409687 -248278167 + MER58B DNA MER1_type 92 290 -51 227 231 192 46 chr2 2410408 2410538 -248277316 + MIR SINE MIR 113 261 -1 2232 124 0 3 chr2 2410763 2411062 -248276792 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 2411911 2411934 -248275920 + (A)n Simple_repeat Simple_repeat 1 23 0 1119 72 0 0 chr2 2412225 2412377 -248275477 + L1PA8 LINE L1 6017 6168 -4 21 0 0 0 chr2 2412438 2412459 -248275395 + AT_rich Low_complexity Low_complexity 1 21 0 364 177 0 0 chr2 2415422 2415484 -248272370 + MLT1A2 LTR MaLR 4 65 -402 619 239 95 23 chr2 2417290 2417553 -248270301 + MER33 DNA MER1_type 43 324 0 527 233 47 31 chr2 2417689 2417882 -248269972 + L1ME LINE L1 815 1010 -5060 700 224 33 0 chr2 2418298 2418450 -248269404 + MER5A DNA MER1_type 33 189 0 234 307 24 87 chr2 2419785 2419912 -248267942 - MIR SINE MIR -57 151 33 240 271 0 57 chr2 2420374 2420444 -248267410 - MIR3 SINE MIR 0 208 143 2290 84 3 3 chr2 2420688 2420972 -248266882 + AluSq SINE Alu 1 284 -29 207 0 0 0 chr2 2420975 2420998 -248266856 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2334 111 0 0 chr2 2421315 2421622 -248266232 - AluSx SINE Alu -5 307 1 2006 106 0 4 chr2 2421885 2422150 -248265704 + AluSx SINE Alu 34 297 -15 1112 234 42 28 chr2 2422956 2423315 -248264539 + MLT1A1 LTR MaLR 2 365 0 1280 171 33 4 chr2 2423740 2423870 -248263984 - MER4A LTR ERV1 0 664 549 1949 91 12 4 chr2 2423870 2424161 -248263693 - AluSx SINE Alu 0 319 27 1280 171 33 4 chr2 2424161 2424278 -248263576 - MER4A LTR ERV1 -115 549 437 431 145 28 45 chr2 2425379 2425524 -248262330 - MER4A LTR ERV1 -203 461 261 601 141 0 10 chr2 2425524 2425623 -248262231 - MER4A LTR ERV1 -566 98 1 953 242 28 32 chr2 2430403 2430688 -248257166 + MLT1A2 LTR MaLR 62 345 -29 365 319 30 15 chr2 2430788 2430923 -248256931 - L1MC/D LINE L1 -2060 5748 5612 222 237 0 54 chr2 2431215 2431401 -248256453 + (CCA)n Simple_repeat Simple_repeat 2 177 0 410 214 0 33 chr2 2431437 2431619 -248256235 + (CCA)n Simple_repeat Simple_repeat 2 177 0 308 102 25 146 chr2 2431662 2432022 -248255832 + (CCCA)n Simple_repeat Simple_repeat 1 316 0 * 351 211 0 49 chr2 2431702 2432078 -248255776 + (CCA)n Simple_repeat Simple_repeat 1 357 0 345 194 0 54 chr2 2432193 2432379 -248255475 + (CCA)n Simple_repeat Simple_repeat 2 177 0 2347 88 3 3 chr2 2433446 2433743 -248254111 - AluSq SINE Alu -16 297 1 696 263 59 4 chr2 2435316 2435552 -248252302 - MER58 DNA MER1_type -2153 267 19 308 299 13 44 chr2 2436747 2436874 -248250980 + MIR SINE MIR 27 138 -124 2421 112 0 0 chr2 2436874 2437186 -248250668 + AluSx SINE Alu 1 312 0 308 299 13 44 chr2 2437186 2437256 -248250598 + MIR SINE MIR 138 209 -53 205 292 56 22 chr2 2437560 2437649 -248250205 - MIR3 SINE MIR -50 158 67 371 263 5 58 chr2 2438472 2438857 -248248997 + (CCAA)n Simple_repeat Simple_repeat 1 364 0 212 223 27 47 chr2 2438879 2439027 -248248827 + (CTACT)n Simple_repeat Simple_repeat 1 145 0 219 217 108 36 chr2 2439129 2439295 -248248559 + (CCCTA)n Simple_repeat Simple_repeat 1 178 0 365 102 17 0 chr2 2440535 2440594 -248247260 + (TG)n Simple_repeat Simple_repeat 1 60 0 715 201 5 9 chr2 2440596 2441152 -248246702 + GA-rich Low_complexity Low_complexity 1 554 0 255 169 46 15 chr2 2441181 2441246 -248246608 - MLT2D LTR ERVL -50 364 298 351 202 0 0 chr2 2441332 2441431 -248246423 + CT-rich Low_complexity Low_complexity 1 99 0 227 208 0 0 chr2 2441431 2441444 -248246410 + MLT2C2 LTR ERVL 408 420 -44 282 56 0 0 chr2 2441444 2441480 -248246374 + (CA)n Simple_repeat Simple_repeat 1 36 0 227 208 0 0 chr2 2441480 2441519 -248246335 + MLT2C2 LTR ERVL 419 460 -4 1216 220 11 11 chr2 2441631 2441917 -248245937 - MLT2D LTR ERVL -128 286 1 2121 46 85 0 chr2 2442274 2442557 -248245297 + AluY SINE Alu 1 305 0 297 295 101 22 chr2 2443130 2443269 -248244585 + MER105 DNA DNA 55 204 0 643 225 6 17 chr2 2443632 2443997 -248243857 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 806 209 3 15 chr2 2444020 2444434 -248243420 + (TGGA)n Simple_repeat Simple_repeat 1 408 0 3041 198 16 7 chr2 2445327 2446003 -248241851 - L1 LINE L1 -1242 4904 4223 7424 23 0 1 chr2 2446028 2447312 -248240542 + L1PA3 LINE L1 4873 6155 0 997 160 21 46 chr2 2447316 2447554 -248240300 - L1 LINE L1 -795 5351 5120 2029 148 3 10 chr2 2448652 2448957 -248238897 - AluJb SINE Alu -9 303 1 1402 275 100 29 chr2 2449140 2449689 -248238165 - MER82 DNA MER2_type -60 593 6 543 304 61 101 chr2 2450250 2450279 -248237575 + L1ME4a LINE L1 5589 5618 -503 1105 72 0 13 chr2 2450279 2450431 -248237423 + L1PB1 LINE L1 5995 6144 -7 543 304 61 101 chr2 2450431 2450944 -248236910 + L1ME4a LINE L1 5618 6109 -12 252 0 0 0 chr2 2451872 2451900 -248235954 + (CA)n Simple_repeat Simple_repeat 1 28 0 2710 261 124 55 chr2 2452735 2454177 -248233677 + L1MEc LINE L1 35 1628 -4768 2382 97 0 7 chr2 2454177 2454487 -248233367 + AluSx SINE Alu 1 308 -4 2710 261 124 55 chr2 2454487 2454846 -248233008 + L1MEc LINE L1 1628 1961 -4435 12052 136 60 17 chr2 2454846 2455306 -248232548 - Tigger1 DNA MER2_type -5 2413 1974 2283 121 0 0 chr2 2455306 2455611 -248232243 + AluSc SINE Alu 1 305 -4 12052 136 60 17 chr2 2455611 2457263 -248230591 - Tigger1 DNA MER2_type -444 1974 210 898 154 4 150 chr2 2457269 2457503 -248230351 + AluJo SINE Alu 13 212 -100 2335 98 3 0 chr2 2458258 2458554 -248229300 - AluSx SINE Alu -11 301 5 1933 143 10 3 chr2 2459272 2459566 -248228288 - AluSx SINE Alu -16 296 1 229 318 36 55 chr2 2461430 2461540 -248226314 + L2 LINE L2 3145 3252 -20 654 142 0 28 chr2 2464324 2464465 -248223389 + (GGA)n Simple_repeat Simple_repeat 1 137 0 218 382 0 0 chr2 2464486 2464651 -248223203 + G-rich Low_complexity Low_complexity 1 165 0 21 57 0 0 chr2 2464929 2464964 -248222890 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 2465228 2465249 -248222605 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 2465262 2465283 -248222571 + GC_rich Low_complexity Low_complexity 1 21 0 180 261 0 0 chr2 2465574 2465620 -248222234 - MIR SINE MIR -10 252 207 308 267 125 17 chr2 2466393 2466513 -248221341 - MLT1F1 LTR MaLR -264 303 171 607 299 95 79 chr2 2468721 2469406 -248218448 - MER21B LTR ERV1 -147 716 21 225 287 23 11 chr2 2469602 2469689 -248218165 + L2 LINE L2 2271 2358 -956 1005 207 50 1 chr2 2470879 2471121 -248216733 + MLT2C1 LTR ERVL 61 343 -54 195 250 0 0 chr2 2471121 2471205 -248216649 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 226 297 0 0 chr2 2471205 2471269 -248216585 + CT-rich Low_complexity Low_complexity 1 64 0 745 209 0 0 chr2 2473117 2473246 -248214608 + FLAM_C SINE Alu 1 129 -4 1844 179 74 60 chr2 2473493 2473928 -248213926 + MER41B LTR ERV1 105 384 -94 2377 95 3 0 chr2 2473928 2474222 -248213632 - AluSx SINE Alu -17 295 1 1844 179 74 60 chr2 2474222 2474310 -248213544 + MER41B LTR ERV1 384 469 -9 31 0 0 0 chr2 2474403 2474434 -248213420 + AT_rich Low_complexity Low_complexity 1 31 0 219 301 42 49 chr2 2474441 2474584 -248213270 - MIR SINE MIR -75 187 46 252 277 145 0 chr2 2475290 2475373 -248212481 + MIR SINE MIR 52 146 -62 198 282 214 8 chr2 2477014 2477131 -248210723 - MER5A DNA MER1_type -23 166 26 252 205 0 108 chr2 2477138 2477221 -248210633 - MER66A LTR ERV1 -13 465 392 2418 96 0 0 chr2 2477256 2477568 -248210286 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 2477612 2477633 -248210221 + AT_rich Low_complexity Low_complexity 1 21 0 2186 109 7 3 chr2 2477642 2477964 -248209890 + AluSq SINE Alu 1 313 0 322 262 91 9 chr2 2478809 2478923 -248208931 + MIR SINE MIR 30 151 -63 3338 170 25 47 chr2 2479584 2480369 -248207485 - pTR5 LTR ERV1 -730 1708 743 726 82 0 0 chr2 2480369 2480466 -248207388 - MER4B LTR ERV1 -96 514 418 39671 64 9 3 chr2 2480469 2486544 -248201310 + L1PA5 LINE L1 11 6124 -30 653 144 8 44 chr2 2486544 2486745 -248201109 - MER4A LTR ERV1 -173 593 264 521 146 31 10 chr2 2486748 2486844 -248201010 - MER4A LTR ERV1 -566 98 1 337 313 45 8 chr2 2486845 2486979 -248200875 + MLT1C LTR MaLR 43 181 -286 573 211 0 64 chr2 2487957 2488113 -248199741 + MER77 LTR ERV1 62 207 -398 228 261 35 78 chr2 2488333 2488448 -248199406 - MER5A DNA MER1_type 0 189 80 272 303 18 37 chr2 2488820 2488954 -248198900 - MIR SINE MIR -53 155 24 1750 176 0 29 chr2 2489070 2489376 -248198478 + AluJo SINE Alu 1 297 -15 2413 53 3 3 chr2 2489388 2489699 -248198155 + AluY SINE Alu 1 311 0 968 189 6 0 chr2 2489699 2489858 -248197996 + AluJo/FRAM SINE Alu 135 294 -18 721 247 52 51 chr2 2491808 2492210 -248195644 - MER67C LTR ERV1 -1 709 119 1037 134 21 5 chr2 2494380 2494566 -248193288 - MER65A LTR ERV1 -4 441 253 1584 216 71 0 chr2 2494568 2494933 -248192921 + MER57A LTR ERV1 3 393 -10 1254 188 4 16 chr2 2494950 2495206 -248192648 - MER65A LTR ERV1 -189 256 4 3435 131 15 71 chr2 2495485 2495835 -248192019 - MER41B LTR ERV1 0 635 340 756 188 0 0 chr2 2495835 2495968 -248191886 + FLAM_C SINE Alu 1 133 0 3435 131 15 71 chr2 2495968 2496290 -248191564 - MER41B LTR ERV1 -295 340 1 2368 110 0 0 chr2 2496594 2496894 -248190960 - AluSx SINE Alu -12 300 1 2146 117 3 0 chr2 2497118 2497408 -248190446 - AluSg SINE Alu -19 291 1 366 247 99 99 chr2 2497659 2497983 -248189871 - MER34C LTR ERV1 -3 582 259 639 261 0 6 chr2 2498071 2498228 -248189626 - MER34C LTR ERV1 -385 200 45 1480 176 53 7 chr2 2498397 2498681 -248189173 + MER57A LTR ERV1 107 403 0 258 250 33 58 chr2 2499135 2499255 -248188599 - LTR23 LTR ERV1 0 437 321 31 0 0 0 chr2 2499358 2499389 -248188465 + AT_rich Low_complexity Low_complexity 1 31 0 484 45 0 15 chr2 2499389 2499456 -248188398 - L1PA4 LINE L1 -3 6152 6087 403 52 0 0 chr2 2499456 2499514 -248188340 + L1PA2 LINE L1 5989 6046 -109 1235 199 77 3 chr2 2499515 2499827 -248188027 - LTR56 LTR ERV1 -110 335 1 383 206 178 9 chr2 2499827 2499933 -248187921 + MER34C LTR ERV1 115 238 -347 361 182 63 6 chr2 2499973 2500192 -248187662 + (CAG)n Simple_repeat Simple_repeat 1 231 0 311 172 63 29 chr2 2500326 2500500 -248187354 + (CAG)n Simple_repeat Simple_repeat 1 180 0 316 190 58 23 chr2 2500704 2500878 -248186976 + (CAG)n Simple_repeat Simple_repeat 1 180 0 383 254 66 104 chr2 2501385 2501672 -248186182 + MER34C LTR ERV1 310 585 0 186 350 60 0 chr2 2502246 2502346 -248185508 + MIR SINE MIR 59 164 -98 1318 240 122 22 chr2 2502353 2502651 -248185203 + MER39 LTR ERV1 1 268 -439 1565 263 142 12 chr2 2502651 2503221 -248184633 - LTR48B LTR ERV1 0 644 1 1318 240 122 22 chr2 2503221 2503513 -248184341 + MER39 LTR ERV1 268 691 -16 557 254 117 0 chr2 2503517 2503714 -248184140 - MER31A LTR ERV1 -249 236 17 2098 115 3 0 chr2 2503793 2504089 -248183765 - AluSx SINE Alu -13 299 3 1549 266 72 13 chr2 2504565 2505092 -248182762 + MER89 LTR ERV1 1 558 -1 439 83 0 0 chr2 2506816 2506876 -248180978 - MER4C LTR ERV1 0 465 406 5183 114 31 9 chr2 2506877 2507223 -248180631 + MER4E LTR ERV1 1 338 -441 1988 123 10 7 chr2 2507223 2507531 -248180323 + AluSg SINE Alu 1 309 -1 5183 114 31 9 chr2 2507531 2507946 -248179908 + MER4E LTR ERV1 338 779 0 368 306 78 29 chr2 2507965 2508250 -248179604 - L1ME4a LINE L1 -225 5896 5549 183 129 0 0 chr2 2510451 2510482 -248177372 + (TA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 2510709 2510734 -248177120 + AT_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr2 2511959 2511994 -248175860 + (TG)n Simple_repeat Simple_repeat 2 36 0 2316 103 0 0 chr2 2513088 2513400 -248174454 + AluSx SINE Alu 1 312 0 681 266 153 35 chr2 2516459 2516741 -248171113 + MER58B DNA MER1_type 27 341 0 1928 46 13 0 chr2 2517781 2518020 -248169834 - AluY SINE Alu -69 242 1 180 356 82 7 chr2 2519966 2520101 -248167753 + L3b LINE CR1 1291 1435 -148 2221 110 40 35 chr2 2520223 2520595 -248167259 + THE1C LTR MaLR 1 374 -1 242 340 43 0 chr2 2521148 2521242 -248166612 + MIR SINE MIR 86 183 -79 1024 113 69 13 chr2 2573214 2573373 -248114481 - AluSx SINE Alu -16 296 129 421 121 24 12 chr2 2573373 2573456 -248114398 + CT-rich Low_complexity Low_complexity 1 84 0 925 114 15 8 chr2 2573456 2573588 -248114266 - AluSx SINE Alu -180 133 1 1426 164 0 5 chr2 2575109 2575323 -248112531 + AluJb SINE Alu 2 214 -98 234 150 0 0 chr2 2575355 2575395 -248112459 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 725 145 5 43 chr2 2575395 2575581 -248112273 + GA-rich Low_complexity Low_complexity 2 180 0 641 130 0 68 chr2 2575553 2575745 -248112109 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 * 619 175 9 38 chr2 2575707 2575947 -248111907 + GA-rich Low_complexity Low_complexity 1 232 0 * 735 159 6 28 chr2 2576876 2577058 -248110796 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 341 308 67 51 chr2 2577058 2577311 -248110543 - L1MEd LINE L1 -4903 1216 960 1017 43 12 24 chr2 2577334 2577498 -248110356 + (TCTA)n Simple_repeat Simple_repeat 3 164 0 1173 154 13 44 chr2 2578106 2578333 -248109521 - L1PB2 LINE L1 -8 6143 5924 396 92 67 17 chr2 2578390 2578510 -248109344 + (TCTA)n Simple_repeat Simple_repeat 4 129 0 227 342 70 27 chr2 2580326 2580513 -248107341 + L2 LINE L2 2905 3099 -173 323 305 24 54 chr2 2581096 2581263 -248106591 - MIR3 SINE MIR -15 193 32 735 158 38 0 chr2 2582013 2582146 -248105708 + L1PB4 LINE L1 6019 6156 0 405 206 109 0 chr2 2582555 2582647 -248105207 - Tigger1 DNA MER2_type 0 2418 2317 1159 206 25 4 chr2 2582649 2582925 -248104929 + L1MA4 LINE L1 6012 6293 -7 13293 138 42 4 chr2 2583144 2585345 -248102509 - Tigger1 DNA MER2_type -134 2284 1 278 297 71 34 chr2 2587353 2587619 -248100235 + L1ME4a LINE L1 5622 5897 -224 367 73 18 0 chr2 2587842 2587897 -248099957 - L1PB3 LINE L1 -3 6151 6096 361 189 301 35 chr2 2590250 2590393 -248097461 - MER5A DNA MER1_type -4 185 5 234 234 16 0 chr2 2590729 2590793 -248097061 + MLT1L LTR MaLR 550 614 -1 185 259 93 0 chr2 2593651 2593705 -248094149 - MIR SINE MIR -87 175 117 4532 176 26 6 chr2 2593795 2595566 -248092288 + L1PA16 LINE L1 4326 6166 0 22 56 0 0 chr2 2595890 2595926 -248091928 + AT_rich Low_complexity Low_complexity 1 36 0 2333 119 3 0 chr2 2596203 2596514 -248091340 - AluSx SINE Alu 0 312 1 627 351 39 0 chr2 2597899 2598204 -248089650 - MER58B DNA MER1_type 0 341 25 263 183 28 0 chr2 2598570 2598641 -248089213 + (CAGA)n Simple_repeat Simple_repeat 3 75 0 2365 64 0 0 chr2 2599054 2599350 -248088504 - AluY SINE Alu -15 296 1 294 184 105 26 chr2 2599402 2599478 -248088376 + L1PB4 LINE L1 6070 6151 -5 362 191 0 0 chr2 2600471 2600534 -248087320 - AluSx SINE Alu -5 297 235 1239 131 0 0 chr2 2600536 2600711 -248087143 - AluSx SINE Alu -137 175 1 25 0 0 0 chr2 2600894 2600919 -248086935 + AT_rich Low_complexity Low_complexity 1 25 0 419 243 30 65 chr2 2601229 2601398 -248086456 - MER5B DNA MER1_type -10 168 6 291 114 0 0 chr2 2602678 2602722 -248085132 + (TG)n Simple_repeat Simple_repeat 2 45 0 910 238 94 20 chr2 2602759 2603100 -248084754 - L1MD3 LINE L1 -8 7987 7622 1973 127 0 10 chr2 2603114 2603422 -248084432 - AluSx SINE Alu -7 305 1 839 128 6 70 chr2 2603480 2603549 -248084305 - AluSx SINE Alu -109 203 131 1915 68 0 12 chr2 2603549 2603797 -248084057 - AluY SINE Alu -16 295 51 839 128 6 70 chr2 2603797 2603883 -248083971 - AluSx SINE Alu -181 131 58 2098 99 7 0 chr2 2604110 2604403 -248083451 - AluSq SINE Alu -16 297 3 1705 144 0 75 chr2 2605547 2605668 -248082186 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr2 2605668 2605688 -248082166 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1705 144 0 75 chr2 2605688 2605900 -248081954 + AluJo SINE Alu 129 309 -3 22 0 0 0 chr2 2607691 2607713 -248080141 + AT_rich Low_complexity Low_complexity 1 22 0 772 176 0 22 chr2 2607870 2608006 -248079848 - AluJb SINE Alu -11 301 169 329 379 38 17 chr2 2608007 2608242 -248079612 + L1ME4a LINE L1 5653 5892 -229 195 316 63 25 chr2 2608408 2608487 -248079367 + MIR SINE MIR 84 165 -97 22 35 0 0 chr2 2611380 2611409 -248076445 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 7 chr2 2612727 2613037 -248074817 + AluSg SINE Alu 3 310 0 182 333 76 31 chr2 2613287 2613641 -248074213 + L2 LINE L2 2257 2626 -688 297 284 115 34 chr2 2614302 2614451 -248073403 - MIR3 SINE MIR -51 157 44 434 216 128 24 chr2 2615600 2615725 -248072129 - MIR3 SINE MIR -26 182 45 207 226 19 0 chr2 2618085 2618138 -248069716 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 198 91 0 0 chr2 2618462 2618495 -248069359 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1777 45 45 0 chr2 2618495 2618718 -248069136 - AluY SINE Alu -27 284 52 187 70 116 0 chr2 2619046 2619089 -248068765 + A-rich Low_complexity Low_complexity 3 50 0 242 215 13 38 chr2 2620162 2620241 -248067613 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 21 0 0 0 chr2 2620309 2620330 -248067524 + AT_rich Low_complexity Low_complexity 1 21 0 185 128 0 26 chr2 2622019 2622058 -248065796 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1738 139 85 0 chr2 2625309 2625590 -248062264 - AluSx SINE Alu -7 305 1 1670 154 49 0 chr2 2626706 2626991 -248060863 - AluJb SINE Alu -13 299 1 231 311 78 0 chr2 2628485 2628575 -248059279 - MIR3 SINE MIR -16 192 96 643 123 61 0 chr2 2629526 2629640 -248058214 - L1PA15 LINE L1 -7 6158 6038 625 281 144 22 chr2 2631238 2631598 -248056256 - L2 LINE L2 -62 3251 2848 398 249 67 61 chr2 2632508 2632673 -248055181 + MER3 DNA MER1_type 40 205 -4 2414 53 3 0 chr2 2632720 2633023 -248054831 - AluY SINE Alu -7 304 1 222 214 29 14 chr2 2633036 2633106 -248054748 + (TA)n Simple_repeat Simple_repeat 2 72 0 213 139 0 0 chr2 2633408 2633451 -248054403 + (TC)n Simple_repeat Simple_repeat 2 44 0 387 0 0 0 chr2 2633478 2633521 -248054333 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 230 107 89 chr2 2634302 2634476 -248053378 - MIR SINE MIR -50 212 36 1996 126 0 13 chr2 2634671 2634973 -248052881 - AluSp SINE Alu -15 298 1 197 239 65 98 chr2 2637433 2637525 -248050329 + MIR SINE MIR 117 205 -57 311 326 61 15 chr2 2640386 2640518 -248047336 + L1MC4 LINE L1 6582 6719 -1323 * 326 300 0 55 chr2 2640455 2640565 -248047289 - L1MC4 LINE L1 -1340 6702 6599 234 62 0 0 chr2 2640910 2640942 -248046912 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 576 184 0 0 chr2 2641736 2641883 -248045971 + CT-rich Low_complexity Low_complexity 1 147 0 207 179 0 0 chr2 2641909 2641948 -248045906 + CT-rich Low_complexity Low_complexity 2 40 0 25 75 0 0 chr2 2642480 2642533 -248045321 + AT_rich Low_complexity Low_complexity 1 53 0 1333 87 108 0 chr2 2642852 2643047 -248044807 - L1PA5 LINE L1 0 6154 5939 243 250 66 26 chr2 2643524 2643600 -248044254 + L2 LINE L2 3235 3313 0 352 303 61 36 chr2 2644315 2644480 -248043374 + MIR SINE MIR 86 254 -8 3334 106 42 15 chr2 2644711 2645191 -248042663 + MER1A DNA MER1_type 37 529 0 353 267 95 9 chr2 2645240 2645356 -248042498 + MIR3 SINE MIR 69 194 -14 464 277 85 43 chr2 2648750 2648938 -248038916 - MIR SINE MIR -2 260 65 254 294 50 89 chr2 2648917 2649097 -248038757 + MIR SINE MIR 79 251 -11 * 182 122 0 41 chr2 2649255 2649304 -248038550 + (CAGAGA)n Simple_repeat Simple_repeat 5 51 0 218 226 16 0 chr2 2649356 2649418 -248038436 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 191 360 10 10 chr2 2649565 2649665 -248038189 - L2 LINE L2 -600 2714 2615 200 290 81 0 chr2 2650377 2650439 -248037415 + MIR SINE MIR 82 148 -60 30 59 0 0 chr2 2650760 2650811 -248037043 + AT_rich Low_complexity Low_complexity 1 51 0 186 43 0 0 chr2 2651437 2651460 -248036394 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 813 133 7 46 chr2 2652731 2652882 -248034972 + FRAM SINE Alu 22 166 -10 2394 83 0 6 chr2 2653125 2653439 -248034415 + AluSx SINE Alu 1 312 0 1004 112 0 0 chr2 2657123 2657257 -248030597 + AluSq/x SINE Alu 1 134 -178 2014 128 0 0 chr2 2657260 2657549 -248030305 + AluSx SINE Alu 3 291 -21 2186 98 0 0 chr2 2658036 2658332 -248029522 + AluSx SINE Alu 1 296 -16 295 366 9 18 chr2 2658562 2658674 -248029180 - MIR3 SINE MIR -52 156 46 1203 124 0 0 chr2 2659176 2659361 -248028493 + L1MA2 LINE L1 6120 6304 0 290 143 44 0 chr2 2661832 2661923 -248025931 + (TA)n Simple_repeat Simple_repeat 2 96 0 267 130 29 14 chr2 2661952 2662021 -248025833 + (TA)n Simple_repeat Simple_repeat 1 70 0 349 333 42 0 chr2 2662250 2662370 -248025484 - MIR SINE MIR -50 212 88 186 43 0 0 chr2 2663165 2663188 -248024666 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 358 306 20 61 chr2 2664172 2664368 -248023486 - L2 LINE L2 -208 3064 2877 195 380 0 0 chr2 2664931 2665010 -248022844 + MIR SINE MIR 172 250 -12 21 0 0 0 chr2 2665625 2665646 -248022208 + AT_rich Low_complexity Low_complexity 1 21 0 1252 181 104 4 chr2 2665913 2666173 -248021681 - AluJo SINE Alu -26 286 1 2397 73 0 0 chr2 2666182 2666485 -248021369 - AluY SINE Alu -8 303 1 221 240 20 0 chr2 2667759 2667809 -248020045 + L2 LINE L2 3222 3272 0 228 122 0 0 chr2 2668987 2669028 -248018826 + (T)n Simple_repeat Simple_repeat 1 41 0 232 316 124 28 chr2 2670239 2670416 -248017438 + MIR SINE MIR 42 235 -27 581 126 0 0 chr2 2670418 2670505 -248017349 - AluJ/FLAM SINE Alu -225 87 1 218 333 0 0 chr2 2671122 2671182 -248016672 + L2 LINE L2 3205 3264 -8 2219 101 3 3 chr2 2671391 2671699 -248016155 + AluSq SINE Alu 1 308 -5 183 375 0 39 chr2 2671994 2672098 -248015756 + L2 LINE L2 3195 3294 -19 276 350 21 0 chr2 2672194 2672291 -248015563 + MIR SINE MIR 13 111 -151 1080 195 107 7 chr2 2672983 2673255 -248014599 - AluJb SINE Alu -13 299 1 5128 87 13 1 chr2 2674257 2674933 -248012921 + LTR8 LTR ERV1 8 691 0 310 317 7 7 chr2 2675130 2675272 -248012582 - L1ME4a LINE L1 -224 5897 5756 25 0 0 0 chr2 2676430 2676455 -248011399 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 2676548 2676570 -248011284 + AT_rich Low_complexity Low_complexity 1 22 0 385 283 76 7 chr2 2678898 2679059 -248008795 + MIR SINE MIR 3 167 -66 212 83 0 28 chr2 2680564 2680600 -248007254 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 180 307 120 0 chr2 2680992 2681067 -248006787 - L2 LINE L2 -5 3267 3184 22 35 0 0 chr2 2681211 2681240 -248006614 + AT_rich Low_complexity Low_complexity 1 29 0 354 305 48 45 chr2 2682645 2683042 -248004812 - HAL1 LINE L1 -1047 1460 1063 261 327 106 0 chr2 2683254 2683367 -248004487 - MIR SINE MIR -79 183 59 273 323 62 73 chr2 2683620 2683880 -248003974 + MER112 DNA MER1_type 3 259 -1 1874 130 29 69 chr2 2684353 2684729 -248003125 + THE1C LTR MaLR 15 375 0 474 294 0 0 chr2 2685602 2685848 -248002006 + CT-rich Low_complexity Low_complexity 1 246 0 269 331 0 0 chr2 2685999 2686168 -248001686 + CT-rich Low_complexity Low_complexity 3 171 0 290 322 0 6 chr2 2686255 2686435 -248001419 + CT-rich Low_complexity Low_complexity 1 179 0 283 325 0 0 chr2 2686556 2686725 -248001129 + CT-rich Low_complexity Low_complexity 3 171 0 229 346 0 0 chr2 2686638 2686817 -248001037 + (CTTG)n Simple_repeat Simple_repeat 2 180 0 * 445 278 6 6 chr2 2687106 2687286 -248000568 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 244 329 0 0 chr2 2687264 2687506 -248000348 + (CATG)n Simple_repeat Simple_repeat 1 242 0 * 2794 209 86 38 chr2 2687602 2687912 -247999942 - L1MA9 LINE L1 -38 6274 5980 2032 138 0 0 chr2 2687912 2688217 -247999637 - AluSx SINE Alu -5 307 3 2794 209 86 38 chr2 2688217 2688388 -247999466 - L1MA9 LINE L1 -332 5980 5819 180 0 0 0 chr2 2688388 2688408 -247999446 + (TA)n Simple_repeat Simple_repeat 2 21 0 2794 209 86 38 chr2 2688408 2688696 -247999158 - L1MA9 LINE L1 -493 5819 5467 906 118 105 0 chr2 2688696 2688849 -247999005 - MER4C LTR ERV1 0 465 297 * 1246 116 0 5 chr2 2688842 2689031 -247998823 - MER4C LTR ERV1 -277 188 1 6334 201 19 39 chr2 2689032 2689067 -247998787 - L1MA9 LINE L1 -714 5469 5435 3109 165 100 27 chr2 2689067 2689744 -247998110 + LTR8A LTR ERV1 1 727 0 6334 201 19 39 chr2 2689744 2691410 -247996444 - L1MA9 LINE L1 -748 5435 3808 2238 207 57 117 chr2 2692070 2692450 -247995404 + L1MB8 LINE L1 4700 5101 -1077 2031 110 0 43 chr2 2692450 2692776 -247995078 + AluSx SINE Alu 1 312 0 2238 207 57 117 chr2 2692776 2693895 -247993959 + L1MB8 LINE L1 5101 6097 -81 2138 232 44 13 chr2 2693901 2694422 -247993432 + MER44D DNA MER2_type 9 600 -5 424 127 42 0 chr2 2694430 2694501 -247993353 + L1MB7 LINE L1 6101 6174 -10 234 336 91 11 chr2 2697380 2697654 -247990200 - L2 LINE L2 -4 3309 3014 381 102 0 0 chr2 2698976 2699035 -247988819 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 2613 105 8 3 chr2 2700381 2700742 -247987112 + THE1B LTR MaLR 2 364 0 1869 154 14 0 chr2 2701130 2701423 -247986431 - AluJb SINE Alu -15 297 1 2415 74 0 0 chr2 2702894 2703192 -247984662 + AluY SINE Alu 1 298 -13 939 158 7 0 chr2 2703833 2703985 -247983869 + MER50 LTR ERV1 452 604 -130 446 213 11 20 chr2 2705458 2705573 -247982281 - L1MA6 LINE L1 -147 6154 6042 235 298 193 9 chr2 2709996 2710110 -247977744 - L2 LINE L2 -1 3271 3137 2440 119 25 0 chr2 2710530 2710884 -247976970 - THE1B LTR MaLR 0 364 2 2109 104 0 0 chr2 2711361 2711658 -247976196 - AluY SINE Alu 0 312 16 246 291 39 39 chr2 2715273 2715376 -247972478 + MIR3 SINE MIR 13 115 -93 538 360 93 15 chr2 2717643 2718503 -247969351 + L2 LINE L2 2345 3272 -41 1979 140 10 0 chr2 2718644 2718944 -247968910 + AluSx SINE Alu 1 303 -9 227 350 26 43 chr2 2719077 2719194 -247968660 + L2 LINE L2 3072 3186 -86 960 174 0 0 chr2 2720417 2720572 -247967282 + FRAM SINE Alu 5 159 -7 23 33 0 0 chr2 2721956 2721986 -247965868 + AT_rich Low_complexity Low_complexity 1 30 0 1060 259 4 0 chr2 2723269 2723512 -247964342 + MER47B DNA MER2_type 175 418 0 389 335 71 8 chr2 2724149 2724388 -247963466 + L2 LINE L2 490 743 -2571 352 235 147 59 chr2 2727387 2727626 -247960228 - L1MC4a LINE L1 -165 5956 5695 249 316 89 48 chr2 2727631 2727799 -247960055 - MIR SINE MIR 0 262 88 229 217 142 9 chr2 2728094 2728200 -247959654 - L1MC4a LINE L1 -2408 5400 5281 422 312 0 32 chr2 2730569 2730694 -247957160 + MIR SINE MIR 10 130 -132 219 69 0 0 chr2 2730712 2730741 -247957113 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 2126 134 36 36 chr2 2730744 2731102 -247956752 + THE1B LTR MaLR 7 364 0 202 216 0 0 chr2 2731104 2731141 -247956713 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 247 220 60 70 chr2 2731141 2731241 -247956613 + MIR SINE MIR 152 250 -12 4028 195 69 24 chr2 2733039 2734590 -247953264 + L1MB3 LINE L1 4571 6177 -6 249 291 34 11 chr2 2735989 2736164 -247951690 + (AGATG)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr2 2736553 2736576 -247951278 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr2 2737647 2737677 -247950177 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1037 205 122 42 chr2 2738098 2738434 -247949420 - L1MD2 LINE L1 -10 6349 5987 3183 226 51 10 chr2 2738726 2739610 -247948244 - L1MD2 LINE L1 -324 6035 5120 311 313 12 38 chr2 2739624 2739784 -247948070 + L2 LINE L2 3158 3313 0 352 118 40 26 chr2 2741820 2741896 -247945958 + C-rich Low_complexity Low_complexity 2 78 0 403 192 10 10 chr2 2741915 2742014 -247945840 + CT-rich Low_complexity Low_complexity 1 99 0 24 67 0 0 chr2 2742103 2742148 -247945706 + AT_rich Low_complexity Low_complexity 1 45 0 879 292 134 60 chr2 2742976 2744626 -247943228 - HAL1 LINE L1 -3 2504 732 2230 132 0 0 chr2 2744717 2745028 -247942826 + AluSq SINE Alu 1 311 -2 1592 179 11 7 chr2 2746092 2746377 -247941477 + AluJb SINE Alu 21 306 -6 29 0 0 0 chr2 2746445 2746474 -247941380 + AT_rich Low_complexity Low_complexity 1 29 0 420 20 0 0 chr2 2746979 2747028 -247940826 + (CA)n Simple_repeat Simple_repeat 2 50 0 238 274 12 24 chr2 2747423 2747507 -247940347 - MIR SINE MIR -25 237 155 233 315 47 24 chr2 2747547 2747674 -247940180 + MIR SINE MIR 62 191 -71 437 303 106 31 chr2 2747997 2748610 -247939244 + L1ME LINE L1 4366 5024 -1122 562 205 131 0 chr2 2748622 2748744 -247939110 + FLAM_C SINE Alu 6 143 0 343 275 118 26 chr2 2748750 2749186 -247938668 + L1ME LINE L1 5030 5506 -656 2583 191 19 56 chr2 2750639 2750841 -247937013 - MER44D DNA MER2_type -1882 605 397 2187 102 3 3 chr2 2750841 2751121 -247936733 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr2 2751121 2751142 -247936712 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2187 102 3 3 chr2 2751142 2751156 -247936698 + AluSx SINE Alu 282 295 -17 2583 191 19 56 chr2 2751156 2751524 -247936330 - MER44D DNA MER2_type -2090 397 1 1201 200 136 4 chr2 2752085 2752350 -247935504 + AluJo SINE Alu 3 302 0 3319 87 20 0 chr2 2753450 2753909 -247933945 + L1PA13 LINE L1 5696 6163 0 2269 103 0 0 chr2 2753912 2754193 -247933661 + AluSp SINE Alu 1 281 -32 261 0 0 0 chr2 2754193 2754222 -247933632 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 362 216 0 9 chr2 2757686 2757797 -247930057 + (CA)n Simple_repeat Simple_repeat 2 111 0 508 238 39 33 chr2 2759002 2759183 -247928671 + MIR SINE MIR 22 203 -59 514 219 182 0 chr2 2759387 2759574 -247928280 + L1MC5 LINE L1 7008 7228 -733 938 246 56 58 chr2 2759724 2760002 -247927852 + L1MC5 LINE L1 7304 7583 -378 2046 97 29 14 chr2 2760002 2760303 -247927551 + AluSx SINE Alu 1 305 0 938 246 56 58 chr2 2760303 2760539 -247927315 + L1MC5 LINE L1 7583 7818 -143 2400 65 0 40 chr2 2762511 2762834 -247925020 + AluY SINE Alu 1 310 -1 30 45 0 0 chr2 2763089 2763133 -247924721 + AT_rich Low_complexity Low_complexity 1 44 0 435 149 0 0 chr2 2764356 2764430 -247923424 + (CA)n Simple_repeat Simple_repeat 1 74 0 311 204 66 72 chr2 2764493 2764660 -247923194 - L1MC4 LINE L1 -188 7854 7689 27 100 0 0 chr2 2764937 2765027 -247922827 + AT_rich Low_complexity Low_complexity 1 90 0 212 297 0 14 chr2 2765195 2765269 -247922585 + CT-rich Low_complexity Low_complexity 4 76 0 280 295 114 0 chr2 2765538 2765643 -247922211 + MIR SINE MIR 24 140 -122 269 266 75 0 chr2 2765950 2766044 -247921810 - L1MC4a LINE L1 -1910 5898 5798 190 328 74 16 chr2 2766165 2766287 -247921567 - MIR SINE MIR -5 257 129 21 0 0 0 chr2 2767058 2767079 -247920775 + AT_rich Low_complexity Low_complexity 1 21 0 307 294 103 38 chr2 2768061 2768245 -247919609 - MIR SINE MIR -29 233 38 555 278 57 10 chr2 2769391 2769600 -247918254 + MER58A DNA MER1_type 2 220 -4 198 103 0 0 chr2 2770683 2770712 -247917142 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2312 109 43 3 chr2 2772284 2772634 -247915220 + L1PA16 LINE L1 5793 6156 -10 368 82 16 0 chr2 2774151 2774212 -247913642 + (CA)n Simple_repeat Simple_repeat 2 63 0 24 103 0 0 chr2 2774252 2774339 -247913515 + AT_rich Low_complexity Low_complexity 1 87 0 22 70 0 0 chr2 2774675 2774718 -247913136 + AT_rich Low_complexity Low_complexity 1 43 0 1848 153 33 24 chr2 2776717 2777051 -247910803 - MER1B DNA MER1_type 0 337 1 340 273 80 33 chr2 2777231 2777381 -247910473 + MER103 DNA DNA 10 166 0 225 178 0 0 chr2 2777611 2777656 -247910198 + CT-rich Low_complexity Low_complexity 3 47 0 297 320 0 0 chr2 2779295 2779370 -247908484 + polypurine Low_complexity Low_complexity 3 77 0 497 99 0 0 chr2 2779470 2779541 -247908313 + L1P3 LINE L1 5384 5454 -700 265 127 0 111 chr2 2779532 2779595 -247908259 + L1MA8 LINE L1 6236 6291 0 * 366 290 55 45 chr2 2781143 2781343 -247906511 - L2 LINE L2 -534 2780 2579 205 316 11 0 chr2 2781398 2781493 -247906361 - L2 LINE L2 -939 2375 2280 223 353 88 0 chr2 2781772 2781908 -247905946 + L2 LINE L2 2211 2358 -956 1777 189 54 23 chr2 2781985 2782082 -247905772 - MLT1A1 LTR MaLR 0 365 272 1675 137 103 37 chr2 2782082 2782432 -247905422 + THE1C LTR MaLR 3 375 0 1777 189 54 23 chr2 2782432 2782688 -247905166 - MLT1A1 LTR MaLR -93 272 1 423 247 147 65 chr2 2784353 2784584 -247903270 - MIR SINE MIR 0 262 13 261 234 68 104 chr2 2785223 2785415 -247902439 + L1MB7 LINE L1 72 256 -6286 778 299 74 11 chr2 2785579 2785943 -247901911 + L1MB7 LINE L1 485 871 -5671 2433 267 49 39 chr2 2786130 2788261 -247899593 + L1MB7 LINE L1 946 3081 -3563 * 3218 219 29 54 chr2 2788249 2788337 -247899517 + L1MB7 LINE L1 4755 4844 -1838 1717 181 79 18 chr2 2788337 2788679 -247899175 + MLT1A1 LTR MaLR 3 365 0 3218 219 29 54 chr2 2788679 2789007 -247898847 + L1MB7 LINE L1 4844 5179 -1503 2421 76 0 22 chr2 2789007 2789324 -247898530 + AluY SINE Alu 1 310 -1 3218 219 29 54 chr2 2789324 2790334 -247897520 + L1MB7 LINE L1 5179 6140 -542 1417 208 7 13 chr2 2790357 2790665 -247897189 + L1MB7 LINE L1 6362 6667 -15 2241 89 0 11 chr2 2791203 2791523 -247896331 - AluSg SINE Alu 0 318 2 234 204 0 20 chr2 2793867 2793916 -247893938 + MLT1E LTR MaLR 113 160 -433 666 287 46 26 chr2 2793986 2794293 -247893561 + MLT1E LTR MaLR 281 593 0 280 281 12 12 chr2 2795113 2795195 -247892659 + L2 LINE L2 3187 3268 -4 240 357 25 25 chr2 2797387 2797583 -247890271 + MIR SINE MIR 44 239 -23 242 261 18 45 chr2 2799052 2799163 -247888691 - MIR3 SINE MIR -4 204 97 303 49 0 0 chr2 2799203 2799244 -247888610 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 194 278 0 37 chr2 2799291 2799345 -247888509 + MIR SINE MIR 66 117 -91 2152 252 63 18 chr2 2799544 2799729 -247888125 + MER82 DNA MER2_type 12 187 -466 14525 135 26 18 chr2 2799729 2802122 -247885732 - Tigger1 DNA MER2_type 0 2418 5 2152 252 63 18 chr2 2802122 2802550 -247885304 + MER82 DNA MER2_type 187 653 0 22 0 0 0 chr2 2802564 2802586 -247885268 + AT_rich Low_complexity Low_complexity 1 22 0 6003 42 0 0 chr2 2802913 2803643 -247884211 - L1PA5 LINE L1 -743 5403 4674 6452 41 1 4 chr2 2803643 2804403 -247883451 + L1PA5 LINE L1 5390 6151 -3 21 0 0 0 chr2 2805525 2805546 -247882308 + AT_rich Low_complexity Low_complexity 1 21 0 1825 176 58 6 chr2 2807253 2807600 -247880254 + MSTB LTR MaLR 2 366 -60 716 199 28 33 chr2 2807985 2808166 -247879688 + MER20 DNA MER1_type 7 186 -33 206 245 20 0 chr2 2810933 2810982 -247876872 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 791 183 4 0 chr2 2811003 2811273 -247876581 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 351 0 0 0 chr2 2812102 2812141 -247875713 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 2812398 2812426 -247875428 + AT_rich Low_complexity Low_complexity 1 28 0 1928 141 0 21 chr2 2815827 2816152 -247871702 + AluSx SINE Alu 1 319 0 226 292 60 77 chr2 2816469 2816637 -247871217 + MIR SINE MIR 81 245 -17 770 282 18 0 chr2 2816770 2816990 -247870864 + MER58A DNA MER1_type 1 224 0 441 0 0 0 chr2 2819373 2819422 -247868432 + (TA)n Simple_repeat Simple_repeat 1 49 0 306 287 39 39 chr2 2819819 2819948 -247867906 + L2 LINE L2 1744 1872 -1442 433 188 0 26 chr2 2820028 2820145 -247867709 + CT-rich Low_complexity Low_complexity 3 116 0 389 299 81 11 chr2 2820257 2820528 -247867326 - LTR16A LTR ERVL -16 434 145 221 311 19 9 chr2 2820703 2820809 -247867045 + L2 LINE L2 2229 2335 -979 223 277 40 30 chr2 2822084 2822185 -247865669 - MER5A DNA MER1_type -74 115 14 214 373 77 21 chr2 2823913 2824146 -247863708 + L2 LINE L2 3006 3251 -62 180 111 0 0 chr2 2824186 2824213 -247863641 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 452 232 48 16 chr2 2824748 2824873 -247862981 + L2 LINE L2 3185 3313 0 496 305 30 39 chr2 2826015 2826303 -247861551 + MLT1H1 LTR MaLR 12 297 -288 61 58 0 0 chr2 2827547 2827650 -247860204 + AT_rich Low_complexity Low_complexity 1 103 0 28 0 0 0 chr2 2829964 2829992 -247857862 + AT_rich Low_complexity Low_complexity 1 28 0 1898 98 4 23 chr2 2830706 2830970 -247856884 - AluSg SINE Alu -51 259 1 2312 90 0 13 chr2 2830972 2831273 -247856581 - AluSg SINE Alu -6 304 8 459 323 17 43 chr2 2831668 2831900 -247855954 + MIR SINE MIR 18 243 -19 360 0 0 0 chr2 2832333 2832373 -247855481 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr2 2832372 2832392 -247855462 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1029 213 153 67 chr2 2832743 2832887 -247854967 + MLT1D LTR MaLR 1 131 -374 2065 130 138 5 chr2 2832887 2833265 -247854589 + MSTA LTR MaLR 1 428 0 1029 213 153 67 chr2 2833265 2833585 -247854269 + MLT1D LTR MaLR 131 505 0 2266 113 0 0 chr2 2833795 2834095 -247853759 - AluSx SINE Alu -12 300 1 321 315 87 8 chr2 2834932 2835059 -247852795 + L2 LINE L2 3136 3272 0 1177 73 12 6 chr2 2836585 2836750 -247851104 - L1PA13 LINE L1 -4 6159 5994 318 281 132 12 chr2 2837348 2837515 -247850339 + MIR SINE MIR 20 206 -56 1821 139 10 23 chr2 2837648 2837951 -247849903 - AluSq SINE Alu -14 299 1 21 0 0 0 chr2 2838132 2838153 -247849701 + AT_rich Low_complexity Low_complexity 1 21 0 355 340 69 14 chr2 2838266 2838554 -247849300 + L1 LINE L1 4031 4334 -1812 239 296 0 20 chr2 2838857 2838955 -247848899 + L1 LINE L1 4741 4836 -1310 2659 40 0 0 chr2 2839124 2839421 -247848433 + AluY SINE Alu 1 297 -14 2254 110 3 3 chr2 2841404 2841705 -247846149 - AluSc SINE Alu -8 301 1 3941 60 12 6 chr2 2841746 2842249 -247845605 + L1PA8 LINE L1 5662 6167 -5 1271 182 121 49 chr2 2843947 2844294 -247843560 + MLT1A2 LTR MaLR 1 372 -2 2969 85 3 6 chr2 2844620 2844985 -247842869 + THE1B LTR MaLR 1 364 0 2064 62 4 0 chr2 2845391 2845650 -247842204 + L1PA8 LINE L1 5662 5921 -251 12122 31 2 4 chr2 2846227 2848353 -247839501 + L1PA3 LINE L1 4031 6155 0 2225 85 0 72 chr2 2848835 2849173 -247838681 + AluSx SINE Alu 1 312 0 2393 90 3 0 chr2 2849920 2850230 -247837624 - AluY SINE Alu 0 311 1 1047 125 0 0 chr2 2850230 2850366 -247837488 - AluSq/x SINE Alu -177 136 1 21 0 0 0 chr2 2850810 2850831 -247837023 + AT_rich Low_complexity Low_complexity 1 21 0 2234 112 0 0 chr2 2852188 2852483 -247835371 - AluSx SINE Alu -16 296 2 401 322 32 20 chr2 2902990 2903207 -247784647 - MIR SINE MIR -31 231 17 22 0 0 0 chr2 2904376 2904398 -247783456 + AT_rich Low_complexity Low_complexity 1 22 0 1063 188 58 21 chr2 2904523 2904763 -247783091 - AluJo SINE Alu -2 310 62 1847 157 0 40 chr2 2906515 2906840 -247781014 - AluJb SINE Alu 0 312 1 23 0 0 0 chr2 2906847 2906870 -247780984 + AT_rich Low_complexity Low_complexity 1 23 0 208 261 29 43 chr2 2908150 2908219 -247779635 + L2 LINE L2 3246 3313 0 711 192 0 0 chr2 2911061 2911708 -247776146 + (CAACC)n Simple_repeat Simple_repeat 1 647 0 2220 135 6 0 chr2 2911789 2912100 -247775754 - AluSp SINE Alu 0 313 1 247 329 13 0 chr2 2913246 2913325 -247774529 + MIR3 SINE MIR 81 160 -48 191 293 52 43 chr2 2913952 2914068 -247773786 + MIR SINE MIR 48 164 -98 1796 137 22 4 chr2 2915000 2915299 -247772555 + AluSq SINE Alu 1 304 0 180 0 0 0 chr2 2916260 2916280 -247771574 + (TG)n Simple_repeat Simple_repeat 1 20 0 1163 191 120 11 chr2 2916649 2916916 -247770938 + L1MB3 LINE L1 5695 5990 -193 306 206 43 33 chr2 2917005 2917097 -247770757 + GA-rich Low_complexity Low_complexity 4 96 0 196 264 0 0 chr2 2917485 2917538 -247770316 + L2 LINE L2 3261 3313 0 1372 176 58 6 chr2 2920810 2921089 -247766765 + MLT1D LTR MaLR 250 505 0 183 289 0 0 chr2 2921573 2921618 -247766236 - L2 LINE L2 -11 3302 3258 11861 187 20 9 chr2 2922001 2924502 -247763352 + L1MA2 LINE L1 3530 6055 -1510 6717 127 27 2 chr2 2924500 2925796 -247762058 + L1MA2 LINE L1 6399 7723 0 * 29 78 0 0 chr2 2925879 2925943 -247761911 + AT_rich Low_complexity Low_complexity 1 64 0 411 200 17 9 chr2 2926818 2926933 -247760921 + GA-rich Low_complexity Low_complexity 2 117 0 24 0 0 0 chr2 2927946 2927970 -247759884 + AT_rich Low_complexity Low_complexity 1 24 0 236 213 0 0 chr2 2928105 2928152 -247759702 + A-rich Low_complexity Low_complexity 1 47 0 324 248 59 20 chr2 2929508 2929609 -247758245 + MIR SINE MIR 158 262 0 779 263 42 9 chr2 2931329 2931546 -247756308 + MER58A DNA MER1_type 1 224 0 570 245 34 0 chr2 2932006 2932153 -247755701 - MER5A DNA MER1_type -32 157 6 507 101 0 14 chr2 2932384 2932453 -247755401 + Alu SINE Alu 6 73 -236 739 211 33 33 chr2 2932458 2932638 -247755216 + L1MA9 LINE L1 6004 6183 -129 345 40 0 40 chr2 2932629 2932679 -247755175 - L1HS LINE L1 -1715 4431 4384 * 8347 34 2 2 chr2 2932668 2934549 -247753305 + L1HS LINE L1 4432 6312 0 231 330 45 57 chr2 2934759 2934935 -247752919 + MIR SINE MIR 47 220 -42 355 248 53 53 chr2 2935158 2935291 -247752563 + MIR SINE MIR 60 192 -70 351 96 0 0 chr2 2936106 2936158 -247751696 + (TG)n Simple_repeat Simple_repeat 2 53 0 353 265 12 0 chr2 2937086 2937169 -247750685 + L2 LINE L2 3230 3313 0 290 83 0 42 chr2 2937314 2937383 -247750471 + Alu SINE Alu 249 301 0 2427 67 0 3 chr2 2937394 2937693 -247750161 + AluY SINE Alu 1 298 -13 196 75 25 25 chr2 2937899 2937939 -247749915 + (TA)n Simple_repeat Simple_repeat 2 41 0 387 103 17 0 chr2 2938891 2938949 -247748905 + L1PA5 LINE L1 6092 6150 -4 287 319 101 17 chr2 2939013 2939132 -247748722 - MIR3 SINE MIR -68 140 12 434 335 53 33 chr2 2939905 2940005 -247747849 + MIR SINE MIR 13 109 -153 1922 101 77 14 chr2 2940005 2940291 -247747563 - AluSq SINE Alu -9 304 1 434 335 53 33 chr2 2940291 2940435 -247747419 + MIR SINE MIR 109 262 0 239 301 147 15 chr2 2940633 2940769 -247747085 + MIR SINE MIR 84 237 -25 370 289 59 15 chr2 2941046 2941181 -247746673 - MIR SINE MIR -24 238 98 2416 117 33 22 chr2 2941614 2941974 -247745880 + THE1B LTR MaLR 1 364 0 261 283 50 0 chr2 2942295 2942414 -247745440 - MIR SINE MIR -61 147 21 190 257 115 35 chr2 2944251 2944364 -247743490 - MER5C DNA MER1_type -202 122 1 972 264 54 20 chr2 2944948 2945300 -247742554 + MLT1A1 LTR MaLR 2 365 0 568 241 41 6 chr2 2946556 2946726 -247741128 - MLT1B LTR MaLR -6 384 209 238 83 0 56 chr2 2946821 2946857 -247740997 - MLT1B LTR MaLR -356 34 1 517 274 148 16 chr2 2947598 2947971 -247739883 + L2 LINE L2 2244 2665 -649 1073 163 24 0 chr2 2949061 2949270 -247738584 + L1MA4 LINE L1 6081 6294 -6 383 200 0 11 chr2 2949278 2949368 -247738486 + GA-rich Low_complexity Low_complexity 3 91 0 396 0 0 0 chr2 2950186 2950230 -247737624 + (TG)n Simple_repeat Simple_repeat 1 44 0 2007 104 54 17 chr2 2951955 2952253 -247735601 - AluY SINE Alu -2 309 1 406 311 67 16 chr2 2953182 2953375 -247734479 - MIR SINE MIR -51 211 9 558 238 41 74 chr2 2953393 2953758 -247734096 - L1MC5 LINE L1 -35 7926 7574 239 253 13 0 chr2 2954363 2954442 -247733412 + GA-rich Low_complexity Low_complexity 1 80 0 544 161 8 15 chr2 2954465 2954595 -247733259 + GA-rich Low_complexity Low_complexity 4 132 0 292 264 56 16 chr2 2955516 2955641 -247732213 + MIR SINE MIR 89 218 -44 249 282 84 0 chr2 2955833 2955904 -247731950 - MIR3 SINE MIR -37 171 95 2314 113 50 14 chr2 2955984 2956346 -247731508 + THE1C LTR MaLR 1 375 0 309 350 122 0 chr2 2956726 2956906 -247730948 + L3 LINE CR1 1284 1485 -92 209 310 11 23 chr2 2957175 2957262 -247730592 + L2 LINE L2 3227 3312 -1 313 308 58 24 chr2 2957522 2957730 -247730124 + L1ME LINE L1 5590 5804 -317 2024 135 0 0 chr2 2957776 2958058 -247729796 + AluSx SINE Alu 1 282 -30 26 30 0 0 chr2 2958254 2958287 -247729567 + AT_rich Low_complexity Low_complexity 1 33 0 218 213 82 0 chr2 2958856 2958917 -247728937 + MIR SINE MIR 107 172 -90 2016 98 10 49 chr2 2959693 2959999 -247727855 - AluSc SINE Alu -15 294 1 2126 133 0 3 chr2 2960957 2961265 -247726589 - AluSg SINE Alu -3 307 1 234 116 0 0 chr2 2961930 2961973 -247725881 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 80 8 0 chr2 2962000 2962249 -247725605 + AluSp SINE Alu 43 293 -20 255 243 0 43 chr2 2962580 2962650 -247725204 + MIR3 SINE MIR 126 192 -16 406 315 118 0 chr2 2963111 2963314 -247724540 - MIR SINE MIR -28 234 8 794 192 83 33 chr2 2963478 2963718 -247724136 + Charlie5 DNA MER1_type 2334 2585 -27 449 253 59 24 chr2 2965669 2965839 -247722015 + MER5B DNA MER1_type 3 178 0 247 271 52 84 chr2 2969950 2970105 -247717749 + L3 LINE CR1 1426 1575 -2 978 107 0 0 chr2 2970511 2970688 -247717166 + (GA)n Simple_repeat Simple_repeat 2 178 0 637 159 0 12 chr2 2970689 2970859 -247716995 + GA-rich Low_complexity Low_complexity 2 169 0 236 240 10 0 chr2 2970875 2970975 -247716879 + GA-rich Low_complexity Low_complexity 2 102 0 2323 97 0 3 chr2 2973827 2974135 -247713719 - AluSc SINE Alu -2 307 1 218 266 16 0 chr2 2976177 2976259 -247711595 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 185 304 38 0 chr2 2976390 2976469 -247711385 - L2 LINE L2 -7 3306 3225 21 0 0 0 chr2 2976509 2976530 -247711324 + AT_rich Low_complexity Low_complexity 1 21 0 1860 144 29 13 chr2 2976531 2976837 -247711017 + AluJo SINE Alu 1 311 -1 451 248 57 0 chr2 2979651 2979756 -247708098 - MER58A DNA MER1_type 0 114 4 711 173 74 20 chr2 2979876 2980078 -247707776 + MER33 DNA MER1_type 21 233 -91 1758 148 184 11 chr2 2980552 2980917 -247706937 - MSTA LTR MaLR 0 428 1 313 226 22 50 chr2 2982920 2983101 -247704753 + (CACTA)n Simple_repeat Simple_repeat 4 179 0 215 277 0 58 chr2 2983077 2983265 -247704589 + (CACTC)n Simple_repeat Simple_repeat 2 178 0 * 240 284 0 62 chr2 2983174 2983350 -247704504 + (CACTT)n Simple_repeat Simple_repeat 3 167 0 * 302 224 18 64 chr2 2983233 2983810 -247704044 + (CACTA)n Simple_repeat Simple_repeat 1 550 0 215 283 6 50 chr2 2984063 2984222 -247703632 + (CACTC)n Simple_repeat Simple_repeat 2 153 0 279 227 0 57 chr2 2984222 2984398 -247703456 + (CTATA)n Simple_repeat Simple_repeat 1 166 0 329 230 0 73 chr2 2984492 2984683 -247703171 + (CTACT)n Simple_repeat Simple_repeat 3 179 0 276 245 0 58 chr2 2984823 2985011 -247702843 + (CTATA)n Simple_repeat Simple_repeat 1 177 0 205 274 0 60 chr2 2985072 2985240 -247702614 + (CTTTA)n Simple_repeat Simple_repeat 5 162 0 394 218 0 52 chr2 2985292 2985466 -247702388 + (CACTA)n Simple_repeat Simple_repeat 3 167 0 1732 167 0 7 chr2 2987312 2987587 -247700267 + AluJb SINE Alu 1 273 -39 180 0 0 0 chr2 2989535 2989555 -247698299 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1067 117 0 0 chr2 2989555 2989700 -247698154 - L1PA10 LINE L1 -19 6149 6005 2253 131 0 0 chr2 2989700 2990035 -247697819 + L1P LINE L1 4681 5015 -1131 2086 133 0 22 chr2 2991784 2992100 -247695754 - AluY SINE Alu -2 309 1 26 74 0 0 chr2 2992573 2992627 -247695227 + AT_rich Low_complexity Low_complexity 1 54 0 192 77 0 0 chr2 2994736 2994762 -247693092 + (TA)n Simple_repeat Simple_repeat 2 27 0 277 301 18 9 chr2 3001850 3001963 -247685891 + GA-rich Low_complexity Low_complexity 1 114 0 24 0 0 0 chr2 3002804 3002828 -247685026 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 3003303 3003325 -247684529 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr2 3006693 3006729 -247681125 + (CA)n Simple_repeat Simple_repeat 2 37 0 302 138 17 0 chr2 3007246 3007304 -247680550 + (TG)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 3008205 3008229 -247679625 + (TC)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 3008231 3008256 -247679598 + (CA)n Simple_repeat Simple_repeat 1 25 0 226 244 0 0 chr2 3008704 3008749 -247679105 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 192 97 0 0 chr2 3009640 3009671 -247678183 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1501 153 91 28 chr2 3010775 3011062 -247676792 + MER1B DNA MER1_type 35 339 0 26 0 0 0 chr2 3011422 3011448 -247676406 + AT_rich Low_complexity Low_complexity 1 26 0 248 375 0 0 chr2 3011800 3011888 -247675966 + LTR67 LTR ERVL 108 195 -362 753 209 0 0 chr2 3012775 3012909 -247674945 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 3012910 3013312 -247674542 + L1PA4 LINE L1 5752 6153 -2 753 209 0 0 chr2 3013823 3013957 -247673897 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 3013958 3014360 -247673494 + L1PA4 LINE L1 5752 6153 -2 536 34 11 67 chr2 3014439 3014528 -247673326 - L1PA3 LINE L1 -3 6152 6069 281 258 50 17 chr2 3016001 3016121 -247671733 + LTR67 LTR ERVL 434 557 0 306 256 202 8 chr2 3016724 3016853 -247671001 + MER5A DNA MER1_type 36 189 0 607 225 144 32 chr2 3016861 3017024 -247670830 - MER33 DNA MER1_type -2261 324 181 2209 104 3 0 chr2 3017024 3017321 -247670533 - AluSp SINE Alu -15 298 1 2118 122 3 0 chr2 3017321 3017609 -247670245 - AluSg SINE Alu -21 289 1 607 225 144 32 chr2 3017609 3017728 -247670126 - MER33 DNA MER1_type -2403 182 9 296 245 157 20 chr2 3018701 3018803 -247669051 - MIR3 SINE MIR -6 202 87 340 173 0 19 chr2 3018808 3018912 -247668942 + GA-rich Low_complexity Low_complexity 1 102 0 548 295 50 42 chr2 3021030 3021271 -247666583 + MIR SINE MIR 12 254 -8 1331 230 65 68 chr2 3021986 3022704 -247665150 - L1MC5 LINE L1 -697 7264 6542 2057 134 90 3 chr2 3022721 3023056 -247664798 - THE1B LTR MaLR 0 364 1 306 73 0 0 chr2 3023915 3023956 -247663898 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 3024851 3024873 -247662981 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 3025063 3025120 -247662734 + AT_rich Low_complexity Low_complexity 1 57 0 342 309 26 26 chr2 3027045 3027197 -247660657 - MIR SINE MIR 0 262 111 1740 80 16 0 chr2 3027219 3027569 -247660285 - L1P3 LINE L1 -634 5520 5167 823 30 20 0 chr2 3027571 3027672 -247660182 + L1PA7 LINE L1 6050 6152 -2 25 31 0 0 chr2 3027892 3027924 -247659930 + AT_rich Low_complexity Low_complexity 1 32 0 1049 99 43 0 chr2 3028074 3028215 -247659639 + AluSg/x SINE Alu 154 300 -12 776 256 94 3 chr2 3028758 3029067 -247658787 + L1MD3 LINE L1 7659 7995 0 641 76 11 0 chr2 3029280 3029372 -247658482 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 28 29 0 0 chr2 3029407 3029442 -247658412 + AT_rich Low_complexity Low_complexity 1 35 0 1964 222 0 22 chr2 3030069 3030568 -247657286 + L1PB4 LINE L1 2226 2713 -3433 200 59 29 0 chr2 3030583 3030617 -247657237 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1198 67 6 0 chr2 3030622 3030787 -247657067 - L1PA8A LINE L1 -28 6103 5938 10215 193 29 21 chr2 3030790 3034150 -247653704 + L1PB4 LINE L1 2703 6090 -66 273 172 0 0 chr2 3034202 3034260 -247653594 + L1PB4 LINE L1 6097 6154 -2 256 219 14 14 chr2 3034670 3034743 -247653111 - MLT2E LTR ERVL -525 103 31 616 277 27 31 chr2 3035439 3035663 -247652191 - MIR SINE MIR 0 262 40 3298 183 110 97 chr2 3035787 3036314 -247651540 - L1MC3 LINE L1 -60 7725 7206 248 220 30 40 chr2 3036314 3036414 -247651440 - MLT1F1 LTR MaLR -445 122 24 3298 183 110 97 chr2 3036414 3036454 -247651400 - L1MC3 LINE L1 -579 7206 7168 834 247 70 78 chr2 3036454 3036851 -247651003 + MSTD LTR MaLR 1 394 -2 3298 183 110 97 chr2 3036851 3037422 -247650432 - L1MC3 LINE L1 -617 7168 6499 1563 98 0 9 chr2 3038204 3038428 -247649426 - L1PA8 LINE L1 0 6172 5951 670 279 154 27 chr2 3039009 3039708 -247648146 + HAL1 LINE L1 841 1628 -879 239 0 32 0 chr2 3039719 3039750 -247648104 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 768 311 107 36 chr2 3040205 3041010 -247646844 + HAL1 LINE L1 1646 2507 0 296 311 133 0 chr2 3041473 3041624 -247646230 - MLT1E2 LTR MaLR -144 482 312 623 261 39 93 chr2 3043243 3043599 -247644255 - MER46C DNA MER2_type 0 338 2 240 111 0 0 chr2 3043716 3043752 -247644102 + (CA)n Simple_repeat Simple_repeat 1 36 0 291 122 0 0 chr2 3044934 3044983 -247642871 + (TC)n Simple_repeat Simple_repeat 1 49 0 3128 178 85 15 chr2 3045297 3045531 -247642323 - L1MC1 LINE L1 0 6333 6117 2624 91 31 0 chr2 3045531 3045884 -247641970 + THE1B LTR MaLR 1 364 0 3128 178 85 15 chr2 3045884 3046319 -247641535 - L1MC1 LINE L1 -216 6117 5634 16782 83 4 12 chr2 3046888 3048835 -247639019 - L1PA7 LINE L1 0 6154 4250 1729 81 0 136 chr2 3048835 3049145 -247638709 - AluY SINE Alu 0 311 44 16782 83 4 12 chr2 3049145 3050297 -247637557 - L1PA7 LINE L1 -1904 4250 3090 16872 123 14 21 chr2 3050297 3053042 -247634812 - L1P LINE L1 -2823 3323 598 321 326 7 21 chr2 3053392 3053536 -247634318 - MIR SINE MIR -80 182 41 197 307 0 27 chr2 3053794 3053865 -247633989 + L2 LINE L2 2323 2391 -923 277 241 44 95 chr2 3053865 3054023 -247633831 + MER5A DNA MER1_type 1 150 -39 192 320 153 41 chr2 3054048 3054435 -247633419 + L2 LINE L2 2397 2826 -488 590 203 20 43 chr2 3054890 3055043 -247632811 + THE1C LTR MaLR 1 154 -262 9925 120 53 6 chr2 3055043 3056512 -247631342 + THE1C-int LTR MaLR 42 1579 -1 1706 144 88 31 chr2 3056515 3056868 -247630986 + THE1C LTR MaLR 3 375 0 710 280 77 63 chr2 3057765 3058554 -247629300 + L1M4 LINE L1 2972 3771 -2375 2168 169 40 33 chr2 3058586 3059132 -247628722 + MLT2A2 LTR ERVL 2 554 0 326 263 70 18 chr2 3059320 3059434 -247628420 + HAL1 LINE L1 22 141 -2366 381 302 35 12 chr2 3059615 3059787 -247628067 + HAL1 LINE L1 157 332 -2175 800 310 31 59 chr2 3059835 3060571 -247627283 + L2 LINE L2 2594 3310 -3 634 183 48 22 chr2 3060721 3060860 -247626994 - MLT1E1 LTR MaLR -6 637 406 518 364 113 7 chr2 3060947 3061400 -247626454 - L2 LINE L2 -527 2787 2287 186 337 123 16 chr2 3062185 3062372 -247625482 + L2 LINE L2 1876 2082 -1232 2155 89 13 23 chr2 3062425 3062750 -247625104 - AluY SINE Alu 0 322 1 834 300 77 73 chr2 3063095 3063324 -247624530 + L2 LINE L2 2287 2513 -800 3245 66 0 0 chr2 3063324 3063732 -247624122 - L1PA8 LINE L1 0 6172 5765 834 300 77 73 chr2 3063732 3064177 -247623677 + L2 LINE L2 2513 2955 -358 2423 156 46 2 chr2 3064177 3064587 -247623267 - MSTA LTR MaLR 0 428 1 6317 191 84 44 chr2 3064587 3066104 -247621750 - MSTA-int LTR MaLR 0 1580 3 2579 112 34 53 chr2 3066106 3066486 -247621368 - MSTA LTR MaLR 0 428 55 2271 95 0 46 chr2 3066486 3066811 -247621043 - AluSg SINE Alu 0 310 1 2579 112 34 53 chr2 3066811 3066866 -247620988 - MSTA LTR MaLR -373 55 1 834 300 77 73 chr2 3066866 3067189 -247620665 + L2 LINE L2 2955 3313 0 325 320 39 20 chr2 3067516 3067669 -247620185 + MIR3 SINE MIR 27 182 -26 234 297 138 21 chr2 3068685 3068830 -247619024 - L2 LINE L2 0 3272 3111 262 122 0 0 chr2 3069011 3069052 -247618802 + AluSx SINE Alu 1 41 -260 2060 118 0 0 chr2 3069052 3069324 -247618530 + AluSx SINE Alu 19 290 -22 2255 81 0 0 chr2 3069331 3069654 -247618200 + AluY SINE Alu 9 331 0 1618 150 4 33 chr2 3070281 3070555 -247617299 + AluJo SINE Alu 38 303 -9 1191 209 41 55 chr2 3070587 3070948 -247616906 + MSTB2 LTR MaLR 41 457 0 231 333 0 0 chr2 3072493 3072559 -247615295 - L1MCc LINE L1 -3407 3534 3469 1412 208 19 55 chr2 3072590 3072975 -247614879 - MLT1A2 LTR MaLR -2 465 1 1188 253 65 46 chr2 3073073 3073795 -247614059 - L1MCc LINE L1 -4891 1532 1184 2323 108 0 0 chr2 3073869 3074165 -247613689 - AluSx SINE Alu -16 296 1 239 322 43 9 chr2 3074211 3074326 -247613528 + L1P LINE L1 4099 4217 -1929 22 0 0 0 chr2 3076268 3076290 -247611564 + AT_rich Low_complexity Low_complexity 1 22 0 2289 106 140 11 chr2 3078040 3078419 -247609435 - MSTA LTR MaLR 0 428 1 194 298 113 32 chr2 3079432 3079556 -247608298 + L2 LINE L2 3139 3272 0 653 305 64 54 chr2 3079594 3080017 -247607837 - L2 LINE L2 -2 3311 2885 291 289 33 0 chr2 3080319 3080440 -247607414 + L1ME4a LINE L1 5769 5893 -228 376 332 88 45 chr2 3081366 3081854 -247606000 + HAL1 LINE L1 597 1105 -1402 423 304 175 31 chr2 3081925 3082532 -247605322 + HAL1 LINE L1 1450 2193 -314 1550 193 116 30 chr2 3082532 3082962 -247604892 + MLT1C LTR MaLR 1 467 0 423 304 175 31 chr2 3082962 3083124 -247604730 + HAL1 LINE L1 2193 2330 -177 313 285 39 31 chr2 3083230 3083360 -247604494 - MIR SINE MIR -34 228 98 1231 151 130 50 chr2 3083364 3083663 -247604191 - L1MA6 LINE L1 -366 5934 5612 182 317 17 0 chr2 3083663 3083723 -247604131 - MIR SINE MIR -188 74 14 180 179 0 0 chr2 3083887 3083926 -247603928 + (TG)n Simple_repeat Simple_repeat 1 39 0 264 122 0 0 chr2 3083978 3084019 -247603835 - MADE1 DNA Mariner -39 41 1 910 288 137 24 chr2 3084067 3084650 -247603204 + L1ME3A LINE L1 5522 6170 0 1311 155 132 78 chr2 3084724 3085020 -247602834 + AluJb SINE Alu 1 312 0 326 188 24 47 chr2 3085292 3085377 -247602477 + L1MA4 LINE L1 6211 6293 -7 286 343 10 0 chr2 3087228 3087330 -247600524 - L1MCc LINE L1 -5984 439 337 386 20 0 0 chr2 3088663 3088712 -247599142 - AluY SINE Alu 0 301 253 1144 66 66 0 chr2 3088712 3088864 -247598990 - AluSg/x SINE Alu -20 290 129 2322 95 0 10 chr2 3088882 3089187 -247598667 - AluSx SINE Alu -10 302 1 284 178 27 56 chr2 3089265 3089404 -247598450 + MSR1 Satellite Satellite 1 135 -25 1444 46 0 23 chr2 3089511 3089685 -247598169 - AluY SINE Alu -141 170 1 238 232 18 0 chr2 3089689 3089745 -247598109 + MER3 DNA MER1_type 153 209 0 291 230 0 52 chr2 3090299 3090473 -247597381 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 314 223 0 51 chr2 3090489 3090664 -247597190 + (CCCCAG)n Simple_repeat Simple_repeat 1 166 0 299 236 0 52 chr2 3090717 3090891 -247596963 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 281 119 24 0 chr2 3091033 3091075 -247596779 - AluJ/FLAM SINE Alu -239 63 21 2137 121 0 0 chr2 3091240 3091538 -247596316 + AluSq SINE Alu 1 298 -15 436 262 32 40 chr2 3092239 3092365 -247595489 - MIR3 SINE MIR -70 138 14 226 240 48 67 chr2 3093486 3093590 -247594264 - MSR1 Satellite Satellite 0 111 10 225 303 50 40 chr2 3093612 3093711 -247594143 - MSR1 Satellite Satellite -11 100 1 191 347 53 32 chr2 3094022 3094117 -247593737 + L2 LINE L2 3200 3296 -17 1990 125 3 3 chr2 3095177 3095488 -247592366 - AluJo SINE Alu -1 311 1 2347 59 0 3 chr2 3095795 3096098 -247591756 + AluSq SINE Alu 1 302 -11 1676 73 4 9 chr2 3096100 3096333 -247591521 + AluSg SINE Alu 1 232 -78 540 83 0 0 chr2 3096434 3096506 -247591348 + AluSg SINE Alu 230 301 -9 354 257 115 26 chr2 3096519 3096632 -247591222 - MIR SINE MIR -32 230 108 222 272 71 71 chr2 3096930 3097099 -247590755 + L2 LINE L2 2938 3106 -166 23 62 0 0 chr2 3099061 3099093 -247588761 + GC_rich Low_complexity Low_complexity 1 32 0 581 197 63 0 chr2 3099555 3099682 -247588172 - Charlie1 DNA MER1_type 0 2761 2627 597 237 103 5 chr2 3099684 3099878 -247587976 - Charlie1 DNA MER1_type -2547 214 2 285 98 0 0 chr2 3101856 3101897 -247585957 + (CA)n Simple_repeat Simple_repeat 2 42 0 1450 123 102 0 chr2 3102297 3102388 -247585466 + AluSx SINE Alu 25 105 -207 2012 90 7 0 chr2 3102388 3102665 -247585189 + AluSg SINE Alu 1 279 -31 279 0 0 0 chr2 3102668 3102699 -247585155 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1450 123 102 0 chr2 3102699 3102847 -247585007 + AluSx SINE Alu 106 293 -19 1000 185 158 68 chr2 3102864 3102998 -247584856 + AluJo SINE Alu 1 121 -181 2089 115 3 3 chr2 3102998 3103294 -247584560 + AluSg SINE Alu 1 296 -14 1000 185 158 68 chr2 3103294 3103424 -247584430 + AluJo SINE Alu 121 289 -13 1109 59 0 0 chr2 3103902 3104037 -247583817 + AluSq/x SINE Alu 1 135 -177 1599 134 59 66 chr2 3104037 3104342 -247583512 + AluSx SINE Alu 1 303 -9 2097 91 18 0 chr2 3104344 3104629 -247583225 + AluSq SINE Alu 2 291 -22 1274 138 153 15 chr2 3104648 3104909 -247582945 + AluJo SINE Alu 1 297 -15 347 275 22 11 chr2 3104909 3105000 -247582854 + MIR SINE MIR 59 150 -112 1886 156 0 0 chr2 3105146 3105434 -247582420 + AluJb SINE Alu 1 288 -24 577 248 76 109 chr2 3105547 3105849 -247582005 - L1ME LINE L1 -380 5790 5499 1731 187 74 19 chr2 3105864 3106227 -247581627 - MSTB1 LTR MaLR -6 426 44 3029 56 0 0 chr2 3106227 3106600 -247581254 - L1PA7 LINE L1 0 6154 5782 191 270 95 14 chr2 3106825 3106899 -247580955 - MIR SINE MIR -72 190 111 764 218 98 10 chr2 3107268 3107461 -247580393 - MIR SINE MIR -23 239 30 369 279 165 32 chr2 3107506 3107875 -247579979 - L2 LINE L2 -7 3265 2848 2561 48 0 0 chr2 3109790 3110101 -247577753 - AluY SINE Alu 0 311 1 227 330 50 0 chr2 3110445 3110545 -247577309 + L2 LINE L2 3202 3306 -7 1190 314 66 76 chr2 3112356 3112929 -247574925 - L1M4 LINE L1 -2053 4093 3533 228 111 0 0 chr2 3112929 3112965 -247574889 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1190 314 66 76 chr2 3112965 3113362 -247574492 - L1M4 LINE L1 -2613 3533 3133 22 56 0 0 chr2 3113621 3113657 -247574197 + AT_rich Low_complexity Low_complexity 1 36 0 1040 236 25 22 chr2 3113750 3114068 -247573786 + L1 LINE L1 4304 4622 -1524 319 266 125 80 chr2 3114172 3114352 -247573502 - L1ME LINE L1 -357 5805 5604 1976 106 3 56 chr2 3114352 3114673 -247573181 - AluSg SINE Alu -6 304 1 319 266 125 80 chr2 3114673 3114804 -247573050 - L1ME LINE L1 -558 5604 5480 211 342 13 0 chr2 3115099 3115178 -247572676 + MIR SINE MIR 164 243 -19 22 0 0 0 chr2 3115312 3115334 -247572520 + AT_rich Low_complexity Low_complexity 1 22 0 624 227 51 60 chr2 3116133 3116349 -247571505 + MER20 DNA MER1_type 4 217 -2 433 351 29 40 chr2 3117550 3117929 -247569925 + ERVL LTR ERVL 4945 5319 -445 231 354 0 0 chr2 3118481 3118563 -247569291 + LTR16A LTR ERVL 319 400 -50 495 287 73 67 chr2 3118611 3118939 -247568915 + L1MC/D LINE L1 4039 4368 -1778 270 298 177 6 chr2 3118949 3119107 -247568747 - LTR33 LTR ERVL -8 513 329 429 363 46 31 chr2 3119488 3119813 -247568041 + L1MC/D LINE L1 4507 4836 -1310 719 269 48 35 chr2 3119900 3120127 -247567727 - MIR SINE MIR -7 255 26 25 65 0 0 chr2 3120193 3120239 -247567615 + AT_rich Low_complexity Low_complexity 1 46 0 482 310 25 10 chr2 3120448 3120645 -247567209 + L1MC/D LINE L1 5315 5514 -2294 589 281 45 45 chr2 3120722 3120943 -247566911 + L2 LINE L2 2650 2870 -444 702 245 119 42 chr2 3120971 3121257 -247566597 - L1ME3A LINE L1 -18 6152 5845 1243 191 36 50 chr2 3121861 3122164 -247565690 + AluJo SINE Alu 1 299 -3 5226 30 0 2 chr2 3122561 3123167 -247564687 - L1PA4 LINE L1 -1 6154 5550 1328 111 11 69 chr2 3123277 3123539 -247564315 - L1MA9 LINE L1 0 6312 6066 22 0 0 0 chr2 3123909 3123931 -247563923 + AT_rich Low_complexity Low_complexity 1 22 0 255 330 37 9 chr2 3124084 3124193 -247563661 + MIR SINE MIR 51 162 -100 4403 235 57 35 chr2 3124197 3124420 -247563434 + L1MB8 LINE L1 3722 3939 -2207 207 0 0 0 chr2 3124420 3124443 -247563411 + (TAA)n Simple_repeat Simple_repeat 1 23 0 4403 235 57 35 chr2 3124443 3125706 -247562148 + L1MB8 LINE L1 3939 5240 -906 2018 121 87 98 chr2 3125721 3126159 -247561695 - Tigger2a DNA MER2_type -1 433 1 1956 213 43 20 chr2 3126169 3126676 -247561178 + L1MB8 LINE L1 5293 5811 -367 384 237 34 17 chr2 3126762 3126880 -247560974 + L1MB8 LINE L1 6039 6158 -20 1618 238 8 6 chr2 3126880 3127237 -247560617 + MLT1A1 LTR MaLR 1 358 -7 18974 158 29 69 chr2 3127366 3127743 -247560111 - L1 LINE L1 -3789 3776 3386 189 94 0 0 chr2 3127743 3127775 -247560079 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 18974 158 29 69 chr2 3127775 3128791 -247559063 - L1 LINE L1 -4179 3386 2331 1895 116 25 3 chr2 3128791 3129075 -247558779 + AluSq SINE Alu 1 290 -23 18974 158 29 69 chr2 3129075 3130583 -247557271 - L1 LINE L1 -5234 2331 849 1422 127 19 0 chr2 3130583 3130796 -247557058 + AluSp SINE Alu 89 305 -8 18974 158 29 69 chr2 3130796 3131601 -247556253 - L1 LINE L1 -6716 849 13 777 333 59 100 chr2 3131602 3132411 -247555443 + L1ME3A LINE L1 5394 6169 -1 1101 304 127 22 chr2 3132698 3133484 -247554370 - L2 LINE L2 -665 2649 1781 217 213 21 0 chr2 3133511 3133558 -247554296 + L2 LINE L2 3266 3313 0 1135 175 0 0 chr2 3134253 3134459 -247553395 - AluJb SINE Alu -1 311 106 693 316 98 31 chr2 3134469 3134827 -247553027 + L1ME LINE L1 3369 3750 -2396 37 81 0 0 chr2 3134891 3134977 -247552877 + AT_rich Low_complexity Low_complexity 1 86 0 404 212 16 43 chr2 3135155 3135339 -247552515 + (TA)n Simple_repeat Simple_repeat 2 180 0 1846 261 97 56 chr2 3135358 3135947 -247551907 + L1ME LINE L1 3883 4446 -1700 2228 111 45 31 chr2 3135947 3136306 -247551548 - THE1B LTR MaLR 0 364 1 1846 261 97 56 chr2 3136306 3137153 -247550701 + L1ME LINE L1 4446 5378 -768 328 311 141 32 chr2 3137287 3137564 -247550290 + L1ME LINE L1 2133 2439 -3707 454 279 0 16 chr2 3137564 3137686 -247550168 + L1ME LINE L1 5640 5759 -411 905 257 117 18 chr2 3137907 3138249 -247549605 + L1ME LINE L1 5410 5785 -385 340 206 118 20 chr2 3138578 3138680 -247549174 - HAL1 LINE L1 -1423 1084 973 1384 31 12 0 chr2 3139264 3139426 -247548428 + L1PA5 LINE L1 5984 6147 -7 234 62 0 0 chr2 3140029 3140061 -247547793 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 42 0 0 chr2 3140308 3140332 -247547522 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 2133 118 0 17 chr2 3140683 3141044 -247546810 + AluSx SINE Alu 1 356 0 1614 205 69 40 chr2 3141178 3141627 -247546227 - MLT1C LTR MaLR -2 465 4 192 320 13 27 chr2 3142232 3142307 -247545547 - L2 LINE L2 -6 3307 3234 356 319 108 55 chr2 3142707 3143400 -247544454 - L1M4 LINE L1 -3218 2928 2199 4339 189 23 51 chr2 3144104 3144977 -247542877 + L1MA9 LINE L1 4940 5771 -541 270 0 0 0 chr2 3144977 3145007 -247542847 + (CA)n Simple_repeat Simple_repeat 1 30 0 4339 189 23 51 chr2 3145007 3145498 -247542356 + L1MA9 LINE L1 5771 6274 -38 428 289 62 57 chr2 3145872 3146242 -247541612 + LTR16A LTR ERVL 74 445 -5 647 320 42 14 chr2 3146248 3146532 -247541322 + HERV16 LTR ERVL 2 293 -4703 980 212 45 37 chr2 3146667 3146936 -247540918 - MLT1D LTR MaLR 0 505 235 572 324 52 0 chr2 3147103 3147316 -247540538 + HERV16 LTR ERVL 457 680 -4316 1769 312 64 18 chr2 3147420 3148691 -247539163 + HERV16 LTR ERVL 869 2293 -3072 396 0 0 0 chr2 3148691 3148735 -247539119 + (TA)n Simple_repeat Simple_repeat 2 45 0 1769 312 64 18 chr2 3148735 3148910 -247538944 + HERV16 LTR ERVL 2293 2458 -2907 618 142 9 9 chr2 3149010 3149116 -247538738 - MSTC LTR MaLR 0 428 323 12668 107 5 1 chr2 3149225 3150984 -247536870 - L1P3 LINE L1 -4676 1775 28 353 159 52 36 chr2 3150984 3151071 -247536783 - MSTB2 LTR MaLR -352 80 1 4444 210 50 1 chr2 3152163 3153143 -247534711 + L1MCa LINE L1 139 1166 -5260 3827 218 24 47 chr2 3153144 3153725 -247534129 + L1MB8 LINE L1 4597 5189 -989 330 24 0 0 chr2 3153725 3153766 -247534088 + L1PA4 LINE L1 6112 6152 -3 3827 218 24 47 chr2 3153766 3154703 -247533151 + L1MB8 LINE L1 5189 6011 -167 2216 78 0 0 chr2 3154703 3154971 -247532883 + AluY SINE Alu 29 296 -15 3827 218 24 47 chr2 3154971 3155121 -247532733 + L1MB8 LINE L1 6011 6163 -15 295 277 97 52 chr2 3155911 3156178 -247531676 - L2 LINE L2 -13 3300 3022 230 217 0 0 chr2 3156599 3156645 -247531209 + MER103 DNA DNA 9 54 -112 28 0 0 0 chr2 3156942 3156970 -247530884 + AT_rich Low_complexity Low_complexity 1 28 0 5222 0 81 0 chr2 3158059 3158302 -247529552 + L1MC2 LINE L1 5106 5325 -1019 5222 131 46 7 chr2 3158302 3159144 -247528710 + L1MC2 LINE L1 5461 6335 -9 5222 0 81 0 chr2 3159144 3159179 -247528675 + L1MC2 LINE L1 5325 6335 -9 435 342 89 3 chr2 3160666 3160982 -247526872 + HERV16 LTR ERVL 2844 3186 -2578 1186 311 69 56 chr2 3161505 3162423 -247525431 + ERVL LTR ERVL 4474 5403 -361 288 289 0 0 chr2 3162429 3162505 -247525349 + L1MC4 LINE L1 6628 6703 -1339 246 271 38 128 chr2 3163487 3163620 -247524234 + L2 LINE L2 3150 3270 -2 215 305 118 37 chr2 3163617 3163804 -247524050 + L2 LINE L2 2183 2384 -930 * 286 311 91 58 chr2 3164277 3164752 -247523102 + L2 LINE L2 2593 3084 -188 265 313 45 36 chr2 3166115 3166227 -247521627 - L2 LINE L2 -19 3253 3141 302 308 0 0 chr2 3166491 3166595 -247521259 + (CA)n Simple_repeat Simple_repeat 1 104 0 187 338 23 45 chr2 3167028 3167161 -247520693 - L2 LINE L2 -5 3267 3138 237 334 88 50 chr2 3167262 3167879 -247519975 - L2 LINE L2 -191 3081 2444 472 292 45 14 chr2 3167884 3168139 -247519715 + L1ME LINE L1 5329 5588 -574 241 258 34 45 chr2 3168398 3168487 -247519367 + L2 LINE L2 3172 3259 -54 198 71 0 0 chr2 3168505 3168533 -247519321 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 2596 116 28 0 chr2 3169770 3170124 -247517730 + THE1B LTR MaLR 1 364 0 265 293 123 0 chr2 3172322 3172428 -247515426 + L2 LINE L2 3185 3303 -10 1310 162 33 114 chr2 3172791 3173125 -247514729 - AluYb8 SINE Alu -9 309 3 782 158 7 34 chr2 3174979 3175125 -247512729 + L1PB4 LINE L1 6013 6154 -2 4005 256 81 36 chr2 3175153 3175724 -247512130 - L1ME LINE L1 -452 5648 5104 2242 127 0 0 chr2 3175724 3176032 -247511822 - AluSg SINE Alu -2 308 1 4005 256 81 36 chr2 3176032 3177756 -247510098 - L1ME LINE L1 -996 5104 3237 291 286 112 0 chr2 3177945 3178043 -247509811 - MER58 DNA MER1_type -93 122 14 362 291 82 43 chr2 3178078 3178494 -247509360 - L1ME LINE L1 -4137 2124 1693 26 98 0 0 chr2 3178499 3178581 -247509273 + AT_rich Low_complexity Low_complexity 1 82 0 1166 287 84 49 chr2 3178590 3179809 -247508045 - L1ME LINE L1 -4582 1679 378 228 135 0 0 chr2 3180079 3180116 -247507738 + (T)n Simple_repeat Simple_repeat 1 37 0 339 324 7 35 chr2 3180675 3180817 -247507037 - MER5A DNA MER1_type -22 167 30 282 247 74 0 chr2 3182313 3182394 -247505460 - L2 LINE L2 -7 3306 3220 333 0 0 0 chr2 3183560 3183597 -247504257 + (TG)n Simple_repeat Simple_repeat 1 37 0 2193 114 0 7 chr2 3184245 3184551 -247503303 - AluSx SINE Alu -8 304 1 1475 286 97 22 chr2 3184985 3186481 -247501373 - L1ME3A LINE L1 -5 6165 4782 2140 113 0 17 chr2 3186481 3186811 -247501043 - AluSx SINE Alu 0 312 1 3398 165 16 40 chr2 3186820 3187486 -247500368 - L1MA8 LINE L1 -17 6274 5625 1475 286 97 22 chr2 3187486 3187624 -247500230 - L1ME3A LINE L1 -1395 4775 4316 773 134 9 0 chr2 3188630 3188742 -247499112 - THE1B LTR MaLR -188 176 64 2640 107 3 0 chr2 3189584 3189947 -247497907 - THE1B LTR MaLR 0 364 1 197 286 29 14 chr2 3190848 3190918 -247496936 + MIR SINE MIR 21 91 -117 232 325 70 38 chr2 3191172 3191329 -247496525 + MIR SINE MIR 82 243 -19 324 264 8 32 chr2 3191461 3191586 -247496268 + (TATATG)n Simple_repeat Simple_repeat 4 125 0 1292 200 50 126 chr2 3191946 3192207 -247495647 + MLT2B1 LTR ERVL 1 280 -134 239 0 0 31 chr2 3192207 3192239 -247495615 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 1292 200 50 126 chr2 3192239 3192330 -247495524 + MLT2B1 LTR ERVL 280 192 -222 518 15 0 29 chr2 3192330 3192398 -247495456 + (TTTTC)n Simple_repeat Simple_repeat 2 67 0 1292 200 50 126 chr2 3192398 3192603 -247495251 + MLT2B1 LTR ERVL 191 410 -4 23 0 0 29 chr2 3193070 3193090 -247494764 + AT_rich Low_complexity Low_complexity 1 21 -12 1768 155 0 0 chr2 3193090 3193374 -247494480 - AluSg SINE Alu -26 284 1 23 0 0 29 chr2 3193374 3193387 -247494467 + AT_rich Low_complexity Low_complexity 21 33 0 207 69 0 0 chr2 3194218 3194247 -247493607 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 259 367 33 39 chr2 3194931 3195111 -247492743 - L2 LINE L2 0 3272 3094 2229 132 21 34 chr2 3196814 3197194 -247490660 + THE1C LTR MaLR 1 375 0 444 243 33 72 chr2 3197264 3197370 -247490484 - MLT1C LTR MaLR 0 467 358 2500 111 8 3 chr2 3197370 3197723 -247490131 - THE1A LTR MaLR 0 355 1 11399 106 9 5 chr2 3197723 3199297 -247488557 - THE1A-int LTR MaLR 0 1580 1 2580 94 8 3 chr2 3199299 3199650 -247488204 - THE1A LTR MaLR -2 353 1 444 243 33 72 chr2 3199650 3199691 -247488163 - MLT1C LTR MaLR -109 358 322 * 591 162 19 8 chr2 3199686 3199807 -247488047 - MLT1C LTR MaLR -252 138 16 427 213 44 46 chr2 3199981 3200120 -247487734 + L1ME3 LINE L1 6028 6162 0 202 351 57 53 chr2 3200335 3200600 -247487254 - L2 LINE L2 -1 3271 3006 483 221 0 0 chr2 3200686 3200813 -247487041 + (TG)n Simple_repeat Simple_repeat 2 128 0 204 217 67 33 chr2 3202155 3202215 -247485639 - MIR SINE MIR -78 184 123 2305 92 0 0 chr2 3203654 3203959 -247483895 - AluY SINE Alu -6 305 1 2348 113 158 0 chr2 3205223 3205654 -247482200 - LTR19A LTR ERV1 -4 482 1 224 209 75 45 chr2 3207498 3207565 -247480289 - L3 LINE CR1 -123 1454 1386 * 509 286 91 0 chr2 3207553 3207728 -247480126 + MIR SINE MIR 72 262 0 243 237 21 72 chr2 3207758 3207855 -247479999 - L3 LINE CR1 -205 1372 1281 2372 208 19 21 chr2 3207975 3208443 -247479411 - MLT2B1 LTR ERVL -2 518 52 1994 173 59 50 chr2 3208443 3208864 -247478990 - MSTB1 LTR MaLR -2 430 6 255 146 0 0 chr2 3208860 3208901 -247478953 - MLT2B1 LTR ERVL -456 59 19 * 220 312 117 85 chr2 3208906 3209342 -247478512 + L2 LINE L2 1563 2012 -1302 573 252 15 7 chr2 3209396 3209531 -247478323 - MLT1B LTR MaLR 0 390 255 587 322 150 38 chr2 3209992 3210385 -247477469 - L2 LINE L2 -444 2870 2522 1342 243 32 42 chr2 3210385 3210785 -247477069 + MSTD LTR MaLR 1 396 0 587 322 150 38 chr2 3210785 3211435 -247476419 - L2 LINE L2 -792 2522 1710 478 300 19 6 chr2 3211573 3211733 -247476121 + LTR16A LTR ERVL 105 266 -184 180 356 17 69 chr2 3212674 3212848 -247475006 + L2 LINE L2 3149 3313 0 1921 99 11 0 chr2 3214031 3214294 -247473560 - AluSx SINE Alu -5 307 42 201 243 0 0 chr2 3214465 3214502 -247473352 + MIR3 SINE MIR 120 156 -52 254 265 166 13 chr2 3215824 3215929 -247471925 - MIR SINE MIR -46 162 46 182 318 12 24 chr2 3217037 3217122 -247470732 + MIR SINE MIR 63 146 -116 214 282 130 92 chr2 3217812 3217943 -247469911 + MIR SINE MIR 53 188 -74 293 284 23 23 chr2 3219006 3219094 -247468760 + MER5A DNA MER1_type 22 109 -80 225 228 51 165 chr2 3220037 3220195 -247467659 + MIR SINE MIR 80 219 -43 201 196 0 0 chr2 3220472 3220518 -247467336 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 473 250 0 12 chr2 3220571 3220739 -247467115 + (TCCA)n Simple_repeat Simple_repeat 2 167 0 662 211 6 0 chr2 3220770 3220945 -247466909 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 610 248 8 0 chr2 3220994 3221263 -247466591 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 314 304 26 26 chr2 3221333 3221448 -247466406 + MIR3 SINE MIR 94 208 0 462 271 65 7 chr2 3221690 3221845 -247466009 - MIR SINE MIR -60 202 39 23 33 0 0 chr2 3222316 3222346 -247465508 + AT_rich Low_complexity Low_complexity 1 30 0 203 185 0 19 chr2 3222470 3222524 -247465330 + (CA)n Simple_repeat Simple_repeat 1 53 0 270 160 0 0 chr2 3222980 3223030 -247464824 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 312 75 45 chr2 3225314 3225622 -247462232 + L2 LINE L2 1891 2207 -1107 293 358 8 8 chr2 3225942 3226065 -247461789 - MIR SINE MIR -67 141 19 1257 157 138 46 chr2 3229952 3230213 -247457641 - AluJb SINE Alu -25 287 3 2566 111 6 3 chr2 3230672 3231034 -247456820 + THE1B LTR MaLR 2 364 0 229 237 37 89 chr2 3231324 3231459 -247456395 + L1ME LINE L1 5618 5745 -376 358 311 94 32 chr2 3231719 3231996 -247455858 - L1ME LINE L1 -345 5776 5483 2484 242 41 28 chr2 3232110 3232816 -247455038 - L1ME1 LINE L1 -4 6162 5448 1957 123 3 3 chr2 3233392 3233701 -247454153 - AluSx SINE Alu 0 309 1 260 327 109 25 chr2 3234828 3235030 -247452824 - L3 LINE CR1 -348 1229 1011 192 40 0 0 chr2 3235624 3235649 -247452205 + (TCTG)n Simple_repeat Simple_repeat 3 27 0 180 0 0 0 chr2 3235672 3235692 -247452162 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 216 0 0 0 chr2 3235786 3235810 -247452044 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 460 296 24 18 chr2 3236581 3236750 -247451104 + MER5A DNA MER1_type 8 177 -12 234 253 13 25 chr2 3237139 3237218 -247450636 + MER94 DNA DNA 1 78 -56 333 299 16 16 chr2 3237411 3237538 -247450316 + MER94 DNA DNA 1 127 -7 202 274 0 20 chr2 3239102 3239153 -247448701 + GA-rich Low_complexity Low_complexity 2 51 0 459 287 39 60 chr2 3240631 3240913 -247446941 - MLT1J LTR MaLR -235 276 1 188 267 50 0 chr2 3241169 3241229 -247446625 + MIR SINE MIR 53 115 -147 233 146 0 0 chr2 3241524 3241565 -247446289 - MSTB LTR MaLR 0 426 386 2097 76 8 0 chr2 3241567 3241830 -247446024 + AluSq SINE Alu 33 297 -16 321 305 195 0 chr2 3242686 3242804 -247445050 - MER5A DNA MER1_type -3 186 46 678 246 66 6 chr2 3242828 3243011 -247444843 + MER58C DNA MER1_type 21 214 -1 2344 97 3 0 chr2 3243142 3243265 -247444589 + AluSp SINE Alu 1 122 -191 577 0 27 0 chr2 3243265 3243338 -247444516 + (TAAAA)n Simple_repeat Simple_repeat 2 76 0 2344 97 3 0 chr2 3243338 3243513 -247444341 + AluSp SINE Alu 122 300 -13 271 183 29 19 chr2 3243616 3243720 -247444134 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 221 94 47 47 chr2 3243790 3243854 -247444000 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 1099 264 72 14 chr2 3243889 3244305 -247443549 - MER92C LTR ERV1 -8 546 107 289 296 173 37 chr2 3245980 3246142 -247441712 + MER5A DNA MER1_type 4 187 -2 180 274 65 48 chr2 3246844 3246906 -247440948 + MIR3 SINE MIR 107 169 -39 181 256 0 23 chr2 3247244 3247287 -247440567 + L2 LINE L2 3263 3304 -9 1429 178 71 32 chr2 3247474 3247853 -247440001 - Tigger2 DNA MER2_type 0 2718 4 2185 152 33 31 chr2 3247905 3248454 -247439400 - MLT2A2 LTR ERVL 0 554 1 249 98 0 0 chr2 3248844 3248885 -247438969 + (GCTG)n Simple_repeat Simple_repeat 4 44 0 323 319 17 9 chr2 3248948 3249064 -247438790 + MIR SINE MIR 82 198 -64 183 156 0 0 chr2 3250324 3250356 -247437498 + (ATGGTG)n Simple_repeat Simple_repeat 6 37 0 2068 116 141 0 chr2 3250536 3250906 -247436948 - MSTA LTR MaLR 0 428 7 8623 170 37 8 chr2 3250912 3252502 -247435352 - MSTA-int LTR MaLR -14 1637 1 2200 158 94 5 chr2 3252502 3252895 -247434959 - MSTA LTR MaLR 0 428 1 317 333 52 82 chr2 3252895 3253162 -247434692 - L1MEd LINE L1 -4097 2213 1955 5858 138 1 2 chr2 3253172 3254306 -247433548 + L1PA13 LINE L1 5024 6163 0 522 306 113 63 chr2 3254453 3255181 -247432673 - L1MEd LINE L1 -795 1695 928 37 62 0 0 chr2 3255181 3255246 -247432608 + AT_rich Low_complexity Low_complexity 1 65 0 1001 171 57 5 chr2 3255261 3255409 -247432445 - L1MA9 LINE L1 0 6312 6148 294 29 0 0 chr2 3255409 3255444 -247432410 + (TG)n Simple_repeat Simple_repeat 2 36 0 1001 171 57 5 chr2 3255444 3255505 -247432349 - L1MA9 LINE L1 -164 6148 6092 657 209 36 0 chr2 3255515 3255654 -247432200 - FRAM SINE Alu -32 144 1 2306 167 48 74 chr2 3255655 3256215 -247431639 - L1MA9 LINE L1 -201 6111 5567 306 301 195 16 chr2 3256220 3256466 -247431388 - L1MEd LINE L1 -5233 886 597 664 266 112 33 chr2 3257582 3257743 -247430111 - MLT1C LTR MaLR 0 467 320 1260 225 63 42 chr2 3257743 3258121 -247429733 + MLT1B LTR MaLR 5 390 0 664 266 112 33 chr2 3258121 3258364 -247429490 - MLT1C LTR MaLR -147 320 22 203 337 20 41 chr2 3258588 3258686 -247429168 + MIR3 SINE MIR 105 200 -8 193 290 32 32 chr2 3258914 3258976 -247428878 + L2 LINE L2 3232 3293 -20 641 261 78 78 chr2 3260045 3260428 -247427426 + MLT1C LTR MaLR 1 383 -84 325 336 38 0 chr2 3260689 3260820 -247427034 + MIR SINE MIR 118 253 -9 185 324 29 10 chr2 3260936 3261038 -247426816 - MIR SINE MIR -131 131 28 2247 110 10 10 chr2 3261346 3261656 -247426198 - AluSp SINE Alu -3 310 1 227 260 0 60 chr2 3262260 3262360 -247425494 + (CAGG)n Simple_repeat Simple_repeat 3 96 0 354 281 0 62 chr2 3262380 3262558 -247425296 + (CAGG)n Simple_repeat Simple_repeat 2 168 0 441 182 13 7 chr2 3263976 3264130 -247423724 + (CA)n Simple_repeat Simple_repeat 1 155 0 1052 247 115 20 chr2 3264161 3264517 -247423337 + MLT1B LTR MaLR 1 390 0 206 242 15 30 chr2 3265494 3265560 -247422294 + MIR SINE MIR 86 150 -58 197 208 0 130 chr2 3265561 3265638 -247422216 + MER5A DNA MER1_type 33 99 -90 296 333 199 20 chr2 3267094 3267497 -247420357 - L2 LINE L2 -13 3300 2826 252 258 32 11 chr2 3270676 3270769 -247417085 + C-rich Low_complexity Low_complexity 5 99 0 464 79 87 24 chr2 3271300 3271794 -247416060 + (CA)n Simple_repeat Simple_repeat 1 524 0 386 186 48 9 chr2 3271818 3272286 -247415568 + (CA)n Simple_repeat Simple_repeat 1 486 0 253 197 45 0 chr2 3272300 3272366 -247415488 + (CA)n Simple_repeat Simple_repeat 2 70 0 416 143 65 0 chr2 3272385 3272539 -247415315 + (CA)n Simple_repeat Simple_repeat 1 164 0 426 148 63 56 chr2 3272581 3273198 -247414656 + (ATGGTG)n Simple_repeat Simple_repeat 1 621 0 318 185 0 0 chr2 3274420 3274474 -247413380 - MER63 DNA MER1_type -24 1037 984 * 522 175 167 0 chr2 3274472 3274586 -247413268 - MER63 DNA MER1_type -302 760 2 240 281 89 44 chr2 3275193 3275328 -247412526 + L2 LINE L2 3132 3272 0 267 140 0 0 chr2 3275472 3275522 -247412332 + (GGGGA)n Simple_repeat Simple_repeat 2 51 0 261 0 0 0 chr2 3275771 3275800 -247412054 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr2 3276986 3277014 -247410840 + AT_rich Low_complexity Low_complexity 1 28 0 222 347 0 0 chr2 3277023 3277095 -247410759 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 697 248 72 33 chr2 3277265 3277572 -247410282 + L1MD2 LINE L1 4965 5283 -863 * 968 285 94 79 chr2 3277570 3277964 -247409890 + L1MD2 LINE L1 5560 5946 -413 2535 87 0 3 chr2 3277964 3278275 -247409579 - AluSx SINE Alu -2 310 1 968 285 94 79 chr2 3278275 3278655 -247409199 + L1MD2 LINE L1 5946 6346 -13 297 255 131 41 chr2 3280946 3281091 -247406763 - MER5B DNA MER1_type -18 160 3 263 259 108 86 chr2 3281113 3281252 -247406602 - MIR SINE MIR -112 150 9 1693 160 10 7 chr2 3282225 3282518 -247405336 + MER49 LTR ERV1 1 294 -629 6660 91 11 0 chr2 3282577 3283687 -247404167 + L1PA10 LINE L1 5046 6164 -4 1373 204 36 24 chr2 3283700 3284033 -247403821 + MER4D LTR ERV1 567 903 0 187 28 56 28 chr2 3285251 3285287 -247402567 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 281 290 133 10 chr2 3285491 3285614 -247402240 - MER5A DNA MER1_type -10 179 27 218 311 125 25 chr2 3285650 3285875 -247401979 + MIR SINE MIR 8 262 0 237 33 0 0 chr2 3286200 3286230 -247401624 + (TG)n Simple_repeat Simple_repeat 2 31 0 1889 181 0 7 chr2 3286452 3286756 -247401098 + AluJb SINE Alu 1 302 -10 230 71 0 0 chr2 3287610 3287638 -247400216 + LTR47A LTR ERVL 4 31 -421 1980 161 130 3 chr2 3287638 3288022 -247399832 + LTR47A LTR ERVL 4 436 -16 18749 168 60 13 chr2 3289330 3293110 -247394744 + L1M1 LINE L1 19 3619 -4105 1011 23 0 38 chr2 3293110 3293241 -247394613 - L1PA6 LINE L1 -7 6147 6022 18749 168 60 13 chr2 3293241 3294167 -247393687 + L1M1 LINE L1 3619 4500 -3224 2171 118 3 0 chr2 3294167 3294473 -247393381 + AluSq SINE Alu 1 307 -6 18749 168 60 13 chr2 3294473 3296420 -247391434 + L1M1 LINE L1 4500 6983 -741 445 241 19 86 chr2 3296443 3296550 -247391304 + MLT1F1 LTR MaLR 407 502 -65 2206 92 0 0 chr2 3296550 3296859 -247390995 - AluSg SINE Alu 0 309 1 445 241 19 86 chr2 3296859 3296912 -247390942 + MLT1F1 LTR MaLR 502 557 -10 353 275 84 41 chr2 3296935 3297156 -247390698 + MIR SINE MIR 20 249 -13 452 335 180 12 chr2 3297786 3298108 -247389746 + L3 LINE CR1 1114 1489 -88 297 310 90 21 chr2 3299752 3299897 -247387957 - MIR SINE MIR -52 210 56 665 256 61 22 chr2 3299930 3300110 -247387744 - MER5A DNA MER1_type -2 187 1 228 86 0 0 chr2 3300652 3300687 -247387167 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1783 195 14 24 chr2 3301525 3301895 -247385959 - MER47A DNA MER2_type 0 366 1 1492 151 3 56 chr2 3301902 3302034 -247385820 + MER2 DNA MER2_type 2 113 -232 1320 199 34 21 chr2 3302034 3302325 -247385529 - AluJb SINE Alu -17 295 1 1492 151 3 56 chr2 3302325 3302476 -247385378 + MER2 DNA MER2_type 113 270 -75 641 327 154 34 chr2 3302591 3303692 -247384162 + L2 LINE L2 1744 2977 -337 2300 106 0 0 chr2 3308064 3308375 -247379479 - AluSx SINE Alu -1 311 1 1357 276 52 30 chr2 3308597 3309057 -247378797 + MLT1J LTR MaLR 23 492 -19 245 300 132 41 chr2 3309082 3309302 -247378552 - L2 LINE L2 -129 3184 2945 378 0 0 0 chr2 3309934 3309976 -247377878 + (CA)n Simple_repeat Simple_repeat 1 42 0 1633 213 20 20 chr2 3309977 3310324 -247377530 + MER7A DNA MER2_type 2 346 0 2429 150 33 17 chr2 3312060 3312479 -247375375 + MSTA LTR MaLR 1 426 -2 410 293 61 50 chr2 3313200 3313296 -247374558 - MIR SINE MIR -19 243 149 2266 84 3 0 chr2 3313296 3313593 -247374261 - AluSp SINE Alu -14 299 2 410 293 61 50 chr2 3313593 3313694 -247374160 - MIR SINE MIR -113 149 44 641 311 48 32 chr2 3315121 3315369 -247372485 + MIR SINE MIR 8 259 -3 391 204 23 11 chr2 3315369 3315457 -247372397 + MLT1A1 LTR MaLR 1 89 -276 269 200 9 29 chr2 3315670 3315775 -247372079 + (TG)n Simple_repeat Simple_repeat 2 104 0 344 242 7 39 chr2 3315800 3316223 -247371631 + (TG)n Simple_repeat Simple_repeat 1 409 0 311 281 149 9 chr2 3317988 3318209 -247369645 + L1ME LINE L1 5097 5348 -798 249 310 120 37 chr2 3318215 3318515 -247369339 + L1ME LINE L1 5368 5692 -429 633 316 24 14 chr2 3318571 3318783 -247369071 - L2 LINE L2 0 3313 3100 237 189 117 99 chr2 3318958 3319069 -247368785 + L1ME4a LINE L1 5973 6085 -36 18364 62 10 17 chr2 3324098 3326420 -247361434 + HERVL LTR ERVL 3105 5410 -244 707 261 123 22 chr2 3326588 3327001 -247360853 - MLT1C LTR MaLR -12 455 1 2093 139 126 23 chr2 3327530 3327918 -247359936 + MSTA LTR MaLR 1 428 0 8332 157 26 51 chr2 3327920 3329539 -247358315 + MSTA-int LTR MaLR 3 1580 0 1604 162 184 11 chr2 3329539 3329904 -247357950 + MSTA LTR MaLR 1 428 0 392 267 18 0 chr2 3331801 3332266 -247355588 + (CA)n Simple_repeat Simple_repeat 1 473 0 233 274 171 17 chr2 3332697 3332814 -247355040 - MIR SINE MIR -5 257 123 201 312 17 0 chr2 3333558 3333651 -247354203 - MIR SINE MIR -56 152 58 401 313 72 6 chr2 3334053 3334219 -247353635 - MIR SINE MIR -33 229 53 3475 216 71 25 chr2 3334549 3335534 -247352320 + L1MC3 LINE L1 6748 7777 -8 2205 104 139 11 chr2 3335656 3336031 -247351823 + MSTA LTR MaLR 6 428 0 794 50 0 0 chr2 3337554 3337655 -247350199 + HERVL-A1 LTR ERVL 5554 5654 0 2575 106 20 40 chr2 3337656 3338108 -247349746 + MLT2A1 LTR ERVL 2 444 0 1901 135 46 0 chr2 3339219 3339501 -247348353 + AluSq SINE Alu 1 295 -18 1030 303 157 35 chr2 3340267 3341128 -247346726 - L2 LINE L2 -1627 1687 722 351 269 23 110 chr2 3341172 3341436 -247346418 - L2 LINE L2 -2764 550 310 2292 74 0 7 chr2 3343088 3343371 -247344483 - AluY SINE Alu -10 301 21 196 337 11 11 chr2 3343646 3343735 -247344119 - L3 LINE CR1 -144 1433 1345 416 298 51 28 chr2 3344277 3344455 -247343399 + MIR SINE MIR 61 242 -20 249 217 16 71 chr2 3345275 3345459 -247342395 + (CA)n Simple_repeat Simple_repeat 1 174 0 392 199 11 72 chr2 3345859 3346040 -247341814 + (CA)n Simple_repeat Simple_repeat 1 170 0 433 274 17 23 chr2 3346078 3346253 -247341601 + (CA)n Simple_repeat Simple_repeat 2 175 0 2263 121 0 3 chr2 3347888 3348194 -247339660 - AluSx SINE Alu -7 305 1 283 258 75 21 chr2 3348896 3348989 -247338865 + MIR SINE MIR 103 200 -62 260 310 34 54 chr2 3352265 3352562 -247335292 - L2 LINE L2 -78 3235 2945 2334 78 29 13 chr2 3352570 3352876 -247334978 + AluY SINE Alu 1 311 0 358 326 228 12 chr2 3352897 3353462 -247334392 - L2 LINE L2 -911 2403 1717 796 262 5 0 chr2 3353966 3354157 -247333697 + MLT1A1 LTR MaLR 172 363 -2 8427 178 30 46 chr2 3354244 3357263 -247330591 + L1MA8 LINE L1 3319 6286 -5 27 0 0 0 chr2 3357264 3357291 -247330563 + AT_rich Low_complexity Low_complexity 1 27 0 290 228 40 40 chr2 3358345 3358446 -247329408 - MER45 DNA AcHobo -1439 142 42 625 169 23 31 chr2 3359267 3359331 -247328523 + MER45A DNA AcHobo 42 105 -1476 2262 115 0 3 chr2 3359331 3359627 -247328227 - AluSq SINE Alu -18 295 1 625 169 23 31 chr2 3359627 3359692 -247328162 + MER45A DNA AcHobo 105 170 -8 233 338 15 0 chr2 3359712 3359780 -247328074 + MIR3 SINE MIR 103 171 -37 287 193 102 45 chr2 3360074 3360162 -247327692 + MIR SINE MIR 108 200 -62 2647 68 0 0 chr2 3360224 3360533 -247327321 - AluY SINE Alu -1 310 2 759 333 36 45 chr2 3360631 3361437 -247326417 + L1MEc LINE L1 388 1186 -5377 3892 181 74 9 chr2 3361438 3362392 -247325462 + L1MB3 LINE L1 5165 6182 -1 423 184 34 54 chr2 3362399 3362546 -247325308 + L1MEc LINE L1 1178 1321 -5242 317 333 78 29 chr2 3362576 3362780 -247325074 + L1MEc LINE L1 1277 1490 -4894 333 283 87 46 chr2 3363063 3363282 -247324572 + L1ME LINE L1 5558 5785 -336 1715 175 0 31 chr2 3363338 3363673 -247324181 - AluJb SINE Alu 0 326 1 207 0 0 0 chr2 3364251 3364274 -247323580 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 21 82 0 0 chr2 3364941 3364990 -247322864 + AT_rich Low_complexity Low_complexity 1 49 0 2621 257 26 57 chr2 3365170 3365237 -247322617 - MER63C DNA MER1_type -138 922 854 2149 125 7 3 chr2 3365237 3365534 -247322320 - AluSq SINE Alu -15 298 1 2621 257 26 57 chr2 3365534 3366189 -247321665 - MER63C DNA MER1_type -206 854 233 710 208 19 19 chr2 3366189 3366348 -247321506 - L1MC1 LINE L1 0 6333 6175 2621 257 26 57 chr2 3366348 3366571 -247321283 - MER63C DNA MER1_type -827 233 5 294 73 0 0 chr2 3366793 3366834 -247321020 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 219 286 52 45 chr2 3366893 3367047 -247320807 + L2 LINE L2 2898 3052 -220 1698 264 146 26 chr2 3367686 3368014 -247319840 - L1ME3A LINE L1 -1 6169 5882 4277 101 28 2 chr2 3368014 3368657 -247319197 - MER4A LTR ERV1 -2 662 3 1698 264 146 26 chr2 3368657 3369181 -247318673 - L1ME3A LINE L1 -288 5882 5187 302 313 76 8 chr2 3369298 3369429 -247318425 - MIR SINE MIR -91 171 32 256 289 19 48 chr2 3369748 3369852 -247318002 - L2 LINE L2 -95 3218 3118 200 258 17 146 chr2 3369884 3370062 -247317792 - L2 LINE L2 -201 3071 2917 409 261 112 63 chr2 3370126 3370599 -247317255 + MLT1H LTR MaLR 4 540 -9 351 113 0 0 chr2 3370691 3370744 -247317110 + (T)n Simple_repeat Simple_repeat 1 53 0 205 324 0 0 chr2 3371061 3371135 -247316719 + (CCCA)n Simple_repeat Simple_repeat 2 75 0 1482 326 163 17 chr2 3371135 3372397 -247315457 + L2 LINE L2 1478 2923 -391 2647 71 0 0 chr2 3372397 3372707 -247315147 + AluY SINE Alu 1 310 -1 209 269 171 23 chr2 3373929 3374104 -247313750 + L2 LINE L2 3113 3313 0 241 267 58 12 chr2 3375430 3375516 -247312338 - MIR SINE MIR -68 140 51 267 143 0 0 chr2 3375656 3375698 -247312156 - 5S rRNA rRNA -79 42 1 410 177 13 0 chr2 3375962 3376041 -247311813 + MADE1 DNA Mariner 1 80 0 192 125 0 0 chr2 3376175 3376207 -247311647 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 231 173 0 0 chr2 3376370 3376422 -247311432 + (CA)n Simple_repeat Simple_repeat 1 52 0 227 143 41 0 chr2 3376552 3376601 -247311253 + A-rich Low_complexity Low_complexity 2 52 0 191 234 64 0 chr2 3378696 3378743 -247309111 - L2 LINE L2 -11 3302 3253 1617 182 23 28 chr2 3378792 3379144 -247308710 - L1MB2 LINE L1 0 6171 5822 355 194 0 0 chr2 3379151 3379223 -247308631 - L1MB2 LINE L1 -666 5517 5446 219 358 0 0 chr2 3380057 3380138 -247307716 + MIR SINE MIR 56 136 -72 23 0 0 0 chr2 3380894 3380917 -247306937 + AT_rich Low_complexity Low_complexity 1 23 0 267 342 43 0 chr2 3384684 3384801 -247303053 - MIR SINE MIR -108 154 33 2314 114 0 0 chr2 3385064 3385363 -247302491 - AluSg SINE Alu -11 299 1 421 208 37 34 chr2 3385562 3385884 -247301970 + (TG)n Simple_repeat Simple_repeat 1 323 0 1010 282 59 9 chr2 3386116 3386538 -247301316 - L1MB2 LINE L1 -1213 4933 4491 909 321 23 19 chr2 3386557 3387034 -247300820 - L1MB2 LINE L1 -2318 3828 3350 303 316 83 30 chr2 3387051 3387184 -247300670 - L1MB2 LINE L1 -3895 2251 2112 1118 279 113 33 chr2 3387196 3387683 -247300171 - LTR41 LTR ERVL -15 758 233 890 275 93 7 chr2 3387798 3388089 -247299765 - LTR41 LTR ERVL -457 316 1 2576 78 28 11 chr2 3388203 3388561 -247299293 - L1PA8 LINE L1 -13 6159 5796 544 324 105 42 chr2 3388845 3389342 -247298512 - L1MEc LINE L1 -4431 2150 1544 2057 126 7 0 chr2 3389342 3389651 -247298203 - AluSx SINE Alu -1 311 1 544 324 105 42 chr2 3389651 3389924 -247297930 - L1MEc LINE L1 -5037 1544 1290 1213 219 33 91 chr2 3390516 3390566 -247297288 + MLT1A2 LTR MaLR 1 52 -322 2211 102 0 7 chr2 3390566 3390869 -247296985 - AluSq SINE Alu 0 313 13 1213 219 33 91 chr2 3390869 3391215 -247296639 + MLT1A2 LTR MaLR 52 374 0 211 286 95 29 chr2 3393587 3393692 -247294162 + MIR3 SINE MIR 49 160 -48 23 0 0 0 chr2 3394006 3394029 -247293825 + AT_rich Low_complexity Low_complexity 1 23 0 317 235 88 0 chr2 3394029 3394131 -247293723 - L1MA9 LINE L1 -22 6290 6180 1700 205 57 8 chr2 3394137 3394415 -247293439 - L1MA9 LINE L1 -235 6077 5775 225 83 0 0 chr2 3394415 3394451 -247293403 + (TG)n Simple_repeat Simple_repeat 1 36 0 1700 205 57 8 chr2 3394451 3394542 -247293312 - L1MA9 LINE L1 -537 5775 5690 312 153 53 38 chr2 3395114 3395245 -247292609 + (AGTTG)n Simple_repeat Simple_repeat 3 135 0 1201 240 53 120 chr2 3395420 3396025 -247291829 - MLT1E1 LTR MaLR 0 637 92 189 340 20 30 chr2 3396308 3396408 -247291446 - MIR SINE MIR -62 146 48 2114 122 0 10 chr2 3396677 3396981 -247290873 - AluSx SINE Alu -9 303 3 279 322 0 11 chr2 3398413 3398500 -247289354 + MIR3 SINE MIR 117 202 -6 487 157 24 0 chr2 3398528 3398611 -247289243 - L1MB5 LINE L1 -12 6162 6078 1444 136 9 5 chr2 3400449 3400669 -247287185 + AluSq SINE Alu 71 291 -22 899 248 17 8 chr2 3401153 3401387 -247286467 + MLT1D LTR MaLR 7 242 -263 473 311 54 11 chr2 3402185 3402445 -247285409 - MER90 LTR ERV1 -210 404 134 216 200 0 0 chr2 3402844 3402909 -247284945 + GA-rich Low_complexity Low_complexity 2 66 0 184 79 48 48 chr2 3404298 3404361 -247283493 + (CAA)n Simple_repeat Simple_repeat 3 65 0 292 205 26 45 chr2 3404361 3404517 -247283337 + (CACAC)n Simple_repeat Simple_repeat 1 153 0 207 62 62 31 chr2 3404553 3404618 -247283236 + (CACAA)n Simple_repeat Simple_repeat 5 71 0 224 130 48 48 chr2 3404729 3404875 -247282979 + (CACAA)n Simple_repeat Simple_repeat 2 147 0 285 255 157 24 chr2 3405787 3406024 -247281830 + MLT1J1 LTR MaLR 19 296 -154 196 298 48 48 chr2 3406528 3406632 -247281222 + L2 LINE L2 3208 3311 -2 201 313 12 0 chr2 3407033 3407113 -247280741 - MIR SINE MIR 0 262 182 197 358 0 15 chr2 3407124 3407191 -247280663 - MIR SINE MIR -181 81 16 1519 197 122 22 chr2 3408190 3408550 -247279304 - MSTD LTR MaLR 0 396 1 852 108 7 40 chr2 3409787 3409935 -247277919 - FLAM_C SINE Alu 0 143 1 962 156 6 19 chr2 3410163 3410323 -247277531 + L1PA8A LINE L1 5971 6128 -3 1589 277 47 38 chr2 3410832 3411409 -247276445 + MLT1E LTR MaLR 10 591 -2 368 265 0 6 chr2 3413885 3414055 -247273799 + C-rich Low_complexity Low_complexity 4 172 0 294 138 50 12 chr2 3414058 3414138 -247273716 + CT-rich Low_complexity Low_complexity 3 85 0 2072 137 42 31 chr2 3414218 3414577 -247273277 + THE1B LTR MaLR 1 363 -1 250 242 30 0 chr2 3414941 3415007 -247272847 + L2 LINE L2 2987 3054 -218 191 244 22 0 chr2 3415073 3415118 -247272736 + L2 LINE L2 3223 3268 -4 375 289 97 50 chr2 3417115 3417496 -247270358 + HAL1 LINE L1 1 399 -2108 1057 222 31 13 chr2 3417837 3418062 -247269792 - MER101B LTR ERV1 -341 229 1 374 366 79 9 chr2 3418075 3418403 -247269451 + HAL1 LINE L1 491 841 -1666 461 205 252 0 chr2 3419147 3419264 -247268590 + MLT2D LTR ERVL 226 312 -102 198 0 0 0 chr2 3419264 3419286 -247268568 + (TC)n Simple_repeat Simple_repeat 1 22 0 461 205 252 0 chr2 3419286 3419319 -247268535 + MLT2D LTR ERVL 312 414 0 471 240 0 0 chr2 3420243 3420339 -247267515 - L1MA7 LINE L1 -186 6105 6010 629 183 41 41 chr2 3420342 3420511 -247267343 + L1MA7 LINE L1 6123 6291 0 198 209 47 0 chr2 3421131 3421174 -247266680 - MIR SINE MIR -111 151 107 249 326 38 15 chr2 3422566 3422698 -247265156 + L1ME LINE L1 5634 5768 -353 2303 102 0 6 chr2 3422935 3423249 -247264605 + AluSx SINE Alu 1 312 0 254 284 69 35 chr2 3423715 3423831 -247264023 + MIR3 SINE MIR 62 181 -27 193 231 123 15 chr2 3425147 3425212 -247262642 - MIR SINE MIR -118 144 73 216 0 0 0 chr2 3426706 3426730 -247261124 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 306 287 189 14 chr2 3427260 3427403 -247260451 - MIR SINE MIR 0 262 95 774 244 114 36 chr2 3428805 3429112 -247258742 + MLT1D LTR MaLR 47 377 -128 192 195 0 24 chr2 3430018 3430059 -247257795 + MIR SINE MIR 33 72 -136 189 107 0 0 chr2 3430566 3430594 -247257260 + (TC)n Simple_repeat Simple_repeat 2 29 0 319 355 112 0 chr2 3432078 3432247 -247255607 - MIR SINE MIR -19 243 56 364 252 37 0 chr2 3432385 3432492 -247255362 + LTR33 LTR ERVL 101 211 -310 2188 92 3 0 chr2 3433744 3434038 -247253816 - AluSx SINE Alu -17 295 1 324 358 0 15 chr2 3435459 3435593 -247252261 - MER94 DNA DNA -2 132 1 222 343 59 20 chr2 3435875 3435977 -247251877 + L2 LINE L2 2948 3053 -219 227 375 36 27 chr2 3437769 3437881 -247249973 - L2 LINE L2 -18 3254 3142 360 0 0 0 chr2 3438083 3438123 -247249731 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 0 0 0 chr2 3438122 3438148 -247249706 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 220 356 134 18 chr2 3438526 3439079 -247248775 + L2 LINE L2 2325 2941 -373 187 185 160 76 chr2 3439247 3439366 -247248488 + L2 LINE L2 3137 3265 -7 250 226 11 113 chr2 3439723 3439909 -247247945 + GA-rich Low_complexity Low_complexity 5 171 0 224 255 246 0 chr2 3441314 3441433 -247246421 - MIR SINE MIR -65 143 41 21 0 0 0 chr2 3441708 3441729 -247246125 + AT_rich Low_complexity Low_complexity 1 21 0 240 297 63 51 chr2 3442702 3442877 -247244977 - MIR SINE MIR -6 256 80 237 394 32 7 chr2 3443289 3443444 -247244410 - L2 LINE L2 -599 2715 2557 350 289 0 0 chr2 3443457 3443540 -247244314 + L2 LINE L2 3189 3271 -1 206 223 0 109 chr2 3443992 3444185 -247243669 + C-rich Low_complexity Low_complexity 5 176 0 218 230 0 102 chr2 3444387 3444583 -247243271 + C-rich Low_complexity Low_complexity 2 177 0 252 208 18 83 chr2 3444666 3444834 -247243020 + C-rich Low_complexity Low_complexity 2 158 0 741 230 73 0 chr2 3444968 3445133 -247242721 - MER5B DNA MER1_type -1 177 1 1611 235 40 6 chr2 3447003 3447356 -247240498 - MLT1A1 LTR MaLR 0 365 1 738 323 126 41 chr2 3447489 3448468 -247239386 + L2 LINE L2 206 1267 -2047 236 298 50 16 chr2 3448471 3448592 -247239262 + L2 LINE L2 1581 1705 -1609 625 197 16 0 chr2 3448739 3448866 -247238988 + L1MC2 LINE L1 6215 6343 -1 571 269 84 52 chr2 3449880 3450361 -247237493 - MLT1H1 LTR MaLR 0 555 62 1046 132 44 11 chr2 3450624 3450938 -247236916 + THE1C LTR MaLR 1 375 0 10524 126 17 14 chr2 3450938 3452513 -247235341 + THE1C-int LTR MaLR 1 1580 0 1065 127 78 11 chr2 3452513 3452817 -247235037 + THE1C LTR MaLR 1 375 0 242 292 67 0 chr2 3452863 3452952 -247234902 - LTR16A LTR ERVL -260 190 96 276 330 19 0 chr2 3453331 3453437 -247234417 - HERV16 LTR ERVL -3575 1421 1314 212 209 0 0 chr2 3454441 3454484 -247233370 - L3 LINE CR1 -124 1453 1411 318 301 66 22 chr2 3454582 3454765 -247233089 - LTR16A LTR ERVL -93 357 167 359 200 42 11 chr2 3454820 3454915 -247232939 + L1MD3 LINE L1 7898 7995 0 236 310 159 7 chr2 3455600 3455745 -247232109 + MIR SINE MIR 14 180 -82 1711 193 171 8 chr2 3456027 3456395 -247231459 + MSTA LTR MaLR 1 428 0 467 297 31 0 chr2 3458039 3458167 -247229687 + MIR3 SINE MIR 72 203 -5 943 233 43 4 chr2 3458461 3458693 -247229161 - MLT1E LTR MaLR -9 584 344 413 295 63 16 chr2 3458780 3458970 -247228884 - MLT1E LTR MaLR -394 199 1 320 300 131 31 chr2 3459051 3459471 -247228383 - L2 LINE L2 -365 2949 2488 188 228 88 35 chr2 3459858 3459915 -247227939 + L2 LINE L2 3206 3265 -7 1272 270 91 0 chr2 3462651 3462969 -247224885 + MER7A DNA MER2_type 1 345 -1 332 303 0 64 chr2 3466939 3467179 -247220675 + C-rich Low_complexity Low_complexity 1 224 0 307 77 19 0 chr2 3468779 3468831 -247219023 - AluSx SINE Alu 0 301 249 1181 135 65 0 chr2 3468831 3469016 -247218838 - AluSx SINE Alu -115 197 1 349 307 50 14 chr2 3469521 3469661 -247218193 + MIR SINE MIR 5 149 -113 2080 259 39 74 chr2 3470617 3471027 -247216827 + MER21B LTR ERV1 1 373 -490 2354 111 39 28 chr2 3471027 3471387 -247216467 - THE1B LTR MaLR 0 364 1 2080 259 39 74 chr2 3471387 3471742 -247216112 + MER21B LTR ERV1 373 739 -124 315 271 243 11 chr2 3472868 3473045 -247214809 - MIR SINE MIR 0 262 45 250 352 19 0 chr2 3475489 3475594 -247212260 + MIR SINE MIR 31 137 -71 2200 151 8 30 chr2 3476332 3476704 -247211150 - THE1B LTR MaLR 0 364 1 302 353 131 20 chr2 3476762 3477359 -247210495 + L2 LINE L2 2047 2709 -605 2297 220 59 108 chr2 3477563 3477648 -247210206 + L1MC4 LINE L1 6460 6548 -1447 2166 91 10 3 chr2 3477648 3477946 -247209908 + AluSq SINE Alu 1 300 -13 2297 220 59 108 chr2 3477946 3479167 -247208687 + L1MC4 LINE L1 6548 7757 -238 210 267 0 0 chr2 3481307 3481352 -247206502 + (TATG)n Simple_repeat Simple_repeat 1 45 0 640 308 125 70 chr2 3482372 3482440 -247205414 + L1MEc LINE L1 1353 1416 -4971 2382 59 3 7 chr2 3482440 3482744 -247205110 + AluY SINE Alu 1 303 -8 640 308 125 70 chr2 3482744 3483105 -247204749 + L1MEc LINE L1 1416 1756 -4631 2122 200 42 9 chr2 3483105 3483535 -247204319 + LTR56 LTR ERV1 1 444 -1 640 308 125 70 chr2 3483535 3484172 -247203682 + L1MEc LINE L1 1756 2479 -3908 367 313 101 54 chr2 3484360 3484638 -247203216 + L1MEc LINE L1 2666 2956 -3259 36 53 0 0 chr2 3484883 3484940 -247202914 + AT_rich Low_complexity Low_complexity 1 57 0 466 295 122 73 chr2 3484942 3485352 -247202502 + L1MEc LINE L1 2990 3419 -2796 255 280 40 0 chr2 3485352 3485427 -247202427 + Tigger6 DNA MER2_type 1 78 -1519 232 286 71 0 chr2 3486843 3486955 -247200899 + MLT1L LTR MaLR 163 282 -333 254 242 0 77 chr2 3487118 3487209 -247200645 - L1MC4 LINE L1 -1341 6701 6618 1106 128 6 17 chr2 3487232 3487412 -247200442 + AluSg/x SINE Alu 135 312 0 318 269 21 21 chr2 3487625 3487718 -247200136 - L1MC4 LINE L1 -2643 5399 5307 2224 86 0 10 chr2 3487725 3488027 -247199827 - AluY SINE Alu -12 299 1 42 65 0 0 chr2 3488210 3488287 -247199567 + AT_rich Low_complexity Low_complexity 1 77 0 185 164 0 36 chr2 3489110 3489165 -247198689 + (TTA)n Simple_repeat Simple_repeat 2 54 0 208 264 83 0 chr2 3489822 3489894 -247197960 + MIR SINE MIR 127 204 -58 2086 141 141 5 chr2 3489979 3490355 -247197499 - MSTA LTR MaLR 0 428 2 1381 272 87 90 chr2 3490409 3492091 -247195763 - HAL1 LINE L1 0 2507 830 309 169 0 0 chr2 3492102 3492161 -247195693 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1966 184 46 90 chr2 3492161 3492661 -247195193 + MLT2B1 LTR ERVL 2 479 -41 218 202 40 40 chr2 3492661 3492758 -247195096 + (TA)n Simple_repeat Simple_repeat 2 101 -24 1231 168 26 17 chr2 3492758 3492990 -247194864 - MER46A DNA MER2_type 0 236 3 218 202 40 40 chr2 3492990 3493016 -247194838 + (TA)n Simple_repeat Simple_repeat 100 125 0 1391 59 0 0 chr2 3493069 3493239 -247194615 + LTR9 LTR ERV1 3 172 -440 395 229 4 88 chr2 3493241 3493454 -247194400 + L1MC4 LINE L1 6538 6646 -1139 393 269 0 23 chr2 3493440 3493572 -247194282 + L1MC4 LINE L1 6571 6646 -1139 * 359 281 0 44 chr2 3493527 3493641 -247194213 - L1MC4 LINE L1 -1323 6719 6611 * 374 271 21 10 chr2 3493595 3493691 -247194163 + L1MC4 LINE L1 6613 6709 -1333 358 259 8 76 chr2 3493625 3493756 -247194098 - L1MC4 LINE L1 -1333 6709 6588 * 342 273 0 30 chr2 3493737 3493836 -247194018 - L1MC4 LINE L1 -1333 6709 6614 * 217 214 0 0 chr2 3493852 3493928 -247193926 + (TG)n Simple_repeat Simple_repeat 1 76 0 258 61 0 0 chr2 3493938 3493971 -247193883 + MLT2C1 LTR ERVL 360 392 -5 224 167 21 0 chr2 3493980 3494028 -247193826 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3544 151 28 12 chr2 3494149 3494751 -247193103 - LTR9 LTR ERV1 0 612 1 239 273 79 43 chr2 3495174 3495313 -247192541 - HAL1 LINE L1 -2363 144 1 1955 128 0 23 chr2 3495688 3495994 -247191860 - AluSx SINE Alu -13 299 1 249 294 98 21 chr2 3496990 3497133 -247190721 - MER103 DNA DNA -2 164 11 207 333 23 0 chr2 3497362 3497449 -247190405 + CT-rich Low_complexity Low_complexity 2 90 0 2011 123 13 13 chr2 3497600 3497910 -247189944 + L1PA13 LINE L1 5546 5855 -308 1261 229 14 8 chr2 3497898 3498269 -247189585 + L1MB7 LINE L1 2824 3196 -2950 * 5122 133 3 1 chr2 3498268 3499673 -247188181 + L1PA12 LINE L1 4577 5984 -184 2063 170 25 0 chr2 3499673 3500037 -247187817 - L1M4 LINE L1 -483 5701 5329 1366 73 28 0 chr2 3500043 3500221 -247187633 + L1PA12 LINE L1 5985 6167 -1 352 176 46 183 chr2 3500222 3500287 -247187567 + L1MB7 LINE L1 4303 4337 -1809 2675 92 20 52 chr2 3500287 3500731 -247187123 - L1PB1 LINE L1 -3 6148 5719 352 176 46 183 chr2 3500731 3500818 -247187036 + L1MB7 LINE L1 4337 4434 -1712 3786 197 33 19 chr2 3500842 3501855 -247185999 + L1MB7 LINE L1 5102 6126 -58 1136 231 45 6 chr2 3501869 3502181 -247185673 - L1MA9 LINE L1 -38 6274 5951 2652 179 5 0 chr2 3502189 3502635 -247185219 - L1PA16 LINE L1 -4 6162 5715 1597 77 9 18 chr2 3502735 3502957 -247184897 - L1P LINE L1 -5926 220 1 * 4933 215 66 25 chr2 3502956 3504713 -247183141 - L1MDa LINE L1 -4536 2004 21 452 298 116 30 chr2 3504739 3504937 -247182917 - MIR SINE MIR -43 219 5 201 344 73 21 chr2 3504934 3505030 -247182824 + L2 LINE L2 3207 3307 -6 * 1869 142 14 3 chr2 3505321 3505616 -247182238 + AluSx SINE Alu 1 298 -14 654 250 95 20 chr2 3505769 3505969 -247181885 + MIR SINE MIR 9 223 -39 3231 38 0 0 chr2 3505970 3506564 -247181290 - L1P2 LINE L1 -570 5584 4991 381 57 19 0 chr2 3506564 3506609 -247181245 + L1PA6 LINE L1 6096 6149 -5 2444 187 17 15 chr2 3507199 3507660 -247180194 - MLT1C LTR MaLR 0 467 6 1964 121 10 3 chr2 3512140 3512429 -247175425 + AluSq SINE Alu 2 292 -21 1014 153 178 4 chr2 3512442 3512597 -247175257 + L1MC2 LINE L1 6057 6184 -160 180 0 0 0 chr2 3512597 3512617 -247175237 + (TG)n Simple_repeat Simple_repeat 1 20 0 1014 153 178 4 chr2 3512617 3512697 -247175157 + L1MC2 LINE L1 6184 6333 -11 575 205 45 39 chr2 3513067 3513223 -247174631 - MLT1D LTR MaLR -335 170 14 303 333 88 13 chr2 3513483 3513642 -247174212 + MIR SINE MIR 92 262 0 619 294 58 20 chr2 3513786 3514078 -247173776 - L1MC4a LINE L1 -201 7607 7305 384 22 0 0 chr2 3516025 3516070 -247171784 + (TG)n Simple_repeat Simple_repeat 2 46 0 * 441 0 0 0 chr2 3516069 3516118 -247171736 + (TA)n Simple_repeat Simple_repeat 1 49 0 233 326 52 22 chr2 3516451 3516586 -247171268 - LTR16A1 LTR ERVL 0 457 319 234 0 0 0 chr2 3517038 3517064 -247170790 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 4915 42 2 0 chr2 3517792 3518370 -247169484 + L1PA5 LINE L1 5576 6154 0 2021 117 0 0 chr2 3519866 3520172 -247167682 + AluSx SINE Alu 1 306 0 287 287 116 31 chr2 3520208 3520337 -247167517 + MIR SINE MIR 1 140 -122 219 363 66 0 chr2 3520827 3520918 -247166936 - MIR SINE MIR -115 147 51 273 286 55 11 chr2 3523635 3523726 -247164128 + L2 LINE L2 3162 3256 -16 1515 265 94 21 chr2 3526992 3527509 -247160345 - MER82 DNA MER2_type 0 653 99 1491 232 78 5 chr2 3527509 3527854 -247160000 + MLT2D LTR ERVL 1 378 -36 342 0 0 0 chr2 3527854 3527892 -247159962 + (CA)n Simple_repeat Simple_repeat 2 39 0 1491 232 78 5 chr2 3527892 3527930 -247159924 + MLT2D LTR ERVL 378 412 -2 437 162 0 27 chr2 3527930 3528004 -247159850 - MER82 DNA MER2_type -552 101 30 189 169 102 34 chr2 3530881 3530940 -247156914 + MIR SINE MIR 91 153 -55 344 301 18 26 chr2 3531269 3531382 -247156472 + MIR SINE MIR 21 132 -76 503 227 120 7 chr2 3531507 3531657 -247156197 + MER58B DNA MER1_type 172 338 -3 215 233 0 14 chr2 3533306 3533379 -247154475 + GA-rich Low_complexity Low_complexity 1 72 0 680 179 6 28 chr2 3533397 3533576 -247154278 + GA-rich Low_complexity Low_complexity 1 175 0 332 295 93 27 chr2 3533894 3534077 -247153777 - MLT1J1 LTR MaLR -16 430 236 373 358 18 0 chr2 3534110 3534275 -247153579 - MLT1J2 LTR MaLR -279 171 4 2573 103 22 8 chr2 3534326 3534684 -247153170 + THE1B LTR MaLR 1 363 -1 13040 119 18 6 chr2 3535035 3537083 -247150771 - Tigger1 DNA MER2_type 0 2418 346 194 291 0 0 chr2 3537743 3537798 -247150056 - L2 LINE L2 -575 2739 2685 335 228 79 59 chr2 3539726 3539827 -247148027 - L1ME4a LINE L1 -12 6109 6007 347 350 55 14 chr2 3540431 3540648 -247147206 - MIR SINE MIR -15 247 22 280 229 16 0 chr2 3541715 3541776 -247146078 + L2 LINE L2 2998 3059 -213 188 323 0 0 chr2 3541944 3542006 -247145848 + L2 LINE L2 3187 3248 -24 233 353 8 8 chr2 3542021 3542140 -247145714 + MLT1E LTR MaLR 44 162 -431 244 233 41 0 chr2 3542174 3542247 -247145607 + MLT1E LTR MaLR 431 506 -87 215 324 65 88 chr2 3542463 3542633 -247145221 + MIR SINE MIR 1 166 -96 271 298 67 0 chr2 3542639 3542743 -247145111 - L2 LINE L2 -8 3264 3154 3592 14 0 10 chr2 3544224 3544668 -247143186 - L1PA2 LINE L1 0 6155 5747 4075 8 0 0 chr2 3544668 3545144 -247142710 + L1PA2 LINE L1 5279 5754 -401 248 318 131 0 chr2 3545707 3545814 -247142040 + MIR SINE MIR 33 153 -55 268 271 10 165 chr2 3546217 3546612 -247141242 - L2 LINE L2 -80 3233 2900 204 329 0 14 chr2 3546601 3546674 -247141180 + L2 LINE L2 3242 3313 0 * 2615 62 0 0 chr2 3546677 3546985 -247140869 - AluY SINE Alu -3 308 1 309 269 168 30 chr2 3547040 3547207 -247140647 - L2 LINE L2 -493 2821 2632 264 156 0 0 chr2 3547319 3547364 -247140490 + L1PA16 LINE L1 6121 6165 -1 5686 250 58 45 chr2 3547660 3548135 -247139719 + L1MB1 LINE L1 1182 1649 -4755 19332 45 0 1 chr2 3548135 3551286 -247136568 - L1PA5 LINE L1 -4 6150 3001 5686 250 58 45 chr2 3551286 3551427 -247136427 + L1MB1 LINE L1 1649 1787 -4617 180 0 0 0 chr2 3551427 3551447 -247136407 + (CA)n Simple_repeat Simple_repeat 1 20 0 5686 250 58 45 chr2 3551447 3553424 -247134430 + L1MB1 LINE L1 1787 3736 -2668 664 122 0 0 chr2 3553424 3553514 -247134340 + AluJ/FLAM SINE Alu 13 102 -210 676 200 0 16 chr2 3553521 3553646 -247134208 + FRAM SINE Alu 53 175 -1 5686 250 58 45 chr2 3553646 3556149 -247131705 + L1MB1 LINE L1 3741 6402 -2 3671 201 57 103 chr2 3556172 3556951 -247130903 - MLT1B-int LTR MaLR -125 1246 551 2722 123 0 5 chr2 3556951 3557359 -247130495 - L1PA13 LINE L1 0 6163 5758 3671 201 57 103 chr2 3557359 3557886 -247129968 - MLT1B-int LTR MaLR -820 551 1 1596 188 48 10 chr2 3557886 3558258 -247129596 - MLT1B LTR MaLR 0 467 1 509 239 5 0 chr2 3558272 3558495 -247129359 + (TG)n Simple_repeat Simple_repeat 1 224 0 190 366 46 7 chr2 3558522 3558675 -247129179 - L2 LINE L2 -1364 1950 1792 252 243 14 0 chr2 3559307 3559381 -247128473 + HAL1 LINE L1 2322 2396 -111 208 254 42 14 chr2 3560810 3560881 -247126973 + L3 LINE CR1 1349 1421 -156 214 356 57 26 chr2 3561295 3561489 -247126365 + L3 LINE CR1 1244 1443 -134 311 282 36 45 chr2 3561941 3562051 -247125803 + MIR SINE MIR 38 146 -62 425 315 56 28 chr2 3562620 3562798 -247125056 - MIR SINE MIR -6 256 74 780 271 199 14 chr2 3562906 3563323 -247124531 + MLT1D LTR MaLR 2 495 -10 295 302 232 23 chr2 3563383 3563853 -247124001 + L2 LINE L2 2172 2739 -575 743 203 96 12 chr2 3564209 3564517 -247123337 + MSTD LTR MaLR 6 395 -1 294 293 95 26 chr2 3564520 3564636 -247123218 + L2 LINE L2 3188 3311 -2 337 356 10 0 chr2 3564663 3564767 -247123087 - MIR SINE MIR -99 163 59 701 329 109 22 chr2 3565443 3565939 -247121915 - MLT1G LTR MaLR 0 590 52 1905 181 35 46 chr2 3566001 3566432 -247121422 - MSTC LTR MaLR 0 428 3 1320 198 32 0 chr2 3566458 3566741 -247121113 - MLT1B LTR MaLR -19 371 80 210 184 20 0 chr2 3570126 3570175 -247117679 + (CA)n Simple_repeat Simple_repeat 1 50 0 294 95 0 0 chr2 3572283 3572325 -247115529 + (GA)n Simple_repeat Simple_repeat 1 42 0 429 54 0 0 chr2 3572609 3572665 -247115189 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 266 316 0 0 chr2 3572921 3573000 -247114854 + (CA)n Simple_repeat Simple_repeat 2 80 0 630 215 47 29 chr2 3574866 3575038 -247112816 + MLT1A1 LTR MaLR 1 175 -190 2225 207 38 47 chr2 3575070 3575646 -247112208 + MLT1A1-int LTR MaLR 142 712 -1023 407 206 19 77 chr2 3575845 3576000 -247111854 + MLT1A1-int LTR MaLR 973 1118 -617 * 1169 212 141 96 chr2 3575993 3576441 -247111413 + MLT1A1-int LTR MaLR 1268 1735 0 787 231 5 39 chr2 3576441 3576644 -247111210 + MLT1A1 LTR MaLR 1 196 -169 930 221 20 0 chr2 3576662 3576861 -247110993 + MLT1A1 LTR MaLR 161 363 -2 1856 118 82 25 chr2 3578140 3578495 -247109359 - THE1C LTR MaLR 0 375 1 420 72 40 59 chr2 3580895 3581047 -247106807 + (CA)n Simple_repeat Simple_repeat 2 150 0 201 184 48 39 chr2 3581050 3581153 -247106701 + (CACAC)n Simple_repeat Simple_repeat 4 107 0 268 103 52 31 chr2 3581156 3581253 -247106601 + (CA)n Simple_repeat Simple_repeat 1 99 0 207 213 0 21 chr2 3581463 3581510 -247106344 + CT-rich Low_complexity Low_complexity 1 46 0 412 198 16 59 chr2 3581661 3581935 -247105919 + GA-rich Low_complexity Low_complexity 1 262 0 200 237 68 0 chr2 3582259 3582318 -247105536 + CT-rich Low_complexity Low_complexity 4 66 0 192 354 21 10 chr2 3584195 3584291 -247103563 + L2 LINE L2 2666 2762 -552 835 249 40 57 chr2 3584540 3584894 -247102960 + MLT1B LTR MaLR 18 365 -25 577 205 22 6 chr2 3585166 3585697 -247102157 + (CA)n Simple_repeat Simple_repeat 1 539 0 254 159 0 79 chr2 3585697 3585760 -247102094 - MER4-int LTR ERV1 -5432 1166 1109 387 227 13 7 chr2 3585770 3585920 -247101934 + (CA)n Simple_repeat Simple_repeat 2 152 0 368 322 11 11 chr2 3585934 3586111 -247101743 + (CA)n Simple_repeat Simple_repeat 1 177 0 359 226 19 7 chr2 3586125 3586280 -247101574 + (CA)n Simple_repeat Simple_repeat 1 157 0 295 195 183 0 chr2 3588045 3588127 -247099727 + MIR SINE MIR 61 157 -105 188 233 67 50 chr2 3588080 3588140 -247099714 - L2 LINE L2 -1887 1427 1367 * 521 359 35 37 chr2 3588343 3588805 -247099049 + L2 LINE L2 2156 2616 -698 22 0 0 0 chr2 3588966 3588988 -247098866 + AT_rich Low_complexity Low_complexity 1 22 0 531 0 0 0 chr2 3589496 3589555 -247098299 + (TA)n Simple_repeat Simple_repeat 2 60 0 275 88 35 53 chr2 3589555 3589612 -247098242 + LTR33A LTR ERVL 450 505 -18 23 0 0 0 chr2 3590230 3590253 -247097601 + AT_rich Low_complexity Low_complexity 1 23 0 435 335 11 47 chr2 3590892 3591083 -247096771 + L1ME4a LINE L1 5731 5914 -207 260 300 47 0 chr2 3591093 3591243 -247096611 + L1ME4a LINE L1 5956 6112 -9 621 294 45 81 chr2 3591601 3592022 -247095832 + L2 LINE L2 2127 2532 -782 183 333 0 0 chr2 3592123 3592177 -247095677 - MIR SINE MIR -128 134 81 275 303 11 22 chr2 3593457 3593635 -247094219 + (TGAG)n Simple_repeat Simple_repeat 4 179 0 418 223 54 18 chr2 3596423 3596535 -247091319 - MIR3 SINE MIR 0 208 93 425 286 104 16 chr2 3596705 3596897 -247090957 - MIR SINE MIR -48 214 6 3686 122 23 28 chr2 3597085 3597685 -247090169 + MER4A LTR ERV1 1 597 -3 229 179 45 143 chr2 3598866 3598978 -247088876 - MLT1L LTR MaLR -220 395 295 550 238 41 8 chr2 3601218 3601340 -247086514 - MIR SINE MIR -70 192 67 340 262 0 36 chr2 3601417 3601501 -247086353 - MIR SINE MIR -29 233 153 1039 256 94 20 chr2 3601574 3601996 -247085858 + L1ME1 LINE L1 5717 6334 0 294 375 26 7 chr2 3602941 3603093 -247084761 - MIR SINE MIR -50 212 58 198 247 129 54 chr2 3603105 3603198 -247084656 - MIR SINE MIR -3 259 160 245 216 114 34 chr2 3603338 3603426 -247084428 + MLT1I LTR MaLR 114 208 -201 277 279 0 0 chr2 3604233 3604294 -247083560 + L2 LINE L2 3208 3268 -4 270 260 115 29 chr2 3605138 3605242 -247082612 + MLT1J2 LTR MaLR 291 403 -47 550 253 217 9 chr2 3605273 3605695 -247082159 + L2 LINE L2 2701 3217 -96 555 173 0 0 chr2 3605704 3605872 -247081982 + (TG)n Simple_repeat Simple_repeat 2 169 0 420 266 0 0 chr2 3605872 3605966 -247081888 + L2 LINE L2 3218 3311 -2 288 137 0 0 chr2 3606746 3606797 -247081057 + (T)n Simple_repeat Simple_repeat 1 51 0 260 239 28 0 chr2 3608147 3608218 -247079636 - L1MA6 LINE L1 -167 6133 6061 2731 186 227 70 chr2 3610638 3611518 -247076336 - LTR28 LTR ERV1 -2 1018 1 208 261 92 0 chr2 3612041 3612106 -247075748 - L2 LINE L2 -10 3303 3233 271 152 0 0 chr2 3614280 3614326 -247073528 + U6 snRNA snRNA 62 107 0 2171 123 3 0 chr2 3614507 3614800 -247073054 - AluSp SINE Alu -19 294 1 322 273 61 61 chr2 3615101 3615427 -247072427 - L1M4 LINE L1 -595 5583 5258 649 364 68 23 chr2 3615449 3616009 -247071845 - L1M4 LINE L1 -922 5224 4640 1691 182 17 14 chr2 3616010 3616307 -247071547 - AluJo SINE Alu -14 298 1 1091 151 47 0 chr2 3616320 3616532 -247071322 - L1M2 LINE L1 -647 5644 5423 805 211 0 0 chr2 3616527 3616693 -247071161 + L1M2 LINE L1 5628 5793 -507 * 437 187 0 37 chr2 3616693 3616880 -247070974 + (TA)n Simple_repeat Simple_repeat 1 180 0 196 194 0 28 chr2 3616891 3616963 -247070891 + (TA)n Simple_repeat Simple_repeat 1 70 0 303 129 57 71 chr2 3616964 3617034 -247070820 + L1MCa LINE L1 2000 2068 -4358 408 160 7 35 chr2 3617034 3617178 -247070676 + (TA)n Simple_repeat Simple_repeat 1 140 0 268 313 73 20 chr2 3617182 3617428 -247070426 + L1MC3 LINE L1 5750 6008 -1777 * 2229 128 39 25 chr2 3617214 3617645 -247070209 + L1MA8 LINE L1 5782 6218 -73 458 286 86 37 chr2 3617656 3617901 -247069953 - L1M4 LINE L1 -1503 4643 4387 1664 194 18 3 chr2 3617960 3618267 -247069587 + AluSx SINE Alu 1 311 0 571 314 62 47 chr2 3618278 3618419 -247069435 + MIR SINE MIR 1 149 -113 1826 189 36 3 chr2 3618419 3618752 -247069102 - MER7A DNA MER2_type -1 345 4 571 314 62 47 chr2 3618752 3618868 -247068986 + MIR SINE MIR 149 262 0 1774 236 17 48 chr2 3619533 3620015 -247067839 - MLT1C LTR MaLR 0 467 1 381 366 31 11 chr2 3620228 3620419 -247067435 - MIR SINE MIR -21 241 47 395 303 32 50 chr2 3623098 3623319 -247064535 - L2 LINE L2 -15 3298 3082 403 326 114 15 chr2 3623483 3623817 -247064037 - L2 LINE L2 -559 2755 2389 2595 163 19 26 chr2 3624086 3624440 -247063414 - MSTB LTR MaLR 0 426 74 2402 98 0 0 chr2 3624440 3624745 -247063109 - AluSg SINE Alu -5 305 1 2595 163 19 26 chr2 3624745 3624819 -247063035 - MSTB LTR MaLR -352 74 1 261 348 62 53 chr2 3625029 3625589 -247062265 + L2 LINE L2 2517 3082 -190 789 222 11 6 chr2 3626503 3626683 -247061171 - MLT1A1 LTR MaLR 0 365 185 1976 81 16 0 chr2 3626743 3626991 -247060863 + AluSp SINE Alu 44 295 -18 323 189 0 113 chr2 3627030 3627052 -247060802 - MLT1A1 LTR MaLR -334 94 71 2163 119 10 3 chr2 3627052 3627354 -247060500 - AluSg SINE Alu -6 304 1 323 189 0 113 chr2 3627354 3627437 -247060417 - MLT1A1 LTR MaLR -357 71 1 1437 278 123 24 chr2 3627626 3628339 -247059515 - L1MC4 LINE L1 -87 7955 7172 322 309 55 68 chr2 3628414 3628576 -247059278 - MIR SINE MIR -12 250 90 2325 171 15 22 chr2 3628576 3629033 -247058821 - MSTB2 LTR MaLR -3 454 1 322 309 55 68 chr2 3629033 3629090 -247058764 - MIR SINE MIR -172 90 34 32 0 0 0 chr2 3629667 3629699 -247058155 + AT_rich Low_complexity Low_complexity 1 32 0 2256 120 10 0 chr2 3630063 3630362 -247057492 + AluSx SINE Alu 1 302 -10 186 222 0 0 chr2 3631162 3631216 -247056638 + A-rich Low_complexity Low_complexity 1 54 0 1104 227 97 61 chr2 3631245 3631690 -247056164 + MER101 LTR ERV1 5 465 -9 378 299 28 57 chr2 3632204 3632402 -247055452 + L1MC4a LINE L1 5574 5590 -531 3948 171 25 14 chr2 3632402 3633116 -247054738 + MER72 LTR ERV1 1 722 0 378 299 28 57 chr2 3633116 3633269 -247054585 + L1MC4a LINE L1 5590 5746 -375 258 323 91 0 chr2 3633613 3633712 -247054142 - MIR SINE MIR -63 145 38 318 261 72 36 chr2 3635595 3635706 -247052148 + L2 LINE L2 3125 3239 -33 220 245 19 0 chr2 3635984 3636037 -247051817 + L2 LINE L2 3258 3311 -2 247 264 17 142 chr2 3636071 3636212 -247051642 + MIR SINE MIR 32 153 -66 321 265 15 0 chr2 3636296 3636364 -247051490 - L2 LINE L2 0 3313 3245 581 321 125 27 chr2 3636606 3636974 -247050880 - L2 LINE L2 -18 3254 2851 254 295 114 30 chr2 3638027 3638182 -247049672 + MIR SINE MIR 39 212 -50 2203 81 13 3 chr2 3638182 3638492 -247049362 + AluSq SINE Alu 1 313 0 254 295 114 30 chr2 3638492 3638533 -247049321 + MIR SINE MIR 212 248 -14 397 186 0 72 chr2 3639152 3639345 -247048509 + C-rich Low_complexity Low_complexity 2 180 0 467 272 35 0 chr2 3639362 3639535 -247048319 + C-rich Low_complexity Low_complexity 2 180 0 365 314 0 0 chr2 3639548 3639723 -247048131 + (CACCC)n Simple_repeat Simple_repeat 4 178 0 199 292 42 31 chr2 3640316 3640412 -247047442 - MIR3 SINE MIR -25 183 87 2033 113 0 0 chr2 3641152 3641434 -247046420 + AluSx SINE Alu 3 284 -28 770 240 134 55 chr2 3643145 3643511 -247044343 - MSTD LTR MaLR -1 395 1 306 304 21 29 chr2 3643544 3643696 -247044158 - MIR SINE MIR -67 141 3 2009 89 0 4 chr2 3643992 3644263 -247043591 + AluSc SINE Alu 25 294 -15 535 105 26 0 chr2 3645083 3645201 -247042653 + AluSg/x SINE Alu 201 320 0 27 29 0 0 chr2 3645874 3645908 -247041946 + AT_rich Low_complexity Low_complexity 1 34 0 315 285 36 67 chr2 3647251 3647416 -247040438 - L2 LINE L2 -1 3312 3153 352 339 23 8 chr2 3647519 3647649 -247040205 + L2 LINE L2 3137 3268 -4 4464 187 55 23 chr2 3647653 3648626 -247039228 - L1MA9 LINE L1 -38 6274 5270 2084 217 70 2 chr2 3648625 3649123 -247038731 + L1MA9 LINE L1 4728 5259 -887 * 2005 144 0 3 chr2 3649544 3649849 -247038005 - AluJb SINE Alu -6 306 3 181 371 86 19 chr2 3651208 3651464 -247036390 - L2 LINE L2 -457 2857 2585 474 224 63 29 chr2 3652721 3652895 -247034959 - MER104 DNA MER2_type 0 180 1 198 366 24 0 chr2 3653195 3653277 -247034577 + L2 LINE L2 3184 3267 -5 371 263 108 61 chr2 3654009 3654287 -247033567 + L1MC5 LINE L1 7626 7916 -45 2394 72 0 0 chr2 3654852 3655159 -247032695 + AluY SINE Alu 1 307 -4 325 265 8 98 chr2 3655175 3655307 -247032547 + L1ME4a LINE L1 5580 5699 -422 298 308 42 49 chr2 3655344 3655521 -247032333 + L1ME4a LINE L1 5784 5960 -161 2046 128 0 3 chr2 3655521 3655818 -247032036 + AluSg SINE Alu 3 298 -12 298 308 42 49 chr2 3655818 3655903 -247031951 + L1ME4a LINE L1 5960 6044 -77 4633 208 49 36 chr2 3655903 3657601 -247030253 - L1MC2 LINE L1 -8 6754 5038 1680 174 0 10 chr2 3657601 3657894 -247029960 + AluJo SINE Alu 10 299 -13 4633 208 49 36 chr2 3657894 3658046 -247029808 - L1MC2 LINE L1 -1724 5038 4890 4879 229 70 87 chr2 3658059 3658122 -247029732 - L1MC2 LINE L1 -2113 4451 4388 2061 164 44 29 chr2 3658122 3658506 -247029348 + MLT1B LTR MaLR 1 390 0 4879 229 70 87 chr2 3658506 3659154 -247028700 - L1MC2 LINE L1 -2176 4388 3731 216 0 0 0 chr2 3659154 3659178 -247028676 + (TC)n Simple_repeat Simple_repeat 2 25 0 4879 229 70 87 chr2 3659178 3659283 -247028571 - L1MC2 LINE L1 -2833 3731 3626 716 284 0 0 chr2 3659283 3659452 -247028402 + MER6B DNA MER2_type 2 170 -40 4879 229 70 87 chr2 3659452 3661156 -247026698 - L1MC2 LINE L1 -2938 3626 1787 2886 194 29 23 chr2 3661159 3661310 -247026544 - L1MC2 LINE L1 -4852 1193 1044 2597 115 3 13 chr2 3661310 3661685 -247026169 + THE1C LTR MaLR 1 371 -4 2886 194 29 23 chr2 3661685 3662555 -247025299 - L1MC2 LINE L1 -5001 1044 517 224 215 37 103 chr2 3663259 3663366 -247024488 - MIR SINE MIR -65 143 44 340 195 79 14 chr2 3663786 3663953 -247023901 - ORSL DNA AcHobo 0 275 67 297 274 0 0 chr2 3665130 3665225 -247022629 + (TG)n Simple_repeat Simple_repeat 2 96 0 26 30 0 0 chr2 3665471 3665504 -247022350 + AT_rich Low_complexity Low_complexity 1 33 0 231 114 0 0 chr2 3665591 3665626 -247022228 + (A)n Simple_repeat Simple_repeat 1 35 0 2090 143 55 62 chr2 3667207 3667640 -247020214 - Tigger2a DNA MER2_type -4 430 1 218 316 60 8 chr2 3667715 3667832 -247020022 - MIR3 SINE MIR -24 184 62 2066 132 0 0 chr2 3670084 3670373 -247017481 - AluSx SINE Alu -23 289 1 200 261 62 43 chr2 3671670 3671799 -247016055 - MIR SINE MIR -112 150 20 336 268 148 0 chr2 3672180 3672322 -247015532 + MER45C DNA AcHobo 1 163 -790 355 281 43 49 chr2 3672498 3672683 -247015171 + MER45C DNA AcHobo 461 644 -309 1306 234 38 0 chr2 3673032 3673348 -247014506 + MER45B DNA AcHobo 713 1040 0 965 266 126 42 chr2 3675215 3675669 -247012185 + HAL1 LINE L1 597 1088 -1419 2055 127 0 0 chr2 3675669 3675968 -247011886 + AluSx SINE Alu 1 299 -13 497 298 104 31 chr2 3675980 3676336 -247011518 + L1MCc LINE L1 24 405 -6018 1706 263 127 43 chr2 3676490 3677189 -247010665 + L1MCc LINE L1 807 1446 -5495 1626 174 17 3 chr2 3677189 3677477 -247010377 + AluJb SINE Alu 7 298 -14 1706 263 127 43 chr2 3677477 3678521 -247009333 + L1MCc LINE L1 1446 2720 -4221 266 71 0 24 chr2 3678521 3678563 -247009291 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1706 263 127 43 chr2 3678563 3678597 -247009257 + L1MCc LINE L1 2720 2750 -4191 486 221 25 16 chr2 3678622 3678744 -247009110 + L1ME3A LINE L1 196 318 -6245 332 291 114 48 chr2 3678761 3679115 -247008739 + MLT1J1 LTR MaLR 6 343 -103 491 155 78 6 chr2 3679724 3680053 -247007801 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 248 368 9 35 chr2 3680067 3680181 -247007673 + MIR SINE MIR 2 112 -150 209 255 10 112 chr2 3680527 3680625 -247007229 + L2 LINE L2 3223 3310 -3 201 332 189 37 chr2 3680657 3680874 -247006980 - L2 LINE L2 -2 3270 3021 278 273 91 82 chr2 3682751 3682971 -247004883 - MIR SINE MIR -6 256 35 218 336 92 8 chr2 3683631 3683750 -247004104 - L3 LINE CR1 -1022 555 427 26 0 0 0 chr2 3684004 3684030 -247003824 + AT_rich Low_complexity Low_complexity 1 26 0 396 59 0 0 chr2 3684689 3684740 -247003114 + (CA)n Simple_repeat Simple_repeat 2 52 0 282 123 0 0 chr2 3684854 3684911 -247002943 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 219 336 75 9 chr2 3684966 3685073 -247002781 - MIR SINE MIR -61 147 34 310 346 92 65 chr2 3685581 3686029 -247001825 + L1ME3A LINE L1 323 782 -5590 317 377 20 20 chr2 3686164 3686310 -247001544 + L1ME3A LINE L1 1196 1341 -5043 917 298 124 21 chr2 3686422 3686985 -247000869 - MLT1E1 LTR MaLR -29 625 5 1048 287 111 25 chr2 3686997 3688866 -246998988 + L1ME3A LINE L1 1575 3554 -2828 * 3791 179 33 33 chr2 3688858 3689565 -246998289 + L1MB7 LINE L1 5048 5756 -428 1771 151 141 26 chr2 3689565 3689949 -246997905 - MSTA LTR MaLR 0 428 1 3791 179 33 33 chr2 3689949 3690357 -246997497 + L1MB7 LINE L1 5756 6163 -21 2144 273 79 22 chr2 3690380 3691974 -246995880 + L1ME3A LINE L1 4727 6397 -9 1112 165 58 145 chr2 3692056 3692456 -246995398 - MLT1A1 LTR MaLR 0 365 1 236 356 34 62 chr2 3693955 3694101 -246993753 - L2 LINE L2 -5 3267 3126 21 0 0 0 chr2 3694584 3694605 -246993249 + AT_rich Low_complexity Low_complexity 1 21 0 2267 103 3 0 chr2 3694608 3694900 -246992954 + AluSq SINE Alu 1 293 -20 4946 121 56 39 chr2 3696046 3697687 -246990167 + L1PA16 LINE L1 4495 6166 0 354 277 46 8 chr2 3697742 3697872 -246989982 + MIR3 SINE MIR 74 208 0 40 37 0 0 chr2 3697877 3697931 -246989923 + AT_rich Low_complexity Low_complexity 1 54 0 598 287 59 1 chr2 3698208 3698397 -246989457 - MIR SINE MIR -50 212 15 302 372 78 35 chr2 3699754 3700125 -246987729 - L2 LINE L2 -603 2711 2325 1037 177 36 64 chr2 3700171 3700391 -246987463 + AluJo SINE Alu 68 281 -31 4052 145 21 39 chr2 3700395 3700522 -246987332 + L1MA7 LINE L1 5484 5612 -679 2130 122 0 44 chr2 3700522 3700841 -246987013 + AluSx SINE Alu 5 309 -3 4052 145 21 39 chr2 3700841 3701536 -246986318 + L1MA7 LINE L1 5612 6291 0 364 88 81 0 chr2 3701685 3701765 -246986089 - L1MB1 LINE L1 -1 6167 6098 5171 79 11 4 chr2 3701798 3702157 -246985697 - L1PB1 LINE L1 -2 6149 5794 414 0 0 0 chr2 3702157 3702203 -246985651 + (TG)n Simple_repeat Simple_repeat 2 47 0 5171 79 11 4 chr2 3702203 3702564 -246985290 - L1PB1 LINE L1 -357 5794 5424 368 323 40 7 chr2 3702703 3702916 -246984938 + MIR SINE MIR 5 222 -40 1026 220 112 67 chr2 3702917 3703372 -246984482 - MLT1H LTR MaLR -1 548 22 263 304 91 28 chr2 3704009 3704262 -246983592 + MLT1J LTR MaLR 236 504 -7 400 217 148 41 chr2 3704880 3705124 -246982730 + HAL1b LINE L1 726 995 -353 238 182 18 0 chr2 3705305 3705360 -246982494 - MLT2B1 LTR ERVL 0 520 465 183 80 0 0 chr2 3705364 3705389 -246982465 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 768 215 133 7 chr2 3705446 3705803 -246982051 - MLT2B1 LTR ERVL -61 459 1 262 318 108 56 chr2 3706220 3706598 -246981256 + L2 LINE L2 2580 2977 -337 2316 99 0 3 chr2 3708841 3709135 -246978719 - AluSx SINE Alu -19 293 1 237 173 0 0 chr2 3709166 3709218 -246978636 - L1MB8 LINE L1 -14 6164 6113 * 5450 193 25 12 chr2 3709215 3710957 -246976897 + L1M2 LINE L1 4027 5787 -525 11533 179 49 23 chr2 3710960 3713434 -246974420 + L1P2 LINE L1 2253 4660 -1494 317 67 0 0 chr2 3713434 3713479 -246974375 + MADE1 DNA Mariner 1 45 -35 11533 179 49 23 chr2 3713479 3713754 -246974100 + L1P2 LINE L1 4660 4926 -1228 3339 46 0 5 chr2 3713754 3714171 -246973683 - L1PA5 LINE L1 -2 6152 5738 11533 179 49 23 chr2 3714171 3714765 -246973089 + L1PA5 LINE L1 4926 5733 -421 2974 152 26 8 chr2 3714743 3715520 -246972334 + L1PB4 LINE L1 4988 5774 -382 * 297 0 0 0 chr2 3715520 3715553 -246972301 + (TA)n Simple_repeat Simple_repeat 2 34 0 1230 160 27 114 chr2 3715867 3715963 -246971891 + L1PB4 LINE L1 5782 5885 -271 305 70 0 0 chr2 3715963 3716006 -246971848 + MADE1 DNA Mariner 35 77 -3 1230 160 27 114 chr2 3716006 3716284 -246971570 + L1PB4 LINE L1 5885 6156 0 2591 152 16 4 chr2 3716326 3717183 -246970671 + L1P4 LINE L1 4828 5692 -473 1740 175 10 0 chr2 3717186 3717478 -246970376 + AluJb SINE Alu 1 295 -17 882 172 0 0 chr2 3717698 3717867 -246969987 - L1MA5 LINE L1 0 7362 7194 4644 62 8 8 chr2 3717867 3718477 -246969377 + L1PA7 LINE L1 5543 6153 -1 410 173 0 0 chr2 3718479 3718560 -246969294 - L1MA5 LINE L1 -152 7210 7130 266 51 26 0 chr2 3718575 3718614 -246969240 - MADE1 DNA Mariner -40 40 1 4152 153 14 34 chr2 3718615 3719573 -246968281 - L1MA5 LINE L1 -234 7128 6207 436 50 0 200 chr2 3719573 3719673 -246968181 + MADE1 DNA Mariner 1 80 0 4152 153 14 34 chr2 3719673 3720248 -246967606 - L1MA5 LINE L1 -1155 6207 5622 1026 237 3 61 chr2 3720569 3720881 -246966973 - L1M2b LINE L1 -6915 294 1 412 222 18 66 chr2 3720974 3721141 -246966713 - L1MC4 LINE L1 -970 7072 6914 261 274 102 21 chr2 3721194 3721380 -246966474 - L1M4 LINE L1 -1817 4329 4129 249 119 0 0 chr2 3721511 3721553 -246966301 + (TC)n Simple_repeat Simple_repeat 1 42 0 458 247 100 20 chr2 3721565 3721816 -246966038 - L1M4 LINE L1 -2195 3951 3681 266 325 9 0 chr2 3722861 3722975 -246964879 - MER94 DNA DNA -19 115 1 227 271 76 34 chr2 3723314 3723432 -246964422 + MIR SINE MIR 106 228 -34 336 193 0 0 chr2 3724484 3724541 -246963313 - L2 LINE L2 -9 3304 3248 414 296 0 7 chr2 3724926 3725229 -246962625 + (CA)n Simple_repeat Simple_repeat 1 300 0 437 328 0 11 chr2 3725242 3725419 -246962435 + (CA)n Simple_repeat Simple_repeat 1 175 0 9261 195 48 29 chr2 3726289 3729100 -246958754 - L1MA5 LINE L1 -1603 5605 1810 2199 123 6 25 chr2 3729100 3729418 -246958436 + AluSx SINE Alu 1 312 0 9261 195 48 29 chr2 3729418 3730868 -246956986 - L1MA5 LINE L1 -5398 1810 390 2162 77 37 3 chr2 3930918 3931216 -246756638 + AluSx SINE Alu 1 308 -4 394 208 69 10 chr2 3931734 3931835 -246756019 - L1MC/D LINE L1 -2017 5768 5662 276 197 70 14 chr2 3931934 3932005 -246755849 + MER58C DNA MER1_type 127 201 -14 210 309 52 0 chr2 3933085 3933182 -246754672 + MIR SINE MIR 151 252 -10 243 267 0 69 chr2 3933383 3933499 -246754355 + G-rich Low_complexity Low_complexity 6 113 0 686 168 18 13 chr2 3934922 3935153 -246752701 + (CCCA)n Simple_repeat Simple_repeat 1 232 0 484 243 12 0 chr2 3935171 3935340 -246752514 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 * 582 188 28 11 chr2 3935313 3935489 -246752365 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 192 301 55 0 chr2 3940210 3940283 -246747571 - L2 LINE L2 -220 3052 2976 476 265 49 54 chr2 3942250 3942454 -246745400 - MIR SINE MIR -40 222 20 270 302 129 14 chr2 3947686 3947825 -246740029 - MIR SINE MIR -1 261 107 1315 213 33 26 chr2 3947986 3948291 -246739563 - MER44D DNA MER2_type -30 579 3 450 0 0 0 chr2 3948301 3948351 -246739503 + (TG)n Simple_repeat Simple_repeat 2 51 0 406 298 78 5 chr2 3948733 3948924 -246738930 + MIR SINE MIR 36 240 -22 205 216 83 49 chr2 3949195 3949309 -246738545 + MIR SINE MIR 11 139 -69 2205 104 0 0 chr2 3950690 3950988 -246736866 + AluSg SINE Alu 6 303 -7 357 323 110 16 chr2 3951428 3951714 -246736140 - L1ME LINE L1 -285 5836 5520 375 295 65 35 chr2 3952065 3952265 -246735589 - L2 LINE L2 -4 3309 3104 233 371 32 27 chr2 3952561 3952747 -246735107 - L2 LINE L2 -629 2685 2499 1737 141 0 14 chr2 3953316 3953593 -246734261 + AluSx SINE Alu 1 273 -39 1673 151 3 49 chr2 3955560 3955864 -246731990 + AluJo SINE Alu 1 290 -22 6698 196 160 9 chr2 3955912 3957544 -246730310 + L1PBa LINE L1 7 1884 -4979 3685 133 22 8 chr2 3957546 3958575 -246729279 + L1P5 LINE L1 4751 5794 -357 441 0 0 0 chr2 3958575 3958624 -246729230 + (TA)n Simple_repeat Simple_repeat 2 50 0 3685 133 22 8 chr2 3958624 3958651 -246729203 + L1P5 LINE L1 5794 5819 -332 2131 114 0 16 chr2 3960259 3960575 -246727279 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 3960575 3960596 -246727258 + AT_rich Low_complexity Low_complexity 1 21 0 1694 229 8 30 chr2 3961350 3961722 -246726132 + MLT1A1 LTR MaLR 1 364 -1 21 36 0 0 chr2 3962000 3962028 -246725826 + AT_rich Low_complexity Low_complexity 1 28 0 296 48 24 0 chr2 3962057 3962099 -246725755 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 231 114 0 0 chr2 3962100 3962135 -246725719 + (CGTTG)n Simple_repeat Simple_repeat 1 35 0 1928 150 0 0 chr2 3962137 3962424 -246725430 - AluSx SINE Alu -25 287 1 1433 176 3 102 chr2 3962689 3963013 -246724841 + AluJb SINE Alu 1 292 -20 393 136 0 0 chr2 3963649 3963715 -246724139 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 210 240 0 20 chr2 3965970 3966020 -246721834 + CT-rich Low_complexity Low_complexity 6 54 0 2145 96 10 0 chr2 3967038 3967340 -246720514 - AluSp SINE Alu -8 305 1 1830 143 24 0 chr2 3968068 3968355 -246719499 - AluSx SINE Alu -16 296 3 1224 266 65 54 chr2 3968382 3968919 -246718935 - L1ME1 LINE L1 -35 6131 5589 23 0 0 0 chr2 3969360 3969383 -246718471 + AT_rich Low_complexity Low_complexity 1 23 0 293 285 81 16 chr2 3970550 3970673 -246717181 - MIR SINE MIR -107 155 25 1837 130 74 0 chr2 3970728 3971012 -246716842 + AluSx SINE Alu 1 305 -7 207 0 0 0 chr2 3973114 3973137 -246714717 + (A)n Simple_repeat Simple_repeat 1 23 0 282 344 33 0 chr2 3973349 3973471 -246714383 - L2 LINE L2 -5 3308 3183 390 338 24 29 chr2 3975019 3975226 -246712628 + MIR SINE MIR 51 256 -6 1443 103 15 15 chr2 3979226 3979429 -246708425 + AluSq SINE Alu 2 204 -109 242 311 25 43 chr2 3980217 3980378 -246707476 - MIR3 SINE MIR -3 205 48 1657 156 33 0 chr2 3982785 3983029 -246704825 + AluJb SINE Alu 13 264 -48 667 224 44 6 chr2 3985527 3985710 -246702144 - L1MC4a LINE L1 -1951 5857 5668 333 195 37 49 chr2 3986550 3986632 -246701222 - L1MC4 LINE L1 -1326 6716 6636 218 269 0 0 chr2 3986940 3986992 -246700862 + GA-rich Low_complexity Low_complexity 1 52 0 553 271 109 35 chr2 3987469 3987809 -246700045 - MLT1J1 LTR MaLR -2 444 80 528 325 92 14 chr2 3989007 3989520 -246698334 - HAL1 LINE L1 -988 1519 967 2380 71 0 20 chr2 3990905 3991232 -246696622 + AluY SINE Alu 1 321 0 196 244 233 11 chr2 3991255 3991345 -246696509 - MIR SINE MIR -133 129 20 396 233 0 69 chr2 3991392 3991581 -246696273 + (CACAC)n Simple_repeat Simple_repeat 2 177 0 391 257 5 59 chr2 3991619 3991806 -246696048 + (CACAC)n Simple_repeat Simple_repeat 2 178 0 191 150 25 25 chr2 3992509 3992549 -246695305 - L2 LINE L2 -6 3307 3268 1036 252 66 7 chr2 3992561 3992835 -246695019 + L1MD2 LINE L1 6060 6349 -10 567 265 117 47 chr2 3993795 3994154 -246693700 - MLT1J2 LTR MaLR 0 450 67 757 160 56 0 chr2 3994297 3994422 -246693432 + AluJb SINE Alu 2 133 -179 1870 164 16 3 chr2 3994438 3994742 -246693112 + AluJb SINE Alu 1 308 -4 282 315 40 20 chr2 3994912 3995061 -246692793 + L1ME LINE L1 333 484 -5912 1648 198 60 11 chr2 3995678 3996031 -246691823 - MLT1A2 LTR MaLR -4 370 1 862 270 35 76 chr2 3996038 3996138 -246691716 + L1ME LINE L1 793 896 -5513 1038 212 38 19 chr2 3996138 3996350 -246691504 - MER20 DNA MER1_type -3 216 1 862 270 35 76 chr2 3996350 3996853 -246691001 + L1ME LINE L1 896 1371 -5038 2313 256 44 13 chr2 3996856 3997621 -246690233 + L1M4 LINE L1 3500 4288 -1858 1409 221 143 20 chr2 3997623 3998111 -246689743 + L1M4 LINE L1 4769 5316 -830 829 191 114 0 chr2 3998109 3998329 -246689525 - L1PA16 LINE L1 -1 6165 5921 * 5078 159 36 22 chr2 4002910 4002974 -246684880 - L1MA9 LINE L1 -5 6307 6245 375 23 0 0 chr2 4002974 4003018 -246684836 + (TG)n Simple_repeat Simple_repeat 1 44 0 1770 190 0 0 chr2 4003018 4003297 -246684557 - AluJo SINE Alu -33 279 1 5078 159 36 22 chr2 4003297 4004444 -246683410 - L1MA9 LINE L1 -66 6246 5071 2402 119 34 8 chr2 4004446 4004800 -246683054 + THE1B LTR MaLR 1 363 -1 9426 114 59 45 chr2 4004801 4006359 -246681495 + THE1B-int LTR MaLR 1 1580 0 2169 137 35 30 chr2 4006359 4006732 -246681122 + THE1C LTR MaLR 1 375 0 7292 126 18 129 chr2 4006732 4008334 -246679520 - Tigger4(Zombi) DNA MER2_type -1304 1427 4 8643 186 39 14 chr2 4008337 4010307 -246677547 - L1MA9 LINE L1 -1231 4915 2897 471 256 93 69 chr2 4010785 4011206 -246676648 - L1ME4a LINE L1 -74 6047 5617 701 289 39 10 chr2 4011647 4011851 -246676003 - MER58A DNA MER1_type 0 224 15 213 154 0 0 chr2 4013169 4013208 -246674646 + (CA)n Simple_repeat Simple_repeat 1 39 0 895 243 38 0 chr2 4014494 4014704 -246673150 - MER20 DNA MER1_type 0 219 2 1007 214 43 12 chr2 4016589 4016846 -246671008 + MLT1B LTR MaLR 1 265 -125 889 179 11 11 chr2 4016889 4017068 -246670786 + MLT1B LTR MaLR 23 201 -189 485 268 94 24 chr2 4018341 4018595 -246669259 + HAL1 LINE L1 578 849 -1658 664 287 142 12 chr2 4018832 4019170 -246668684 + HAL1 LINE L1 1162 1543 -964 476 284 130 41 chr2 4019185 4019445 -246668409 + HAL1 LINE L1 1584 1874 -633 7136 92 34 9 chr2 4019445 4020390 -246667464 - LTR5 LTR ERVK -1 968 1 476 284 130 41 chr2 4020390 4020421 -246667433 + HAL1 LINE L1 1874 1901 -606 1262 220 116 25 chr2 4020588 4020984 -246666870 - MLT1C LTR MaLR 0 467 36 289 279 0 0 chr2 4021289 4021375 -246666479 + LTR67 LTR ERVL 468 553 -4 361 82 0 0 chr2 4021525 4021574 -246666280 - MADE1 DNA Mariner 0 80 32 490 284 28 11 chr2 4025019 4025195 -246662659 + (TG)n Simple_repeat Simple_repeat 1 179 0 407 220 28 34 chr2 4025233 4025566 -246662288 + (TATG)n Simple_repeat Simple_repeat 1 331 0 337 246 23 14 chr2 4025573 4025934 -246661920 + (TG)n Simple_repeat Simple_repeat 1 364 0 216 149 0 0 chr2 4026604 4026651 -246661203 + (A)n Simple_repeat Simple_repeat 1 47 0 2238 125 0 3 chr2 4026653 4026965 -246660889 + AluSx SINE Alu 1 311 -1 214 235 86 37 chr2 4027149 4027230 -246660624 - MIR SINE MIR -58 150 66 886 294 95 33 chr2 4027519 4028237 -246659617 + HAL1 LINE L1 597 1358 -1149 421 267 59 72 chr2 4028333 4028554 -246659300 + MIR SINE MIR 45 262 0 470 274 150 16 chr2 4028560 4028866 -246658988 + HAL1 LINE L1 1441 1787 -720 773 244 101 0 chr2 4029166 4029383 -246658471 + MIR SINE MIR 14 252 -10 720 225 62 72 chr2 4029732 4030125 -246657729 + LTR42 LTR ERVL 4 478 -17 2677 87 6 0 chr2 4030158 4030515 -246657339 - THE1B LTR MaLR -5 359 1 186 356 37 37 chr2 4030980 4031115 -246656739 + L2 LINE L2 3138 3272 0 209 189 0 0 chr2 4031117 4031154 -246656700 + (TGAG)n Simple_repeat Simple_repeat 1 37 0 263 266 156 18 chr2 4031229 4031338 -246656516 - L2 LINE L2 -1 3271 3148 565 348 74 40 chr2 4033102 4033479 -246654375 + HAL1 LINE L1 1039 1428 -1079 2303 123 0 0 chr2 4033482 4033791 -246654063 - AluSx SINE Alu -3 309 1 405 293 151 52 chr2 4033801 4034166 -246653688 + L1MC4a LINE L1 5766 6166 -1642 429 283 123 42 chr2 4034185 4034397 -246653457 - MLT1I LTR MaLR -66 343 115 1100 244 139 11 chr2 4034731 4035496 -246652358 + L1M4 LINE L1 1643 2527 -3855 871 243 17 0 chr2 4035505 4035686 -246652168 + MER8 DNA MER2_type 1 184 -55 2004 209 51 6 chr2 4035686 4036159 -246651695 + L1M4 LINE L1 4939 5432 -950 706 190 8 0 chr2 4036159 4036280 -246651574 + FLAM_C SINE Alu 9 130 -13 1716 197 0 10 chr2 4036284 4036578 -246651276 + AluJo SINE Alu 3 293 -19 1671 166 40 3 chr2 4036581 4036978 -246650876 + L1M4 LINE L1 5456 5865 -555 229 328 46 15 chr2 4036988 4037119 -246650735 + HAL1b LINE L1 387 521 -827 265 301 52 22 chr2 4037657 4037793 -246650061 + L1M4c LINE L1 3831 3970 -2412 1173 325 130 44 chr2 4037802 4038082 -246649772 + L1M4c LINE L1 4109 4364 -2018 282 29 0 0 chr2 4038082 4038117 -246649737 + (CA)n Simple_repeat Simple_repeat 2 36 0 1173 325 130 44 chr2 4038117 4038731 -246649123 + L1M4c LINE L1 4364 5080 -1302 1086 248 105 16 chr2 4038748 4039062 -246648792 + MER2 DNA MER2_type 1 342 -2 744 315 22 8 chr2 4039094 4039327 -246648527 + MIR SINE MIR 11 241 -21 222 307 0 50 chr2 4040013 4040114 -246647740 + (CACG)n Simple_repeat Simple_repeat 3 98 0 4151 154 37 47 chr2 4043570 4044564 -246643290 - MER11C LTR ERVK 0 1071 1 2463 39 3 3 chr2 4046989 4047272 -246640582 - AluY SINE Alu -28 283 1 467 312 40 6 chr2 4048084 4048257 -246639597 - MIR SINE MIR -26 236 58 334 274 150 65 chr2 4048769 4049109 -246638745 + MLT1E LTR MaLR 285 592 -1 273 270 108 9 chr2 4049194 4049305 -246638549 - MIR SINE MIR -59 149 28 654 228 206 9 chr2 4050429 4050648 -246637206 + MLT1L LTR MaLR 349 610 -5 497 298 44 39 chr2 4050750 4050955 -246636899 + MIR SINE MIR 47 252 -10 186 143 0 0 chr2 4051803 4051838 -246636016 + (CCCA)n Simple_repeat Simple_repeat 4 38 0 372 274 177 26 chr2 4052623 4052933 -246634921 + MARNA DNA Mariner 26 382 -204 837 274 95 3 chr2 4053715 4054094 -246633760 + L1MDa LINE L1 16 429 -6111 2243 201 52 17 chr2 4054329 4054847 -246633007 + L1MC1 LINE L1 5786 6321 -12 272 245 13 8 chr2 4055007 4055103 -246632751 - MLT1J2 LTR MaLR -309 141 70 323 158 11 116 chr2 4055226 4055292 -246632562 - L1PA15 LINE L1 -172 5993 5938 2336 86 3 29 chr2 4055292 4055606 -246632248 - AluSx SINE Alu -6 306 1 323 158 11 116 chr2 4055606 4055634 -246632220 - L1PA15 LINE L1 -227 5938 5909 948 153 25 0 chr2 4055642 4055805 -246632049 + L1PA15 LINE L1 5995 6161 -4 23 0 0 0 chr2 4055806 4055829 -246632025 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr2 4057998 4058042 -246629812 + AT_rich Low_complexity Low_complexity 1 44 0 2015 66 4 0 chr2 4058518 4058775 -246629079 - L1PA5 LINE L1 0 6154 5897 320 124 8 63 chr2 4059091 4059163 -246628691 + MLT1A2 LTR MaLR 1 67 -307 1578 222 18 0 chr2 4059166 4059499 -246628355 - MER47A DNA MER2_type 0 366 28 1210 198 62 21 chr2 4059516 4059804 -246628050 + MLT1A2 LTR MaLR 75 374 0 1637 126 20 0 chr2 4064535 4064782 -246623072 + MER1B DNA MER1_type 1 252 -87 293 259 77 21 chr2 4064898 4065041 -246622813 + ERVL LTR ERVL 2543 2693 -3071 569 210 109 0 chr2 4065081 4065219 -246622635 + MER58C DNA MER1_type 61 213 -2 365 314 26 0 chr2 4066264 4066420 -246621434 + ERVL LTR ERVL 3153 3312 -2342 358 154 15 70 chr2 4066552 4066900 -246620954 + (CTCA)n Simple_repeat Simple_repeat 1 328 0 431 329 7 0 chr2 4067164 4067319 -246620535 + ERVL LTR ERVL 3777 3932 -1832 255 145 197 40 chr2 4067594 4067637 -246620217 + LTR33A LTR ERVL 434 469 -54 15088 127 22 17 chr2 4067637 4070043 -246617811 - Tigger1 DNA MER2_type 0 2418 1 255 145 197 40 chr2 4070043 4070075 -246617779 + LTR33A LTR ERVL 469 521 -2 199 377 8 16 chr2 4070127 4070249 -246617605 - L2 LINE L2 -950 2364 2244 710 327 111 44 chr2 4070360 4071306 -246616548 + L1MEd LINE L1 79 1087 -5032 548 296 145 88 chr2 4071359 4072253 -246615601 + L1MEd LINE L1 1234 2178 -4132 564 89 0 0 chr2 4072406 4072485 -246615369 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 2370 156 19 28 chr2 4073343 4073540 -246614314 + MSTB LTR MaLR 2 199 -227 1881 124 6 70 chr2 4073540 4073684 -246614170 + AluSx SINE Alu 3 155 -157 2290 108 0 0 chr2 4073684 4073989 -246613865 + AluSx SINE Alu 1 305 -7 1881 124 6 70 chr2 4073989 4074174 -246613680 + AluSx SINE Alu 155 311 -1 2370 156 19 28 chr2 4074174 4074405 -246613449 + MSTB LTR MaLR 199 426 0 7793 184 61 9 chr2 4074407 4075975 -246611879 + MSTB-int LTR MaLR 3 1651 0 2023 162 70 15 chr2 4075975 4076377 -246611477 + MSTB LTR MaLR 1 424 -2 209 289 64 80 chr2 4076810 4076997 -246610857 - MIR3 SINE MIR -17 191 8 259 320 150 10 chr2 4077281 4077481 -246610373 + MIR SINE MIR 32 259 -3 2298 124 0 0 chr2 4077681 4077987 -246609867 + AluSx SINE Alu 1 306 -6 2531 131 48 15 chr2 4078253 4078826 -246609028 + MER4E LTR ERV1 1 756 -10 2475 209 48 52 chr2 4079702 4080414 -246607440 + L1MD2 LINE L1 5650 6358 -1 2303 107 13 0 chr2 4080550 4080850 -246607004 - AluSx SINE Alu -4 308 5 237 351 0 11 chr2 4081168 4081262 -246606592 + (CA)n Simple_repeat Simple_repeat 2 94 0 247 316 94 0 chr2 4081769 4081886 -246605968 + L2 LINE L2 3140 3267 -5 243 0 0 0 chr2 4084290 4084317 -246603537 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 803 257 72 61 chr2 4085001 4085495 -246602359 + L1ME LINE L1 28 5189 -957 2284 105 0 0 chr2 4085582 4085868 -246601986 + AluSg SINE Alu 1 286 -24 393 75 0 0 chr2 4085871 4085924 -246601930 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1202 234 49 28 chr2 4085941 4086384 -246601470 + L1ME LINE L1 5188 5638 -528 718 341 63 14 chr2 4086751 4087246 -246600608 + HERV16 LTR ERVL 1765 2283 -3481 716 347 63 6 chr2 4087319 4087682 -246600172 + HERV16 LTR ERVL 2357 2740 -2256 349 309 18 18 chr2 4087809 4087919 -246599935 + HERV16 LTR ERVL 2953 3062 -1934 428 336 77 6 chr2 4087980 4088343 -246599511 + HERV16 LTR ERVL 3143 3531 -1954 2153 164 59 82 chr2 4089224 4089784 -246598070 - L1MA8 LINE L1 -17 6274 5728 2214 62 29 0 chr2 4090056 4090356 -246597498 - AluSg SINE Alu 0 308 1 487 249 40 57 chr2 4091100 4091277 -246596577 - MIR3 SINE MIR -1 207 34 253 274 38 28 chr2 4092481 4092587 -246595267 + HERV16 LTR ERVL 2046 2152 -2844 313 163 35 47 chr2 4094487 4094573 -246593281 + MIR SINE MIR 60 144 -118 786 61 0 0 chr2 4096349 4096448 -246591406 - THE1A LTR MaLR -256 99 1 855 226 79 39 chr2 4096589 4096868 -246590986 - L1MB2 LINE L1 -53 6118 5829 926 170 0 0 chr2 4096948 4097089 -246590765 + AluJb SINE Alu 1 141 -171 2313 108 0 0 chr2 4097094 4097390 -246590464 + AluY SINE Alu 1 296 -15 2228 49 0 0 chr2 4097421 4097708 -246590146 + L1PA8 LINE L1 5885 6171 -1 1195 149 0 0 chr2 4097786 4097960 -246589894 + AluJb SINE Alu 129 302 -10 230 290 86 11 chr2 4097972 4098065 -246589789 - MLT1D LTR MaLR 0 505 406 * 889 251 146 25 chr2 4098060 4098466 -246589388 - MLT1E2 LTR MaLR -154 470 9 364 334 58 8 chr2 4098495 4098785 -246589069 - L2 LINE L2 -220 3052 2687 2940 197 20 6 chr2 4101034 4101685 -246586169 + L1MB3 LINE L1 5520 6179 -4 251 228 0 0 chr2 4102145 4102202 -246585652 + L1MB7 LINE L1 5350 5406 -764 233 186 0 0 chr2 4102237 4102280 -246585574 + L1MB7 LINE L1 5364 5406 -764 225 209 0 0 chr2 4102319 4102362 -246585492 + L1MB7 LINE L1 5364 5406 -764 1133 195 8 7 chr2 4102402 4102656 -246585198 + L1MB7 LINE L1 5363 5585 -599 2299 116 0 26 chr2 4102671 4102725 -246585129 - L1PB1 LINE L1 -2 6149 6095 2323 114 0 0 chr2 4102725 4103031 -246584823 - AluSx SINE Alu -6 306 1 2299 116 0 26 chr2 4103031 4103354 -246584500 - L1PB1 LINE L1 -56 6095 5782 419 234 43 21 chr2 4103354 4103439 -246584415 + L1MC4 LINE L1 6614 6703 -1339 1270 73 0 6 chr2 4103439 4103616 -246584238 - L1PB1 LINE L1 -359 5792 5617 * 1798 251 38 36 chr2 4103611 4104015 -246583839 + L1MB7 LINE L1 5591 5998 -186 1704 122 35 52 chr2 4104015 4104301 -246583553 + AluJb SINE Alu 6 286 -26 1798 251 38 36 chr2 4104301 4104477 -246583377 + L1MB7 LINE L1 5998 6172 -12 2246 93 0 0 chr2 4104514 4104793 -246583061 - AluSc SINE Alu -30 279 1 506 237 0 0 chr2 4105544 4105798 -246582056 + (CA)n Simple_repeat Simple_repeat 1 254 0 195 250 0 0 chr2 4105822 4105922 -246581932 + (CA)n Simple_repeat Simple_repeat 1 100 0 336 222 3 45 chr2 4105970 4106351 -246581503 + (CA)n Simple_repeat Simple_repeat 1 364 0 200 275 17 6 chr2 4106406 4106584 -246581270 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 290 196 0 chr2 4107311 4107449 -246580405 - MIR SINE MIR -20 242 78 288 295 95 0 chr2 4109789 4109894 -246577960 + L2 LINE L2 3108 3222 -50 280 252 0 15 chr2 4111553 4111684 -246576170 + (CA)n Simple_repeat Simple_repeat 1 129 0 566 268 82 55 chr2 4112211 4112431 -246575423 + MIR SINE MIR 20 245 -17 353 336 34 0 chr2 4113911 4114060 -246573794 + MIR SINE MIR 58 211 -51 412 280 177 0 chr2 4114316 4114491 -246573363 + MIR SINE MIR 57 262 0 8801 101 4 4 chr2 4316166 4317449 -246370405 - L1P LINE L1 -1759 4387 3105 205 196 11 11 chr2 4317551 4317643 -246370211 + (CATTC)n Satellite Satellite 3 94 0 731 175 0 29 chr2 4317654 4318174 -246369680 + (CATTC)n Satellite Satellite 1 505 0 709 177 2 2 chr2 4318228 4318734 -246369120 + (CATTC)n Satellite Satellite 1 506 0 389 178 8 0 chr2 4318747 4318865 -246368989 + (CATTC)n Satellite Satellite 3 121 0 181 266 166 71 chr2 4319513 4319821 -246368033 - L3 LINE CR1 -246 1331 995 366 42 0 0 chr2 4319911 4319959 -246367895 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr2 4319996 4320034 -246367820 + AT_rich Low_complexity Low_complexity 1 38 0 422 264 4 16 chr2 4320058 4320301 -246367553 - L1MA9 LINE L1 -38 6274 5989 228 67 0 0 chr2 4320448 4320478 -246367376 + (TA)n Simple_repeat Simple_repeat 2 31 0 2242 108 0 0 chr2 4321161 4321458 -246366396 + AluSg SINE Alu 6 302 -8 27 29 0 0 chr2 4321458 4321492 -246366362 + AT_rich Low_complexity Low_complexity 1 34 0 290 247 47 12 chr2 4321759 4321844 -246366010 + MIR SINE MIR 104 191 -71 415 217 12 12 chr2 4321855 4321938 -246365916 + MER30 DNA MER1_type 148 230 0 265 312 35 29 chr2 4321955 4322128 -246365726 + L1MEc LINE L1 1908 2081 -4315 763 216 161 6 chr2 4322288 4322609 -246365245 - Tigger6 DNA MER2_type 0 1597 1148 11792 153 32 5 chr2 4322653 4322986 -246364868 + Tigger1 DNA MER2_type 1 324 -2094 2183 125 143 8 chr2 4322986 4323363 -246364491 + MSTA LTR MaLR 1 428 0 11792 153 32 5 chr2 4323363 4325009 -246362845 + Tigger1 DNA MER2_type 324 2033 -385 3554 194 28 14 chr2 4325110 4326333 -246361521 - L1MA9 LINE L1 -432 5880 4636 1651 174 57 3 chr2 4326333 4326615 -246361239 + AluSp SINE Alu 1 297 -16 3554 194 28 14 chr2 4326615 4326743 -246361111 - L1MA9 LINE L1 -1676 4636 4511 293 0 27 0 chr2 4326745 4326782 -246361072 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4582 17 0 0 chr2 4326782 4327304 -246360550 - L1PA2 LINE L1 -13 6142 5621 3081 15 0 0 chr2 4327304 4327691 -246360163 + L1PA2 LINE L1 5227 5613 -542 1227 183 28 37 chr2 4327687 4327882 -246359972 - L1MA9 LINE L1 -1624 4522 4330 * 2159 122 0 0 chr2 4327882 4328177 -246359677 + AluSx SINE Alu 11 305 -7 1227 183 28 37 chr2 4328177 4328303 -246359551 - L1MA9 LINE L1 -1816 4330 4204 368 241 127 16 chr2 4328511 4328756 -246359098 - L1M4 LINE L1 -3070 3076 2805 308 347 141 38 chr2 4329268 4329637 -246358217 - L2 LINE L2 -4 3268 2862 1711 164 66 101 chr2 4329847 4330273 -246357581 - MSTB LTR MaLR -15 411 1 359 352 73 24 chr2 4330859 4331106 -246356748 - L2 LINE L2 -468 2846 2588 1106 264 151 37 chr2 4331120 4331540 -246356314 + MLT2B1 LTR ERVL 3 482 -38 955 89 13 0 chr2 4331540 4331697 -246356157 + (TCTA)n Simple_repeat Simple_repeat 4 162 0 1106 264 151 37 chr2 4331697 4331741 -246356113 + MLT2B1 LTR ERVL 482 520 0 3531 176 42 90 chr2 4332094 4333365 -246354489 + L1PB3 LINE L1 4942 6154 0 2185 92 0 7 chr2 4334314 4334608 -246353246 + AluSc SINE Alu 1 292 -17 249 378 44 7 chr2 4335223 4335358 -246352496 + MIR SINE MIR 46 185 -77 206 62 31 0 chr2 4335554 4335586 -246352268 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 243 136 45 0 chr2 4335587 4335631 -246352223 - MER5B DNA MER1_type -132 46 1 327 280 64 45 chr2 4335659 4335816 -246352038 - MER105 DNA DNA -1 203 44 457 282 48 62 chr2 4335880 4336089 -246351765 + MER63A DNA MER1_type 2 207 -3 200 322 67 22 chr2 4336662 4336752 -246351102 + L3 LINE CR1 1169 1262 -315 432 294 32 24 chr2 4336854 4336980 -246350874 + L3 LINE CR1 1450 1576 -1 607 116 45 18 chr2 4337349 4337461 -246350393 + L1PB2 LINE L1 5677 5791 -360 254 160 13 53 chr2 4337573 4337648 -246350206 + (TA)n Simple_repeat Simple_repeat 1 72 0 2175 97 54 26 chr2 4337649 4337998 -246349856 + L1PB2 LINE L1 5789 6147 -4 1698 130 85 4 chr2 4338627 4338897 -246348957 - AluSx SINE Alu -12 300 9 315 273 0 0 chr2 4339354 4339431 -246348423 - L1MC4 LINE L1 -1350 6692 6616 27 29 0 0 chr2 4339464 4339498 -246348356 + AT_rich Low_complexity Low_complexity 1 34 0 184 344 16 88 chr2 4339561 4339686 -246348168 - MIR SINE MIR -59 149 34 24 32 0 0 chr2 4340329 4340360 -246347494 + AT_rich Low_complexity Low_complexity 1 31 0 207 315 82 86 chr2 4341629 4341896 -246345958 + L2 LINE L2 2228 2493 -821 229 316 158 8 chr2 4341962 4342095 -246345759 - MIR SINE MIR 0 262 110 234 354 85 0 chr2 4342287 4342369 -246345485 - L2 LINE L2 -12 3260 3172 27 0 0 0 chr2 4343928 4343955 -246343899 + AT_rich Low_complexity Low_complexity 1 27 0 6776 70 13 1 chr2 4344928 4346499 -246341355 - L1PA7 LINE L1 -4 6150 4564 16969 29 0 0 chr2 4346599 4349383 -246338471 + L1PA2 LINE L1 3372 6155 0 29 47 0 0 chr2 4349764 4349807 -246338047 + AT_rich Low_complexity Low_complexity 1 43 0 190 308 199 13 chr2 4350272 4350428 -246337426 + MIR SINE MIR 37 221 -41 220 363 12 0 chr2 4350664 4350744 -246337110 - L2 LINE L2 -212 3060 2980 1533 200 64 6 chr2 4352241 4352586 -246335268 + MLT2D LTR ERVL 1 365 -49 280 228 51 13 chr2 4353554 4353633 -246334221 + MIR SINE MIR 110 191 -71 944 270 58 70 chr2 4354149 4354649 -246333205 + MLT1L LTR MaLR 79 572 -43 792 253 13 17 chr2 4355134 4355367 -246332487 - MER72 LTR ERV1 -243 479 248 206 313 50 38 chr2 4357001 4357081 -246330773 - L2 LINE L2 -5 3267 3187 289 258 0 0 chr2 4357512 4357605 -246330249 - Charlie7 DNA MER1_type -1937 675 583 435 218 122 20 chr2 4357670 4357817 -246330037 - Charlie7 DNA MER1_type -2130 482 321 23 78 0 0 chr2 4357954 4358005 -246329849 + AT_rich Low_complexity Low_complexity 1 51 0 357 314 47 23 chr2 4358779 4358951 -246328903 + MIR SINE MIR 28 203 -59 875 254 6 0 chr2 4359698 4359879 -246327975 + MER5A DNA MER1_type 8 189 0 224 254 51 0 chr2 4360347 4360406 -246327448 - MIR SINE MIR -55 153 92 34 65 0 0 chr2 4360760 4360822 -246327032 + AT_rich Low_complexity Low_complexity 1 62 0 214 278 11 78 chr2 4360876 4360966 -246326888 + L2 LINE L2 3189 3272 0 1492 204 6 19 chr2 4362282 4362595 -246325259 - AluJb SINE Alu -1 311 3 255 247 78 26 chr2 4362635 4362712 -246325142 - MIR SINE MIR -179 83 3 255 321 46 30 chr2 4362834 4362965 -246324889 + MIR SINE MIR 99 231 -31 279 315 94 26 chr2 4365465 4365732 -246322122 - L1MEc LINE L1 -4579 1817 1533 675 212 0 0 chr2 4365753 4365871 -246321983 + FLAM_C SINE Alu 1 118 -15 319 270 86 40 chr2 4366016 4366190 -246321664 - L1M4 LINE L1 -2281 3865 3684 337 320 99 41 chr2 4366276 4366641 -246321213 - L1M4 LINE L1 -2642 3504 3119 289 289 41 38 chr2 4367154 4367420 -246320434 - L1M4 LINE L1 -3523 2623 2357 457 341 102 23 chr2 4369458 4369939 -246317915 - L1ME4a LINE L1 -24 6097 5579 1109 254 0 0 chr2 4370018 4370258 -246317596 + MLT1A1 LTR MaLR 125 364 -1 2131 155 111 5 chr2 4370413 4370800 -246317054 - MSTA LTR MaLR 0 428 1 8336 193 25 11 chr2 4370800 4372429 -246315425 - MSTA-int LTR MaLR 0 1651 1 1562 202 141 5 chr2 4372429 4372806 -246315048 - MSTA LTR MaLR 0 428 1 3523 278 49 43 chr2 4374363 4374423 -246313431 + L1M4 LINE L1 11 69 -6786 1572 206 0 3 chr2 4374423 4374735 -246313119 - AluJo SINE Alu 0 311 1 3523 278 49 43 chr2 4374735 4376423 -246311431 + L1M4 LINE L1 69 1792 -5063 1035 242 50 108 chr2 4376430 4377608 -246310246 + L1M4 LINE L1 2230 3265 -3692 1131 256 99 11 chr2 4377754 4377801 -246310053 + L1M4 LINE L1 3245 3286 -3671 4195 39 8 2 chr2 4377801 4378341 -246309513 + L1PA4 LINE L1 5621 6163 0 1131 256 99 11 chr2 4378341 4378816 -246309038 + L1M4 LINE L1 3286 3814 -3143 2727 225 19 0 chr2 4378879 4379391 -246308463 + L1P4 LINE L1 53 574 -6265 * 3594 228 50 27 chr2 4379380 4380536 -246307318 + L1P4 LINE L1 1849 3031 -3818 4035 203 48 14 chr2 4380536 4380805 -246307049 + L1P4 LINE L1 4935 5193 -1671 1825 176 80 5 chr2 4380805 4381203 -246306651 + MSTA LTR MaLR 1 428 0 4035 203 48 14 chr2 4381203 4382124 -246305730 + L1P4 LINE L1 5193 6163 -701 5011 148 17 1 chr2 4382224 4383057 -246304797 + L1PA16 LINE L1 5312 6157 -9 444 311 12 38 chr2 4383079 4383504 -246304350 + L1M4 LINE L1 3866 4279 -2678 2684 36 0 3 chr2 4383723 4384032 -246303822 - AluY SINE Alu -3 308 1 3987 20 0 0 chr2 4384423 4384881 -246302973 - L1PA3 LINE L1 0 6155 5698 5105 30 0 0 chr2 4384881 4385505 -246302349 + L1P LINE L1 4749 5372 -774 3297 137 32 35 chr2 4386068 4386668 -246301186 - Tigger1 DNA MER2_type 0 2418 1821 1585 85 89 4 chr2 4387535 4387781 -246300073 - L1PA11 LINE L1 -10 6164 5898 5661 156 60 9 chr2 4387781 4387896 -246299958 - Tigger1 DNA MER2_type -581 1837 1729 207 0 0 0 chr2 4387896 4387919 -246299935 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5661 156 60 9 chr2 4387919 4389504 -246298350 - Tigger1 DNA MER2_type -689 1729 1 1651 201 3 7 chr2 4389537 4389835 -246298019 - AluJo SINE Alu -15 297 1 565 278 91 13 chr2 4390131 4390361 -246297493 - MLT1D LTR MaLR 0 505 258 307 294 134 21 chr2 4390475 4390669 -246297185 - LTR33 LTR ERVL -1 520 305 808 219 18 0 chr2 4390849 4391013 -246296841 - FRAM SINE Alu -9 167 1 241 295 79 43 chr2 4393249 4393388 -246294466 + L2 LINE L2 3128 3271 -1 317 185 64 25 chr2 4393428 4393585 -246294269 + (TG)n Simple_repeat Simple_repeat 1 163 0 216 47 78 47 chr2 4393595 4393659 -246294195 + (GTGTG)n Simple_repeat Simple_repeat 4 69 0 482 131 48 51 chr2 4393715 4394008 -246293846 + (GTGTG)n Simple_repeat Simple_repeat 1 292 0 437 97 30 67 chr2 4394021 4394186 -246293668 + (GTGTG)n Simple_repeat Simple_repeat 1 159 0 1135 218 44 21 chr2 4394694 4395028 -246292826 - MLT1A1 LTR MaLR -6 359 3 3801 182 14 7 chr2 4395116 4395826 -246292028 - MER72 LTR ERV1 0 722 8 332 133 84 12 chr2 4396746 4396829 -246291025 - L1P LINE L1 -2914 3232 3144 21 36 0 0 chr2 4396963 4396991 -246290863 + AT_rich Low_complexity Low_complexity 1 28 0 435 294 91 67 chr2 4397301 4397879 -246289975 - L1MC4 LINE L1 0 8042 7311 670 217 88 17 chr2 4397901 4398223 -246289631 + MLT1C LTR MaLR 1 373 -94 228 135 19 58 chr2 4398227 4398279 -246289575 + MLT1C LTR MaLR 336 385 -5 2814 131 7 0 chr2 4398284 4398711 -246289143 + MER57B LTR ERV1 5 434 0 234 261 143 62 chr2 4398755 4398916 -246288938 - L1MC4a LINE L1 -470 7338 7165 687 291 82 12 chr2 4399183 4399513 -246288341 - L1MC4 LINE L1 -985 7057 6705 1878 114 0 84 chr2 4400077 4400420 -246287434 - AluSx SINE Alu 0 317 1 748 221 63 0 chr2 4402565 4402723 -246285131 - FAM SINE Alu -7 168 1 357 222 28 46 chr2 4403140 4403248 -246284606 + MIR3 SINE MIR 97 202 -6 284 330 31 10 chr2 4403398 4403495 -246284359 + L2 LINE L2 3188 3286 -27 403 323 64 30 chr2 4404114 4404380 -246283474 - L1MEc LINE L1 -1800 4415 4141 654 304 48 23 chr2 4404504 4405069 -246282785 - L1MEc LINE L1 -2708 3507 2929 631 297 42 0 chr2 4405091 4405256 -246282598 + MER5A DNA MER1_type 4 175 -14 276 340 55 12 chr2 4405357 4405610 -246282244 - L1MEc LINE L1 -3427 2788 2525 2872 229 74 6 chr2 4405640 4406705 -246281149 - L1MB8 LINE L1 -14 6164 5027 31 0 0 0 chr2 4406708 4406739 -246281115 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 117 10 chr2 4406769 4407256 -246280598 - L1MB8 LINE L1 -3486 2660 2122 517 269 39 6 chr2 4407310 4407466 -246280388 - L1MEc LINE L1 -4670 1726 1566 30 77 0 0 chr2 4408875 4408940 -246278914 + AT_rich Low_complexity Low_complexity 1 65 0 355 258 106 26 chr2 4409300 4409451 -246278403 - L1MEc LINE L1 -4913 1292 1130 2684 98 8 11 chr2 4409463 4409839 -246278015 - THE1C LTR MaLR 0 375 1 6831 113 39 137 chr2 4409866 4410728 -246277126 - THE1C-int LTR MaLR -303 1277 607 412 126 0 105 chr2 4410728 4410823 -246277031 - L1PA10 LINE L1 0 6168 6084 6831 113 39 137 chr2 4410823 4411376 -246276478 - THE1C-int LTR MaLR -973 607 1 2390 133 30 11 chr2 4411376 4411744 -246276110 - THE1C LTR MaLR 0 375 1 385 274 73 66 chr2 4411985 4412244 -246275610 - L1MEc LINE L1 -5278 927 667 2421 178 24 2 chr2 4412398 4412815 -246275039 + MSTB LTR MaLR 1 426 0 1226 225 107 24 chr2 4413593 4413931 -246273923 + MLT1B LTR MaLR 1 366 -24 1106 226 13 57 chr2 4413939 4414240 -246273614 + MLT1A2 LTR MaLR 74 361 -13 2327 110 0 0 chr2 4414511 4414821 -246273033 - AluSx SINE Alu -2 310 1 606 315 36 9 chr2 4415014 4415233 -246272621 - MIR SINE MIR -32 230 6 276 77 0 0 chr2 4416432 4416471 -246271383 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 215 329 89 13 chr2 4418222 4418301 -246269553 + MIR SINE MIR 25 109 -153 272 309 9 27 chr2 4419598 4419708 -246268146 - MLT1F LTR MaLR -82 460 353 521 252 65 0 chr2 4419791 4419930 -246267924 + MSTD LTR MaLR 1 148 -217 668 178 17 0 chr2 4419961 4420079 -246267775 + MSTD LTR MaLR 265 384 -12 429 320 35 58 chr2 4420158 4420417 -246267437 + MIR SINE MIR 10 262 0 200 294 11 43 chr2 4421352 4421536 -246266318 + (CATG)n Simple_repeat Simple_repeat 1 178 0 188 229 42 0 chr2 4423646 4423694 -246264160 - MIR3 SINE MIR -39 169 120 198 103 0 0 chr2 4424109 4424138 -246263716 + (TC)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr2 4424191 4424226 -246263628 + (CA)n Simple_repeat Simple_repeat 2 36 0 1924 186 38 22 chr2 4424995 4425442 -246262412 - L1MA8 LINE L1 -6 6285 5832 2183 157 10 15 chr2 4425442 4425831 -246262023 + L1MA8 LINE L1 5450 5836 -476 1670 146 143 32 chr2 4425914 4426257 -246261597 + MSTA LTR MaLR 19 399 -29 288 0 0 0 chr2 4426257 4426289 -246261565 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5279 91 5 11 chr2 4426289 4427040 -246260814 - L1PA8 LINE L1 -11 6161 5415 525 77 0 0 chr2 4427518 4427583 -246260271 - MER30B DNA MER1_type -125 65 1 342 0 0 0 chr2 4427763 4427801 -246260053 + (TA)n Simple_repeat Simple_repeat 2 39 0 182 292 0 0 chr2 4429841 4429889 -246257965 + L2 LINE L2 3210 3257 -15 1831 214 82 52 chr2 4430568 4430676 -246257178 - L1ME1 LINE L1 -237 5998 5895 1951 125 3 30 chr2 4430676 4430972 -246256882 - AluSx SINE Alu -7 305 18 1831 214 82 52 chr2 4430972 4431426 -246256428 - L1ME1 LINE L1 -340 5895 5456 1925 148 0 0 chr2 4431426 4431732 -246256122 - AluSx SINE Alu 0 306 1 1831 214 82 52 chr2 4431732 4432112 -246255742 - L1ME1 LINE L1 -779 5456 5012 1151 279 38 18 chr2 4432108 4432656 -246255198 - L1ME1 LINE L1 -1647 4568 4010 * 274 269 19 28 chr2 4433030 4433138 -246254716 - L1M4 LINE L1 -969 5177 5071 2831 274 66 37 chr2 4433399 4435183 -246252671 - L1ME1 LINE L1 -2309 3906 2063 315 49 0 0 chr2 4435183 4435224 -246252630 + (TG)n Simple_repeat Simple_repeat 2 42 0 2831 274 66 37 chr2 4435224 4436342 -246251512 - L1ME1 LINE L1 -4152 2063 979 358 324 41 82 chr2 4436364 4436805 -246251049 - L1ME1 LINE L1 -5453 943 521 184 185 37 0 chr2 4438422 4438476 -246249378 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2239 108 3 0 chr2 4438815 4439112 -246248742 + AluSx SINE Alu 1 298 -14 465 342 129 32 chr2 4439413 4440243 -246247611 - L2 LINE L2 -653 2661 1752 286 278 35 28 chr2 4440371 4440515 -246247339 + L1MB8 LINE L1 93 237 -6622 305 301 65 75 chr2 4441002 4441188 -246246666 + L1MB8 LINE L1 1253 1436 -5511 1603 161 68 37 chr2 4441253 4441577 -246246277 + MER1B DNA MER1_type 4 337 0 1500 288 87 23 chr2 4441600 4442360 -246245494 + L1MB8 LINE L1 1380 2209 -4750 1805 167 7 10 chr2 4442360 4442660 -246245194 + AluJo SINE Alu 1 299 -13 1500 288 87 23 chr2 4442660 4442804 -246245050 + L1MB8 LINE L1 2209 2342 -4617 192 125 0 0 chr2 4442927 4442959 -246244895 + (CA)n Simple_repeat Simple_repeat 1 32 0 1497 270 80 32 chr2 4443100 4444372 -246243482 + L1MB8 LINE L1 2619 3927 -3030 * 1988 212 75 8 chr2 4444350 4444873 -246242981 + L1MB8 LINE L1 6197 6754 -235 1791 137 0 50 chr2 4444939 4445267 -246242587 - AluSq SINE Alu 0 313 1 2330 99 3 3 chr2 4446931 4447235 -246240619 + AluSp SINE Alu 1 304 -9 226 272 150 27 chr2 4447546 4447693 -246240161 + MIR SINE MIR 73 237 -25 342 247 139 38 chr2 4447977 4448135 -246239719 - MIR SINE MIR -42 220 47 1807 231 73 47 chr2 4448140 4448756 -246239098 + L1MC3 LINE L1 7153 7784 -1 2007 99 21 18 chr2 4449108 4449430 -246238424 + AluSg SINE Alu 1 323 0 857 161 61 11 chr2 4449533 4449713 -246238141 - L1MA8 LINE L1 -100 6191 6003 359 294 73 34 chr2 4450871 4451048 -246236806 - MIR SINE MIR 0 262 79 481 55 27 0 chr2 4451078 4451151 -246236703 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1268 219 91 17 chr2 4451210 4451561 -246236293 - MLT2C1 LTR ERVL -20 377 1 1653 210 3 0 chr2 4451839 4452130 -246235724 + AluJo SINE Alu 1 292 -20 306 314 0 0 chr2 4452135 4452221 -246235633 - L1MC4 LINE L1 -1343 6699 6614 204 200 0 0 chr2 4452225 4452270 -246235584 + (TA)n Simple_repeat Simple_repeat 1 45 0 1108 192 39 13 chr2 4452297 4452526 -246235328 - MER46A DNA MER2_type -1 235 1 2032 154 3 0 chr2 4452729 4453034 -246234820 + AluSq SINE Alu 1 306 -7 356 250 21 21 chr2 4453035 4453175 -246234679 - L1MC4 LINE L1 -1 8041 7902 248 245 0 0 chr2 4453176 4453229 -246234625 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 239 214 0 0 chr2 4453229 4453285 -246234569 - L1MC4 LINE L1 -1339 6703 6648 472 248 18 69 chr2 4453318 4453550 -246234304 - L1MC4 LINE L1 -100 7708 7585 218 289 0 24 chr2 4455217 4455300 -246232554 + CT-rich Low_complexity Low_complexity 2 82 0 569 362 138 23 chr2 4455332 4455673 -246232181 - L2 LINE L2 -2064 1250 829 1307 137 64 0 chr2 4455673 4455892 -246231962 - L1PA11 LINE L1 -2 6172 5940 569 362 138 23 chr2 4455892 4456064 -246231790 - L2 LINE L2 -2485 829 678 1605 181 6 33 chr2 4456476 4456549 -246231305 - L1MC2 LINE L1 -16 6328 6255 2254 118 37 11 chr2 4456549 4456904 -246230950 + THE1B LTR MaLR 1 364 0 1605 181 6 33 chr2 4456904 4457162 -246230692 - L1MC2 LINE L1 -89 6255 6006 508 286 158 22 chr2 4457344 4457655 -246230199 + LTR16A LTR ERVL 93 445 -5 888 186 0 13 chr2 4458103 4458259 -246229595 - FRAM SINE Alu -17 159 6 300 191 0 44 chr2 4459649 4459785 -246228069 + (TA)n Simple_repeat Simple_repeat 2 131 0 1584 207 13 10 chr2 4462003 4462303 -246225551 + AluJb SINE Alu 1 301 -11 24 0 0 0 chr2 4462620 4462644 -246225210 + AT_rich Low_complexity Low_complexity 1 24 0 1944 152 39 17 chr2 4462671 4463027 -246224827 - THE1B LTR MaLR 0 364 1 1592 127 0 9 chr2 4463818 4464047 -246223807 - AluSg/x SINE Alu -8 302 76 888 258 24 0 chr2 4464539 4464748 -246223106 + MER20 DNA MER1_type 6 219 0 458 227 47 7 chr2 4465292 4465442 -246222412 + Charlie5 DNA MER1_type 2469 2624 0 306 0 0 0 chr2 4466074 4466108 -246221746 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 529 217 83 64 chr2 4466109 4466266 -246221588 + AluJb SINE Alu 136 295 -17 1645 121 22 0 chr2 4471025 4471256 -246216598 - AluSx SINE Alu -14 298 63 246 273 175 13 chr2 4472149 4472303 -246215551 - L1MC2 LINE L1 -2055 5753 5575 337 278 151 50 chr2 4472380 4472818 -246215036 + L1M4 LINE L1 3346 3863 -2283 2144 110 0 23 chr2 4472818 4473126 -246214728 + AluSg SINE Alu 1 301 -9 337 278 151 50 chr2 4473126 4473291 -246214563 + L1M4 LINE L1 3863 4010 -2136 224 209 0 0 chr2 4475144 4475187 -246212667 + GA-rich Low_complexity Low_complexity 1 43 0 2342 206 49 0 chr2 4475224 4475715 -246212139 - MLT2B2 LTR ERVL 0 515 1 180 125 0 0 chr2 4475939 4475971 -246211883 + (A)n Simple_repeat Simple_repeat 1 32 0 334 310 78 49 chr2 4476078 4476362 -246211492 - L1MC4a LINE L1 -1849 5959 5668 202 296 70 0 chr2 4476705 4476776 -246211078 - MIR SINE MIR -165 97 22 23 0 0 0 chr2 4477246 4477269 -246210585 + AT_rich Low_complexity Low_complexity 1 23 0 2385 96 0 0 chr2 4478427 4478729 -246209125 - AluSg SINE Alu -8 302 1 2088 150 0 0 chr2 4479835 4480135 -246207719 - AluSx SINE Alu -11 301 2 195 42 0 0 chr2 4481311 4481335 -246206519 + (T)n Simple_repeat Simple_repeat 1 24 0 336 209 77 44 chr2 4481564 4481655 -246206199 - L2 LINE L2 -20 3252 3159 227 360 12 12 chr2 4481825 4481911 -246205943 + L2 LINE L2 3227 3312 -1 206 327 72 39 chr2 4482200 4482408 -246205446 - L2 LINE L2 -1 3312 3098 488 205 60 30 chr2 4482731 4482897 -246204957 - MER58C DNA MER1_type -16 199 29 209 196 0 22 chr2 4482990 4483036 -246204818 + CT-rich Low_complexity Low_complexity 3 47 0 242 292 35 53 chr2 4483471 4483584 -246204270 + MIR SINE MIR 46 156 -106 4459 228 75 92 chr2 4484213 4487104 -246200750 + L1ME3A LINE L1 2194 5035 -1111 357 251 18 90 chr2 4487120 4487242 -246200612 + L1ME3A LINE L1 5772 5880 -290 1804 187 7 0 chr2 4487242 4487547 -246200307 + AluJb SINE Alu 1 307 -5 357 251 18 90 chr2 4487547 4487591 -246200263 + L1ME3A LINE L1 5880 5926 -244 556 228 122 6 chr2 4488216 4488396 -246199458 + MLT1J LTR MaLR 1 201 -310 244 252 205 39 chr2 4488711 4488838 -246199016 + MLT1J LTR MaLR 356 503 -8 426 307 95 35 chr2 4489464 4489780 -246198074 + LTR16C LTR ERVL 146 480 -11 27 0 0 0 chr2 4489813 4489840 -246198014 + AT_rich Low_complexity Low_complexity 1 27 0 189 309 81 24 chr2 4490192 4490315 -246197539 - MIR SINE MIR -14 248 119 2478 108 8 5 chr2 4490702 4491073 -246196781 - L1PA14 LINE L1 -3 6158 5787 283 315 72 9 chr2 4491086 4491197 -246196657 - MIR SINE MIR -60 148 31 200 208 0 38 chr2 4491365 4491418 -246196436 + CT-rich Low_complexity Low_complexity 4 54 0 221 307 94 45 chr2 4491638 4491882 -246195972 - L2 LINE L2 -354 2960 2705 192 356 87 67 chr2 4492282 4492535 -246195319 + L2 LINE L2 2953 3210 -62 306 294 61 81 chr2 4494231 4494428 -246193426 - MIR3 SINE MIR -9 199 7 28 0 0 0 chr2 4494436 4494464 -246193390 + AT_rich Low_complexity Low_complexity 1 28 0 202 283 0 0 chr2 4494614 4494674 -246193180 + (CATA)n Simple_repeat Simple_repeat 3 62 0 443 339 155 13 chr2 4494717 4495092 -246192762 - L3 LINE CR1 -112 1465 1038 351 0 0 0 chr2 4495196 4495235 -246192619 + (CA)n Simple_repeat Simple_repeat 2 40 0 182 262 107 0 chr2 4495429 4495513 -246192341 - L3 LINE CR1 -858 719 627 29 28 0 0 chr2 4495604 4495640 -246192214 + AT_rich Low_complexity Low_complexity 1 36 0 7904 94 0 0 chr2 4496153 4497246 -246190608 - L1P3 LINE L1 -4788 1673 581 6912 109 7 12 chr2 4497243 4498342 -246189512 + L1P LINE L1 1936 3029 -3117 * 2930 176 4 13 chr2 4498636 4499181 -246188673 - L1PA16 LINE L1 -10 6156 5617 2430 174 70 42 chr2 4499225 4499547 -246188307 - MLT2B3 LTR ERVL -8 546 202 207 0 0 0 chr2 4499547 4499570 -246188284 + (GA)n Simple_repeat Simple_repeat 2 24 0 2430 174 70 42 chr2 4499570 4499777 -246188077 - MLT2B3 LTR ERVL -352 202 2 3663 245 31 27 chr2 4499804 4501535 -246186319 + L1MB7 LINE L1 3997 5754 -430 559 77 26 0 chr2 4501535 4501613 -246186241 + MADE1 DNA Mariner 1 80 0 3663 245 31 27 chr2 4501613 4501946 -246185908 + L1MB7 LINE L1 5754 6084 -100 319 323 90 26 chr2 4502375 4502564 -246185290 + MIR SINE MIR 11 211 -51 419 291 99 6 chr2 4502728 4502910 -246184944 - LTR50 LTR ERVL -126 669 471 466 246 123 45 chr2 4502980 4503224 -246184630 - LTR50 LTR ERVL -532 263 1 1874 159 11 0 chr2 4503463 4503746 -246184108 + AluSx SINE Alu 1 286 -26 3914 157 24 10 chr2 4503995 4504708 -246183146 + MER50 LTR ERV1 1 723 -11 689 297 53 28 chr2 4504813 4505210 -246182644 + LTR16B LTR ERVL 37 443 -21 3384 200 67 4 chr2 4505261 4506037 -246181817 - L1MB8 LINE L1 -6 6172 5348 1403 147 0 32 chr2 4506073 4506291 -246181563 - AluSg/x SINE Alu -16 296 86 273 226 0 0 chr2 4506291 4506344 -246181510 - L1M4b LINE L1 -5898 961 909 471 218 0 10 chr2 4506353 4506454 -246181400 + Tigger2a DNA MER2_type 1 100 -334 2042 234 102 22 chr2 4506454 4507124 -246180730 - MER50 LTR ERV1 0 734 12 2105 149 6 3 chr2 4507128 4507478 -246180376 + Tigger2a DNA MER2_type 94 444 0 757 305 59 25 chr2 4507489 4507896 -246179958 - L1M4b LINE L1 -5968 891 471 444 282 169 23 chr2 4507934 4508200 -246179654 - L1M4b LINE L1 -6480 379 75 243 304 29 0 chr2 4508671 4508740 -246179114 - MIR3 SINE MIR -27 181 111 342 256 277 0 chr2 4508972 4509109 -246178745 + MER5B DNA MER1_type 1 175 -3 269 303 111 0 chr2 4509923 4510022 -246177832 - MIR SINE MIR -61 147 38 236 309 48 40 chr2 4510046 4510172 -246177682 + L2 LINE L2 3144 3270 -2 435 343 48 6 chr2 4510492 4510658 -246177196 + MER5B DNA MER1_type 6 178 0 758 154 155 2 chr2 4512653 4512876 -246174978 + L1MA9 LINE L1 6055 6312 0 2152 102 78 90 chr2 4512969 4513402 -246174452 + MSTA LTR MaLR 1 428 0 333 118 0 0 chr2 4513502 4513513 -246174341 + (TG)n Simple_repeat Simple_repeat 1 62 0 333 118 0 0 chr2 4513513 4513564 -246174290 + (TG)n Simple_repeat Simple_repeat 2 52 0 492 311 53 21 chr2 4514823 4515013 -246172841 - MIR SINE MIR -44 218 23 2576 162 80 53 chr2 4515135 4515722 -246172132 - MER6A DNA MER2_type 0 605 3 636 270 76 8 chr2 4515968 4516176 -246171678 - MIR SINE MIR -49 213 1 21 0 0 0 chr2 4516418 4516439 -246171415 + AT_rich Low_complexity Low_complexity 1 21 0 286 286 29 6 chr2 4517739 4517914 -246169940 + (TA)n Simple_repeat Simple_repeat 2 180 0 207 0 0 0 chr2 4518042 4518065 -246169789 + (A)n Simple_repeat Simple_repeat 1 23 0 2053 121 16 7 chr2 4518331 4518660 -246169194 + AluSx SINE Alu 1 312 0 328 299 142 0 chr2 4518757 4518891 -246168963 - MIR SINE MIR -5 257 105 223 200 17 17 chr2 4518916 4518976 -246168878 + T-rich Low_complexity Low_complexity 1 60 0 29 47 0 0 chr2 4519566 4519609 -246168245 + AT_rich Low_complexity Low_complexity 1 43 0 2593 40 0 0 chr2 4521392 4521689 -246166165 - AluY SINE Alu -14 297 1 351 107 40 0 chr2 4522418 4522493 -246165361 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 39 0 0 chr2 4522993 4523019 -246164835 + (T)n Simple_repeat Simple_repeat 1 26 0 1165 225 40 25 chr2 4523093 4523418 -246164436 - MER93a LTR ERV1 -10 392 63 336 167 0 0 chr2 4523526 4523598 -246164256 + T-rich Low_complexity Low_complexity 1 72 0 241 466 8 0 chr2 4524210 4524328 -246163526 + L2 LINE L2 3141 3259 -13 33 25 0 0 chr2 4524721 4524761 -246163093 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 4524961 4524983 -246162871 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 4526203 4526225 -246161629 + AT_rich Low_complexity Low_complexity 1 22 0 2542 62 0 0 chr2 4526871 4527180 -246160674 - AluY SINE Alu -2 309 1 197 143 29 0 chr2 4527757 4527792 -246160062 + L2 LINE L2 3216 3251 -21 755 279 101 13 chr2 4527895 4528211 -246159643 - MLT1A1 LTR MaLR -2 363 20 317 248 8 0 chr2 4528460 4528589 -246159265 + (TG)n Simple_repeat Simple_repeat 1 130 0 180 217 0 0 chr2 4528631 4528677 -246159177 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr2 4529544 4529569 -246158285 + AT_rich Low_complexity Low_complexity 1 25 0 190 360 73 40 chr2 4529613 4529763 -246158091 + MIR3 SINE MIR 22 176 -32 2729 229 30 30 chr2 4529938 4530775 -246157079 - L1MD1 LINE L1 -2 6240 5404 1187 186 11 30 chr2 4530777 4531041 -246156813 + MLT1B LTR MaLR 3 261 -129 710 109 0 10 chr2 4581043 4581144 -246106710 - AluS SINE Alu -212 101 2 514 271 65 28 chr2 4581217 4581431 -246106423 - MIR SINE MIR -1 261 40 1732 175 14 14 chr2 4581631 4581928 -246105926 - AluJb SINE Alu -15 297 1 2085 166 48 45 chr2 4583847 4584203 -246103651 + LTR18A LTR ERVL 1 357 0 2295 12 0 0 chr2 4584652 4584902 -246102952 + AluYa5 SINE Alu 62 311 0 181 125 42 28 chr2 4585150 4585222 -246102632 + (TA)n Simple_repeat Simple_repeat 1 73 0 229 165 39 10 chr2 4585266 4585369 -246102485 + (TA)n Simple_repeat Simple_repeat 2 107 0 28 0 0 0 chr2 4585444 4585472 -246102382 + AT_rich Low_complexity Low_complexity 1 28 0 222 121 0 121 chr2 4586666 4586724 -246101130 + L2 LINE L2 3222 3272 0 272 212 61 0 chr2 4586768 4586781 -246101073 + MER3 DNA MER1_type 32 48 -161 612 204 32 51 chr2 4586781 4586938 -246100916 - MER3 DNA MER1_type 0 209 56 3571 75 23 0 chr2 4588783 4589226 -246098628 - MLT2A2 LTR ERVL 0 453 1 37 76 0 0 chr2 4589373 4589452 -246098402 + AT_rich Low_complexity Low_complexity 1 79 0 190 205 26 0 chr2 4589462 4589540 -246098314 + (TA)n Simple_repeat Simple_repeat 2 81 0 34 0 0 0 chr2 4589540 4589574 -246098280 + AT_rich Low_complexity Low_complexity 1 34 0 504 171 29 6 chr2 4589613 4589788 -246098066 + (TA)n Simple_repeat Simple_repeat 1 179 0 2929 203 83 36 chr2 4591067 4591504 -246096350 - L1MB3 LINE L1 -28 6155 5740 2480 68 0 7 chr2 4591504 4591813 -246096041 + AluY SINE Alu 1 307 -4 309 51 0 0 chr2 4591815 4591854 -246096000 + (TA)n Simple_repeat Simple_repeat 1 39 0 2929 203 83 36 chr2 4591854 4592137 -246095717 - L1MB3 LINE L1 -443 5740 5398 411 336 61 40 chr2 4593814 4594052 -246093802 + L2 LINE L2 2447 2698 -616 1926 152 146 16 chr2 4594052 4594428 -246093426 + MSTA LTR MaLR 2 426 -2 411 336 61 40 chr2 4594428 4594585 -246093269 + L2 LINE L2 2698 2850 -464 284 323 108 36 chr2 4594579 4594830 -246093024 + L2 LINE L2 3045 3313 0 * 2461 56 10 0 chr2 4595566 4595872 -246091982 - AluY SINE Alu -2 309 1 312 270 0 63 chr2 4596217 4596328 -246091526 - MLT1J2 LTR MaLR -2 448 345 247 353 12 0 chr2 4596714 4596799 -246091055 + MIR3 SINE MIR 92 177 -31 832 244 0 28 chr2 4597169 4597382 -246090472 - MER58A DNA MER1_type -15 209 3 419 86 69 43 chr2 4597527 4597643 -246090211 + CT-rich Low_complexity Low_complexity 2 120 0 1012 155 0 0 chr2 4597651 4597799 -246090055 - AluSg/x SINE Alu -32 280 133 1281 188 68 12 chr2 4597799 4598106 -246089748 - L1MA8 LINE L1 -52 6239 5937 797 205 206 23 chr2 4598202 4598654 -246089200 - MLT1F1 LTR MaLR -6 561 1 1726 177 10 7 chr2 4600267 4600572 -246087282 - AluSx SINE Alu -6 306 1 1585 173 78 0 chr2 4600610 4600893 -246086961 + AluSg SINE Alu 1 305 -5 258 244 213 8 chr2 4601001 4601128 -246086726 + L2 LINE L2 3161 3313 0 331 239 0 80 chr2 4605283 4605371 -246082483 + L2 LINE L2 3224 3304 -9 1598 225 76 57 chr2 4605907 4606428 -246081426 + MLT2B3 LTR ERVL 1 487 -33 3591 178 60 33 chr2 4606653 4607417 -246080437 + LTR1 LTR ERV1 1 785 0 208 330 96 0 chr2 4607531 4607646 -246080208 - L2 LINE L2 0 3313 3188 327 336 57 0 chr2 4607949 4608089 -246079765 - MIR SINE MIR -65 197 50 369 43 0 0 chr2 4610378 4610425 -246077429 + (CA)n Simple_repeat Simple_repeat 2 48 0 605 238 119 61 chr2 4610427 4610788 -246077066 - Charlie4a DNA MER1_type -104 404 23 1177 106 29 114 chr2 4610810 4610973 -246076881 - MER30 DNA MER1_type 0 230 55 1985 155 0 16 chr2 4610973 4611290 -246076564 - AluSx SINE Alu 0 312 1 1177 106 29 114 chr2 4611290 4611351 -246076503 - MER30 DNA MER1_type -175 55 26 2788 121 0 0 chr2 4611351 4611715 -246076139 - THE1B LTR MaLR 0 364 1 1177 106 29 114 chr2 4611715 4611735 -246076119 - MER30 DNA MER1_type -204 26 6 208 289 0 33 chr2 4612027 4612117 -246075737 + (TA)n Simple_repeat Simple_repeat 2 88 0 233 268 101 67 chr2 4612318 4612527 -246075327 + L1ME LINE L1 5652 5867 -254 185 325 62 100 chr2 4614859 4615019 -246072835 + MIR3 SINE MIR 41 194 -14 24 0 0 0 chr2 4615030 4615054 -246072800 + AT_rich Low_complexity Low_complexity 1 24 0 306 351 48 30 chr2 4615251 4615416 -246072438 + L2 LINE L2 2762 2929 -385 232 292 108 46 chr2 4615633 4615805 -246072049 - MER5B DNA MER1_type -11 178 1 28 29 0 0 chr2 4618247 4618282 -246069572 + AT_rich Low_complexity Low_complexity 1 35 0 317 253 114 13 chr2 4619377 4619535 -246068319 - L1ME4a LINE L1 -157 5964 5791 212 256 268 18 chr2 4620309 4620477 -246067377 - MIR SINE MIR -39 223 14 208 237 85 0 chr2 4620808 4620867 -246066987 - L2 LINE L2 -50 3263 3200 2868 117 0 3 chr2 4622059 4622435 -246065419 - THE1C LTR MaLR 0 375 1 381 364 48 36 chr2 4623855 4624185 -246063669 + L1MEd LINE L1 530 863 -5256 524 318 53 26 chr2 4624356 4624885 -246062969 + L1MEd LINE L1 1053 1595 -4715 292 205 33 8 chr2 4624970 4625092 -246062762 + (TA)n Simple_repeat Simple_repeat 2 126 0 28 91 0 0 chr2 4625131 4625208 -246062646 + AT_rich Low_complexity Low_complexity 1 77 0 29 60 0 0 chr2 4625654 4625704 -246062150 + AT_rich Low_complexity Low_complexity 1 50 0 1002 215 27 32 chr2 4626581 4626800 -246061054 - MER20 DNA MER1_type -1 218 1 261 268 98 41 chr2 4627057 4627180 -246060674 + L2 LINE L2 3137 3266 -6 184 288 89 85 chr2 4628426 4628662 -246059192 + L2 LINE L2 3077 3313 0 2091 130 0 16 chr2 4629260 4629576 -246058278 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr2 4630154 4630180 -246057674 + AT_rich Low_complexity Low_complexity 1 26 0 1187 193 121 43 chr2 4630260 4630594 -246057260 - MLT1A1 LTR MaLR -7 421 1 733 205 0 0 chr2 4630756 4630932 -246056922 - FLAM_C SINE Alu 0 176 1 1032 247 18 0 chr2 4631208 4631435 -246056419 - MLT1F1 LTR MaLR -7 560 330 252 212 47 35 chr2 4631555 4631640 -246056214 - MLT1F1 LTR MaLR -481 86 1 2240 91 14 0 chr2 4632274 4632570 -246055284 + AluSp SINE Alu 1 300 -13 387 298 13 33 chr2 4632705 4632856 -246054998 + GA-rich Low_complexity Low_complexity 1 148 0 23 33 0 0 chr2 4634426 4634456 -246053398 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 4634480 4634515 -246053339 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr2 4634572 4634621 -246053233 + AT_rich Low_complexity Low_complexity 1 49 0 4060 232 113 40 chr2 4634918 4636202 -246051652 + Charlie1a DNA MER1_type 19 1396 -59 263 308 88 13 chr2 4636216 4636375 -246051479 - L2 LINE L2 -2009 1305 1135 2099 119 0 44 chr2 4637268 4637588 -246050266 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 4637860 4637888 -246049966 + AT_rich Low_complexity Low_complexity 1 28 0 333 82 0 0 chr2 4638597 4638646 -246049208 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 268 42 38 chr2 4640336 4640421 -246047433 - MIR SINE MIR -68 140 53 2732 32 0 0 chr2 4640729 4641039 -246046815 - AluY SINE Alu 0 311 2 208 164 0 36 chr2 4642626 4642681 -246045173 + CT-rich Low_complexity Low_complexity 4 56 0 310 160 13 13 chr2 4642737 4642812 -246045042 + CT-rich Low_complexity Low_complexity 4 78 0 201 313 9 18 chr2 4643123 4643235 -246044619 + GA-rich Low_complexity Low_complexity 4 114 0 199 195 18 43 chr2 4643654 4643818 -246044036 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 395 348 111 14 chr2 4644371 4644650 -246043204 - L3 LINE CR1 -25 1552 1247 793 164 0 0 chr2 4644651 4644767 -246043087 + FLAM_C SINE Alu 3 118 -15 452 126 11 0 chr2 4645076 4645163 -246042691 + (CA)n Simple_repeat Simple_repeat 1 88 0 249 326 41 10 chr2 4645510 4645608 -246042246 + MIR3 SINE MIR 62 162 -46 186 43 0 0 chr2 4646727 4646750 -246041104 + (GA)n Simple_repeat Simple_repeat 2 24 0 223 225 0 56 chr2 4649218 4649289 -246038565 + (TG)n Simple_repeat Simple_repeat 2 68 0 2483 74 3 10 chr2 4649460 4649769 -246038085 + AluSp SINE Alu 1 307 -6 217 259 46 46 chr2 4650552 4650660 -246037194 + MIR SINE MIR 112 219 -43 6469 96 15 14 chr2 4652286 4653652 -246034202 + L1PA12 LINE L1 4795 6168 0 1928 149 3 3 chr2 4654065 4654360 -246033494 + AluJo SINE Alu 1 295 -17 1942 91 88 0 chr2 4654511 4654785 -246033069 + AluSp SINE Alu 2 299 -14 947 253 83 41 chr2 4654845 4655138 -246032716 - MLT1E2 LTR MaLR -87 539 225 2339 163 49 5 chr2 4655138 4655548 -246032306 + MSTA LTR MaLR 1 428 0 947 253 83 41 chr2 4655548 4655641 -246032213 - MLT1E2 LTR MaLR -401 225 137 316 270 45 27 chr2 4656255 4656366 -246031488 + HAL1b LINE L1 621 733 -615 259 231 88 27 chr2 4656986 4657133 -246030721 + L1MDa LINE L1 2468 2623 -3917 2755 23 0 0 chr2 4657395 4657705 -246030149 + AluYa5 SINE Alu 1 310 -1 415 304 53 6 chr2 4658359 4658530 -246029324 - MIR SINE MIR -72 190 12 1026 262 75 75 chr2 4658533 4659422 -246028432 + MER45C DNA AcHobo 1 943 -10 390 305 0 0 chr2 4659511 4659616 -246028238 - L3 LINE CR1 -272 1305 1201 2295 118 0 0 chr2 4659857 4660170 -246027684 + AluSq SINE Alu 1 313 0 237 278 0 0 chr2 4661945 4662035 -246025819 + (TA)n Simple_repeat Simple_repeat 1 90 0 218 402 0 0 chr2 4662120 4662212 -246025642 - MIR3 SINE MIR -16 192 101 223 346 122 19 chr2 4663025 4663181 -246024673 - MIR SINE MIR -71 191 20 261 83 0 0 chr2 4663290 4663326 -246024528 + (T)n Simple_repeat Simple_repeat 1 36 0 234 62 0 0 chr2 4663810 4663842 -246024012 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 25 75 0 0 chr2 4664021 4664074 -246023780 + AT_rich Low_complexity Low_complexity 1 53 0 506 277 63 51 chr2 4664089 4664342 -246023512 + L2 LINE L2 3056 3311 -2 267 79 0 0 chr2 4664820 4664858 -246022996 + (TG)n Simple_repeat Simple_repeat 2 39 0 817 244 60 69 chr2 4666481 4666804 -246021050 - L2 LINE L2 -359 2913 2581 306 363 65 0 chr2 4667330 4667454 -246020400 - L2 LINE L2 0 3272 3141 1574 88 97 0 chr2 4668351 4668568 -246019286 + L1PA7 LINE L1 5917 6154 0 454 198 12 0 chr2 4669186 4669267 -246018587 - LTR16A1 LTR ERVL -2 455 374 330 311 83 0 chr2 4669452 4669632 -246018222 - LTR16A1 LTR ERVL -116 341 147 593 234 42 42 chr2 4670390 4670582 -246017272 + MLT1J1 LTR MaLR 18 209 -237 294 266 16 40 chr2 4670692 4670816 -246017038 - LTR33 LTR ERVL -2 519 399 670 320 32 41 chr2 4671291 4671632 -246016222 - L3 LINE CR1 -175 1402 1065 817 244 37 5 chr2 4671770 4671987 -246015867 - MER58A DNA MER1_type 0 224 1 412 212 18 44 chr2 4671998 4672111 -246015743 + MER5B DNA MER1_type 4 113 -65 946 224 103 33 chr2 4672114 4672221 -246015633 - L1MDa LINE L1 -6239 301 203 1669 171 23 10 chr2 4672221 4672526 -246015328 + AluJo SINE Alu 1 309 -3 946 224 103 33 chr2 4672526 4672690 -246015164 - L1MDa LINE L1 -6337 203 11 666 218 67 22 chr2 4673037 4673216 -246014638 + MER5A DNA MER1_type 3 189 0 487 301 0 28 chr2 4673268 4673411 -246014443 - MER5B DNA MER1_type -3 175 37 290 181 0 14 chr2 4673549 4673621 -246014233 + (TA)n Simple_repeat Simple_repeat 2 72 0 350 281 0 0 chr2 4673628 4673717 -246014137 - L1MC4 LINE L1 -1339 6703 6615 1791 198 147 2 chr2 4673728 4674143 -246013711 - MLT2B2 LTR ERVL -40 475 1 1298 79 0 6 chr2 4674605 4674783 -246013071 + L1PA5 LINE L1 5978 6154 0 259 329 61 13 chr2 4675243 4675474 -246012380 - HAL1 LINE L1 -2063 444 203 436 68 27 14 chr2 4675751 4675824 -246012030 + (GAAAA)n Simple_repeat Simple_repeat 2 75 0 282 73 0 0 chr2 4676050 4676091 -246011763 + (A)n Simple_repeat Simple_repeat 1 41 0 34 42 0 0 chr2 4676786 4676834 -246011020 + AT_rich Low_complexity Low_complexity 1 48 0 411 282 15 0 chr2 4677656 4677787 -246010067 + MER94 DNA DNA 1 133 -1 2072 137 5 67 chr2 4677898 4678285 -246009569 - THE1B LTR MaLR 0 364 2 409 98 49 16 chr2 4678635 4678758 -246009096 + (TA)n Simple_repeat Simple_repeat 1 127 0 657 64 70 18 chr2 4678772 4678943 -246008911 + (TA)n Simple_repeat Simple_repeat 1 180 0 2688 20 0 0 chr2 4680758 4681060 -246006794 - AluY SINE Alu -9 302 1 24 32 0 0 chr2 4682303 4682334 -246005520 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 4682861 4682884 -246004970 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 4686213 4686234 -246001620 + AT_rich Low_complexity Low_complexity 1 21 0 498 221 66 12 chr2 4686970 4687136 -246000718 + MER39 LTR ERV1 1 170 -372 453 206 39 58 chr2 4687117 4687272 -246000582 + MER39 LTR ERV1 357 508 -199 * 2411 72 0 0 chr2 4687315 4687607 -246000247 - AluY SINE Alu -19 292 1 306 194 0 97 chr2 4687636 4687729 -246000125 - AluJ/FLAM SINE Alu -217 85 2 1525 178 6 54 chr2 4687753 4688068 -245999786 - AluJo SINE Alu -12 300 1 257 397 7 14 chr2 4688578 4688724 -245999130 - L3 LINE CR1 -4 1573 1429 2242 188 60 34 chr2 4688727 4689263 -245998591 - MLT2B3 LTR ERVL -1 553 4 1779 159 48 7 chr2 4689278 4689568 -245998286 + AluJb SINE Alu 1 302 -10 5274 188 34 54 chr2 4689569 4690880 -245996974 - ERVL-B3 LTR ERVL -8 5756 4473 2288 170 5 2 chr2 4690856 4691257 -245996597 + ERVL LTR ERVL 4077 4478 -1286 * 1922 250 78 18 chr2 4691257 4691978 -245995876 - MLT-int LTR MaLR -59 1676 864 1381 190 23 50 chr2 4691983 4692325 -245995529 - MSTD LTR MaLR -63 333 1 266 342 102 16 chr2 4692352 4692539 -245995315 - L3 LINE CR1 -208 1369 1167 277 317 58 0 chr2 4693399 4693503 -245994351 + L2 LINE L2 3203 3312 -1 291 54 0 0 chr2 4693587 4693624 -245994230 + (TG)n Simple_repeat Simple_repeat 2 38 0 215 289 64 64 chr2 4695277 4695450 -245992404 - MIR SINE MIR 0 262 90 2297 98 0 10 chr2 4695476 4695783 -245992071 + AluSc SINE Alu 1 304 -5 1797 155 67 28 chr2 4696836 4697197 -245990657 + THE1C LTR MaLR 1 375 0 321 355 61 20 chr2 4697631 4697828 -245990026 + L1MC/D LINE L1 5540 5744 -2064 2642 42 0 0 chr2 4698594 4698905 -245988949 - AluY SINE Alu 0 311 1 521 184 64 0 chr2 4698911 4699020 -245988834 - MLT1A1 LTR MaLR -249 116 1 235 283 17 0 chr2 4699419 4699479 -245988375 - MIR SINE MIR -112 96 36 2496 67 0 0 chr2 4699663 4699962 -245987892 + AluY SINE Alu 1 299 -12 1831 156 54 0 chr2 4699994 4700328 -245987526 - THE1C LTR MaLR 0 375 24 2487 67 0 0 chr2 4700820 4701118 -245986736 + AluY SINE Alu 1 298 -13 2032 150 50 6 chr2 4701150 4701509 -245986345 - THE1C LTR MaLR 0 375 1 2671 38 0 6 chr2 4701799 4702112 -245985742 + AluY SINE Alu 1 311 0 394 298 88 23 chr2 4703310 4703481 -245984373 - L1ME3A LINE L1 -24 6146 5965 548 297 176 11 chr2 4703546 4704108 -245983746 - L1ME3A LINE L1 -211 5951 5297 554 272 92 87 chr2 4704318 4704409 -245983445 - L1ME3A LINE L1 -1310 4836 4747 2222 129 0 0 chr2 4704409 4704719 -245983135 - AluSg SINE Alu 0 310 1 554 272 92 87 chr2 4704719 4706781 -245981073 - L1ME3A LINE L1 -1399 4747 2674 334 223 16 8 chr2 4706797 4706918 -245980936 + CT-rich Low_complexity Low_complexity 3 124 0 494 274 72 33 chr2 4706943 4707333 -245980521 - L1ME3A LINE L1 -3528 2618 2214 348 211 0 0 chr2 4708036 4708112 -245979742 + (TA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr2 4708111 4708149 -245979705 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 1680 184 0 7 chr2 4708149 4708427 -245979427 - AluSx SINE Alu -30 282 7 28 79 0 0 chr2 4709303 4709366 -245978488 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr2 4709570 4709595 -245978259 + (TG)n Simple_repeat Simple_repeat 1 25 0 1292 180 6 0 chr2 4710990 4711261 -245976593 - MER33 DNA MER1_type -58 266 1 536 282 44 44 chr2 4711839 4712045 -245975809 + MIR SINE MIR 41 246 -16 201 94 0 0 chr2 4712052 4712084 -245975770 + (TAG)n Simple_repeat Simple_repeat 1 32 0 228 143 0 0 chr2 4713080 4713122 -245974732 + (TC)n Simple_repeat Simple_repeat 2 43 0 2429 79 0 0 chr2 4713635 4713938 -245973916 + AluY SINE Alu 1 303 -8 252 169 102 0 chr2 4714115 4714174 -245973680 + MIR SINE MIR 87 151 -111 339 311 101 29 chr2 4714880 4715118 -245972736 + MIR SINE MIR 3 257 -5 554 352 67 15 chr2 4715679 4716082 -245971772 - L2 LINE L2 -444 2870 2447 2383 82 0 13 chr2 4717477 4717792 -245970062 - AluY SINE Alu 0 311 1 261 250 24 12 chr2 4718686 4718770 -245969084 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 843 130 15 21 chr2 4719803 4720140 -245967714 + (TG)n Simple_repeat Simple_repeat 1 334 0 1459 105 0 0 chr2 4720633 4720823 -245967031 + AluSg/x SINE Alu 110 299 -13 412 181 11 53 chr2 4724254 4724348 -245963506 + MLT1J2 LTR MaLR 361 450 0 316 260 27 0 chr2 4724424 4724574 -245963280 + (TA)n Simple_repeat Simple_repeat 2 155 0 300 237 26 0 chr2 4724679 4724852 -245963002 + (TA)n Simple_repeat Simple_repeat 1 177 0 202 429 18 39 chr2 4725380 4725475 -245962379 - L2 LINE L2 -70 3202 3106 1996 195 0 11 chr2 4725475 4725844 -245962010 - MLT1A1 LTR MaLR 0 365 1 202 429 18 39 chr2 4725844 4726028 -245961826 - L2 LINE L2 -166 3106 2929 228 35 0 0 chr2 4726925 4726954 -245960900 + (CA)n Simple_repeat Simple_repeat 2 30 0 496 304 81 20 chr2 4729509 4729824 -245958030 + L1ME LINE L1 5486 5820 -301 229 283 0 0 chr2 4730021 4730074 -245957780 + (CATA)n Simple_repeat Simple_repeat 2 54 0 351 306 99 84 chr2 4730418 4730807 -245957047 + L1ME4a LINE L1 5304 5686 -435 180 77 0 0 chr2 4730807 4730833 -245957021 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1658 180 3 28 chr2 4730836 4731125 -245956729 - AluJo SINE Alu -30 282 1 351 306 99 84 chr2 4731125 4731205 -245956649 + L1ME4a LINE L1 5687 5786 -335 332 276 163 23 chr2 4731243 4731464 -245956390 - MLT1J2 LTR MaLR -3 447 196 355 220 30 30 chr2 4732757 4732857 -245954997 + L1ME4a LINE L1 5955 6054 -67 2128 107 3 3 chr2 4733205 4733494 -245954360 + AluSx SINE Alu 3 291 -21 721 216 42 6 chr2 4733522 4733689 -245954165 + MSTD LTR MaLR 223 395 -1 384 252 172 7 chr2 4734798 4734949 -245952905 + MER117 DNA MER1_type 21 196 -1 2058 137 0 19 chr2 4735189 4735503 -245952351 - AluSx SINE Alu -4 308 1 634 339 29 4 chr2 4736480 4736754 -245951100 - L2 LINE L2 -1318 1996 1716 947 176 0 13 chr2 4739025 4739184 -245948670 + FRAM SINE Alu 1 157 -9 22 80 0 0 chr2 4741425 4741475 -245946379 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 4741504 4741526 -245946328 + AT_rich Low_complexity Low_complexity 1 22 0 1088 262 28 6 chr2 4741654 4741971 -245945883 - MER33 DNA MER1_type 0 324 1 325 299 60 22 chr2 4743803 4743937 -245943917 - MIR3 SINE MIR -59 149 11 231 347 51 10 chr2 4744064 4744210 -245943644 - MER5A DNA MER1_type -5 173 24 250 258 0 16 chr2 4744897 4744959 -245942895 - MLT1L LTR MaLR -111 504 444 430 302 58 0 chr2 4744959 4745098 -245942756 + MERVL LTR ERVL 4166 4312 -1173 1384 174 16 172 chr2 4745167 4745610 -245942244 + MLT1A2 LTR MaLR 1 374 0 256 140 0 0 chr2 4746018 4746068 -245941786 + L1MC4 LINE L1 6656 6705 -1337 257 109 22 0 chr2 4746068 4746114 -245941740 + (TA)n Simple_repeat Simple_repeat 2 48 0 2108 128 3 3 chr2 4746316 4746613 -245941241 + AluSx SINE Alu 9 305 -7 292 208 20 40 chr2 4747179 4747280 -245940574 + (TATG)n Simple_repeat Simple_repeat 2 100 0 185 156 0 22 chr2 4747295 4747340 -245940514 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 71 0 0 chr2 4747511 4747539 -245940315 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 363 283 79 12 chr2 4748412 4748584 -245939270 + MIR SINE MIR 31 209 -53 185 308 66 22 chr2 4748725 4748816 -245939038 + MIR SINE MIR 70 164 -98 283 226 39 77 chr2 4749856 4750123 -245937731 + (CCCA)n Simple_repeat Simple_repeat 1 256 0 262 203 0 31 chr2 4750682 4750746 -245937108 + G-rich Low_complexity Low_complexity 4 65 0 27 0 0 0 chr2 4750836 4750863 -245936991 + AT_rich Low_complexity Low_complexity 1 27 0 683 224 12 12 chr2 4751020 4751154 -245936700 - MER5A DNA MER1_type -8 181 45 1594 222 101 9 chr2 4751154 4751582 -245936272 + MLT1C LTR MaLR 1 467 0 683 224 12 12 chr2 4751582 4751617 -245936237 - MER5A DNA MER1_type -143 46 12 1633 160 63 3 chr2 4751740 4752027 -245935827 + MER50 LTR ERV1 3 306 -428 1279 189 44 36 chr2 4752029 4752159 -245935695 + MER50 LTR ERV1 434 562 -172 2059 125 20 17 chr2 4752159 4752456 -245935398 - AluSx SINE Alu -12 300 3 1279 189 44 36 chr2 4752456 4752600 -245935254 + MER50 LTR ERV1 562 710 -24 227 287 0 69 chr2 4753013 4753100 -245934754 - MIR SINE MIR -109 99 19 2405 84 0 7 chr2 4753312 4753621 -245934233 + AluY SINE Alu 1 307 -4 219 204 20 0 chr2 4755630 4755679 -245932175 + (TA)n Simple_repeat Simple_repeat 2 51 0 309 183 54 0 chr2 4755750 4755843 -245932011 + (TA)n Simple_repeat Simple_repeat 2 99 0 197 236 36 36 chr2 4756004 4756059 -245931795 + MIR3 SINE MIR 126 180 -28 324 216 24 32 chr2 4757701 4757826 -245930028 + (TAGA)n Simple_repeat Simple_repeat 3 126 0 222 37 0 0 chr2 4758741 4758768 -245929086 + (TG)n Simple_repeat Simple_repeat 2 28 0 2439 80 3 3 chr2 4759004 4759315 -245928539 + AluY SINE Alu 1 311 0 193 215 89 51 chr2 4759422 4759501 -245928353 + MIR3 SINE MIR 106 187 -21 807 290 140 6 chr2 4759875 4760240 -245927614 + MLT1G1 LTR MaLR 86 499 -96 201 213 0 21 chr2 4760517 4760564 -245927290 + L2 LINE L2 3267 3312 -1 285 94 31 16 chr2 4761556 4761620 -245926234 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 142 239 44 chr2 4761727 4761840 -245926014 + MLT1C LTR MaLR 2 136 -331 8950 182 35 9 chr2 4761841 4763247 -245924607 + L1MA3 LINE L1 21 1390 -6246 612 0 0 0 chr2 4763247 4763315 -245924539 + (GA)n Simple_repeat Simple_repeat 2 69 0 8950 182 35 9 chr2 4763315 4764727 -245923127 + L1MA3 LINE L1 1390 6893 -743 1096 203 8 38 chr2 4764730 4764996 -245922858 - AluJo SINE Alu -23 289 32 4628 119 80 10 chr2 4764996 4765772 -245922082 + L1MA3 LINE L1 6885 7714 -10 2256 99 0 7 chr2 4765804 4766108 -245921746 + AluSg1 SINE Alu 5 306 -3 1098 238 44 24 chr2 4766124 4766464 -245921390 + MLT1C LTR MaLR 121 467 0 348 320 26 48 chr2 4766486 4766717 -245921137 + MIR SINE MIR 13 238 -24 22 56 0 0 chr2 4767729 4767765 -245920089 + AT_rich Low_complexity Low_complexity 1 36 0 208 69 0 0 chr2 4769390 4769419 -245918435 - MIR SINE MIR -66 142 114 186 133 0 0 chr2 4770507 4770537 -245917317 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 4771401 4771429 -245916425 + AT_rich Low_complexity Low_complexity 1 28 0 2106 128 6 13 chr2 4771744 4772056 -245915798 - AluSg SINE Alu 0 310 1 464 264 22 55 chr2 4772418 4772600 -245915254 + MER69A DNA AcHobo 1 176 -1 25 0 0 0 chr2 4772801 4772826 -245915028 + AT_rich Low_complexity Low_complexity 1 25 0 2178 115 0 0 chr2 4773426 4773713 -245914141 - AluSg SINE Alu -23 287 1 1049 72 0 0 chr2 4774049 4774187 -245913667 + MLT2B1 LTR ERVL 1 138 -382 971 199 0 5 chr2 4774200 4774386 -245913468 + MLT2B2 LTR ERVL 329 513 -2 285 252 244 0 chr2 4775243 4775370 -245912484 + MIR SINE MIR 99 256 -6 263 271 14 14 chr2 4775417 4775487 -245912367 - MER5A DNA MER1_type -5 184 115 226 234 0 0 chr2 4775938 4775985 -245911869 + GA-rich Low_complexity Low_complexity 3 49 0 211 259 94 24 chr2 4775993 4776078 -245911776 + MIR SINE MIR 119 209 -53 2840 107 0 3 chr2 4776736 4777101 -245910753 + THE1B LTR MaLR 1 364 0 4240 139 26 2 chr2 4777365 4777983 -245909871 + MER41B LTR ERV1 1 633 -2 235 268 223 27 chr2 4778502 4778614 -245909240 + MER34 LTR ERV1 8 141 -401 * 237 220 121 44 chr2 4778602 4778693 -245909161 + MER34 LTR ERV1 76 173 -369 * 986 211 80 35 chr2 4778682 4778983 -245908871 + MER39 LTR ERV1 391 565 0 26 0 0 0 chr2 4779584 4779610 -245908244 + AT_rich Low_complexity Low_complexity 1 26 0 414 85 0 0 chr2 4780509 4780568 -245907286 + (GGA)n Simple_repeat Simple_repeat 2 60 0 223 221 48 10 chr2 4780986 4781090 -245906764 + (TA)n Simple_repeat Simple_repeat 1 108 0 28 29 0 0 chr2 4783900 4783935 -245903919 + AT_rich Low_complexity Low_complexity 1 35 0 1753 132 0 137 chr2 4784111 4784476 -245903378 + MER1B DNA MER1_type 25 339 0 260 228 55 41 chr2 4784510 4784655 -245903199 + (ATGTG)n Simple_repeat Simple_repeat 2 148 0 208 208 6 82 chr2 4784690 4784873 -245902981 + (TG)n Simple_repeat Simple_repeat 1 169 0 * 321 208 77 30 chr2 4784772 4784940 -245902914 + (TAGTG)n Simple_repeat Simple_repeat 5 180 0 307 238 71 18 chr2 4784966 4785134 -245902720 + (TAGTG)n Simple_repeat Simple_repeat 2 178 0 203 293 81 50 chr2 4786111 4786210 -245901644 - MIR SINE MIR -70 192 91 2294 103 3 0 chr2 4787426 4787726 -245900128 - AluSp SINE Alu -12 301 1 347 238 266 21 chr2 4787952 4788095 -245899759 - MLT1J LTR MaLR -333 178 1 5321 306 76 33 chr2 4789023 4789499 -245898355 - L2 LINE L2 -623 2691 2237 2121 106 7 0 chr2 4789499 4789781 -245898073 - AluSc SINE Alu -25 284 1 5321 306 76 33 chr2 4789781 4790738 -245897116 - L2 LINE L2 -1077 2237 1323 1420 205 13 30 chr2 4790738 4791036 -245896818 - AluJb SINE Alu -19 293 1 5321 306 76 33 chr2 4791036 4792020 -245895834 - L2 LINE L2 -1991 1323 159 2283 114 0 0 chr2 4792020 4792319 -245895535 - AluSg SINE Alu -11 299 1 5321 306 76 33 chr2 4792319 4792393 -245895461 - L2 LINE L2 -3155 159 90 33 0 0 0 chr2 4792506 4792539 -245895315 + AT_rich Low_complexity Low_complexity 1 33 0 2485 74 0 3 chr2 4792539 4792851 -245895003 - AluY SINE Alu 0 311 1 2286 121 0 3 chr2 4793117 4793431 -245894423 + AluSq SINE Alu 1 313 0 445 347 55 24 chr2 4793434 4793814 -245894040 + L1M4 LINE L1 3115 3499 -2647 668 308 242 8 chr2 4793858 4794135 -245893719 - L2 LINE L2 -561 2753 2542 2228 191 46 20 chr2 4794135 4794590 -245893264 - MLT1C LTR MaLR 0 467 1 668 308 242 8 chr2 4794590 4794832 -245893022 - L2 LINE L2 -772 2542 2112 293 381 7 0 chr2 4795128 4795267 -245892587 + L2 LINE L2 3133 3272 0 224 29 86 0 chr2 4795931 4795966 -245891888 + T-rich Low_complexity Low_complexity 4 41 0 2297 106 0 0 chr2 4796636 4796929 -245890925 + AluSx SINE Alu 5 297 -15 257 209 11 22 chr2 4796931 4797022 -245890832 + (TA)n Simple_repeat Simple_repeat 1 90 0 1973 137 0 0 chr2 4798055 4798332 -245889522 + AluSx SINE Alu 1 277 -35 220 26 26 26 chr2 4798336 4798374 -245889480 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 4800586 4800607 -245887247 + AT_rich Low_complexity Low_complexity 1 21 0 1851 152 10 3 chr2 4800607 4800896 -245886958 - AluSx SINE Alu -20 292 2 2156 108 3 13 chr2 4801363 4801670 -245886184 - AluY SINE Alu -7 304 1 603 236 99 6 chr2 4805302 4805484 -245882370 - MER3 DNA MER1_type -1 208 10 1861 137 4 0 chr2 4805775 4806045 -245881809 + AluSx SINE Alu 22 292 -20 203 333 0 0 chr2 4806079 4806139 -245881715 - L2 LINE L2 -16 3256 3197 469 228 123 49 chr2 4806148 4806310 -245881544 - MIR SINE MIR -19 243 70 1914 110 10 61 chr2 4806727 4807037 -245880817 - AluSx SINE Alu -13 299 6 278 0 0 51 chr2 4807037 4807076 -245880778 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1222 207 73 25 chr2 4807078 4807353 -245880501 - AluJb SINE Alu -24 288 1 1274 103 65 73 chr2 4807730 4807962 -245879892 + MER30 DNA MER1_type 1 230 0 2095 104 7 0 chr2 4808162 4808449 -245879405 - AluSx SINE Alu -23 289 1 207 339 28 0 chr2 4809518 4809627 -245878227 - MIR SINE MIR -56 206 95 1366 105 5 20 chr2 4809679 4809879 -245877975 + L1PA15 LINE L1 5962 6158 -7 409 136 0 0 chr2 4810812 4810878 -245876976 - Alu SINE Alu -5 306 241 3597 215 46 48 chr2 4811020 4812221 -245875633 + L1MD1 LINE L1 1147 2345 -4195 246 284 0 21 chr2 4812315 4812410 -245875444 + L1MD1 LINE L1 5493 5585 -955 849 110 0 0 chr2 4812412 4812539 -245875315 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2020 164 0 0 chr2 4812545 4812856 -245874998 - AluSx SINE Alu -1 311 1 1822 195 88 17 chr2 4812870 4813516 -245874338 + L1MD1 LINE L1 5592 6333 -303 208 318 25 117 chr2 4813532 4813771 -245874083 + MIR SINE MIR 11 227 -35 214 338 105 48 chr2 4813797 4814380 -245873474 + L2 LINE L2 2362 2977 -337 339 25 0 0 chr2 4814780 4814820 -245873034 + (CA)n Simple_repeat Simple_repeat 2 41 0 2038 137 3 10 chr2 4814862 4815161 -245872693 - AluSx SINE Alu -15 297 1 634 263 0 0 chr2 4815339 4815491 -245872363 - L1MA10 LINE L1 -2 6332 6181 3862 176 45 32 chr2 4815508 4816203 -245871651 - MER44D DNA MER2_type 0 705 2 526 211 9 0 chr2 4816230 4816339 -245871515 - L1MB1 LINE L1 -9 6159 6050 25 0 0 0 chr2 4816372 4816397 -245871457 + AT_rich Low_complexity Low_complexity 1 25 0 243 348 121 9 chr2 4816748 4816876 -245870978 - MIR SINE MIR -61 147 13 1210 138 0 21 chr2 4817046 4817234 -245870620 - AluSx SINE Alu -128 184 1 309 327 159 22 chr2 4817238 4817608 -245870246 + L2 LINE L2 1989 2409 -905 183 42 0 0 chr2 4818381 4818405 -245869449 + (CATTC)n Simple_repeat Simple_repeat 1 24 0 249 311 0 0 chr2 4820215 4820289 -245867565 + tRNA-Ile-ATT tRNA tRNA 1 74 -3 182 247 260 0 chr2 4821120 4821193 -245866661 - MIR SINE MIR -51 211 120 23 0 0 0 chr2 4821444 4821467 -245866387 + AT_rich Low_complexity Low_complexity 1 23 0 203 122 24 24 chr2 4822237 4822278 -245865576 + A-rich Low_complexity Low_complexity 4 44 0 308 346 103 14 chr2 4822475 4822689 -245865165 + MIR SINE MIR 3 235 -27 780 187 45 90 chr2 4822708 4822976 -245864878 + MLT1A1 LTR MaLR 110 365 0 669 221 0 7 chr2 4823095 4823235 -245864619 + L1PB4 LINE L1 6018 6156 0 193 274 154 34 chr2 4823394 4823511 -245864343 + MIR3 SINE MIR 10 140 -68 575 225 62 0 chr2 4823702 4823831 -245864023 + MLT1A2 LTR MaLR 4 140 -234 2054 131 64 33 chr2 4823831 4824191 -245863663 + THE1C LTR MaLR 1 371 -4 9921 143 24 36 chr2 4824195 4825793 -245862061 + THE1C-int LTR MaLR 3 1580 0 1649 191 55 12 chr2 4825793 4826138 -245861716 + THE1C LTR MaLR 1 360 -15 810 222 54 42 chr2 4826150 4826389 -245861465 + MLT1A2 LTR MaLR 133 374 0 189 171 0 0 chr2 4827353 4827388 -245860466 + (TA)n Simple_repeat Simple_repeat 2 36 0 225 273 23 0 chr2 4827390 4827478 -245860376 - L1MC4 LINE L1 -1339 6703 6614 232 254 0 17 chr2 4827478 4827537 -245860317 + (TATG)n Simple_repeat Simple_repeat 2 59 0 243 270 0 0 chr2 4827537 4827626 -245860228 + L1MC4 LINE L1 6614 6702 -1340 231 277 153 7 chr2 4827716 4827853 -245860001 - MER103 DNA DNA -8 158 2 306 319 111 21 chr2 4827996 4828140 -245859714 - MER5A DNA MER1_type -31 158 2 211 327 29 39 chr2 4828955 4829059 -245858795 - MIR3 SINE MIR -35 173 71 352 285 69 14 chr2 4830687 4830831 -245857023 - MER5A DNA MER1_type -11 178 27 480 152 36 27 chr2 4830968 4831080 -245856774 - L1MB4 LINE L1 -1 6179 6067 2154 104 30 0 chr2 4831132 4831430 -245856424 - AluSg1 SINE Alu -2 307 1 2411 211 20 10 chr2 4831430 4831933 -245855921 - L1MB4 LINE L1 -106 6074 5567 299 318 8 8 chr2 4832561 4832693 -245855161 + (TGG)n Simple_repeat Simple_repeat 3 134 0 263 226 78 35 chr2 4833204 4833319 -245854535 + Charlie8 DNA MER1_type 73 192 -2225 372 315 6 22 chr2 4833737 4833918 -245853936 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 * 442 307 11 6 chr2 4833796 4833975 -245853879 + (CCA)n Simple_repeat Simple_repeat 1 180 0 268 346 13 0 chr2 4833937 4834093 -245853761 + (CACCAT)n Simple_repeat Simple_repeat 1 158 0 * 223 250 56 28 chr2 4834695 4834767 -245853087 + L2 LINE L2 3147 3220 -52 2494 59 0 0 chr2 4835682 4835985 -245851869 - AluY SINE Alu -8 303 1 211 189 0 0 chr2 4837387 4837424 -245850430 + (TG)n Simple_repeat Simple_repeat 2 38 0 2241 104 16 0 chr2 4837462 4837769 -245850085 - AluSq SINE Alu -1 312 1 2153 139 47 36 chr2 4838393 4838753 -245849101 - THE1B LTR MaLR 0 364 1 11988 106 13 8 chr2 4838753 4840325 -245847529 - THE1B-int LTR MaLR 0 1580 1 2207 126 47 49 chr2 4840325 4840690 -245847164 - THE1B LTR MaLR 0 364 1 212 253 13 0 chr2 4842300 4842375 -245845479 + (TA)n Simple_repeat Simple_repeat 1 76 0 2218 118 7 10 chr2 4842394 4842698 -245845156 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 4842949 4842971 -245844883 + AT_rich Low_complexity Low_complexity 1 22 0 403 171 19 0 chr2 4843763 4843868 -245843986 + (TG)n Simple_repeat Simple_repeat 2 108 0 218 205 53 41 chr2 4843923 4844094 -245843760 + (TG)n Simple_repeat Simple_repeat 1 173 0 289 117 33 0 chr2 4844138 4844198 -245843656 + (TG)n Simple_repeat Simple_repeat 2 63 0 309 266 182 13 chr2 4844781 4844935 -245842919 + L1ME3A LINE L1 5986 6165 -5 339 285 128 75 chr2 4845000 4845281 -245842573 + L1MB2 LINE L1 969 1264 -5585 180 341 71 0 chr2 4846005 4846090 -245841764 + L2 LINE L2 2710 2800 -514 228 214 0 0 chr2 4846104 4846160 -245841694 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1915 158 0 0 chr2 4846215 4846506 -245841348 + AluSx SINE Alu 21 311 -1 357 223 204 32 chr2 4846510 4846667 -245841187 - MIR SINE MIR -63 199 16 202 304 152 27 chr2 4847068 4847180 -245840674 + L2 LINE L2 3187 3312 -1 2143 106 3 0 chr2 4850797 4851090 -245836764 + AluY SINE Alu 2 295 -16 760 245 70 84 chr2 4852288 4852697 -245835157 + MLT1I LTR MaLR 8 450 0 1814 138 7 24 chr2 4853888 4854225 -245833629 + AluSx SINE Alu 1 332 0 384 304 57 6 chr2 4854334 4854492 -245833362 - MIR SINE MIR -73 189 24 2199 104 0 36 chr2 4854672 4854980 -245832874 - AluSg SINE Alu -13 297 1 1427 237 113 7 chr2 4855021 4855456 -245832398 - L1ME2 LINE L1 -77 6087 5607 246 239 70 0 chr2 4855753 4855824 -245832030 - L1ME2 LINE L1 -673 5491 5416 1680 243 79 58 chr2 4855903 4856160 -245831694 - L1ME2 LINE L1 -742 5442 5192 2003 111 37 17 chr2 4856160 4856458 -245831396 - AluSx SINE Alu -8 304 1 1680 243 79 58 chr2 4856458 4857282 -245830572 - L1ME2 LINE L1 -992 5192 4321 11128 226 50 14 chr2 4857282 4857804 -245830050 + L1MB2 LINE L1 2557 3059 -3814 2204 120 0 0 chr2 4857804 4858103 -245829751 + AluSq SINE Alu 1 299 -14 11128 226 50 14 chr2 4858103 4860389 -245827465 + L1MB2 LINE L1 3059 5571 -1302 195 100 0 0 chr2 4860389 4860419 -245827435 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 11128 226 50 14 chr2 4860419 4861500 -245826354 + L1MB2 LINE L1 5571 6612 -261 2536 254 80 38 chr2 4861503 4862114 -245825740 - L1ME2 LINE L1 -2413 3733 3149 181 0 33 33 chr2 4862114 4862144 -245825710 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2536 254 80 38 chr2 4862144 4862813 -245825041 - L1ME2 LINE L1 -2997 3149 2399 21 57 0 0 chr2 4863218 4863253 -245824601 + AT_rich Low_complexity Low_complexity 1 35 0 326 307 145 22 chr2 4863511 4863690 -245824164 + MIR3 SINE MIR 8 208 0 284 303 25 0 chr2 4863922 4864041 -245823813 - L1ME LINE L1 -304 5817 5696 2499 71 0 3 chr2 4864509 4864817 -245823037 + AluY SINE Alu 1 307 -4 502 275 67 42 chr2 4865358 4865598 -245822256 + MIR SINE MIR 4 249 -13 3480 187 108 28 chr2 4866175 4867300 -245820554 + L1MB7 LINE L1 4883 6103 -81 933 271 13 4 chr2 4867582 4867807 -245820047 + Charlie1 DNA MER1_type 1 227 -2534 636 234 0 0 chr2 4867801 4867942 -245819912 + Charlie1 DNA MER1_type 2620 2760 -1 * 198 300 0 71 chr2 4868165 4868235 -245819619 - L2 LINE L2 -55 3217 3153 187 372 44 22 chr2 4868446 4868583 -245819271 + L2 LINE L2 3132 3271 -1 462 153 0 90 chr2 4871251 4871362 -245816492 - MER53 DNA DNA 0 189 89 393 276 17 26 chr2 4872254 4872370 -245815484 + MIR SINE MIR 33 147 -61 21 57 0 0 chr2 4873777 4873812 -245814042 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr2 4874821 4874859 -245812995 + (CA)n Simple_repeat Simple_repeat 1 38 0 243 0 0 0 chr2 4875702 4875729 -245812125 + (TG)n Simple_repeat Simple_repeat 1 27 0 245 281 37 49 chr2 4876924 4877006 -245810848 - MLT1K LTR MaLR -356 232 152 318 296 134 23 chr2 4877776 4877948 -245809906 - MIR SINE MIR -43 219 29 247 250 94 42 chr2 4878771 4878867 -245808987 - MIR SINE MIR -114 148 48 909 286 129 11 chr2 4878916 4879287 -245808567 + LTR16C LTR ERVL 69 483 -8 255 282 13 0 chr2 4879709 4879787 -245808067 - MER116 DNA Mariner 0 80 2 386 302 41 24 chr2 4879903 4880072 -245807782 + MIR SINE MIR 76 247 -15 195 356 82 22 chr2 4880557 4880592 -245807262 + MIR SINE MIR 49 80 -182 7009 152 43 13 chr2 4880592 4880840 -245807014 - Tigger3b DNA MER2_type -1797 1231 992 2031 134 0 0 chr2 4880840 4881297 -245806557 + AluSq SINE Alu 1 457 0 7009 152 43 13 chr2 4881297 4882243 -245805611 - Tigger3b DNA MER2_type -2036 992 1 195 356 82 22 chr2 4882243 4882342 -245805512 + MIR SINE MIR 80 191 -71 285 371 68 34 chr2 4882777 4883098 -245804756 + L2 LINE L2 2311 2642 -672 417 326 27 27 chr2 4883099 4883286 -245804568 - LTR16C LTR ERVL 0 491 305 1936 189 47 14 chr2 4883525 4883885 -245803969 - MSTD LTR MaLR 0 396 25 600 128 262 28 chr2 4884235 4884376 -245803478 - MER3 DNA MER1_type -6 203 30 479 279 38 25 chr2 4884422 4884580 -245803274 + MLT1H LTR MaLR 10 169 -380 485 274 0 16 chr2 4885493 4885617 -245802237 - MSTD LTR MaLR -78 318 197 217 239 0 0 chr2 4885691 4885737 -245802117 + MIR SINE MIR 89 134 -128 308 43 0 43 chr2 4886449 4886496 -245801358 + (TAA)n Simple_repeat Simple_repeat 2 46 0 429 293 99 42 chr2 4886912 4887103 -245800751 + MIR3 SINE MIR 1 202 -6 382 281 44 0 chr2 4887499 4887634 -245800220 - MIR3 SINE MIR -1 207 67 238 279 0 47 chr2 4888067 4888153 -245799701 + GA-rich Low_complexity Low_complexity 5 86 0 2384 64 0 0 chr2 4889239 4889581 -245798273 + AluY SINE Alu 1 342 0 256 272 87 11 chr2 4889724 4889816 -245798038 + MIR SINE MIR 91 189 -73 23 0 0 0 chr2 4890925 4890948 -245796906 + AT_rich Low_complexity Low_complexity 1 23 0 371 330 44 53 chr2 4891052 4891394 -245796460 - L2 LINE L2 -801 2513 2175 1337 219 34 70 chr2 4891512 4891811 -245796043 - MLT1A2 LTR MaLR 0 374 91 2123 182 79 89 chr2 4891811 4892371 -245795483 - MLT2B3 LTR ERVL 0 554 1 1337 219 34 70 chr2 4892371 4892459 -245795395 - MLT1A2 LTR MaLR -283 91 1 1699 219 102 2 chr2 4892965 4893385 -245794469 + MLT1C LTR MaLR 1 462 -5 1553 212 0 7 chr2 4893916 4894208 -245793646 - AluJb SINE Alu -22 290 1 531 218 69 75 chr2 4894386 4894429 -245793425 - MIR SINE MIR -8 254 212 264 77 0 0 chr2 4894429 4894468 -245793386 + (CA)n Simple_repeat Simple_repeat 2 40 0 531 218 69 75 chr2 4894468 4894526 -245793328 - MIR SINE MIR -50 212 155 2849 109 3 3 chr2 4894526 4894901 -245792953 + THE1C LTR MaLR 1 375 0 531 218 69 75 chr2 4894901 4894986 -245792868 - MIR SINE MIR -107 155 68 214 319 90 54 chr2 4895045 4895211 -245792643 - L2 LINE L2 -919 2395 2224 635 318 60 22 chr2 4895438 4896275 -245791579 + L1ME3 LINE L1 5036 5932 -230 2198 213 33 27 chr2 4896675 4896712 -245791142 - MLT2B1 LTR ERVL 0 520 485 243 0 0 0 chr2 4896712 4896739 -245791115 + (TG)n Simple_repeat Simple_repeat 2 28 0 2198 213 33 27 chr2 4896739 4897218 -245790636 - MLT2B1 LTR ERVL -35 485 1 356 290 0 0 chr2 4897702 4897802 -245790052 - MER91B DNA MER1_type -40 150 51 27 0 0 0 chr2 4899718 4899745 -245788109 + AT_rich Low_complexity Low_complexity 1 27 0 761 243 0 7 chr2 4900131 4900279 -245787575 + FRAM SINE Alu 4 150 -26 2407 82 0 13 chr2 4900281 4900585 -245787269 - AluSc SINE Alu -9 300 1 39 38 0 0 chr2 4900585 4900638 -245787216 + AT_rich Low_complexity Low_complexity 1 53 0 458 277 3 2 chr2 4902049 4902172 -245785682 - MLT1E2 LTR MaLR -202 424 262 894 289 53 73 chr2 4902221 4902594 -245785260 + HAL1 LINE L1 1054 1406 -1101 2277 111 0 16 chr2 4902594 4902909 -245784945 + AluSg SINE Alu 1 310 0 894 289 53 73 chr2 4902909 4903301 -245784553 + HAL1 LINE L1 1406 1804 -703 480 151 2 8 chr2 4904128 4904216 -245783638 + L1PB1 LINE L1 5698 5782 -369 419 147 39 0 chr2 4904235 4904337 -245783517 + (TA)n Simple_repeat Simple_repeat 1 106 0 2981 65 3 13 chr2 4904337 4904709 -245783145 + L1PB1 LINE L1 5782 6149 -2 2097 116 0 3 chr2 4905083 4905401 -245782453 - AluSq SINE Alu 0 317 1 2330 70 3 7 chr2 4905659 4905958 -245781896 + AluY SINE Alu 1 298 -13 2179 128 3 0 chr2 4956082 4956386 -245731468 + AluSx SINE Alu 1 305 -7 403 349 17 6 chr2 4956528 4956700 -245731154 + L2 LINE L2 2606 2779 -535 1932 135 0 0 chr2 4956757 4957024 -245730830 - AluSx SINE Alu -45 267 1 185 349 0 12 chr2 4958095 4958178 -245729676 - MIR SINE MIR -44 218 137 287 279 146 24 chr2 4958302 4958467 -245729387 + L1ME LINE L1 5420 5604 -560 2011 133 13 3 chr2 4958979 4959280 -245728574 - AluSp SINE Alu -5 308 5 995 209 33 113 chr2 4959564 4959961 -245727893 - MLT1A1 LTR MaLR 0 365 1 220 298 0 0 chr2 4959980 4960037 -245727817 - L3 LINE CR1 -1 1576 1520 289 330 30 88 chr2 4960166 4960463 -245727391 - L2 LINE L2 0 3272 2993 401 294 44 7 chr2 4960674 4960810 -245727044 + MIR3 SINE MIR 6 146 -62 412 264 65 75 chr2 4961490 4961691 -245726163 - MIR SINE MIR -34 228 30 360 43 0 0 chr2 4962330 4962376 -245725478 + (CA)n Simple_repeat Simple_repeat 1 46 0 354 287 25 0 chr2 4962407 4962529 -245725325 + MER112 DNA MER1_type 136 260 0 260 146 39 59 chr2 4962763 4963157 -245724697 + (TA)n Simple_repeat Simple_repeat 1 386 0 440 293 67 34 chr2 4963247 4963455 -245724399 + L2 LINE L2 3099 3313 0 184 50 100 0 chr2 4964601 4964641 -245723213 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 347 226 89 24 chr2 4965363 4965531 -245722323 - Looper DNA T2_type -10 1548 1370 * 557 264 6 0 chr2 4965524 4965687 -245722167 - Looper DNA T2_type -598 960 797 521 255 50 0 chr2 4965759 4965920 -245721934 - MER3 DNA MER1_type -20 189 21 550 195 8 0 chr2 4965930 4966048 -245721806 - L1MB1 LINE L1 -340 5828 5710 1762 138 138 9 chr2 4966089 4966438 -245721416 + MSTA LTR MaLR 2 395 -33 1929 161 0 25 chr2 4966440 4966756 -245721098 - AluJo SINE Alu -4 308 1 556 143 10 0 chr2 4966773 4966871 -245720983 - L1MA7 LINE L1 -304 5987 5889 855 299 92 9 chr2 4966880 4967208 -245720646 + LTR40a LTR ERVL 164 518 -1 1499 214 70 34 chr2 4967218 4967717 -245720137 - Looper DNA T2_type -989 569 53 1031 228 14 0 chr2 4968550 4968761 -245719093 - MER58A DNA MER1_type -9 215 2 2403 201 8 10 chr2 4969976 4970499 -245717355 - L1MB7 LINE L1 0 6184 5663 266 286 162 12 chr2 4970739 4970885 -245716969 + MIR SINE MIR 12 176 -86 479 222 43 43 chr2 4971412 4971574 -245716280 - MER20 DNA MER1_type -53 166 5 1264 291 106 39 chr2 4971588 4972614 -245715240 - L1MEc LINE L1 -4342 2054 921 3680 105 2 0 chr2 4972614 4973127 -245714727 - MER75 DNA T2_type 0 514 1 1264 291 106 39 chr2 4973127 4973404 -245714450 - L1MEc LINE L1 -5475 921 664 201 337 20 31 chr2 4973459 4973557 -245714297 - MER5B DNA MER1_type -77 101 5 1906 150 7 7 chr2 4973622 4973916 -245713938 + AluSx SINE Alu 1 294 -18 226 204 0 0 chr2 4974312 4974356 -245713498 - MER58 DNA MER1_type 0 2420 2377 326 297 64 18 chr2 4974356 4974575 -245713279 - L1MEc LINE L1 -6117 279 51 2003 167 6 6 chr2 4975375 4975711 -245712143 - MER1B DNA MER1_type -1 336 1 210 327 139 0 chr2 4975766 4975867 -245711987 - L2 LINE L2 -8 3264 3150 273 282 13 0 chr2 4976290 4976368 -245711486 + L2 LINE L2 3193 3271 -1 210 71 0 0 chr2 4977005 4977033 -245710821 + (T)n Simple_repeat Simple_repeat 1 28 0 695 255 145 33 chr2 4977808 4978263 -245709591 - HAL1 LINE L1 -125 2382 1877 578 240 125 72 chr2 4978316 4978620 -245709234 - HAL1 LINE L1 -714 1793 1474 1417 241 27 22 chr2 4979829 4980198 -245707656 + MLT1A2 LTR MaLR 1 371 -3 198 0 0 0 chr2 4981542 4981564 -245706290 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 996 233 72 43 chr2 4982261 4982609 -245705245 - MLT1C LTR MaLR -104 363 6 2337 104 0 7 chr2 4982663 4982972 -245704882 + AluSq SINE Alu 1 307 -6 871 270 131 18 chr2 4984019 4984522 -245703332 + L1ME4a LINE L1 5557 6116 -5 1864 151 0 7 chr2 4985173 4985458 -245702396 + AluSx SINE Alu 21 303 -9 22 35 0 0 chr2 4985523 4985552 -245702302 + AT_rich Low_complexity Low_complexity 1 29 0 1565 109 60 0 chr2 4985901 4986168 -245701686 + AluSc SINE Alu 1 283 -26 306 381 23 11 chr2 4987828 4988004 -245699850 + MIR3 SINE MIR 12 189 -19 275 271 42 25 chr2 4989624 4989742 -245698112 + MIR SINE MIR 96 215 -47 780 243 132 70 chr2 4990649 4991036 -245696818 - MLT2D LTR ERVL -2 412 2 1630 179 0 25 chr2 4991081 4991366 -245696488 + AluJo SINE Alu 35 312 0 447 297 92 41 chr2 4991815 4991957 -245695897 - MIR SINE MIR -23 239 83 2150 160 78 10 chr2 4991957 4992357 -245695497 - MSTA LTR MaLR 0 428 2 447 297 92 41 chr2 4992357 4992409 -245695445 - MIR SINE MIR -179 83 35 285 314 121 24 chr2 4992794 4993001 -245694853 + MLT1K LTR MaLR 326 552 -36 205 148 19 19 chr2 4993539 4993593 -245694261 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 255 40 40 20 chr2 4994269 4994319 -245693535 + (TA)n Simple_repeat Simple_repeat 2 52 0 1603 160 8 8 chr2 4995115 4995378 -245692476 + AluSx SINE Alu 48 310 -2 278 93 56 37 chr2 4995965 4996073 -245691781 + (TA)n Simple_repeat Simple_repeat 2 111 0 2162 148 0 0 chr2 4996734 4997039 -245690815 - AluSx SINE Alu -7 305 1 1833 133 35 0 chr2 4997232 4997538 -245690316 - AluSx SINE Alu 0 333 19 442 320 131 10 chr2 4998315 4998712 -245689142 - L2 LINE L2 -17 3296 2852 207 369 46 31 chr2 4998957 4999087 -245688767 - L2 LINE L2 0 3272 3141 2127 185 49 21 chr2 4999357 4999785 -245688069 + MLT1C LTR MaLR 28 467 0 283 314 163 33 chr2 5000851 5001182 -245686672 - MLT1I LTR MaLR -35 374 1 2288 108 3 3 chr2 5001239 5001546 -245686308 + AluSp SINE Alu 1 307 -6 193 313 50 0 chr2 5002496 5002576 -245685278 + MIR SINE MIR 46 129 -133 370 240 164 27 chr2 5002785 5002931 -245684923 + L1MC5 LINE L1 7746 7911 -50 235 330 139 0 chr2 5003428 5003543 -245684311 - MIR3 SINE MIR -63 145 15 285 316 0 21 chr2 5004100 5004195 -245683659 + L2 LINE L2 3175 3267 -5 279 161 0 0 chr2 5004351 5004407 -245683447 + (TG)n Simple_repeat Simple_repeat 1 56 0 609 263 60 23 chr2 5004517 5004734 -245683120 + MIR SINE MIR 13 237 -25 1592 157 39 14 chr2 5004822 5005102 -245682752 - AluJb SINE Alu -25 287 1 250 311 41 8 chr2 5006493 5006615 -245681239 - L1ME4a LINE L1 -6 6115 5990 1071 93 17 29 chr2 5006682 5006854 -245681000 - L1PA13 LINE L1 -1 6162 5993 786 256 40 4 chr2 5006892 5007119 -245680735 - MIR SINE MIR -21 241 7 23 33 0 0 chr2 5007523 5007553 -245680301 + AT_rich Low_complexity Low_complexity 1 30 0 279 287 172 0 chr2 5007658 5007780 -245680074 - L1MC4 LINE L1 -375 7667 7525 251 204 37 0 chr2 5008616 5008670 -245679184 - MIR SINE MIR -192 70 15 821 173 84 35 chr2 5010617 5010843 -245677011 + L1MB7 LINE L1 5947 6183 -1 2114 119 3 22 chr2 5010982 5011301 -245676553 - AluSp SINE Alu 0 313 1 7102 53 6 11 chr2 5012339 5013769 -245674085 + L1PA7 LINE L1 4727 6151 -3 2002 208 57 5 chr2 5013782 5014224 -245673630 + MLT1C LTR MaLR 3 467 0 244 48 48 0 chr2 5015433 5015475 -245672379 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 288 53 0 0 chr2 5015826 5015864 -245671990 + (TG)n Simple_repeat Simple_repeat 2 39 0 2020 140 10 13 chr2 5018132 5018439 -245669415 - AluSx SINE Alu -6 306 1 379 259 54 22 chr2 5020602 5020787 -245667067 + LTR16B LTR ERVL 187 377 -87 201 178 0 0 chr2 5023066 5023111 -245664743 - MER5A DNA MER1_type -22 167 123 1000 36 15 15 chr2 5023394 5023531 -245664323 + (GAAA)n Simple_repeat Simple_repeat 2 138 0 2849 13 0 0 chr2 5024244 5024552 -245663302 - AluYa5 SINE Alu -3 308 1 208 199 122 5 chr2 5025013 5025081 -245662773 + MIR SINE MIR 49 123 -85 2185 289 77 36 chr2 5026614 5027817 -245660037 + L2 LINE L2 1157 2408 -906 431 324 78 15 chr2 5028275 5028735 -245659119 + L2 LINE L2 2820 3308 -5 360 349 94 5 chr2 5029726 5029918 -245657936 + MIR SINE MIR 2 210 -52 241 301 211 36 chr2 5030098 5030377 -245657477 - L2 LINE L2 0 3272 2945 1936 178 108 11 chr2 5030428 5030861 -245656993 - L1MB3 LINE L1 -1 6182 5708 515 286 19 7 chr2 5030870 5031024 -245656830 + L2 LINE L2 3153 3308 -5 257 300 42 50 chr2 5031042 5031162 -245656692 - MIR SINE MIR -73 189 71 226 298 7 80 chr2 5031206 5031357 -245656497 + MIR SINE MIR 15 154 -108 213 289 24 12 chr2 5031558 5031641 -245656213 + MIR SINE MIR 62 145 -63 4447 152 26 1 chr2 5032359 5033076 -245654778 - L1PB4 LINE L1 -8 6148 5414 426 293 112 21 chr2 5034542 5034730 -245653124 - MIR SINE MIR -30 232 28 205 250 0 0 chr2 5034837 5034881 -245652973 - L2 LINE L2 -556 2758 2715 221 186 17 68 chr2 5035563 5035622 -245652232 - L2 LINE L2 -14 3258 3203 296 286 105 9 chr2 5035740 5035845 -245652009 + MIR SINE MIR 34 148 -114 210 284 82 75 chr2 5037682 5037816 -245650038 + MIR SINE MIR 48 182 -80 555 281 44 78 chr2 5037877 5038025 -245649829 - L2 LINE L2 -4 3309 3157 2078 115 14 0 chr2 5038025 5038311 -245649543 - AluSq SINE Alu -18 295 6 555 281 44 78 chr2 5038311 5038482 -245649372 - L2 LINE L2 -156 3157 3001 327 263 182 0 chr2 5039976 5040075 -245647779 + L2 LINE L2 3142 3258 -14 21 36 0 0 chr2 5040559 5040587 -245647267 + AT_rich Low_complexity Low_complexity 1 28 0 383 293 84 22 chr2 5040682 5040843 -245647011 + MIR3 SINE MIR 20 193 -15 1741 172 10 3 chr2 5041505 5041808 -245646046 - AluJb SINE Alu -5 307 3 2751 23 3 0 chr2 5041936 5042245 -245645609 - AluYa5 SINE Alu -1 310 1 1869 233 40 12 chr2 5042742 5043245 -245644609 + MER97a DNA MER1_type? 369 885 -9 238 299 122 20 chr2 5043569 5043716 -245644138 + MIR SINE MIR 74 235 -27 269 100 20 0 chr2 5043823 5043873 -245643981 + (TC)n Simple_repeat Simple_repeat 1 51 0 211 319 0 0 chr2 5043881 5043950 -245643904 + (CATA)n Simple_repeat Simple_repeat 3 71 0 261 153 82 0 chr2 5045008 5045064 -245642790 - MLT2B3 LTR ERVL 0 554 394 209 184 0 0 chr2 5045064 5045102 -245642752 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 736 144 17 22 chr2 5045102 5045282 -245642572 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2473 153 113 17 chr2 5045318 5045789 -245642065 - MLT2B3 LTR ERVL -38 516 1 299 272 72 32 chr2 5048526 5048651 -245639203 - L2 LINE L2 -1 3271 3142 341 327 48 48 chr2 5049919 5050170 -245637684 - L3 LINE CR1 -72 1505 1255 243 313 90 8 chr2 5050605 5050739 -245637115 - MIR SINE MIR -8 254 110 638 227 39 0 chr2 5052745 5052899 -245634955 + L1MD1 LINE L1 6083 6242 0 25 0 0 0 chr2 5053996 5054021 -245633833 + AT_rich Low_complexity Low_complexity 1 25 0 218 167 24 0 chr2 5054076 5054118 -245633736 - MIR SINE MIR -112 150 108 201 238 129 20 chr2 5054322 5054423 -245633431 - MIR SINE MIR -77 131 20 304 323 21 21 chr2 5054488 5054584 -245633270 + MIR SINE MIR 21 116 -92 24 0 0 0 chr2 5054768 5054792 -245633062 + AT_rich Low_complexity Low_complexity 1 24 0 3445 158 10 22 chr2 5054817 5054984 -245632870 - L1MA5 LINE L1 0 6300 6132 949 175 0 19 chr2 5054984 5055144 -245632710 + FRAM SINE Alu 1 157 -9 3445 158 10 22 chr2 5055144 5055601 -245632253 - L1MA5 LINE L1 -168 6132 5684 2338 197 3 37 chr2 5055601 5056146 -245631708 + L1MA5 LINE L1 5159 5664 -636 606 240 67 0 chr2 5056179 5056329 -245631525 - MER5A DNA MER1_type -29 160 1 384 88 0 0 chr2 5057364 5057421 -245630433 + (CA)n Simple_repeat Simple_repeat 1 57 0 352 284 0 0 chr2 5058486 5058567 -245629287 - L2 LINE L2 0 3313 3233 264 322 96 9 chr2 5058849 5058964 -245628890 + MIR SINE MIR 20 144 -118 313 287 111 28 chr2 5059200 5059416 -245628438 - HsTC2 DNA Tc2 -1020 878 645 2373 87 7 0 chr2 5059583 5059881 -245627973 + AluSc SINE Alu 2 301 -8 21 36 0 0 chr2 5060002 5060030 -245627824 + AT_rich Low_complexity Low_complexity 1 28 0 213 235 0 29 chr2 5060617 5060685 -245627169 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 242 293 49 0 chr2 5060965 5061047 -245626807 - HsTC2 DNA Tc2 -1329 569 484 * 264 247 13 13 chr2 5061040 5061117 -245626737 - HsTC2 DNA Tc2 -1597 301 225 1976 50 138 4 chr2 5061117 5061377 -245626477 - AluY SINE Alu -6 295 1 22 0 0 0 chr2 5062273 5062295 -245625559 + AT_rich Low_complexity Low_complexity 1 22 0 5015 181 17 13 chr2 5062304 5062684 -245625170 + Tigger3b DNA MER2_type 1 378 -2650 1916 117 50 7 chr2 5062684 5062991 -245624863 - AluSx SINE Alu 0 312 1 5015 181 17 13 chr2 5062991 5063678 -245624176 + Tigger3b DNA MER2_type 378 1231 0 1770 257 82 12 chr2 5063971 5064579 -245623275 - L1MD3 LINE L1 -2 7980 7150 1576 186 133 9 chr2 5064626 5064971 -245622883 - MLT1B LTR MaLR 0 390 3 201 171 24 0 chr2 5065869 5065910 -245621944 + (TG)n Simple_repeat Simple_repeat 2 43 0 311 279 91 61 chr2 5066418 5066615 -245621239 - L2 LINE L2 -4 3309 3107 785 225 108 95 chr2 5067108 5067451 -245620403 - MLT1H LTR MaLR -5 544 148 2082 116 0 26 chr2 5067451 5067753 -245620101 + AluSc SINE Alu 1 294 -15 785 225 108 95 chr2 5067753 5067889 -245619965 - MLT1H LTR MaLR -401 148 15 552 246 75 73 chr2 5068468 5068879 -245618975 + L1MEd LINE L1 823 1234 -4885 310 333 91 29 chr2 5068892 5069135 -245618719 + L1MEd LINE L1 1233 1490 -4639 2161 144 33 33 chr2 5069276 5069638 -245618216 - THE1B LTR MaLR 0 364 3 302 293 78 42 chr2 5071081 5071248 -245616606 + MIR SINE MIR 71 243 -19 285 294 37 37 chr2 5071282 5071391 -245616463 + L3 LINE CR1 1378 1486 -91 186 313 0 0 chr2 5071394 5071442 -245616412 + L2 LINE L2 3212 3259 -13 239 203 31 16 chr2 5071754 5071818 -245616036 - Charlie8 DNA MER1_type -2221 196 132 279 323 39 47 chr2 5072800 5072927 -245614927 + MIR SINE MIR 18 143 -119 341 172 0 0 chr2 5073553 5073611 -245614243 - L1PA16 LINE L1 -200 5966 5909 22 0 0 0 chr2 5074605 5074627 -245613227 + AT_rich Low_complexity Low_complexity 1 22 0 1494 162 4 4 chr2 5074641 5074870 -245612984 - AluSx SINE Alu -31 281 53 401 279 55 64 chr2 5075235 5075454 -245612400 - L2 LINE L2 -5 3308 3092 4683 109 8 5 chr2 5075753 5076392 -245611462 - L1PA10 LINE L1 -11 6157 5517 221 408 17 11 chr2 5076854 5077033 -245610821 + MIR SINE MIR 27 206 -56 212 348 0 0 chr2 5077150 5077219 -245610635 + L2 LINE L2 3204 3272 0 949 234 161 57 chr2 5077704 5078370 -245609484 - HAL1 LINE L1 -83 2424 1690 1039 258 119 34 chr2 5078460 5078729 -245609125 - HAL1 LINE L1 -647 1860 1537 2019 129 7 13 chr2 5078729 5079088 -245608766 + AluSx SINE Alu 1 312 0 1039 258 119 34 chr2 5079088 5079264 -245608590 - HAL1 LINE L1 -970 1537 1377 660 256 76 19 chr2 5079675 5079937 -245607917 - HAL1 LINE L1 -1119 1388 1112 589 302 109 13 chr2 5079963 5080274 -245607580 - HAL1 LINE L1 -1540 967 627 1182 238 32 18 chr2 5080475 5080757 -245607097 - HAL1 LINE L1 -2208 299 14 182 322 132 40 chr2 5080925 5081099 -245606755 - MIR SINE MIR 0 262 73 291 334 62 15 chr2 5081657 5081821 -245606033 + MIR SINE MIR 5 171 -37 32 0 0 0 chr2 5081868 5081900 -245605954 + AT_rich Low_complexity Low_complexity 1 32 0 532 330 84 44 chr2 5082054 5082471 -245605383 + L2 LINE L2 2204 2644 -670 2718 116 36 3 chr2 5082471 5082834 -245605020 + THE1C LTR MaLR 1 375 0 532 330 84 44 chr2 5082834 5082894 -245604960 + L2 LINE L2 2644 2700 -614 309 297 89 0 chr2 5083255 5083356 -245604498 + L2 LINE L2 3204 3313 0 203 224 20 0 chr2 5083431 5083480 -245604374 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 305 89 0 0 chr2 5086406 5086451 -245601403 + AluSc SINE Alu 253 297 -2 2631 51 0 0 chr2 5086718 5087029 -245600825 - AluYa5 SINE Alu 0 311 1 228 347 0 21 chr2 5088041 5088136 -245599718 + MIR SINE MIR 24 116 -92 2380 85 3 0 chr2 5088219 5088526 -245599328 - AluY SINE Alu -3 308 1 2092 104 42 3 chr2 5089525 5089813 -245598041 + AluSx SINE Alu 2 300 -12 388 293 129 30 chr2 5090177 5090409 -245597445 + MLT1J2 LTR MaLR 48 302 -148 213 21 21 83 chr2 5090697 5090745 -245597109 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 446 235 18 12 chr2 5091023 5091189 -245596665 + GA-rich Low_complexity Low_complexity 1 167 0 291 343 71 7 chr2 5092389 5092529 -245595325 + MIR SINE MIR 20 168 -94 181 362 48 38 chr2 5092636 5092741 -245595113 - L2 LINE L2 -22 3250 3145 2301 52 38 17 chr2 5092948 5093238 -245594616 + AluY SINE Alu 1 296 -15 276 322 86 53 chr2 5093788 5093940 -245593914 - L2 LINE L2 -4 3268 3112 232 360 35 9 chr2 5094759 5094873 -245592981 - MIR SINE MIR -76 132 16 260 341 31 23 chr2 5096467 5096596 -245591258 - MER5B DNA MER1_type -44 134 5 2000 137 3 0 chr2 5096661 5096954 -245590900 + AluSx SINE Alu 1 294 -18 248 111 0 0 chr2 5099336 5099372 -245588482 - U2 snRNA snRNA -152 36 1 328 177 51 0 chr2 5099388 5099467 -245588387 - MIR SINE MIR -115 147 65 2289 75 0 4 chr2 5099471 5099819 -245588035 - AluY SINE Alu 0 347 1 291 54 0 0 chr2 5100593 5100630 -245587224 + (TATG)n Simple_repeat Simple_repeat 2 38 0 256 131 16 16 chr2 5101029 5101090 -245586764 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 793 337 38 27 chr2 5101103 5101673 -245586181 - L2 LINE L2 0 3313 2737 776 226 27 27 chr2 5101696 5101882 -245585972 + MLT2B1 LTR ERVL 1 186 -334 1912 197 33 3 chr2 5102057 5102423 -245585431 + MLT2B1 LTR ERVL 144 520 0 404 351 71 14 chr2 5102440 5102651 -245585203 - L2 LINE L2 -605 2709 2487 22 0 0 0 chr2 5103391 5103413 -245584441 + AT_rich Low_complexity Low_complexity 1 22 0 887 192 0 11 chr2 5103420 5103656 -245584198 - AluJb SINE Alu -17 295 1 276 30 0 0 chr2 5103674 5103707 -245584147 + (A)n Simple_repeat Simple_repeat 1 33 0 2152 297 158 22 chr2 5104046 5105238 -245582616 + L2 LINE L2 1933 3277 -36 2094 132 0 0 chr2 5105431 5105726 -245582128 - AluSx SINE Alu -17 295 1 21 57 0 0 chr2 5105829 5105864 -245581990 + AT_rich Low_complexity Low_complexity 1 35 0 22799 104 3 2 chr2 5105962 5109890 -245577964 - L1PA7 LINE L1 -4 6465 2541 1620 127 17 0 chr2 5109898 5110135 -245577719 - L1PA7 LINE L1 -6213 248 8 551 282 23 0 chr2 5110473 5110693 -245577161 - L1MEc LINE L1 -5466 930 706 467 366 51 15 chr2 5110709 5111040 -245576814 - L1MEc LINE L1 -5941 455 113 1034 204 194 142 chr2 5111048 5111828 -245576026 + MER52A LTR ERV1 667 1486 -269 433 252 16 16 chr2 5111822 5111949 -245575905 + MER52A LTR ERV1 1599 1725 -30 * 236 288 0 0 chr2 5112173 5112246 -245575608 - MER5A DNA MER1_type -113 76 4 231 351 14 0 chr2 5113071 5113145 -245574709 - L2 LINE L2 -206 3066 2992 362 343 30 18 chr2 5113159 5113325 -245574529 + MIR SINE MIR 42 209 -53 1499 227 41 78 chr2 5113337 5113822 -245574032 + MLT1C LTR MaLR 1 467 0 292 283 186 0 chr2 5115119 5115232 -245572622 - L2 LINE L2 -1 3312 3179 455 251 123 18 chr2 5115588 5115751 -245572103 + MIR SINE MIR 2 181 -81 246 358 13 20 chr2 5116468 5116619 -245571235 - MIR3 SINE MIR -4 204 55 228 304 33 22 chr2 5117251 5117343 -245570511 - MIR3 SINE MIR -3 205 113 194 294 0 0 chr2 5118591 5118642 -245569212 - MIR SINE MIR -65 143 93 195 352 62 52 chr2 5119785 5119978 -245567876 + MIR SINE MIR 20 214 -48 227 240 132 107 chr2 5120081 5120202 -245567652 + MIR SINE MIR 61 184 -78 393 239 97 13 chr2 5120239 5120394 -245567460 - MIR SINE MIR -14 248 81 1044 232 30 4 chr2 5122191 5122424 -245565430 + MLT1B LTR MaLR 152 390 0 2540 133 11 3 chr2 5122575 5122936 -245564918 - THE1B LTR MaLR 0 364 1 1254 272 32 3 chr2 5122972 5123343 -245564511 + L1ME2 LINE L1 3938 4319 -1827 888 262 40 15 chr2 5123395 5123723 -245564131 + L1ME2 LINE L1 4409 4744 -1402 1091 280 35 8 chr2 5123723 5124327 -245563527 + L1ME2 LINE L1 4996 5616 -550 1096 217 122 9 chr2 5124339 5124845 -245563009 - MLT1E1 LTR MaLR -14 640 1 1771 235 43 50 chr2 5124852 5125412 -245562442 + L1ME2 LINE L1 5617 6332 -2 223 344 86 6 chr2 5129252 5129415 -245558439 - L3 LINE CR1 -570 1007 832 313 255 0 85 chr2 5129452 5129558 -245558296 - MIR SINE MIR -7 255 159 328 292 101 17 chr2 5129955 5130133 -245557721 + MIR SINE MIR 8 200 -62 195 282 14 28 chr2 5130535 5130606 -245557248 + MIR SINE MIR 69 138 -124 6177 166 59 20 chr2 5131805 5132544 -245555310 + Tigger3b DNA MER2_type 1 805 -2223 1552 190 35 7 chr2 5132544 5132834 -245555020 + AluJb SINE Alu 1 298 -14 6177 166 59 20 chr2 5132834 5133278 -245554576 + Tigger3b DNA MER2_type 805 1230 -1 2544 38 0 0 chr2 5133671 5133961 -245553893 - AluY SINE Alu -21 290 1 323 311 0 0 chr2 5134009 5134099 -245553755 + L1MC4 LINE L1 6614 6703 -1339 237 183 50 0 chr2 5134116 5134176 -245553678 + L1MCa LINE L1 2006 2068 -4358 * 258 256 47 0 chr2 5134143 5134229 -245553625 - L1MC4 LINE L1 -1339 6703 6614 207 100 0 0 chr2 5134234 5134264 -245553590 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 174 0 0 chr2 5134269 5134315 -245553539 - LTR66 LTR ERVL -171 439 394 234 191 0 0 chr2 5134277 5134324 -245553530 + LTR66 LTR ERVL 394 440 -170 * 236 131 16 66 chr2 5134348 5134409 -245553445 - LTR66 LTR ERVL -171 439 382 197 175 38 12 chr2 5134616 5134630 -245553224 + (TA)n Simple_repeat Simple_repeat 1 13 -69 1912 99 8 8 chr2 5134630 5134893 -245552961 + AluSc SINE Alu 35 297 -12 197 175 38 12 chr2 5134893 5134958 -245552896 + (TA)n Simple_repeat Simple_repeat 13 82 0 827 281 68 35 chr2 5137111 5137631 -245550223 + L1ME LINE L1 1071 1553 -4873 1148 248 73 29 chr2 5137665 5138241 -245549613 + L1ME LINE L1 5290 5889 -557 1899 201 70 27 chr2 5138241 5138685 -245549169 - MLT1C LTR MaLR 0 467 5 1148 248 73 29 chr2 5138685 5138723 -245549131 + L1ME LINE L1 5889 5924 -522 877 120 0 0 chr2 5139408 5139563 -245548291 + AluSp/q SINE Alu 168 322 0 6571 63 141 13 chr2 5139702 5140599 -245547255 - L1PA5 LINE L1 0 6154 5228 23274 54 3 0 chr2 5140702 5143630 -245544224 - L1P LINE L1 -818 5328 2391 230 175 79 48 chr2 5144855 5144918 -245542936 - MLT1G1 LTR MaLR -1 554 490 1403 72 0 15 chr2 5144924 5145119 -245542735 - AluY SINE Alu -13 298 107 338 250 126 18 chr2 5145120 5145473 -245542381 - MLT1G1 LTR MaLR -66 529 83 253 336 77 10 chr2 5145676 5145780 -245542074 - MIR3 SINE MIR -84 124 14 209 265 0 0 chr2 5146240 5146289 -245541565 - MIR SINE MIR -56 206 158 940 219 73 155 chr2 5146513 5146964 -245540890 + MLT2B1 LTR ERVL 1 414 0 23 78 0 0 chr2 5147857 5147908 -245539946 + AT_rich Low_complexity Low_complexity 1 51 0 21 82 0 0 chr2 5198933 5198982 -245488872 + AT_rich Low_complexity Low_complexity 1 49 0 2714 214 78 0 chr2 5198986 5199562 -245488292 + L1M2b LINE L1 184 804 -6405 3369 209 33 23 chr2 5199573 5200429 -245487425 + L1M2b LINE L1 1568 2431 -4778 309 286 118 8 chr2 5200785 5200904 -245486950 - MIR SINE MIR -6 256 125 2298 87 7 10 chr2 5200921 5201221 -245486633 + AluSq SINE Alu 1 299 -14 601 158 44 3 chr2 5201541 5201672 -245486182 - L1MA4 LINE L1 -143 6148 6015 601 214 71 0 chr2 5201673 5201813 -245486041 + L1MA4 LINE L1 6151 6300 0 219 366 62 22 chr2 5202397 5202624 -245485230 - MIR SINE MIR -6 256 21 229 278 135 32 chr2 5203707 5203833 -245484021 + L2 LINE L2 3112 3250 -22 4989 230 19 11 chr2 5205205 5206444 -245481410 + L1M1 LINE L1 480 2407 -5158 2048 160 16 34 chr2 5207802 5208190 -245479664 + L1MC1 LINE L1 5939 6319 -14 24 32 0 0 chr2 5208221 5208252 -245479602 + AT_rich Low_complexity Low_complexity 1 31 0 1541 209 39 7 chr2 5208256 5208538 -245479316 - AluJb SINE Alu -11 291 1 185 266 129 73 chr2 5208680 5208804 -245479050 + MIR3 SINE MIR 67 197 -11 876 204 72 19 chr2 5209175 5209521 -245478333 + MER4B-int LTR ERV1 1702 2960 -2362 * 1032 211 45 59 chr2 5209507 5210292 -245477562 + MER4B-int LTR ERV1 1546 2439 -4319 2568 48 3 10 chr2 5211070 5211383 -245476471 + AluY SINE Alu 1 311 0 280 278 43 81 chr2 5212023 5212140 -245475714 - LTR33 LTR ERVL -19 502 395 2520 192 108 27 chr2 5212140 5212610 -245475244 + MLT2B3 LTR ERVL 3 519 -35 477 34 0 0 chr2 5212610 5212669 -245475185 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2520 192 108 27 chr2 5212669 5212709 -245475145 + MLT2B3 LTR ERVL 519 554 0 280 278 43 81 chr2 5212709 5212800 -245475054 - LTR33 LTR ERVL -126 395 302 319 352 23 16 chr2 5213027 5213155 -245474699 - MIR SINE MIR -62 146 18 457 288 65 0 chr2 5213534 5213673 -245474181 - MIR3 SINE MIR -31 177 30 314 307 98 7 chr2 5213813 5213966 -245473888 + MER5A DNA MER1_type 17 183 -6 192 218 64 77 chr2 5214071 5214149 -245473705 - L2 LINE L2 -6 3307 3231 2747 13 7 0 chr2 5214417 5214721 -245473133 - AluYa5 SINE Alu -5 306 1 1983 146 27 0 chr2 5214933 5215234 -245472620 - AluSx SINE Alu -2 310 2 193 243 68 27 chr2 5215309 5215383 -245472471 - MIR SINE MIR -66 142 66 208 402 0 0 chr2 5215678 5215780 -245472074 - MIR SINE MIR -113 149 48 525 301 49 30 chr2 5215924 5216127 -245471727 - MLT1H LTR MaLR -226 323 117 885 137 53 69 chr2 5216229 5216420 -245471434 + THE1B LTR MaLR 183 364 0 4376 225 26 38 chr2 5216420 5217292 -245470562 + L1M2 LINE L1 2633 3481 -3367 1667 177 20 7 chr2 5217292 5217586 -245470268 + AluJb SINE Alu 1 298 -14 4376 225 26 38 chr2 5217586 5218251 -245469603 + L1M2 LINE L1 3481 4152 -2696 789 161 25 6 chr2 5218351 5218512 -245469342 + L1M2 LINE L1 2010 2173 -4676 225 0 0 0 chr2 5218512 5218537 -245469317 + (CA)n Simple_repeat Simple_repeat 2 26 0 732 206 14 0 chr2 5218539 5218680 -245469174 + L1M2 LINE L1 2495 2637 -4212 2099 115 58 60 chr2 5218680 5219045 -245468809 + THE1B LTR MaLR 1 364 0 10894 105 37 4 chr2 5219046 5220574 -245467280 + THE1B-int LTR MaLR 2 1580 0 1232 167 13 35 chr2 5220574 5220802 -245467052 + THE1B LTR MaLR 1 223 -152 1272 231 23 13 chr2 5221912 5222211 -245465643 - AluJb SINE Alu 0 302 1 315 0 0 0 chr2 5222647 5222682 -245465172 + (TG)n Simple_repeat Simple_repeat 2 36 0 2022 124 3 3 chr2 5222710 5223008 -245464846 - AluY SINE Alu -13 298 1 527 276 33 28 chr2 5223020 5223031 -245464823 - L1M3c LINE L1 -4846 1119 1110 2205 89 4 0 chr2 5223031 5223312 -245464542 - AluY SINE Alu -29 282 1 527 276 33 28 chr2 5223312 5223514 -245464340 - L1M3c LINE L1 -4855 1110 898 24 67 0 0 chr2 5223572 5223617 -245464237 + AT_rich Low_complexity Low_complexity 1 45 0 1782 165 118 48 chr2 5223757 5223799 -245464055 - MSTA LTR MaLR 0 428 390 2252 143 21 26 chr2 5223799 5224176 -245463678 + THE1C LTR MaLR 1 375 0 1782 165 118 48 chr2 5224176 5224533 -245463321 - MSTA LTR MaLR -38 390 1 2072 172 6 0 chr2 5224534 5224894 -245462960 - MSTA-int LTR MaLR -1 1650 1289 385 188 25 0 chr2 5224894 5224974 -245462880 - MSTA-int LTR MaLR -1523 128 47 236 208 112 80 chr2 5225646 5225771 -245462083 + MIR SINE MIR 65 193 -69 2837 207 28 5 chr2 5225828 5226407 -245461447 - MER6A DNA MER2_type -13 592 1 1764 180 49 27 chr2 5226867 5227234 -245460620 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr2 5227996 5228016 -245459838 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1848 154 0 3 chr2 5228440 5228733 -245459121 - AluSg SINE Alu -10 300 9 188 353 67 34 chr2 5228923 5229042 -245458812 - MIR3 SINE MIR -83 125 3 3026 135 41 2 chr2 5229962 5230430 -245457424 - LTR19A LTR ERV1 0 486 1 2192 89 4 0 chr2 5231403 5231722 -245456132 + AluY SINE Alu 1 320 0 227 250 87 43 chr2 5232525 5232617 -245455237 + LTR16C LTR ERVL 394 489 -2 419 259 186 14 chr2 5232893 5233113 -245454741 + L1M4 LINE L1 4869 5126 -1020 319 189 0 14 chr2 5233111 5233185 -245454669 + L1ME2 LINE L1 6077 6149 -15 * 182 263 152 10 chr2 5233700 5233799 -245454055 + L2 LINE L2 3138 3250 -22 509 278 76 65 chr2 5237247 5237510 -245450344 - MLT1J LTR MaLR -244 267 2 195 235 0 0 chr2 5238578 5238629 -245449225 + (TG)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr2 5238751 5238789 -245449065 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 5239725 5239749 -245448105 + AT_rich Low_complexity Low_complexity 1 24 0 186 342 103 8 chr2 5242036 5242153 -245445701 + MIR SINE MIR 122 249 -13 236 281 70 0 chr2 5242340 5242397 -245445457 + MIR SINE MIR 66 126 -82 1698 206 28 0 chr2 5246118 5246574 -245441280 - MLT2B1 LTR ERVL 0 520 1 216 297 16 0 chr2 5247741 5247805 -245440049 - MIR SINE MIR -110 152 88 318 264 29 106 chr2 5249238 5249446 -245438408 + L1MEd LINE L1 332 523 -5596 396 0 0 0 chr2 5250087 5250131 -245437723 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr2 5250970 5250999 -245436855 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2127 101 11 0 chr2 5251000 5251277 -245436577 - AluSp SINE Alu -33 280 1 247 348 90 45 chr2 5252886 5253130 -245434724 - L2 LINE L2 -27 3245 2991 211 336 53 30 chr2 5253111 5253242 -245434612 - L2 LINE L2 -456 2858 2725 * 223 273 70 39 chr2 5253529 5253657 -245434197 - L2 LINE L2 -935 2379 2248 645 194 7 0 chr2 5253936 5254080 -245433774 + L1MA9 LINE L1 6166 6310 -2 1772 187 13 7 chr2 5254102 5254412 -245433442 + AluJb SINE Alu 1 312 0 345 292 81 27 chr2 5255503 5255688 -245432166 - MIR SINE MIR -9 253 59 2804 16 0 10 chr2 5255948 5256261 -245431593 + AluYa5 SINE Alu 1 310 -1 1584 214 13 34 chr2 5256522 5256901 -245430953 - MLT1A2 LTR MaLR -2 372 2 609 258 171 15 chr2 5256974 5257238 -245430616 + MLT1G1 LTR MaLR 291 595 0 466 299 71 51 chr2 5257985 5258377 -245429477 + L2 LINE L2 2914 3313 0 237 132 0 0 chr2 5259128 5259166 -245428688 + (TA)n Simple_repeat Simple_repeat 1 38 0 1237 91 0 141 chr2 5260237 5260391 -245427463 + MER30 DNA MER1_type 5 114 -116 1578 42 0 5 chr2 5260391 5260582 -245427272 - L1PA5 LINE L1 0 6154 5965 1237 91 0 141 chr2 5260582 5260669 -245427185 + MER30 DNA MER1_type 114 212 -18 199 61 61 0 chr2 5261958 5261991 -245425863 + A-rich Low_complexity Low_complexity 3 37 0 232 244 51 0 chr2 5262290 5262368 -245425486 - L1 LINE L1 -1161 4985 4904 2128 145 0 0 chr2 5262520 5262817 -245425037 - AluSx SINE Alu -15 297 1 516 325 42 0 chr2 5263951 5264155 -245423699 + HERVL LTR ERVL 4103 4366 -1398 220 353 17 17 chr2 5264694 5264813 -245423041 - MIR SINE MIR -107 155 37 1107 81 0 27 chr2 5265565 5265617 -245422237 + (GAAA)n Simple_repeat Simple_repeat 1 230 0 1107 81 0 27 chr2 5265617 5265802 -245422052 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 426 302 94 5 chr2 5266209 5266401 -245421453 - MIR SINE MIR -6 256 48 238 234 16 0 chr2 5267476 5267540 -245420314 - L2 LINE L2 -527 2787 2723 332 312 82 12 chr2 5267710 5267880 -245419974 + L2 LINE L2 3117 3298 -15 305 260 67 90 chr2 5270568 5270791 -245417063 - L1ME4a LINE L1 -1 6120 5903 325 239 34 15 chr2 5271243 5271272 -245416582 - L1ME4a LINE L1 -850 5296 5269 369 0 0 0 chr2 5271272 5271313 -245416541 + (TG)n Simple_repeat Simple_repeat 2 42 0 325 239 34 15 chr2 5271313 5271420 -245416434 - L1ME4a LINE L1 -877 5269 5157 7159 45 3 1 chr2 5271475 5272930 -245414924 - L1PA6 LINE L1 0 6154 4682 257 222 0 0 chr2 5272943 5273006 -245414848 - L1ME4a LINE L1 -985 5161 5099 1827 122 0 0 chr2 5274183 5274421 -245413433 + AluSx SINE Alu 1 238 -74 1682 150 3 77 chr2 5274828 5275201 -245412653 - MER4A LTR ERV1 0 664 261 656 98 10 49 chr2 5275201 5275303 -245412551 - MER4A LTR ERV1 -566 98 1 23 0 0 0 chr2 5275747 5275770 -245412084 + AT_rich Low_complexity Low_complexity 1 23 0 2213 129 0 3 chr2 5275775 5276084 -245411770 + AluSq SINE Alu 3 310 -3 225 272 0 65 chr2 5276089 5276181 -245411673 - MER5A DNA MER1_type -50 139 54 1629 199 141 111 chr2 5276429 5277333 -245410521 - LTR1B LTR ERV1 0 1020 1 268 244 103 0 chr2 5278474 5278552 -245409302 - L2 LINE L2 -17 3255 3170 22 0 0 0 chr2 5278875 5278897 -245408957 + AT_rich Low_complexity Low_complexity 1 22 0 762 120 0 0 chr2 5278929 5279037 -245408817 - L1MA3 LINE L1 -2 6303 6196 200 118 29 0 chr2 5279374 5279408 -245408446 + (CATA)n Simple_repeat Simple_repeat 4 38 0 237 196 0 0 chr2 5279416 5279472 -245408382 + (CA)n Simple_repeat Simple_repeat 2 57 0 570 291 12 36 chr2 5280295 5280546 -245407308 + MIR SINE MIR 12 256 -6 1637 173 0 11 chr2 5281480 5281746 -245406108 + AluJb SINE Alu 1 263 -49 2216 103 3 17 chr2 5281845 5282145 -245405709 + AluSg SINE Alu 1 296 -14 376 227 100 0 chr2 5283146 5283256 -245404598 - MER58B DNA MER1_type 0 341 221 1404 250 72 42 chr2 5283522 5284134 -245403720 - Charlie7 DNA MER1_type -263 2349 1720 469 312 24 5 chr2 5284174 5284379 -245403475 - Charlie7 DNA MER1_type -2070 542 334 225 179 143 36 chr2 5284408 5284464 -245403390 + Tigger5 DNA MER2_type 1 62 -2261 * 1574 139 12 0 chr2 5284462 5284714 -245403140 + Tigger5 DNA MER2_type 2062 2316 -7 436 341 36 14 chr2 5284737 5285013 -245402841 - Charlie7 DNA MER1_type -2330 282 1 451 228 19 6 chr2 5285337 5285654 -245402200 + (TG)n Simple_repeat Simple_repeat 1 321 0 437 206 11 22 chr2 5285707 5285887 -245401967 + (TG)n Simple_repeat Simple_repeat 1 178 0 410 214 11 22 chr2 5285933 5286111 -245401743 + (TG)n Simple_repeat Simple_repeat 1 176 0 784 209 91 5 chr2 5287379 5287589 -245400265 + L1MB8 LINE L1 5945 6172 -6 243 0 0 0 chr2 5288305 5288332 -245399522 + (A)n Simple_repeat Simple_repeat 1 27 0 971 268 166 13 chr2 5288872 5289324 -245398530 + MLT1H LTR MaLR 4 524 -25 263 263 22 0 chr2 5289907 5289980 -245397874 + MIR SINE MIR 45 121 -87 366 297 79 42 chr2 5290604 5290769 -245397085 - MIR3 SINE MIR -10 198 28 2663 87 34 8 chr2 5291183 5291563 -245396291 + MLT2A1 LTR ERVL 1 390 -54 222 37 0 0 chr2 5291563 5291590 -245396264 + (TA)n Simple_repeat Simple_repeat 2 28 0 387 54 0 18 chr2 5291721 5291777 -245396077 - MLT2A2 LTR ERVL 0 453 399 249 650 0 13 chr2 5291777 5291934 -245395920 + (TA)n Simple_repeat Simple_repeat 2 156 0 326 58 19 19 chr2 5291963 5292015 -245395839 - MLT2A2 LTR ERVL -2 451 400 298 20 82 20 chr2 5292001 5292050 -245395804 + MLT2A1 LTR ERVL 393 444 0 * 417 278 82 64 chr2 5292249 5292893 -245394961 + L1MEd LINE L1 594 1249 -4870 934 271 41 39 chr2 5293109 5293544 -245394310 + L1ME1 LINE L1 5571 6006 -160 456 271 25 88 chr2 5293537 5293777 -245394077 + L1ME1 LINE L1 5895 6119 -47 * 1710 194 108 14 chr2 5293917 5294335 -245393519 - MSTB2 LTR MaLR 0 457 1 29 0 0 0 chr2 5294383 5294412 -245393442 + AT_rich Low_complexity Low_complexity 1 29 0 1567 207 78 58 chr2 5294506 5294671 -245393183 - L1M1 LINE L1 -738 5428 5268 261 0 0 0 chr2 5294671 5294700 -245393154 + (TG)n Simple_repeat Simple_repeat 2 30 0 189 0 0 0 chr2 5294699 5294720 -245393134 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 1567 207 78 58 chr2 5294700 5294720 -245393134 - L1M1 LINE L1 -898 5268 5250 1954 147 0 28 chr2 5294720 5295040 -245392814 - AluSx SINE Alu -1 311 1 1567 207 78 58 chr2 5295040 5295685 -245392169 - L1M1 LINE L1 -916 5250 4639 1027 307 19 5 chr2 5295686 5296057 -245391797 - L1MEc LINE L1 -5713 683 308 2579 87 8 46 chr2 5296271 5296661 -245391193 - THE1C LTR MaLR 0 375 1 214 300 14 14 chr2 5296679 5296749 -245391105 + GA-rich Low_complexity Low_complexity 2 71 0 350 226 0 36 chr2 5297314 5297398 -245390456 - MIR SINE MIR 0 262 182 5395 129 4 0 chr2 5297452 5297801 -245390053 - L1PB1 LINE L1 -3 6148 5802 261 0 0 0 chr2 5297801 5297830 -245390024 + (TA)n Simple_repeat Simple_repeat 1 29 0 5395 129 4 0 chr2 5297830 5298716 -245389138 - L1PB1 LINE L1 -349 5802 4898 245 269 76 50 chr2 5299105 5299224 -245388630 - MLT1K LTR MaLR -60 528 407 931 153 71 6 chr2 5299307 5299477 -245388377 - MLT1A1 LTR MaLR 0 365 185 206 203 0 17 chr2 5299851 5299910 -245387944 + CT-rich Low_complexity Low_complexity 1 58 0 33 0 0 0 chr2 5299964 5299997 -245387857 + AT_rich Low_complexity Low_complexity 1 33 0 1663 115 70 0 chr2 5301216 5301503 -245386351 - L1MA8 LINE L1 -5 6286 5980 231 133 0 0 chr2 5301540 5301585 -245386269 + (TG)n Simple_repeat Simple_repeat 2 46 0 390 308 84 42 chr2 5302301 5302658 -245385196 - L1ME4a LINE L1 -2 6119 5748 1446 201 35 6 chr2 5302817 5303160 -245384694 - L1MA8 LINE L1 -1 6290 5938 624 191 43 0 chr2 5303161 5303276 -245384578 - FLAM_C SINE Alu -10 133 14 2265 97 3 7 chr2 5303448 5303747 -245384107 - AluY SINE Alu -13 298 1 274 338 120 15 chr2 5303834 5303967 -245383887 + MIR SINE MIR 49 195 -67 226 309 59 0 chr2 5304005 5304073 -245383781 - MIR SINE MIR -101 161 90 233 293 53 67 chr2 5304669 5304819 -245383035 + L2 LINE L2 3111 3258 -55 295 282 113 81 chr2 5304943 5305191 -245382663 + MIR SINE MIR 1 256 -6 317 281 45 19 chr2 5305286 5305420 -245382434 + MLT1J2 LTR MaLR 6 142 -304 457 266 24 16 chr2 5305425 5305549 -245382305 - MER94 DNA DNA -9 125 1 366 239 84 42 chr2 5305671 5305813 -245382041 + MLT1J2 LTR MaLR 284 431 -19 21 0 0 0 chr2 5305979 5306000 -245381854 + AT_rich Low_complexity Low_complexity 1 21 0 1748 194 39 19 chr2 5306726 5307184 -245380670 + MLT2B1 LTR ERVL 1 513 -2 2029 116 39 0 chr2 5308506 5308790 -245379064 - AluSq SINE Alu -18 295 1 183 129 0 0 chr2 5308937 5308968 -245378886 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 783 196 21 11 chr2 5308973 5309162 -245378692 - L1MA3 LINE L1 -1 6304 6114 1117 40 34 17 chr2 5309296 5309320 -245378534 + (GAAA)n Simple_repeat Simple_repeat 1 202 0 1117 40 34 17 chr2 5309320 5309495 -245378359 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 2367 196 41 53 chr2 5310237 5310629 -245377225 - L1MC3 LINE L1 0 7785 7390 297 0 0 0 chr2 5310629 5310662 -245377192 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 4913 45 0 0 chr2 5310672 5311268 -245376586 - L1PA5 LINE L1 -3 6151 5556 2367 196 41 53 chr2 5311268 5311470 -245376384 - L1MC3 LINE L1 -404 7381 7187 2960 257 65 47 chr2 5311537 5313948 -245373906 - L1M4c LINE L1 -2427 3955 1442 193 252 30 8 chr2 5313983 5314114 -245373740 + (TA)n Simple_repeat Simple_repeat 1 134 0 1563 236 48 21 chr2 5314123 5314501 -245373353 - L1M3c LINE L1 -4516 1955 1457 2459 73 3 0 chr2 5314501 5314804 -245373050 - AluY SINE Alu -7 304 1 1563 236 48 21 chr2 5314804 5315006 -245372848 - L1M3c LINE L1 -5014 1457 1262 343 274 32 48 chr2 5315060 5315184 -245372670 - L1M4 LINE L1 -993 5153 5032 773 150 101 97 chr2 5315249 5315291 -245372563 - MSTA LTR MaLR 0 428 388 2089 141 21 26 chr2 5315291 5315668 -245372186 + THE1C LTR MaLR 1 375 0 773 150 101 97 chr2 5315668 5315832 -245372022 - MSTA LTR MaLR -40 388 221 1936 150 6 0 chr2 5315945 5316259 -245371595 - THE1C-int LTR MaLR -47 1604 1289 440 214 94 0 chr2 5316259 5316376 -245371478 - THE1C-int LTR MaLR -1523 128 1 1072 187 75 85 chr2 5316376 5316751 -245371103 - THE1C LTR MaLR 0 375 5 21 71 0 0 chr2 5316948 5316990 -245370864 + AT_rich Low_complexity Low_complexity 1 42 0 361 318 78 7 chr2 5320081 5320235 -245367619 - MIR SINE MIR -11 251 87 226 316 22 81 chr2 5322357 5322493 -245365361 - MIR SINE MIR -116 146 19 405 281 125 66 chr2 5322994 5323403 -245364451 - MLT1H LTR MaLR -2 547 115 229 235 37 26 chr2 5324124 5324264 -245363590 - L2 LINE L2 -3 3310 3116 367 257 62 49 chr2 5324363 5324507 -245363347 + MIR SINE MIR 61 206 -56 468 0 0 0 chr2 5324561 5324613 -245363241 + (TG)n Simple_repeat Simple_repeat 2 53 0 189 159 0 114 chr2 5325711 5325755 -245362099 - L2 LINE L2 -11 3261 3223 254 319 21 14 chr2 5325778 5325919 -245361935 - L1MA9 LINE L1 -38 6274 6133 1840 135 46 0 chr2 5327885 5328195 -245359659 - AluSx SINE Alu 0 312 1 933 127 8 0 chr2 5328379 5328513 -245359341 + AluSg/x SINE Alu 164 298 -14 1061 174 15 0 chr2 5328862 5329057 -245358797 + L1PB1 LINE L1 3 200 -6663 * 4014 117 16 12 chr2 5329049 5330208 -245357646 + L1PB1 LINE L1 625 1937 -4926 1413 216 63 23 chr2 5330341 5330689 -245357165 + LTR10A LTR ERV1 181 542 -67 7830 207 40 45 chr2 5330705 5332761 -245355093 + L1PB1 LINE L1 1932 3997 -2870 1720 77 0 14 chr2 5332761 5332981 -245354873 - AluY SINE Alu -15 296 80 7830 207 40 45 chr2 5332981 5333467 -245354387 + L1PB1 LINE L1 3997 4484 -2383 2233 102 0 7 chr2 5333467 5333762 -245354092 + AluSc SINE Alu 1 293 -16 7830 207 40 45 chr2 5333762 5335970 -245351884 + L1PB1 LINE L1 4484 6652 -215 247 284 75 0 chr2 5336269 5336336 -245351518 + L2 LINE L2 3200 3271 -1 2371 226 32 12 chr2 5336523 5336980 -245350874 + L1MA9 LINE L1 5701 6173 -139 198 71 0 0 chr2 5336980 5337008 -245350846 + (CA)n Simple_repeat Simple_repeat 1 28 0 2371 226 32 12 chr2 5337008 5337112 -245350742 + L1MA9 LINE L1 6173 6273 -39 221 365 25 45 chr2 5337830 5338030 -245349824 - MIR SINE MIR -14 248 53 2010 57 0 4 chr2 5339453 5339698 -245348156 - AluY SINE Alu -67 244 1 705 213 37 84 chr2 5339984 5340521 -245347333 - L1MC4 LINE L1 -6 8036 7373 219 267 33 0 chr2 5340757 5340817 -245347037 + L2 LINE L2 3230 3291 -22 385 355 48 35 chr2 5340909 5341140 -245346714 + L2 LINE L2 2851 3084 -188 2173 95 3 0 chr2 5343590 5343909 -245343945 + AluSx SINE Alu 1 320 0 1344 226 30 39 chr2 5345303 5345728 -245342126 + L1MC4 LINE L1 7634 8042 0 183 248 69 79 chr2 5348547 5348648 -245339206 - L3 LINE CR1 -641 936 837 249 274 108 49 chr2 5349903 5350005 -245337849 + MIR SINE MIR 26 133 -75 1610 78 10 5 chr2 5352027 5352259 -245335595 - AluSg/x SINE Alu 0 308 76 240 247 0 0 chr2 5352934 5353019 -245334835 + GA-rich Low_complexity Low_complexity 2 86 0 22 0 0 0 chr2 5353137 5353159 -245334695 + AT_rich Low_complexity Low_complexity 1 22 0 610 287 56 15 chr2 5353926 5354121 -245333733 + MLT1A2 LTR MaLR 1 203 -171 757 229 24 7 chr2 5354147 5354369 -245333485 + MLT1A2 LTR MaLR 154 372 -2 23 0 0 0 chr2 5354702 5354725 -245333129 + AT_rich Low_complexity Low_complexity 1 23 0 311 270 61 86 chr2 5354794 5354957 -245332897 - MIR SINE MIR -70 192 34 206 252 19 68 chr2 5357536 5357639 -245330215 + MIR SINE MIR 114 211 -51 203 269 58 0 chr2 5357909 5357961 -245329893 - MIR SINE MIR -60 148 94 309 285 199 8 chr2 5360575 5360731 -245327123 + MIR3 SINE MIR 2 192 -16 266 288 196 18 chr2 5360735 5360898 -245326956 + MIR SINE MIR 5 196 -66 846 156 7 0 chr2 5361787 5361928 -245325926 - L1MA8 LINE L1 -5 6286 6145 241 222 19 0 chr2 5362317 5362371 -245325483 + (TAA)n Simple_repeat Simple_repeat 1 55 0 259 274 0 0 chr2 5362457 5362519 -245325335 + MIR SINE MIR 184 245 -17 607 322 0 14 chr2 5362607 5362818 -245325036 - MIR SINE MIR -10 252 45 2232 190 21 73 chr2 5362820 5363668 -245324186 + L1MA9 LINE L1 4813 5630 -682 3944 128 67 38 chr2 5363784 5364474 -245323380 + L1MA9 LINE L1 5603 6312 0 398 364 57 43 chr2 5365502 5365942 -245321912 - L3 LINE CR1 -910 667 222 212 75 0 50 chr2 5366839 5366879 -245320975 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 228 389 0 0 chr2 5369645 5369758 -245318096 + MER58 DNA MER1_type 169 281 -2139 * 293 265 0 0 chr2 5369750 5369818 -245318036 + MER58 DNA MER1_type 2353 2420 0 9526 183 26 2 chr2 5370166 5372721 -245315133 - L1PA13 LINE L1 0 7601 5016 1383 206 0 0 chr2 5372722 5373004 -245314850 - L1P LINE L1 -932 5214 4933 * 8941 238 31 37 chr2 5372994 5378559 -245309295 - L1PA13 LINE L1 -2586 4998 10 2288 90 0 34 chr2 5379006 5379328 -245308526 - AluY SINE Alu 0 311 1 285 328 34 62 chr2 5379723 5379900 -245307954 - HAL1 LINE L1 -2300 207 36 2805 115 0 6 chr2 5379910 5380276 -245307578 - THE1B LTR MaLR 0 364 1 209 308 96 48 chr2 5380611 5380715 -245307139 + MIR SINE MIR 39 147 -61 353 206 16 0 chr2 5381191 5381254 -245306600 + L1MC4 LINE L1 6832 6895 -1147 267 374 32 0 chr2 5381321 5381444 -245306410 + MIR SINE MIR 59 185 -77 180 0 0 0 chr2 5382571 5382591 -245305263 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 358 336 141 0 chr2 5383377 5383526 -245304328 - MIR SINE MIR -13 249 80 209 174 0 43 chr2 5384451 5384497 -245303357 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr2 5384604 5384627 -245303227 + AT_rich Low_complexity Low_complexity 1 23 0 250 391 65 0 chr2 5385288 5385426 -245302428 + L2 LINE L2 3123 3269 -3 765 330 19 4 chr2 5385614 5385872 -245301982 - MIR SINE MIR 0 262 1 253 305 52 45 chr2 5386264 5386418 -245301436 + MIR SINE MIR 66 220 -42 297 250 78 43 chr2 5387174 5387290 -245300564 + MIR3 SINE MIR 35 154 -54 33 56 0 0 chr2 5387560 5387614 -245300240 + AT_rich Low_complexity Low_complexity 1 54 0 228 279 65 58 chr2 5387745 5387899 -245299955 - MER104 DNA Tc2 -1 179 25 755 221 77 10 chr2 5389836 5390031 -245297823 - MER20 DNA MER1_type 0 219 12 185 300 43 0 chr2 5390089 5390159 -245297695 - MIR3 SINE MIR -7 201 129 211 348 63 25 chr2 5390194 5390352 -245297502 + L2 LINE L2 2679 2842 -472 229 367 0 20 chr2 5390458 5390556 -245297298 + L2 LINE L2 3162 3257 -56 2164 172 27 12 chr2 5391279 5391692 -245296162 - MSTB1 LTR MaLR -13 419 1 317 303 0 45 chr2 5391878 5392033 -245295821 + LTR16A1 LTR ERVL 300 447 -10 611 226 40 40 chr2 5392108 5392135 -245295719 - MER45A DNA AcHobo -1403 178 152 1686 179 82 9 chr2 5392135 5392475 -245295379 - MLT1A1 LTR MaLR 0 365 1 611 226 40 40 chr2 5392475 5392624 -245295230 - MER45A DNA AcHobo -1428 153 2 216 302 0 0 chr2 5392869 5392922 -245294932 + L2 LINE L2 3218 3270 -2 604 216 275 0 chr2 5394116 5394352 -245293502 - MLT1F1 LTR MaLR -2 540 240 286 229 16 0 chr2 5394385 5394507 -245293347 + GA-rich Low_complexity Low_complexity 1 124 0 617 175 104 27 chr2 5394536 5394719 -245293135 - MLT1F1 LTR MaLR -370 197 1 21 0 0 0 chr2 5396851 5396872 -245290982 + AT_rich Low_complexity Low_complexity 1 21 0 1643 204 45 60 chr2 5397382 5397852 -245290002 - MLT1C LTR MaLR -1 466 4 632 339 39 9 chr2 5398515 5398745 -245289109 - MIR SINE MIR -4 258 22 1905 104 20 30 chr2 5398745 5399042 -245288812 - AluSq SINE Alu -15 298 5 2141 89 3 78 chr2 5399286 5399669 -245288185 + MER4A LTR ERV1 1 354 -310 476 210 178 19 chr2 5399720 5399877 -245287977 + MER4C LTR ERV1 284 465 0 233 267 227 39 chr2 5399914 5400297 -245287557 - L2 LINE L2 -170 3143 2619 2305 119 117 8 chr2 5400297 5400683 -245287171 - MSTA LTR MaLR 0 428 1 233 267 227 39 chr2 5400683 5400741 -245287113 - L2 LINE L2 -694 2619 2573 608 286 0 19 chr2 5401301 5401462 -245286392 - MIR SINE MIR 0 262 105 475 287 90 27 chr2 5402439 5402662 -245285192 - L2 LINE L2 -3 3310 3074 239 122 122 0 chr2 5402672 5402721 -245285133 - MLT2B3 LTR ERVL 0 453 399 200 108 0 75 chr2 5402725 5402818 -245285036 + (TA)n Simple_repeat Simple_repeat 2 87 0 1812 215 23 64 chr2 5402822 5403363 -245284491 - MLT2B3 LTR ERVL -44 508 1 507 349 20 49 chr2 5403398 5403757 -245284097 - L2 LINE L2 -308 3005 2658 445 210 21 59 chr2 5403955 5404141 -245283713 + L1MB7 LINE L1 2025 2203 -4181 1557 179 58 14 chr2 5404148 5404439 -245283415 + AluJo SINE Alu 1 304 -8 550 86 32 0 chr2 5404450 5404543 -245283311 + GA-rich Low_complexity Low_complexity 1 96 0 373 245 211 0 chr2 5404654 5404963 -245282891 + L1MB7 LINE L1 3125 3507 -2875 311 200 31 0 chr2 5405077 5405142 -245282712 + L1MC4 LINE L1 6637 6703 -1339 192 234 0 0 chr2 5405143 5405190 -245282664 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 347 250 0 22 chr2 5405190 5405282 -245282572 + L1MC4 LINE L1 6614 6703 -1339 246 32 0 0 chr2 5405288 5405319 -245282535 + (GA)n Simple_repeat Simple_repeat 2 32 0 1061 127 20 0 chr2 5405320 5405470 -245282384 - AluSg/x SINE Alu -39 273 121 4260 246 67 19 chr2 5405474 5406474 -245281380 + L1MB7 LINE L1 3789 4900 -1482 1911 126 4 11 chr2 5406474 5406765 -245281089 - AluSx SINE Alu 0 303 15 4260 246 67 19 chr2 5406765 5407405 -245280449 + L1MB7 LINE L1 4900 5508 -874 201 208 21 0 chr2 5407405 5407453 -245280401 + (TA)n Simple_repeat Simple_repeat 1 49 0 2028 210 52 43 chr2 5407526 5408160 -245279694 + L1MB7 LINE L1 5714 6353 -67 1192 253 51 16 chr2 5408255 5408627 -245279227 - MLT1E3 LTR MaLR -93 531 147 1812 62 8 4 chr2 5410164 5410405 -245277449 + L1PA6 LINE L1 5913 6154 0 360 293 69 26 chr2 5412354 5412470 -245275384 + MIR SINE MIR 19 139 -69 183 80 0 0 chr2 5413348 5413373 -245274481 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1680 94 11 26 chr2 5414441 5414708 -245273146 + L1PA11 LINE L1 5891 6153 -21 1396 227 32 0 chr2 5414728 5415041 -245272813 - MLT1A1 LTR MaLR -42 323 1 1837 179 144 2 chr2 5415620 5416029 -245271825 + MLT1C LTR MaLR 1 467 0 256 330 134 18 chr2 5416608 5416832 -245271022 + MIR SINE MIR 12 261 -1 1823 137 23 0 chr2 5417906 5418205 -245269649 - THE1B LTR MaLR -5 359 54 244 197 30 15 chr2 5418385 5418451 -245269403 + L1PB1 LINE L1 5284 5350 -804 4295 111 16 17 chr2 5418564 5419255 -245268599 + L1PB1 LINE L1 5462 6151 0 558 284 95 46 chr2 5419312 5419639 -245268215 - HAL1b LINE L1 -393 955 613 312 302 28 9 chr2 5419653 5419759 -245268095 - HAL1b LINE L1 -797 551 444 21 71 0 0 chr2 5419820 5419862 -245267992 + AT_rich Low_complexity Low_complexity 1 42 0 509 262 16 49 chr2 5419879 5420123 -245267731 - HAL1b LINE L1 -768 580 345 253 262 0 0 chr2 5420124 5420185 -245267669 + CT-rich Low_complexity Low_complexity 2 62 0 21 36 0 0 chr2 5420285 5420313 -245267541 + AT_rich Low_complexity Low_complexity 1 28 0 469 312 67 19 chr2 5420781 5421107 -245266747 - L1MC/D LINE L1 -748 5398 5118 217 224 0 17 chr2 5421286 5421344 -245266510 + CT-rich Low_complexity Low_complexity 2 58 0 * 264 202 60 0 chr2 5421339 5421423 -245266431 + (TA)n Simple_repeat Simple_repeat 2 90 0 204 263 0 0 chr2 5421554 5421630 -245266224 + (TA)n Simple_repeat Simple_repeat 2 77 0 9615 156 48 10 chr2 5421632 5423425 -245264429 + Tigger2 DNA MER2_type 854 2715 -3 249 167 302 0 chr2 5524556 5524652 -245163202 - L1ME3A LINE L1 0 6170 6046 435 19 0 0 chr2 5524743 5524795 -245163059 + (TG)n Simple_repeat Simple_repeat 2 53 0 247 229 73 9 chr2 5524987 5525096 -245162758 - L1MC/D LINE L1 -1932 4214 4099 2871 232 41 24 chr2 5525105 5526638 -245161216 + L1MB7 LINE L1 4623 6179 -5 382 125 42 0 chr2 5526638 5526710 -245161144 + AluS SINE Alu 1 75 -228 854 188 0 6 chr2 5527505 5527686 -245160168 + (CA)n Simple_repeat Simple_repeat 1 180 0 298 259 54 60 chr2 5529016 5529182 -245158672 - LTR50 LTR ERVL -615 180 16 197 315 96 55 chr2 5529510 5529656 -245158198 - L2 LINE L2 -48 3224 3073 234 81 0 0 chr2 5529738 5529775 -245158079 + (T)n Simple_repeat Simple_repeat 1 37 0 190 328 118 0 chr2 5530196 5530315 -245157539 - MIR3 SINE MIR -43 165 33 2353 103 3 0 chr2 5530937 5531249 -245156605 - AluSq SINE Alu 0 313 1 317 321 128 66 chr2 5531540 5531963 -245155891 + L2 LINE L2 2811 3259 -13 239 191 0 29 chr2 5533785 5533793 -245154061 + (TA)n Simple_repeat Simple_repeat 1 8 -58 2341 149 20 43 chr2 5533793 5534236 -245153618 - Tigger2a DNA MER2_type 0 434 2 239 191 0 29 chr2 5534236 5534282 -245153572 + (TA)n Simple_repeat Simple_repeat 8 55 -11 1668 186 54 9 chr2 5534282 5534615 -245153239 + MER7A DNA MER2_type 1 346 0 239 191 0 29 chr2 5534615 5534627 -245153227 + (TA)n Simple_repeat Simple_repeat 55 66 0 341 253 51 34 chr2 5535317 5535523 -245152331 + L1M4 LINE L1 5218 5426 -744 10900 154 25 11 chr2 5535652 5537658 -245150196 + Tigger1 DNA MER2_type 1 2034 -384 320 102 0 0 chr2 5537743 5537792 -245150062 + Tigger1 DNA MER2_type 2044 2092 -326 441 78 62 0 chr2 5537793 5537857 -245149997 + Alu SINE Alu 222 289 -21 1659 178 34 0 chr2 5537859 5538185 -245149669 + Tigger1 DNA MER2_type 2080 2416 -2 896 235 49 57 chr2 5538513 5539044 -245148810 - L1PBb LINE L1 -4800 1403 781 26 0 0 0 chr2 5540120 5540146 -245147708 + AT_rich Low_complexity Low_complexity 1 26 0 741 167 52 52 chr2 5540700 5540874 -245146980 + MER58A DNA MER1_type 32 205 -19 219 273 80 87 chr2 5541348 5541498 -245146356 - MER5A DNA MER1_type -40 149 1 299 246 56 47 chr2 5543701 5543856 -245143998 + MIR SINE MIR 2 151 -57 2262 117 0 3 chr2 5544999 5545308 -245142546 + AluSc SINE Alu 1 308 -1 2465 55 0 13 chr2 5546273 5546585 -245141269 - AluY SINE Alu -3 308 1 345 135 58 19 chr2 5547069 5547173 -245140681 - Looper DNA T2_type -78 1480 1373 221 30 61 0 chr2 5547173 5547206 -245140648 + T-rich Low_complexity Low_complexity 1 35 0 2625 98 0 10 chr2 5547212 5547601 -245140253 - L1PA8A LINE L1 -28 6103 5719 * 3231 108 15 5 chr2 5547597 5548466 -245139388 + L1PA8A LINE L1 4848 5726 -405 297 0 0 0 chr2 5548466 5548499 -245139355 + (CA)n Simple_repeat Simple_repeat 2 34 0 3231 108 15 5 chr2 5548499 5548517 -245139337 + L1PA8A LINE L1 5726 5742 -389 1174 164 10 0 chr2 5548598 5548806 -245139048 - MER2 DNA MER2_type -134 211 2 631 266 77 10 chr2 5548828 5549125 -245138729 - Looper DNA T2_type -1241 317 1 516 248 51 0 chr2 5550207 5550344 -245137510 + HAL1 LINE L1 51 194 -2313 418 314 63 20 chr2 5550352 5550747 -245137107 + HAL1 LINE L1 1051 1462 -1045 813 270 46 42 chr2 5550867 5551344 -245136510 + HAL1 LINE L1 1902 2380 -127 2292 109 3 0 chr2 5551940 5552252 -245135602 - AluSp SINE Alu 0 313 1 39 50 0 0 chr2 5553269 5553329 -245134525 + AT_rich Low_complexity Low_complexity 1 60 0 23 68 0 0 chr2 5553411 5553455 -245134399 + AT_rich Low_complexity Low_complexity 1 44 0 598 222 6 35 chr2 5553518 5553711 -245134143 - L1 LINE L1 -2369 3777 3590 302 280 16 40 chr2 5554586 5554711 -245133143 - L1ME3A LINE L1 -3 6167 6046 2002 163 7 0 chr2 5554901 5555207 -245132647 - AluSx SINE Alu -4 308 1 4422 154 54 71 chr2 5555568 5556657 -245131197 + MER11C LTR ERVK 1 1071 0 1278 200 71 26 chr2 5557040 5557417 -245130437 - L1MC2 LINE L1 -2 7772 6148 1115 134 41 0 chr2 5557421 5557592 -245130262 - AluSg/x SINE Alu -1 311 134 2256 110 3 0 chr2 5557592 5557884 -245129970 - AluSp SINE Alu -15 298 6 3627 181 63 94 chr2 5557884 5559019 -245128835 - L1MC3 LINE L1 -380 7405 6306 256 325 144 8 chr2 5559319 5559454 -245128400 + MIR SINE MIR 11 159 -57 1520 178 90 26 chr2 5559469 5559812 -245128042 - MLT1A1 LTR MaLR 0 365 1 183 205 0 0 chr2 5561232 5561271 -245126583 + T-rich Low_complexity Low_complexity 1 39 0 854 190 13 0 chr2 5561716 5561874 -245125980 + FRAM SINE Alu 1 160 -6 219 241 35 58 chr2 5562029 5562116 -245125738 + MIR SINE MIR 56 140 -122 235 334 99 60 chr2 5562284 5562637 -245125217 - L2 LINE L2 0 3272 2906 27 29 0 0 chr2 5562922 5562956 -245124898 + AT_rich Low_complexity Low_complexity 1 34 0 251 270 11 45 chr2 5563495 5563673 -245124181 + (CTTAT)n Simple_repeat Simple_repeat 5 176 0 1273 208 0 4 chr2 5564031 5564303 -245123551 + AluJb SINE Alu 42 312 0 735 282 53 18 chr2 5564956 5565183 -245122671 + MIR SINE MIR 15 249 -13 234 305 184 29 chr2 5566085 5566259 -245121595 - MIR SINE MIR -61 201 1 1202 248 103 7 chr2 5567072 5567488 -245120366 - MLT1C LTR MaLR -6 461 6 189 0 0 0 chr2 5567635 5567656 -245120198 + (TGG)n Simple_repeat Simple_repeat 1 21 0 216 111 0 0 chr2 5567671 5567707 -245120147 + (TG)n Simple_repeat Simple_repeat 1 36 0 199 354 101 69 chr2 5568303 5568769 -245119085 + L2 LINE L2 417 897 -2417 484 139 0 0 chr2 5569041 5569113 -245118741 - AluS SINE Alu -13 297 226 29 28 0 0 chr2 5569302 5569338 -245118516 + AT_rich Low_complexity Low_complexity 1 36 0 269 186 14 0 chr2 5569441 5569511 -245118343 + (TATG)n Simple_repeat Simple_repeat 2 72 0 186 269 60 45 chr2 5570275 5570342 -245117512 - L2 LINE L2 0 3313 3246 237 139 0 0 chr2 5570589 5570632 -245117222 + (TA)n Simple_repeat Simple_repeat 2 44 0 225 218 23 23 chr2 5570635 5570722 -245117132 + L1MC4 LINE L1 6614 6700 -1342 310 256 49 0 chr2 5570726 5570808 -245117046 - L1MC4 LINE L1 -1340 6702 6617 307 262 71 0 chr2 5570759 5570843 -245117011 + L1MC4 LINE L1 6614 6703 -1339 * 497 297 95 54 chr2 5571133 5571692 -245116162 - L2 LINE L2 -13 3300 2702 1105 107 0 47 chr2 5571701 5571870 -245115984 - AluSg SINE Alu -30 282 122 201 74 0 0 chr2 5571873 5571900 -245115954 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1033 92 0 0 chr2 5571902 5572033 -245115821 - AluSg SINE Alu -179 131 1 1181 285 203 65 chr2 5572033 5573637 -245114217 - L2 LINE L2 -599 2715 891 881 289 90 18 chr2 5574619 5575120 -245112734 + L1MCc LINE L1 861 1397 -5026 532 300 73 45 chr2 5575124 5575618 -245112236 + L1MCc LINE L1 1406 1913 -5028 231 282 35 0 chr2 5575667 5575841 -245112013 + L1MCc LINE L1 2814 2993 -4129 336 117 36 108 chr2 5575900 5576011 -245111843 - L1MA9 LINE L1 -2 6310 6208 * 871 160 46 16 chr2 5576007 5576154 -245111700 + L1MA9 LINE L1 5632 5788 -524 204 40 0 0 chr2 5576154 5576179 -245111675 + (TG)n Simple_repeat Simple_repeat 2 26 0 871 160 46 16 chr2 5576179 5576225 -245111629 + L1MA9 LINE L1 5788 5831 -481 757 152 25 7 chr2 5576227 5576390 -245111464 + L1MA9 LINE L1 5775 5946 -243 3670 197 92 42 chr2 5576519 5576794 -245111060 + L1MC3 LINE L1 6591 6851 -934 189 0 0 0 chr2 5576794 5576815 -245111039 + (CA)n Simple_repeat Simple_repeat 1 21 0 3670 197 92 42 chr2 5576815 5576836 -245111018 + L1MC3 LINE L1 6851 6869 -916 3169 148 25 17 chr2 5576836 5577358 -245110496 + MER1A DNA MER1_type 2 527 0 3670 197 92 42 chr2 5577358 5578198 -245109656 + L1MC3 LINE L1 6869 7785 0 1667 260 59 47 chr2 5578217 5579261 -245108593 + L1MCc LINE L1 3167 4223 -2718 316 360 39 39 chr2 5579989 5580247 -245107607 + L2 LINE L2 2826 3083 -189 2488 64 0 0 chr2 5580551 5580849 -245107005 - AluY SINE Alu -13 298 1 25 0 0 0 chr2 5580949 5580974 -245106880 + AT_rich Low_complexity Low_complexity 1 25 0 810 330 216 19 chr2 5581020 5581315 -245106539 + L2 LINE L2 555 791 -2523 541 195 81 0 chr2 5581315 5581438 -245106416 - FLAM_A SINE Alu 0 133 1 810 330 216 19 chr2 5581438 5582590 -245105264 + L2 LINE L2 791 2287 -1027 392 335 90 75 chr2 5582817 5583273 -245104581 + L2 LINE L2 2851 3313 0 193 200 30 140 chr2 5583446 5583546 -245104308 - L2 LINE L2 -190 3082 2994 260 235 20 10 chr2 5583739 5583781 -245104073 + (TA)n Simple_repeat Simple_repeat 2 42 -58 2244 116 0 3 chr2 5583781 5584091 -245103763 + AluSg SINE Alu 1 309 -1 260 235 20 10 chr2 5584091 5584146 -245103708 + (TA)n Simple_repeat Simple_repeat 42 100 0 329 336 50 0 chr2 5585067 5585186 -245102668 - MIR3 SINE MIR -35 173 49 267 327 65 42 chr2 5585441 5585609 -245102245 + MER5A DNA MER1_type 17 188 -1 2253 104 3 0 chr2 5585811 5586108 -245101746 - AluSx SINE Alu -14 298 1 21 36 0 0 chr2 5586171 5586199 -245101655 + AT_rich Low_complexity Low_complexity 1 28 0 677 186 30 9 chr2 5587200 5587538 -245100316 + CT-rich Low_complexity Low_complexity 1 345 0 342 224 14 46 chr2 5587555 5587910 -245099944 + CT-rich Low_complexity Low_complexity 1 343 0 2288 109 3 0 chr2 5588664 5588976 -245098878 + AluSp SINE Alu 1 313 0 500 160 15 15 chr2 5590295 5590426 -245097428 + GA-rich Low_complexity Low_complexity 1 131 0 317 319 17 9 chr2 5590520 5590636 -245097218 + MIR3 SINE MIR 74 190 -18 967 263 134 26 chr2 5591184 5591534 -245096320 + MLT1B LTR MaLR 3 390 0 1545 123 53 53 chr2 5592587 5592905 -245094949 - THE1C LTR MaLR -57 318 1 28 29 0 0 chr2 5592945 5592980 -245094874 + AT_rich Low_complexity Low_complexity 1 35 0 197 139 23 0 chr2 5592980 5593023 -245094831 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 199 339 80 9 chr2 5594316 5594428 -245093426 + MIR SINE MIR 21 140 -68 190 356 67 34 chr2 5594585 5594734 -245093120 - MIR SINE MIR -95 167 14 242 330 11 0 chr2 5595326 5595417 -245092437 + MLT1I LTR MaLR 72 163 -246 217 280 60 40 chr2 5596482 5596582 -245091272 + MIR SINE MIR 20 121 -141 249 361 69 0 chr2 5596643 5596773 -245091081 - L2 LINE L2 0 3313 3175 238 261 0 0 chr2 5596785 5596831 -245091023 + L2 LINE L2 3209 3254 -18 223 221 174 0 chr2 5597254 5597340 -245090514 - MIR SINE MIR -71 191 91 288 324 15 7 chr2 5597391 5597527 -245090327 - LTR67 LTR ERVL -27 530 394 285 278 11 33 chr2 5599042 5599132 -245088722 + L2 LINE L2 3220 3307 -6 367 308 159 0 chr2 5599799 5599994 -245087860 - MIR SINE MIR -26 236 11 194 316 71 10 chr2 5600890 5600988 -245086866 - MIR SINE MIR -55 153 50 238 344 0 0 chr2 5601202 5601266 -245086588 + MIR SINE MIR 83 146 -62 1565 182 100 9 chr2 5601274 5601603 -245086251 - MLT1A1 LTR MaLR -6 359 1 1185 219 149 10 chr2 5601639 5601940 -245085914 - MER2 DNA MER2_type -1 343 1 21 0 0 0 chr2 5603313 5603334 -245084520 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 5603350 5603444 -245084410 + MER3 DNA MER1_type 1 96 -113 1525 246 47 30 chr2 5603450 5603917 -245083937 + L1MA9 LINE L1 5798 6272 -40 300 240 52 10 chr2 5603925 5604021 -245083833 + MER3 DNA MER1_type 99 198 -11 3624 152 0 26 chr2 5604154 5604695 -245083159 + MER1A DNA MER1_type 1 527 0 234 318 106 20 chr2 5604720 5604965 -245082889 + HAL1b LINE L1 306 571 -777 231 226 70 26 chr2 5605027 5605142 -245082712 + HAL1b LINE L1 678 797 -551 30 59 0 0 chr2 5605455 5605506 -245082348 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr2 5605513 5605550 -245082304 + AT_rich Low_complexity Low_complexity 1 37 0 1732 133 42 52 chr2 5606256 5606565 -245081289 + AluSx SINE Alu 1 306 -6 1727 199 21 57 chr2 5606627 5606820 -245081034 + MLT1A2 LTR MaLR 1 175 -199 357 43 0 0 chr2 5606820 5606867 -245080987 + (TC)n Simple_repeat Simple_repeat 2 48 0 1727 199 21 57 chr2 5606867 5607061 -245080793 + MLT1A2 LTR MaLR 175 374 0 306 362 54 0 chr2 5607078 5607227 -245080627 + L1MC4a LINE L1 4736 4892 -1254 1144 312 62 18 chr2 5607621 5608278 -245079576 + L1MC4a LINE L1 5256 5941 -1867 24 32 0 0 chr2 5608470 5608501 -245079353 + AT_rich Low_complexity Low_complexity 1 31 0 229 359 26 0 chr2 5608779 5608857 -245078997 + MIR SINE MIR 2 81 -181 389 261 7 0 chr2 5609902 5610055 -245077799 + (TG)n Simple_repeat Simple_repeat 2 155 0 1828 125 53 11 chr2 5610244 5610525 -245077329 + AluSx SINE Alu 1 293 -19 225 0 0 0 chr2 5610608 5610633 -245077221 + (TC)n Simple_repeat Simple_repeat 2 26 0 184 306 83 9 chr2 5611043 5611151 -245076703 + MIR SINE MIR 23 138 -124 397 282 75 27 chr2 5611178 5611379 -245076475 - MIR SINE MIR -27 235 25 182 239 22 0 chr2 5611553 5611599 -245076255 - L3b LINE CR1 -9 1574 1528 375 343 66 24 chr2 5611924 5612137 -245075717 - MIR SINE MIR -32 230 9 528 122 8 98 chr2 5612335 5612458 -245075396 - L1PB2 LINE L1 -4 6147 6036 296 290 90 80 chr2 5612576 5612732 -245075122 - MIR SINE MIR -2 260 100 1344 202 10 50 chr2 5612732 5613073 -245074781 + AluJb SINE Alu 1 312 0 296 290 90 80 chr2 5613073 5613116 -245074738 - MIR SINE MIR -162 100 59 3822 157 11 5 chr2 5613350 5613962 -245073892 - L1PA15 LINE L1 -2 6163 5548 28 0 0 0 chr2 5614001 5614029 -245073825 + AT_rich Low_complexity Low_complexity 1 28 0 1852 145 78 31 chr2 5615364 5615722 -245072132 + THE1C LTR MaLR 1 375 0 8726 127 115 3 chr2 5615724 5617138 -245070716 + THE1C-int LTR MaLR 3 1575 -5 1772 152 45 73 chr2 5617147 5617529 -245070325 + THE1C LTR MaLR 5 375 0 311 328 101 0 chr2 5617913 5618032 -245069822 - L2 LINE L2 -7 3306 3176 1507 189 10 34 chr2 5618070 5618366 -245069488 - AluJo SINE Alu -23 289 1 500 240 0 0 chr2 5619689 5619789 -245068065 + MER63 DNA MER1_type 27 752 -84 335 241 25 0 chr2 5619790 5619869 -245067985 + MER63 DNA MER1_type 980 1060 -2 481 270 16 0 chr2 5620471 5620597 -245067257 - L3b LINE CR1 -331 1252 1125 217 344 56 38 chr2 5620787 5620834 -245067020 - MIR3 SINE MIR -7 201 156 2504 67 0 3 chr2 5620834 5621146 -245066708 + AluY SINE Alu 1 311 0 217 344 56 38 chr2 5621146 5621258 -245066596 - MIR3 SINE MIR -52 156 39 186 280 54 21 chr2 5621384 5621477 -245066377 + L2 LINE L2 3206 3301 -12 236 62 0 0 chr2 5623985 5624017 -245063837 + HSMAR1 DNA Mariner 3 34 -1253 2294 95 0 20 chr2 5624188 5624493 -245063361 - AluSg SINE Alu -7 303 5 219 88 0 0 chr2 5626007 5626041 -245061813 + (GA)n Simple_repeat Simple_repeat 1 34 0 586 299 88 75 chr2 5626138 5626580 -245061274 + MLT1J2 LTR MaLR 1 448 -2 520 288 73 10 chr2 5626737 5626942 -245060912 - MIR SINE MIR -37 225 8 757 148 26 9 chr2 5627343 5627458 -245060396 + FLAM_C SINE Alu 12 128 -15 205 364 156 0 chr2 5627921 5628075 -245059779 - MIR SINE MIR -12 250 73 303 313 56 17 chr2 5628541 5628720 -245059134 + MIR SINE MIR 54 239 -23 33 43 0 0 chr2 5630812 5630859 -245056995 + AT_rich Low_complexity Low_complexity 1 47 0 2651 149 2 7 chr2 5632382 5632789 -245055065 + MSTA LTR MaLR 1 405 -23 1486 121 36 9 chr2 5632789 5633013 -245054841 - MER30 DNA MER1_type 0 230 1 224 227 0 0 chr2 5633044 5633088 -245054766 + (CATA)n Simple_repeat Simple_repeat 1 44 0 302 298 36 79 chr2 5633979 5634071 -245053783 - L1M4 LINE L1 -3775 2371 2277 2308 104 7 0 chr2 5634071 5634369 -245053485 - AluSp SINE Alu -13 300 1 302 298 36 79 chr2 5634369 5634528 -245053326 - L1M4 LINE L1 -3869 2277 2131 287 164 16 0 chr2 5635021 5635082 -245052772 + (TA)n Simple_repeat Simple_repeat 1 62 0 203 369 8 8 chr2 5638685 5638807 -245049047 + (TG)n Simple_repeat Simple_repeat 1 122 0 302 347 52 6 chr2 5639164 5639337 -245048517 + MIR3 SINE MIR 5 185 -23 516 186 12 0 chr2 5640326 5640412 -245047442 - FLAM_C SINE Alu -36 107 21 344 204 54 21 chr2 5640531 5640624 -245047230 - Charlie7 DNA MER1_type -2455 157 62 2204 109 6 13 chr2 5640810 5640943 -245046911 + AluSg SINE Alu 1 133 -177 2151 104 0 13 chr2 5640943 5641278 -245046576 + AluSx SINE Alu 3 312 0 2204 109 6 13 chr2 5641278 5641455 -245046399 + AluSg SINE Alu 133 309 -1 3109 123 12 6 chr2 5641576 5642057 -245045797 - L1PA13 LINE L1 -415 5746 5263 2736 125 39 2 chr2 5642057 5642453 -245045401 + L1PA13 LINE L1 5739 6160 -3 467 236 51 97 chr2 5642518 5642713 -245045141 - MIR SINE MIR -10 252 67 358 309 86 6 chr2 5643338 5643513 -245044341 + MIR SINE MIR 49 237 -25 185 163 0 82 chr2 5643903 5643952 -245043902 - L3b LINE CR1 -13 1570 1526 1718 212 57 5 chr2 5644091 5644459 -245043395 + MLT1B LTR MaLR 3 389 -1 185 323 83 53 chr2 5645016 5645149 -245042705 + MIR SINE MIR 117 253 -9 511 278 88 32 chr2 5646611 5646827 -245041027 - MIR SINE MIR -21 241 14 205 313 101 10 chr2 5647123 5647222 -245040632 + MIR SINE MIR 40 147 -115 242 379 0 0 chr2 5647367 5647462 -245040392 + MLT1G1 LTR MaLR 431 525 -70 1288 198 62 35 chr2 5647463 5647574 -245040280 + AluJo SINE Alu 4 110 -202 2261 134 19 43 chr2 5647574 5647947 -245039907 - THE1B LTR MaLR 0 364 1 1288 198 62 35 chr2 5647947 5648123 -245039731 + AluJo SINE Alu 110 299 -13 2156 117 19 3 chr2 5648403 5648728 -245039126 - Tigger3b DNA MER2_type -564 667 338 233 87 0 0 chr2 5648743 5648789 -245039065 - LTR66 LTR ERVL -171 439 394 239 211 9 28 chr2 5648797 5648906 -245038948 + (TA)n Simple_repeat Simple_repeat 2 108 0 565 158 0 10 chr2 5648906 5649007 -245038847 - Tigger3b DNA MER2_type -902 329 230 3069 196 59 6 chr2 5649907 5650570 -245037284 - L1MC2 LINE L1 0 6344 5647 21 0 0 0 chr2 5650668 5650689 -245037165 + AT_rich Low_complexity Low_complexity 1 21 0 710 191 111 5 chr2 5651220 5651409 -245036445 + L1MD3 LINE L1 6906 7114 -881 607 235 96 24 chr2 5651414 5651580 -245036274 + MER45A DNA AcHobo 1 178 0 376 323 16 8 chr2 5651592 5651719 -245036135 - MER5A DNA MER1_type -51 138 11 413 309 74 67 chr2 5652069 5652490 -245035364 + L1MEc LINE L1 2099 2500 -3715 1769 181 0 0 chr2 5652490 5652796 -245035058 + AluSx SINE Alu 1 306 0 413 309 74 67 chr2 5652796 5652965 -245034889 + L1MEc LINE L1 2500 2666 -3549 2442 125 43 14 chr2 5654238 5654590 -245033264 - THE1B LTR MaLR 0 364 3 12286 100 11 0 chr2 5654592 5656154 -245031700 - THE1B-int LTR MaLR 0 1580 2 2481 137 31 14 chr2 5656155 5656513 -245031341 - THE1B LTR MaLR 0 364 1 22 56 0 0 chr2 5656519 5656555 -245031299 + AT_rich Low_complexity Low_complexity 1 36 0 1897 146 13 23 chr2 5658518 5658820 -245029034 - AluJo SINE Alu -13 299 1 1981 139 4 0 chr2 5658866 5659186 -245028668 + AluSx SINE Alu 1 321 0 234 116 0 0 chr2 5661519 5661562 -245026292 + (T)n Simple_repeat Simple_repeat 1 43 0 323 275 44 0 chr2 5661861 5661952 -245025902 - MIR SINE MIR -62 146 52 317 301 82 35 chr2 5662179 5662495 -245025359 + L1ME LINE L1 5352 5682 -439 467 295 45 54 chr2 5662609 5662833 -245025021 + MIR SINE MIR 14 235 -27 235 188 104 0 chr2 5663266 5663314 -245024540 + L2 LINE L2 3256 3308 -5 1754 182 3 0 chr2 5663336 5663627 -245024227 + AluJb SINE Alu 12 303 -9 5029 68 0 0 chr2 5663753 5664343 -245023511 + LTR10C LTR ERV1 1 590 -1 1767 132 81 45 chr2 5664557 5664914 -245022940 - THE1C LTR MaLR 0 375 6 2080 120 3 30 chr2 5665443 5665742 -245022112 + AluSx SINE Alu 1 291 -21 10114 245 26 29 chr2 5666795 5666976 -245020878 + L1PA16 LINE L1 1983 2163 -4686 2037 151 3 0 chr2 5666976 5667288 -245020566 + AluSp SINE Alu 1 313 0 10114 245 26 29 chr2 5667288 5668742 -245019112 + L1PA16 LINE L1 2163 3620 -3229 2146 100 10 32 chr2 5668742 5669052 -245018802 + AluSq SINE Alu 1 303 -10 10114 245 26 29 chr2 5669052 5669768 -245018086 + L1PA16 LINE L1 3620 4337 -2512 261 0 0 0 chr2 5669768 5669797 -245018057 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10114 245 26 29 chr2 5669797 5671608 -245016246 + L1PA16 LINE L1 4337 6033 -816 404 167 14 14 chr2 5671608 5671680 -245016174 + AluJ/FRAM SINE Alu 217 288 -24 23 0 0 0 chr2 5671680 5671703 -245016151 + AT_rich Low_complexity Low_complexity 1 23 0 2560 156 53 3 chr2 5671704 5672441 -245015413 + L1PA16 LINE L1 6025 6849 -20 22 70 0 0 chr2 5672664 5672707 -245015147 + AT_rich Low_complexity Low_complexity 1 43 0 300 346 88 16 chr2 5673926 5674108 -245013746 + L2 LINE L2 3078 3272 0 227 227 0 0 chr2 5674885 5674929 -245012925 - L3 LINE CR1 -7 1570 1527 2232 109 3 0 chr2 5675134 5675427 -245012427 - AluSg SINE Alu -16 294 1 243 281 92 59 chr2 5675467 5675620 -245012234 - MIR3 SINE MIR -48 160 3 626 276 119 16 chr2 5675678 5675921 -245011933 + MLT1J LTR MaLR 1 268 -243 339 65 0 0 chr2 5676100 5676146 -245011708 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 27671 82 8 5 chr2 5676146 5680733 -245007121 - L1PA6 LINE L1 -24 6130 1532 35016 85 4 12 chr2 5680867 5685794 -245002060 - L1P2 LINE L1 -683 5471 591 1437 228 83 41 chr2 5686034 5686469 -245001385 + MLT1C LTR MaLR 8 460 -7 2054 168 90 30 chr2 5686796 5687196 -245000658 - MSTA LTR MaLR -4 424 1 319 253 183 84 chr2 5687593 5687795 -245000059 + MLT1J LTR MaLR 129 350 -161 3416 66 49 5 chr2 5688058 5688483 -244999371 - MLT2A1 LTR ERVL 0 444 1 266 309 57 16 chr2 5688683 5688877 -244998977 + L1ME4a LINE L1 5714 5915 -206 1873 102 4 8 chr2 5688888 5689144 -244998710 - AluSp SINE Alu -19 294 40 373 246 58 108 chr2 5689637 5689962 -244997892 + MER5C DNA MER1_type 14 322 -2 240 293 198 17 chr2 5691286 5691402 -244996452 - MIR SINE MIR -75 187 51 319 329 89 25 chr2 5691796 5692200 -244995654 - LTR16A LTR ERVL -13 437 8 1169 108 104 68 chr2 5692614 5692699 -244995155 - MER30 DNA MER1_type 0 230 150 2117 125 3 3 chr2 5692699 5692995 -244994859 - AluSc SINE Alu -13 296 1 1169 108 104 68 chr2 5692995 5693131 -244994723 - MER30 DNA MER1_type -80 150 1 184 328 33 0 chr2 5694192 5694253 -244993601 - L2 LINE L2 0 3272 3210 196 372 36 15 chr2 5695004 5695141 -244992713 - MIR SINE MIR -85 177 38 519 289 17 6 chr2 5695378 5695551 -244992303 - MER5B DNA MER1_type -1 177 3 220 283 17 17 chr2 5695602 5695662 -244992192 - MER5A DNA MER1_type -16 173 114 482 369 45 61 chr2 5695913 5696385 -244991469 - L2 LINE L2 -1809 1505 1042 316 265 27 13 chr2 5696477 5696615 -244991239 + MLT1I LTR MaLR 73 181 -228 890 269 88 7 chr2 5697472 5697588 -244990266 + MLT1A2 LTR MaLR 42 147 -227 252 0 0 0 chr2 5697588 5697616 -244990238 + (TG)n Simple_repeat Simple_repeat 1 28 0 890 269 88 7 chr2 5697616 5697807 -244990047 + MLT1A2 LTR MaLR 147 374 0 218 114 0 23 chr2 5698709 5698753 -244989101 + (TC)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr2 5698753 5698775 -244989079 + (CA)n Simple_repeat Simple_repeat 1 22 0 393 264 155 29 chr2 5699849 5700050 -244987804 + MIR SINE MIR 3 213 -49 195 42 0 0 chr2 5700083 5700107 -244987747 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 801 31 0 0 chr2 5700108 5700204 -244987650 + (TCTA)n Simple_repeat Simple_repeat 4 99 0 302 67 22 0 chr2 5700493 5700538 -244987316 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 202 367 93 4 chr2 5700565 5700843 -244987011 + L3 LINE CR1 1128 1430 -147 438 318 42 42 chr2 5703120 5703356 -244984498 + MIR SINE MIR 21 256 -6 1320 88 0 0 chr2 5703718 5703888 -244983966 + AluY SINE Alu 126 295 -16 187 296 74 0 chr2 5704890 5704944 -244982910 - MER5B DNA MER1_type 0 178 121 38 22 0 0 chr2 5705387 5705432 -244982422 + AT_rich Low_complexity Low_complexity 1 45 0 2254 118 0 0 chr2 5705432 5705736 -244982118 + AluSc SINE Alu 3 306 -3 234 292 119 64 chr2 5706344 5706563 -244981291 + MIR SINE MIR 13 243 -19 793 219 39 0 chr2 5706835 5707040 -244980814 + L1MD2 LINE L1 5656 5868 -491 2299 95 0 0 chr2 5707984 5708290 -244979564 + AluY SINE Alu 1 306 -5 2079 90 62 3 chr2 5708326 5708615 -244979239 + AluSq SINE Alu 1 306 -7 394 274 15 22 chr2 5710158 5710293 -244977561 - MER94 DNA DNA 0 134 1 451 235 76 0 chr2 5710551 5710683 -244977171 - MER63 DNA MER1_type -276 786 19 12131 162 56 9 chr2 5711440 5713749 -244974105 - Tigger1 DNA MER2_type 0 2418 3 366 309 53 33 chr2 5713800 5714073 -244973781 - L1ME2 LINE L1 -4 6162 5879 1368 263 85 48 chr2 5714176 5714500 -244973354 - L1ME2 LINE L1 -277 5889 5578 2103 94 10 39 chr2 5714500 5714807 -244973047 - AluSg SINE Alu -11 299 2 1368 263 85 48 chr2 5714807 5716197 -244971657 - L1ME2 LINE L1 -588 5578 4124 26 0 0 0 chr2 5716215 5716241 -244971613 + AT_rich Low_complexity Low_complexity 1 26 0 293 274 105 0 chr2 5716241 5716365 -244971489 - L1ME2 LINE L1 -2210 3936 3800 22 70 0 0 chr2 5716394 5716437 -244971417 + AT_rich Low_complexity Low_complexity 1 43 0 29 60 0 0 chr2 5716842 5716892 -244970962 + AT_rich Low_complexity Low_complexity 1 50 0 442 177 14 34 chr2 5717489 5717636 -244970218 + CT-rich Low_complexity Low_complexity 1 144 0 820 126 6 27 chr2 5717636 5717819 -244970035 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 296 297 7 83 chr2 5718316 5718461 -244969393 + MIR SINE MIR 47 180 -82 408 348 45 8 chr2 5718534 5718781 -244969073 + LTR16A LTR ERVL 56 311 -139 237 65 0 0 chr2 5718786 5718817 -244969037 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 1768 147 53 3 chr2 5718820 5719105 -244968749 - AluSx SINE Alu -13 299 1 212 186 17 0 chr2 5720111 5720170 -244967684 + CT-rich Low_complexity Low_complexity 1 60 0 2184 132 6 0 chr2 5720593 5720904 -244966950 + AluSq SINE Alu 1 313 0 979 232 31 37 chr2 5721322 5721649 -244966205 - L1MB8 LINE L1 0 6178 5854 184 360 0 0 chr2 5722298 5722348 -244965506 + L2 LINE L2 3206 3255 -17 501 135 0 0 chr2 5722351 5722440 -244965414 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 210 139 0 70 chr2 5722440 5722483 -244965371 + (GGGGA)n Simple_repeat Simple_repeat 5 44 0 186 208 0 0 chr2 5723045 5723093 -244964761 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 234 31 62 chr2 5724021 5724085 -244963769 - L2 LINE L2 -11 3302 3241 444 330 62 20 chr2 5724122 5724339 -244963515 - MIR SINE MIR -1 261 37 3808 79 119 0 chr2 5726208 5726361 -244961493 - LTR66 LTR ERVL 0 610 477 327 113 0 0 chr2 5726361 5726423 -244961431 + (TA)n Simple_repeat Simple_repeat 2 63 0 3808 79 119 0 chr2 5726423 5726814 -244961040 - LTR66 LTR ERVL -133 477 1 27 0 0 0 chr2 5727655 5727682 -244960172 + AT_rich Low_complexity Low_complexity 1 27 0 226 294 43 22 chr2 5728021 5728113 -244959741 - MIR3 SINE MIR -6 202 109 27 29 0 0 chr2 5728476 5728510 -244959344 + AT_rich Low_complexity Low_complexity 1 34 0 1922 147 0 0 chr2 5729064 5729349 -244958505 + AluSg SINE Alu 1 285 -25 355 224 129 20 chr2 5729398 5729545 -244958309 + L1MDb LINE L1 1178 1340 -5069 5575 168 24 45 chr2 5731220 5732474 -244955380 - Tigger3b DNA MER2_type -3 1228 1 402 306 80 55 chr2 5733543 5733941 -244953913 + L2 LINE L2 1901 2308 -1006 895 229 89 50 chr2 5734287 5734645 -244953209 - MLT1A2 LTR MaLR -2 372 1 731 196 7 0 chr2 5735871 5736009 -244951845 - AluJb SINE Alu 0 312 174 2449 231 63 13 chr2 5736136 5736657 -244951197 - L1MB7 LINE L1 -101 6083 5590 2425 71 0 10 chr2 5736657 5736968 -244950886 - AluY SINE Alu -3 308 1 2449 231 63 13 chr2 5736968 5737695 -244950159 - L1MB7 LINE L1 -594 5590 4786 710 207 27 0 chr2 5737695 5737845 -244950009 - MLT1A1 LTR MaLR 0 365 212 1279 173 38 114 chr2 5738028 5738254 -244949600 + MLT1B LTR MaLR 1 182 -208 2060 139 0 3 chr2 5738254 5738557 -244949297 + AluSx SINE Alu 2 303 -9 1279 173 38 114 chr2 5738557 5738752 -244949102 + MLT1B LTR MaLR 182 390 0 713 179 20 4 chr2 5739271 5739527 -244948327 + (TG)n Simple_repeat Simple_repeat 1 260 0 2053 103 33 98 chr2 5742195 5742271 -244945583 - THE1B LTR MaLR 0 364 285 2075 127 14 0 chr2 5742271 5742562 -244945292 - AluSx SINE Alu -17 295 1 2053 103 33 98 chr2 5742562 5742874 -244944980 - THE1B LTR MaLR -79 285 1 265 286 53 85 chr2 5742967 5743134 -244944720 - MIR SINE MIR -27 235 73 1411 189 103 49 chr2 5743134 5743504 -244944350 - MLT1B LTR MaLR 0 390 1 265 286 53 85 chr2 5743504 5743525 -244944329 - MIR SINE MIR -189 73 53 213 298 53 0 chr2 5743738 5743795 -244944059 + MIR SINE MIR 1 60 -202 338 217 0 0 chr2 5743843 5743912 -244943942 - L2 LINE L2 -3 3310 3242 303 28 0 0 chr2 5745010 5745046 -244942808 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2567 50 0 0 chr2 5745049 5745350 -244942504 - AluY SINE Alu -10 301 1 697 150 36 7 chr2 5746270 5746410 -244941444 + L1PA15 LINE L1 6021 6164 -1 341 282 103 5 chr2 5746453 5746666 -244941188 + HAL1b LINE L1 260 493 -855 227 276 20 0 chr2 5746844 5746942 -244940912 + (TA)n Simple_repeat Simple_repeat 2 101 0 258 32 0 0 chr2 5746990 5747021 -244940833 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2165 100 11 0 chr2 5747023 5747302 -244940552 - AluSq SINE Alu -28 285 4 1863 182 42 25 chr2 5747347 5747697 -244940157 - L1PB4 LINE L1 0 6156 5796 234 62 0 0 chr2 5747697 5747729 -244940125 + (TG)n Simple_repeat Simple_repeat 2 33 0 1863 182 42 25 chr2 5747729 5747811 -244940043 - L1PB4 LINE L1 -360 5796 5717 225 65 0 0 chr2 5748520 5748551 -244939303 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2223 116 0 7 chr2 5748620 5748930 -244938924 + AluSq SINE Alu 1 308 -5 259 337 37 37 chr2 5749225 5749412 -244938442 + MIR SINE MIR 71 257 -5 651 236 21 82 chr2 5751503 5751736 -244936118 + MLT1A1 LTR MaLR 1 219 -146 242 248 31 39 chr2 5753524 5753653 -244934201 - L1ME LINE L1 -202 5919 5792 231 88 0 0 chr2 5753674 5753708 -244934146 + (TG)n Simple_repeat Simple_repeat 2 35 0 531 299 55 10 chr2 5754188 5754397 -244933457 - MIR SINE MIR -29 233 17 383 37 0 19 chr2 5754614 5754668 -244933186 + (TG)n Simple_repeat Simple_repeat 2 54 0 2239 96 33 7 chr2 5755760 5756062 -244931792 + AluSg SINE Alu 1 310 0 254 231 0 0 chr2 5756208 5756273 -244931581 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1682 166 39 34 chr2 5756420 5756776 -244931078 - MLT1A1 LTR MaLR -7 358 1 793 176 0 0 chr2 5756777 5756925 -244930929 - L1MB1 LINE L1 -17 6151 6004 411 183 0 0 chr2 5756988 5757070 -244930784 + AluJ/FRAM SINE Alu 222 303 -9 199 383 8 39 chr2 5757368 5757496 -244930358 + L2 LINE L2 3148 3271 -1 744 171 8 0 chr2 5758424 5758547 -244929307 + FLAM_C SINE Alu 2 125 -8 274 371 61 0 chr2 5758699 5758831 -244929023 + MIR SINE MIR 53 192 -70 231 170 0 0 chr2 5758902 5758949 -244928905 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 308 48 14 chr2 5759376 5759522 -244928332 + MER5B DNA MER1_type 28 178 0 193 296 14 28 chr2 5759599 5759670 -244928184 + L2 LINE L2 3194 3263 -9 1143 281 132 14 chr2 5760065 5760582 -244927272 - L2 LINE L2 -575 2739 2162 401 283 121 38 chr2 5761300 5761646 -244926208 + LTR16A1 LTR ERVL 71 445 -12 2270 108 7 0 chr2 5761796 5762103 -244925751 + AluSg SINE Alu 1 309 -1 1768 177 29 13 chr2 5762897 5763280 -244924574 + MLT2B1 LTR ERVL 2 436 -79 184 57 29 29 chr2 5763287 5763322 -244924532 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 21 71 0 0 chr2 5763754 5763796 -244924058 + AT_rich Low_complexity Low_complexity 1 42 0 268 385 39 26 chr2 5765686 5765842 -244922012 + MIR SINE MIR 15 172 -90 2238 169 26 28 chr2 5767029 5767456 -244920398 + MSTB LTR MaLR 1 426 0 1093 232 14 21 chr2 5767526 5767806 -244920048 + MLT1A1 LTR MaLR 1 278 -87 2314 106 0 0 chr2 5767932 5768234 -244919620 + AluSx SINE Alu 1 302 -10 461 268 176 0 chr2 5768245 5768387 -244919467 - MER96 DNA MER1_type? -1 174 8 508 296 36 13 chr2 5768760 5769067 -244918787 + L1M4 LINE L1 3387 3700 -2446 235 138 0 52 chr2 5769082 5769140 -244918714 + (TA)n Simple_repeat Simple_repeat 2 56 0 560 247 71 61 chr2 5769149 5769445 -244918409 + L1M4 LINE L1 3719 4017 -2129 1721 161 32 7 chr2 5769541 5769844 -244918010 - AluJb SINE Alu 0 310 1 1684 242 138 9 chr2 5769961 5770656 -244917198 + L1M4 LINE L1 4493 5277 -869 6208 186 17 5 chr2 5770664 5772494 -244915360 + L1P5 LINE L1 3823 5679 -472 275 257 67 0 chr2 5772789 5772894 -244914960 + MARNA DNA Mariner 461 572 -14 23 68 0 0 chr2 5773484 5773528 -244914326 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 5773992 5774022 -244913832 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 5774143 5774171 -244913683 + AT_rich Low_complexity Low_complexity 1 28 0 223 306 61 20 chr2 5774391 5774489 -244913365 - MIR SINE MIR -95 167 66 258 400 40 0 chr2 5776104 5776229 -244911625 - L2 LINE L2 -237 3035 2906 1270 187 239 16 chr2 5776293 5776673 -244911181 - MER31B LTR ERV1 -1 465 1 181 281 73 31 chr2 5776699 5776795 -244911059 - L2 LINE L2 -480 2834 2735 366 332 75 11 chr2 5777540 5777727 -244910127 + MIR SINE MIR 53 251 -11 212 175 25 0 chr2 5778550 5778590 -244909264 + CT-rich Low_complexity Low_complexity 1 41 0 210 208 75 0 chr2 5779310 5779363 -244908491 - MIR SINE MIR -142 120 64 194 333 25 37 chr2 5779399 5779480 -244908374 + MIR SINE MIR 63 142 -120 3779 113 53 14 chr2 5779712 5779939 -244907915 - L1MA3 LINE L1 0 6305 6088 269 68 23 0 chr2 5779939 5779983 -244907871 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 3779 113 53 14 chr2 5779983 5780393 -244907461 - L1MA3 LINE L1 -217 6088 5643 255 217 0 0 chr2 5780393 5780453 -244907401 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 787 115 3 0 chr2 5780456 5780588 -244907266 - L1MA3 LINE L1 -651 5649 5514 232 341 57 16 chr2 5781328 5781451 -244906403 + MIR SINE MIR 67 194 -68 1995 113 60 0 chr2 5781453 5781737 -244906117 + AluSx SINE Alu 1 301 -11 1494 190 10 14 chr2 5782017 5782306 -244905548 + AluJo SINE Alu 1 288 -24 30 45 0 0 chr2 5782306 5782350 -244905504 + AT_rich Low_complexity Low_complexity 1 44 0 204 264 138 11 chr2 5782482 5782569 -244905285 + L2 LINE L2 3174 3271 -1 186 103 0 0 chr2 5782619 5782648 -244905206 + (TG)n Simple_repeat Simple_repeat 2 30 0 2181 105 7 0 chr2 5782995 5783281 -244904573 + AluSx SINE Alu 1 288 -24 319 326 17 12 chr2 5784698 5784870 -244902984 - MLT1L LTR MaLR 0 615 443 323 258 75 0 chr2 5786445 5786538 -244901316 - MER45A DNA AcHobo -53 125 26 313 356 31 6 chr2 5786615 5786775 -244901079 + MIR SINE MIR 48 211 -51 2408 68 3 3 chr2 5787122 5787433 -244900421 + AluY SINE Alu 1 311 0 1637 161 39 86 chr2 5787451 5787835 -244900019 + MER47A DNA MER2_type 1 366 0 2129 110 0 0 chr2 5788623 5788931 -244898923 - AluY SINE Alu 0 308 1 183 328 16 64 chr2 5790030 5790155 -244897699 - L3 LINE CR1 -1 1576 1458 33 0 0 0 chr2 5792499 5792532 -244895322 + AT_rich Low_complexity Low_complexity 1 33 0 182 333 48 0 chr2 5792667 5792730 -244895124 - MIR SINE MIR -119 143 78 2418 238 67 12 chr2 5792976 5793573 -244894281 - LTR27 LTR ERV1 0 636 7 1652 171 14 73 chr2 5793746 5794115 -244893739 - MLT1B LTR MaLR 0 390 44 278 250 0 0 chr2 5794628 5794688 -244893166 + MIR SINE MIR 87 146 -62 279 314 69 10 chr2 5794820 5794922 -244892932 - MIR SINE MIR -48 214 107 23 0 0 0 chr2 5796725 5796748 -244891106 + AT_rich Low_complexity Low_complexity 1 23 0 199 338 0 15 chr2 5798491 5798559 -244889295 - MIR SINE MIR -76 186 120 294 274 96 37 chr2 5800882 5801017 -244886837 + MIR3 SINE MIR 63 205 -3 333 315 19 9 chr2 5801201 5801309 -244886545 + L2 LINE L2 3154 3262 -51 241 47 156 16 chr2 5801362 5801426 -244886428 + (TTAAA)n Simple_repeat Simple_repeat 4 76 0 327 191 0 32 chr2 5801726 5801852 -244886002 + GA-rich Low_complexity Low_complexity 3 124 0 1465 191 28 3 chr2 5801875 5802158 -244885696 + AluJo SINE Alu 9 298 -14 809 51 5 82 chr2 5802193 5802388 -244885466 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 276 163 0 50 chr2 5802372 5802452 -244885402 + GA-rich Low_complexity Low_complexity 3 78 0 * 480 191 40 0 chr2 5802600 5802726 -244885128 + GA-rich Low_complexity Low_complexity 4 134 0 2093 122 0 7 chr2 5802848 5803143 -244884711 + AluSx SINE Alu 1 293 -19 5816 245 31 37 chr2 5803545 5804664 -244883190 + L1M4 LINE L1 20 1524 -5121 2078 131 0 0 chr2 5804664 5804966 -244882888 + AluSx SINE Alu 1 302 0 5816 245 31 37 chr2 5804966 5805610 -244882244 + L1M4 LINE L1 1524 2171 -4474 4153 227 112 68 chr2 5805640 5807072 -244880782 + L1MDa LINE L1 35 1542 -4998 1969 172 143 8 chr2 5807072 5807449 -244880405 - MSTA LTR MaLR 0 428 1 4153 227 112 68 chr2 5807449 5807565 -244880289 + L1MDa LINE L1 1542 1651 -4889 2572 267 56 49 chr2 5807596 5809294 -244878560 - L1PA12 LINE L1 -5608 1973 1 343 167 61 0 chr2 5809393 5809459 -244878395 - L1MDa LINE L1 -6436 104 35 23 0 0 0 chr2 5811342 5811365 -244876489 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 5811635 5811657 -244876197 + AT_rich Low_complexity Low_complexity 1 22 0 657 298 38 78 chr2 5813071 5813417 -244874437 + MLT1H LTR MaLR 23 354 -195 4666 215 42 82 chr2 5815331 5816839 -244871015 - Charlie1a DNA MER1_type -1 1454 6 200 306 145 40 chr2 5817978 5818102 -244869752 + L2 LINE L2 3136 3272 0 2185 253 54 19 chr2 5818401 5818904 -244868950 - L1 LINE L1 -2580 3566 3082 2225 147 86 18 chr2 5818904 5819299 -244868555 - MSTB LTR MaLR -4 422 1 2185 253 54 19 chr2 5819299 5819796 -244868058 - L1 LINE L1 -3064 3082 2498 1681 239 121 63 chr2 5819793 5820380 -244867474 - L1M4b LINE L1 -6219 640 20 * 378 335 107 5 chr2 5822339 5822545 -244865309 + MIR SINE MIR 31 257 -5 705 73 0 0 chr2 5823237 5823333 -244864521 + (TA)n Simple_repeat Simple_repeat 2 97 0 234 0 0 0 chr2 5823573 5823599 -244864255 + (TA)n Simple_repeat Simple_repeat 2 27 0 387 317 42 7 chr2 5824556 5824698 -244863156 + MIR SINE MIR 7 153 -109 2249 110 3 7 chr2 5828248 5828557 -244859297 - AluSq SINE Alu -5 308 1 693 290 157 34 chr2 5830023 5830430 -244857424 - LTR16B LTR ERVL -1 463 7 2384 138 119 8 chr2 5832877 5833262 -244854592 - MSTA LTR MaLR 0 428 1 439 331 82 5 chr2 5833433 5833617 -244854237 - L2 LINE L2 -163 3109 2912 259 150 33 0 chr2 5833642 5833702 -244854152 + CT-rich Low_complexity Low_complexity 3 64 0 1910 197 110 22 chr2 5833710 5834212 -244853642 - LTR10B LTR ERV1 -1 546 1 270 253 179 0 chr2 5834342 5834437 -244853417 - MLT1D LTR MaLR 0 505 394 370 313 96 34 chr2 5834762 5835314 -244852540 - L1ME3A LINE L1 -239 5931 5346 27 29 0 0 chr2 5835492 5835526 -244852328 + AT_rich Low_complexity Low_complexity 1 34 0 426 302 101 28 chr2 5835554 5835842 -244852012 - L1ME3A LINE L1 -1108 5038 4730 2260 113 0 0 chr2 5835868 5836169 -244851685 - AluSq SINE Alu -12 301 1 227 286 160 45 chr2 5836266 5836467 -244851387 + MIR SINE MIR 36 256 -6 21 0 0 0 chr2 5836542 5836563 -244851291 + AT_rich Low_complexity Low_complexity 1 21 0 202 321 136 31 chr2 5837110 5837272 -244850582 - MIR SINE MIR -6 256 78 1401 208 71 75 chr2 5837275 5837742 -244850112 - MLT1C LTR MaLR -2 465 1 345 47 0 0 chr2 5837753 5837796 -244850058 + (TG)n Simple_repeat Simple_repeat 2 44 0 398 336 39 50 chr2 5837960 5838219 -244849635 + L3 LINE CR1 836 1091 -486 225 245 43 43 chr2 5838219 5838313 -244849541 - MLT1J1 LTR MaLR 0 446 353 1585 211 38 30 chr2 5838324 5838694 -244849160 + MLT1A2 LTR MaLR 2 374 0 2494 67 3 0 chr2 5840026 5840326 -244847528 - AluY SINE Alu -10 301 1 262 279 38 13 chr2 5840736 5840815 -244847039 - MLT1G LTR MaLR -503 87 7 954 151 0 0 chr2 5841089 5841241 -244846613 + L1PBa LINE L1 3 154 -6709 430 176 12 0 chr2 5841307 5841392 -244846462 + L1PBa LINE L1 856 941 -5922 7316 208 17 3 chr2 5841484 5843611 -244844243 + L1PBa LINE L1 177 1644 -5219 227 88 29 0 chr2 5843611 5843645 -244844209 + MSTA LTR MaLR 1 35 -393 203 274 96 59 chr2 5844121 5844256 -244843598 + MER5B DNA MER1_type 5 144 -34 286 214 87 29 chr2 5844141 5844244 -244843610 - MER5A DNA MER1_type -22 167 59 2321 100 0 0 chr2 5844469 5844770 -244843084 + AluSx SINE Alu 1 301 -11 2807 145 59 11 chr2 5846579 5847104 -244840750 + Tigger3(Golem) DNA MER2_type 2478 3027 -2 328 202 16 57 chr2 5847104 5847227 -244840627 - Charlie2 DNA MER1_type -507 2355 2238 523 297 72 14 chr2 5847323 5847532 -244840322 - Charlie2 DNA MER1_type -2614 248 28 1877 207 71 7 chr2 5848000 5848405 -244839449 + MLT2C2 LTR ERVL 3 534 -20 361 244 47 0 chr2 5848415 5848501 -244839353 - L1MC4 LINE L1 -1339 6703 6614 302 183 0 17 chr2 5848472 5848532 -244839322 - L1MCa LINE L1 -4362 2064 2006 * 401 326 102 5 chr2 5848589 5848785 -244839069 + MIR SINE MIR 23 237 -25 265 137 63 105 chr2 5849356 5849451 -244838403 + L2 LINE L2 3117 3207 -106 344 229 0 0 chr2 5849929 5849999 -244837855 + MIR SINE MIR 86 155 -107 286 174 0 10 chr2 5850007 5850076 -244837778 - MLT2D LTR ERVL -2 412 367 738 209 10 19 chr2 5850076 5850494 -244837360 + (CATATA)n Simple_repeat Simple_repeat 1 414 0 225 231 0 0 chr2 5850494 5850546 -244837308 - L1MC4 LINE L1 -1343 6699 6648 585 173 27 0 chr2 5850548 5850698 -244837156 + (CATATA)n Simple_repeat Simple_repeat 4 157 0 2088 189 16 7 chr2 5850698 5851080 -244836774 - MLT2D LTR ERVL -40 480 1 1191 231 19 68 chr2 5852611 5853087 -244834767 + L1MA9 LINE L1 5836 6282 -30 281 26 26 0 chr2 5853158 5853196 -244834658 + (CA)n Simple_repeat Simple_repeat 2 40 0 1189 282 61 22 chr2 5853772 5854261 -244833593 - MLT1H LTR MaLR -41 508 1 356 271 62 8 chr2 5854706 5854835 -244833019 - MLT1I LTR MaLR 0 409 274 598 215 66 0 chr2 5854935 5855056 -244832798 + FLAM_A SINE Alu 1 129 -4 180 366 43 0 chr2 5855720 5855813 -244832041 - MIR SINE MIR -59 203 107 256 196 0 0 chr2 5857239 5857285 -244830569 + L2 LINE L2 3261 3306 -7 290 326 120 23 chr2 5857300 5857611 -244830243 - L2 LINE L2 -2 3270 2871 183 266 0 0 chr2 5857621 5857685 -244830169 + (TTCA)n Simple_repeat Simple_repeat 3 66 0 3153 236 74 10 chr2 5857885 5859120 -244828734 + Charlie1a DNA MER1_type 1 1384 -71 537 275 80 40 chr2 5859388 5859463 -244828391 - MIR SINE MIR -29 233 162 2774 110 6 3 chr2 5859463 5859826 -244828028 + THE1B LTR MaLR 1 364 0 537 275 80 40 chr2 5859826 5859950 -244827904 - MIR SINE MIR -100 162 26 193 239 0 0 chr2 5860827 5860873 -244826981 + MER5A DNA MER1_type 122 167 -22 1376 231 21 43 chr2 5861722 5862095 -244825759 + MLT1A1 LTR MaLR 1 365 0 331 318 18 17 chr2 5862691 5862890 -244824964 - L1M4 LINE L1 -1044 5102 4903 339 254 114 71 chr2 5862933 5863284 -244824570 - L1M4 LINE L1 -1316 4830 4465 1031 145 6 0 chr2 5863320 5863486 -244824368 - AluSg/x SINE Alu -5 307 141 304 291 54 51 chr2 5863491 5863786 -244824068 - L1M4 LINE L1 -1730 4416 4121 851 179 118 5 chr2 5863787 5863999 -244823855 + MER44D DNA MER2_type 2 507 -102 2687 151 31 7 chr2 5863999 5864415 -244823439 - MSTA LTR MaLR -2 426 1 982 154 6 0 chr2 5864419 5864575 -244823279 + AluSg/x SINE Alu 145 301 -9 1715 131 95 0 chr2 5864781 5865064 -244822790 + AluSx SINE Alu 1 310 -2 283 146 45 22 chr2 5865699 5865788 -244822066 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 380 301 70 7 chr2 5866416 5866559 -244821295 + MER5B DNA MER1_type 1 152 -26 189 0 0 0 chr2 5866714 5866735 -244821119 + (T)n Simple_repeat Simple_repeat 1 21 0 207 243 29 0 chr2 5867218 5867288 -244820566 + (TA)n Simple_repeat Simple_repeat 2 73 0 241 321 89 0 chr2 5867477 5867589 -244820265 - MIR SINE MIR -70 192 71 356 47 0 0 chr2 5869162 5869205 -244818649 + (TG)n Simple_repeat Simple_repeat 2 44 0 210 338 15 0 chr2 5870069 5870137 -244817717 + MIR3 SINE MIR 137 205 -3 1026 194 10 5 chr2 5870261 5870457 -244817397 - MLT2C1 LTR ERVL -54 343 147 1297 214 143 31 chr2 5870460 5870816 -244817038 - MSTD LTR MaLR 0 396 1 1256 239 49 3 chr2 5870816 5871121 -244816733 - MSTD-int LTR MaLR 0 1735 1417 1547 163 71 37 chr2 5871121 5871447 -244816407 + THE1C LTR MaLR 1 337 -38 3467 249 114 37 chr2 5871565 5872756 -244815098 - MSTD-int LTR MaLR -369 1282 1 1463 236 87 47 chr2 5872756 5873137 -244814717 - MSTD LTR MaLR 0 396 1 877 140 7 0 chr2 5873137 5873280 -244814574 - MLT2C2 LTR ERVL -316 148 5 334 222 13 6 chr2 5874109 5874267 -244813587 + GA-rich Low_complexity Low_complexity 1 159 0 2158 130 0 0 chr2 5874526 5874833 -244813021 + AluSx SINE Alu 5 311 -1 636 269 47 96 chr2 5875150 5875537 -244812317 + LTR16B LTR ERVL 84 451 -13 477 278 28 0 chr2 5875543 5875651 -244812203 - MER81 DNA DNA -2 112 2 219 308 187 19 chr2 5876102 5876209 -244811645 - L2 LINE L2 -1 3271 3147 210 128 0 0 chr2 5876282 5876321 -244811533 + (TTA)n Simple_repeat Simple_repeat 3 41 0 224 399 35 35 chr2 5876353 5876556 -244811298 - L2 LINE L2 -244 3028 2826 1097 203 22 22 chr2 5876589 5876821 -244811033 + MLT1A1 LTR MaLR 1 232 -133 2011 184 49 0 chr2 5876827 5877175 -244810679 - MLT1A1 LTR MaLR 0 365 1 196 221 52 91 chr2 5878074 5878151 -244809703 - MIR SINE MIR -108 154 81 384 269 99 41 chr2 5878534 5878705 -244809149 + MLT1J2 LTR MaLR 270 450 0 275 360 124 22 chr2 5878719 5878994 -244808860 + L2 LINE L2 2571 2873 -441 2328 63 11 0 chr2 5879081 5879367 -244808487 - AluY SINE Alu -22 289 1 2895 200 107 74 chr2 5879367 5880288 -244807566 + MER63D DNA MER1_type 10 971 -90 1594 164 20 49 chr2 5880288 5880593 -244807261 + AluJb SINE Alu 1 296 -16 2895 200 107 74 chr2 5880593 5880685 -244807169 + MER63D DNA MER1_type 971 1059 -2 207 378 72 9 chr2 5880702 5880813 -244807041 + L2 LINE L2 2948 3065 -207 1637 234 121 59 chr2 5881510 5882189 -244805665 + MER50 LTR ERV1 14 734 0 245 414 21 21 chr2 5882514 5882705 -244805149 + MIR SINE MIR 47 237 -25 24 0 0 0 chr2 5882797 5882821 -244805033 + AT_rich Low_complexity Low_complexity 1 24 0 770 230 59 59 chr2 5882966 5883188 -244804666 + MIR SINE MIR 15 236 -26 2627 119 11 16 chr2 5883325 5883702 -244804152 - THE1C LTR MaLR 0 375 1 922 202 62 31 chr2 5884116 5884373 -244803481 + MER97a DNA MER1_type? 47 311 -583 3308 133 16 4 chr2 5884400 5884913 -244802941 - L1PA16 LINE L1 -140 6026 5508 9475 86 5 13 chr2 5885021 5886304 -244801550 - L1P3 LINE L1 -5188 1273 2 222 182 26 13 chr2 5886637 5886714 -244801140 + (TG)n Simple_repeat Simple_repeat 1 78 0 22 35 0 0 chr2 5887154 5887183 -244800671 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 5887227 5887249 -244800605 + AT_rich Low_complexity Low_complexity 1 22 0 726 155 17 28 chr2 5888269 5888450 -244799404 + GA-rich Low_complexity Low_complexity 2 180 0 22 35 0 0 chr2 5890505 5890534 -244797320 + AT_rich Low_complexity Low_complexity 1 29 0 1422 266 113 28 chr2 5891801 5892597 -244795257 + HAL1 LINE L1 1028 1891 -616 451 245 113 34 chr2 5893476 5893741 -244794113 - L1ME4a LINE L1 -219 5902 5617 255 237 55 48 chr2 5893892 5894011 -244793843 - L1ME4a LINE L1 -929 5404 5299 200 362 140 9 chr2 5894188 5894409 -244793445 + L2 LINE L2 2436 2685 -629 531 235 75 30 chr2 5894532 5894959 -244792895 + MLT1C LTR MaLR 6 467 0 3096 86 7 18 chr2 5895063 5895518 -244792336 - L1PA13 LINE L1 -4 6159 5710 204 233 0 0 chr2 5895995 5896038 -244791816 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 456 277 119 45 chr2 5896094 5896672 -244791182 - L1ME4a LINE L1 -238 5883 5263 802 165 170 6 chr2 5896745 5896927 -244790927 - Tigger5 DNA MER2_type 0 2323 2112 1040 257 55 3 chr2 5896932 5897224 -244790630 - Tigger5 DNA MER2_type -2016 307 1 1881 110 18 18 chr2 5901035 5901337 -244786517 - AluSg SINE Alu 0 302 1 2020 135 0 0 chr2 5901626 5901929 -244785925 - AluSx SINE Alu 0 303 1 28 0 0 0 chr2 5902497 5902525 -244785329 + AT_rich Low_complexity Low_complexity 1 28 0 851 151 20 0 chr2 5904512 5904664 -244783190 + MLT2D LTR ERVL 1 155 -259 229 143 143 18 chr2 5904731 5904787 -244783067 - MLT2C2 LTR ERVL -285 179 117 * 1005 209 34 34 chr2 5904751 5905019 -244782835 + MLT2D LTR ERVL 145 412 -2 1159 221 130 54 chr2 5905069 5905519 -244782335 + MLT2B1 LTR ERVL 1 492 -28 324 0 0 0 chr2 5905519 5905555 -244782299 + (CA)n Simple_repeat Simple_repeat 2 37 0 1159 221 130 54 chr2 5905555 5905587 -244782267 + MLT2B1 LTR ERVL 492 520 0 188 358 59 64 chr2 5905631 5905835 -244782019 - L2 LINE L2 -113 3159 2957 2438 152 11 2 chr2 5905969 5906410 -244781444 - L1PB4 LINE L1 -318 5838 5394 1475 163 50 50 chr2 5906715 5907040 -244780814 - AluJo SINE Alu 0 327 3 205 319 87 0 chr2 5908191 5908260 -244779594 + MER91C DNA MER1_type 48 122 -18 915 202 0 22 chr2 5908305 5908483 -244779371 + AluJb SINE Alu 127 300 -12 346 247 103 0 chr2 5909159 5909256 -244778598 - L2 LINE L2 -12 3260 3154 688 315 94 44 chr2 5910317 5911310 -244776544 - L2 LINE L2 -16 3297 2191 951 43 0 0 chr2 5911383 5911500 -244776354 + L1PA13 LINE L1 6041 6157 -6 1572 210 127 50 chr2 5911988 5912469 -244775385 + MLT2B1 LTR ERVL 1 518 -2 408 359 95 9 chr2 5915250 5915481 -244772373 + L1ME3A LINE L1 5549 5799 -2009 336 253 33 22 chr2 5916090 5916181 -244771673 - MIR SINE MIR -28 234 143 355 223 268 0 chr2 5916525 5916637 -244771217 - MIR SINE MIR -115 147 6 644 280 82 0 chr2 5916842 5917049 -244770805 + MER58A DNA MER1_type 1 224 0 319 115 0 0 chr2 5917573 5917625 -244770229 + MADE1 DNA Mariner 29 80 0 290 154 92 0 chr2 5918143 5918208 -244769646 + MER67A LTR ERV1 18 88 -455 1363 251 46 12 chr2 5918264 5918679 -244769175 + MER67A LTR ERV1 84 512 -31 257 303 50 10 chr2 5918804 5918903 -244768951 - MIR SINE MIR -59 203 101 345 390 39 18 chr2 5919332 5919614 -244768240 - L3 LINE CR1 -554 1023 736 456 289 70 18 chr2 5920344 5920686 -244767168 + L1M4 LINE L1 2201 2560 -3586 631 267 70 23 chr2 5920702 5920960 -244766894 + L1ME3A LINE L1 5859 6128 -42 625 316 201 5 chr2 5921159 5921533 -244766321 + L2 LINE L2 2867 3313 0 612 285 117 61 chr2 5922750 5923076 -244764778 + L2 LINE L2 2970 3313 0 26 0 0 0 chr2 5923166 5923192 -244764662 + AT_rich Low_complexity Low_complexity 1 26 0 276 280 75 19 chr2 5923265 5923372 -244764482 - MIR SINE MIR -142 120 8 420 37 0 0 chr2 5924046 5924100 -244763754 + (CA)n Simple_repeat Simple_repeat 2 55 0 375 368 0 0 chr2 5925094 5925219 -244762635 + MIR SINE MIR 22 146 -62 736 178 0 15 chr2 5925426 5925561 -244762293 + FLAM_C SINE Alu 1 133 0 497 156 33 25 chr2 5925566 5925688 -244762166 - MER53 DNA DNA -12 177 55 183 278 130 99 chr2 5926627 5926789 -244761065 + L3b LINE CR1 1337 1503 -80 228 364 78 31 chr2 5926835 5926964 -244760890 + MIR3 SINE MIR 11 145 -63 374 318 94 15 chr2 5927129 5927330 -244760524 + L3 LINE CR1 1361 1577 0 186 103 0 0 chr2 5927379 5927408 -244760446 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 303 257 59 65 chr2 5927643 5927834 -244760020 + MIR SINE MIR 5 196 -65 183 80 0 0 chr2 5929468 5929493 -244758361 + (GA)n Simple_repeat Simple_repeat 2 26 0 182 344 0 0 chr2 5929678 5929742 -244758112 - MIR SINE MIR -129 133 70 612 169 92 23 chr2 5929745 5929875 -244757979 - MSTA LTR MaLR -234 141 3 322 345 31 16 chr2 5929896 5930215 -244757639 + L1M4 LINE L1 3834 4157 -1989 22 0 0 0 chr2 5930281 5930303 -244757551 + AT_rich Low_complexity Low_complexity 1 22 0 225 275 12 12 chr2 5930335 5930415 -244757439 - LTR33A LTR ERVL 0 523 444 575 297 40 18 chr2 5930419 5930695 -244757159 - MLT1C LTR MaLR 0 467 186 705 279 8 8 chr2 5930820 5931074 -244756780 - MLT1C LTR MaLR -213 254 1 25 0 0 0 chr2 5931475 5931500 -244756354 + AT_rich Low_complexity Low_complexity 1 25 0 264 329 32 4 chr2 5931649 5931895 -244755959 + L1ME3A LINE L1 5695 5947 -223 417 278 115 14 chr2 5933572 5933781 -244754073 - LTR16A LTR ERVL -14 436 207 767 285 119 34 chr2 5933860 5934576 -244753278 + HAL1 LINE L1 979 1755 -752 1649 162 72 57 chr2 5934648 5935067 -244752787 - MSTB1 LTR MaLR -5 427 3 274 262 38 93 chr2 5935156 5935446 -244752408 + HAL1 LINE L1 1936 2209 -298 445 216 93 37 chr2 5935768 5935930 -244751924 + MLT1D LTR MaLR 22 192 -313 816 168 120 29 chr2 5935976 5936184 -244751670 + MLT1D LTR MaLR 279 505 0 295 228 114 74 chr2 5936535 5936684 -244751170 + MIR SINE MIR 19 173 -89 1827 166 3 0 chr2 5937230 5937513 -244750341 - AluJb SINE Alu -23 289 6 484 285 15 0 chr2 5937710 5937847 -244750007 + L3 LINE CR1 1201 1339 -238 305 328 25 25 chr2 5938238 5938360 -244749494 - MER5A DNA MER1_type -12 177 56 216 200 0 0 chr2 5938610 5938660 -244749194 + (TG)n Simple_repeat Simple_repeat 2 51 0 1399 273 22 0 chr2 5938675 5939185 -244748669 + L1M4 LINE L1 2110 2630 -3516 397 169 34 59 chr2 5939360 5939478 -244748376 - LTR67 LTR ERVL 0 557 443 2485 46 0 0 chr2 5941006 5941312 -244746542 - L1PA2 LINE L1 -7 6148 5843 304 87 0 0 chr2 5941699 5941745 -244746109 + MADE1 DNA Mariner 5 50 -30 921 160 30 5 chr2 5941753 5942388 -244745466 + (TCTA)n Simple_repeat Simple_repeat 1 651 0 402 21 0 0 chr2 5942409 5942456 -244745398 + (TG)n Simple_repeat Simple_repeat 2 48 0 271 338 163 0 chr2 5943010 5943170 -244744684 + MIR SINE MIR 77 262 0 21 36 0 0 chr2 5943454 5943482 -244744372 + AT_rich Low_complexity Low_complexity 1 28 0 295 312 22 14 chr2 5943603 5943741 -244744113 + MLT1J2 LTR MaLR 46 184 -266 28 48 0 0 chr2 5945508 5945550 -244742304 + AT_rich Low_complexity Low_complexity 1 42 0 6197 119 67 2 chr2 5945892 5946989 -244740865 - L1PBa LINE L1 -4016 2847 1680 1274 103 0 0 chr2 5947089 5947263 -244740591 + AluY SINE Alu 138 311 0 1490 134 0 0 chr2 5947620 5947836 -244740018 - AluY SINE Alu -13 298 83 983 192 0 0 chr2 5949327 5949494 -244738360 - FRAM SINE Alu -9 167 1 329 371 102 15 chr2 5949840 5950045 -244737809 + MIR SINE MIR 40 262 0 274 328 123 0 chr2 5950528 5950650 -244737204 - MIR SINE MIR -76 186 50 228 238 0 48 chr2 5952090 5952153 -244735701 + GA-rich Low_complexity Low_complexity 3 62 0 6320 196 48 11 chr2 5952554 5953679 -244734175 + L1 LINE L1 3180 4377 -1769 659 289 24 14 chr2 5953679 5953887 -244733967 - MER6B DNA MER2_type 0 210 1 6320 196 48 11 chr2 5953887 5954268 -244733586 + L1 LINE L1 4377 4742 -1404 5338 253 100 58 chr2 5954280 5956393 -244731461 - L1MDa LINE L1 -4336 2204 3 23 68 0 0 chr2 5956598 5956642 -244731212 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 5957075 5957101 -244730753 + AT_rich Low_complexity Low_complexity 1 26 0 431 272 109 22 chr2 5957961 5958145 -244729709 - MIR SINE MIR -15 247 48 421 288 14 63 chr2 5959660 5959882 -244727972 - L2 LINE L2 0 3313 3103 582 159 0 65 chr2 5959909 5960016 -244727838 + AluSq/x SINE Alu 14 113 -199 1054 73 15 0 chr2 5960016 5960152 -244727702 - THE1C LTR MaLR 0 375 238 938 243 136 20 chr2 5960164 5960604 -244727250 - L1M4 LINE L1 -2098 4048 3558 1262 114 15 0 chr2 5960607 5960808 -244727046 - L1MA3 LINE L1 0 6305 6102 5017 210 29 66 chr2 5960809 5962601 -244725253 - L1 LINE L1 -827 6738 5115 2177 116 3 0 chr2 5962601 5962902 -244724952 + AluSp SINE Alu 3 304 -9 5017 210 29 66 chr2 5962902 5963208 -244724646 - L1 LINE L1 -2450 5115 4799 956 93 8 0 chr2 5963212 5963341 -244724513 - AluSc SINE Alu -15 294 165 850 219 60 17 chr2 5963341 5963643 -244724211 - L1 LINE L1 -2759 4806 4492 6883 75 1 4 chr2 5963772 5964997 -244722857 - L1PA7 LINE L1 -29 6125 4906 14251 183 36 9 chr2 5965002 5967552 -244720302 - L1 LINE L1 -4936 2629 11 452 284 21 76 chr2 5967643 5968172 -244719682 - L1M4 LINE L1 -2696 3450 2951 26 50 0 0 chr2 5968862 5968902 -244718952 + AT_rich Low_complexity Low_complexity 1 40 0 206 264 0 0 chr2 5969985 5970038 -244717816 + L2 LINE L2 3203 3255 -17 256 279 67 19 chr2 5971379 5971483 -244716371 - MIR SINE MIR -64 144 36 395 295 26 58 chr2 5971484 5971640 -244716214 + MIR SINE MIR 56 206 -56 241 418 112 16 chr2 5971743 5971992 -244715862 - L2 LINE L2 -40 3232 2960 1701 252 89 29 chr2 5972096 5972755 -244715099 - L1ME1 LINE L1 -114 6550 5852 194 193 18 0 chr2 5972755 5972812 -244715042 + (TA)n Simple_repeat Simple_repeat 1 58 0 1957 260 131 121 chr2 5972822 5973494 -244714360 - L1ME1 LINE L1 -797 5847 5183 696 213 0 0 chr2 5973494 5973616 -244714238 + FAM SINE Alu 21 142 -43 1957 260 131 121 chr2 5973616 5974873 -244712981 - L1ME1 LINE L1 -1461 5183 3778 1146 237 28 59 chr2 5974889 5975244 -244712610 + MLT1A1 LTR MaLR 1 344 -21 614 244 0 0 chr2 5975242 5975361 -244712493 - MLT1A1 LTR MaLR -246 119 1 * 1086 242 93 8 chr2 5975430 5975645 -244712209 - L1ME1 LINE L1 -2884 3760 3565 273 57 0 0 chr2 5975645 5975680 -244712174 + (TG)n Simple_repeat Simple_repeat 2 36 0 1086 242 93 8 chr2 5975680 5975968 -244711886 - L1ME1 LINE L1 -3079 3565 3214 297 227 78 50 chr2 5975984 5976125 -244711729 - L1ME1 LINE L1 -6381 161 17 189 74 0 0 chr2 5977038 5977065 -244710789 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 1025 213 115 20 chr2 5977387 5977640 -244710214 + AluJo SINE Alu 1 277 -35 1965 138 7 3 chr2 5977658 5977949 -244709905 + AluSx SINE Alu 1 292 -20 36 40 0 0 chr2 5977949 5977999 -244709855 + AT_rich Low_complexity Low_complexity 1 50 0 222 311 27 14 chr2 5979148 5979222 -244708632 - MIR SINE MIR -150 112 38 731 160 33 0 chr2 5979349 5979499 -244708355 + BC200 scRNA scRNA 1 155 -45 180 239 68 45 chr2 5980774 5980862 -244706992 - MIR SINE MIR -103 105 16 27 73 0 0 chr2 5980952 5981007 -244706847 + AT_rich Low_complexity Low_complexity 1 55 0 278 325 71 26 chr2 5982544 5982698 -244705156 + L2 LINE L2 2914 3074 -198 217 354 25 0 chr2 5984841 5984920 -244702934 - L2 LINE L2 -5 3267 3187 487 324 62 29 chr2 5985800 5986041 -244701813 - MIR SINE MIR -11 251 3 562 311 42 33 chr2 5987556 5987768 -244700086 + MIR SINE MIR 46 259 -3 234 373 49 95 chr2 5987890 5988153 -244699701 - L2 LINE L2 -6 3266 3016 258 256 35 35 chr2 5988754 5988840 -244699014 + L2 LINE L2 3002 3087 -185 21 0 0 0 chr2 5988938 5988959 -244698895 + AT_rich Low_complexity Low_complexity 1 21 0 297 211 203 24 chr2 5990193 5990316 -244697538 - MER5A DNA MER1_type -2 187 43 284 269 120 0 chr2 5991540 5991648 -244696206 + L1ME LINE L1 5561 5681 -440 267 294 65 0 chr2 5991932 5992024 -244695830 + MIR SINE MIR 124 221 -41 230 258 32 0 chr2 5992848 5992910 -244694944 + CT-rich Low_complexity Low_complexity 1 64 0 465 34 0 0 chr2 5993376 5993435 -244694419 + (TG)n Simple_repeat Simple_repeat 1 59 0 1896 149 0 34 chr2 5993546 5993868 -244693986 + AluSx SINE Alu 1 311 -1 5914 213 51 19 chr2 5994759 5995161 -244692693 + L1MC1 LINE L1 4005 4393 -1940 1597 231 72 20 chr2 5995161 5995508 -244692346 - MLT1A1 LTR MaLR 0 365 1 5914 213 51 19 chr2 5995508 5996193 -244691661 + L1MC1 LINE L1 4393 5055 -1278 2012 131 34 0 chr2 5996193 5996484 -244691370 - AluSx SINE Alu -11 301 1 5914 213 51 19 chr2 5996484 5997670 -244690184 + L1MC1 LINE L1 5055 6333 0 337 281 75 50 chr2 5998002 5998162 -244689692 + MIR SINE MIR 87 250 -12 1604 378 25 5 chr2 5998167 5998535 -244689319 + THE1C LTR MaLR 1 375 0 258 338 45 8 chr2 5999024 5999157 -244688697 - MIR SINE MIR -74 188 51 320 243 117 10 chr2 5999844 5999947 -244687907 + MIR SINE MIR 30 143 -65 198 0 0 0 chr2 6000415 6000437 -244687417 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 198 250 0 0 chr2 6001878 6001922 -244685932 - L3b LINE CR1 -8 1575 1532 246 309 24 67 chr2 6001923 6002088 -244685766 + MER117 DNA MER1_type 2 159 -38 314 228 32 65 chr2 6002210 6002333 -244685521 - MLT1F1 LTR MaLR -6 561 443 281 266 101 15 chr2 6002329 6002512 -244685342 - MLT1H1 LTR MaLR -325 230 1 * 186 302 0 0 chr2 6003007 6003060 -244684794 - MIR3 SINE MIR -43 165 113 1231 111 6 18 chr2 6003554 6003725 -244684129 + AluSq SINE Alu 12 180 -133 1264 67 0 0 chr2 6003826 6003976 -244683878 - AluSq/x SINE Alu -162 150 1 325 371 51 31 chr2 6004447 6004800 -244683054 + L3 LINE CR1 666 1025 -552 250 333 0 46 chr2 6004858 6004966 -244682888 + L3 LINE CR1 1155 1257 -320 191 36 36 0 chr2 6005732 6005760 -244682094 + (TG)n Simple_repeat Simple_repeat 1 29 0 331 343 43 60 chr2 6006229 6006462 -244681392 + L3 LINE CR1 1141 1369 -208 241 244 0 0 chr2 6007015 6007069 -244680785 - MIR SINE MIR -84 124 71 232 299 13 13 chr2 6007339 6007416 -244680438 + MLT1E LTR MaLR 209 285 -308 185 290 93 28 chr2 6007464 6007571 -244680283 - MIR SINE MIR -63 145 32 311 276 11 0 chr2 6007911 6007998 -244679856 - MIR SINE MIR -168 94 7 25 51 0 0 chr2 6008563 6008602 -244679252 + AT_rich Low_complexity Low_complexity 1 39 0 454 321 63 66 chr2 6008883 6009279 -244678575 + L2 LINE L2 2850 3244 -28 2183 210 8 32 chr2 6010325 6010796 -244677058 + MLT1C LTR MaLR 8 467 0 1207 205 101 14 chr2 6012141 6012419 -244675435 + MER58B DNA MER1_type 36 337 -4 28 29 0 0 chr2 6012656 6012691 -244675163 + AT_rich Low_complexity Low_complexity 1 35 0 1118 30 8 8 chr2 6012791 6012922 -244674932 - AluY SINE Alu -180 131 1 273 326 56 41 chr2 6013892 6014088 -244673766 + MIR SINE MIR 35 233 -29 350 350 64 6 chr2 6014117 6014274 -244673580 - MIR SINE MIR -77 185 20 480 285 158 13 chr2 6014281 6014439 -244673415 - MER5A DNA MER1_type 0 189 9 223 93 0 74 chr2 6014535 6014589 -244673265 + (GGAGAA)n Simple_repeat Simple_repeat 2 51 0 208 315 56 11 chr2 6014960 6015049 -244672805 + MIR SINE MIR 118 210 -52 2047 213 115 14 chr2 6015049 6015552 -244672302 - MLT2B3 LTR ERVL 0 554 1 652 264 40 40 chr2 6015674 6015914 -244671940 - MIR SINE MIR -11 251 16 1946 133 96 37 chr2 6016497 6016851 -244671003 - THE1C LTR MaLR 0 375 1 1797 187 41 44 chr2 6016966 6017330 -244670524 + MLT1A1 LTR MaLR 3 365 0 225 241 24 60 chr2 6018316 6018399 -244669455 - MIR3 SINE MIR -11 197 118 260 250 80 10 chr2 6018449 6018549 -244669305 + MIR SINE MIR 81 187 -75 232 311 10 48 chr2 6018547 6018650 -244669204 + L2 LINE L2 3215 3313 0 * 206 306 106 12 chr2 6018706 6018791 -244669063 - MIR3 SINE MIR -102 106 14 372 271 37 0 chr2 6019893 6020000 -244667854 + MER94 DNA DNA 19 129 -5 317 125 0 83 chr2 6020277 6020349 -244667505 + L1PA16 LINE L1 6095 6160 -6 207 0 0 0 chr2 6020668 6020691 -244667163 + (TG)n Simple_repeat Simple_repeat 1 23 0 1959 135 26 53 chr2 6020992 6021369 -244666485 - THE1C LTR MaLR -8 367 1 1361 212 50 32 chr2 6021386 6021763 -244666091 + L1MC4 LINE L1 7044 7427 -615 787 215 10 40 chr2 6021757 6021957 -244665897 - L1MC4 LINE L1 -961 7081 6888 * 287 276 48 0 chr2 6022075 6022180 -244665674 - MIR3 SINE MIR -9 199 90 252 86 0 0 chr2 6022981 6023016 -244664838 + (T)n Simple_repeat Simple_repeat 1 35 0 2300 103 0 0 chr2 6023834 6024135 -244663719 + AluY SINE Alu 1 301 -10 2977 96 8 0 chr2 6024267 6024663 -244663191 - MLT2A2 LTR ERVL -53 400 2 216 318 95 84 chr2 6025226 6025405 -244662449 - L2 LINE L2 -36 3236 3056 369 323 43 59 chr2 6025628 6025890 -244661964 + MIR SINE MIR 9 261 -1 41 58 0 0 chr2 6025978 6026047 -244661807 + AT_rich Low_complexity Low_complexity 1 69 0 215 339 64 53 chr2 6026732 6026897 -244660957 - MIR SINE MIR -75 133 8 236 231 0 0 chr2 6026962 6027014 -244660840 + L2 LINE L2 3262 3313 0 210 37 0 0 chr2 6028251 6028278 -244659576 + (TA)n Simple_repeat Simple_repeat 1 27 0 243 132 0 0 chr2 6028293 6028346 -244659508 - LTR66 LTR ERVL -169 441 389 401 0 20 0 chr2 6028874 6028923 -244658931 + (TG)n Simple_repeat Simple_repeat 2 51 0 212 260 80 30 chr2 6029361 6029461 -244658393 + MIR3 SINE MIR 93 197 -11 * 223 231 215 31 chr2 6029457 6029587 -244658267 - MIR SINE MIR -4 258 105 189 0 0 0 chr2 6030505 6030526 -244657328 + (TAA)n Simple_repeat Simple_repeat 2 22 0 28 0 0 0 chr2 6031151 6031179 -244656675 + AT_rich Low_complexity Low_complexity 1 28 0 876 245 20 0 chr2 6031205 6031401 -244656453 + L1ME1 LINE L1 5480 5679 -487 1188 153 0 10 chr2 6031405 6031607 -244656247 + L1PBa LINE L1 1 200 -6663 * 2673 123 33 16 chr2 6031581 6032067 -244655787 + L1PBa LINE L1 599 1135 -5728 10335 96 66 6 chr2 6032083 6033688 -244654166 + L1PBa LINE L1 1297 2996 -3866 875 212 16 11 chr2 6033688 6033877 -244653977 - LTR1 LTR ERV1 -593 192 3 14674 174 45 54 chr2 6033879 6036994 -244650860 - HUERS-P2 LTR ERV1 0 3088 2 2601 199 109 66 chr2 6036995 6037786 -244650068 - LTR1B LTR ERV1 0 826 2 5749 175 25 9 chr2 6037787 6039422 -244648432 + L1PB1 LINE L1 4132 5791 -360 207 143 57 29 chr2 6039437 6039542 -244648312 + (TA)n Simple_repeat Simple_repeat 1 108 0 470 45 45 30 chr2 6039580 6039634 -244648220 - L1PB1 LINE L1 -302 5849 5792 207 0 0 0 chr2 6039634 6039657 -244648197 + (TG)n Simple_repeat Simple_repeat 1 23 0 470 45 45 30 chr2 6039657 6039669 -244648185 - L1PB1 LINE L1 -359 5792 5782 455 127 70 14 chr2 6039686 6039951 -244647903 + (TA)n Simple_repeat Simple_repeat 1 250 -425 2908 63 11 8 chr2 6039951 6040315 -244647539 + L1PB1 LINE L1 5782 6146 -5 455 127 70 14 chr2 6040315 6040326 -244647528 + (TA)n Simple_repeat Simple_repeat 250 675 0 1347 249 95 19 chr2 6040332 6040805 -244647049 + L1ME1 LINE L1 5654 6162 -4 900 122 23 0 chr2 6040825 6040956 -244646898 + AluSx SINE Alu 1 134 -179 402 151 0 0 chr2 6040956 6041029 -244646825 + (TA)n Simple_repeat Simple_repeat 1 73 0 1089 141 0 40 chr2 6041032 6041209 -244646645 + AluSx SINE Alu 127 296 -16 249 33 0 0 chr2 6041894 6041924 -244645930 + (CA)n Simple_repeat Simple_repeat 1 30 0 215 288 38 0 chr2 6042226 6042306 -244645548 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 287 291 50 64 chr2 6042952 6043093 -244644761 + L2 LINE L2 3134 3272 0 382 298 33 33 chr2 6043841 6043962 -244643892 - L2 LINE L2 -9 3304 3184 885 289 43 10 chr2 6044259 6044560 -244643294 + L2 LINE L2 1911 2221 -1093 356 306 20 14 chr2 6044579 6044726 -244643128 + L1MEc LINE L1 67 214 -6182 740 288 49 46 chr2 6045237 6045433 -244642421 + L1MEc LINE L1 658 852 -5353 2108 123 10 3 chr2 6045433 6045734 -244642120 + AluSq SINE Alu 1 303 -10 740 288 49 46 chr2 6045734 6046146 -244641708 + L1MEc LINE L1 852 1220 -4985 3686 138 57 7 chr2 6046179 6046794 -244641060 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 560 152 235 38 chr2 6046791 6046923 -244640931 - Tigger4(Zombi) DNA MER2_type -2571 160 3 * 213 167 21 21 chr2 6046923 6046971 -244640883 + (CA)n Simple_repeat Simple_repeat 1 48 0 666 278 91 53 chr2 6047074 6047215 -244640639 + L1MEc LINE L1 1506 1640 -4756 832 207 5 0 chr2 6047215 6047403 -244640451 + L1MD1 LINE L1 6054 6242 0 666 278 91 53 chr2 6047403 6047587 -244640267 + L1MEc LINE L1 1640 1815 -4581 2133 142 0 0 chr2 6047587 6047896 -244639958 + AluSx SINE Alu 1 309 -3 666 278 91 53 chr2 6047896 6048349 -244639505 + L1MEc LINE L1 1815 2315 -4081 3082 229 56 11 chr2 6048578 6049342 -244638512 + L1M4b LINE L1 555 1353 -5506 2232 108 0 0 chr2 6049346 6049634 -244638220 + AluSc SINE Alu 1 288 -21 213 241 0 0 chr2 6049636 6049690 -244638164 + (TA)n Simple_repeat Simple_repeat 1 54 0 291 117 83 0 chr2 6049691 6049751 -244638103 + L1M4b LINE L1 1357 1421 -5438 321 159 0 0 chr2 6049951 6050014 -244637840 + (TG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr2 6050889 6050917 -244636937 + AT_rich Low_complexity Low_complexity 1 28 0 197 377 85 31 chr2 6051101 6051231 -244636623 - MIR3 SINE MIR -6 202 66 3041 285 105 23 chr2 6052266 6052385 -244635469 + L1MB7 LINE L1 6 114 -6845 1868 148 65 0 chr2 6052385 6052676 -244635178 - AluSx SINE Alu -2 310 1 3041 285 105 23 chr2 6052676 6054777 -244633077 + L1MB7 LINE L1 114 2405 -4554 206 260 0 0 chr2 6054845 6054895 -244632959 + (TA)n Simple_repeat Simple_repeat 2 51 0 355 325 0 0 chr2 6054961 6055075 -244632779 - L1M4b LINE L1 -5344 1515 1402 2239 244 89 36 chr2 6055179 6055699 -244632155 + L1MB7 LINE L1 2560 3051 -3906 352 81 16 16 chr2 6055699 6055761 -244632093 + (TA)n Simple_repeat Simple_repeat 1 62 0 2239 244 89 36 chr2 6055761 6056660 -244631194 + L1MB7 LINE L1 3051 3999 -2958 1157 181 43 27 chr2 6056667 6056966 -244630888 + L1MA7 LINE L1 5988 6291 0 5193 229 77 26 chr2 6056995 6058370 -244629484 + L1MB7 LINE L1 4016 5319 -1676 234 0 0 0 chr2 6058370 6058396 -244629458 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 240 100 0 0 chr2 6058395 6058435 -244629419 + (CA)n Simple_repeat Simple_repeat 1 40 0 5193 229 77 26 chr2 6058396 6059772 -244628082 + L1MB7 LINE L1 5319 6868 -127 3696 60 9 0 chr2 6059772 6060236 -244627618 - L1PA8 LINE L1 -4 6168 5701 358 196 0 0 chr2 6060236 6060328 -244627526 + L1MB8 LINE L1 6072 6163 -15 2091 155 63 24 chr2 6060574 6060987 -244626867 + MSTB1 LTR MaLR 4 432 0 24 0 0 0 chr2 6061429 6061453 -244626401 + AT_rich Low_complexity Low_complexity 1 24 0 198 314 65 46 chr2 6061802 6061955 -244625899 + MIR SINE MIR 81 236 -26 289 297 203 16 chr2 6062375 6062681 -244625173 - MLT1J1 LTR MaLR -24 422 60 207 0 0 0 chr2 6062939 6062962 -244624892 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 6064555 6064579 -244623275 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 252 0 0 0 chr2 6064578 6064606 -244623248 + (CA)n Simple_repeat Simple_repeat 1 28 0 195 42 0 0 chr2 6064605 6064629 -244623225 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 23 0 0 0 chr2 6065211 6065234 -244622620 + AT_rich Low_complexity Low_complexity 1 23 0 2299 115 24 21 chr2 6066079 6066453 -244621401 + THE1C LTR MaLR 1 375 0 223 213 0 0 chr2 6068963 6069010 -244618844 + MER5B DNA MER1_type 130 176 -2 416 194 108 0 chr2 6069233 6069326 -244618528 + MER5A DNA MER1_type 4 106 -83 330 336 27 0 chr2 6069389 6069499 -244618355 + MER5B DNA MER1_type 1 113 -65 279 323 56 19 chr2 6072355 6072516 -244615338 + MIR SINE MIR 84 250 -12 * 769 318 25 8 chr2 6072460 6072705 -244615149 - MIR SINE MIR -6 256 8 1457 213 23 0 chr2 6073150 6073455 -244614399 - AluJo SINE Alu 0 312 1 261 375 83 0 chr2 6075553 6075673 -244612181 - L2 LINE L2 -1 3271 3142 521 305 46 6 chr2 6076301 6076475 -244611379 - MIR SINE MIR -16 246 66 366 263 37 26 chr2 6077268 6077458 -244610396 + LTR33A LTR ERVL 328 519 -4 1393 155 91 16 chr2 6077792 6078044 -244609810 - AluJb SINE Alu -16 296 26 351 278 0 0 chr2 6078683 6078755 -244609099 - MIR SINE MIR -92 116 45 671 258 42 24 chr2 6078848 6078910 -244608944 - MER58A DNA MER1_type -2203 217 158 2344 122 53 26 chr2 6078910 6079327 -244608527 - MSTA LTR MaLR 0 428 1 671 258 42 24 chr2 6079327 6079477 -244608377 - MER58A DNA MER1_type -2262 158 1 439 326 80 37 chr2 6079514 6079916 -244607938 - MLT1J LTR MaLR -57 454 36 191 111 0 0 chr2 6080176 6080203 -244607651 + MIR SINE MIR 118 144 -118 857 188 17 59 chr2 6081889 6082128 -244605726 + MSTB2 LTR MaLR 229 457 0 1094 197 55 108 chr2 6082174 6082555 -244605299 + MLT1A1 LTR MaLR 1 361 -4 253 364 29 29 chr2 6083266 6083406 -244604448 + MIR3 SINE MIR 16 155 -53 21 36 0 0 chr2 6083600 6083628 -244604226 + AT_rich Low_complexity Low_complexity 1 28 0 336 48 0 0 chr2 6083775 6083817 -244604037 + (GA)n Simple_repeat Simple_repeat 1 42 0 184 318 91 23 chr2 6086222 6086354 -244601500 - MIR SINE MIR -65 197 57 195 69 0 0 chr2 6087358 6087387 -244600467 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 203 316 93 14 chr2 6087514 6087653 -244600201 + L2 LINE L2 2672 2821 -493 31 44 0 0 chr2 6088330 6088375 -244599479 + AT_rich Low_complexity Low_complexity 1 45 0 359 318 25 30 chr2 6088992 6089126 -244598728 - L1ME LINE L1 -404 5717 5583 1949 189 18 10 chr2 6089126 6089513 -244598341 + MLT1B LTR MaLR 1 390 0 359 318 25 30 chr2 6089513 6089576 -244598278 - L1ME LINE L1 -538 5583 5521 1809 162 40 30 chr2 6090381 6090752 -244597102 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 6090784 6090819 -244597035 + AT_rich Low_complexity Low_complexity 1 35 0 206 382 35 18 chr2 6091002 6091172 -244596682 + L2 LINE L2 2828 3000 -272 318 318 96 36 chr2 6091207 6091487 -244596367 + HAL1b LINE L1 527 823 -525 1659 223 11 6 chr2 6091552 6091915 -244595939 + MLT1A1 LTR MaLR 1 365 0 258 294 16 16 chr2 6092307 6092433 -244595421 + (TA)n Simple_repeat Simple_repeat 2 127 0 294 277 47 84 chr2 6093435 6093648 -244594206 + MIR SINE MIR 8 212 -50 1602 165 92 9 chr2 6093767 6094083 -244593771 + MER2 DNA MER2_type 2 343 -1 26 0 0 0 chr2 6094634 6094660 -244593194 + AT_rich Low_complexity Low_complexity 1 26 0 238 269 222 9 chr2 6094801 6094909 -244592945 + MIR SINE MIR 48 178 -84 22 56 0 0 chr2 6094917 6094953 -244592901 + AT_rich Low_complexity Low_complexity 1 36 0 4453 132 1 12 chr2 6094953 6095673 -244592181 - L1PA13 LINE L1 -5 6158 5447 265 315 96 92 chr2 6095892 6096194 -244591660 - L2 LINE L2 -9 3304 2998 852 230 0 0 chr2 6096194 6096355 -244591499 + FRAM SINE Alu 1 161 -5 265 315 96 92 chr2 6096355 6096532 -244591322 - L2 LINE L2 -315 2998 2823 197 403 32 13 chr2 6096572 6096726 -244591128 - L2 LINE L2 -602 2712 2556 2152 130 0 3 chr2 6097331 6097639 -244590215 + AluSx SINE Alu 6 312 0 4989 177 25 6 chr2 6098533 6099425 -244588429 + MER49 LTR ERV1 8 916 -7 213 65 0 0 chr2 6100009 6100040 -244587814 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 353 162 0 14 chr2 6100610 6100684 -244587170 + GA-rich Low_complexity Low_complexity 4 76 0 365 255 10 10 chr2 6100917 6101015 -244586839 - MIR SINE MIR -118 144 47 212 281 88 44 chr2 6101639 6101753 -244586101 - MIR SINE MIR -74 188 70 21 0 0 0 chr2 6102235 6102256 -244585598 + AT_rich Low_complexity Low_complexity 1 21 0 1207 182 0 85 chr2 6102299 6102557 -244585297 + AluJo SINE Alu 1 236 -76 447 176 22 11 chr2 6102659 6102750 -244585104 + MSTC LTR MaLR 337 428 0 21 36 0 0 chr2 6104716 6104744 -244583110 + AT_rich Low_complexity Low_complexity 1 28 0 320 290 8 40 chr2 6104769 6104893 -244582961 - MIR SINE MIR -109 153 34 214 292 42 25 chr2 6107265 6107385 -244580469 + MIR SINE MIR 21 142 -120 1668 235 15 50 chr2 6108030 6108553 -244579301 + MLT1D LTR MaLR 1 505 0 22 0 0 0 chr2 6108690 6108712 -244579142 + AT_rich Low_complexity Low_complexity 1 22 0 272 97 42 14 chr2 6109278 6109350 -244578504 + (TG)n Simple_repeat Simple_repeat 1 74 0 344 196 27 20 chr2 6109376 6109524 -244578330 + (TG)n Simple_repeat Simple_repeat 1 149 0 225 353 17 8 chr2 6112548 6112667 -244575187 - MER5B DNA MER1_type -5 173 54 30 0 0 0 chr2 6112690 6112720 -244575134 + AT_rich Low_complexity Low_complexity 1 30 0 653 224 22 49 chr2 6112781 6112964 -244574890 - MER58C DNA MER1_type 0 215 38 231 291 13 0 chr2 6113080 6113159 -244574695 + MIR3 SINE MIR 124 203 -5 257 217 87 0 chr2 6113317 6113386 -244574468 + MIR SINE MIR 118 192 -70 410 264 47 27 chr2 6113440 6113588 -244574266 + MIR SINE MIR 65 215 -47 253 318 76 23 chr2 6114765 6114897 -244572957 - MIR SINE MIR -119 143 5 389 183 20 33 chr2 6116799 6116952 -244570902 + CT-rich Low_complexity Low_complexity 3 153 0 1492 127 18 9 chr2 6116954 6117175 -244570679 - AluSc SINE Alu -3 306 81 1789 162 6 34 chr2 6117175 6117496 -244570358 - AluJb SINE Alu 0 312 1 300 296 57 0 chr2 6117542 6117630 -244570224 - MIR SINE MIR -79 183 91 257 254 167 7 chr2 6117654 6117792 -244570062 - MIR SINE MIR -3 259 100 1768 154 89 17 chr2 6119050 6119400 -244568454 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr2 6119541 6119565 -244568289 + AT_rich Low_complexity Low_complexity 1 24 0 448 270 68 0 chr2 6119712 6119860 -244567994 + MIR SINE MIR 4 161 -101 1132 215 99 52 chr2 6119893 6120477 -244567377 - LTR48B LTR ERV1 0 644 1 2040 179 82 131 chr2 6120532 6121293 -244566561 - LTR8A LTR ERV1 -4 723 1 2313 161 67 7 chr2 6122010 6122414 -244565440 - MSTA LTR MaLR 0 428 1 2129 195 20 66 chr2 6122668 6123143 -244564711 + MLT2B1 LTR ERVL 1 496 -24 512 43 29 0 chr2 6123143 6123213 -244564641 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 2129 195 20 66 chr2 6123213 6123229 -244564625 + MLT2B1 LTR ERVL 496 468 -52 2424 123 22 6 chr2 6123229 6123587 -244564267 - THE1B LTR MaLR 0 364 1 2129 195 20 66 chr2 6123587 6123637 -244564217 + MLT2B1 LTR ERVL 467 518 -2 1934 152 22 26 chr2 6124570 6124924 -244562930 + MLT2A2 LTR ERVL 3 309 -144 1170 133 0 6 chr2 6125014 6125195 -244562659 + MLT2A2 LTR ERVL 274 453 0 2427 50 0 3 chr2 6126182 6126488 -244561366 + AluY SINE Alu 1 305 0 419 322 94 59 chr2 6126742 6127198 -244560656 - MLT1K LTR MaLR 0 588 117 2271 96 0 3 chr2 6128672 6128965 -244558889 - AluY SINE Alu -19 292 1 1923 67 8 4 chr2 6129602 6129855 -244557999 - L1PA7 LINE L1 0 6154 5901 267 264 33 0 chr2 6129877 6129968 -244557886 - MER5A DNA MER1_type -95 94 1 246 62 0 0 chr2 6130115 6130147 -244557707 + (A)n Simple_repeat Simple_repeat 1 32 0 376 200 109 0 chr2 6131328 6131438 -244556416 - MER20 DNA MER1_type -95 124 3 1295 132 80 0 chr2 6131444 6131657 -244556197 + MER30 DNA MER1_type 1 230 0 216 194 45 0 chr2 6131750 6131884 -244555970 + (TG)n Simple_repeat Simple_repeat 2 141 0 218 191 23 30 chr2 6131971 6132102 -244555752 + (TG)n Simple_repeat Simple_repeat 2 131 0 541 150 22 28 chr2 6132113 6132293 -244555561 + (TG)n Simple_repeat Simple_repeat 1 179 0 431 204 39 6 chr2 6132315 6132632 -244555222 + (TG)n Simple_repeat Simple_repeat 1 327 0 234 62 0 0 chr2 6133537 6133569 -244554285 + (TAA)n Simple_repeat Simple_repeat 1 32 0 201 156 0 0 chr2 6135074 6135106 -244552748 + CT-rich Low_complexity Low_complexity 2 33 0 33 0 0 0 chr2 6135545 6135578 -244552276 + AT_rich Low_complexity Low_complexity 1 33 0 440 281 31 40 chr2 6137675 6137920 -244549934 - MIR SINE MIR -15 247 4 2255 101 3 0 chr2 6138162 6138449 -244549405 + AluSc SINE Alu 1 288 -21 25 51 0 0 chr2 6139262 6139301 -244548553 + AT_rich Low_complexity Low_complexity 1 39 0 1958 133 3 7 chr2 6139351 6139636 -244548218 + MER1B DNA MER1_type 43 326 -13 3617 255 115 52 chr2 6139687 6141786 -244546068 - Charlie7 DNA MER1_type -139 2473 243 1845 185 25 33 chr2 6142140 6142507 -244545347 - MLT1A1 LTR MaLR 0 365 2 263 361 31 0 chr2 6143016 6143146 -244544708 - MIR SINE MIR -50 212 79 229 320 82 0 chr2 6143762 6143884 -244543970 + MIR SINE MIR 76 207 -55 183 190 40 20 chr2 6144518 6144618 -244543236 + (CA)n Simple_repeat Simple_repeat 1 102 0 386 218 45 0 chr2 6144638 6144794 -244543060 + (CA)n Simple_repeat Simple_repeat 1 163 0 185 158 132 0 chr2 6150565 6150603 -244537251 + MIR SINE MIR 81 123 -85 2387 134 8 21 chr2 6152493 6152873 -244534981 + THE1C LTR MaLR 1 375 0 205 284 142 45 chr2 6154685 6154819 -244533035 + L2 LINE L2 3166 3312 -1 228 325 13 0 chr2 6155795 6155872 -244531982 - MIR SINE MIR -108 154 77 199 220 7 50 chr2 6157034 6157175 -244530679 + GA-rich Low_complexity Low_complexity 2 136 0 243 285 146 8 chr2 6157692 6157815 -244530039 + L2 LINE L2 3132 3271 -1 229 301 12 0 chr2 6157984 6158067 -244529787 + MIR SINE MIR 111 194 -68 748 247 57 10 chr2 6158105 6158299 -244529555 - MLT1B LTR MaLR 0 467 265 329 281 9 9 chr2 6158299 6158413 -244529441 - MIR SINE MIR -132 130 17 794 196 87 4 chr2 6158484 6158709 -244529145 - MLT1B LTR MaLR -186 204 9 625 289 21 4 chr2 6158746 6158981 -244528873 + MIR SINE MIR 20 258 -4 352 242 77 0 chr2 6160577 6160668 -244527186 + MER63 DNA MER1_type 1 724 -112 567 203 99 81 chr2 6161067 6161289 -244526565 + HAL1 LINE L1 1 226 -2281 818 170 12 12 chr2 6161772 6162022 -244525832 + GA-rich Low_complexity Low_complexity 1 250 0 357 24 0 0 chr2 6162024 6162066 -244525788 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 825 241 137 52 chr2 6162067 6162491 -244525363 - MLT1C LTR MaLR -4 463 4 237 259 12 25 chr2 6162494 6162575 -244525279 + GA-rich Low_complexity Low_complexity 3 82 0 1843 219 73 7 chr2 6162685 6163137 -244524717 + L1MB2 LINE L1 5686 6167 -4 406 83 0 17 chr2 6163439 6163499 -244524355 - L1PA13 LINE L1 -846 5458 5400 5025 90 1 13 chr2 6163499 6164197 -244523657 + L1PA13 LINE L1 5470 6161 -2 198 260 26 52 chr2 6164963 6165040 -244522814 - MIR3 SINE MIR -39 169 95 210 37 0 0 chr2 6165320 6165347 -244522507 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 209 270 126 50 chr2 6166066 6166225 -244521629 - MIR3 SINE MIR -22 186 16 226 304 194 42 chr2 6166728 6166919 -244520935 + MIR SINE MIR 30 249 -13 399 306 136 71 chr2 6167412 6167978 -244519876 + L1MC4a LINE L1 5265 5867 -1941 1868 81 20 6 chr2 6168653 6169043 -244518811 - MLT2A2 LTR ERVL 0 453 1 515 294 0 0 chr2 6170128 6170291 -244517563 + MIR SINE MIR 95 257 -5 219 333 28 28 chr2 6170313 6170421 -244517433 - MIR SINE MIR -64 144 37 483 332 62 7 chr2 6170730 6171004 -244516850 - L1ME LINE L1 -307 5814 5526 661 123 0 25 chr2 6171154 6171276 -244516578 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 199 274 32 0 chr2 6171314 6171376 -244516478 + MIR SINE MIR 159 222 -40 191 343 81 6 chr2 6171876 6172048 -244515806 + L2 LINE L2 2981 3165 -148 2025 130 33 20 chr2 6172151 6172452 -244515402 - AluSq SINE Alu -8 305 1 2586 71 21 0 chr2 6172527 6172865 -244514989 + L1P3 LINE L1 5361 5705 -467 219 319 8 50 chr2 6172866 6172985 -244514869 + L2 LINE L2 3180 3293 -20 327 301 64 13 chr2 6174076 6174232 -244513622 - MIR SINE MIR -62 200 37 450 83 0 42 chr2 6174300 6174372 -244513482 + MADE1 DNA Mariner 10 78 -2 346 252 48 29 chr2 6174374 6174477 -244513377 - L2 LINE L2 -36 3277 3173 196 320 39 39 chr2 6174785 6174963 -244512891 - L2 LINE L2 -578 2736 2559 295 233 63 47 chr2 6175262 6175348 -244512506 - MIR3 SINE MIR -53 155 68 28 0 0 0 chr2 6175416 6175444 -244512410 + AT_rich Low_complexity Low_complexity 1 28 0 299 333 9 0 chr2 6176306 6176411 -244511443 + MIR3 SINE MIR 67 172 -36 2195 112 0 3 chr2 6176928 6177223 -244510631 + AluSc SINE Alu 1 294 -15 2332 95 0 20 chr2 6177893 6178198 -244509656 + AluSg SINE Alu 1 299 -11 192 252 9 17 chr2 6178516 6178631 -244509223 + GA-rich Low_complexity Low_complexity 4 117 0 401 205 53 76 chr2 6178635 6178806 -244509048 + HAL1 LINE L1 1011 1177 -1330 819 284 192 15 chr2 6178838 6179296 -244508558 + L1ME1 LINE L1 36 574 -5822 1225 265 86 52 chr2 6179314 6180465 -244507389 + L1ME1 LINE L1 1091 6230 -5 337 159 63 0 chr2 6181118 6181181 -244506673 - MLT1A2 LTR MaLR 0 390 324 586 228 124 0 chr2 6181191 6181336 -244506518 + FRAM SINE Alu 4 166 0 562 250 6 6 chr2 6181336 6181516 -244506338 + GA-rich Low_complexity Low_complexity 1 180 0 519 227 4 9 chr2 6181539 6181687 -244506167 - MLT1A2 LTR MaLR -56 372 192 750 219 21 42 chr2 6181737 6181929 -244505925 - MLT1A2 LTR MaLR -186 188 1 392 269 85 28 chr2 6182025 6182290 -244505564 - L1ME LINE L1 -4685 1576 1107 1594 223 77 12 chr2 6182305 6182736 -244505118 - MLT1C LTR MaLR 0 467 1 2111 273 82 26 chr2 6182736 6183889 -244503965 - L1ME LINE L1 -4846 1234 14 568 309 73 25 chr2 6184540 6184932 -244502922 - MLT1J LTR MaLR -45 466 13 279 0 0 0 chr2 6185289 6185320 -244502534 + (CA)n Simple_repeat Simple_repeat 2 32 0 359 318 0 0 chr2 6185321 6185428 -244502426 - MER5B DNA MER1_type -71 107 1 1027 142 0 0 chr2 6185832 6185987 -244501867 - AluSx SINE Alu -1 311 157 585 111 0 0 chr2 6185987 6186068 -244501786 - AluSx SINE Alu -231 82 2 1962 146 7 0 chr2 6186100 6186403 -244501451 + AluJb SINE Alu 1 305 0 313 176 110 11 chr2 6186487 6186578 -244501276 - MLT1J LTR MaLR -38 473 374 32544 218 19 16 chr2 6186613 6195039 -244492815 - HUERS-P3 LTR ERV1 -224 8695 259 484 138 11 53 chr2 6195043 6195137 -244492717 - HUERS-P3 LTR ERV1 -6905 91 2 4856 136 44 3 chr2 6195155 6195914 -244491940 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6196959 6197002 -244490852 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6198413 6198575 -244489279 - MIR SINE MIR -2 260 92 591 318 23 9 chr2 6198747 6198964 -244488890 + MIR SINE MIR 5 224 -38 304 357 84 0 chr2 6199158 6199301 -244488553 + MIR SINE MIR 20 174 -88 214 302 83 0 chr2 6199399 6199495 -244488359 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6200058 6200121 -244487733 + AT_rich Low_complexity Low_complexity 1 63 0 2271 112 0 0 chr2 6201203 6201499 -244486355 - AluSx SINE Alu -16 296 1 2243 54 0 0 chr2 6201908 6202168 -244485686 + AluY SINE Alu 39 298 -13 260 270 74 61 chr2 6203042 6203205 -244484649 - MIR SINE MIR -59 203 39 1625 147 120 78 chr2 6203294 6203341 -244484513 + MSTA LTR MaLR 3 47 -381 610 88 0 0 chr2 6203341 6203421 -244484433 - MADE1 DNA Mariner 0 80 1 1625 147 120 78 chr2 6203421 6203782 -244484072 + MSTA LTR MaLR 47 428 0 223 297 20 68 chr2 6203941 6204089 -244483765 + L2 LINE L2 2560 2700 -614 810 289 31 33 chr2 6204223 6204794 -244483060 + L1ME3A LINE L1 5458 6157 -13 327 295 29 7 chr2 6205103 6205242 -244482612 - L1ME LINE L1 -351 5811 5670 1499 162 63 36 chr2 6205564 6205867 -244481987 - AluJo SINE Alu -1 311 1 2214 65 7 4 chr2 6205875 6206150 -244481704 - AluY SINE Alu -1 310 35 451 332 53 66 chr2 6206172 6206709 -244481145 + L2 LINE L2 2698 3241 -72 2251 140 79 15 chr2 6206709 6207051 -244480803 + THE1B LTR MaLR 1 364 0 12522 89 11 1 chr2 6207051 6208614 -244479240 + THE1B-int LTR MaLR 1 1579 -1 2368 117 73 15 chr2 6208617 6208959 -244478895 + THE1B LTR MaLR 3 364 0 451 332 53 66 chr2 6208959 6209037 -244478817 + L2 LINE L2 3242 3307 -6 280 157 88 69 chr2 6209082 6209184 -244478670 + MIR SINE MIR 60 163 -99 324 48 0 0 chr2 6209343 6209385 -244478469 + (CA)n Simple_repeat Simple_repeat 2 43 0 409 283 108 42 chr2 6210452 6210692 -244477162 - MIR SINE MIR 0 262 7 355 323 137 50 chr2 6211230 6211611 -244476243 + L2 LINE L2 2834 3247 -25 661 284 85 21 chr2 6212375 6212611 -244475243 - MIR SINE MIR -11 251 1 180 375 39 48 chr2 6212803 6212907 -244474947 - MIR SINE MIR -87 121 19 322 291 151 71 chr2 6213414 6214022 -244473832 - L1M2 LINE L1 -5480 1369 713 550 265 110 82 chr2 6214752 6215242 -244472612 + Tigger8 DNA MER2_type 63 566 -100 1784 203 12 50 chr2 6215419 6215823 -244472031 - MLT1B LTR MaLR 0 390 2 393 261 130 52 chr2 6216443 6216766 -244471088 + L1M3 LINE L1 3103 3444 -2702 615 314 51 46 chr2 6217203 6217595 -244470259 + MER68 LTR ERV1 156 549 -13 180 111 0 0 chr2 6217600 6217627 -244470227 + (CA)n Simple_repeat Simple_repeat 1 27 0 500 230 100 53 chr2 6217745 6217994 -244469860 + L1M3 LINE L1 5183 5440 -728 2545 188 46 0 chr2 6218022 6218475 -244469379 + MER101 LTR ERV1 1 474 0 1948 174 43 57 chr2 6219646 6220142 -244467712 + MER31-int LTR ERV1 815 3120 -3211 567 270 56 30 chr2 6220073 6220343 -244467511 + LTR57-int LTR ERVL 1234 1510 -3833 * 473 263 71 25 chr2 6220385 6220583 -244467271 + MER31-int LTR ERV1 1711 1917 -3019 1223 188 32 73 chr2 6220671 6221177 -244466677 + MER31-int LTR ERV1 2052 3835 -2428 901 143 20 51 chr2 6221321 6221517 -244466337 + MER31-int LTR ERV1 3541 3730 -2868 1288 201 98 81 chr2 6221597 6222177 -244465677 + MER31-int LTR ERV1 3287 3501 -1514 2732 150 11 23 chr2 6222177 6222610 -244465244 + MSTA LTR MaLR 1 428 0 1288 201 98 81 chr2 6222610 6223197 -244464657 + MER31-int LTR ERV1 3501 4077 -938 262 169 56 61 chr2 6223218 6223366 -244464488 + MER31-int LTR ERV1 5200 5397 -934 534 229 21 21 chr2 6223375 6223519 -244464335 + MER31-int LTR ERV1 4259 4402 -534 381 305 71 38 chr2 6224990 6225202 -244462652 - MIR SINE MIR -6 256 35 942 260 66 3 chr2 6227122 6227410 -244460444 - L1ME3A LINE L1 -2 6168 5863 204 310 150 0 chr2 6227442 6227542 -244460312 + L2 LINE L2 2541 2655 -659 204 315 14 27 chr2 6227988 6228061 -244459793 + L2 LINE L2 3201 3272 0 330 275 62 83 chr2 6228091 6228283 -244459571 + MIR SINE MIR 19 204 -58 30 45 0 0 chr2 6228298 6228342 -244459512 + AT_rich Low_complexity Low_complexity 1 44 0 4176 113 28 2 chr2 6228457 6229022 -244458832 - LTR19B LTR ERV1 0 580 1 53 0 0 0 chr2 6229051 6229104 -244458750 + AT_rich Low_complexity Low_complexity 1 53 0 267 224 24 88 chr2 6229519 6229644 -244458210 + MER94 DNA DNA 1 117 -17 331 331 63 0 chr2 6229684 6229826 -244458028 + MIR SINE MIR 46 196 -66 340 294 133 45 chr2 6230208 6230494 -244457360 + HAL1 LINE L1 593 903 -1604 1228 275 144 29 chr2 6230495 6231243 -244456611 + HAL1 LINE L1 928 1761 -746 253 141 109 43 chr2 6231335 6231427 -244456427 + LTR33A LTR ERVL 360 457 -66 231 316 59 59 chr2 6232104 6232240 -244455614 + MER5B DNA MER1_type 43 178 0 23 54 0 0 chr2 6233117 6233154 -244454700 + AT_rich Low_complexity Low_complexity 1 37 0 750 316 56 22 chr2 6233269 6233592 -244454262 - MER68 LTR ERV1 0 562 229 202 331 8 58 chr2 6236258 6236379 -244451475 - L2 LINE L2 -223 3049 2935 22 56 0 0 chr2 6239344 6239380 -244448474 + AT_rich Low_complexity Low_complexity 1 36 0 293 305 102 11 chr2 6239546 6239733 -244448121 + L1ME LINE L1 5518 5721 -400 2390 75 3 0 chr2 6239735 6240059 -244447795 + AluY SINE Alu 1 311 0 22 0 0 0 chr2 6240622 6240644 -244447210 + AT_rich Low_complexity Low_complexity 1 22 0 197 306 124 16 chr2 6240675 6240796 -244447058 - MIR SINE MIR -10 252 119 394 197 271 0 chr2 6240883 6241005 -244446849 - MER5A DNA MER1_type -7 182 28 1143 252 72 6 chr2 6241049 6241367 -244446487 + MER58B DNA MER1_type 2 340 -1 23 33 0 0 chr2 6241971 6242001 -244445853 + AT_rich Low_complexity Low_complexity 1 30 0 1387 188 90 10 chr2 6242708 6242996 -244444858 - AluJb SINE Alu -1 311 1 205 156 0 0 chr2 6243560 6243592 -244444262 + (CATG)n Simple_repeat Simple_repeat 3 34 0 2211 99 10 0 chr2 6245972 6246264 -244441590 + AluSg SINE Alu 6 300 -10 186 71 0 0 chr2 6246531 6246559 -244441295 + (CCA)n Simple_repeat Simple_repeat 2 29 0 206 196 18 18 chr2 6247019 6247075 -244440779 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 20123 104 6 47 chr2 6247075 6252759 -244435095 - L1PA7 LINE L1 -12 6142 834 2234 129 0 0 chr2 6252759 6253069 -244434785 - AluSg SINE Alu 0 310 1 20123 104 6 47 chr2 6253069 6253860 -244433994 - L1PA7 LINE L1 -5320 834 12 310 230 111 0 chr2 6253983 6254118 -244433736 - L1ME4a LINE L1 0 6121 5972 495 0 0 0 chr2 6254391 6254446 -244433408 + (CA)n Simple_repeat Simple_repeat 2 56 0 1300 234 101 3 chr2 6254795 6255132 -244432722 - MLT1A2 LTR MaLR -4 370 1 198 187 103 14 chr2 6255816 6255881 -244431973 + MIR SINE MIR 82 214 -48 235 433 55 16 chr2 6256151 6256278 -244431576 - L2 LINE L2 -18 3254 3123 2443 117 6 6 chr2 6256463 6256813 -244431041 + L1PB1 LINE L1 5801 6150 -1 281 328 41 16 chr2 6257821 6257943 -244429911 - MIR SINE MIR -34 228 104 297 0 0 0 chr2 6258602 6258635 -244429219 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 269 13 0 chr2 6259038 6259116 -244428738 - LTR16A LTR ERVL 0 450 372 298 210 25 25 chr2 6259819 6259900 -244427954 - MLT1J1 LTR MaLR -2 444 364 255 367 0 0 chr2 6260372 6260451 -244427403 + MIR3 SINE MIR 109 187 -21 252 313 111 0 chr2 6260523 6260622 -244427232 - L2 LINE L2 -1 3271 3162 2809 143 22 13 chr2 6260772 6260860 -244426994 - MLT1C LTR MaLR 0 467 381 2475 157 80 46 chr2 6260860 6260900 -244426954 - MLT2B2 LTR ERVL 0 515 478 415 32 16 16 chr2 6260900 6260962 -244426892 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 2475 157 80 46 chr2 6260962 6261419 -244426435 - MLT2B2 LTR ERVL -37 478 1 2809 143 22 13 chr2 6261419 6261779 -244426075 - MLT1C LTR MaLR -86 381 15 2529 110 42 14 chr2 6262005 6262359 -244425495 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 6262675 6262696 -244425158 + AT_rich Low_complexity Low_complexity 1 21 0 2405 83 6 3 chr2 6262771 6263083 -244424771 - AluSp SINE Alu 0 313 1 197 194 0 0 chr2 6263516 6263552 -244424302 - MIR SINE MIR -9 253 218 810 238 0 0 chr2 6264551 6264719 -244423135 - AluJb SINE Alu -14 298 131 412 271 142 7 chr2 6264720 6264875 -244422979 - MIR SINE MIR -69 193 18 34 84 0 0 chr2 6265558 6265641 -244422213 + GC_rich Low_complexity Low_complexity 1 83 0 22 70 0 0 chr2 6265748 6265791 -244422063 + GC_rich Low_complexity Low_complexity 1 43 0 1507 172 46 14 chr2 6266048 6266333 -244421521 + AluJb SINE Alu 1 294 -18 306 0 0 0 chr2 6268596 6268630 -244419224 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 379 277 13 43 chr2 6269487 6269572 -244418282 + L1ME LINE L1 5510 5565 -556 1902 145 35 0 chr2 6269572 6269861 -244417993 - AluSx SINE Alu -13 299 1 379 277 13 43 chr2 6269861 6269932 -244417922 + L1ME LINE L1 5565 5637 -484 2330 217 39 41 chr2 6269961 6270621 -244417233 + L1M4c LINE L1 1238 1896 -4488 1535 103 0 0 chr2 6270627 6270821 -244417033 + AluSq SINE Alu 1 194 -119 22 0 0 0 chr2 6271598 6271620 -244416234 + AT_rich Low_complexity Low_complexity 1 22 0 2662 34 0 0 chr2 6271658 6271954 -244415900 - AluY SINE Alu -15 296 1 443 100 0 133 chr2 6272520 6272610 -244415244 + AluSg/x SINE Alu 218 295 -17 421 197 174 76 chr2 6273710 6273842 -244414012 - MER5A DNA MER1_type -32 157 13 221 314 128 0 chr2 6274181 6274267 -244413587 - MIR SINE MIR -64 144 48 3321 145 41 38 chr2 6274427 6274940 -244412914 - L1MB2 LINE L1 -270 5901 5384 2349 99 3 0 chr2 6274940 6275242 -244412612 - AluSg SINE Alu -7 303 1 3321 145 41 38 chr2 6275242 6275368 -244412486 - L1MB2 LINE L1 -787 5384 5260 835 172 90 0 chr2 6275368 6275513 -244412341 - AluJb SINE Alu -9 303 146 1658 158 0 28 chr2 6275520 6275805 -244412049 - AluJb SINE Alu -23 289 13 923 239 18 5 chr2 6275809 6276031 -244411823 - L1MB2 LINE L1 -871 5275 5051 1447 68 16 5 chr2 6276373 6276564 -244411290 + AluY SINE Alu 103 295 -16 1547 180 34 24 chr2 6277190 6277485 -244410369 + AluJo SINE Alu 1 298 -14 897 265 32 13 chr2 6277488 6277797 -244410057 + L1M4c LINE L1 2445 2759 -3623 1265 147 44 5 chr2 6278425 6278629 -244409225 + AluJb SINE Alu 1 212 -100 2228 112 3 0 chr2 6278629 6278925 -244408929 - AluSx SINE Alu -15 297 1 2107 125 3 3 chr2 6279544 6279841 -244408013 - AluSx SINE Alu -15 297 1 1246 204 91 18 chr2 6280484 6280759 -244407095 - AluJb SINE Alu -17 295 1 2109 86 47 0 chr2 6280898 6281176 -244406678 - AluSq SINE Alu -22 291 1 24 0 0 0 chr2 6281605 6281629 -244406225 + AT_rich Low_complexity Low_complexity 1 24 0 2144 96 20 20 chr2 6281931 6282232 -244405622 + AluSc SINE Alu 1 301 -8 1083 165 0 0 chr2 6282233 6282403 -244405451 + AluSg/x SINE Alu 135 304 -8 247 237 85 0 chr2 6282883 6282957 -244404897 + MLT1G LTR MaLR 223 311 -244 677 307 158 49 chr2 6283462 6283976 -244403878 + L3 LINE CR1 910 1479 -98 185 277 0 46 chr2 6284038 6284103 -244403751 + L3b LINE CR1 1522 1583 0 236 169 135 34 chr2 6284729 6284818 -244403036 - L1PA11 LINE L1 0 6174 6077 2066 197 163 27 chr2 6284820 6284922 -244402932 - Charlie1 DNA MER1_type -353 2408 2321 2323 103 3 6 chr2 6284922 6285234 -244402620 - AluSx SINE Alu -1 311 1 2066 197 163 27 chr2 6285234 6285426 -244402428 - Charlie1 DNA MER1_type -440 2321 2157 2150 140 3 3 chr2 6285426 6285733 -244402121 - AluSx SINE Alu -5 307 1 2066 197 163 27 chr2 6285733 6285932 -244401922 - Charlie1 DNA MER1_type -604 2157 1987 2073 122 10 16 chr2 6285932 6286243 -244401611 - AluSx SINE Alu -3 309 1 2066 197 163 27 chr2 6286243 6286421 -244401433 - Charlie1 DNA MER1_type -774 1987 1643 505 103 0 51 chr2 6286743 6286821 -244401033 - AluJo SINE Alu -17 295 222 771 166 0 58 chr2 6286891 6287030 -244400824 + FLAM_C SINE Alu 1 131 -2 2288 110 0 3 chr2 6287218 6287528 -244400326 - AluSc SINE Alu 0 309 1 1171 150 87 5 chr2 6287546 6287753 -244400101 - AluJo SINE Alu -88 224 1 259 154 0 0 chr2 6288296 6288335 -244399519 - Alu SINE Alu -261 39 1 314 262 267 11 chr2 6288570 6288748 -244399106 + MIR SINE MIR 4 228 -34 794 250 65 22 chr2 6288800 6289032 -244398822 + MIR SINE MIR 20 261 -1 867 173 0 0 chr2 6289121 6289254 -244398600 + FLAM_C SINE Alu 1 133 0 2230 95 3 0 chr2 6290606 6290891 -244396963 - AluSx SINE Alu -26 286 1 530 309 87 17 chr2 6291033 6291263 -244396591 + MIR SINE MIR 14 259 -3 207 282 42 0 chr2 6291411 6291482 -244396372 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 2263 118 0 0 chr2 6291858 6292164 -244395690 - AluSx SINE Alu -6 306 1 296 215 108 46 chr2 6294321 6294451 -244393403 + MIR SINE MIR 88 225 -37 2153 116 10 0 chr2 6294617 6294911 -244392943 - AluSg SINE Alu -13 297 1 40 67 0 0 chr2 6295002 6295077 -244392777 + AT_rich Low_complexity Low_complexity 1 75 0 2206 123 3 0 chr2 6295992 6296300 -244391554 - AluSx SINE Alu -3 309 1 192 97 0 0 chr2 6296860 6296891 -244390963 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2357 97 0 0 chr2 6296902 6297201 -244390653 - AluSg SINE Alu -11 299 1 1345 148 145 28 chr2 6297940 6298264 -244389590 + L1MB5 LINE L1 5813 6174 0 248 252 84 37 chr2 6298425 6298532 -244389322 - L2 LINE L2 -862 2452 2341 408 214 143 9 chr2 6298714 6298826 -244389028 - MER94 DNA DNA -1 133 7 206 319 0 14 chr2 6299054 6299123 -244388731 - L3 LINE CR1 -1 1576 1509 23 0 0 0 chr2 6300091 6300114 -244387740 + AT_rich Low_complexity Low_complexity 1 23 0 43 20 0 0 chr2 6300589 6300639 -244387215 + AT_rich Low_complexity Low_complexity 1 50 0 2505 86 0 0 chr2 6302126 6302439 -244385415 + AluSq SINE Alu 1 313 0 755 289 50 11 chr2 6302452 6302732 -244385122 + HAL1 LINE L1 1637 1927 -580 513 281 105 4 chr2 6302968 6303196 -244384658 + HAL1 LINE L1 2050 2300 -207 25 0 0 0 chr2 6303970 6303995 -244383859 + AT_rich Low_complexity Low_complexity 1 25 0 2479 84 0 3 chr2 6304489 6304799 -244383055 + AluY SINE Alu 1 309 -2 2099 100 3 17 chr2 6305804 6306093 -244381761 - AluSg SINE Alu -23 287 3 1233 154 43 39 chr2 6306159 6306393 -244381461 - AluJo SINE Alu -23 289 55 230 161 0 54 chr2 6307281 6307337 -244380517 - MER5B DNA MER1_type 0 178 126 2106 136 10 3 chr2 6307346 6307656 -244380198 + AluSx SINE Alu 1 312 0 564 242 62 36 chr2 6308250 6308444 -244379410 + MIR SINE MIR 63 261 -1 182 36 0 36 chr2 6309854 6309882 -244377972 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 2526 30 40 0 chr2 6310488 6310784 -244377070 + AluY SINE Alu 1 308 -3 253 281 92 30 chr2 6311421 6311585 -244376269 - L2 LINE L2 -467 2847 2674 207 333 10 30 chr2 6312874 6312973 -244374881 + MIR3 SINE MIR 78 174 -34 224 331 37 22 chr2 6313449 6313585 -244374269 - MIR SINE MIR -77 185 48 204 307 18 36 chr2 6313695 6313861 -244373993 - L2 LINE L2 -167 3105 2943 2527 77 0 0 chr2 6314619 6314930 -244372924 - AluY SINE Alu 0 311 1 718 223 99 21 chr2 6317636 6317869 -244369985 - MLT1C LTR MaLR -213 254 4 180 77 0 0 chr2 6317877 6317903 -244369951 + (CA)n Simple_repeat Simple_repeat 1 26 0 339 256 116 43 chr2 6317971 6318227 -244369627 - MLT1L LTR MaLR -7 608 235 276 246 25 68 chr2 6318600 6318718 -244369136 + L2 LINE L2 3156 3268 -4 1148 196 107 0 chr2 6319607 6319877 -244367977 + MER33 DNA MER1_type 5 303 -21 21 36 0 0 chr2 6321497 6321525 -244366329 + AT_rich Low_complexity Low_complexity 1 28 0 256 176 14 14 chr2 6322530 6322604 -244365250 + (TA)n Simple_repeat Simple_repeat 1 74 0 1942 163 0 7 chr2 6322605 6322900 -244364954 - AluJb SINE Alu -19 293 1 2189 247 40 16 chr2 6323687 6324420 -244363434 - L1M4 LINE L1 -3250 2896 2147 22 0 0 0 chr2 6325680 6325702 -244362152 + AT_rich Low_complexity Low_complexity 1 22 0 612 278 87 70 chr2 6325738 6326396 -244361458 - L1MC4a LINE L1 -1885 5923 5255 227 202 319 0 chr2 6326784 6326878 -244360976 + MIR SINE MIR 19 142 -120 580 289 100 39 chr2 6326975 6327415 -244360439 + L2 LINE L2 438 904 -2410 189 279 132 37 chr2 6327415 6327551 -244360303 + L2 LINE L2 2051 2199 -1115 208 291 35 64 chr2 6327898 6328039 -244359815 + L2 LINE L2 2435 2571 -743 287 283 168 29 chr2 6328134 6328307 -244359547 + L2 LINE L2 2960 3156 -157 245 233 0 23 chr2 6328307 6328393 -244359461 + (CATA)n Simple_repeat Simple_repeat 4 87 0 378 0 0 0 chr2 6328849 6328891 -244358963 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 0 62 0 chr2 6330231 6330263 -244357591 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2391 78 10 0 chr2 6330263 6330558 -244357296 - AluSq SINE Alu -15 298 1 4578 205 40 24 chr2 6330568 6332349 -244355505 - L1MB7 LINE L1 -1 6419 4619 394 290 120 4 chr2 6332342 6332618 -244355236 - L1MB7 LINE L1 -3898 2486 2179 * 196 247 124 21 chr2 6333452 6333549 -244354305 - L2 LINE L2 -4 3268 3162 428 273 132 18 chr2 6333702 6334131 -244353723 - L2 LINE L2 -219 3094 2615 1628 297 163 31 chr2 6334398 6334714 -244353140 - L2 LINE L2 -653 2661 2388 2200 112 0 0 chr2 6334714 6334999 -244352855 + AluSq SINE Alu 1 285 -28 1628 297 163 31 chr2 6334999 6336273 -244351581 - L2 LINE L2 -926 2388 861 195 42 0 0 chr2 6337007 6337031 -244350823 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2037 232 142 79 chr2 6338103 6339545 -244348309 + Charlie2a DNA MER1_type 1079 2611 -251 278 281 31 23 chr2 6339609 6339737 -244348117 + Charlie2a DNA MER1_type 2718 2846 -16 191 371 95 0 chr2 6340499 6340604 -244347250 - MIR SINE MIR -60 148 34 231 114 0 0 chr2 6341386 6341421 -244346433 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 25 0 0 0 chr2 6341833 6341858 -244345996 + AT_rich Low_complexity Low_complexity 1 25 0 213 171 24 0 chr2 6341939 6341980 -244345874 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1414 277 110 76 chr2 6342334 6345155 -244342699 - L1ME3 LINE L1 -290 5876 2892 2205 99 0 7 chr2 6345155 6345448 -244342406 + AluSq SINE Alu 1 291 -22 1414 277 110 76 chr2 6345448 6346128 -244341726 - L1ME3 LINE L1 -3274 2892 2237 1607 228 40 33 chr2 6351450 6351875 -244335979 - MSTC LTR MaLR 0 428 1 216 97 0 0 chr2 6352969 6353000 -244334854 + (TG)n Simple_repeat Simple_repeat 2 32 0 191 321 84 38 chr2 6353437 6353568 -244334286 - L2 LINE L2 -9 3263 3127 1521 223 66 85 chr2 6353938 6354562 -244333292 - LTR9 LTR ERV1 0 612 1 215 267 0 33 chr2 6355647 6355707 -244332147 + CT-rich Low_complexity Low_complexity 5 62 0 6899 31 8 0 chr2 6356187 6356991 -244330863 + L1PA3 LINE L1 5344 6153 -2 576 237 129 42 chr2 6359522 6359809 -244328045 + LTR16C LTR ERVL 180 491 0 194 271 0 0 chr2 6361129 6361177 -244326677 - MIR SINE MIR -37 225 178 1882 180 22 65 chr2 6361190 6361591 -244326263 + MLT1B LTR MaLR 1 384 -6 1650 153 65 48 chr2 6361603 6361772 -244326082 + MER46B DNA MER2_type 1 166 -2565 2137 94 10 0 chr2 6361772 6362071 -244325783 - AluY SINE Alu -9 302 1 1650 153 65 48 chr2 6362071 6362158 -244325696 + MER46B DNA MER2_type 166 143 -2588 2319 119 19 35 chr2 6362158 6362528 -244325326 + THE1B LTR MaLR 1 364 0 1650 153 65 48 chr2 6362528 6362622 -244325232 + MER46B DNA MER2_type 142 233 -3 338 285 51 7 chr2 6362625 6362762 -244325092 - MIR SINE MIR -108 154 12 646 247 58 49 chr2 6364949 6365192 -244322662 + MIR SINE MIR 15 259 -3 912 254 28 0 chr2 6365749 6365966 -244321888 + MER58A DNA MER1_type 2 224 0 603 226 161 30 chr2 6366308 6366538 -244321316 + MIR SINE MIR 3 262 0 24 0 0 0 chr2 6366845 6366869 -244320985 + AT_rich Low_complexity Low_complexity 1 24 0 2031 131 66 26 chr2 6367066 6367416 -244320438 - THE1B LTR MaLR 0 364 1 1672 174 0 10 chr2 6367552 6367851 -244320003 + AluJb SINE Alu 1 296 -16 1333 256 125 17 chr2 6367891 6368372 -244319482 - L1MC4a LINE L1 -1883 5925 5393 189 136 16 56 chr2 6368569 6368694 -244319160 + (TA)n Simple_repeat Simple_repeat 1 120 0 262 294 59 54 chr2 6368949 6369214 -244318640 - L1MC/D LINE L1 -446 5675 5444 267 356 8 0 chr2 6369215 6369333 -244318521 - MIR SINE MIR -57 151 33 400 267 50 69 chr2 6369702 6369904 -244317950 - L2 LINE L2 -5 3308 3111 338 326 45 2 chr2 6371716 6371835 -244316019 + MIR SINE MIR 38 157 -51 1603 164 60 38 chr2 6371836 6372201 -244315653 - THE1C LTR MaLR 0 375 3 9728 130 12 38 chr2 6372203 6373823 -244314031 - THE1C-int LTR MaLR 0 1580 3 1763 151 37 45 chr2 6373825 6374203 -244313651 - THE1C LTR MaLR 0 375 1 554 304 81 26 chr2 6375798 6376071 -244311783 + L2 LINE L2 2358 2645 -669 434 316 27 32 chr2 6376111 6376298 -244311556 + L2 LINE L2 3089 3274 -39 2324 90 0 3 chr2 6376302 6376613 -244311241 - AluSg SINE Alu 0 310 1 180 0 0 0 chr2 6377282 6377302 -244310552 + (T)n Simple_repeat Simple_repeat 1 20 0 2216 83 0 7 chr2 6377682 6377982 -244309872 - AluY SINE Alu -13 298 1 279 327 27 9 chr2 6378155 6378265 -244309589 - MIR SINE MIR -55 153 42 1751 210 87 2 chr2 6380176 6380591 -244307263 - L1MC3 LINE L1 -28 7757 7308 274 197 57 90 chr2 6380710 6380832 -244307022 - MLT1F1 LTR MaLR -437 130 13 3615 199 96 29 chr2 6380832 6381879 -244305975 - L1MC3 LINE L1 -710 7075 5893 639 217 71 11 chr2 6381894 6382078 -244305776 - L1MC1 LINE L1 -5 6328 6134 1098 205 29 29 chr2 6382085 6382358 -244305496 - MLT1A2 LTR MaLR -5 369 97 348 24 0 0 chr2 6382394 6382435 -244305419 + (CA)n Simple_repeat Simple_repeat 2 42 0 287 78 69 29 chr2 6382439 6382541 -244305313 + (TA)n Simple_repeat Simple_repeat 1 106 0 297 0 0 0 chr2 6382556 6382589 -244305265 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 240 133 27 chr2 6382615 6382690 -244305164 - MLT1A2 LTR MaLR -304 86 4 2754 174 30 8 chr2 6382690 6383220 -244304634 - L1MC1 LINE L1 -196 6137 5590 397 272 30 53 chr2 6383561 6383730 -244304124 + MIR SINE MIR 67 231 -31 330 135 29 144 chr2 6383741 6383845 -244304009 - L1MC4 LINE L1 -1341 6981 1980 586 257 27 48 chr2 6384174 6384361 -244303493 - MER5A DNA MER1_type 0 189 7 208 274 50 69 chr2 6386019 6386130 -244301724 - MIR SINE MIR -97 111 2 2125 156 77 31 chr2 6387349 6387864 -244299990 - MLT2A2 LTR ERVL 0 554 1 328 263 135 0 chr2 6387877 6388010 -244299844 - MIR SINE MIR -14 248 98 1774 105 4 8 chr2 6388496 6388754 -244299100 + AluSc SINE Alu 39 295 -14 1684 174 43 40 chr2 6389684 6390099 -244297755 + L1MA9 LINE L1 5903 6311 -1 196 263 100 50 chr2 6390466 6390546 -244297308 + L2 LINE L2 3169 3252 -20 307 229 280 8 chr2 6391559 6391677 -244296177 + MIR SINE MIR 20 169 -93 205 151 38 0 chr2 6392810 6392863 -244294991 + (TA)n Simple_repeat Simple_repeat 2 56 0 2330 88 0 0 chr2 6393004 6393310 -244294544 + AluSq SINE Alu 1 306 -7 225 0 73 24 chr2 6393328 6393369 -244294485 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 1928 153 0 0 chr2 6393383 6393684 -244294170 + AluJo SINE Alu 3 303 -9 448 256 125 57 chr2 6393815 6393991 -244293863 + MIR SINE MIR 49 236 -26 206 294 147 71 chr2 6394227 6394465 -244293389 - L2 LINE L2 0 3272 3017 495 212 30 0 chr2 6394602 6394701 -244293153 + Tigger3b DNA MER2_type 1 102 -1129 * 4450 130 50 84 chr2 6394699 6395690 -244292164 + Tigger3b DNA MER2_type 274 1231 0 257 256 60 51 chr2 6395953 6396070 -244291784 + MIR3 SINE MIR 52 169 -39 292 358 73 0 chr2 6401954 6402077 -244285777 - L2 LINE L2 -20 3252 3121 291 316 52 29 chr2 6402200 6402336 -244285518 - MIR SINE MIR -113 149 11 555 283 46 5 chr2 6403138 6403357 -244284497 - L1MA9 LINE L1 -38 6274 6047 298 372 141 5 chr2 6403419 6403610 -244284244 + MIR SINE MIR 25 241 -21 192 343 15 0 chr2 6404244 6404311 -244283543 - MIR SINE MIR -1 261 194 224 307 107 60 chr2 6405137 6405287 -244282567 - MIR SINE MIR -13 249 93 412 313 79 18 chr2 6405886 6406116 -244281738 + MIR SINE MIR 13 252 -10 299 192 0 0 chr2 6406230 6406282 -244281572 + L2 LINE L2 3261 3312 -1 505 95 0 0 chr2 6408043 6408117 -244279737 + FLAM_A SINE Alu 69 142 0 192 97 0 0 chr2 6409289 6409320 -244278534 + (T)n Simple_repeat Simple_repeat 1 31 0 581 246 102 60 chr2 6410911 6411126 -244276728 + MER58A DNA MER1_type 1 224 0 261 254 17 0 chr2 6412838 6412897 -244274957 - L2 LINE L2 -18 3295 3236 275 210 16 0 chr2 6413967 6414029 -244273825 + Charlie8 DNA MER1_type 91 153 -2264 494 286 17 17 chr2 6414565 6414740 -244273114 + MARNA DNA Mariner 177 351 -235 191 393 0 11 chr2 6414748 6414837 -244273017 - MIR SINE MIR -8 254 167 377 281 12 69 chr2 6414944 6415104 -244272750 - MIR SINE MIR 0 262 112 201 250 0 0 chr2 6416180 6416240 -244271614 + T-rich Low_complexity Low_complexity 1 60 0 429 277 50 0 chr2 6416802 6416921 -244270933 - MLT1B LTR MaLR -2 388 264 2139 133 7 0 chr2 6417377 6417686 -244270168 + AluSx SINE Alu 1 311 -1 222 194 0 104 chr2 6420408 6420475 -244267379 + MER5B DNA MER1_type 109 168 -10 456 19 0 0 chr2 6422240 6422293 -244265561 + (TG)n Simple_repeat Simple_repeat 2 54 0 3499 121 13 26 chr2 6422633 6423164 -244264690 - MER1A DNA MER1_type 0 527 4 385 305 68 28 chr2 6423241 6423418 -244264436 - L2 LINE L2 -9 3304 3121 270 288 62 27 chr2 6423389 6423535 -244264319 - L2 LINE L2 -445 2869 2719 * 315 303 63 0 chr2 6423784 6423926 -244263928 - MER58A DNA MER1_type -31 193 43 528 193 37 9 chr2 6423926 6424035 -244263819 + L1MB8 LINE L1 6060 6171 -7 1443 214 49 45 chr2 6424382 6424831 -244263023 - MLT1C LTR MaLR -16 451 1 359 262 104 0 chr2 6425118 6425350 -244262504 - MLT1G1 LTR MaLR -12 583 236 688 90 0 0 chr2 6426179 6426268 -244261586 + AluSg/x SINE Alu 206 294 -15 237 213 133 0 chr2 6427396 6427471 -244260383 + MER112 DNA MER1_type 145 229 -31 182 306 94 12 chr2 6428820 6428905 -244258949 + MIR3 SINE MIR 110 201 -7 285 252 37 47 chr2 6429962 6430069 -244257785 - MIR3 SINE MIR -6 202 97 200 339 116 0 chr2 6430631 6430743 -244257111 + L2 LINE L2 3136 3260 -12 214 314 0 29 chr2 6430791 6430861 -244256993 + GA-rich Low_complexity Low_complexity 4 71 0 * 812 213 26 6 chr2 6430841 6431156 -244256698 + (TGGA)n Simple_repeat Simple_repeat 1 321 0 432 171 0 0 chr2 6431172 6431254 -244256600 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 767 154 15 12 chr2 6431276 6431545 -244256309 + (TGGA)n Simple_repeat Simple_repeat 1 270 0 758 148 11 33 chr2 6431563 6431746 -244256108 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2399 101 0 0 chr2 6435063 6435370 -244252484 - AluSq SINE Alu -6 307 1 345 314 47 82 chr2 6437066 6437384 -244250470 - L2 LINE L2 -61 3211 2905 1701 209 64 9 chr2 6437484 6437920 -244249934 - MLT1C LTR MaLR -4 463 4 28 29 0 0 chr2 6439059 6439094 -244248760 + AT_rich Low_complexity Low_complexity 1 35 0 212 185 0 15 chr2 6439447 6439512 -244248342 + (TG)n Simple_repeat Simple_repeat 1 64 0 2322 92 45 0 chr2 6439517 6439852 -244248002 - THE1A LTR MaLR 0 355 6 194 295 253 24 chr2 6439961 6440127 -244247727 - MIR SINE MIR -19 243 40 263 306 34 54 chr2 6440558 6440705 -244247149 - MIR SINE MIR -76 186 43 215 333 66 68 chr2 6441097 6441463 -244246391 - L2 LINE L2 -13 3259 2895 204 296 19 0 chr2 6441465 6441519 -244246335 + L2 LINE L2 3259 3313 0 253 267 70 0 chr2 6441865 6441951 -244245903 + L3 LINE CR1 639 730 -847 2349 135 25 0 chr2 6442335 6442690 -244245164 + THE1B LTR MaLR 1 364 0 265 370 31 24 chr2 6443085 6443212 -244244642 - MIR SINE MIR -58 150 23 1667 108 0 0 chr2 6443807 6444019 -244243835 + AluSq SINE Alu 1 212 -101 291 312 88 35 chr2 6444522 6444692 -244243162 - MIR SINE MIR -71 191 13 216 0 0 0 chr2 6445039 6445063 -244242791 + (CA)n Simple_repeat Simple_repeat 2 25 0 445 227 62 0 chr2 6445375 6445472 -244242382 + MER5A DNA MER1_type 7 109 -80 891 260 149 6 chr2 6445510 6445845 -244242009 - MLT1E LTR MaLR 0 593 211 2348 135 75 96 chr2 6445913 6446504 -244241350 + LTR18B LTR ERVL 1 578 -36 213 121 0 0 chr2 6446528 6446561 -244241293 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 278 237 322 0 chr2 6446568 6446686 -244241168 - MLT1E LTR MaLR -435 158 3 353 237 0 0 chr2 6446766 6446842 -244241012 + MLT1A1 LTR MaLR 1 76 -289 823 178 76 11 chr2 6446875 6447060 -244240794 + MLT1A1 LTR MaLR 169 365 0 461 336 132 40 chr2 6447101 6447841 -244240013 + L2 LINE L2 1812 2619 -695 190 232 58 58 chr2 6447862 6447931 -244239923 - L3 LINE CR1 -329 1248 1180 216 288 17 0 chr2 6449476 6449535 -244238319 + L2 LINE L2 3248 3307 -6 279 275 72 51 chr2 6449622 6449760 -244238094 + MIR3 SINE MIR 2 142 -66 878 259 92 28 chr2 6450593 6451123 -244236731 - L1MC5 LINE L1 -47 7914 7351 2390 85 3 0 chr2 6451266 6451559 -244236295 + AluY SINE Alu 1 294 -17 235 300 29 0 chr2 6452342 6452412 -244235442 + CT-rich Low_complexity Low_complexity 6 77 0 729 275 81 95 chr2 6454135 6454651 -244233203 - MLT1H LTR MaLR 0 549 41 210 71 0 0 chr2 6454698 6454726 -244233128 + (A)n Simple_repeat Simple_repeat 1 28 0 375 330 107 23 chr2 6455558 6456036 -244231818 - L2 LINE L2 -912 2402 1885 1778 187 51 48 chr2 6456054 6456449 -244231405 - MSTD LTR MaLR 0 396 1 418 325 0 0 chr2 6457264 6457381 -244230473 - MIR SINE MIR -5 257 141 232 121 0 0 chr2 6457626 6457659 -244230195 + MER31B LTR ERV1 1 33 -433 428 258 10 33 chr2 6457661 6457827 -244230027 + MER31A-int LTR ERV1 3082 3768 -2178 * 8356 178 50 44 chr2 6457806 6458280 -244229574 + MER31A-int LTR ERV1 3102 3572 -1364 2457 81 0 0 chr2 6458280 6458587 -244229267 - AluY SINE Alu -4 307 1 8356 178 50 44 chr2 6458587 6459917 -244227937 + MER31A-int LTR ERV1 3572 4916 -20 2549 153 26 52 chr2 6459917 6460415 -244227439 + MER31A LTR ERV1 1 485 0 356 294 137 0 chr2 6461167 6461313 -244226541 - MIR SINE MIR -78 184 19 217 336 0 28 chr2 6461663 6461806 -244226048 + CT-rich Low_complexity Low_complexity 4 142 0 1224 180 0 14 chr2 6462369 6462586 -244225268 - AluJb SINE Alu -13 299 86 1532 192 44 101 chr2 6462681 6463133 -244224721 + MLT1C LTR MaLR 1 424 -43 2359 96 0 3 chr2 6463133 6463436 -244224418 - AluSx SINE Alu -10 302 1 1532 192 44 101 chr2 6463436 6463478 -244224376 + MLT1C LTR MaLR 424 467 0 284 332 73 32 chr2 6463629 6463849 -244224005 + MIR SINE MIR 21 249 -13 1019 240 40 49 chr2 6463902 6464231 -244223623 + MLT2C1 LTR ERVL 6 331 -66 861 182 6 0 chr2 6464292 6464457 -244223397 + MLT1C-int LTR MaLR 22 187 -1184 * 962 221 103 0 chr2 6464454 6464658 -244223196 + MLT1C-int LTR MaLR 341 565 -806 301 301 170 20 chr2 6464808 6464961 -244222893 + L2 LINE L2 3097 3272 0 256 346 110 39 chr2 6465240 6465575 -244222279 + L2 LINE L2 2826 3184 -88 306 235 37 12 chr2 6465620 6465701 -244222153 + MER91B DNA MER1_type 57 139 -51 374 256 0 0 chr2 6465860 6465946 -244221908 - MIR SINE MIR -1 261 176 190 280 147 0 chr2 6466241 6466316 -244221538 + L2 LINE L2 3193 3278 -35 331 303 49 33 chr2 6466826 6466948 -244220906 + L2 LINE L2 3134 3257 -15 442 176 0 20 chr2 6466954 6467056 -244220798 + GA-rich Low_complexity Low_complexity 1 100 0 629 246 154 71 chr2 6467248 6467586 -244220268 - MLT1G3 LTR MaLR -42 488 123 900 216 98 98 chr2 6467590 6467949 -244219905 + MSTC LTR MaLR 1 412 -16 3158 81 0 3 chr2 6468394 6468779 -244219075 - L1PA7 LINE L1 -13 6141 5758 225 217 0 0 chr2 6469314 6469360 -244218494 - L1ME LINE L1 -500 5621 5576 1209 196 56 49 chr2 6469450 6469756 -244218098 - MLT2B3 LTR ERVL 0 554 247 192 296 182 11 chr2 6470485 6470573 -244217281 - MIR SINE MIR -72 136 34 254 333 43 17 chr2 6472005 6472122 -244215732 - MIR SINE MIR -112 150 31 1553 205 32 46 chr2 6472217 6472587 -244215267 + MLT1A1 LTR MaLR 1 365 0 379 309 9 0 chr2 6473335 6473445 -244214409 + L2 LINE L2 3200 3310 -3 223 197 0 42 chr2 6473690 6473761 -244214093 + G-rich Low_complexity Low_complexity 2 69 0 1630 148 65 0 chr2 6475289 6475552 -244212302 + AluSx SINE Alu 1 280 -32 385 326 85 35 chr2 6477302 6477679 -244210175 + L1ME LINE L1 5429 5824 -297 420 229 14 25 chr2 6478069 6478210 -244209644 - MLT1G1 LTR MaLR -400 195 3 361 167 0 0 chr2 6478211 6478271 -244209583 - MER112 DNA MER1_type -193 67 8 303 257 112 26 chr2 6478623 6478775 -244209079 - L1ME LINE L1 -380 5741 5577 184 351 43 32 chr2 6479516 6479610 -244208244 - L2 LINE L2 -230 3042 2948 240 86 0 0 chr2 6481623 6481658 -244206196 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 2168 261 93 53 chr2 6481983 6483215 -244204639 + L1ME2 LINE L1 3281 4684 -1462 353 83 0 0 chr2 6483215 6483263 -244204591 - MADE1 DNA Mariner 0 80 33 2168 261 93 53 chr2 6483263 6483373 -244204481 + L1ME2 LINE L1 4684 4788 -1358 1143 236 24 39 chr2 6483381 6483712 -244204142 + MER58B DNA MER1_type 1 326 -15 1388 267 65 49 chr2 6483727 6484882 -244202972 + L1ME2 LINE L1 4791 5921 -243 1605 102 56 0 chr2 6484882 6485098 -244202756 + MER30 DNA MER1_type 3 230 0 1388 267 65 49 chr2 6485098 6485207 -244202647 + L1ME2 LINE L1 5921 6027 -137 1108 205 120 83 chr2 6485421 6485796 -244202058 + MLT1B LTR MaLR 2 390 0 902 196 30 0 chr2 6485838 6486006 -244201848 - MER58B DNA MER1_type -1 340 168 2788 244 54 15 chr2 6486368 6487287 -244200567 + L1PA12 LINE L1 2254 3065 -4509 12496 233 17 37 chr2 6487288 6490797 -244197057 - L1P LINE L1 -1082 5064 1627 271 263 25 0 chr2 6491293 6491373 -244196481 + MER103 DNA DNA 7 88 -78 288 170 0 0 chr2 6492029 6492082 -244195772 + (TG)n Simple_repeat Simple_repeat 1 53 0 346 311 115 52 chr2 6492257 6492527 -244195327 + L1M2a LINE L1 1041 1327 -5841 319 324 29 0 chr2 6493524 6493626 -244194228 - MIR SINE MIR -62 200 96 1998 138 17 3 chr2 6494742 6495040 -244192814 + AluJb SINE Alu 1 302 -10 28 0 0 0 chr2 6495091 6495119 -244192735 + AT_rich Low_complexity Low_complexity 1 28 0 660 151 95 0 chr2 6495347 6495473 -244192381 - L1MA9 LINE L1 0 6312 6175 208 148 0 37 chr2 6495479 6495533 -244192321 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 226 213 0 0 chr2 6495542 6495589 -244192265 - L1MA9 LINE L1 -147 6165 6119 369 149 0 0 chr2 6496259 6496326 -244191528 + (TG)n Simple_repeat Simple_repeat 1 67 0 4541 132 7 11 chr2 6496543 6497257 -244190597 + MER50 LTR ERV1 1 711 -23 323 309 152 25 chr2 6497274 6497630 -244190224 - L2 LINE L2 -696 2618 2218 2188 119 0 0 chr2 6498019 6498314 -244189540 - AluSx SINE Alu -17 295 1 3940 157 31 37 chr2 6498747 6499485 -244188369 - MER50 LTR ERV1 0 734 1 256 294 56 40 chr2 6499494 6499620 -244188234 - L2 LINE L2 -512 2802 2675 880 144 20 0 chr2 6500917 6501063 -244186791 - L1MA5A LINE L1 0 6297 6149 261 293 0 37 chr2 6501406 6501488 -244186366 + MIR SINE MIR 38 116 -92 2210 118 43 38 chr2 6501988 6502361 -244185493 + THE1C LTR MaLR 1 375 0 454 315 55 22 chr2 6502963 6503328 -244184526 - L1M4 LINE L1 -2164 3982 3606 188 65 0 32 chr2 6503336 6503367 -244184487 + (TCC)n Simple_repeat Simple_repeat 3 32 0 349 280 73 7 chr2 6503698 6503848 -244184006 - L1M4 LINE L1 -2922 3224 3065 219 311 104 55 chr2 6504381 6504476 -244183378 + MIR SINE MIR 57 146 -116 2185 131 0 0 chr2 6504476 6504782 -244183072 - AluSq SINE Alu -7 306 1 219 311 104 55 chr2 6504782 6504869 -244182985 + MIR SINE MIR 146 248 -14 238 247 0 71 chr2 6505088 6505173 -244182681 + T-rich Low_complexity Low_complexity 2 80 0 315 113 0 0 chr2 6505589 6505642 -244182212 + (TG)n Simple_repeat Simple_repeat 2 54 0 2156 126 70 17 chr2 6507083 6507439 -244180415 + THE1C LTR MaLR 1 375 0 1826 153 0 0 chr2 6507821 6508115 -244179739 + AluSx SINE Alu 22 315 0 212 318 115 27 chr2 6508165 6508313 -244179541 - MIR3 SINE MIR -45 163 3 350 333 60 18 chr2 6509678 6509846 -244178008 + MER5B DNA MER1_type 1 175 -3 332 250 20 60 chr2 6511214 6511314 -244176540 + MIR SINE MIR 50 145 -63 252 122 0 0 chr2 6511972 6512013 -244175841 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 333 42 14 chr2 6513023 6513095 -244174759 + L2 LINE L2 3016 3089 -183 2278 84 0 37 chr2 6513120 6513442 -244174412 - AluSg SINE Alu 0 310 1 822 144 106 48 chr2 6513537 6513612 -244174242 + THE1C LTR MaLR 1 70 -305 2661 112 14 16 chr2 6513612 6513977 -244173877 + THE1B LTR MaLR 1 364 0 822 144 106 48 chr2 6513977 6514109 -244173745 + THE1C LTR MaLR 70 220 -155 366 23 0 0 chr2 6514583 6514626 -244173228 + (CA)n Simple_repeat Simple_repeat 1 43 0 1301 186 13 13 chr2 6514642 6514878 -244172976 + MER46A DNA MER2_type 1 236 0 495 239 117 35 chr2 6514988 6515218 -244172636 - HAL1 LINE L1 -10 2497 2249 760 318 64 41 chr2 6515305 6516013 -244171841 - HAL1 LINE L1 -533 1974 1251 361 233 0 33 chr2 6516034 6516124 -244171730 - HAL1 LINE L1 -1355 1152 1066 1321 247 98 43 chr2 6516184 6516654 -244171200 - MLT1D LTR MaLR -9 496 1 251 309 34 7 chr2 6516678 6516827 -244171027 - HAL1 LINE L1 -1189 1318 1166 1168 239 97 50 chr2 6516950 6517489 -244170365 - HAL1 LINE L1 -1313 1194 631 387 281 87 20 chr2 6518790 6518986 -244168868 - MIR SINE MIR -13 249 41 21 0 0 0 chr2 6519241 6519262 -244168592 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 6520230 6520265 -244167589 + AT_rich Low_complexity Low_complexity 1 35 0 210 106 47 35 chr2 6520272 6520357 -244167497 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 23 0 0 0 chr2 6520360 6520383 -244167471 + AT_rich Low_complexity Low_complexity 1 23 0 227 346 79 0 chr2 6521971 6522072 -244165782 - MIR SINE MIR -84 124 16 668 64 0 32 chr2 6522631 6522725 -244165129 - L1PA8 LINE L1 0 6172 6082 317 128 0 0 chr2 6522725 6522772 -244165082 - L1PA8 LINE L1 -44 6128 6082 345 85 0 0 chr2 6522772 6522819 -244165035 - L1PA8A LINE L1 -42 6089 6043 * 380 56 0 153 chr2 6522794 6522866 -244164988 - L1PA8 LINE L1 -30 6142 6082 353 64 0 0 chr2 6522866 6522913 -244164941 - L1PA8 LINE L1 -44 6128 6082 354 104 0 0 chr2 6522913 6522961 -244164893 - L1PA8 LINE L1 -44 6128 6081 377 43 0 0 chr2 6522961 6523007 -244164847 - L1PA8 LINE L1 -45 6127 6082 * 380 56 0 153 chr2 6522982 6523054 -244164800 - L1PA8 LINE L1 -30 6142 6082 329 110 0 151 chr2 6523029 6523102 -244164752 - L1PA8 LINE L1 -30 6142 6081 * 377 43 0 0 chr2 6523102 6523148 -244164706 - L1PA8 LINE L1 -45 6127 6082 367 69 0 153 chr2 6523123 6523195 -244164659 - L1PA8A LINE L1 -28 6103 6043 * 752 74 0 90 chr2 6523170 6523292 -244164562 - L1PA8 LINE L1 -30 6142 6032 382 339 32 27 chr2 6523514 6523700 -244164154 + MIR SINE MIR 50 236 -26 267 311 48 10 chr2 6524019 6524122 -244163732 - MIR SINE MIR -150 112 6 993 304 127 32 chr2 6524227 6524907 -244162947 + L2 LINE L2 2112 2855 -459 310 309 77 101 chr2 6525293 6525810 -244162044 + L2 LINE L2 2809 3313 0 298 217 158 33 chr2 6526940 6527060 -244160794 + L2 LINE L2 2235 2369 -945 366 309 144 45 chr2 6527745 6527946 -244159908 + L1MEd LINE L1 411 631 -5488 410 282 0 10 chr2 6528238 6528341 -244159513 - MER5A DNA MER1_type -79 110 9 563 247 20 13 chr2 6528375 6528525 -244159329 - MLT1E2 LTR MaLR -3 623 473 2605 138 4 5 chr2 6528619 6529068 -244158786 - L1P LINE L1 -1544 4602 4158 1880 253 109 20 chr2 6529077 6529790 -244158064 - L1ME1 LINE L1 -17 6149 5373 296 209 43 87 chr2 6529799 6529822 -244158032 - L1ME1 LINE L1 -846 5300 5278 2290 77 0 3 chr2 6529822 6530108 -244157746 + L1PA6 LINE L1 5870 6154 0 296 209 43 87 chr2 6530108 6530199 -244157655 - L1ME1 LINE L1 -868 5278 5191 * 8082 158 49 33 chr2 6530193 6530673 -244157181 + L1MCa LINE L1 69 540 -5886 1562 175 44 34 chr2 6530673 6530970 -244156884 - AluJo SINE Alu -12 300 1 8082 158 49 33 chr2 6530970 6531900 -244155954 + L1MCa LINE L1 540 1509 -4917 2494 146 41 7 chr2 6531900 6532311 -244155543 + MSTA LTR MaLR 1 425 -3 8082 158 49 33 chr2 6532311 6532451 -244155403 + L1MCa LINE L1 1509 1645 -4781 1213 268 51 28 chr2 6532456 6532949 -244154905 - L1ME1 LINE L1 -2362 3784 3281 400 167 14 0 chr2 6532956 6533028 -244154826 - 7SK RNA RNA 0 193 121 604 152 0 9 chr2 6533064 6533176 -244154678 - 7SK RNA RNA -68 125 15 6213 64 7 7 chr2 6533177 6534296 -244153558 + L1PA7 LINE L1 4918 6039 -115 1006 263 92 46 chr2 6534455 6534941 -244152913 - MLT1E LTR MaLR 0 593 103 569 194 0 0 chr2 6534927 6535020 -244152834 - MLT1E LTR MaLR -449 144 52 * 239 139 0 0 chr2 6535430 6535466 -244152388 + L1P LINE L1 5224 5259 -887 246 357 7 50 chr2 6536927 6537067 -244150787 - MIR SINE MIR -51 211 78 258 282 24 73 chr2 6537218 6537342 -244150512 - L2 LINE L2 -218 3054 2937 194 286 62 71 chr2 6537719 6537831 -244150023 - L2 LINE L2 -11 3302 3192 2446 74 0 0 chr2 6538561 6538857 -244148997 + AluSg SINE Alu 1 296 -14 2015 141 0 0 chr2 6539172 6539470 -244148384 - AluSx SINE Alu -14 298 1 2180 126 7 0 chr2 6539847 6540149 -244147705 - AluSq SINE Alu -9 304 1 1206 95 0 0 chr2 6540162 6540320 -244147534 - AluY SINE Alu -8 303 146 321 293 34 27 chr2 6540959 6541106 -244146748 - MLT1I LTR MaLR -2 407 260 911 188 73 5 chr2 6542669 6542861 -244144993 + MLT2C1 LTR ERVL 1 205 -192 798 226 68 30 chr2 6542842 6543076 -244144778 + MLT1C LTR MaLR 225 467 0 * 6047 264 77 23 chr2 6543630 6546128 -244141726 + L1MEc LINE L1 46 2644 -3571 2363 189 38 2 chr2 6547235 6547652 -244140202 - MSTB1 LTR MaLR 0 432 1 2530 149 28 28 chr2 6548215 6548643 -244139211 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr2 6550146 6550168 -244137686 + AT_rich Low_complexity Low_complexity 1 22 0 1265 221 164 45 chr2 6550183 6550706 -244137148 - L1MC2 LINE L1 0 7970 6186 281 218 30 69 chr2 6550706 6550807 -244137047 - MLT1I LTR MaLR -436 131 35 724 143 45 112 chr2 6550825 6551048 -244136806 - L1MC3 LINE L1 -706 7079 6872 204 40 0 0 chr2 6551058 6551083 -244136771 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 246 32 0 0 chr2 6551089 6551120 -244136734 + (CA)n Simple_repeat Simple_repeat 2 32 0 1365 217 75 63 chr2 6551120 6551620 -244136234 - L1MC3 LINE L1 -1230 6555 6050 5677 176 118 101 chr2 6551657 6552247 -244135607 - L1MCa LINE L1 -4184 2242 1663 186 43 0 0 chr2 6552247 6552270 -244135584 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5677 176 118 101 chr2 6552270 6553633 -244134221 - L1MCa LINE L1 -4763 1663 256 314 292 34 0 chr2 6553730 6553819 -244134035 - L1MC4 LINE L1 -1339 6703 6612 418 168 15 23 chr2 6553820 6553951 -244133903 + (TA)n Simple_repeat Simple_repeat 1 130 0 1649 182 3 20 chr2 6553956 6554252 -244133602 - AluJb SINE Alu -21 291 1 252 395 8 8 chr2 6555271 6555405 -244132449 - MIR3 SINE MIR -38 170 37 385 314 108 10 chr2 6556262 6556456 -244131398 - MIR SINE MIR 0 262 50 300 198 42 18 chr2 6556848 6557015 -244130839 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 466 140 20 0 chr2 6557177 6557277 -244130577 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 1890 153 10 0 chr2 6558017 6558325 -244129529 - AluSx SINE Alu -1 311 1 195 114 0 0 chr2 6558770 6558805 -244129049 + (CTTA)n Simple_repeat Simple_repeat 2 36 0 229 250 0 0 chr2 6559155 6559203 -244128651 - MIR SINE MIR -129 79 32 23 0 0 0 chr2 6559636 6559659 -244128195 + AT_rich Low_complexity Low_complexity 1 23 0 494 16 16 0 chr2 6562262 6562325 -244125529 + (TC)n Simple_repeat Simple_repeat 2 65 0 558 303 90 10 chr2 6562675 6562975 -244124879 + L2 LINE L2 1984 2307 -1007 198 244 22 0 chr2 6563262 6563307 -244124547 + MIR3 SINE MIR 135 180 -28 1107 233 51 10 chr2 6563436 6563732 -244124122 + MLT1C LTR MaLR 152 459 -8 290 321 18 28 chr2 6563741 6563850 -244124004 + L2 LINE L2 2344 2451 -863 506 340 36 57 chr2 6563954 6564289 -244123565 + L2 LINE L2 2986 3313 0 1371 101 48 18 chr2 6564936 6565163 -244122691 - L1MA8 LINE L1 -6 6285 6052 239 342 82 6 chr2 6565401 6565559 -244122295 - MIR SINE MIR -55 207 38 1720 185 44 15 chr2 6566082 6566366 -244121488 + MLT2B2 LTR ERVL 1 275 -279 207 0 0 0 chr2 6566366 6566389 -244121465 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1720 185 44 15 chr2 6566389 6566529 -244121325 + MLT2B2 LTR ERVL 275 410 -144 986 54 42 0 chr2 6566529 6566696 -244121158 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1720 185 44 15 chr2 6566696 6566714 -244121140 + MLT2B2 LTR ERVL 410 552 -2 1119 40 0 0 chr2 6567582 6567707 -244120147 + AluY SINE Alu 1 125 -186 9985 26 2 1 chr2 6567707 6569644 -244118210 + L1PA3 LINE L1 4230 6169 0 2143 123 0 19 chr2 6569659 6569968 -244117886 + AluSx SINE Alu 3 305 -7 319 186 0 17 chr2 6569978 6570037 -244117817 - LTR67 LTR ERVL -86 471 414 435 153 153 0 chr2 6570087 6570172 -244117682 - MER53 DNA DNA -91 98 1 252 246 15 0 chr2 6570385 6570450 -244117404 + L1ME LINE L1 5367 5432 -732 386 221 271 0 chr2 6570477 6570599 -244117255 + MIR SINE MIR 12 166 -96 2196 102 3 0 chr2 6570649 6570953 -244116901 - AluSp SINE Alu -3 310 6 377 260 21 10 chr2 6571028 6571124 -244116730 + L2 LINE L2 39 135 -3179 2730 167 28 28 chr2 6571151 6571695 -244116159 + L1MC3 LINE L1 7241 7784 -1 23 0 0 0 chr2 6571695 6571718 -244116136 + AT_rich Low_complexity Low_complexity 1 23 0 1595 62 0 0 chr2 6571718 6571910 -244115944 + AluY SINE Alu 118 309 -2 315 0 0 0 chr2 6571916 6571951 -244115903 + (TAA)n Simple_repeat Simple_repeat 2 36 0 349 267 139 0 chr2 6572842 6572943 -244114911 + MER5B DNA MER1_type 4 118 -60 948 182 61 22 chr2 6573404 6573635 -244114219 - LTR32 LTR ERVL 0 471 232 279 203 78 0 chr2 6573617 6573681 -244114173 - LTR32 LTR ERVL -400 71 3 * 334 257 83 0 chr2 6573687 6573796 -244114058 - L2 LINE L2 -79 3234 3117 794 192 46 0 chr2 6574244 6574395 -244113459 + MER97a DNA MER1_type? 19 176 -718 1345 101 0 0 chr2 6575149 6575317 -244112537 + AluSc SINE Alu 134 301 -8 912 336 126 19 chr2 6575455 6576140 -244111714 - ERVL LTR ERVL -284 5480 4723 206 328 48 40 chr2 6576709 6576834 -244111020 - MIR SINE MIR -59 203 78 279 243 57 0 chr2 6576958 6577028 -244110826 + MER91B DNA MER1_type 6 79 -111 301 179 18 0 chr2 6578104 6578160 -244109694 + MER91B DNA MER1_type 6 62 -128 204 313 51 21 chr2 6578854 6578990 -244108864 + MIR SINE MIR 3 135 -73 21 0 0 0 chr2 6579009 6579030 -244108824 + AT_rich Low_complexity Low_complexity 1 21 0 2258 104 44 41 chr2 6579473 6579839 -244108015 + THE1C LTR MaLR 5 371 -4 581 277 116 31 chr2 6580059 6580351 -244107503 + LTR33 LTR ERVL 205 521 0 1066 81 0 0 chr2 6580444 6580580 -244107274 + AluY SINE Alu 173 308 -3 351 239 0 0 chr2 6580797 6580927 -244106927 + (TG)n Simple_repeat Simple_repeat 2 131 0 579 239 3 0 chr2 6580949 6581306 -244106548 + (TG)n Simple_repeat Simple_repeat 1 358 0 252 305 162 0 chr2 6581956 6582110 -244105744 - MIR3 SINE MIR -9 199 21 1188 196 46 39 chr2 6584167 6584447 -244103407 + AluJo SINE Alu 1 282 -30 3242 190 137 112 chr2 6584517 6585036 -244102818 + L1MC3 LINE L1 6566 7070 -715 263 294 20 10 chr2 6585036 6585138 -244102716 + MLT1F1 LTR MaLR 29 131 -436 3242 190 137 112 chr2 6585138 6585696 -244102158 + L1MC3 LINE L1 7070 7774 -11 267 365 19 0 chr2 6585701 6585808 -244102046 - L2 LINE L2 -15 3298 3190 417 330 57 24 chr2 6586312 6586524 -244101330 + MIR SINE MIR 14 232 -30 477 0 0 0 chr2 6586735 6586788 -244101066 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 185 0 40 0 chr2 6586787 6586812 -244101042 + (TAA)n Simple_repeat Simple_repeat 2 27 0 * 1301 268 49 12 chr2 6587134 6587544 -244100310 + LTR16C LTR ERVL 67 491 0 3366 187 101 41 chr2 6587763 6588612 -244099242 - L1MA4 LINE L1 -1 6299 5400 1084 103 5 19 chr2 6589890 6590380 -244097474 + (TCCA)n Simple_repeat Simple_repeat 1 666 0 289 316 129 84 chr2 6591333 6591558 -244096296 - L2 LINE L2 -8 3264 3030 261 353 181 23 chr2 6591706 6591839 -244096015 - L2 LINE L2 -8 3264 3111 388 398 25 0 chr2 6592311 6592472 -244095382 - L2 LINE L2 -1 3271 3107 637 91 20 0 chr2 6594028 6594127 -244093727 - L1MA10 LINE L1 0 6334 6234 1695 161 0 28 chr2 6596335 6596649 -244091205 - AluJb SINE Alu 0 307 2 186 292 31 0 chr2 6597110 6597175 -244090679 - MIR SINE MIR -70 192 126 1721 184 5 89 chr2 6599590 6599779 -244088075 + MER57A LTR ERV1 1 134 -269 2071 143 23 52 chr2 6599779 6600164 -244087690 + THE1C LTR MaLR 1 374 -1 1721 184 5 89 chr2 6600164 6600414 -244087440 + MER57A LTR ERV1 134 403 0 242 240 125 87 chr2 6601260 6601582 -244086272 + L1ME4a LINE L1 5584 5927 -194 207 0 0 0 chr2 6601582 6601605 -244086249 + (TG)n Simple_repeat Simple_repeat 2 24 0 242 240 125 87 chr2 6601605 6601698 -244086156 + L1ME4a LINE L1 5927 6015 -106 22 35 0 0 chr2 6601755 6601784 -244086070 + AT_rich Low_complexity Low_complexity 1 29 0 393 276 91 73 chr2 6601866 6602154 -244085700 - L1MEd LINE L1 -4867 1252 971 1596 180 16 32 chr2 6602154 6602470 -244085384 - AluJo SINE Alu -1 311 1 393 276 91 73 chr2 6602470 6602743 -244085111 - L1MEd LINE L1 -5148 971 681 1807 236 31 8 chr2 6603391 6603776 -244084078 + MSTD LTR MaLR 1 394 -2 453 293 47 22 chr2 6603818 6604050 -244083804 + L1MC/D LINE L1 5584 5821 -1987 767 301 0 0 chr2 6604051 6604254 -244083600 + MER63A DNA MER1_type 1 203 -7 1625 147 0 96 chr2 6604384 6604698 -244083156 + AluJo SINE Alu 3 286 -26 24 32 0 0 chr2 6604966 6604997 -244082857 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 6605272 6605300 -244082554 + AT_rich Low_complexity Low_complexity 1 28 0 1613 202 71 49 chr2 6605306 6605672 -244082182 + MLT1A2 LTR MaLR 1 374 0 628 49 24 0 chr2 6607726 6607808 -244080046 - L1PA10 LINE L1 -8 6160 6077 242 35 0 0 chr2 6607809 6607838 -244080016 + L1PA10 LINE L1 6020 6048 -120 5657 273 47 66 chr2 6608146 6609229 -244078625 - L2 LINE L2 -405 2909 1806 315 0 0 0 chr2 6609229 6609264 -244078590 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1509 173 24 12 chr2 6609267 6609516 -244078338 - AluJb SINE Alu -30 282 31 564 195 0 0 chr2 6609516 6609598 -244078256 - AluJ/FLAM SINE Alu -228 84 3 5657 273 47 66 chr2 6609598 6609673 -244078181 - L2 LINE L2 -1509 1805 1730 1952 126 31 0 chr2 6609673 6609959 -244077895 + AluSx SINE Alu 17 311 -1 5657 273 47 66 chr2 6609959 6611057 -244076797 - L2 LINE L2 -1584 1730 612 223 385 62 26 chr2 6611220 6611412 -244076442 + L2 LINE L2 2652 2850 -464 326 303 92 17 chr2 6612169 6612288 -244075566 - MIR SINE MIR -60 148 21 180 0 0 0 chr2 6613273 6613293 -244074561 + (A)n Simple_repeat Simple_repeat 1 20 0 902 107 61 0 chr2 6613904 6614035 -244073819 + MER85 DNA T2_type 1 139 0 272 311 145 25 chr2 6615208 6615589 -244072265 + MLT1J LTR MaLR 35 509 -2 2133 171 97 13 chr2 6615981 6616374 -244071480 + MSTB LTR MaLR 1 426 0 1818 144 3 56 chr2 6616540 6616860 -244070994 + AluJb SINE Alu 1 303 -9 249 108 0 0 chr2 6616860 6616897 -244070957 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 385 15 22 chr2 6617033 6617168 -244070686 - L2 LINE L2 -534 2780 2647 181 216 54 0 chr2 6618296 6618333 -244069521 + L2 LINE L2 3182 3220 -93 1820 214 23 3 chr2 6619370 6619721 -244068133 - MLT1A1 LTR MaLR -1 364 7 1634 174 59 3 chr2 6620474 6620762 -244067092 - AluJb SINE Alu -8 304 1 222 190 17 17 chr2 6620803 6620861 -244066993 + A-rich Low_complexity Low_complexity 5 62 0 533 277 34 0 chr2 6620872 6621020 -244066834 - MIR SINE MIR -108 154 2 240 143 0 0 chr2 6621755 6621797 -244066057 + (TA)n Simple_repeat Simple_repeat 1 42 0 56 16 0 0 chr2 6621844 6621907 -244065947 + AT_rich Low_complexity Low_complexity 1 63 0 1436 182 0 0 chr2 6622008 6622255 -244065599 - MER57A LTR ERV1 0 403 157 1872 149 10 7 chr2 6624651 6624939 -244062915 - AluSx SINE Alu -23 289 1 187 241 74 19 chr2 6625063 6625117 -244062737 + L2 LINE L2 3195 3251 -21 191 330 80 18 chr2 6625140 6625252 -244062602 - L2 LINE L2 -6 3307 3189 2153 135 0 0 chr2 6625537 6625834 -244062020 - AluSx SINE Alu -15 297 1 360 316 0 0 chr2 6625869 6625964 -244061890 + L2 LINE L2 3174 3268 -4 1975 193 51 22 chr2 6626028 6626442 -244061412 + MSTB LTR MaLR 1 426 0 308 159 0 16 chr2 6627232 6627295 -244060559 + (TG)n Simple_repeat Simple_repeat 2 63 0 268 278 144 0 chr2 6629237 6629334 -244058520 - MIR SINE MIR -75 187 77 1651 154 7 54 chr2 6629508 6629806 -244058048 + AluJo SINE Alu 5 288 -24 237 65 0 0 chr2 6629967 6629998 -244057856 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 6630019 6630040 -244057814 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 576 29 0 0 chr2 6630039 6630109 -244057745 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 192 40 0 0 chr2 6630132 6630157 -244057697 + (GA)n Simple_repeat Simple_repeat 2 26 0 22 35 0 0 chr2 6630201 6630230 -244057624 + AT_rich Low_complexity Low_complexity 1 29 0 234 282 26 13 chr2 6630903 6630981 -244056873 + MIR3 SINE MIR 100 178 -30 22 0 0 0 chr2 6631267 6631289 -244056565 + AT_rich Low_complexity Low_complexity 1 22 0 2281 96 0 7 chr2 6632231 6632532 -244055322 + AluY SINE Alu 1 299 -12 21 0 0 0 chr2 6634680 6634701 -244053153 + AT_rich Low_complexity Low_complexity 1 21 0 2270 118 0 0 chr2 6634858 6635162 -244052692 + AluSx SINE Alu 2 305 -7 207 125 0 0 chr2 6635924 6635964 -244051890 + (T)n Simple_repeat Simple_repeat 1 40 0 22 43 0 21 chr2 6635973 6636003 -244051851 + AT_rich Low_complexity Low_complexity 1 31 -15 2945 102 67 9 chr2 6636003 6636452 -244051402 - L1PB1 LINE L1 -3 6148 5674 22 43 0 21 chr2 6636452 6636468 -244051386 + AT_rich Low_complexity Low_complexity 31 46 0 2754 30 0 0 chr2 6636468 6636771 -244051083 - L1PA5 LINE L1 -11 6143 5841 235 293 57 19 chr2 6637315 6637421 -244050433 - L1MDa LINE L1 -4643 1897 1788 30 0 0 0 chr2 6637626 6637656 -244050198 + AT_rich Low_complexity Low_complexity 1 30 0 2901 194 55 5 chr2 6638464 6639042 -244048812 + MER82 DNA MER2_type 47 653 0 245 336 50 29 chr2 6639066 6639206 -244048648 + MIR3 SINE MIR 16 158 -50 7274 160 11 27 chr2 6639310 6639992 -244047862 - HSMAR2 DNA Mariner -2 1300 648 2113 128 3 0 chr2 6639992 6640290 -244047564 + AluSc SINE Alu 10 308 -1 7274 160 11 27 chr2 6640290 6640919 -244046935 - HSMAR2 DNA Mariner -654 648 10 312 227 40 13 chr2 6641409 6641484 -244046370 + MER5A DNA MER1_type 30 106 -83 402 312 26 21 chr2 6642101 6642290 -244045564 - MIR SINE MIR 0 262 73 442 286 23 15 chr2 6643344 6643477 -244044377 + MIR3 SINE MIR 75 208 0 317 304 62 0 chr2 6644842 6644954 -244042900 + MER34 LTR ERV1 1 119 -423 * 1477 265 78 13 chr2 6644943 6645407 -244042447 + LTR48B LTR ERV1 151 644 0 2289 175 144 45 chr2 6645810 6646388 -244041466 + LTR24C LTR ERV1 1 635 0 204 213 43 0 chr2 6647221 6647268 -244040586 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 241 251 5 0 chr2 6647844 6647924 -244039930 + MIR SINE MIR 97 178 -30 1678 190 14 3 chr2 6648272 6648562 -244039292 - AluJo SINE Alu -18 294 2 218 312 80 14 chr2 6648970 6649108 -244038746 + MIR SINE MIR 70 216 -46 215 288 68 0 chr2 6649212 6649285 -244038569 - MIR SINE MIR -95 167 90 13096 134 28 122 chr2 6649583 6652345 -244035509 + L1PA15-16 LINE L1 2 2502 -4347 1061 150 6 12 chr2 6652391 6652564 -244035290 + L1PA16 LINE L1 5993 6164 -2 1695 229 128 18 chr2 6652950 6653178 -244034676 - MLT1D LTR MaLR -1 504 303 2279 104 13 0 chr2 6653178 6653477 -244034377 - AluSx SINE Alu -9 303 1 1695 229 128 18 chr2 6653477 6653702 -244034152 - MLT1D LTR MaLR -202 303 1 205 153 17 34 chr2 6654407 6654466 -244033388 + CT-rich Low_complexity Low_complexity 2 59 0 202 352 44 0 chr2 6654533 6654624 -244033230 - L2 LINE L2 -1001 2313 2219 237 139 0 0 chr2 6654673 6654716 -244033138 + (CA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 6655603 6655625 -244032229 + AT_rich Low_complexity Low_complexity 1 22 0 210 362 38 0 chr2 6656887 6656992 -244030862 + MIR SINE MIR 33 141 -67 827 269 0 0 chr2 6657474 6657667 -244030187 - MER58A DNA MER1_type -5 219 27 196 241 68 33 chr2 6659565 6659656 -244028198 + MIR SINE MIR 28 126 -82 1623 99 86 65 chr2 6659656 6659948 -244027906 - AluSq SINE Alu -6 307 10 196 241 68 33 chr2 6659948 6659966 -244027888 + MIR SINE MIR 126 142 -66 266 361 38 19 chr2 6660364 6660522 -244027332 + MIR SINE MIR 54 214 -48 267 250 0 0 chr2 6661040 6661140 -244026714 + (TG)n Simple_repeat Simple_repeat 1 100 0 439 238 129 41 chr2 6661902 6662119 -244025735 - MIR SINE MIR -11 251 22 214 266 78 104 chr2 6662750 6662904 -244024950 - MER5B DNA MER1_type -35 154 5 1838 178 0 3 chr2 6663010 6663303 -244024551 + AluJb SINE Alu 3 294 -18 369 215 65 9 chr2 6663480 6663599 -244024255 - MLT1I LTR MaLR 0 450 281 236 328 25 17 chr2 6663686 6663805 -244024049 - MLT1I LTR MaLR -289 260 141 627 157 6 93 chr2 6664274 6664401 -244023453 + L1MC2 LINE L1 6188 6298 -46 2325 115 0 0 chr2 6664401 6664705 -244023149 - AluSx SINE Alu -8 304 1 627 157 6 93 chr2 6664705 6664749 -244023105 + L1MC2 LINE L1 6298 6344 0 * 1893 248 148 58 chr2 6664745 6665651 -244022203 + L1MC4 LINE L1 6914 7918 -124 333 0 0 0 chr2 6665651 6665688 -244022166 + (CA)n Simple_repeat Simple_repeat 2 38 0 1893 248 148 58 chr2 6665688 6665771 -244022083 + L1MC4 LINE L1 7918 7992 -50 2108 130 0 0 chr2 6666806 6667106 -244020748 - AluSc SINE Alu -9 300 1 1882 233 137 37 chr2 6668489 6669141 -244018713 - L1ME1 LINE L1 -18 6148 5432 1736 188 3 10 chr2 6669336 6669640 -244018214 + AluJo SINE Alu 1 302 -10 2144 190 128 0 chr2 6669867 6670289 -244017565 + MLT2B2 LTR ERVL 1 476 -39 576 36 58 29 chr2 6670289 6670426 -244017428 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 356 100 50 20 chr2 6670438 6670538 -244017316 + (TCTA)n Simple_repeat Simple_repeat 3 105 0 22 0 0 0 chr2 6670624 6670646 -244017208 + AT_rich Low_complexity Low_complexity 1 22 0 2286 123 0 0 chr2 6671078 6671386 -244016468 - AluSg SINE Alu -2 308 1 24 32 0 0 chr2 6671947 6671978 -244015876 + AT_rich Low_complexity Low_complexity 1 31 0 287 113 19 0 chr2 6672301 6672354 -244015500 + CT-rich Low_complexity Low_complexity 1 54 0 390 57 0 0 chr2 6672620 6672673 -244015181 + (TG)n Simple_repeat Simple_repeat 2 54 0 613 287 22 67 chr2 6673562 6673830 -244014024 + MLT1I LTR MaLR 95 350 -59 851 239 29 19 chr2 6674119 6674328 -244013526 + MER58A DNA MER1_type 7 217 -7 248 344 11 11 chr2 6675681 6675771 -244012083 - L2 LINE L2 -78 3194 3105 2212 111 0 3 chr2 6676860 6677157 -244010697 + AluSg SINE Alu 11 306 -4 271 196 71 131 chr2 6677205 6677319 -244010535 - MIR3 SINE MIR -21 187 85 667 247 17 11 chr2 6677319 6677493 -244010361 - MER5B DNA MER1_type -3 175 1 271 196 71 131 chr2 6677493 6677546 -244010308 - MIR3 SINE MIR -123 85 30 1314 170 50 57 chr2 6678416 6678562 -244009292 + AluJo SINE Alu 1 146 -166 2473 57 3 3 chr2 6678562 6678860 -244008994 + AluY SINE Alu 1 298 -13 1314 170 50 57 chr2 6678860 6678996 -244008858 + AluJo SINE Alu 146 281 -31 1729 138 0 8 chr2 6679395 6679682 -244008172 + AluSg SINE Alu 29 313 0 1614 169 59 72 chr2 6679888 6680278 -244007576 - MLT1B LTR MaLR 0 390 6 2138 118 3 0 chr2 6680702 6680991 -244006863 + AluSx SINE Alu 5 294 -18 2117 111 0 3 chr2 6681825 6682123 -244005731 + AluSg SINE Alu 1 297 -13 397 193 67 8 chr2 6682161 6682280 -244005574 + L1MCa LINE L1 1293 1418 -5008 204 143 0 24 chr2 6682280 6682322 -244005532 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 6682472 6682519 -244005335 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr2 6682544 6682582 -244005272 + AT_rich Low_complexity Low_complexity 1 38 0 581 194 8 23 chr2 6682810 6682939 -244004915 + MIR SINE MIR 105 231 -31 27 29 0 0 chr2 6684711 6684745 -244003109 + AT_rich Low_complexity Low_complexity 1 34 0 418 337 76 52 chr2 6686164 6686452 -244001402 - L2 LINE L2 0 3272 2978 311 273 27 9 chr2 6686525 6686635 -244001219 - MIR SINE MIR 0 262 151 335 359 132 23 chr2 6686636 6686856 -244000998 + L3 LINE CR1 1328 1571 -6 2271 153 42 30 chr2 6687327 6687875 -243999979 - MLT2A2 LTR ERVL 0 554 1 15874 90 13 3 chr2 6687875 6689962 -243997892 - HERVL-A2 LTR ERVL 0 5654 3548 406 211 65 103 chr2 6690717 6690902 -243996952 + MER104 DNA MER2_type 1 178 -2 281 365 76 54 chr2 6692532 6692902 -243994952 + L2 LINE L2 2895 3272 0 1987 250 63 33 chr2 6693804 6694976 -243992878 + L1ME1 LINE L1 4511 5724 -440 387 215 132 42 chr2 6694983 6695181 -243992673 + L1ME1 LINE L1 5965 6334 0 225 340 64 14 chr2 6695300 6695441 -243992413 + L2 LINE L2 3162 3309 -4 4184 189 22 28 chr2 6696736 6698071 -243989783 - L1MB3 LINE L1 -41 6142 4819 2202 212 40 16 chr2 6698274 6698718 -243989136 + MLT2B2 LTR ERVL 1 455 -60 951 57 19 19 chr2 6698718 6698877 -243988977 + (TCTA)n Simple_repeat Simple_repeat 2 160 0 325 335 40 50 chr2 6699791 6699991 -243987863 + MIR SINE MIR 47 244 -18 192 158 0 0 chr2 6700558 6700596 -243987258 + T-rich Low_complexity Low_complexity 1 38 0 2264 194 27 57 chr2 6703980 6704565 -243983289 - L1MC1 LINE L1 -75 6258 5739 1279 53 0 0 chr2 6704565 6704715 -243983139 - L1PA3 LINE L1 -3 6152 6003 2264 194 27 57 chr2 6704715 6705023 -243982831 - L1MC1 LINE L1 -594 5739 5423 207 283 0 0 chr2 6705471 6705517 -243982337 + (TTG)n Simple_repeat Simple_repeat 2 47 0 243 328 59 8 chr2 6705554 6705673 -243982181 + MIR SINE MIR 101 225 -37 429 310 35 10 chr2 6706026 6706229 -243981625 - MLT1L LTR MaLR 0 615 408 22 0 0 0 chr2 6706413 6706435 -243981419 + AT_rich Low_complexity Low_complexity 1 22 0 34 79 0 0 chr2 6706552 6706628 -243981226 + AT_rich Low_complexity Low_complexity 1 76 0 3621 197 48 17 chr2 6706998 6707766 -243980088 + L1MC1 LINE L1 5542 6333 0 2131 111 7 10 chr2 6708099 6708396 -243979458 - AluSq SINE Alu -17 296 1 403 281 65 41 chr2 6708630 6708876 -243978978 - L1MEc LINE L1 -3679 2536 2285 211 122 41 0 chr2 6709001 6709050 -243978804 + (TA)n Simple_repeat Simple_repeat 2 52 0 270 306 35 57 chr2 6709397 6709812 -243978042 - L1MEc LINE L1 -768 1808 1361 379 309 67 49 chr2 6709909 6710194 -243977660 - L1MEc LINE L1 -5046 1159 870 180 0 0 0 chr2 6710880 6710900 -243976954 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 439 285 56 56 chr2 6711015 6711229 -243976625 + Charlie8 DNA MER1_type 1 214 -2203 5485 20 0 0 chr2 6711686 6712271 -243975583 - L1PA3 LINE L1 -5 6150 5566 252 317 111 20 chr2 6713915 6714137 -243973717 + MIR3 SINE MIR 4 251 -11 673 234 19 6 chr2 6714567 6714725 -243973129 - MER58B DNA MER1_type 0 341 182 834 226 34 15 chr2 6714727 6714931 -243972923 + MER20 DNA MER1_type 3 210 -9 596 167 123 14 chr2 6714932 6715070 -243972784 - MER58B DNA MER1_type -152 189 37 37 39 0 0 chr2 6718507 6718558 -243969296 + AT_rich Low_complexity Low_complexity 1 51 0 253 280 167 15 chr2 6718808 6718940 -243968914 + MIR SINE MIR 1 152 -110 266 239 69 54 chr2 6718948 6719078 -243968776 - LTR67 LTR ERVL 0 557 426 2360 146 34 3 chr2 6719393 6719777 -243968077 + MSTA LTR MaLR 33 428 0 268 208 0 38 chr2 6721060 6721113 -243966741 - MER58A DNA MER1_type 0 224 174 1393 158 50 68 chr2 6721121 6721224 -243966630 + AluJb SINE Alu 11 114 -199 2929 71 3 3 chr2 6721224 6721577 -243966277 + THE1A LTR MaLR 3 355 0 1393 158 50 68 chr2 6721577 6721781 -243966073 + AluJb SINE Alu 114 313 0 638 236 54 7 chr2 6721789 6721937 -243965917 - MER58A DNA MER1_type -33 191 37 2089 172 9 78 chr2 6722286 6722533 -243965321 + MSTD LTR MaLR 1 208 -188 420 55 0 0 chr2 6722533 6722588 -243965266 + (CA)n Simple_repeat Simple_repeat 1 55 0 2089 172 9 78 chr2 6722588 6722765 -243965089 + MSTD LTR MaLR 208 396 0 2570 120 13 13 chr2 6723087 6723461 -243964393 - THE1C LTR MaLR -1 374 1 1561 219 22 35 chr2 6723461 6723824 -243964030 - MLT1A1 LTR MaLR -4 361 1 269 323 121 0 chr2 6724678 6724777 -243963077 + L3 LINE CR1 1373 1483 -94 625 245 41 41 chr2 6725760 6725956 -243961898 + MIR SINE MIR 46 241 -21 202 250 0 0 chr2 6725973 6726017 -243961837 - L2 LINE L2 -5 3308 3265 521 165 0 10 chr2 6726305 6726408 -243961446 + GA-rich Low_complexity Low_complexity 3 104 0 239 192 13 51 chr2 6727738 6727816 -243960038 + L1MC4 LINE L1 6615 6689 -1353 508 253 86 38 chr2 6727844 6728136 -243959718 - HAL1b LINE L1 -214 1134 829 243 347 0 24 chr2 6728138 6728262 -243959592 - L2 LINE L2 -942 2372 2252 30 69 0 0 chr2 6728720 6728778 -243959076 + AT_rich Low_complexity Low_complexity 1 58 0 5921 19 17 1 chr2 6728903 6729551 -243958303 - SVA Other Other -3 1383 726 2436 120 11 14 chr2 6729575 6729942 -243957912 - L1MA2 LINE L1 0 6304 5939 1312 252 132 12 chr2 6730440 6730857 -243956997 - MLT1C LTR MaLR 0 467 1 2307 116 34 45 chr2 6731476 6731636 -243956218 + THE1C LTR MaLR 1 161 -214 1963 153 7 0 chr2 6731636 6731924 -243955930 - AluSq SINE Alu -23 290 1 2307 116 34 45 chr2 6731924 6732142 -243955712 + THE1C LTR MaLR 161 375 0 26 30 0 0 chr2 6732250 6732283 -243955571 + AT_rich Low_complexity Low_complexity 1 33 0 2200 110 7 0 chr2 6733999 6734123 -243953731 + AluSg SINE Alu 1 123 -187 462 18 0 0 chr2 6734123 6734178 -243953676 + (CA)n Simple_repeat Simple_repeat 2 56 0 2200 110 7 0 chr2 6734178 6734361 -243953493 + AluSg SINE Alu 123 310 0 181 297 55 22 chr2 6734681 6734772 -243953082 + MIR SINE MIR 116 209 -53 2110 111 7 3 chr2 6734815 6735103 -243952751 - AluSx SINE Alu -23 289 1 798 222 94 35 chr2 6736214 6736496 -243951358 - MER33 DNA MER1_type -30 294 1 477 365 103 6 chr2 6736576 6736928 -243950926 - L2 LINE L2 -219 3053 2667 189 154 0 0 chr2 6737072 6737111 -243950743 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 451 278 156 15 chr2 6737167 6737372 -243950482 - MIR SINE MIR -27 235 2 232 297 61 10 chr2 6737571 6737707 -243950147 - MIR SINE MIR -54 154 20 22 0 0 0 chr2 6737874 6737896 -243949958 + AT_rich Low_complexity Low_complexity 1 22 0 377 272 47 22 chr2 6738087 6738265 -243949589 + MIR SINE MIR 19 192 -59 256 293 109 23 chr2 6738434 6738608 -243949246 - MIR SINE MIR -55 207 19 542 254 48 12 chr2 6739269 6739434 -243948420 + MIR SINE MIR 28 198 -64 1016 205 89 13 chr2 6743095 6743408 -243944446 - MER33 DNA MER1_type -7 317 1 422 201 82 50 chr2 6744396 6744524 -243943330 - MER53 DNA DNA -25 164 29 1820 100 37 0 chr2 6744524 6744765 -243943089 - AluSx SINE Alu -20 292 43 422 201 82 50 chr2 6744765 6744795 -243943059 - MER53 DNA DNA -160 29 1 288 326 106 49 chr2 6744911 6745401 -243942453 - L2 LINE L2 -17 3296 2778 1959 169 28 11 chr2 6745860 6746099 -243941755 - MLT1B LTR MaLR 0 390 141 2085 113 0 61 chr2 6746099 6746425 -243941429 + AluSp SINE Alu 1 306 -7 1959 169 28 11 chr2 6746425 6746547 -243941307 - MLT1B LTR MaLR -249 141 23 1558 216 218 4 chr2 6749485 6749975 -243937879 - L1MB8 LINE L1 -1 6177 5583 234 0 0 0 chr2 6750322 6750348 -243937506 + (T)n Simple_repeat Simple_repeat 1 26 0 293 215 83 50 chr2 6751134 6751255 -243936599 - MER96B DNA MER1_type? -261 156 32 217 225 0 0 chr2 6751285 6751325 -243936529 + L2 LINE L2 3266 3305 -8 299 293 41 23 chr2 6751667 6751805 -243936049 + MIR SINE MIR 5 143 -68 231 358 0 33 chr2 6753320 6753440 -243934414 - MIR SINE MIR -114 148 33 240 35 0 0 chr2 6754994 6755023 -243932831 + (CA)n Simple_repeat Simple_repeat 2 30 0 1806 146 55 78 chr2 6755375 6755759 -243932095 + THE1C LTR MaLR 1 375 0 395 301 30 15 chr2 6755787 6755920 -243931934 - MIR SINE MIR -71 191 57 393 66 279 0 chr2 6756505 6756566 -243931288 + MADE1 DNA Mariner 3 80 0 2197 98 24 0 chr2 6756722 6757019 -243930835 + AluSg SINE Alu 1 304 -6 952 199 0 31 chr2 6757057 6757253 -243930601 + AluJo SINE Alu 120 309 -3 205 357 29 0 chr2 6757929 6757999 -243929855 + MIR SINE MIR 17 88 -120 1147 305 96 43 chr2 6758351 6758386 -243929468 + L1M4 LINE L1 2884 2916 -3230 2268 113 3 3 chr2 6758386 6758696 -243929158 + AluY SINE Alu 1 310 -1 1147 305 96 43 chr2 6758696 6760040 -243927814 + L1M4 LINE L1 2916 4335 -1811 22 35 0 0 chr2 6760122 6760151 -243927703 + AT_rich Low_complexity Low_complexity 1 29 0 226 244 136 97 chr2 6760497 6760776 -243927078 + L1ME3A LINE L1 5681 5970 -200 756 20 29 0 chr2 6760968 6761070 -243926784 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 180 400 24 12 chr2 6763172 6763257 -243924597 - L2 LINE L2 -1 3271 3186 193 333 40 0 chr2 6763405 6763480 -243924374 + MIR SINE MIR 41 118 -90 238 315 54 50 chr2 6763675 6763975 -243923879 + L2 LINE L2 2858 3233 -39 437 263 112 16 chr2 6764643 6764829 -243923025 + MIR SINE MIR 45 250 -12 695 149 15 15 chr2 6765032 6765166 -243922688 + L1MB8 LINE L1 6044 6177 -1 187 352 193 0 chr2 6765347 6765492 -243922362 - L3 LINE CR1 -421 1156 984 241 366 77 11 chr2 6766265 6766448 -243921406 + MIR SINE MIR 62 256 -6 192 407 0 0 chr2 6766994 6767080 -243920774 + L2 LINE L2 3187 3272 0 190 299 43 17 chr2 6767603 6767720 -243920134 + MIR SINE MIR 27 146 -62 195 340 78 10 chr2 6768882 6768985 -243918869 - L2 LINE L2 -12 3260 3151 24 0 0 0 chr2 6770551 6770575 -243917279 + AT_rich Low_complexity Low_complexity 1 24 0 1523 234 45 52 chr2 6770713 6771178 -243916676 + MLT1C LTR MaLR 6 467 0 600 40 0 0 chr2 6771562 6771637 -243916217 + (TGG)n Simple_repeat Simple_repeat 2 76 0 950 265 71 58 chr2 6772374 6772702 -243915152 + MER77 LTR ERV1 281 673 -6 198 227 281 47 chr2 6772880 6773008 -243914846 + L2 LINE L2 3102 3259 -13 1268 206 27 108 chr2 6773130 6773537 -243914317 - MLT1A2 LTR MaLR 0 374 1 688 281 33 54 chr2 6774856 6775098 -243912756 + MIR SINE MIR 16 252 -10 3637 174 73 4 chr2 6775639 6776323 -243911531 + L1MB2 LINE L1 5439 6169 -2 223 362 122 31 chr2 6776340 6776594 -243911260 - L2 LINE L2 -61 3211 2935 555 191 19 0 chr2 6777419 6777581 -243910273 + GA-rich Low_complexity Low_complexity 2 166 0 406 275 74 11 chr2 6778010 6778080 -243909774 - MIR SINE MIR -16 246 182 2232 174 100 55 chr2 6778080 6778610 -243909244 + MLT2B3 LTR ERVL 1 554 0 406 275 74 11 chr2 6778610 6778728 -243909126 - MIR SINE MIR -80 182 46 2319 132 90 25 chr2 6778898 6779300 -243908554 + MSTA LTR MaLR 1 428 0 203 225 0 127 chr2 6779890 6779914 -243907940 - MER5A DNA MER1_type 0 189 164 2853 86 11 0 chr2 6779914 6780265 -243907589 - THE1A LTR MaLR 0 355 1 12201 96 5 10 chr2 6780265 6781853 -243906001 - THE1A-int LTR MaLR 0 1580 1 2818 91 11 0 chr2 6781853 6782204 -243905650 - THE1A LTR MaLR 0 355 1 203 225 0 127 chr2 6782204 6782248 -243905606 - MER5A DNA MER1_type -22 167 128 217 320 62 23 chr2 6782277 6782405 -243905449 + MER5A DNA MER1_type 55 187 -2 * 732 178 8 0 chr2 6782292 6782421 -243905433 - MER5A DNA MER1_type -59 130 1 395 242 6 19 chr2 6782745 6782902 -243904952 + (TA)n Simple_repeat Simple_repeat 1 155 0 210 353 118 0 chr2 6783400 6783519 -243904335 - L2 LINE L2 0 3313 3181 442 248 16 40 chr2 6783838 6783963 -243903891 - MER5A DNA MER1_type -64 125 4 368 255 101 13 chr2 6784563 6784712 -243903142 - LTR33 LTR ERVL -5 516 355 270 254 0 14 chr2 6785788 6785859 -243901995 + MIR SINE MIR 22 91 -117 1592 243 200 20 chr2 6786158 6786702 -243901152 - MLT1E1 LTR MaLR 0 654 13 5329 118 22 4 chr2 6787584 6788249 -243899605 - L1PA13 LINE L1 0 6163 5479 195 42 0 0 chr2 6788249 6788273 -243899581 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5329 118 22 4 chr2 6788273 6788411 -243899443 - L1PA13 LINE L1 -684 5479 5345 22 56 0 0 chr2 6789152 6789188 -243898666 + AT_rich Low_complexity Low_complexity 1 36 0 401 375 48 39 chr2 6789231 6789339 -243898515 - L2 LINE L2 -664 2650 2545 2223 107 7 3 chr2 6789339 6789648 -243898206 - AluSq SINE Alu -3 310 1 401 375 48 39 chr2 6789648 6789952 -243897902 - L2 LINE L2 -769 2545 2234 206 271 43 107 chr2 6790353 6790493 -243897361 + L2 LINE L2 2710 2840 -474 212 278 72 31 chr2 6790729 6790826 -243897028 - L2 LINE L2 -641 2673 2573 445 264 0 16 chr2 6790827 6790952 -243896902 - LTR67 LTR ERVL -2 555 433 189 322 252 9 chr2 6791799 6791914 -243895940 + MIR3 SINE MIR 46 188 -20 22 35 0 0 chr2 6792143 6792172 -243895682 + AT_rich Low_complexity Low_complexity 1 29 0 213 65 0 0 chr2 6793492 6793523 -243894331 + (CA)n Simple_repeat Simple_repeat 2 32 0 449 204 25 0 chr2 6794171 6794333 -243893521 + GA-rich Low_complexity Low_complexity 2 167 0 487 348 14 9 chr2 6796672 6796882 -243890972 + MIR SINE MIR 31 241 -21 1189 132 0 0 chr2 6797156 6797323 -243890531 + AluSg/x SINE Alu 131 297 -13 216 243 0 57 chr2 6798768 6798838 -243889016 + MIR SINE MIR 108 173 -89 300 262 138 28 chr2 6799148 6799293 -243888561 - MIR SINE MIR -70 192 32 208 284 27 54 chr2 6800603 6800677 -243887177 - MIR SINE MIR -59 149 78 222 298 18 0 chr2 6802149 6802206 -243885648 - MIR SINE MIR -59 149 92 188 292 106 18 chr2 6802644 6802757 -243885097 + MIR SINE MIR 85 207 -55 8057 213 48 37 chr2 6803131 6806986 -243880868 - L1MC1 LINE L1 0 6613 2801 2590 21 10 0 chr2 6806986 6807275 -243880579 - L1PA4 LINE L1 0 6155 5864 8057 213 48 37 chr2 6807275 6808785 -243879069 - L1MC1 LINE L1 -3812 2801 883 1702 197 43 70 chr2 6808785 6809226 -243878628 + MSTB1 LTR MaLR 4 432 0 8057 213 48 37 chr2 6809226 6810090 -243877764 - L1MC1 LINE L1 -5730 883 30 335 305 30 15 chr2 6810956 6811087 -243876767 - MIR SINE MIR -81 181 49 518 271 45 40 chr2 6813265 6813512 -243874342 + LTR16A LTR ERVL 203 450 0 183 331 96 45 chr2 6814088 6814266 -243873588 - L2 LINE L2 -512 2802 2616 198 0 0 0 chr2 6814677 6814699 -243873155 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 1266 184 53 26 chr2 6815046 6815312 -243872542 + AluJb SINE Alu 1 273 -39 316 325 88 18 chr2 6815799 6815913 -243871941 - MER5B DNA MER1_type -3 175 54 241 299 37 110 chr2 6815822 6815986 -243871868 + MER5A DNA MER1_type 38 189 0 * 2356 114 0 0 chr2 6816444 6816750 -243871104 + AluSp SINE Alu 1 306 -7 348 167 0 0 chr2 6816795 6816867 -243870987 + GA-rich Low_complexity Low_complexity 2 73 0 617 250 43 6 chr2 6816869 6817033 -243870821 + MIR SINE MIR 88 257 -5 300 329 71 52 chr2 6817065 6817530 -243870324 - L1MC4a LINE L1 -1914 5894 5421 227 173 19 0 chr2 6817767 6817819 -243870035 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 245 298 25 0 chr2 6817841 6817962 -243869892 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 243 256 61 24 chr2 6818130 6818212 -243869642 + MIR SINE MIR 62 146 -62 258 295 40 0 chr2 6818311 6818410 -243869444 - MIR SINE MIR -88 120 47 22 35 0 0 chr2 6818648 6818677 -243869177 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 6819995 6820016 -243867838 + AT_rich Low_complexity Low_complexity 1 21 0 482 225 152 67 chr2 6820608 6821086 -243866768 + LTR50 LTR ERVL 9 605 -190 340 184 38 0 chr2 6821105 6821192 -243866662 + LTR50 LTR ERVL 435 795 0 647 262 50 54 chr2 6824359 6824657 -243863197 + MER102b DNA MER1_type 37 333 -8 305 222 69 56 chr2 6824949 6825093 -243862761 + L1M4 LINE L1 4129 4274 -1872 283 302 167 49 chr2 6825107 6825505 -243862349 - L2 LINE L2 0 3313 2779 711 281 84 39 chr2 6825608 6826024 -243861830 + LTR16A LTR ERVL 7 441 -9 709 292 112 4 chr2 6826164 6826397 -243861457 - L2 LINE L2 -987 2327 2070 378 329 42 42 chr2 6826428 6826741 -243861113 + L1ME3A LINE L1 5635 5947 -223 1885 139 14 0 chr2 6826876 6827189 -243860665 - AluSx SINE Alu 0 317 1 473 338 29 10 chr2 6827416 6827620 -243860234 - MIR SINE MIR -24 238 31 223 265 60 0 chr2 6827994 6828077 -243859777 - MIR3 SINE MIR -21 187 100 579 267 28 17 chr2 6828114 6828290 -243859564 - MER5B DNA MER1_type 0 178 1 1330 202 5 5 chr2 6828685 6828908 -243858946 - MER58A DNA MER1_type 0 224 2 2025 124 0 0 chr2 6830038 6830355 -243857499 + AluSx SINE Alu 16 332 0 408 336 36 54 chr2 6830680 6830957 -243856897 - L2 LINE L2 0 3272 3001 297 362 52 24 chr2 6833105 6833315 -243854539 + MIR SINE MIR 47 262 0 1735 145 69 0 chr2 6833358 6833648 -243854206 + THE1B LTR MaLR 1 310 -54 674 124 0 0 chr2 6833648 6833745 -243854109 + AluY SINE Alu 213 309 -2 566 69 0 0 chr2 6833748 6833820 -243854034 + THE1B LTR MaLR 293 364 0 198 91 0 0 chr2 6834460 6834493 -243853361 + (CA)n Simple_repeat Simple_repeat 1 33 0 1986 110 43 17 chr2 6835178 6835511 -243852343 - AluSc SINE Alu 0 341 1 442 258 11 84 chr2 6835543 6835721 -243852133 - MLT1J1 LTR MaLR -236 210 46 32 57 0 0 chr2 6836486 6836539 -243851315 + AT_rich Low_complexity Low_complexity 1 53 0 2028 130 0 13 chr2 6836953 6837253 -243850601 - AluSx SINE Alu -16 296 1 372 347 103 9 chr2 6837634 6837847 -243850007 - MIR SINE MIR -10 252 20 701 256 137 27 chr2 6838109 6838371 -243849483 - LTR40a LTR ERVL -120 399 109 345 309 112 15 chr2 6838618 6838958 -243848896 + L1ME4a LINE L1 5542 5914 -207 2071 98 0 17 chr2 6839414 6839746 -243848108 - AluY SINE Alu 0 327 1 196 341 93 37 chr2 6839909 6840155 -243847699 + L2 LINE L2 2834 3093 -179 927 209 82 19 chr2 6842956 6843162 -243844692 + MER20 DNA MER1_type 1 219 0 292 280 41 113 chr2 6843163 6843367 -243844487 - MIR SINE MIR -40 168 11 271 175 16 63 chr2 6844872 6844935 -243842919 - L2 LINE L2 -7 3265 3206 389 352 6 0 chr2 6845974 6846153 -243841701 + (TG)n Simple_repeat Simple_repeat 1 180 0 204 230 169 80 chr2 6847155 6847368 -243840486 + MIR SINE MIR 3 234 -28 23 54 0 0 chr2 6847659 6847696 -243840158 + AT_rich Low_complexity Low_complexity 1 37 0 534 211 0 10 chr2 6847829 6847933 -243839921 + MER63 DNA MER1_type 21 749 -313 1762 161 10 3 chr2 6849213 6849504 -243838350 - AluSx SINE Alu -19 293 1 244 135 0 0 chr2 6849504 6849541 -243838313 + MSTB LTR MaLR 386 422 -4 271 282 51 26 chr2 6849579 6849696 -243838158 - L1ME LINE L1 -409 5712 5593 192 236 55 0 chr2 6849952 6850007 -243837847 + L2 LINE L2 3254 3311 -2 1810 197 120 63 chr2 6850339 6850897 -243836957 - L1MD2 LINE L1 -10 6743 6154 1951 215 19 74 chr2 6850972 6851748 -243836106 - L1MD2 LINE L1 -488 6148 5402 6938 239 87 42 chr2 6852012 6853113 -243834741 - L1MD2 LINE L1 -1302 5238 4188 6452 103 24 1 chr2 6853113 6854096 -243833758 + L1PA10 LINE L1 5158 6163 -5 6938 239 87 42 chr2 6854096 6856353 -243831501 - L1MD2 LINE L1 -2352 4188 1626 2432 66 7 0 chr2 6856353 6856654 -243831200 + AluY SINE Alu 1 303 -8 6938 239 87 42 chr2 6856654 6857749 -243830105 - L1MD2 LINE L1 -4914 1626 582 207 0 0 0 chr2 6858359 6858382 -243829472 + (T)n Simple_repeat Simple_repeat 1 23 0 28 48 0 0 chr2 6858672 6858714 -243829140 + AT_rich Low_complexity Low_complexity 1 42 0 2431 69 0 0 chr2 6858947 6859235 -243828619 - AluY SINE Alu -12 299 12 365 283 75 100 chr2 6859243 6859632 -243828222 - MLT1J LTR MaLR -132 379 1 987 105 0 0 chr2 6859952 6860085 -243827769 - L1MA3 LINE L1 0 6305 6173 552 81 35 0 chr2 6860016 6860107 -243827747 - L1MA3 LINE L1 -63 6241 6134 2289 105 0 13 chr2 6862194 6862507 -243825347 + AluSg SINE Alu 1 309 -1 429 302 166 27 chr2 6862820 6863158 -243824696 + MLT1I LTR MaLR 19 403 -6 212 344 21 52 chr2 6863221 6863413 -243824441 - MIR SINE MIR -71 191 6 2459 77 0 0 chr2 6863613 6863924 -243823930 + AluY SINE Alu 1 311 0 2332 149 22 75 chr2 6866821 6867312 -243820542 + MLT1C LTR MaLR 1 465 -2 240 254 0 30 chr2 6869251 6869318 -243818536 + GA-rich Low_complexity Low_complexity 1 65 0 2190 105 3 35 chr2 6869769 6870084 -243817770 + AluSx SINE Alu 1 305 -7 323 236 25 70 chr2 6870477 6870634 -243817220 + L1M4 LINE L1 3077 3226 -2920 314 344 133 16 chr2 6870663 6871099 -243816755 + L1M4 LINE L1 4005 4491 -1655 257 255 213 58 chr2 6872027 6872215 -243815639 + L2 LINE L2 989 1205 -2109 10163 206 52 15 chr2 6872386 6873517 -243814337 + L1 LINE L1 2220 3308 -2838 1631 170 19 47 chr2 6873517 6873835 -243814019 + AluJb SINE Alu 1 309 -3 10163 206 52 15 chr2 6873835 6875202 -243812652 + L1 LINE L1 3308 4810 -1336 788 148 0 0 chr2 6875203 6875338 -243812516 + L1 LINE L1 3625 3759 -2387 227 205 0 0 chr2 6875357 6875396 -243812458 - AluJ/monomer SINE Alu -262 40 2 2959 220 59 7 chr2 6875398 6876140 -243811714 + L1MD2 LINE L1 5576 6356 -3 3211 264 105 27 chr2 6876169 6878074 -243809780 + L1ME1 LINE L1 2362 4410 -1805 2723 221 71 60 chr2 6878084 6878573 -243809281 + L1ME1 LINE L1 4805 5287 -948 195 42 0 0 chr2 6878573 6878597 -243809257 + (TA)n Simple_repeat Simple_repeat 2 25 0 2723 221 71 60 chr2 6878597 6879173 -243808681 + L1ME1 LINE L1 5287 5898 -337 2360 124 23 3 chr2 6879173 6879527 -243808327 + THE1B LTR MaLR 4 364 0 2723 221 71 60 chr2 6879527 6879861 -243807993 + L1ME1 LINE L1 5898 6227 -8 956 113 17 17 chr2 6879976 6880018 -243807836 + (GGAA)n Simple_repeat Simple_repeat 1 219 0 956 113 17 17 chr2 6880018 6880195 -243807659 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 961 129 23 4 chr2 6880455 6880678 -243807176 + GA-rich Low_complexity Low_complexity 3 228 0 531 103 19 37 chr2 6880678 6880785 -243807069 + (GAAAA)n Simple_repeat Simple_repeat 4 108 0 221 320 0 27 chr2 6882247 6882322 -243805532 + L2 LINE L2 3190 3262 -10 212 234 0 0 chr2 6882380 6882427 -243805427 + (TG)n Simple_repeat Simple_repeat 2 48 0 506 257 33 26 chr2 6883194 6883346 -243804508 - MIR SINE MIR -46 216 64 23 33 0 0 chr2 6883367 6883397 -243804457 + AT_rich Low_complexity Low_complexity 1 30 0 808 282 32 70 chr2 6883803 6884215 -243803639 + L2 LINE L2 2915 3310 -3 2747 208 10 32 chr2 6884428 6884609 -243803245 + L1MC1 LINE L1 4982 5166 -1167 1991 109 40 0 chr2 6884609 6884885 -243802969 + AluSx SINE Alu 13 299 -13 2747 208 10 32 chr2 6884885 6885527 -243802327 + L1MC1 LINE L1 5166 5916 -417 630 331 71 21 chr2 6885528 6885857 -243801997 - MLT1G LTR MaLR -289 301 1 1271 266 35 36 chr2 6885982 6886368 -243801486 + L1M4 LINE L1 2971 3357 -2789 2242 89 0 20 chr2 6886368 6886672 -243801182 - AluY SINE Alu -13 298 1 1271 266 35 36 chr2 6886672 6886916 -243800938 + L1M4 LINE L1 3357 3600 -2546 305 221 0 11 chr2 6886916 6887011 -243800843 + (TA)n Simple_repeat Simple_repeat 1 94 0 818 94 109 0 chr2 6887012 6887140 -243800714 + AluY SINE Alu 39 180 -131 30 83 0 0 chr2 6887140 6887176 -243800678 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 6887235 6887260 -243800594 + AT_rich Low_complexity Low_complexity 1 25 0 261 0 0 0 chr2 6887272 6887301 -243800553 + (TA)n Simple_repeat Simple_repeat 1 29 0 841 227 14 5 chr2 6887359 6887566 -243800288 - L1ME1 LINE L1 -223 5943 5735 959 126 0 0 chr2 6887717 6887868 -243799986 + L1PA15 LINE L1 6011 6161 -4 262 89 18 18 chr2 6888987 6889043 -243798811 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 276 250 29 0 chr2 6889243 6889311 -243798543 - MIR SINE MIR -108 154 85 2037 183 22 79 chr2 6890427 6890920 -243796934 - MLT1C LTR MaLR 0 467 3 220 236 0 18 chr2 6891356 6891411 -243796443 + A-rich Low_complexity Low_complexity 2 55 0 184 183 300 0 chr2 6892015 6892075 -243795779 + L2 LINE L2 3204 3281 -32 195 100 0 0 chr2 6892142 6892172 -243795682 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 3076 176 64 3 chr2 6892313 6893084 -243794770 + L1M2 LINE L1 4673 5496 -743 494 170 7 35 chr2 6893226 6893367 -243794487 + GA-rich Low_complexity Low_complexity 2 138 0 402 299 75 31 chr2 6894901 6895185 -243792669 - L1MDa LINE L1 -3854 2686 2395 2269 171 15 20 chr2 6895582 6896066 -243791788 - Tigger2 DNA MER2_type 0 2718 2 881 158 23 0 chr2 6896400 6896577 -243791277 - L1MA7 LINE L1 0 6291 6111 243 384 31 40 chr2 6896935 6897159 -243790695 - L1MDa LINE L1 -5476 1054 833 315 0 0 0 chr2 6897502 6897537 -243790317 + (CA)n Simple_repeat Simple_repeat 2 36 0 231 125 0 0 chr2 6897537 6897577 -243790277 + (GA)n Simple_repeat Simple_repeat 1 40 0 475 245 21 75 chr2 6898137 6898325 -243789529 - MLT1J LTR MaLR -31 480 303 237 345 63 21 chr2 6898833 6898975 -243788879 + MIR SINE MIR 21 168 -94 203 314 144 0 chr2 6899449 6899567 -243788287 + L2 LINE L2 3179 3313 0 2012 147 3 0 chr2 6900869 6901162 -243786692 - AluSx SINE Alu -18 294 1 230 277 50 0 chr2 6901165 6901284 -243786570 - L1ME LINE L1 -230 5891 5767 1660 227 164 41 chr2 6901770 6902449 -243785405 + LTR41 LTR ERVL 1 762 -11 21 0 0 0 chr2 6902758 6902779 -243785075 + AT_rich Low_complexity Low_complexity 1 21 0 648 286 6 6 chr2 6902939 6903121 -243784733 + MER58A DNA MER1_type 43 224 0 329 350 127 0 chr2 6903247 6903467 -243784387 + MIR SINE MIR 2 249 -13 188 262 66 16 chr2 6903520 6903581 -243784273 - MIR SINE MIR -188 74 11 1413 211 156 70 chr2 6903827 6904429 -243783425 + MLT1E1 LTR MaLR 1 654 0 1894 262 44 30 chr2 6905092 6905702 -243782152 - MLT1E2 LTR MaLR -7 619 1 206 391 64 9 chr2 6906939 6907049 -243780805 + L2 LINE L2 3137 3252 -20 241 367 143 35 chr2 6909286 6909711 -243778143 - L2 LINE L2 -661 2653 2183 204 286 18 0 chr2 6910413 6910469 -243777385 + MER5A DNA MER1_type 9 65 -124 28 29 0 0 chr2 6910911 6910946 -243776908 + AT_rich Low_complexity Low_complexity 1 35 0 216 256 105 12 chr2 6912304 6912390 -243775464 - MIR SINE MIR -61 147 54 295 263 12 12 chr2 6913322 6913402 -243774452 - MIR3 SINE MIR -31 177 98 21 36 0 0 chr2 6914711 6914739 -243773115 + AT_rich Low_complexity Low_complexity 1 28 0 2437 88 3 3 chr2 6916018 6916325 -243771529 - AluSq SINE Alu -6 307 1 343 333 62 23 chr2 6916436 6916613 -243771241 + MIR SINE MIR 46 229 -33 588 197 79 17 chr2 6916809 6916987 -243770867 - MER53 DNA DNA 0 189 1 1938 145 26 57 chr2 6917527 6917913 -243769941 - THE1C LTR MaLR -1 374 1 2281 113 0 3 chr2 6918430 6918731 -243769123 + AluSx SINE Alu 1 300 -12 462 157 0 0 chr2 6919258 6919341 -243768513 + CT-rich Low_complexity Low_complexity 2 84 0 3041 82 42 5 chr2 6919430 6919858 -243767996 - MLT2A1 LTR ERVL 0 444 1 1552 232 132 5 chr2 6919885 6920333 -243767521 - MLT1D LTR MaLR 0 505 1 1821 161 3 25 chr2 6921089 6921405 -243766449 + AluSx SINE Alu 1 309 -3 438 215 27 102 chr2 6921661 6921847 -243766007 - MER69A DNA AcHobo 0 177 6 474 224 5 170 chr2 6921952 6922175 -243765679 + MER5A DNA MER1_type 1 186 -3 5541 62 19 27 chr2 6923089 6923861 -243763993 + MER4E LTR ERV1 1 766 0 1774 225 66 4 chr2 6925095 6925567 -243762287 - L1MC2 LINE L1 -18 6326 5826 2237 242 21 5 chr2 6925574 6926226 -243761628 - L1MC2 LINE L1 -943 5203 4541 351 100 43 0 chr2 6926237 6926307 -243761547 + (TA)n Simple_repeat Simple_repeat 2 74 0 448 104 0 0 chr2 6926365 6926432 -243761422 - L1PA5 LINE L1 -6 6148 6082 2000 24 8 0 chr2 6926432 6926679 -243761175 + L1P2 LINE L1 5369 5617 -537 * 5296 264 22 17 chr2 6926673 6928697 -243759157 - L1MC2 LINE L1 -1589 4557 2524 487 371 79 21 chr2 6929041 6929459 -243758395 - L2 LINE L2 -794 2520 2079 2702 101 15 2 chr2 6929986 6930383 -243757471 - L1MA1 LINE L1 -9 6293 5892 2155 261 69 28 chr2 6930509 6931637 -243756217 - L1ME1 LINE L1 -80 6086 4913 2105 121 3 13 chr2 6933089 6933403 -243754451 - AluY SINE Alu 0 311 1 416 317 194 30 chr2 6934756 6935188 -243752666 - L2 LINE L2 -7 3306 2804 2263 122 42 11 chr2 6935193 6935546 -243752308 - THE1B LTR MaLR 0 364 1 2795 161 73 19 chr2 6935654 6936299 -243751555 + L1MB3 LINE L1 5497 6176 -7 248 258 39 62 chr2 6936305 6936433 -243751421 - L2 LINE L2 -609 2705 2581 694 309 69 69 chr2 6936474 6936584 -243751270 - L2 LINE L2 -1504 1810 1701 207 0 0 0 chr2 6936584 6936607 -243751247 + (TG)n Simple_repeat Simple_repeat 1 23 0 694 309 69 69 chr2 6936607 6937078 -243750776 - L2 LINE L2 -1612 1702 1229 188 244 0 0 chr2 6937093 6937134 -243750720 - MIR SINE MIR -71 191 151 188 217 206 33 chr2 6937315 6937407 -243750447 - MIR SINE MIR -141 121 14 5290 160 10 15 chr2 6938334 6939501 -243748353 + L1MA4 LINE L1 5129 6289 -11 260 212 182 15 chr2 6939633 6939765 -243748089 + L1ME LINE L1 5492 5645 -476 295 250 0 0 chr2 6940172 6940240 -243747614 + MIR SINE MIR 176 243 -19 274 221 26 26 chr2 6940322 6940399 -243747455 + CT-rich Low_complexity Low_complexity 3 79 0 23 0 0 0 chr2 6941602 6941625 -243746229 + AT_rich Low_complexity Low_complexity 1 23 0 190 230 46 92 chr2 6941744 6941831 -243746023 + L2 LINE L2 3231 3313 0 201 356 53 53 chr2 6941911 6942043 -243745811 + L2 LINE L2 3137 3268 -4 1283 226 3 66 chr2 6943167 6943485 -243744369 + AluJb SINE Alu 14 311 -1 474 274 48 12 chr2 6943850 6944018 -243743836 + MLT1I LTR MaLR 201 374 -35 480 198 0 0 chr2 6944020 6944101 -243743753 - FLAM_A SINE Alu -36 106 26 1257 226 54 11 chr2 6944253 6944603 -243743251 - MLT1A1 LTR MaLR 0 365 1 349 309 147 6 chr2 6945308 6945507 -243742347 - MIR SINE MIR -11 251 27 3448 38 38 0 chr2 6945687 6946138 -243741716 + L1P LINE L1 4545 5012 -1134 7657 148 11 46 chr2 6947427 6948911 -243738943 - THE1C-int LTR MaLR -145 1435 4 1761 144 79 20 chr2 6948914 6949268 -243738586 - THE1C LTR MaLR 0 375 1 326 296 82 60 chr2 6949624 6949857 -243737997 + MIR SINE MIR 20 257 -5 1421 248 86 9 chr2 6949893 6950348 -243737506 - MLT1E2 LTR MaLR 0 626 137 182 269 31 125 chr2 6950512 6950672 -243737182 + MIR SINE MIR 68 212 -50 26 0 0 0 chr2 6950805 6950831 -243737023 + AT_rich Low_complexity Low_complexity 1 26 0 12878 167 56 10 chr2 6950832 6956789 -243731065 - L1PB1 LINE L1 -1 6866 636 994 183 5 0 chr2 6956791 6956988 -243730866 - L1PB1 LINE L1 -6663 200 3 184 315 0 19 chr2 6957525 6957579 -243730275 + MIR SINE MIR 23 75 -187 217 320 57 41 chr2 6957878 6958000 -243729854 - MIR SINE MIR -137 125 2 1379 246 47 27 chr2 6959335 6959783 -243728071 + LTR40b LTR ERVL 6 462 0 290 215 31 0 chr2 6959845 6959910 -243727944 + HERVL40 LTR ERVL 2830 2896 -2634 845 265 13 22 chr2 6961000 6961331 -243726523 + HERVL40 LTR ERVL 2779 5505 -25 1107 276 63 15 chr2 6961353 6961763 -243726091 + LTR40b LTR ERVL 1 430 -32 433 257 138 84 chr2 6961787 6962083 -243725771 + L2 LINE L2 2994 3305 -8 2238 119 0 0 chr2 6963581 6963875 -243723979 + AluSg SINE Alu 1 294 -16 312 296 136 12 chr2 6964130 6964299 -243723555 - L1ME2 LINE L1 -226 5938 5749 201 262 0 0 chr2 6966112 6966154 -243721700 + T-rich Low_complexity Low_complexity 3 44 0 662 311 19 0 chr2 6967138 6967350 -243720504 - MIR SINE MIR 0 262 47 364 355 11 26 chr2 6968325 6968514 -243719340 - MER5A DNA MER1_type -3 186 1 1385 259 25 57 chr2 6968968 6969701 -243718153 - L1M4 LINE L1 -2203 4179 3471 2111 132 0 0 chr2 6969880 6970168 -243717686 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr2 6970193 6970226 -243717628 + AT_rich Low_complexity Low_complexity 1 33 0 334 246 165 50 chr2 6970226 6970455 -243717399 - L1ME LINE L1 -5477 593 329 186 43 0 0 chr2 6970455 6970478 -243717376 + (TTCTC)n Simple_repeat Simple_repeat 2 24 0 334 246 165 50 chr2 6970478 6970508 -243717346 - L1ME LINE L1 -5741 329 304 490 281 25 20 chr2 6970520 6970716 -243717138 - L1ME LINE L1 -5867 203 7 245 325 17 38 chr2 6970804 6971044 -243716810 - L1MEc LINE L1 -4781 1436 1202 1191 218 128 22 chr2 6971054 6971421 -243716433 + LTR52 LTR ERVL 1 406 -15 375 336 40 57 chr2 6971530 6972695 -243715159 - L1MEc LINE L1 -5176 1220 76 425 224 9 9 chr2 6973205 6973312 -243714542 + L1M4 LINE L1 4898 5004 -1142 224 308 112 65 chr2 6973463 6973632 -243714222 - L2 LINE L2 -158 3114 2938 248 230 143 0 chr2 6974567 6974693 -243713161 + L1ME4a LINE L1 5977 6120 -1 32 86 0 0 chr2 6974743 6974824 -243713030 + AT_rich Low_complexity Low_complexity 1 81 0 467 89 0 13 chr2 6975636 6975715 -243712139 + (GA)n Simple_repeat Simple_repeat 1 78 0 875 186 94 144 chr2 6975715 6976096 -243711758 - MLT1A1 LTR MaLR -3 362 1 218 200 0 20 chr2 6976096 6976146 -243711708 + GA-rich Low_complexity Low_complexity 1 49 0 1431 50 0 0 chr2 6976187 6976367 -243711487 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 243 88 0 0 chr2 6976367 6976401 -243711453 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 295 250 0 93 chr2 6977395 6977456 -243710398 - L2 LINE L2 -38 3275 3227 2074 169 25 0 chr2 6977456 6977810 -243710044 + THE1B LTR MaLR 2 364 0 295 250 0 93 chr2 6977810 6977856 -243709998 - L2 LINE L2 -86 3227 3178 206 337 11 11 chr2 6978215 6978310 -243709544 - L2 LINE L2 -571 2743 2649 1776 181 68 32 chr2 6978551 6978992 -243708862 - LTR2B LTR ERV1 0 490 34 955 322 123 4 chr2 6979374 6979828 -243708026 + L2 LINE L2 2208 2715 -599 21 36 0 0 chr2 6979829 6979857 -243707997 + AT_rich Low_complexity Low_complexity 1 28 0 301 349 90 42 chr2 6980265 6980454 -243707400 - L2 LINE L2 0 3272 3075 359 195 0 12 chr2 6981011 6981093 -243706761 - L1MA5 LINE L1 -6 6294 6214 1297 194 3 3 chr2 6981093 6981377 -243706477 + L1 LINE L1 4960 5243 -903 183 333 0 0 chr2 6982693 6982756 -243705098 + L2 LINE L2 3176 3238 -75 5290 66 25 29 chr2 6984427 6985196 -243702658 - MER4E LTR ERV1 0 766 1 561 240 5 163 chr2 6986107 6986328 -243701526 - MER5A DNA MER1_type -3 186 1 430 192 30 114 chr2 6986433 6986600 -243701254 + MER69A DNA AcHobo 6 158 -19 429 137 26 0 chr2 6986643 6986760 -243701094 + (TA)n Simple_repeat Simple_repeat 1 120 0 208 356 0 11 chr2 6987044 6987134 -243700720 + L2 LINE L2 3213 3301 -12 358 328 78 10 chr2 6987216 6987420 -243700434 - MIR SINE MIR -39 223 6 2328 105 3 0 chr2 6987457 6987761 -243700093 + AluSp SINE Alu 4 308 -5 525 142 35 0 chr2 6988739 6988908 -243698946 + (TA)n Simple_repeat Simple_repeat 2 176 0 35 0 0 0 chr2 6988911 6988946 -243698908 + AT_rich Low_complexity Low_complexity 1 35 0 192 300 125 33 chr2 6991146 6991266 -243696588 - L2 LINE L2 -4 3268 3138 23 0 0 0 chr2 6991467 6991490 -243696364 + AT_rich Low_complexity Low_complexity 1 23 0 225 191 0 0 chr2 6992065 6992107 -243695747 + (CA)n Simple_repeat Simple_repeat 2 43 0 1991 147 7 0 chr2 6992793 6993086 -243694768 - AluSx SINE Alu -17 295 1 730 242 28 22 chr2 6993175 6993357 -243694497 + MER5A DNA MER1_type 1 183 -6 472 139 13 0 chr2 6993995 6994074 -243693780 + MADE1 DNA Mariner 1 80 0 196 333 26 9 chr2 6994118 6994232 -243693622 - MIR3 SINE MIR -6 202 87 427 287 187 5 chr2 6994404 6994613 -243693241 - Charlie8 DNA MER1_type -2161 256 10 341 333 0 0 chr2 6994956 6995046 -243692808 - MER5B DNA MER1_type -25 153 64 21 0 0 0 chr2 6995846 6995867 -243691987 + AT_rich Low_complexity Low_complexity 1 21 0 721 315 58 46 chr2 6996210 6996626 -243691228 - L2 LINE L2 -804 2510 2090 225 180 0 0 chr2 6996639 6996689 -243691165 + (TA)n Simple_repeat Simple_repeat 2 51 0 194 284 149 0 chr2 6996692 6996826 -243691028 + L2 LINE L2 3098 3251 -62 1568 307 109 42 chr2 6996974 6998404 -243689450 + L1ME3A LINE L1 3806 5331 -815 252 347 10 15 chr2 6998437 6998633 -243689221 + L1P5 LINE L1 5378 5572 -584 442 321 141 17 chr2 6998647 6998946 -243688908 + L1ME3A LINE L1 5619 5954 -216 3085 129 18 60 chr2 6999355 6999905 -243687949 - MER1A DNA MER1_type 0 527 1 683 314 9 14 chr2 7000957 7001177 -243686677 + MIR SINE MIR 31 249 -13 228 35 0 0 chr2 7002396 7002425 -243685429 + (TG)n Simple_repeat Simple_repeat 1 29 0 2085 149 21 21 chr2 7002799 7003174 -243684680 - THE1C LTR MaLR 0 375 1 379 292 35 70 chr2 7003577 7003892 -243683962 - L1ME LINE L1 -335 5786 5483 258 150 0 0 chr2 7004602 7004642 -243683212 + L2 LINE L2 3255 3294 -19 1112 153 0 0 chr2 7005189 7005373 -243682481 - AluSg/x SINE Alu 0 314 131 295 266 53 72 chr2 7005527 7005734 -243682120 - MLT1I LTR MaLR -16 393 191 327 49 0 0 chr2 7006001 7006042 -243681812 + (TC)n Simple_repeat Simple_repeat 1 41 0 246 32 0 0 chr2 7006041 7006072 -243681782 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 2160 113 0 7 chr2 7006751 7007043 -243680811 + AluSg SINE Alu 1 290 -20 255 292 0 21 chr2 7007130 7007226 -243680628 - MLT1J LTR MaLR -145 366 273 228 300 11 11 chr2 7007287 7007377 -243680477 - MLT1L LTR MaLR -354 261 172 1861 131 34 14 chr2 7007405 7007696 -243680158 - AluJo SINE Alu -4 308 12 510 295 62 29 chr2 7007836 7008077 -243679777 + MIR SINE MIR 2 250 -12 376 319 223 15 chr2 7008435 7009021 -243678833 + L2 LINE L2 2593 3308 -5 276 335 63 13 chr2 7010155 7010313 -243677541 - MIR SINE MIR -75 187 22 647 143 9 9 chr2 7010448 7010560 -243677294 - AluSg/x SINE Alu -12 300 189 1235 178 36 112 chr2 7011356 7011749 -243676105 + MLT1A1 LTR MaLR 3 365 0 360 229 201 14 chr2 7011882 7012026 -243675828 + MIR SINE MIR 22 192 -70 208 361 0 10 chr2 7015681 7015778 -243672076 + L2 LINE L2 3168 3263 -50 522 284 36 105 chr2 7016035 7016397 -243671457 + MLT1I LTR MaLR 71 407 -2 227 315 120 9 chr2 7016747 7016855 -243670999 - L2 LINE L2 0 3313 3194 632 228 55 22 chr2 7016860 7017042 -243670812 + MER3 DNA MER1_type 1 141 -68 309 281 110 44 chr2 7017280 7017597 -243670257 - L2 LINE L2 -126 3187 2850 25 31 0 0 chr2 7017906 7017938 -243669916 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr2 7018650 7018682 -243669172 + AT_rich Low_complexity Low_complexity 1 32 0 1609 196 7 4 chr2 7018684 7018965 -243668889 - AluJo SINE Alu -30 282 1 305 248 137 0 chr2 7020970 7021087 -243666767 + L2 LINE L2 2060 2192 -1122 839 287 90 61 chr2 7021196 7021240 -243666614 + L2 LINE L2 2575 2616 -697 1032 269 108 70 chr2 7021240 7021767 -243666087 + MLT1H LTR MaLR 1 547 -2 839 287 90 61 chr2 7021767 7022430 -243665424 + L2 LINE L2 2616 3313 0 2163 140 33 36 chr2 7022544 7022908 -243664946 - THE1B LTR MaLR -1 363 1 22 0 0 0 chr2 7023044 7023066 -243664788 + AT_rich Low_complexity Low_complexity 1 22 0 525 324 155 44 chr2 7023358 7024205 -243663649 + L3 LINE CR1 634 1574 -3 495 348 79 12 chr2 7024549 7024802 -243663052 + L3 LINE CR1 364 633 -944 382 279 82 123 chr2 7024961 7025061 -243662793 + L3 LINE CR1 931 1034 -543 2044 126 0 3 chr2 7025061 7025346 -243662508 + AluSc SINE Alu 1 284 -25 315 0 0 0 chr2 7025350 7025385 -243662469 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 382 279 82 123 chr2 7025385 7025620 -243662234 + L3 LINE CR1 1037 1257 -320 266 283 57 9 chr2 7027595 7027701 -243660153 - MIR SINE MIR -47 215 105 429 305 92 17 chr2 7027863 7028037 -243659817 - MIR SINE MIR -28 234 48 271 396 35 30 chr2 7029588 7029757 -243658097 + MIR3 SINE MIR 8 177 -31 248 323 32 0 chr2 7029970 7030063 -243657791 - MIR SINE MIR -76 186 91 230 252 50 59 chr2 7030388 7030507 -243657347 - MIR SINE MIR -29 233 116 328 278 56 76 chr2 7030661 7030963 -243656891 + MLT1I LTR MaLR 97 392 -17 27 22 0 22 chr2 7031190 7031211 -243656643 + AT_rich Low_complexity Low_complexity 1 21 -23 2205 97 7 0 chr2 7031211 7031500 -243656354 - AluSg SINE Alu -19 291 1 27 22 0 22 chr2 7031500 7031523 -243656331 + AT_rich Low_complexity Low_complexity 21 44 0 373 324 9 0 chr2 7032196 7032307 -243655547 + MER81 DNA DNA 3 114 0 364 273 23 0 chr2 7032602 7032690 -243655164 + MER5B DNA MER1_type 17 106 -72 184 308 0 0 chr2 7032747 7032799 -243655055 + MER5B DNA MER1_type 126 177 -1 2677 215 21 57 chr2 7033940 7034567 -243653287 + MER77 LTR ERV1 2 605 0 2130 149 41 3 chr2 7034592 7034934 -243652920 - THE1A LTR MaLR 0 355 1 12009 106 11 0 chr2 7034934 7036496 -243651358 - THE1A-int LTR MaLR 0 1580 1 2423 119 35 6 chr2 7036497 7036841 -243651013 - THE1A LTR MaLR -1 354 1 651 291 29 107 chr2 7037554 7038076 -243649778 + MER34 LTR ERV1 1 481 -61 1371 186 41 11 chr2 7038182 7038451 -243649403 - AluJb SINE Alu -24 288 12 2653 108 6 0 chr2 7038451 7038804 -243649050 - THE1A LTR MaLR 0 355 1 12322 95 10 1 chr2 7038804 7040368 -243647486 - THE1A-int LTR MaLR 0 1580 3 2544 108 35 3 chr2 7040370 7040714 -243647140 - THE1A LTR MaLR 0 355 1 1706 178 3 3 chr2 7041958 7042244 -243645610 - AluJb SINE Alu -11 301 16 198 288 51 0 chr2 7042444 7042503 -243645351 + L2 LINE L2 3252 3313 0 218 377 28 0 chr2 7043182 7043288 -243644566 - L2 LINE L2 -5 3308 3200 249 128 0 0 chr2 7043688 7043735 -243644119 + (TG)n Simple_repeat Simple_repeat 2 48 0 287 319 109 57 chr2 7044085 7044471 -243643383 - L2 LINE L2 -8 3305 2900 21 0 0 0 chr2 7045023 7045044 -243642810 + AT_rich Low_complexity Low_complexity 1 21 0 221 160 0 20 chr2 7045285 7045335 -243642519 + CT-rich Low_complexity Low_complexity 3 51 0 914 280 114 15 chr2 7045392 7046001 -243641853 - L1ME3A LINE L1 -226 5944 5262 2140 131 111 57 chr2 7046077 7046483 -243641371 - MSTA LTR MaLR 0 428 1 1562 226 30 117 chr2 7046870 7047709 -243640145 - L1ME3A LINE L1 -1483 4663 3898 4263 165 20 17 chr2 7047709 7048424 -243639430 + MER50 LTR ERV1 1 717 -17 659 251 53 5 chr2 7048429 7048636 -243639218 - L1ME3A LINE L1 -2254 3892 3676 691 213 38 6 chr2 7048637 7048797 -243639057 - LTR52 LTR ERVL -2 419 255 918 251 109 34 chr2 7048925 7049491 -243638363 - L1ME3A LINE L1 -2468 3678 3070 453 220 159 28 chr2 7050387 7050569 -243637285 - L1M4 LINE L1 -1479 4667 4462 304 302 163 6 chr2 7050680 7050852 -243637002 - L3 LINE CR1 -97 1480 1282 203 217 65 0 chr2 7051515 7051561 -243636293 - MIR SINE MIR -88 174 126 228 319 34 25 chr2 7051806 7051925 -243635929 - MIR SINE MIR -34 228 109 2195 172 40 27 chr2 7051925 7052468 -243635386 + MLT2A2 LTR ERVL 1 554 0 4020 154 53 80 chr2 7052566 7053370 -243634484 - LTR1 LTR ERV1 0 785 3 2145 156 21 32 chr2 7053682 7054061 -243633793 - THE1C LTR MaLR 0 375 1 246 235 73 0 chr2 7055993 7056061 -243631793 + MIR SINE MIR 19 91 -117 2807 95 8 0 chr2 7056136 7056495 -243631359 - THE1B LTR MaLR -2 362 1 1614 114 5 0 chr2 7057444 7057663 -243630191 + AluSq SINE Alu 78 297 -16 734 260 29 19 chr2 7058996 7059204 -243628650 - MER63A DNA MER1_type 0 210 1 387 0 0 0 chr2 7059498 7059541 -243628313 + (CA)n Simple_repeat Simple_repeat 1 43 0 27 29 0 0 chr2 7061682 7061716 -243626138 + AT_rich Low_complexity Low_complexity 1 34 0 2901 198 101 26 chr2 7062174 7062915 -243624939 + MER63D DNA MER1_type 1 797 -264 564 229 0 0 chr2 7062913 7063018 -243624836 + MER63D DNA MER1_type 956 1060 -2 * 213 39 0 0 chr2 7063740 7063766 -243624088 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 182 36 0 36 chr2 7064359 7064387 -243623467 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 198 299 42 49 chr2 7064577 7064721 -243623133 + MIR SINE MIR 20 162 -100 237 257 138 18 chr2 7065963 7066072 -243621782 + L3 LINE CR1 1406 1527 -50 218 235 20 0 chr2 7069035 7069086 -243618768 + CT-rich Low_complexity Low_complexity 3 54 0 363 314 109 46 chr2 7069871 7070009 -243617845 + MIR SINE MIR 7 160 -102 2209 106 27 7 chr2 7070009 7070310 -243617544 + AluSg SINE Alu 1 307 -3 363 314 109 46 chr2 7070310 7070346 -243617508 + MIR SINE MIR 160 192 -70 193 279 63 13 chr2 7070574 7070653 -243617201 + L2 LINE L2 2772 2854 -460 221 351 98 44 chr2 7070722 7070947 -243616907 + L2 LINE L2 3004 3240 -32 2270 121 0 0 chr2 7071016 7071321 -243616533 - AluSg SINE Alu -5 305 1 848 145 0 0 chr2 7071832 7072009 -243615845 + AluSg/x SINE Alu 166 310 0 380 336 23 0 chr2 7072009 7072137 -243615717 - L2 LINE L2 -620 2694 2564 1013 159 25 0 chr2 7072162 7072319 -243615535 - AluSg/x SINE Alu -14 298 138 1793 283 114 34 chr2 7072322 7073236 -243614618 - L2 LINE L2 -773 2541 1555 525 121 0 0 chr2 7073798 7073881 -243613973 + (TTTC)n Simple_repeat Simple_repeat 1 83 0 843 114 13 7 chr2 7073898 7074047 -243613807 + (TTCTC)n Simple_repeat Simple_repeat 5 154 0 1357 160 94 22 chr2 7074049 7074324 -243613530 - AluJo SINE Alu -17 295 1 252 143 45 36 chr2 7074506 7074618 -243613236 + (TA)n Simple_repeat Simple_repeat 1 113 0 252 317 108 17 chr2 7074634 7074754 -243613100 - MIR SINE MIR -112 150 20 26 50 0 0 chr2 7074921 7074961 -243612893 + AT_rich Low_complexity Low_complexity 1 40 0 210 273 0 0 chr2 7075378 7075433 -243612421 + (TA)n Simple_repeat Simple_repeat 2 56 0 1944 131 0 4 chr2 7075592 7075867 -243611987 - AluSx SINE Alu -38 274 1 237 65 0 0 chr2 7076434 7076465 -243611389 + (TG)n Simple_repeat Simple_repeat 2 32 0 251 170 0 0 chr2 7076628 7076675 -243611179 + L1ME LINE L1 98 144 -5926 190 158 0 26 chr2 7077000 7077038 -243610816 + MIR SINE MIR 112 148 -60 279 292 94 74 chr2 7078025 7078227 -243609627 - MIR3 SINE MIR -2 206 1 304 277 56 97 chr2 7078622 7078706 -243609148 - MIR SINE MIR -13 249 163 1572 207 53 68 chr2 7078706 7079102 -243608752 - MLT1B LTR MaLR 0 390 1 304 277 56 97 chr2 7079102 7079212 -243608642 - MIR SINE MIR -99 163 63 287 336 88 13 chr2 7080020 7080246 -243607608 + MIR SINE MIR 10 252 -10 1693 178 0 0 chr2 7080288 7080564 -243607290 + AluJo SINE Alu 31 306 -6 252 289 218 13 chr2 7081170 7081326 -243606528 - MIR SINE MIR -72 190 3 354 306 108 35 chr2 7081334 7081566 -243606288 - MIR SINE MIR 0 262 14 2261 135 42 8 chr2 7081566 7081943 -243605911 - MLT1B LTR MaLR 0 390 1 2170 105 3 22 chr2 7083479 7083794 -243604060 + AluSx SINE Alu 1 309 -3 1125 282 61 16 chr2 7084869 7085434 -243602420 + MER20B DNA MER1_type 10 643 -140 815 174 0 36 chr2 7085452 7085590 -243602264 + FLAM_C SINE Alu 1 133 0 329 321 95 54 chr2 7086072 7086440 -243601414 - L1ME LINE L1 -460 5702 5320 232 281 61 79 chr2 7087735 7087849 -243600005 - L2 LINE L2 -31 3282 3171 409 299 44 0 chr2 7088194 7088331 -243599523 - MIR3 SINE MIR -50 158 16 204 40 0 0 chr2 7088441 7088466 -243599388 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 190 269 128 13 chr2 7088576 7088654 -243599200 + L2 LINE L2 3147 3233 -39 821 277 139 30 chr2 7088770 7089239 -243598615 - LTR33A LTR ERVL 0 523 4 243 330 161 0 chr2 7089991 7090209 -243597645 - MIR SINE MIR -1 261 9 2366 86 201 5 chr2 7090435 7090809 -243597045 - LTR7 LTR ERV1 -3 447 1 360 307 97 38 chr2 7090825 7091063 -243596791 - MIR SINE MIR -9 253 2 219 337 142 30 chr2 7092590 7092759 -243595095 - MIR3 SINE MIR -11 197 10 546 157 9 52 chr2 7093199 7093314 -243594540 - MER3 DNA MER1_type -1 208 99 249 108 0 0 chr2 7093314 7093351 -243594503 + (T)n Simple_repeat Simple_repeat 1 37 0 6465 108 15 14 chr2 7093354 7094818 -243593036 - L1PA15 LINE L1 0 6165 4678 616 184 37 0 chr2 7094818 7094927 -243592927 - MER3 DNA MER1_type -96 113 1 216 331 66 54 chr2 7095099 7095265 -243592589 + L2 LINE L2 3098 3265 -7 1660 166 21 21 chr2 7095527 7095810 -243592044 + MER49 LTR ERV1 3 285 -638 1455 219 20 34 chr2 7095840 7096192 -243591662 + MER4D LTR ERV1 549 895 -8 400 181 52 26 chr2 7096855 7096971 -243590883 - LTR48 LTR ERV1 -48 739 621 1482 131 146 33 chr2 7096998 7097332 -243590522 - LTR49 LTR ERV1 -251 344 1 26 30 0 0 chr2 7097343 7097376 -243590478 + AT_rich Low_complexity Low_complexity 1 33 0 417 20 0 0 chr2 7099351 7099401 -243588453 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 804 240 16 87 chr2 7099495 7099737 -243588117 + AluJo SINE Alu 47 271 -41 664 241 48 28 chr2 7099786 7100083 -243587771 - L1M4 LINE L1 -2797 3349 3042 2544 58 0 0 chr2 7100083 7100391 -243587463 - AluY SINE Alu -3 308 1 664 241 48 28 chr2 7100391 7100445 -243587409 - L1M4 LINE L1 -3104 3042 2991 226 307 107 60 chr2 7100552 7100702 -243587152 + MIR SINE MIR 28 184 -78 385 274 109 57 chr2 7100915 7101145 -243586709 - MIR SINE MIR -9 253 12 265 273 75 68 chr2 7101936 7102097 -243585757 + MIR3 SINE MIR 3 164 -44 2191 109 7 0 chr2 7102553 7102846 -243585008 + AluSx SINE Alu 5 299 -13 1831 189 46 38 chr2 7103419 7103790 -243584064 + MLT1A2 LTR MaLR 1 374 0 3451 118 70 62 chr2 7104226 7104541 -243583313 - LTR29 LTR ERV1 0 622 298 2038 110 69 7 chr2 7104541 7104832 -243583022 - AluSq SINE Alu 0 313 5 3451 118 70 62 chr2 7104832 7105133 -243582721 - LTR29 LTR ERV1 -324 298 1 1643 210 52 9 chr2 7105305 7105653 -243582201 + MLT1A1 LTR MaLR 1 363 -2 664 271 66 6 chr2 7106306 7106472 -243581382 - AluJb SINE Alu 0 312 137 252 337 12 0 chr2 7106780 7106866 -243580988 + MIR SINE MIR 30 116 -92 2386 133 10 41 chr2 7107181 7107594 -243580260 + MER57A LTR ERV1 4 403 0 1863 116 0 8 chr2 7109129 7109387 -243578467 + AluSc SINE Alu 44 299 -10 25 65 0 0 chr2 7109812 7109858 -243577996 + AT_rich Low_complexity Low_complexity 1 46 0 585 237 95 25 chr2 7110045 7110266 -243577588 - L1MC4a LINE L1 -5 7803 6111 649 87 22 0 chr2 7110319 7110411 -243577443 - AluSc SINE Alu -7 302 209 228 35 0 0 chr2 7110443 7110472 -243577382 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 305 123 70 0 chr2 7110472 7110529 -243577325 - AluJ/FRAM SINE Alu -16 286 226 2135 82 7 21 chr2 7110896 7111187 -243576667 - AluSg SINE Alu -23 287 1 21 0 0 0 chr2 7111193 7111214 -243576640 + AT_rich Low_complexity Low_complexity 1 21 0 626 294 70 22 chr2 7111701 7111929 -243575925 - MIR SINE MIR -21 241 3 38 0 0 0 chr2 7112047 7112085 -243575769 + AT_rich Low_complexity Low_complexity 1 38 0 5840 32 5 0 chr2 7112085 7112736 -243575118 - L1PA5 LINE L1 -11 6143 5490 189 338 50 12 chr2 7113002 7113082 -243574772 - L2 LINE L2 -222 3050 2968 843 152 0 8 chr2 7113139 7113271 -243574583 - AluJb SINE Alu -181 131 1 2509 117 29 49 chr2 7113389 7113774 -243574080 + MER51B LTR ERV1 1 377 0 1814 153 28 93 chr2 7113988 7114387 -243573467 - THE1C LTR MaLR -2 373 1 306 164 0 0 chr2 7115145 7115200 -243572654 + T-rich Low_complexity Low_complexity 1 55 0 265 316 175 0 chr2 7115960 7116074 -243571780 + MIR3 SINE MIR 56 189 -19 3275 196 64 3 chr2 7116137 7116825 -243571029 - MER44D DNA MER2_type 0 605 4 1646 179 47 6 chr2 7117783 7118147 -243569707 + MLT1B LTR MaLR 1 379 -11 681 184 40 40 chr2 7118365 7118539 -243569315 + MER5B DNA MER1_type 5 178 0 218 32 32 0 chr2 7120243 7120274 -243567580 + (TG)n Simple_repeat Simple_repeat 2 33 0 226 254 0 0 chr2 7120407 7120462 -243567392 + (TA)n Simple_repeat Simple_repeat 1 55 0 2187 102 30 0 chr2 7120614 7120909 -243566945 + AluSx SINE Alu 1 304 -8 242 341 0 24 chr2 7120938 7121064 -243566790 + MIR SINE MIR 2 122 -86 1592 186 0 28 chr2 7121637 7121927 -243565927 + AluJo SINE Alu 1 282 -30 1265 202 4 0 chr2 7122046 7122279 -243565575 + MER46A DNA MER2_type 3 236 0 371 302 119 13 chr2 7122508 7122667 -243565187 - MIR SINE MIR -77 185 10 396 287 16 23 chr2 7123906 7124035 -243563819 - MIR SINE MIR -107 155 28 234 320 24 40 chr2 7124647 7124772 -243563082 + MIR SINE MIR 22 144 -118 250 322 70 35 chr2 7125084 7125199 -243562655 + MIR SINE MIR 62 180 -82 1211 256 77 35 chr2 7126596 7127131 -243560723 - MER77 LTR ERV1 -4 601 45 380 392 14 5 chr2 7127134 7127351 -243560503 + L2 LINE L2 2579 2797 -517 31 0 0 0 chr2 7127413 7127444 -243560410 + AT_rich Low_complexity Low_complexity 1 31 0 282 317 67 8 chr2 7127668 7127788 -243560066 + MIR SINE MIR 2 128 -134 2416 82 0 22 chr2 7127850 7128166 -243559688 - AluSg SINE Alu -1 309 1 272 338 0 0 chr2 7128194 7128271 -243559583 - L2 LINE L2 -38 3275 3199 190 300 17 17 chr2 7129051 7129111 -243558743 + MIR SINE MIR 8 67 -195 1031 171 17 11 chr2 7129507 7129688 -243558166 + AluJo SINE Alu 99 280 -32 257 0 30 0 chr2 7129863 7129896 -243557958 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 295 65 0 0 chr2 7130317 7130363 -243557491 - MADE1 DNA Mariner -34 46 1 206 338 0 0 chr2 7131426 7131494 -243556360 - L2 LINE L2 -216 3056 2989 260 373 127 19 chr2 7132957 7133169 -243554685 - MIR SINE MIR -8 254 20 184 53 53 26 chr2 7133184 7133222 -243554632 + T-rich Low_complexity Low_complexity 2 40 0 1327 164 52 36 chr2 7133299 7133604 -243554250 + THE1C LTR MaLR 66 375 0 189 415 0 0 chr2 7133667 7133720 -243554134 - L2 LINE L2 -99 3173 3121 280 294 53 29 chr2 7133731 7133901 -243553953 - L2 LINE L2 -1 3312 3139 5089 166 26 8 chr2 7134872 7135037 -243552817 - L1MA10 LINE L1 -1 6333 6172 306 50 0 0 chr2 7135037 7135077 -243552777 + (TG)n Simple_repeat Simple_repeat 2 41 0 5089 166 26 8 chr2 7135077 7135909 -243551945 - L1MA10 LINE L1 -162 6172 5318 1675 182 34 16 chr2 7135966 7136351 -243551503 + L1 LINE L1 4867 5258 -888 204 41 61 61 chr2 7136643 7136692 -243551162 + A-rich Low_complexity Low_complexity 1 49 0 333 241 0 13 chr2 7137868 7137947 -243549907 - MLT1I LTR MaLR -234 175 98 356 280 63 118 chr2 7138816 7139380 -243548474 + L2 LINE L2 2587 3054 -218 316 295 139 16 chr2 7139514 7139636 -243548218 + L2 LINE L2 3136 3272 0 186 43 0 0 chr2 7140454 7140477 -243547377 + (T)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr2 7140834 7140857 -243546997 + AT_rich Low_complexity Low_complexity 1 23 0 1307 177 83 36 chr2 7141283 7141560 -243546294 - AluJo SINE Alu -19 293 4 1606 171 44 83 chr2 7141776 7141916 -243545938 - MER57A LTR ERV1 0 403 259 2336 117 0 0 chr2 7141916 7142224 -243545630 + AluSx SINE Alu 1 308 -4 264 30 0 0 chr2 7142224 7142257 -243545597 + (GA)n Simple_repeat Simple_repeat 2 34 0 1606 171 44 83 chr2 7142257 7142525 -243545329 - MER57A LTR ERV1 -142 261 10 396 321 50 36 chr2 7143589 7143953 -243543901 + L1ME LINE L1 4104 4472 -1674 22 0 0 0 chr2 7144385 7144407 -243543447 + AT_rich Low_complexity Low_complexity 1 22 0 571 216 78 6 chr2 7144440 7144607 -243543247 + MER3 DNA MER1_type 31 209 0 380 277 115 74 chr2 7144689 7144985 -243542869 + L1ME LINE L1 5492 5799 -322 279 185 21 69 chr2 7145128 7145317 -243542537 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 24 0 0 0 chr2 7145798 7145822 -243542032 + AT_rich Low_complexity Low_complexity 1 24 0 764 212 0 0 chr2 7145822 7145954 -243541900 - FLAM_C SINE Alu -1 132 1 305 312 89 51 chr2 7146510 7146667 -243541187 - MIR3 SINE MIR -11 197 35 286 341 24 0 chr2 7147327 7147450 -243540404 + MLT-int LTR MaLR 423 548 -1187 280 218 7 127 chr2 7148059 7148201 -243539653 + MLT1E-int LTR MaLR 1032 1156 -215 226 237 13 40 chr2 7148767 7148781 -243539073 + MLT1G1 LTR MaLR 522 535 -60 2470 107 27 36 chr2 7148781 7149193 -243538661 + L1PA13 LINE L1 5752 6159 -4 226 237 13 40 chr2 7149193 7149254 -243538600 + MLT1G1 LTR MaLR 535 595 0 502 284 75 8 chr2 7149259 7149498 -243538356 + HAL1 LINE L1 1505 1759 -748 772 171 20 0 chr2 7149498 7149650 -243538204 + LTR49 LTR ERV1 1 155 -440 246 283 30 20 chr2 7150572 7150671 -243537183 - L2 LINE L2 -243 3070 2971 260 331 279 3 chr2 7150862 7151149 -243536705 + L2 LINE L2 2371 2736 -578 377 321 165 52 chr2 7151266 7152012 -243535842 - L2 LINE L2 0 3313 2480 379 263 83 3 chr2 7152743 7153054 -243534800 - L1MEc LINE L1 -1599 4616 4244 354 328 29 8 chr2 7153312 7153556 -243534298 - L1MEc LINE L1 -3138 3077 2829 323 329 62 44 chr2 7153665 7153939 -243533915 - L1MEc LINE L1 -3528 2687 2409 1268 288 98 34 chr2 7153988 7154541 -243533313 + MLT1E LTR MaLR 6 593 0 310 280 28 42 chr2 7154541 7154684 -243533170 - L1MEc LINE L1 -4051 2345 2205 337 242 114 15 chr2 7155399 7155531 -243532323 - L1MC5 LINE L1 -35 7926 7782 463 240 7 13 chr2 7156106 7156260 -243531594 - L1MB8 LINE L1 -2 6176 6024 1009 314 92 42 chr2 7156379 7156711 -243531143 - L1M4 LINE L1 -1712 4434 4120 2141 123 48 28 chr2 7156711 7157068 -243530786 - THE1B LTR MaLR 0 364 1 11120 109 4 5 chr2 7157068 7158650 -243529204 - THE1B-int LTR MaLR 0 1580 1 2159 121 51 28 chr2 7158650 7159006 -243528848 - THE1B LTR MaLR 0 364 1 1009 314 92 42 chr2 7159006 7159390 -243528464 - L1M4 LINE L1 -2025 4121 3680 24 0 0 0 chr2 7159676 7159700 -243528154 + AT_rich Low_complexity Low_complexity 1 24 0 228 277 27 45 chr2 7160098 7160210 -243527644 - L1M4 LINE L1 -1907 4239 4130 189 279 82 33 chr2 7160234 7160295 -243527559 - L2 LINE L2 -49 3223 3160 266 320 103 16 chr2 7160346 7160540 -243527314 + L2 LINE L2 3102 3312 -1 405 337 10 10 chr2 7160544 7160743 -243527111 + MER58A DNA MER1_type 4 202 -22 540 85 11 79 chr2 7161823 7162000 -243525854 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 200 136 51 17 chr2 7162003 7162062 -243525792 + (CA)n Simple_repeat Simple_repeat 1 61 0 233 299 21 25 chr2 7162076 7162218 -243525636 + CT-rich Low_complexity Low_complexity 4 236 0 237 306 0 0 chr2 7163215 7163277 -243524577 + C-rich Low_complexity Low_complexity 1 62 0 191 320 100 0 chr2 7163317 7163417 -243524437 + L2 LINE L2 2995 3104 -168 192 250 0 0 chr2 7163471 7163507 -243524347 + L2 LINE L2 3182 3217 -96 270 261 56 72 chr2 7163707 7163887 -243523967 + L2 LINE L2 3117 3293 -20 180 0 0 0 chr2 7163929 7163949 -243523905 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 210 37 0 0 chr2 7164267 7164294 -243523560 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 764 174 114 0 chr2 7164669 7164836 -243523018 - MER5A DNA MER1_type -3 186 1 891 282 32 16 chr2 7165845 7166097 -243521757 + MIR SINE MIR 3 258 -4 299 276 35 43 chr2 7166265 7166381 -243521473 + MIR3 SINE MIR 13 127 -81 307 315 31 39 chr2 7166716 7166843 -243521011 + MIR SINE MIR 17 142 -66 23 33 0 0 chr2 7167969 7167999 -243519855 + AT_rich Low_complexity Low_complexity 1 30 0 2041 129 86 9 chr2 7168426 7168774 -243519080 + THE1C LTR MaLR 1 375 0 221 260 0 0 chr2 7168847 7168897 -243518957 + (TTCA)n Simple_repeat Simple_repeat 1 50 0 451 130 67 27 chr2 7170126 7170599 -243517255 + (TG)n Simple_repeat Simple_repeat 1 491 0 226 113 56 14 chr2 7170611 7170682 -243517172 + (TG)n Simple_repeat Simple_repeat 2 75 0 371 231 56 37 chr2 7170875 7170983 -243516871 - LTR41 LTR ERVL -6 767 658 282 139 0 0 chr2 7171632 7171675 -243516179 - LTR41 LTR ERVL -730 43 1 28 71 0 0 chr2 7171803 7171859 -243515995 + AT_rich Low_complexity Low_complexity 1 56 0 2160 146 47 16 chr2 7172054 7172418 -243515436 + THE1C LTR MaLR 1 375 0 2437 132 0 0 chr2 7172444 7172801 -243515053 + THE1C-int LTR MaLR 15 371 -1209 602 150 71 7 chr2 7172928 7173068 -243514786 + THE1C-int LTR MaLR 1432 1580 0 2015 145 67 20 chr2 7173068 7173426 -243514428 + THE1C LTR MaLR 1 375 0 750 313 55 19 chr2 7173440 7173747 -243514107 + L2 LINE L2 2996 3313 0 1415 226 92 15 chr2 7174235 7174572 -243513282 + MLT1A1 LTR MaLR 3 365 0 494 89 0 111 chr2 7175379 7175469 -243512385 + MADE1 DNA Mariner 1 80 0 387 0 0 0 chr2 7175920 7175963 -243511891 + (CA)n Simple_repeat Simple_repeat 2 44 0 1575 162 19 15 chr2 7177027 7177122 -243510732 + AluSx SINE Alu 40 133 -179 234 0 0 0 chr2 7177122 7177148 -243510706 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1575 162 19 15 chr2 7177148 7177317 -243510537 + AluSx SINE Alu 133 305 -7 894 213 55 8 chr2 7177343 7177578 -243510276 - Zaphod DNA AcHobo -78 3953 3708 2138 172 0 18 chr2 7178356 7178699 -243509155 - MER1B DNA MER1_type 0 337 1 343 232 54 98 chr2 7179008 7179142 -243508712 - L1MC4a LINE L1 -322 5848 5719 188 388 16 16 chr2 7179821 7179942 -243507912 - L2 LINE L2 -4 3309 3189 314 292 60 64 chr2 7180001 7180234 -243507620 - L1M4 LINE L1 -3771 2375 2144 1164 228 49 62 chr2 7180265 7180655 -243507199 - MLT2C1 LTR ERVL -2 395 11 767 287 50 41 chr2 7181224 7181642 -243506212 - HAL1b LINE L1 -704 644 223 2111 115 3 3 chr2 7181647 7181952 -243505902 - AluSq SINE Alu -8 305 1 335 303 42 50 chr2 7183212 7183473 -243504381 + MER112 DNA MER1_type 2 260 0 26 50 0 0 chr2 7183666 7183706 -243504148 + AT_rich Low_complexity Low_complexity 1 40 0 265 283 120 0 chr2 7183755 7183847 -243504007 - MIR SINE MIR -85 123 21 3189 104 26 0 chr2 7184083 7184504 -243503350 - MER57B LTR ERV1 -2 432 1 360 247 0 12 chr2 7185691 7185772 -243502082 + L2 LINE L2 3234 3313 0 2896 135 29 0 chr2 7185913 7186327 -243501527 + MSTA LTR MaLR 2 427 -1 1620 107 21 4 chr2 7186464 7186698 -243501156 - AluSq SINE Alu -10 303 66 43 35 0 0 chr2 7187085 7187142 -243500712 + AT_rich Low_complexity Low_complexity 1 57 0 478 282 139 49 chr2 7187214 7187854 -243500000 - L2 LINE L2 -16 3297 2593 324 70 0 0 chr2 7187872 7187915 -243499939 + (CA)n Simple_repeat Simple_repeat 2 44 0 1097 177 65 140 chr2 7189008 7189393 -243498461 - MLT1B LTR MaLR 0 390 35 2558 94 6 17 chr2 7189394 7189754 -243498100 + L1PB1 LINE L1 5796 6151 0 25 0 0 0 chr2 7190238 7190263 -243497591 + AT_rich Low_complexity Low_complexity 1 25 0 269 298 128 0 chr2 7190327 7190421 -243497433 - L2 LINE L2 -2 3270 3165 2043 141 3 10 chr2 7190583 7190895 -243496959 - AluJb SINE Alu -2 310 1 222 333 39 0 chr2 7191363 7191441 -243496413 + L2 LINE L2 2879 2959 -355 239 308 31 0 chr2 7191611 7191676 -243496178 + L2 LINE L2 3246 3312 -1 449 264 71 65 chr2 7191786 7192168 -243495686 + L1 LINE L1 2648 3031 -3115 335 259 75 91 chr2 7192197 7192746 -243495108 + L1 LINE L1 3256 3789 -2357 2130 128 0 0 chr2 7192746 7193042 -243494812 + AluSg SINE Alu 1 296 -14 335 259 75 91 chr2 7193042 7193231 -243494623 + L1 LINE L1 3789 3979 -2167 228 265 59 0 chr2 7194697 7194765 -243493089 + MIR SINE MIR 106 177 -85 213 318 15 0 chr2 7195065 7195131 -243492723 + L2 LINE L2 3201 3267 -5 1571 161 63 100 chr2 7196448 7196827 -243491027 + MLT1A1 LTR MaLR 1 365 0 309 308 83 6 chr2 7197673 7197842 -243490012 - MIR SINE MIR -11 251 70 960 246 107 49 chr2 7197989 7198420 -243489434 - MLT1C LTR MaLR -3 464 9 22 0 0 0 chr2 7198744 7198766 -243489088 + AT_rich Low_complexity Low_complexity 1 22 0 1093 258 77 67 chr2 7200490 7200926 -243486928 - L1ME2 LINE L1 -208 5956 5504 2039 143 0 10 chr2 7200926 7201233 -243486621 + AluSx SINE Alu 1 304 -8 1093 258 77 67 chr2 7201233 7201477 -243486377 - L1ME2 LINE L1 -660 5504 5264 947 345 112 31 chr2 7201480 7202568 -243485286 + L2 LINE L2 2100 3272 0 206 62 31 0 chr2 7202900 7202932 -243484922 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1836 190 11 17 chr2 7205297 7205655 -243482199 + MLT1A2 LTR MaLR 8 363 -11 216 304 88 35 chr2 7205725 7205896 -243481958 + MER5A DNA MER1_type 4 183 -6 530 283 98 50 chr2 7206037 7206334 -243481520 - MER110 LTR ERV1 -14 477 167 483 250 70 0 chr2 7206417 7206573 -243481281 - MER110A LTR ERV1 -298 170 4 1410 169 51 42 chr2 7207013 7207414 -243480440 - MSTB2 LTR MaLR -2 455 1 225 0 0 0 chr2 7208131 7208156 -243479698 + (T)n Simple_repeat Simple_repeat 1 25 0 281 297 110 35 chr2 7209229 7209278 -243478576 - MIR SINE MIR -59 203 159 1436 231 136 62 chr2 7209278 7209735 -243478119 + MLT2B1 LTR ERVL 1 497 -23 216 0 0 0 chr2 7209735 7209759 -243478095 + (TG)n Simple_repeat Simple_repeat 2 25 0 1436 231 136 62 chr2 7209759 7209785 -243478069 + MLT2B1 LTR ERVL 497 520 0 281 297 110 35 chr2 7209785 7209880 -243477974 - MIR SINE MIR -103 159 48 207 0 0 0 chr2 7210990 7211013 -243476841 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 207 100 0 0 chr2 7211631 7211661 -243476193 + (A)n Simple_repeat Simple_repeat 1 30 0 349 259 123 24 chr2 7211729 7211899 -243475955 + L1ME LINE L1 5416 5602 -562 2276 78 0 0 chr2 7211932 7212247 -243475607 - AluY SINE Alu 0 315 1 275 239 245 15 chr2 7212294 7212651 -243475203 - MLT1J2 LTR MaLR -4 442 1 3347 104 57 62 chr2 7212863 7213393 -243474461 - MER1A DNA MER1_type 0 527 1 1028 126 0 48 chr2 7213628 7213795 -243474059 - L1PA11 LINE L1 -1 6173 6015 3051 54 3 0 chr2 7213796 7214169 -243473685 + L1PA10 LINE L1 5484 5857 -311 717 251 39 11 chr2 7214320 7214499 -243473355 - MER5A DNA MER1_type -2 187 4 1041 229 4 25 chr2 7214547 7214792 -243473062 - MER63B DNA MER1_type -196 240 1 296 130 74 0 chr2 7215411 7215465 -243472389 + MIR SINE MIR 118 175 -87 355 263 95 37 chr2 7216484 7216674 -243471180 - MIR SINE MIR -42 220 20 792 249 9 33 chr2 7216978 7217191 -243470663 + L1ME1 LINE L1 5954 6161 -5 445 304 73 22 chr2 7217272 7217588 -243470266 - LTR33 LTR ERVL 0 521 190 275 309 120 6 chr2 7217797 7217972 -243469882 - LTR33 LTR ERVL -324 197 3 789 346 26 17 chr2 7218352 7218696 -243469158 + L2 LINE L2 2457 2803 -511 744 178 0 22 chr2 7218697 7218832 -243469022 - FLAM_A SINE Alu -5 137 6 615 236 27 0 chr2 7218893 7219071 -243468783 + L2 LINE L2 2828 3022 -291 348 24 0 0 chr2 7219298 7219339 -243468515 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 189 18 6 chr2 7221776 7221940 -243465914 - LTR64 LTR ERVK -392 166 1 427 312 83 46 chr2 7223038 7223493 -243464361 - L1M4 LINE L1 -2875 3271 2800 823 232 32 48 chr2 7223618 7223868 -243463986 - MLT1E1 LTR MaLR -2 652 407 929 231 46 42 chr2 7223922 7224182 -243463672 - MLT1E1 LTR MaLR -389 265 5 350 223 36 45 chr2 7225511 7225844 -243462010 + L1MDa LINE L1 1125 1484 -5108 491 270 83 78 chr2 7225852 7226200 -243461654 + L1MDa LINE L1 1521 1922 -4777 2634 36 7 0 chr2 7226200 7226501 -243461353 + AluY SINE Alu 1 303 -8 491 270 83 78 chr2 7226501 7226721 -243461133 + L1MDa LINE L1 1922 2139 -4560 1856 270 116 41 chr2 7226754 7227085 -243460769 + L1M4 LINE L1 3587 3892 -2254 954 92 13 7 chr2 7227085 7227238 -243460616 + (GAAA)n Simple_repeat Simple_repeat 4 157 0 1856 270 116 41 chr2 7227238 7228404 -243459450 + L1M4 LINE L1 3892 5195 -951 374 328 47 0 chr2 7229456 7229625 -243458229 + MIR SINE MIR 25 200 -62 765 226 140 82 chr2 7229923 7230360 -243457494 + LTR37B LTR ERV1 7 468 0 2629 52 0 0 chr2 7230536 7230841 -243457013 - AluY SINE Alu -6 305 1 413 291 127 0 chr2 7232341 7232506 -243455348 + MIR SINE MIR 67 252 -10 298 285 176 57 chr2 7234165 7234267 -243453587 - L2 LINE L2 -73 3240 3152 2160 110 0 10 chr2 7234267 7234566 -243453288 + AluSg SINE Alu 9 304 -6 298 285 176 57 chr2 7234566 7234832 -243453022 - L2 LINE L2 -161 3152 2828 1045 293 140 55 chr2 7234966 7235346 -243452508 - L2 LINE L2 -710 2604 2258 1203 149 23 28 chr2 7235346 7235560 -243452294 + L1MC1 LINE L1 6121 6333 0 1045 293 140 55 chr2 7235560 7235930 -243451924 - L2 LINE L2 -1056 2258 1790 309 289 114 0 chr2 7236102 7236216 -243451638 - L2 LINE L2 -723 2591 2465 223 291 0 0 chr2 7236217 7236272 -243451582 - L2 LINE L2 -1529 1785 1731 1415 153 0 0 chr2 7236277 7236499 -243451355 + AluJo SINE Alu 91 312 0 290 274 189 11 chr2 7236508 7236683 -243451171 - L2 LINE L2 -1638 1676 1471 234 219 0 0 chr2 7236729 7236793 -243451061 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 230 335 134 12 chr2 7237516 7237680 -243450174 + MIR SINE MIR 54 237 -25 1677 87 55 0 chr2 7237681 7237899 -243449955 - MER30 DNA MER1_type 0 230 1 420 274 126 49 chr2 7238334 7238659 -243449195 + LTR52 LTR ERVL 2 351 -70 180 0 0 0 chr2 7238771 7238791 -243449063 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 193 365 56 9 chr2 7239031 7239138 -243448716 + L2 LINE L2 3167 3278 -35 198 71 0 0 chr2 7239212 7239240 -243448614 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 7239294 7239323 -243448531 + (CA)n Simple_repeat Simple_repeat 2 30 0 326 286 0 0 chr2 7239489 7239566 -243448288 + MIR SINE MIR 71 147 -115 496 327 112 11 chr2 7239856 7240125 -243447729 + MLT2F LTR ERVL 269 564 -99 597 276 164 15 chr2 7240684 7241014 -243446840 + MLT2F LTR ERVL 24 402 -261 261 0 0 0 chr2 7242056 7242085 -243445769 + (TG)n Simple_repeat Simple_repeat 2 30 0 692 276 107 31 chr2 7242537 7242846 -243445008 + MLT1C LTR MaLR 3 344 -123 263 293 0 27 chr2 7242846 7242921 -243444933 - L2 LINE L2 -36 3277 3205 207 0 0 0 chr2 7243026 7243049 -243444805 + (TA)n Simple_repeat Simple_repeat 1 23 0 3773 49 0 7 chr2 7244071 7244522 -243443332 - LTR7 LTR ERV1 -2 448 1 2676 75 45 0 chr2 7244522 7244897 -243442957 - HERVH LTR ERV1 0 7713 7322 1337 142 18 9 chr2 7244895 7245113 -243442741 - HERVH LTR ERV1 -1894 5819 5600 * 4134 142 31 2 chr2 7245114 7245757 -243442097 - HERVH LTR ERV1 -2564 5149 4488 3136 125 37 6 chr2 7245759 7246246 -243441608 - HERVH LTR ERV1 -3720 3993 3492 977 120 7 0 chr2 7246236 7246386 -243441468 - HERVH LTR ERV1 -4423 3290 3140 * 16955 101 20 19 chr2 7246380 7248926 -243438928 - HERVH LTR ERV1 -4726 2987 437 991 85 42 78 chr2 7248927 7249182 -243438672 - HERVH LTR ERV1 -7093 620 437 4478 89 5 6 chr2 7249183 7249804 -243438050 - HERVH LTR ERV1 -7093 620 1 3663 55 4 11 chr2 7249806 7250257 -243437597 - LTR7 LTR ERV1 -2 448 1 493 296 90 48 chr2 7250400 7250824 -243437030 + LTR16A LTR ERVL 1 442 -8 267 307 59 52 chr2 7251022 7251175 -243436679 + L2 LINE L2 3160 3313 0 231 253 69 35 chr2 7251955 7252042 -243435812 + MER5A DNA MER1_type 97 186 -3 266 248 90 60 chr2 7253776 7253909 -243433945 + L2 LINE L2 3136 3272 0 213 330 98 0 chr2 7254350 7254462 -243433392 + L3b LINE CR1 1121 1243 -340 506 280 78 56 chr2 7254467 7254570 -243433284 - MIR SINE MIR 0 262 163 1704 197 7 102 chr2 7254570 7255001 -243432853 + MLT1B LTR MaLR 1 390 0 506 280 78 56 chr2 7255001 7255129 -243432725 - MIR SINE MIR -99 163 26 2084 143 74 34 chr2 7255184 7255534 -243432320 + THE1B LTR MaLR 1 364 0 294 235 78 86 chr2 7256132 7256375 -243431479 - L1MC4 LINE L1 -878 7164 6924 468 293 8 0 chr2 7256407 7256540 -243431314 - MER58A DNA MER1_type -44 180 47 423 0 0 0 chr2 7257125 7257172 -243430682 + (TG)n Simple_repeat Simple_repeat 2 48 0 371 356 58 5 chr2 7257246 7257437 -243430417 + MIR SINE MIR 21 221 -41 194 289 44 104 chr2 7257561 7257696 -243430158 - MIR SINE MIR -113 149 23 226 261 171 0 chr2 7258277 7258365 -243429489 + L2 LINE L2 3169 3271 -1 488 43 159 0 chr2 7259779 7259848 -243428006 - MADE1 DNA Mariner 0 80 1 536 220 184 54 chr2 7260043 7260355 -243427499 - MLT1J2 LTR MaLR -10 440 44 377 290 48 0 chr2 7261531 7261655 -243426199 + MER94 DNA DNA 5 134 0 22 0 0 0 chr2 7262055 7262077 -243425777 + AT_rich Low_complexity Low_complexity 1 22 0 233 268 87 22 chr2 7262105 7262288 -243425566 - L1M4 LINE L1 -1006 5140 4946 337 315 124 19 chr2 7262368 7262635 -243425219 - L1M4 LINE L1 -1323 4823 4529 1223 277 36 6 chr2 7262637 7262969 -243424885 + L1M4 LINE L1 1 342 -6200 298 175 186 21 chr2 7262961 7263058 -243424796 + L1M4 LINE L1 1745 1857 -4789 * 483 298 71 60 chr2 7263412 7263975 -243423879 - L1M4 LINE L1 -1922 4224 3656 281 214 0 11 chr2 7264150 7264239 -243423615 + (TA)n Simple_repeat Simple_repeat 1 88 0 389 304 56 60 chr2 7264638 7264673 -243423181 - L1MEd LINE L1 -4949 1170 1136 1955 153 0 10 chr2 7264673 7264980 -243422874 - AluSx SINE Alu -8 304 1 389 304 56 60 chr2 7264980 7265210 -243422644 - L1MEd LINE L1 -4983 1136 906 204 273 0 0 chr2 7265251 7265295 -243422559 + (TA)n Simple_repeat Simple_repeat 2 45 0 3560 139 59 13 chr2 7265295 7265571 -243422283 + MER39B LTR ERV1 3 265 -388 2067 134 80 14 chr2 7265571 7265922 -243421932 + THE1C LTR MaLR 1 374 -1 3560 139 59 13 chr2 7265922 7266240 -243421614 + MER39B LTR ERV1 265 624 -29 2178 73 6 94 chr2 7268153 7268481 -243419373 + AluSx SINE Alu 1 299 -13 187 367 46 0 chr2 7268578 7268687 -243419167 - MIR SINE MIR -32 230 117 468 212 22 4 chr2 7269248 7269484 -243418370 + GA-rich Low_complexity Low_complexity 1 240 0 1851 161 33 3 chr2 7270088 7270213 -243417641 + AluSx SINE Alu 2 122 -190 212 0 36 0 chr2 7270213 7270241 -243417613 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1851 161 33 3 chr2 7270241 7270414 -243417440 + AluSx SINE Alu 122 309 -3 220 213 43 0 chr2 7271350 7271397 -243416457 - MIR SINE MIR -132 130 82 191 283 22 0 chr2 7271882 7271928 -243415926 - MIR3 SINE MIR -16 192 146 1605 248 102 40 chr2 7272340 7273526 -243414328 + L1ME3A LINE L1 4884 6166 -4 204 40 0 0 chr2 7276179 7276204 -243411650 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 250 245 60 73 chr2 7277167 7277332 -243410522 - MIR3 SINE MIR -11 197 36 288 0 0 0 chr2 7277848 7277880 -243409974 + (T)n Simple_repeat Simple_repeat 1 32 0 470 364 65 14 chr2 7277973 7278190 -243409664 - MIR SINE MIR -15 247 20 352 376 129 0 chr2 7279027 7279237 -243408617 + L2 LINE L2 2488 2724 -590 876 305 57 55 chr2 7279406 7280059 -243407795 + L1MC4a LINE L1 5254 5907 -1901 292 149 15 15 chr2 7280067 7280134 -243407720 + (TA)n Simple_repeat Simple_repeat 2 68 0 306 132 0 0 chr2 7280286 7280339 -243407515 + (TG)n Simple_repeat Simple_repeat 2 54 0 264 326 76 5 chr2 7280350 7280534 -243407320 - L2 LINE L2 -1506 1808 1612 2290 116 129 13 chr2 7280816 7281195 -243406659 - MSTA LTR MaLR -5 423 1 260 239 0 0 chr2 7281283 7281350 -243406504 - HERV16 LTR ERVL -83 4913 4847 360 192 27 0 chr2 7281769 7281842 -243406012 - LTR16B LTR ERVL -389 75 1 4840 221 32 7 chr2 7281985 7282999 -243404855 + MER45B DNA AcHobo 1 1040 0 1967 194 22 8 chr2 7283548 7283908 -243403946 - MLT1A1 LTR MaLR 0 365 1 2317 73 0 0 chr2 7284425 7284765 -243403089 + AluY SINE Alu 1 311 0 2214 139 0 0 chr2 7286277 7286587 -243401267 - AluSx SINE Alu -2 310 1 197 206 48 48 chr2 7286978 7287041 -243400813 + L2 LINE L2 3158 3220 -93 277 301 48 19 chr2 7287141 7287244 -243400610 + L2 LINE L2 3155 3260 -12 609 330 33 0 chr2 7288217 7288432 -243399422 + MIR SINE MIR 20 241 -21 181 337 42 60 chr2 7288511 7288677 -243399177 + MIR3 SINE MIR 37 199 -9 215 59 0 29 chr2 7288994 7289028 -243398826 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 1912 208 45 75 chr2 7289088 7289645 -243398209 - MLT1F LTR MaLR -2 540 1 290 269 41 69 chr2 7289723 7289868 -243397986 - L2 LINE L2 -853 2461 2321 1379 316 80 47 chr2 7290126 7290610 -243397244 + L2 LINE L2 2209 2676 -637 2216 90 37 7 chr2 7290610 7290910 -243396944 - AluSg SINE Alu -1 309 1 1379 316 80 47 chr2 7290910 7291488 -243396366 + L2 LINE L2 2676 3313 0 245 252 25 109 chr2 7291825 7291944 -243395910 + L2 LINE L2 3190 3298 -15 319 295 38 0 chr2 7292104 7292209 -243395645 + L1P LINE L1 3656 3764 -2382 203 243 0 0 chr2 7292210 7292247 -243395607 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 236 34 22 chr2 7292254 7292343 -243395511 + L1MC4 LINE L1 6616 6705 -1337 * 237 165 94 47 chr2 7292322 7292407 -243395447 - L1MC4 LINE L1 -1340 6702 6614 380 184 23 0 chr2 7292411 7292498 -243395356 + (CATATA)n Simple_repeat Simple_repeat 6 94 0 761 244 27 44 chr2 7292584 7292872 -243394982 + L1M4 LINE L1 4079 4360 -1786 2878 215 108 82 chr2 7293112 7293623 -243394231 + L1MC3 LINE L1 6593 7089 -696 381 243 0 0 chr2 7293623 7293697 -243394157 + MLT1F1 LTR MaLR 50 123 -444 2878 215 108 82 chr2 7293697 7294260 -243393594 + L1MC3 LINE L1 7089 7770 -15 2035 198 8 6 chr2 7294305 7294669 -243393185 - MLT1A1 LTR MaLR 0 365 1 431 322 63 51 chr2 7294682 7295317 -243392537 + L1MB3 LINE L1 3512 4154 -1992 685 207 95 12 chr2 7295345 7295514 -243392340 + MER5A DNA MER1_type 1 183 -6 361 252 92 30 chr2 7295520 7295651 -243392203 + LTR16A1 LTR ERVL 1 139 -318 843 184 13 0 chr2 7295689 7295841 -243392013 + MER2 DNA MER2_type 17 170 -175 * 965 211 48 55 chr2 7295839 7296128 -243391726 + LTR16A1 LTR ERVL 171 457 0 500 295 49 11 chr2 7296218 7296401 -243391453 - MIR SINE MIR -1 261 72 23 68 0 0 chr2 7296477 7296521 -243391333 + AT_rich Low_complexity Low_complexity 1 44 0 344 279 38 100 chr2 7296894 7297234 -243390620 + MLT1I LTR MaLR 91 409 0 996 234 114 32 chr2 7297361 7297677 -243390177 + MER2 DNA MER2_type 2 343 -2 335 291 57 60 chr2 7297690 7297890 -243389964 + L1MB3 LINE L1 5039 5239 -907 216 111 0 0 chr2 7297890 7297926 -243389928 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 291 57 60 chr2 7297926 7298058 -243389796 + L1MB3 LINE L1 5239 5370 -776 557 282 87 17 chr2 7298228 7298523 -243389331 + L1ME4a LINE L1 5613 5883 -238 428 295 77 22 chr2 7299507 7299690 -243388164 - MIR SINE MIR -58 204 12 186 43 0 0 chr2 7299915 7299938 -243387916 + (TG)n Simple_repeat Simple_repeat 1 23 0 1982 104 33 0 chr2 7300201 7300496 -243387358 + AluSg SINE Alu 1 304 0 239 256 35 47 chr2 7302987 7303073 -243384781 + MIR SINE MIR 137 221 -41 2629 132 5 3 chr2 7303170 7303542 -243384312 + THE1C LTR MaLR 1 373 -2 3500 171 53 0 chr2 7303645 7304271 -243383583 + L1MB3 LINE L1 5523 6181 -2 294 293 0 12 chr2 7305122 7305204 -243382650 + MIR SINE MIR 2 82 -180 2868 152 26 4 chr2 7306387 7306842 -243381012 - L1PA15 LINE L1 0 6165 5701 23 0 0 0 chr2 7308508 7308531 -243379323 + AT_rich Low_complexity Low_complexity 1 23 0 1230 89 157 0 chr2 7309162 7309313 -243378541 + MLT2A1 LTR ERVL 224 412 -32 806 30 10 0 chr2 7309313 7309414 -243378440 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1230 89 157 0 chr2 7309414 7309453 -243378401 + MLT2A1 LTR ERVL 412 444 0 279 0 0 0 chr2 7309925 7309956 -243377898 + (CAT)n Simple_repeat Simple_repeat 3 33 0 813 290 97 37 chr2 7309989 7310444 -243377410 - MLT1L LTR MaLR -46 569 88 475 204 350 19 chr2 7310888 7311001 -243376853 - MER63A DNA MER1_type -1479 209 135 396 0 0 0 chr2 7311001 7311045 -243376809 + (CA)n Simple_repeat Simple_repeat 2 45 0 475 204 350 19 chr2 7311045 7311088 -243376766 - MER63A DNA MER1_type -1553 135 1 217 368 135 11 chr2 7311281 7311466 -243376388 - L2 LINE L2 -235 3037 2830 1583 212 41 13 chr2 7311622 7312155 -243375699 + MER92B LTR ERV1 15 636 0 368 123 0 15 chr2 7312948 7313013 -243374841 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 412 142 115 108 chr2 7313344 7313492 -243374362 + MER53 DNA DNA 1 149 -40 267 31 0 0 chr2 7313848 7313880 -243373974 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 180 152 0 0 chr2 7316074 7316107 -243371747 + GA-rich Low_complexity Low_complexity 1 33 0 513 323 90 32 chr2 7317082 7317426 -243370428 - L2 LINE L2 -44 3269 2906 257 314 48 40 chr2 7320290 7320414 -243367440 + MIR SINE MIR 20 144 -118 250 339 46 26 chr2 7320970 7321165 -243366689 - L2 LINE L2 -653 2661 2463 901 231 74 0 chr2 7322972 7323214 -243364640 + MIR SINE MIR 1 260 -2 215 266 38 13 chr2 7325819 7325898 -243361956 + MIR SINE MIR 111 191 -71 537 164 116 156 chr2 7327390 7327564 -243360290 + MER20 DNA MER1_type 1 166 -53 285 98 0 0 chr2 7327564 7327605 -243360249 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 164 116 156 chr2 7327605 7327655 -243360199 + MER20 DNA MER1_type 166 216 -3 282 358 5 27 chr2 7327668 7327855 -243359999 + MIR SINE MIR 46 228 -34 203 241 37 0 chr2 7327852 7327906 -243359948 + L2 LINE L2 3211 3266 -6 * 449 205 49 25 chr2 7328685 7328807 -243359047 + L1ME4a LINE L1 5997 6121 0 284 289 31 21 chr2 7329254 7329351 -243358503 + MIR SINE MIR 44 141 -67 2208 114 0 22 chr2 7331862 7332179 -243355675 + AluSg SINE Alu 1 310 0 199 380 53 9 chr2 7333075 7333188 -243354666 + MIR SINE MIR 36 153 -109 21 0 0 0 chr2 7334315 7334336 -243353518 + AT_rich Low_complexity Low_complexity 1 21 0 2201 135 112 0 chr2 7334934 7335319 -243352535 - MSTA LTR MaLR 0 428 1 213 302 0 0 chr2 7335439 7335492 -243352362 - MIR SINE MIR -163 99 47 218 220 9 147 chr2 7336824 7336884 -243350970 + MER5A DNA MER1_type 16 56 -133 2134 133 0 0 chr2 7336884 7337192 -243350662 + AluSx SINE Alu 3 310 -2 218 220 9 147 chr2 7337192 7337240 -243350614 + MER5A DNA MER1_type 56 109 -80 619 185 106 7 chr2 7337247 7337398 -243350456 - MER5B DNA MER1_type -12 166 1 327 265 68 0 chr2 7337552 7337684 -243350170 + MIR SINE MIR 60 200 -62 1594 158 105 31 chr2 7339044 7339367 -243348487 + MER7A DNA MER2_type 2 346 0 501 271 52 35 chr2 7339828 7340057 -243347797 - LTR67 LTR ERVL 0 557 325 280 379 26 13 chr2 7340653 7340806 -243347048 - MIR3 SINE MIR -38 170 16 748 212 67 56 chr2 7342722 7343049 -243344805 - LTR37B LTR ERV1 -7 461 91 22 0 0 0 chr2 7343639 7343661 -243344193 + AT_rich Low_complexity Low_complexity 1 22 0 1893 110 77 44 chr2 7343711 7344074 -243343780 + THE1C LTR MaLR 1 375 0 261 83 0 0 chr2 7345806 7345842 -243342012 + (CA)n Simple_repeat Simple_repeat 1 36 0 198 340 21 11 chr2 7346811 7346905 -243340949 + MIR SINE MIR 60 154 -108 1104 238 79 0 chr2 7348575 7348840 -243339014 - MER58B DNA MER1_type 0 341 56 232 213 13 27 chr2 7349003 7349078 -243338776 + (TGAA)n Simple_repeat Simple_repeat 1 74 0 208 341 145 15 chr2 7350578 7350776 -243337078 + MIR3 SINE MIR 21 241 -21 1201 118 82 282 chr2 7350776 7351311 -243336543 - MSTA LTR MaLR 0 428 1 4172 146 50 21 chr2 7351499 7352262 -243335592 + LTR1 LTR ERV1 1 785 0 247 361 62 0 chr2 7352964 7353094 -243334760 - MIR SINE MIR -105 157 20 3528 176 30 11 chr2 7353095 7353849 -243334005 + L1MA9 LINE L1 4242 5010 -1136 5163 190 18 9 chr2 7354089 7354863 -243332991 + L1MA9 LINE L1 5002 5768 -544 222 37 0 0 chr2 7354863 7354890 -243332964 + (CA)n Simple_repeat Simple_repeat 2 28 0 5163 190 18 9 chr2 7354890 7355153 -243332701 + L1MA9 LINE L1 5768 6027 -285 1480 196 28 39 chr2 7355153 7355489 -243332365 + AluJo SINE Alu 1 333 0 5163 190 18 9 chr2 7355489 7355749 -243332105 + L1MA9 LINE L1 6027 6311 -1 204 325 165 21 chr2 7356345 7356733 -243331121 + L2 LINE L2 2454 2897 -417 254 265 29 0 chr2 7356733 7356801 -243331053 + CT-rich Low_complexity Low_complexity 2 71 0 190 357 56 32 chr2 7356832 7357081 -243330773 + L2 LINE L2 2945 3199 -73 315 294 43 37 chr2 7357271 7357434 -243330420 + MIR SINE MIR 35 198 -64 1673 190 73 38 chr2 7357784 7358163 -243329691 - MLT1C LTR MaLR 0 467 72 1320 219 76 28 chr2 7358163 7358520 -243329334 + MLT1A2 LTR MaLR 1 374 0 1673 190 73 38 chr2 7358520 7358535 -243329319 - MLT1C LTR MaLR -395 72 59 3575 70 4 7 chr2 7358542 7358996 -243328858 + MLT2A2 LTR ERVL 1 453 0 192 296 0 0 chr2 7360061 7360115 -243327739 - L2 LINE L2 0 3272 3219 365 265 11 99 chr2 7360182 7360363 -243327491 + MIR SINE MIR 62 226 -36 290 68 0 23 chr2 7360466 7360510 -243327344 - MADE1 DNA Mariner -37 43 1 198 0 0 0 chr2 7361014 7361036 -243326818 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 232 326 32 0 chr2 7361772 7361867 -243325987 + MIR SINE MIR 43 140 -68 221 281 37 49 chr2 7363984 7364066 -243323788 - L2 LINE L2 0 3272 3192 505 299 23 37 chr2 7364733 7364976 -243322878 + MIR SINE MIR 18 253 -9 1214 254 100 33 chr2 7365231 7365697 -243322157 - MER21B LTR ERV1 -97 834 294 374 212 0 0 chr2 7365770 7365836 -243322018 - MER21B LTR ERV1 -785 78 13 277 284 110 19 chr2 7368119 7368274 -243319580 - MLT1L LTR MaLR -10 605 437 457 286 58 15 chr2 7368649 7368862 -243318992 - MIR SINE MIR -22 240 18 219 333 108 8 chr2 7369052 7369172 -243318682 - MIR3 SINE MIR -21 187 56 2506 57 3 0 chr2 7369229 7369527 -243318327 + AluY SINE Alu 1 299 -12 235 301 115 9 chr2 7369802 7369915 -243317939 + MIR SINE MIR 88 212 -50 270 316 54 65 chr2 7370623 7370791 -243317063 + MIR3 SINE MIR 16 181 -27 1169 42 0 0 chr2 7370792 7370934 -243316920 + L1PA5 LINE L1 6013 6154 0 318 282 0 0 chr2 7371553 7371695 -243316159 + (CA)n Simple_repeat Simple_repeat 2 143 0 413 282 30 39 chr2 7372557 7372716 -243315138 - MIR SINE MIR -63 145 23 1426 212 43 54 chr2 7373051 7373219 -243314635 + MLT1A2 LTR MaLR 1 169 -205 2037 125 7 0 chr2 7373219 7373523 -243314331 + AluSq SINE Alu 1 306 -7 1426 212 43 54 chr2 7373523 7373726 -243314128 + MLT1A2 LTR MaLR 169 368 -6 275 247 26 39 chr2 7373860 7373937 -243313917 - MER58B DNA MER1_type 0 341 266 255 314 120 31 chr2 7374573 7374764 -243313090 - MIR SINE MIR -6 256 49 213 132 0 0 chr2 7375338 7375376 -243312478 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 300 273 7 chr2 7376257 7376407 -243311447 - MIR SINE MIR -41 221 32 1309 166 12 104 chr2 7376513 7376695 -243311159 - AluJo SINE Alu -2 310 113 243 0 0 0 chr2 7376695 7376722 -243311132 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2692 16 0 0 chr2 7376724 7377030 -243310824 - AluYb8 SINE Alu -12 306 1 1309 166 12 104 chr2 7377030 7377181 -243310673 - AluJo SINE Alu -200 112 5 37 62 0 0 chr2 7377530 7377595 -243310259 + AT_rich Low_complexity Low_complexity 1 65 0 320 230 0 10 chr2 7377896 7377996 -243309858 + CT-rich Low_complexity Low_complexity 2 100 0 1495 217 40 40 chr2 7378249 7378623 -243309231 + MLT1A2 LTR MaLR 1 374 0 696 342 44 44 chr2 7378689 7379125 -243308729 + L2 LINE L2 2836 3271 -1 759 244 72 29 chr2 7379156 7379687 -243308167 - MLT1E1 LTR MaLR -2 652 1 334 353 30 18 chr2 7379772 7379939 -243307915 + MIR SINE MIR 65 233 -29 183 42 0 0 chr2 7380138 7380162 -243307692 + (A)n Simple_repeat Simple_repeat 1 24 0 1052 248 9 0 chr2 7381536 7381758 -243306096 - MLT1A1 LTR MaLR 0 365 142 1230 203 130 20 chr2 7382561 7382906 -243304948 - MLT1B LTR MaLR -4 386 4 333 321 125 22 chr2 7383523 7383747 -243304107 + LTR16A LTR ERVL 115 361 -89 952 330 54 39 chr2 7384635 7385207 -243302647 + HERV16 LTR ERVL 991 1571 -3425 1028 291 44 47 chr2 7385396 7386245 -243301609 + L1M4 LINE L1 2131 2976 -3170 1171 89 0 56 chr2 7386280 7386438 -243301416 - L1PB1 LINE L1 -207 5944 5796 207 0 0 0 chr2 7386438 7386461 -243301393 + (CA)n Simple_repeat Simple_repeat 2 24 0 1171 89 0 56 chr2 7386461 7386481 -243301373 - L1PB1 LINE L1 -355 5796 5776 393 107 47 33 chr2 7386494 7386644 -243301210 + (TA)n Simple_repeat Simple_repeat 1 152 0 253 57 23 68 chr2 7386679 7386767 -243301087 + (TA)n Simple_repeat Simple_repeat 2 85 0 2047 88 35 0 chr2 7386771 7387056 -243300798 - L1PB1 LINE L1 -360 5791 5497 380 349 50 43 chr2 7387129 7387387 -243300467 + L2 LINE L2 3005 3264 -8 412 274 11 86 chr2 7388009 7388184 -243299670 - MIR3 SINE MIR -27 181 20 204 40 0 0 chr2 7388762 7388787 -243299067 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 278 358 50 11 chr2 7389853 7390032 -243297822 + MIR3 SINE MIR 14 199 -9 510 203 0 0 chr2 7390917 7391035 -243296819 + (TG)n Simple_repeat Simple_repeat 1 118 0 548 302 131 34 chr2 7392186 7392454 -243295400 - MER115 DNA AcHobo -398 295 2 228 182 0 0 chr2 7393844 7393888 -243293966 + MIR SINE MIR 84 127 -135 2266 114 76 15 chr2 7394330 7394673 -243293181 + THE1B LTR MaLR 1 364 0 258 95 0 0 chr2 7395094 7395136 -243292718 + (TG)n Simple_repeat Simple_repeat 2 43 0 235 316 68 34 chr2 7396203 7396380 -243291474 - MIR SINE MIR -77 185 3 466 257 56 78 chr2 7398643 7399111 -243288743 + MLT1F1 LTR MaLR 17 537 -5 231 317 39 65 chr2 7401125 7401299 -243286555 + MIR SINE MIR 5 171 -62 184 293 35 0 chr2 7401961 7402019 -243285835 - L2 LINE L2 -18 3254 3195 672 295 78 4 chr2 7402781 7403025 -243284829 - MLT1C LTR MaLR -2 465 204 1398 141 90 31 chr2 7403513 7403618 -243284236 + AluSp SINE Alu 10 107 -206 2145 88 3 26 chr2 7403618 7403923 -243283931 + AluY SINE Alu 1 298 -13 1398 141 90 31 chr2 7403923 7404073 -243283781 + AluSp SINE Alu 107 280 -33 22 0 0 0 chr2 7404093 7404115 -243283739 + AT_rich Low_complexity Low_complexity 1 22 0 410 318 218 45 chr2 7404425 7404938 -243282916 + L1MC4a LINE L1 5255 5856 -1952 557 365 44 6 chr2 7404963 7405284 -243282570 - MLT1J1 LTR MaLR -43 403 71 396 141 125 0 chr2 7405861 7405925 -243281929 - FRAM/FAM SINE Alu -95 71 1 509 225 73 22 chr2 7406389 7406533 -243281321 - MLT1J2 LTR MaLR -289 161 18 200 173 39 58 chr2 7406656 7406708 -243281146 + GA-rich Low_complexity Low_complexity 4 54 0 248 130 22 0 chr2 7407037 7407083 -243280771 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2411 120 40 0 chr2 7408305 7408654 -243279200 - THE1B LTR MaLR -1 363 1 251 298 28 61 chr2 7408868 7409044 -243278810 + MIR SINE MIR 34 206 -2 33 56 0 0 chr2 7409053 7409107 -243278747 + AT_rich Low_complexity Low_complexity 1 54 0 248 270 50 20 chr2 7409229 7409329 -243278525 + MIR SINE MIR 18 120 -142 226 260 30 80 chr2 7409333 7409433 -243278421 + MIR SINE MIR 89 183 -79 239 294 198 23 chr2 7411809 7411986 -243275868 - L2 LINE L2 -4 3309 3102 3698 30 0 0 chr2 7412158 7412588 -243275266 - L1PA2 LINE L1 0 6155 5726 4184 11 0 0 chr2 7412588 7413089 -243274765 + L1PA2 LINE L1 5221 5721 -434 350 161 23 35 chr2 7413318 7413405 -243274449 + L1MEc LINE L1 2232 2317 -4079 360 282 15 8 chr2 7413476 7413607 -243274247 + L1MCc LINE L1 27 158 -6265 308 294 147 49 chr2 7413708 7413973 -243273881 + L1MCc LINE L1 298 588 -5835 403 195 25 93 chr2 7414099 7414217 -243273637 + L1MCc LINE L1 818 927 -5496 1477 231 46 3 chr2 7414917 7415246 -243272608 + MLT1A1 LTR MaLR 1 343 -22 250 184 41 0 chr2 7415246 7415295 -243272559 + MLT1A1 LTR MaLR 315 365 0 190 292 22 56 chr2 7415844 7415933 -243271921 + MIR3 SINE MIR 89 174 -34 1095 332 125 29 chr2 7415936 7417253 -243270601 + L2 LINE L2 1830 3272 0 335 326 88 21 chr2 7417294 7417487 -243270367 + MIR3 SINE MIR 2 207 -1 1047 166 42 0 chr2 7417919 7418112 -243269742 + MER3 DNA MER1_type 9 209 0 2202 160 35 38 chr2 7418711 7419257 -243268597 + MLT2A2 LTR ERVL 1 551 -3 414 0 0 0 chr2 7419257 7419303 -243268551 + (CA)n Simple_repeat Simple_repeat 2 47 0 249 159 0 0 chr2 7421475 7421519 -243266335 + (TA)n Simple_repeat Simple_repeat 1 44 0 204 135 0 0 chr2 7421518 7421555 -243266299 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 531 252 38 26 chr2 7421560 7421787 -243266067 - L1MD3 LINE L1 -1359 6683 6443 1121 123 0 0 chr2 7421868 7422030 -243265824 + MLT2B2 LTR ERVL 2 163 -352 2088 140 143 11 chr2 7422176 7422554 -243265300 + MSTA LTR MaLR 1 428 0 27 81 0 0 chr2 7422805 7422867 -243264987 + AT_rich Low_complexity Low_complexity 1 62 0 2936 194 22 2 chr2 7423339 7423849 -243264005 - MLT2B1 LTR ERVL 0 520 1 1574 243 102 49 chr2 7423945 7424533 -243263321 + L1MC4 LINE L1 6468 7086 -956 1106 280 98 22 chr2 7424664 7425071 -243262783 + L1MC4 LINE L1 7464 7901 -141 230 216 0 0 chr2 7425075 7425126 -243262728 + L1MC4 LINE L1 7990 8040 -2 2236 105 6 10 chr2 7427004 7427317 -243260537 + AluSx SINE Alu 1 312 0 4195 195 20 5 chr2 7427456 7429009 -243258845 - L1MA9 LINE L1 -14 6298 4536 287 220 0 0 chr2 7429021 7429080 -243258774 - L1MA9 LINE L1 -2494 3652 3594 1364 248 28 55 chr2 7429246 7429645 -243258209 - MLT1E LTR MaLR 0 593 206 216 111 0 0 chr2 7429674 7429710 -243258144 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 213 0 0 chr2 7429710 7429757 -243258097 - MLT1E LTR MaLR -491 163 117 340 239 0 54 chr2 7430343 7430435 -243257419 + L2 LINE L2 3186 3272 0 235 291 0 0 chr2 7431101 7431156 -243256698 + CT-rich Low_complexity Low_complexity 2 56 0 382 296 113 31 chr2 7431222 7431381 -243256473 + MIR3 SINE MIR 5 176 -32 361 299 54 65 chr2 7432137 7432321 -243255533 - MIR SINE MIR -56 206 25 1569 233 55 17 chr2 7432767 7433187 -243254667 + MER63B DNA MER1_type 1 436 0 2224 273 137 30 chr2 7433934 7434931 -243252923 - HAL1 LINE L1 -7 2500 1397 197 267 0 0 chr2 7435040 7435085 -243252769 + MIR SINE MIR 107 151 -111 369 183 0 0 chr2 7435223 7435294 -243252560 - AluJ/FRAM SINE Alu 0 302 232 2410 308 67 25 chr2 7435314 7435936 -243251918 - HAL1 LINE L1 -1189 1318 724 2363 127 36 28 chr2 7435936 7436297 -243251557 - THE1B LTR MaLR 0 364 1 2410 308 67 25 chr2 7436297 7436937 -243250917 - HAL1 LINE L1 -1783 724 3 1648 200 7 0 chr2 7437189 7437499 -243250355 + AluJo SINE Alu 1 312 0 2219 104 0 20 chr2 7437558 7437857 -243249997 + AluSc SINE Alu 1 293 -16 216 0 0 0 chr2 7437951 7437975 -243249879 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 1252 188 31 100 chr2 7438437 7438593 -243249261 + MLT1B LTR MaLR 21 186 -204 1916 133 20 20 chr2 7438593 7438894 -243248960 + AluSg SINE Alu 1 301 -9 1252 188 31 100 chr2 7438894 7439126 -243248728 + MLT1B LTR MaLR 186 382 -8 549 278 80 6 chr2 7440137 7440313 -243247541 + Charlie1 DNA MER1_type 1 189 -2572 2203 93 33 0 chr2 7440375 7440676 -243247178 + AluY SINE Alu 1 311 0 249 98 0 157 chr2 7440676 7440727 -243247127 - U6 snRNA snRNA -1 106 64 473 278 15 0 chr2 7440727 7440860 -243246994 + Charlie1 DNA MER1_type 2626 2760 -1 21 36 0 0 chr2 7441406 7441434 -243246420 + AT_rich Low_complexity Low_complexity 1 28 0 1535 184 0 21 chr2 7441548 7441831 -243246023 - AluJo SINE Alu -33 279 3 21 0 0 0 chr2 7442182 7442203 -243245651 + AT_rich Low_complexity Low_complexity 1 21 0 305 216 53 88 chr2 7442405 7442576 -243245278 + L1ME4a LINE L1 5260 5424 -2384 311 288 194 0 chr2 7442792 7442931 -243244923 + MIR SINE MIR 84 249 -13 342 0 0 0 chr2 7442948 7442986 -243244868 + (TG)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 7442985 7443014 -243244840 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1956 118 0 15 chr2 7443019 7443291 -243244563 - AluSx SINE Alu -44 268 1 228 67 0 0 chr2 7444707 7444737 -243243117 + (T)n Simple_repeat Simple_repeat 1 30 0 694 263 99 65 chr2 7445841 7446396 -243241458 + L1ME4a LINE L1 5524 6097 -24 2203 101 3 10 chr2 7446671 7446969 -243240885 + AluSx SINE Alu 1 296 -16 1741 169 3 3 chr2 7447293 7447583 -243240271 + AluJb SINE Alu 7 296 -16 2503 131 28 17 chr2 7448286 7448646 -243239208 - THE1B LTR MaLR 0 364 1 2576 47 3 31 chr2 7448761 7449079 -243238775 - AluY SINE Alu -2 309 1 626 266 7 26 chr2 7449212 7449366 -243238488 + MER45A DNA AcHobo 3 153 -25 1653 262 43 15 chr2 7450790 7451404 -243236450 - L1MD3 LINE L1 -10 7985 7258 256 50 75 0 chr2 7451411 7451451 -243236403 - L1MA2 LINE L1 0 6304 6262 314 105 88 0 chr2 7451453 7451510 -243236344 + L1MA2 LINE L1 6225 6286 -18 755 284 74 40 chr2 7451539 7451995 -243235859 - L1ME1 LINE L1 -264 5902 5407 364 298 34 58 chr2 7452698 7452906 -243234948 + MIR SINE MIR 59 261 -1 2099 66 7 42 chr2 7452938 7453224 -243234630 + AluSp SINE Alu 1 276 -37 321 339 54 0 chr2 7453410 7453540 -243234314 + L2 LINE L2 3133 3269 -3 199 269 19 0 chr2 7455386 7455438 -243232416 + L2 LINE L2 3242 3294 -19 235 349 42 12 chr2 7455475 7455641 -243232213 - MIR SINE MIR -4 258 88 297 0 0 0 chr2 7455682 7455715 -243232139 + (CA)n Simple_repeat Simple_repeat 2 34 0 2228 114 3 0 chr2 7455794 7456091 -243231763 - AluSx SINE Alu -14 298 1 182 312 101 43 chr2 7456330 7456468 -243231386 - L2 LINE L2 0 3272 3127 3755 160 13 61 chr2 7456601 7457016 -243230838 - L1MA10 LINE L1 -3 6331 5967 1846 177 0 16 chr2 7457016 7457333 -243230521 - AluJb SINE Alu 0 312 1 3755 160 13 61 chr2 7457333 7457673 -243230181 - L1MA10 LINE L1 -367 5967 5612 310 121 30 0 chr2 7458320 7458386 -243229468 + CT-rich Low_complexity Low_complexity 2 69 0 378 42 0 0 chr2 7458388 7458436 -243229418 + (CA)n Simple_repeat Simple_repeat 1 48 0 250 270 176 0 chr2 7461531 7461605 -243226249 + L2 LINE L2 3186 3272 0 254 296 12 0 chr2 7461605 7461686 -243226168 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 624 328 129 13 chr2 7461749 7462353 -243225501 + L2 LINE L2 2141 2814 -500 285 284 119 34 chr2 7462425 7462601 -243225253 + L2 LINE L2 2890 3080 -192 514 106 0 32 chr2 7463272 7463288 -243224566 + (GAAA)n Simple_repeat Simple_repeat 2 17 -75 1132 189 242 4 chr2 7463288 7463532 -243224322 + AluJb SINE Alu 1 302 0 514 106 0 32 chr2 7463532 7463609 -243224245 + (GAAA)n Simple_repeat Simple_repeat 17 92 0 281 328 53 8 chr2 7463891 7464022 -243223832 - MIR3 SINE MIR -61 147 11 2212 105 0 16 chr2 7464204 7464508 -243223346 - AluSx SINE Alu -13 299 1 675 234 34 34 chr2 7464963 7465170 -243222684 + L1ME LINE L1 5516 5719 -402 227 57 29 0 chr2 7465430 7465465 -243222389 + L1ME4a LINE L1 6085 6120 -1 198 304 76 13 chr2 7466522 7466601 -243221253 - MER5A DNA MER1_type -51 138 55 1258 316 113 14 chr2 7466777 7467432 -243220422 + L3 LINE CR1 615 1334 -243 216 328 59 51 chr2 7467479 7467735 -243220119 + L2 LINE L2 2844 3101 -171 215 204 0 0 chr2 7467855 7467899 -243219955 + GA-rich Low_complexity Low_complexity 1 44 0 3816 185 36 30 chr2 7468633 7469476 -243218378 + L1MB7 LINE L1 5337 6184 0 298 336 22 52 chr2 7471356 7471490 -243216364 - L2 LINE L2 -4 3268 3139 362 271 114 43 chr2 7472002 7472283 -243215571 - L1M4 LINE L1 -1771 4375 4075 24 53 0 0 chr2 7472651 7472689 -243215165 + AT_rich Low_complexity Low_complexity 1 38 0 191 416 112 0 chr2 7472695 7472820 -243215034 + L2 LINE L2 3134 3272 0 2644 197 18 9 chr2 7475540 7476089 -243211765 + MER89 LTR ERV1 4 557 -2 245 297 27 0 chr2 7476971 7477045 -243210809 + CT-rich Low_complexity Low_complexity 1 76 0 502 277 15 8 chr2 7477439 7477569 -243210285 + MER94 DNA DNA 3 133 -1 4119 112 30 11 chr2 7478398 7479021 -243208833 + MER41B LTR ERV1 1 635 0 2978 215 88 110 chr2 7479959 7481213 -243206641 + MER69B DNA AcHobo 1 1226 0 687 251 52 11 chr2 7481827 7482018 -243205836 - MLT2B1 LTR ERVL -3 517 319 1796 202 17 17 chr2 7482036 7482397 -243205457 + MLT1A2 LTR MaLR 14 374 0 1283 212 7 15 chr2 7482467 7482736 -243205118 - MLT2B1 LTR ERVL -253 267 1 1640 209 33 22 chr2 7482970 7483338 -243204516 - MLT1A2 LTR MaLR 0 374 3 13669 139 36 46 chr2 7483551 7485859 -243201995 + Tigger1 DNA MER2_type 14 2297 -121 1910 115 70 0 chr2 7485859 7486129 -243201725 + AluSx SINE Alu 9 297 -15 13669 139 36 46 chr2 7486129 7486250 -243201604 + Tigger1 DNA MER2_type 2297 2418 0 196 284 75 0 chr2 7486658 7486725 -243201129 + MIR3 SINE MIR 114 185 -23 186 380 70 6 chr2 7488087 7488258 -243199596 - MIR SINE MIR -80 182 1 2065 92 4 0 chr2 7488540 7488801 -243199053 + AluSq SINE Alu 36 297 -16 194 62 31 0 chr2 7489026 7489058 -243198796 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 309 174 0 0 chr2 7490211 7490280 -243197574 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 208 298 83 24 chr2 7490299 7490383 -243197471 - MIR SINE MIR -70 192 104 333 322 65 37 chr2 7494455 7494669 -243193185 - MIR SINE MIR -11 251 32 2910 19 0 0 chr2 7495284 7495601 -243192253 - AluYb8 SINE Alu -1 317 1 530 223 30 81 chr2 7495650 7495786 -243192068 - MER112 DNA MER1_type -7 253 128 885 241 39 0 chr2 7495786 7495993 -243191861 + MER20 DNA MER1_type 4 218 -1 530 223 30 81 chr2 7495993 7496053 -243191801 - MER112 DNA MER1_type -132 128 67 228 35 0 0 chr2 7496173 7496202 -243191652 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 213 0 80 chr2 7496538 7496613 -243191241 - MIR SINE MIR -78 184 116 303 244 24 0 chr2 7497836 7497918 -243189936 + L2 LINE L2 3133 3216 -56 209 195 0 0 chr2 7498004 7498045 -243189809 + L2 LINE L2 3265 3305 -8 229 169 28 84 chr2 7498098 7498169 -243189685 + L2 LINE L2 3201 3267 -5 32499 31 4 0 chr2 7498706 7503319 -243184535 + L1PA3 LINE L1 1527 6155 0 472 147 13 0 chr2 7503571 7503646 -243184208 - MER58 DNA MER1_type 0 2420 2345 259 175 18 53 chr2 7503674 7503731 -243184123 - MER58 DNA MER1_type -157 58 4 218 288 0 0 chr2 7504270 7504329 -243183525 + MIR SINE MIR 71 129 -133 21 0 0 0 chr2 7505151 7505172 -243182682 + AT_rich Low_complexity Low_complexity 1 21 0 183 271 35 35 chr2 7505177 7505262 -243182592 - MIR SINE MIR -102 160 76 294 29 0 0 chr2 7505462 7505497 -243182357 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 7506762 7506784 -243181070 + AT_rich Low_complexity Low_complexity 1 22 0 1673 167 27 27 chr2 7507487 7507787 -243180067 + AluJo SINE Alu 1 300 -12 380 301 92 10 chr2 7508111 7508307 -243179547 + MIR SINE MIR 13 224 -38 449 283 7 0 chr2 7508395 7508540 -243179314 - MER117 DNA MER1_type -47 150 5 410 286 8 0 chr2 7509402 7509521 -243178333 + MIR SINE MIR 114 233 -29 1403 137 24 9 chr2 7509892 7510319 -243177535 + LTR54 LTR ERV1 2 510 0 397 175 19 0 chr2 7510322 7510425 -243177429 + (CA)n Simple_repeat Simple_repeat 2 106 0 662 277 59 4 chr2 7510966 7511204 -243176650 + MIR SINE MIR 3 253 -9 1079 137 0 120 chr2 7511278 7511512 -243176342 + L1MB5 LINE L1 5963 6168 -6 185 196 20 0 chr2 7511515 7511566 -243176288 + GA-rich Low_complexity Low_complexity 1 52 0 214 279 0 15 chr2 7512141 7512209 -243175645 + A-rich Low_complexity Low_complexity 2 68 0 226 205 72 48 chr2 7513929 7514012 -243173842 - L3 LINE CR1 -1 1576 1492 182 332 45 65 chr2 7514526 7514725 -243173129 - L2 LINE L2 -18 3254 3060 2096 128 155 13 chr2 7516723 7517098 -243170756 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr2 7517263 7517285 -243170569 + AT_rich Low_complexity Low_complexity 1 22 0 267 303 0 13 chr2 7518317 7518393 -243169461 - MIR SINE MIR -26 236 162 297 129 32 32 chr2 7518396 7518458 -243169396 - MLT2B1 LTR ERVL 0 520 459 232 271 12 24 chr2 7518458 7518543 -243169311 - L1MC4 LINE L1 -1345 6697 6614 491 270 6 0 chr2 7518544 7518718 -243169136 + (TA)n Simple_repeat Simple_repeat 1 175 0 342 0 0 0 chr2 7518749 7518787 -243169067 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 196 39 0 chr2 7518788 7518839 -243169015 + MLT2B1 LTR ERVL 468 520 0 242 271 59 0 chr2 7519026 7519111 -243168743 - L1MC4 LINE L1 -1339 6703 6614 244 160 40 0 chr2 7519150 7519200 -243168654 + MLT2B1 LTR ERVL 464 515 -5 288 253 0 13 chr2 7519205 7519284 -243168570 + MIR SINE MIR 159 236 -26 2410 150 7 6 chr2 7519327 7519711 -243168143 - MLT2D LTR ERVL -40 480 1 366 327 32 6 chr2 7519711 7519867 -243167987 - MIR SINE MIR -99 163 4 186 236 0 0 chr2 7520161 7520216 -243167638 + (TG)n Simple_repeat Simple_repeat 1 55 0 361 347 40 6 chr2 7520385 7520561 -243167293 + MIR SINE MIR 47 228 -34 1913 147 10 10 chr2 7520698 7520990 -243166864 + AluSx SINE Alu 1 292 -20 251 340 65 50 chr2 7521823 7522410 -243165444 - L2 LINE L2 -25 3247 2654 2222 218 23 14 chr2 7522411 7522893 -243164961 + L1MB5 LINE L1 5663 6139 -41 2162 86 0 7 chr2 7522893 7523171 -243164683 + AluY SINE Alu 1 276 -35 270 0 0 0 chr2 7523176 7523206 -243164648 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2222 218 23 14 chr2 7523206 7523246 -243164608 + L1MB5 LINE L1 6142 6180 0 597 270 110 5 chr2 7523548 7523748 -243164106 - Charlie8 DNA MER1_type -2193 224 4 1163 263 71 30 chr2 7524237 7524728 -243163126 - LTR53 LTR ERVL -8 511 1 500 280 54 18 chr2 7525100 7525268 -243162586 - MIR SINE MIR -61 201 28 252 0 0 0 chr2 7525557 7525585 -243162269 + (TA)n Simple_repeat Simple_repeat 2 29 0 310 277 69 10 chr2 7526498 7526599 -243161255 + MIR SINE MIR 112 218 -44 2431 134 22 3 chr2 7526616 7526973 -243160881 + THE1B LTR MaLR 1 364 0 688 265 23 55 chr2 7527019 7527276 -243160578 - MIR SINE MIR 0 262 14 387 247 11 0 chr2 7527332 7527425 -243160429 - MIR SINE MIR -74 188 95 691 224 21 0 chr2 7527502 7527645 -243160209 + MIR SINE MIR 20 165 -97 186 43 0 0 chr2 7527678 7527701 -243160153 + (TAA)n Simple_repeat Simple_repeat 2 24 0 284 205 137 43 chr2 7527754 7527871 -243159983 + MER5A DNA MER1_type 9 136 -53 244 340 21 0 chr2 7528441 7528538 -243159316 - MER5A DNA MER1_type -5 184 86 2147 178 63 25 chr2 7528540 7528803 -243159051 - MLT1C LTR MaLR -1 466 178 348 24 0 0 chr2 7528803 7528844 -243159010 + (TG)n Simple_repeat Simple_repeat 2 42 0 2147 178 63 25 chr2 7528844 7529023 -243158831 - MLT1C LTR MaLR -289 178 7 191 59 0 59 chr2 7529392 7529426 -243158428 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 360 0 0 0 chr2 7532860 7532900 -243154954 + (CA)n Simple_repeat Simple_repeat 1 40 0 2443 53 0 16 chr2 7532929 7533232 -243154622 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 7533290 7533311 -243154543 + AT_rich Low_complexity Low_complexity 1 21 0 1176 137 0 0 chr2 7534329 7534497 -243153357 - AluSg/x SINE Alu -8 304 137 2275 114 3 0 chr2 7534791 7535099 -243152755 - AluSp SINE Alu -4 309 1 425 87 159 0 chr2 7537098 7537167 -243150687 + MADE1 DNA Mariner 1 80 0 862 165 0 0 chr2 7537819 7537952 -243149902 + FLAM_C SINE Alu 6 138 -5 2208 106 3 3 chr2 7538579 7538881 -243148973 - AluSp SINE Alu -11 302 1 350 274 21 17 chr2 7539368 7539567 -243148287 - L1ME4a LINE L1 -188 5933 5698 376 369 122 4 chr2 7539695 7539950 -243147904 - L3 LINE CR1 -864 713 429 206 62 31 0 chr2 7540102 7540134 -243147720 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 207 265 0 29 chr2 7540987 7541055 -243146799 - MIR SINE MIR 0 262 197 2067 132 35 6 chr2 7541059 7541370 -243146484 - MER2 DNA MER2_type -5 340 21 644 265 24 12 chr2 7541379 7541545 -243146309 - MIR SINE MIR -88 174 7 196 260 73 52 chr2 7541621 7541717 -243146137 - MIR SINE MIR -163 99 2 245 302 137 40 chr2 7542838 7542903 -243144951 - MIR SINE MIR 0 262 205 321 26 0 0 chr2 7542903 7542941 -243144913 + (TG)n Simple_repeat Simple_repeat 2 39 0 245 302 137 40 chr2 7542941 7543082 -243144772 - MIR SINE MIR -57 205 39 229 326 102 17 chr2 7544887 7545023 -243142831 + MIR3 SINE MIR 35 189 -19 364 322 66 61 chr2 7545220 7545677 -243142177 + L1M4 LINE L1 4818 5276 -870 6939 208 69 44 chr2 7545701 7547638 -243140216 + L1MDa LINE L1 311 2295 -4245 302 212 0 212 chr2 7547674 7547810 -243140044 + L1MDa LINE L1 2956 3029 -3511 2529 83 0 0 chr2 7547810 7548123 -243139731 - AluSq SINE Alu 0 313 1 302 212 0 212 chr2 7548123 7548208 -243139646 + L1MDa LINE L1 3029 3130 -3410 265 107 18 36 chr2 7548210 7548266 -243139588 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 1808 289 47 7 chr2 7548279 7548996 -243138858 + L1MDa LINE L1 3134 3879 -2661 711 242 50 0 chr2 7549026 7549187 -243138667 + L1MD1 LINE L1 6055 6223 -19 618 265 52 45 chr2 7549364 7549768 -243138086 + L1MEc LINE L1 801 1207 -5356 1033 164 61 5 chr2 7549780 7549994 -243137860 + AluJb SINE Alu 86 311 -1 262 304 44 0 chr2 7550023 7550158 -243137696 + L1MEc LINE L1 1246 1386 -5177 1596 263 72 63 chr2 7550175 7550305 -243137549 + L1MEc LINE L1 1334 1461 -4921 1507 164 33 18 chr2 7550305 7550580 -243137274 + AluSq SINE Alu 23 301 -12 1596 263 72 63 chr2 7550580 7551693 -243136161 + L1MEc LINE L1 1461 2701 -3681 30611 33 0 1 chr2 7551699 7556078 -243131776 + L1PA4 LINE L1 1777 6152 -3 3827 231 42 35 chr2 7556093 7557345 -243130509 + L1MEc LINE L1 2709 3969 -2413 192 158 0 0 chr2 7557606 7557644 -243130210 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 7557855 7557876 -243129978 + AT_rich Low_complexity Low_complexity 1 21 0 182 203 108 54 chr2 7558027 7558101 -243129753 + MIR SINE MIR 112 189 -73 2153 74 15 4 chr2 7558134 7558405 -243129449 - AluSc SINE Alu -7 302 29 735 285 45 4 chr2 7558502 7558748 -243129106 + MIR SINE MIR 3 258 -4 409 317 94 6 chr2 7559251 7559431 -243128423 + MIR SINE MIR 53 248 -14 25 0 0 0 chr2 7559884 7559909 -243127945 + AT_rich Low_complexity Low_complexity 1 25 0 1008 72 0 226 chr2 7560006 7560227 -243127627 - Charlie3 DNA MER1_type -8 2702 2532 321 322 72 90 chr2 7560275 7560620 -243127234 - L1MEd LINE L1 -5769 350 12 23 0 0 0 chr2 7560640 7560663 -243127191 + AT_rich Low_complexity Low_complexity 1 23 0 281 233 189 83 chr2 7560877 7561057 -243126797 - MLT1J LTR MaLR -189 322 124 280 271 90 14 chr2 7561620 7561764 -243126090 - HAL1b LINE L1 -511 837 683 298 236 36 0 chr2 7561764 7561874 -243125980 + CT-rich Low_complexity Low_complexity 4 117 0 340 330 52 16 chr2 7562031 7562225 -243125629 - HAL1b LINE L1 -801 547 347 355 223 18 0 chr2 7562751 7562863 -243124991 + (TA)n Simple_repeat Simple_repeat 2 115 0 198 143 0 0 chr2 7564391 7564426 -243123428 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 360 12 0 chr2 7564426 7564512 -243123342 + L3 LINE CR1 1335 1421 -156 948 122 23 0 chr2 7565746 7565918 -243121936 + CT-rich Low_complexity Low_complexity 4 179 0 282 29 0 0 chr2 7566057 7566092 -243121762 + (TG)n Simple_repeat Simple_repeat 1 35 0 182 265 20 0 chr2 7566499 7566548 -243121306 - L2 LINE L2 -1 3312 3263 180 0 0 0 chr2 7566751 7566771 -243121083 + (A)n Simple_repeat Simple_repeat 1 20 0 274 178 68 14 chr2 7566908 7566981 -243120873 + MER116 DNA Mariner 2 78 -2 824 234 10 39 chr2 7569337 7569542 -243118312 + MER58A DNA MER1_type 21 219 -5 249 312 104 40 chr2 7569784 7569986 -243117868 - L3 LINE CR1 -26 1551 1337 304 370 7 22 chr2 7570370 7570505 -243117349 + MIR3 SINE MIR 10 142 -66 224 277 71 36 chr2 7571150 7571262 -243116592 + MER5A DNA MER1_type 10 125 -64 2132 117 176 16 chr2 7571329 7571698 -243116156 - MSTA LTR MaLR 0 428 1 1007 167 0 0 chr2 7571913 7572069 -243115785 + AluSg/x SINE Alu 135 290 -20 312 307 97 40 chr2 7572079 7572307 -243115547 - L2 LINE L2 -924 2390 2150 185 116 0 47 chr2 7572294 7572337 -243115517 + (GAGAA)n Simple_repeat Simple_repeat 5 45 0 * 1969 201 52 0 chr2 7574126 7574530 -243113324 - MLT1C LTR MaLR -9 458 34 189 154 0 0 chr2 7574533 7574572 -243113282 + T-rich Low_complexity Low_complexity 1 39 0 244 366 20 0 chr2 7574612 7574713 -243113141 - L2 LINE L2 -28 3244 3142 376 278 148 61 chr2 7575329 7575559 -243112295 + MIR SINE MIR 5 254 -8 205 323 15 0 chr2 7575638 7575703 -243112151 + L2 LINE L2 3207 3272 0 2689 148 38 68 chr2 7576485 7576671 -243111183 - L1MA4 LINE L1 -8 6292 6102 1905 141 11 7 chr2 7576671 7576955 -243110899 + AluSx SINE Alu 1 285 -27 2689 148 38 68 chr2 7576955 7576968 -243110886 - L1MA4 LINE L1 -198 6102 6090 288 0 0 0 chr2 7576968 7577000 -243110854 + (TA)n Simple_repeat Simple_repeat 1 32 0 2689 148 38 68 chr2 7577000 7577359 -243110495 - L1MA4 LINE L1 -210 6090 5750 289 289 0 0 chr2 7578417 7578500 -243109354 + MIR SINE MIR 172 254 -8 1798 188 61 54 chr2 7578566 7579264 -243108590 + L1ME4a LINE L1 2074 2755 -3785 1047 161 11 0 chr2 7579266 7579440 -243108414 + AluSg/x SINE Alu 137 312 0 6933 231 91 47 chr2 7579440 7582618 -243105236 + L1ME4a LINE L1 2746 6066 -687 537 95 24 0 chr2 7582626 7582710 -243105144 + L1MD2 LINE L1 6272 6357 -2 222 272 27 95 chr2 7582753 7582900 -243104954 + L2 LINE L2 3168 3304 -9 426 313 97 14 chr2 7583187 7583404 -243104450 - MIR SINE MIR 0 262 28 1780 188 0 0 chr2 7583523 7583836 -243104018 - AluJb SINE Alu 0 313 1 2111 115 26 10 chr2 7584250 7584554 -243103300 + AluSq SINE Alu 1 309 -4 450 287 8 0 chr2 7586957 7587079 -243100775 + MER94 DNA DNA 7 129 -5 320 260 7 55 chr2 7588315 7588461 -243099393 + L1ME4a LINE L1 6362 6500 -15 843 159 0 0 chr2 7589792 7589924 -243097930 + FLAM_C SINE Alu 2 133 0 225 231 51 51 chr2 7590219 7590297 -243097557 + MIR SINE MIR 111 188 -74 33 66 0 0 chr2 7590411 7590472 -243097382 + AT_rich Low_complexity Low_complexity 1 61 0 195 129 0 0 chr2 7590904 7590935 -243096919 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 183 184 20 20 chr2 7591191 7591240 -243096614 + MIR SINE MIR 25 73 -135 1302 171 80 47 chr2 7592263 7592562 -243095292 + AluJo SINE Alu 4 312 0 1320 219 67 31 chr2 7593829 7594189 -243093665 - MLT1B LTR MaLR -2 388 14 189 242 0 15 chr2 7594736 7594802 -243093052 - L2 LINE L2 -3 3269 3205 314 245 0 57 chr2 7595270 7595400 -243092454 + MIR SINE MIR 85 205 -57 280 284 159 28 chr2 7595502 7595678 -243092176 + MIR SINE MIR 21 219 -43 1931 173 80 30 chr2 7596090 7596504 -243091350 - MLT2D LTR ERVL 0 534 1 334 278 31 0 chr2 7596504 7596601 -243091253 + L2 LINE L2 3172 3271 -1 227 313 117 0 chr2 7597274 7597402 -243090452 - MIR3 SINE MIR -24 184 42 2946 198 37 7 chr2 7598922 7599537 -243088317 - MER99 DNA DNA -3 825 192 38 22 0 0 chr2 7600171 7600216 -243087638 + AT_rich Low_complexity Low_complexity 1 45 0 482 272 0 0 chr2 7600216 7600319 -243087535 - MER99 DNA DNA -724 104 2 353 283 126 31 chr2 7600861 7601084 -243086770 - LTR16A LTR ERVL -1 449 206 1603 181 54 7 chr2 7601243 7601541 -243086313 - AluJo SINE Alu 0 312 1 1223 248 97 16 chr2 7602903 7603456 -243084398 + L1MEc LINE L1 2202 2770 -3445 743 343 65 14 chr2 7603456 7604022 -243083832 - L1MEc LINE L1 -5754 642 48 560 269 22 0 chr2 7604307 7604441 -243083413 + MLT1J1 LTR MaLR 2 138 -308 2394 103 0 0 chr2 7604763 7605065 -243082789 - AluSx SINE Alu -10 302 1 283 286 60 0 chr2 7605471 7605555 -243082299 + LTR50 LTR ERVL 1 89 -706 1708 188 3 13 chr2 7607083 7607397 -243080457 + AluJb SINE Alu 1 311 -1 2277 163 143 13 chr2 7608025 7608544 -243079310 + LTR49 LTR ERV1 1 653 0 2028 246 51 22 chr2 7609064 7609609 -243078245 - MER119 DNA MER1_type -5 578 18 296 278 122 0 chr2 7609668 7609783 -243078071 + MIR SINE MIR 43 171 -37 271 296 44 37 chr2 7609903 7610038 -243077816 - MER5A DNA MER1_type -36 153 18 394 290 82 30 chr2 7611459 7611612 -243076242 - MIR SINE MIR -13 249 79 1967 132 31 0 chr2 7611612 7611899 -243075955 - AluY SINE Alu -15 296 1 394 290 82 30 chr2 7611899 7611976 -243075878 - MIR SINE MIR -183 79 7 1863 149 3 10 chr2 7612005 7612293 -243075561 + AluSx SINE Alu 1 286 -26 1128 184 130 27 chr2 7614574 7614873 -243072981 + MLT1C LTR MaLR 1 330 -137 687 241 0 14 chr2 7615044 7615185 -243072669 + MLT1C LTR MaLR 329 467 0 188 234 0 0 chr2 7616525 7616572 -243071282 - L2 LINE L2 -5 3308 3262 305 221 207 21 chr2 7616861 7617006 -243070848 + MIR SINE MIR 76 247 -15 2563 98 16 19 chr2 7617519 7617895 -243069959 + THE1C LTR MaLR 1 375 0 209 293 73 16 chr2 7619831 7619954 -243067900 + L2 LINE L2 3184 3313 0 23 54 0 0 chr2 7621064 7621101 -243066753 + AT_rich Low_complexity Low_complexity 1 37 0 203 388 0 0 chr2 7621515 7621595 -243066259 + L2 LINE L2 3190 3269 -3 2048 134 30 35 chr2 7621665 7622031 -243065823 + THE1B LTR MaLR 1 364 0 237 291 27 18 chr2 7623067 7623177 -243064677 - MER87 LTR ERV1 -32 509 399 195 364 34 17 chr2 7623549 7623667 -243064187 + MIR3 SINE MIR 4 123 -85 561 294 93 4 chr2 7623910 7624179 -243063675 - L1MCb LINE L1 -5163 882 590 26 0 0 0 chr2 7624313 7624339 -243063515 + AT_rich Low_complexity Low_complexity 1 26 0 321 335 34 28 chr2 7624518 7624694 -243063160 + MER5B DNA MER1_type 2 178 0 196 346 19 0 chr2 7624705 7624809 -243063045 + MER5A DNA MER1_type 4 109 -80 1343 229 15 76 chr2 7624879 7625285 -243062569 - MLT1B LTR MaLR -9 381 1 5307 98 35 4 chr2 7625438 7626189 -243061665 + MER4E LTR ERV1 1 774 -5 2003 114 4 0 chr2 7627188 7627491 -243060363 - AluSx SINE Alu 0 304 1 2037 108 10 25 chr2 7628105 7628419 -243059435 + AluSp SINE Alu 1 309 -4 204 322 77 7 chr2 7629018 7629161 -243058693 - MIR SINE MIR -62 200 48 264 317 12 0 chr2 7630069 7630151 -243057703 - MIR SINE MIR -107 155 73 663 153 0 0 chr2 7630261 7630392 -243057462 + (TAG)n Simple_repeat Simple_repeat 2 132 0 427 206 125 22 chr2 7630393 7630529 -243057325 - MIR SINE MIR -1 261 112 21 0 0 0 chr2 7632170 7632191 -243055663 + AT_rich Low_complexity Low_complexity 1 21 0 2106 96 4 0 chr2 7633748 7634062 -243053792 + AluSx SINE Alu 1 315 0 456 311 38 16 chr2 7634454 7634637 -243053217 + MIR SINE MIR 8 194 -68 213 94 0 0 chr2 7635135 7635167 -243052687 + (TCC)n Simple_repeat Simple_repeat 2 33 0 214 308 77 10 chr2 7635433 7635537 -243052317 - MIR SINE MIR -50 212 102 187 216 0 78 chr2 7636213 7636264 -243051590 - L2 LINE L2 -6 3307 3261 598 219 139 0 chr2 7638898 7639049 -243048805 + MIR SINE MIR 47 218 -44 1337 225 8 0 chr2 7640622 7640871 -243046983 + MLT1C LTR MaLR 207 457 -10 274 227 13 27 chr2 7640929 7641004 -243046850 + Charlie7 DNA MER1_type 29 102 -2510 23 68 0 0 chr2 7641108 7641152 -243046702 + AT_rich Low_complexity Low_complexity 1 44 0 2012 137 0 0 chr2 7641234 7641534 -243046320 + AluSq SINE Alu 11 310 -3 479 309 124 18 chr2 7642271 7642488 -243045366 + MIR SINE MIR 12 251 -11 2174 282 129 18 chr2 7643401 7644274 -243043580 + L2 LINE L2 1576 2545 -769 15569 123 27 5 chr2 7644344 7646704 -243041150 - Tigger1 DNA MER2_type -6 2412 1 304 240 62 121 chr2 7646839 7647294 -243040560 - L1MCc LINE L1 -4892 1531 1300 2396 97 77 3 chr2 7647425 7647764 -243040090 + THE1B LTR MaLR 1 364 0 294 333 140 0 chr2 7648101 7648215 -243039639 + MIR SINE MIR 97 226 -36 418 326 80 29 chr2 7649994 7650169 -243037685 - MIR3 SINE MIR -5 203 20 204 221 143 52 chr2 7650470 7650624 -243037230 - MIR3 SINE MIR -34 174 7 351 304 52 26 chr2 7650652 7650767 -243037087 - L2 LINE L2 -4 3309 3192 519 261 56 6 chr2 7651230 7651391 -243036463 - MER5B DNA MER1_type -8 170 2 2113 98 44 3 chr2 7651494 7651791 -243036063 + AluSq SINE Alu 1 309 -4 1028 119 68 6 chr2 7651852 7652029 -243035825 + MER53 DNA DNA 2 189 0 2017 140 7 0 chr2 7652223 7652531 -243035323 - AluSx SINE Alu -2 310 1 240 210 84 119 chr2 7652608 7652751 -243035103 - MIR SINE MIR -40 222 85 1205 199 66 6 chr2 7653635 7654073 -243033781 - MLT2B1 LTR ERVL 0 515 1 205 238 0 0 chr2 7654319 7654361 -243033493 + (CACG)n Simple_repeat Simple_repeat 4 45 0 2118 101 20 7 chr2 7654822 7655119 -243032735 - AluSx SINE Alu -11 301 1 245 360 141 27 chr2 7655442 7655853 -243032001 + L2 LINE L2 2851 3308 -5 279 0 0 0 chr2 7656213 7656244 -243031610 + (CACAA)n Simple_repeat Simple_repeat 4 34 0 2310 84 3 3 chr2 7656863 7657171 -243030683 - AluSp SINE Alu -5 308 1 295 268 14 0 chr2 7657171 7657242 -243030612 - MER5A DNA MER1_type -112 77 6 533 278 36 29 chr2 7660147 7660424 -243027430 + L1ME3A LINE L1 3803 4081 -2065 1970 153 38 46 chr2 7660426 7660793 -243027061 - THE1B LTR MaLR 0 364 1 364 327 36 0 chr2 7660836 7660946 -243026908 + MIR SINE MIR 16 129 -133 1699 182 90 54 chr2 7660952 7661396 -243026458 + MER31B LTR ERV1 7 466 0 511 260 0 0 chr2 7661403 7661530 -243026324 + MIR SINE MIR 136 262 0 21 0 0 0 chr2 7661608 7661629 -243026225 + AT_rich Low_complexity Low_complexity 1 21 0 1951 111 18 0 chr2 7661674 7661977 -243025877 + AluSp SINE Alu 1 308 0 328 293 79 0 chr2 7662058 7662273 -243025581 + L1ME3A LINE L1 4388 4619 -1527 237 233 58 39 chr2 7662323 7662426 -243025428 + L1ME3A LINE L1 4733 4837 -1309 357 281 80 76 chr2 7662457 7662681 -243025173 - MIR SINE MIR -4 258 34 233 179 0 0 chr2 7662984 7663023 -243024831 + L1ME3A LINE L1 5670 5708 -413 335 299 103 8 chr2 7663036 7663153 -243024701 + L1ME3A LINE L1 5743 5870 -300 1912 156 0 0 chr2 7663454 7663761 -243024093 + AluSx SINE Alu 1 307 -5 1212 302 160 43 chr2 7663770 7664320 -243023534 - L2 LINE L2 -633 2681 2197 2149 182 31 43 chr2 7664320 7664831 -243023023 + MLT1D LTR MaLR 1 505 0 1212 302 160 43 chr2 7664831 7665256 -243022598 - L2 LINE L2 -1117 2197 1592 432 336 32 19 chr2 7665340 7665584 -243022270 - LTR16A LTR ERVL -184 266 17 180 111 0 0 chr2 7665835 7665862 -243021992 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 194 348 29 0 chr2 7665921 7665990 -243021864 + MIR SINE MIR 64 134 -128 198 0 0 0 chr2 7666735 7666757 -243021097 + (TC)n Simple_repeat Simple_repeat 1 22 0 252 200 42 83 chr2 7667430 7667550 -243020304 + L1M4 LINE L1 2302 2416 -3730 195 42 0 0 chr2 7667583 7667607 -243020247 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 710 296 73 52 chr2 7667750 7667761 -243020093 - LTR16A LTR ERVL -59 398 389 2360 120 3 55 chr2 7667761 7668145 -243019709 + THE1B LTR MaLR 1 364 0 710 296 73 52 chr2 7668145 7668499 -243019355 - LTR16A LTR ERVL -68 389 16 654 352 43 26 chr2 7668647 7669229 -243018625 - HERV16 LTR ERVL -381 5383 4792 990 317 85 38 chr2 7669347 7670184 -243017670 - HERV16 LTR ERVL -879 4606 3718 1108 350 72 3 chr2 7670687 7671218 -243016636 - HERV16 LTR ERVL -1905 3091 2617 1167 291 81 31 chr2 7671421 7672285 -243015569 - HERV16 LTR ERVL -2381 2615 1715 1170 307 124 22 chr2 7672335 7673135 -243014719 - HERV16 LTR ERVL -3420 1576 818 753 77 19 0 chr2 7673167 7673271 -243014583 - AluY SINE Alu -9 302 197 284 315 63 9 chr2 7673295 7673406 -243014448 - HERV16 LTR ERVL -4347 649 533 278 277 0 0 chr2 7673474 7673539 -243014315 - HERV16 LTR ERVL -4570 426 362 768 264 30 26 chr2 7673733 7673964 -243013890 - LTR16A LTR ERVL -13 437 206 186 43 0 0 chr2 7674332 7674355 -243013499 + (TTG)n Simple_repeat Simple_repeat 2 24 0 763 162 0 0 chr2 7674364 7674481 -243013373 - FLAM_C SINE Alu -16 117 1 487 172 11 11 chr2 7674566 7674659 -243013195 - AluJ/FLAM SINE Alu -218 94 2 215 185 77 0 chr2 7675226 7675291 -243012563 + L2 LINE L2 3168 3237 -35 506 272 30 18 chr2 7676112 7676281 -243011573 + MIR SINE MIR 53 223 -39 187 359 23 23 chr2 7676462 7676593 -243011261 + MIR3 SINE MIR 51 181 -27 269 355 9 9 chr2 7677374 7677484 -243010370 + MIR3 SINE MIR 69 178 -30 1789 84 44 0 chr2 7678860 7679085 -243008769 + AluSq SINE Alu 1 235 -78 213 382 73 0 chr2 7679099 7679235 -243008619 + MIR3 SINE MIR 16 161 -47 237 343 114 14 chr2 7680093 7680233 -243007621 + L2 LINE L2 3118 3271 -1 193 222 206 0 chr2 7680275 7680338 -243007516 - L2 LINE L2 0 3272 3197 1027 206 40 0 chr2 7681033 7681261 -243006593 + MIR SINE MIR 25 261 -1 21 0 0 0 chr2 7681269 7681290 -243006564 + AT_rich Low_complexity Low_complexity 1 21 0 1622 197 49 42 chr2 7682921 7683307 -243004547 + MER63B DNA MER1_type 43 431 -5 221 342 28 0 chr2 7683848 7683994 -243003860 + MIR SINE MIR 15 146 -62 525 228 93 25 chr2 7684230 7684392 -243003462 + MER58B DNA MER1_type 169 341 0 191 287 42 77 chr2 7684785 7684917 -243002937 + MIR SINE MIR 36 169 -39 258 328 69 46 chr2 7684926 7685057 -243002797 - MER5A DNA MER1_type -22 167 34 435 19 0 0 chr2 7685210 7685262 -243002592 + (CA)n Simple_repeat Simple_repeat 2 53 0 219 238 0 49 chr2 7685966 7686043 -243001811 + CT-rich Low_complexity Low_complexity 1 116 0 185 288 188 29 chr2 7687035 7687205 -243000649 + MIR SINE MIR 34 230 -32 221 361 97 7 chr2 7687511 7687666 -243000188 - MIR3 SINE MIR -21 187 19 290 304 105 21 chr2 7687681 7687872 -242999982 + MIR SINE MIR 8 214 -48 222 284 231 12 chr2 7688721 7688890 -242998964 - MIR SINE MIR 0 262 57 1889 40 0 5 chr2 7689203 7689427 -242998427 - AluY SINE Alu -87 224 2 311 350 29 15 chr2 7689575 7689712 -242998142 - MER5A DNA MER1_type -48 141 3 354 23 0 0 chr2 7690089 7690132 -242997722 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2307 75 0 39 chr2 7690138 7690444 -242997410 - AluY SINE Alu -17 294 1 618 253 54 5 chr2 7691778 7691964 -242995890 + MIR SINE MIR 21 215 -47 242 324 15 0 chr2 7692376 7692444 -242995410 - L2 LINE L2 -219 3053 2985 2321 110 0 0 chr2 7693121 7693430 -242994424 + AluSc SINE Alu 1 309 0 368 271 65 0 chr2 7694029 7694136 -242993718 + MIR SINE MIR 119 232 -30 2189 110 0 43 chr2 7694171 7694498 -242993356 - AluSq SINE Alu 0 313 1 2383 92 7 0 chr2 7694909 7695212 -242992642 - AluSp SINE Alu -7 306 2 27 0 0 0 chr2 7695221 7695248 -242992606 + AT_rich Low_complexity Low_complexity 1 27 0 572 222 105 99 chr2 7696259 7696517 -242991337 + L1ME LINE L1 5504 5763 -407 481 168 19 0 chr2 7696592 7696699 -242991155 + (TA)n Simple_repeat Simple_repeat 1 109 0 2272 305 36 29 chr2 7696718 7697606 -242990248 + L1ME3A LINE L1 105 1224 -5635 897 239 81 10 chr2 7697864 7698161 -242989693 + L1ME3A LINE L1 1851 2168 -4791 * 1561 160 39 11 chr2 7698151 7698432 -242989422 + L1P LINE L1 3443 3731 -2415 3193 224 44 15 chr2 7698455 7699948 -242987906 + L1ME3A LINE L1 5425 6970 -11 1040 223 100 73 chr2 7701240 7701679 -242986175 - MLT2B1 LTR ERVL 0 520 70 927 108 31 0 chr2 7701681 7701810 -242986044 + AluSq/x SINE Alu 1 133 -179 383 183 14 0 chr2 7701819 7701890 -242985964 - MLT2B1 LTR ERVL -440 75 4 2268 111 0 0 chr2 7702437 7702734 -242985120 - AluSq SINE Alu -16 297 1 1299 206 104 41 chr2 7702823 7703188 -242984666 + MLT1B LTR MaLR 3 390 0 2288 109 0 10 chr2 7704045 7704357 -242983497 + AluSc SINE Alu 1 309 0 343 324 9 18 chr2 7704792 7704903 -242982951 - MIR SINE MIR -69 139 30 210 154 0 0 chr2 7705454 7705493 -242982361 + T-rich Low_complexity Low_complexity 3 41 0 2200 125 0 0 chr2 7706029 7706325 -242981529 - AluSx SINE Alu -16 296 1 504 224 33 26 chr2 7706347 7706499 -242981355 - MIR SINE MIR 0 262 110 283 23 23 0 chr2 7707231 7707275 -242980579 - L1MA3 LINE L1 0 6305 6261 1068 242 148 24 chr2 7707407 7707746 -242980108 + MLT1F LTR MaLR 133 513 -29 26 50 0 0 chr2 7707901 7707941 -242979913 + AT_rich Low_complexity Low_complexity 1 40 0 765 229 48 19 chr2 7707975 7708185 -242979669 + AluJo SINE Alu 5 220 -92 325 278 56 89 chr2 7708256 7708416 -242979438 + MER46C DNA MER2_type 7 156 -182 1934 104 4 0 chr2 7708416 7708665 -242979189 + AluSp SINE Alu 2 251 -62 325 278 56 89 chr2 7708665 7708774 -242979080 + MER46C DNA MER2_type 156 267 -71 1457 123 21 8 chr2 7708799 7709034 -242978820 + AluY SINE Alu 5 242 -69 402 316 0 0 chr2 7709262 7709433 -242978421 + A-rich Low_complexity Low_complexity 1 171 0 303 260 0 39 chr2 7709537 7709641 -242978213 - MIR SINE MIR -57 151 52 520 271 51 38 chr2 7709694 7709898 -242977956 + MIR SINE MIR 3 209 -53 2207 118 0 29 chr2 7710591 7710905 -242976949 + AluSx SINE Alu 1 305 -7 2157 112 3 13 chr2 7710918 7711222 -242976632 + AluSq SINE Alu 1 301 -12 1525 141 12 8 chr2 7711293 7711534 -242976320 + AluSq SINE Alu 1 242 -71 461 314 107 0 chr2 7711761 7711930 -242975924 + L1MC/D LINE L1 5525 5711 -2097 1005 209 29 9 chr2 7712014 7712224 -242975630 + AluJo SINE Alu 81 294 -18 1881 140 25 0 chr2 7712380 7712658 -242975196 + AluSx SINE Alu 1 285 -27 268 24 24 24 chr2 7712665 7712707 -242975147 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 254 289 7 94 chr2 7713006 7713155 -242974699 + MIR3 SINE MIR 59 194 -14 2354 98 0 0 chr2 7713431 7713727 -242974127 + AluY SINE Alu 1 296 -15 1176 187 52 38 chr2 7713828 7714095 -242973759 + AluJo SINE Alu 1 271 -41 268 284 0 11 chr2 7714454 7714542 -242973312 + CT-rich Low_complexity Low_complexity 3 89 0 1853 166 0 16 chr2 7714862 7715169 -242972685 - AluSx SINE Alu -6 306 5 1912 169 3 10 chr2 7715275 7715589 -242972265 - AluJb SINE Alu 0 312 1 185 284 20 59 chr2 7715609 7715711 -242972143 + L2 LINE L2 3139 3236 -36 372 43 0 0 chr2 7715713 7715759 -242972095 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 198 217 33 24 chr2 7715869 7715963 -242971891 + MIR SINE MIR 85 181 -27 741 225 69 32 chr2 7716231 7716333 -242971521 - L1MB5 LINE L1 0 6174 6077 1714 166 0 34 chr2 7716333 7716629 -242971225 - AluJo SINE Alu -26 286 1 741 225 69 32 chr2 7716629 7716744 -242971110 - L1MB5 LINE L1 -97 6077 5949 1970 141 0 26 chr2 7716963 7717268 -242970586 - AluSx SINE Alu -15 297 1 276 100 0 0 chr2 7717330 7717370 -242970484 + (TC)n Simple_repeat Simple_repeat 1 40 0 1705 103 0 9 chr2 7717659 7717891 -242969963 + MER30 DNA MER1_type 1 230 0 1797 147 29 4 chr2 7718217 7718496 -242969358 - AluJo SINE Alu -18 294 9 2402 104 0 0 chr2 7718581 7718890 -242968964 + AluSx SINE Alu 1 309 -3 1583 155 0 4 chr2 7718990 7719229 -242968625 + AluJb SINE Alu 59 296 -16 303 223 39 77 chr2 7720001 7720131 -242967723 - L1MC5 LINE L1 -836 7125 7001 2145 130 3 0 chr2 7720132 7720431 -242967423 + AluSx SINE Alu 1 300 -12 270 113 9 209 chr2 7720648 7720750 -242967104 - L1ME1 LINE L1 -2 6176 6089 475 105 17 244 chr2 7720760 7720836 -242967018 - L1MA5A LINE L1 0 6297 6280 1767 172 3 0 chr2 7720836 7721121 -242966733 - AluJo SINE Alu -26 286 1 475 105 17 244 chr2 7721121 7721216 -242966638 - L1MA5A LINE L1 -17 6280 6165 662 127 9 0 chr2 7721240 7721350 -242966504 - L1MA5A LINE L1 -116 6181 6071 472 189 35 154 chr2 7721351 7721503 -242966351 - L1ME1 LINE L1 -59 6107 5983 2184 120 0 10 chr2 7721503 7721803 -242966051 - AluSx SINE Alu -15 297 1 472 189 35 154 chr2 7721803 7721851 -242966003 - L1ME1 LINE L1 -183 5983 5931 1243 167 26 0 chr2 7721863 7722096 -242965758 - AluSx SINE Alu -16 296 58 301 360 34 6 chr2 7722944 7723119 -242964735 + MIR SINE MIR 16 195 -67 3070 70 19 2 chr2 7723128 7723542 -242964312 + L1PA10 LINE L1 5743 6163 -5 24 0 0 0 chr2 7723618 7723642 -242964212 + AT_rich Low_complexity Low_complexity 1 24 0 621 167 79 0 chr2 7724868 7724982 -242962872 - Charlie1 DNA MER1_type -1 2760 2638 201 342 95 37 chr2 7725241 7725431 -242962423 - MIR SINE MIR -39 223 23 305 278 103 0 chr2 7725701 7725798 -242962056 + L2 LINE L2 3158 3264 -8 202 150 25 0 chr2 7725809 7725849 -242962005 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 7725857 7725886 -242961968 + AT_rich Low_complexity Low_complexity 1 29 0 292 244 154 41 chr2 7726887 7727010 -242960844 - L2 LINE L2 -1 3312 3176 271 373 54 54 chr2 7727099 7727378 -242960476 - L2 LINE L2 -340 2974 2696 22 35 0 0 chr2 7728257 7728286 -242959568 + AT_rich Low_complexity Low_complexity 1 29 0 183 298 0 18 chr2 7728801 7728858 -242958996 - MIR SINE MIR -126 136 81 1267 265 84 62 chr2 7729052 7729190 -242958664 + MLT1H1 LTR MaLR 2 135 -420 736 209 62 0 chr2 7729190 7729367 -242958487 - MER53 DNA DNA -1 188 1 1267 265 84 62 chr2 7729367 7729714 -242958140 + MLT1H1 LTR MaLR 135 498 -57 1802 135 14 0 chr2 7729714 7729995 -242957859 + AluSc SINE Alu 1 285 -24 1079 116 7 0 chr2 7730033 7730180 -242957674 + THE1B LTR MaLR 1 148 -216 1816 150 3 3 chr2 7730641 7730935 -242956919 + AluJb SINE Alu 1 294 -18 2562 35 0 0 chr2 7731200 7731510 -242956344 + AluY SINE Alu 1 310 -1 261 0 0 0 chr2 7732599 7732628 -242955226 + (CA)n Simple_repeat Simple_repeat 1 29 0 270 0 0 0 chr2 7732704 7732734 -242955120 + (A)n Simple_repeat Simple_repeat 1 30 0 2760 115 24 21 chr2 7733877 7734302 -242953552 + MSTB LTR MaLR 1 426 0 222 313 15 0 chr2 7734932 7734999 -242952855 - MIR SINE MIR -63 145 78 252 325 150 35 chr2 7735531 7735731 -242952123 + MIR SINE MIR 34 256 -6 325 0 44 0 chr2 7736069 7736114 -242951740 + (CA)n Simple_repeat Simple_repeat 1 47 0 213 262 87 39 chr2 7736123 7736226 -242951628 + L3 LINE CR1 355 462 -1115 274 173 74 62 chr2 7736258 7736339 -242951515 - MIR SINE MIR -81 181 100 184 231 77 90 chr2 7736542 7736620 -242951234 - MIR SINE MIR -165 97 21 216 253 0 76 chr2 7738119 7738198 -242949656 - L2 LINE L2 0 3313 3241 1065 241 119 71 chr2 7739059 7739553 -242948301 + MLT1K LTR MaLR 70 587 -1 228 220 17 0 chr2 7740099 7740158 -242947696 + MER69 DNA AcHobo 22 81 -96 1065 259 69 13 chr2 7740609 7740984 -242946870 + MER69 DNA AcHobo 2094 2489 -37 1919 154 62 11 chr2 7742451 7742808 -242945046 - THE1C LTR MaLR 0 375 1 319 333 124 7 chr2 7743205 7743358 -242944496 - MIR SINE MIR -57 205 35 283 323 40 16 chr2 7743841 7743965 -242943889 + L3 LINE CR1 1385 1511 -66 1912 146 3 0 chr2 7744288 7744589 -242943265 + AluJb SINE Alu 1 302 -10 326 258 50 42 chr2 7745677 7745797 -242942057 - MIR SINE MIR -52 210 90 247 311 13 10 chr2 7745931 7746093 -242941761 - MIR SINE MIR -1 261 48 208 305 95 38 chr2 7746426 7746531 -242941323 + MER5B DNA MER1_type 54 164 -14 249 293 207 21 chr2 7746574 7746714 -242941140 + MER5A DNA MER1_type 4 169 -20 476 240 147 8 chr2 7747189 7747318 -242940536 + MIR SINE MIR 72 218 -44 180 0 0 0 chr2 7747364 7747384 -242940470 + (CA)n Simple_repeat Simple_repeat 1 20 0 297 198 58 12 chr2 7747451 7747537 -242940317 + L1ME4a LINE L1 6030 6119 -2 255 328 15 21 chr2 7747655 7747813 -242940041 + MIR SINE MIR 58 212 -50 230 154 26 0 chr2 7749099 7749138 -242938716 + MLT1I LTR MaLR 98 137 -272 569 273 97 6 chr2 7750975 7751151 -242936703 - MIR SINE MIR -55 207 16 673 296 71 4 chr2 7752786 7753012 -242934842 - MIR SINE MIR 0 262 22 223 198 49 111 chr2 7754296 7754377 -242933477 + MIR SINE MIR 111 186 -76 312 262 98 25 chr2 7754702 7754824 -242933030 + MER115 DNA AcHobo 100 230 -463 638 237 100 52 chr2 7754936 7755185 -242932669 + MER115 DNA AcHobo 426 686 -7 195 100 0 0 chr2 7755385 7755415 -242932439 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 354 230 97 26 chr2 7755415 7755528 -242932326 - L2 LINE L2 -13 3300 3180 23 0 0 0 chr2 7756139 7756162 -242931692 + AT_rich Low_complexity Low_complexity 1 23 0 1252 138 0 0 chr2 7756600 7756803 -242931051 + L1MA5 LINE L1 6097 6299 -1 700 236 44 58 chr2 7758413 7758638 -242929216 + MIR SINE MIR 31 252 -10 586 130 130 0 chr2 7759000 7759138 -242928716 + THE1B LTR MaLR 209 364 0 267 111 0 0 chr2 7759142 7759178 -242928676 + MLT1G LTR MaLR 555 590 0 1903 211 74 18 chr2 7759920 7760365 -242927489 + MLT1D LTR MaLR 36 505 0 504 324 89 12 chr2 7760377 7760624 -242927230 + L2 LINE L2 2671 2936 -378 270 307 64 21 chr2 7760624 7760819 -242927035 + MLT1J2 LTR MaLR 1 207 -239 205 293 49 37 chr2 7760889 7760971 -242926883 - L2 LINE L2 -620 2694 2612 860 245 28 36 chr2 7761009 7761262 -242926592 - MIR SINE MIR -10 252 2 2342 118 21 16 chr2 7761749 7762122 -242925732 - THE1C LTR MaLR 0 375 1 192 278 31 31 chr2 7762768 7762865 -242924989 + L2 LINE L2 2912 3008 -305 449 290 69 0 chr2 7762878 7763023 -242924831 - MIR SINE MIR -74 188 34 280 267 58 0 chr2 7763225 7763311 -242924543 - MER5A DNA MER1_type -77 112 22 509 206 109 23 chr2 7763365 7763540 -242924314 - LTR33 LTR ERVL -3 518 329 453 250 180 0 chr2 7765280 7765408 -242922446 - MIR SINE MIR -1 261 111 1926 125 21 14 chr2 7767040 7767329 -242920525 + AluSx SINE Alu 1 291 -21 306 170 0 0 chr2 7767337 7767384 -242920470 + MLT1G-int LTR MaLR 1684 1730 -5 1071 181 169 68 chr2 7767452 7767777 -242920077 - MLT1A1 LTR MaLR -7 358 1 2232 76 79 9 chr2 7768218 7768547 -242919307 + L1PB2 LINE L1 5799 6150 -1 506 284 43 38 chr2 7769428 7769544 -242918310 - L1ME4a LINE L1 -44 6077 5963 393 75 0 0 chr2 7769544 7769597 -242918257 + (CA)n Simple_repeat Simple_repeat 2 54 0 506 284 43 38 chr2 7769597 7769871 -242917983 - L1ME4a LINE L1 -158 5963 5685 240 35 0 0 chr2 7770834 7770863 -242916991 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 752 199 0 11 chr2 7770998 7771179 -242916675 + G-rich Low_complexity Low_complexity 2 180 0 201 195 0 0 chr2 7771177 7771218 -242916636 + GA-rich Low_complexity Low_complexity 1 41 0 * 310 207 14 83 chr2 7771328 7771473 -242916381 - MER103 DNA DNA 0 166 32 463 154 0 26 chr2 7771643 7771721 -242916133 + MER63 DNA MER1_type 42 743 -319 229 300 131 23 chr2 7772195 7772325 -242915529 - L2 LINE L2 -219 3053 2910 1478 211 42 20 chr2 7772920 7773275 -242914579 - MLT1A1 LTR MaLR -2 363 1 768 266 105 101 chr2 7774413 7774927 -242912927 + MLT1G LTR MaLR 18 581 -9 1437 194 24 78 chr2 7775440 7775852 -242912002 - MLT1B LTR MaLR 0 390 1 534 239 56 0 chr2 7775871 7776013 -242911841 + MLT1C LTR MaLR 317 466 -1 206 256 12 73 chr2 7776154 7776236 -242911618 + GA-rich Low_complexity Low_complexity 2 78 0 525 299 32 87 chr2 7776806 7777163 -242910691 - L2 LINE L2 -887 2427 2101 1517 252 24 37 chr2 7777163 7777674 -242910180 + MLT1D LTR MaLR 1 504 -1 525 299 32 87 chr2 7777674 7777785 -242910069 - L2 LINE L2 -1213 2101 1985 309 377 8 8 chr2 7777938 7778060 -242909794 + MIR3 SINE MIR 69 190 -18 488 125 0 12 chr2 7780257 7780337 -242907517 - L1MA5 LINE L1 -125 6175 6097 23 0 0 0 chr2 7780775 7780798 -242907056 + AT_rich Low_complexity Low_complexity 1 23 0 1580 112 20 24 chr2 7781425 7781676 -242906178 - MSTB LTR MaLR -176 250 1 875 254 94 94 chr2 7783111 7783151 -242904703 - MLT1H1 LTR MaLR 0 555 516 2546 100 19 6 chr2 7783151 7783510 -242904344 - THE1B LTR MaLR 0 364 1 875 254 94 94 chr2 7783510 7783548 -242904306 - MLT1H1 LTR MaLR -39 516 479 1804 135 14 0 chr2 7783548 7783829 -242904025 - AluSc SINE Alu -24 285 1 875 254 94 94 chr2 7783829 7784163 -242903691 - MLT1H1 LTR MaLR -75 480 142 1867 155 0 13 chr2 7784479 7784788 -242903066 + AluSx SINE Alu 1 305 -7 463 157 67 94 chr2 7785063 7785237 -242902617 - L1MA8 LINE L1 -3 6288 6120 2049 124 3 7 chr2 7785279 7785586 -242902268 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 7785625 7785648 -242902206 + AT_rich Low_complexity Low_complexity 1 23 0 877 183 89 10 chr2 7786083 7786389 -242901465 + L1MC/D LINE L1 5122 5446 -760 272 321 46 18 chr2 7786504 7786613 -242901241 + HAL1b LINE L1 800 911 -437 471 97 0 0 chr2 7787421 7787483 -242900371 - Alu SINE Alu -255 63 2 1865 129 41 7 chr2 7787589 7787884 -242899970 + AluSx SINE Alu 3 307 -5 1241 226 79 8 chr2 7788042 7788409 -242899445 - LTR37A LTR ERV1 0 426 34 7177 58 1 0 chr2 7788526 7789747 -242898107 + L1PA7 LINE L1 4957 6178 0 1946 114 3 10 chr2 7791814 7792103 -242895751 - AluSx SINE Alu -25 287 1 1434 191 3 3 chr2 7793394 7793697 -242894157 - AluSg SINE Alu -7 303 1 1122 314 46 24 chr2 7793701 7794242 -242893612 - L2 LINE L2 -541 2773 2221 267 318 61 21 chr2 7794280 7794436 -242893418 - MIR SINE MIR -62 146 9 429 122 0 0 chr2 7794616 7794690 -242893164 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 214 282 51 0 chr2 7795125 7795206 -242892648 - MIR SINE MIR -42 166 79 1012 127 10 35 chr2 7795218 7795643 -242892211 + (GGATG)n Simple_repeat Simple_repeat 1 591 0 231 146 0 0 chr2 7797060 7797101 -242890753 + (T)n Simple_repeat Simple_repeat 1 41 0 180 268 0 0 chr2 7797161 7797202 -242890652 + MIR3 SINE MIR 168 208 0 1822 153 10 3 chr2 7798202 7798510 -242889344 - AluSx SINE Alu -2 310 1 196 298 119 0 chr2 7798716 7798800 -242889054 + L2 LINE L2 3171 3264 -8 428 333 91 15 chr2 7799259 7799457 -242888397 + MIR SINE MIR 39 251 -11 210 320 87 10 chr2 7799983 7800086 -242887768 - L2 LINE L2 -4 3268 3158 332 329 73 81 chr2 7800199 7800543 -242887311 + L2 LINE L2 2932 3272 0 648 259 165 35 chr2 7800828 7800928 -242886926 + L1 LINE L1 3527 3613 -2533 1481 187 20 13 chr2 7800928 7801227 -242886627 - AluJb SINE Alu -11 301 1 648 259 165 35 chr2 7801227 7801496 -242886358 + L1 LINE L1 3613 3944 -2202 22 35 0 0 chr2 7801627 7801656 -242886198 + AT_rich Low_complexity Low_complexity 1 29 0 367 310 141 46 chr2 7801707 7801991 -242885863 + L1 LINE L1 4025 4335 -1811 1833 152 0 3 chr2 7802112 7802416 -242885438 + AluSx SINE Alu 1 303 0 23 0 0 0 chr2 7802619 7802642 -242885212 + AT_rich Low_complexity Low_complexity 1 23 0 276 296 87 36 chr2 7802866 7803062 -242884792 - L2 LINE L2 -212 3060 2855 262 232 0 0 chr2 7803142 7803198 -242884656 + MER4-int LTR ERV1 1107 1162 -5436 615 259 0 0 chr2 7803198 7803748 -242884106 + (TG)n Simple_repeat Simple_repeat 1 550 0 370 346 82 27 chr2 7803774 7804150 -242883704 - L2 LINE L2 -593 2721 2325 188 327 131 13 chr2 7804737 7804890 -242882964 - MIR SINE MIR -57 205 35 260 331 40 16 chr2 7805373 7805497 -242882357 + L3 LINE CR1 1385 1511 -66 1919 146 3 0 chr2 7805820 7806122 -242881732 + AluJb SINE Alu 1 303 -9 231 254 136 80 chr2 7807181 7807394 -242880460 - MIR SINE MIR -25 237 13 208 305 95 38 chr2 7807963 7808068 -242879786 + MER5B DNA MER1_type 54 164 -14 219 317 19 29 chr2 7808111 7808215 -242879639 + MER5A DNA MER1_type 4 106 -83 290 275 18 46 chr2 7809097 7809206 -242878648 + MIR SINE MIR 37 142 -66 324 350 0 0 chr2 7809454 7809557 -242878297 + CT-rich Low_complexity Low_complexity 4 106 0 1993 142 0 0 chr2 7809664 7809966 -242877888 + AluSx SINE Alu 1 302 -10 555 16 0 0 chr2 7809973 7810037 -242877817 + (GGAA)n Simple_repeat Simple_repeat 4 67 0 21 57 0 0 chr2 7811178 7811213 -242876641 + AT_rich Low_complexity Low_complexity 1 35 0 609 160 111 50 chr2 7811214 7811395 -242876459 + MER20 DNA MER1_type 1 192 -27 2067 125 0 0 chr2 7815402 7815699 -242872155 + AluSg SINE Alu 1 297 -13 404 236 6 0 chr2 7816216 7816394 -242871460 + CT-rich Low_complexity Low_complexity 2 180 0 542 307 53 5 chr2 7816809 7816998 -242870856 - MIR SINE MIR -1 261 64 1992 133 0 0 chr2 7817160 7817460 -242870394 + AluSx SINE Alu 1 300 -12 249 195 13 52 chr2 7819498 7819575 -242868279 - MLT1J LTR MaLR -11 604 429 535 288 112 15 chr2 7820422 7820627 -242867227 - MIR SINE MIR -10 252 28 309 150 17 0 chr2 7820974 7821034 -242866820 + MER96B DNA MER1_type? 50 110 -307 976 119 3 226 chr2 7821047 7821384 -242866470 - L1MA4 LINE L1 -9 6291 6030 493 72 0 12 chr2 7821415 7821498 -242866356 + MER96B DNA MER1_type? 97 178 -239 2193 153 75 0 chr2 7821596 7821994 -242865860 - MSTA LTR MaLR 0 428 1 329 295 0 0 chr2 7823376 7823471 -242864383 + (CA)n Simple_repeat Simple_repeat 2 96 0 223 247 0 90 chr2 7823577 7823755 -242864099 + (CCCCAA)n Simple_repeat Simple_repeat 6 167 0 242 304 78 35 chr2 7824933 7825048 -242862806 + L2 LINE L2 3186 3305 -8 408 238 57 78 chr2 7825331 7825454 -242862400 - L1ME4a LINE L1 0 6121 6002 1828 162 26 18 chr2 7825454 7825793 -242862061 - MER2 DNA MER2_type 0 344 3 408 238 57 78 chr2 7825793 7825862 -242861992 - L1ME4a LINE L1 -119 6002 5933 242 235 37 25 chr2 7825885 7825966 -242861888 + GA-rich Low_complexity Low_complexity 4 85 0 2332 71 0 0 chr2 7825991 7826285 -242861569 + AluY SINE Alu 2 295 -16 860 318 50 33 chr2 7826440 7827087 -242860767 - L1MC4a LINE L1 -489 5677 5254 480 289 114 48 chr2 7827435 7827847 -242860007 - L1MC4a LINE L1 -1374 4772 4334 193 324 59 0 chr2 7828800 7828868 -242858986 - MIR SINE MIR -6 256 185 426 208 77 54 chr2 7828900 7829030 -242858824 + Zaphod DNA AcHobo 24 156 -3875 1630 205 89 27 chr2 7829037 7829486 -242858368 + MLT1D LTR MaLR 1 477 -28 2118 244 92 34 chr2 7829516 7830300 -242857554 + Zaphod DNA AcHobo 161 989 -3042 765 184 40 17 chr2 7830301 7830475 -242857379 + Zaphod DNA AcHobo 3597 3774 -257 2057 116 7 10 chr2 7830782 7831092 -242856762 - AluSx SINE Alu -3 309 1 493 293 84 27 chr2 7831351 7831576 -242856278 + MIR SINE MIR 12 249 -13 256 245 174 52 chr2 7831652 7831807 -242856047 + MER5A DNA MER1_type 13 186 -3 513 269 40 23 chr2 7831814 7831989 -242855865 + MER5B DNA MER1_type 1 178 0 892 182 109 28 chr2 7832026 7832180 -242855674 + ORSL DNA AcHobo 9 192 -83 5560 48 6 0 chr2 7832180 7832853 -242855001 - L1PA7 LINE L1 -5 6149 5473 892 182 109 28 chr2 7832853 7832945 -242854909 + ORSL DNA AcHobo 192 275 0 198 217 0 36 chr2 7833047 7833130 -242854724 + GA-rich Low_complexity Low_complexity 3 82 0 27 0 0 0 chr2 7833601 7833628 -242854226 + AT_rich Low_complexity Low_complexity 1 27 0 291 268 0 0 chr2 7834509 7834580 -242853274 + GA-rich Low_complexity Low_complexity 3 73 0 1883 307 73 44 chr2 7835182 7835765 -242852089 + ERVL LTR ERVL 74 639 -4357 3276 133 82 0 chr2 7835765 7836252 -242851602 + MER1A DNA MER1_type 1 527 0 1883 307 73 44 chr2 7836252 7836774 -242851080 + ERVL LTR ERVL 639 1211 -3785 1094 304 92 27 chr2 7837121 7837941 -242849913 + ERVL LTR ERVL 1709 2631 -2691 348 305 106 69 chr2 7838128 7838436 -242849418 + ERVL LTR ERVL 4355 4687 -1077 1848 112 0 121 chr2 7838436 7838776 -242849078 + AluSx SINE Alu 1 299 -3 348 305 106 69 chr2 7838776 7838929 -242848925 + ERVL LTR ERVL 4687 4833 -931 294 286 84 59 chr2 7838967 7839240 -242848614 + ERVL LTR ERVL 4980 5259 -505 683 328 37 61 chr2 7839929 7840411 -242847443 + L1MEd LINE L1 811 1259 -1248 185 299 26 65 chr2 7841099 7841176 -242846678 - L2 LINE L2 -223 3049 2976 424 282 103 20 chr2 7841516 7841711 -242846143 + MIR SINE MIR 48 258 -4 1831 146 14 0 chr2 7843360 7843674 -242844180 - AluSx SINE Alu 0 312 1 340 301 9 9 chr2 7843982 7844095 -242843759 + MER94 DNA DNA 1 113 -21 185 62 0 31 chr2 7844535 7844567 -242843287 + (TA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 7844898 7844919 -242842935 + AT_rich Low_complexity Low_complexity 1 21 0 1662 165 7 14 chr2 7844919 7845216 -242842638 + AluJb SINE Alu 1 295 -17 249 315 87 47 chr2 7846775 7846902 -242840952 + L2 LINE L2 3141 3272 0 444 258 44 85 chr2 7848426 7848570 -242839284 + L1ME4a LINE L1 5530 5661 -460 2269 97 3 0 chr2 7848570 7848880 -242838974 + AluSp SINE Alu 1 311 -2 444 258 44 85 chr2 7848880 7848983 -242838871 + L1ME4a LINE L1 5661 5767 -354 4188 80 11 25 chr2 7849057 7849619 -242838235 - MER41A LTR ERV1 0 554 1 402 366 24 0 chr2 7849628 7849792 -242838062 + MIR SINE MIR 83 250 -12 339 232 89 0 chr2 7849980 7850092 -242837762 + L1ME4a LINE L1 5991 6112 -9 241 269 0 0 chr2 7850136 7850188 -242837666 - L3 LINE CR1 -7 1570 1519 335 277 32 11 chr2 7850336 7850430 -242837424 + L2 LINE L2 3173 3268 -4 3751 142 48 2 chr2 7850585 7851192 -242836662 + MER41B LTR ERV1 1 635 0 717 237 19 13 chr2 7852452 7852608 -242835246 - MER5B DNA MER1_type -21 157 1 350 311 68 0 chr2 7853042 7853145 -242834709 - L2 LINE L2 -46 3226 3117 2747 133 166 0 chr2 7853438 7853890 -242833964 - MER1A DNA MER1_type -1 528 2 316 296 86 49 chr2 7854490 7854652 -242833202 - MIR3 SINE MIR -11 197 30 711 276 70 0 chr2 7857307 7857506 -242830348 - MIR SINE MIR -36 226 14 402 21 0 0 chr2 7860153 7860200 -242827654 + (CATA)n Simple_repeat Simple_repeat 1 47 0 473 276 21 91 chr2 7860879 7861122 -242826732 + HAL1 LINE L1 1034 1259 -1248 570 277 70 18 chr2 7861151 7861436 -242826418 + HAL1 LINE L1 1374 1673 -834 566 192 54 15 chr2 7861465 7861595 -242826259 - MIR SINE MIR -20 242 108 2256 87 0 7 chr2 7862015 7862325 -242825529 + AluY SINE Alu 1 308 -3 22 88 0 0 chr2 7862405 7862462 -242825392 + AT_rich Low_complexity Low_complexity 1 57 0 303 248 111 26 chr2 7862489 7862606 -242825248 + HAL1b LINE L1 746 872 -476 1100 173 82 8 chr2 7862634 7862965 -242824889 + L1MC/D LINE L1 5097 5446 -760 272 321 46 18 chr2 7863080 7863189 -242824665 + HAL1b LINE L1 800 911 -437 922 214 66 26 chr2 7863876 7864180 -242823674 - MER33 DNA MER1_type 0 324 9 410 318 88 7 chr2 7864448 7864596 -242823258 + MIR SINE MIR 88 247 -15 2653 10 0 0 chr2 7866237 7866533 -242821321 - AluYb8 SINE Alu -2 316 21 319 333 111 0 chr2 7866695 7866830 -242821024 + L2 LINE L2 3121 3270 -2 2188 114 0 0 chr2 7868300 7868606 -242819248 - AluSx SINE Alu -6 306 1 440 300 36 0 chr2 7868608 7868748 -242819106 - MIR SINE MIR -70 192 48 200 274 219 14 chr2 7869645 7869791 -242818063 + MIR SINE MIR 87 262 0 198 290 87 0 chr2 7870000 7870069 -242817785 - MIR SINE MIR -136 126 52 323 320 66 39 chr2 7870869 7871050 -242816804 - MIR SINE MIR -57 205 20 433 188 10 30 chr2 7871803 7871904 -242815950 - MIR3 SINE MIR -7 201 103 212 320 30 40 chr2 7872592 7872692 -242815162 + MIR SINE MIR 45 143 -65 335 333 79 12 chr2 7873779 7873944 -242813910 + L1MB4 LINE L1 4637 4812 -1334 242 266 11 21 chr2 7874011 7874105 -242813749 + L1MB4 LINE L1 4918 5010 -1136 2459 218 3 59 chr2 7874319 7874581 -242813273 + L1MB4 LINE L1 5570 5845 -335 2373 57 0 63 chr2 7874581 7874913 -242812941 + AluY SINE Alu 1 311 0 2459 218 3 59 chr2 7874913 7875289 -242812565 + L1MB4 LINE L1 5845 6174 -6 1554 202 31 17 chr2 7875289 7875646 -242812208 + L1MB7 LINE L1 5814 6175 -9 920 291 137 18 chr2 7875664 7876283 -242811571 + L1ME3A LINE L1 5263 5955 -215 1281 124 30 0 chr2 7876491 7876692 -242811162 + L1PA10 LINE L1 5962 6168 0 2200 91 18 3 chr2 7877883 7878168 -242809686 - AluSx SINE Alu -14 298 10 298 154 0 0 chr2 7878753 7878805 -242809049 + MADE1 DNA Mariner 29 80 0 754 138 0 36 chr2 7878867 7879005 -242808849 - FLAM_C SINE Alu 0 133 1 528 122 0 0 chr2 7879446 7879528 -242808326 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 246 255 94 54 chr2 7881314 7881463 -242806391 - MLT1K LTR MaLR -13 575 421 217 260 77 96 chr2 7881646 7881750 -242806104 - MER5A DNA MER1_type -84 105 4 332 287 0 23 chr2 7881761 7881848 -242806006 - MIR SINE MIR -165 97 13 312 27 0 0 chr2 7883530 7883567 -242804287 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 296 283 137 47 chr2 7884909 7885121 -242802733 + MLT1L LTR MaLR 2 232 -383 35 0 0 0 chr2 7885832 7885867 -242801987 + AT_rich Low_complexity Low_complexity 1 35 0 682 324 29 11 chr2 7885882 7886154 -242801700 + MLT1L LTR MaLR 6 282 -333 400 177 76 0 chr2 7886293 7886372 -242801482 - MLT1J1 LTR MaLR -123 323 239 542 195 37 0 chr2 7886587 7886721 -242801133 - MLT1J1 LTR MaLR -277 173 25 * 547 229 30 8 chr2 7886718 7886849 -242801005 - MER45A DNA AcHobo -30 148 15 578 111 30 0 chr2 7887664 7887763 -242800091 + (ATGGTG)n Simple_repeat Simple_repeat 4 105 0 336 276 143 0 chr2 7888213 7888318 -242799536 - MIR SINE MIR -20 242 123 1787 125 86 44 chr2 7888535 7888895 -242798959 - THE1C LTR MaLR 0 375 1 315 325 24 24 chr2 7889096 7889265 -242798589 - L1ME4a LINE L1 -18 6103 5935 928 258 26 45 chr2 7889336 7889758 -242798096 - L1ME4a LINE L1 -161 5960 5547 2363 163 7 17 chr2 7891253 7891718 -242796136 - L1MB1 LINE L1 0 6168 5709 201 320 53 0 chr2 7891719 7891794 -242796060 - MIR SINE MIR -110 152 74 348 301 5 88 chr2 7892051 7892093 -242795761 - MER5B DNA MER1_type -1 177 133 2281 43 75 7 chr2 7892093 7892375 -242795479 - AluY SINE Alu -10 301 1 348 301 5 88 chr2 7892375 7892525 -242795329 - MER5B DNA MER1_type -45 133 1 338 271 47 0 chr2 7894315 7894422 -242793432 - MIR SINE MIR -48 214 103 507 211 141 14 chr2 7894662 7894804 -242793050 + MER3 DNA MER1_type 36 195 -14 411 246 42 0 chr2 7897123 7897241 -242790613 - MIR SINE MIR -62 146 24 2384 75 0 13 chr2 7897927 7898232 -242789622 - AluY SINE Alu -10 301 1 180 111 0 0 chr2 7899056 7899083 -242788771 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 979 238 125 35 chr2 7899360 7899785 -242788069 - MLT1C LTR MaLR -3 464 2 257 349 8 31 chr2 7902058 7902187 -242785667 - L3 LINE CR1 -63 1514 1389 229 280 32 32 chr2 7902259 7902352 -242785502 - MIR SINE MIR -74 188 96 216 318 59 35 chr2 7902438 7902608 -242785246 - L3 LINE CR1 -183 1394 1221 2729 131 20 4 chr2 7902732 7903189 -242784665 - L1PA16 LINE L1 0 6166 5703 299 274 228 23 chr2 7903844 7904059 -242783795 + MIR SINE MIR 1 259 -3 496 318 112 9 chr2 7904468 7904701 -242783153 + MIR SINE MIR 3 259 -3 185 91 0 30 chr2 7905520 7905553 -242782301 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 434 317 54 24 chr2 7906360 7906527 -242781327 - MIR SINE MIR -70 192 21 501 269 52 68 chr2 7906539 7906978 -242780876 + L1ME4a LINE L1 5520 5951 -170 381 246 36 14 chr2 7907131 7907269 -242780585 + L1ME4a LINE L1 5965 6105 -16 1433 130 5 0 chr2 7907281 7907488 -242780366 - AluSp SINE Alu -3 310 103 2120 142 52 37 chr2 7908835 7909379 -242778475 + MLT2A2 LTR ERVL 1 554 0 1521 166 18 3 chr2 7909750 7910033 -242777821 - MLT1B LTR MaLR -8 382 96 26 30 0 0 chr2 7910055 7910088 -242777766 + AT_rich Low_complexity Low_complexity 1 33 0 1980 42 98 0 chr2 7910159 7910424 -242777430 - L1PA5 LINE L1 -7 6147 5857 241 246 53 0 chr2 7910424 7910481 -242777373 - MLT1B LTR MaLR -330 60 1 211 347 0 11 chr2 7910712 7910807 -242777047 + MIR SINE MIR 71 164 -98 2389 167 5 14 chr2 7911162 7911594 -242776260 + MSTA LTR MaLR 1 428 0 219 286 0 32 chr2 7911992 7912055 -242775799 + MIR SINE MIR 196 256 -6 363 284 17 57 chr2 7913152 7913306 -242774548 - MIR SINE MIR -14 248 100 2225 143 59 7 chr2 7913306 7913713 -242774141 + MSTA LTR MaLR 1 428 0 363 284 17 57 chr2 7913713 7913734 -242774120 - MIR SINE MIR -162 100 80 465 168 184 0 chr2 7914912 7915037 -242772817 + LTR16C LTR ERVL 228 375 -116 1108 211 81 88 chr2 7915085 7915178 -242772676 + MLT1C LTR MaLR 16 108 -359 2400 85 48 20 chr2 7915178 7915532 -242772322 - THE1B LTR MaLR 0 364 1 1108 211 81 88 chr2 7915532 7915883 -242771971 + MLT1C LTR MaLR 108 457 -10 409 175 97 35 chr2 7915892 7916006 -242771848 + LTR16C LTR ERVL 371 491 0 233 306 28 0 chr2 7916602 7916674 -242771180 + MIR3 SINE MIR 112 185 -23 191 333 76 49 chr2 7916717 7916861 -242770993 + MIR SINE MIR 109 256 -6 1159 201 30 91 chr2 7917552 7917950 -242769904 - MLT1A2 LTR MaLR 0 374 1 191 286 107 27 chr2 7918129 7918241 -242769613 - MIR SINE MIR -33 229 109 2222 123 3 0 chr2 7918252 7918552 -242769302 + AluSx SINE Alu 1 301 -11 468 353 105 0 chr2 7919405 7919595 -242768259 + MIR SINE MIR 53 262 0 235 264 132 9 chr2 7920174 7920280 -242767574 - MIR SINE MIR -65 197 79 218 81 27 0 chr2 7921018 7921055 -242766799 + (TCC)n Simple_repeat Simple_repeat 1 38 0 255 303 84 21 chr2 7921382 7921524 -242766330 + MIR SINE MIR 77 227 -35 187 328 17 0 chr2 7921844 7921902 -242765952 + L2 LINE L2 3245 3303 -10 313 236 0 0 chr2 7921918 7921990 -242765864 - MIR SINE MIR -138 124 53 487 246 46 130 chr2 7922339 7922419 -242765435 - MIR SINE MIR -2 260 175 1978 130 7 3 chr2 7922419 7922704 -242765150 + AluSx SINE Alu 6 291 -21 225 0 0 0 chr2 7922704 7922729 -242765125 + (TA)n Simple_repeat Simple_repeat 2 26 0 487 246 46 130 chr2 7922729 7922931 -242764923 - MIR SINE MIR -85 177 1 475 290 12 25 chr2 7923772 7923934 -242763920 - MER63 DNA MER1_type -276 786 1 201 133 0 0 chr2 7924178 7924208 -242763646 + MIR SINE MIR 117 146 -62 304 123 18 18 chr2 7925190 7925247 -242762607 + LTR33A LTR ERVL 447 503 -20 284 260 39 13 chr2 7926741 7926818 -242761036 + LTR67 LTR ERVL 99 177 -380 664 284 46 15 chr2 7926945 7927206 -242760648 + MLT1L LTR MaLR 347 615 0 312 343 84 17 chr2 7927234 7927412 -242760442 - L1MC4a LINE L1 -1878 5930 5741 422 261 92 15 chr2 7928583 7928713 -242759141 - MIR3 SINE MIR -16 192 53 419 308 39 19 chr2 7928737 7928893 -242758961 - MIR SINE MIR -70 192 34 2504 198 98 100 chr2 7929088 7929142 -242758712 + L1MC3 LINE L1 6840 6893 -892 1684 154 0 27 chr2 7929142 7929448 -242758406 + AluJo SINE Alu 14 299 -13 2504 198 98 100 chr2 7929448 7929662 -242758192 + L1MC3 LINE L1 6893 7106 -679 282 200 0 17 chr2 7929662 7929722 -242758132 + MLT1C LTR MaLR 50 108 -459 2504 198 98 100 chr2 7929722 7930328 -242757526 + L1MC3 LINE L1 7106 7784 -1 411 314 59 12 chr2 7930365 7930534 -242757320 + MER5B DNA MER1_type 2 178 0 213 161 286 0 chr2 7931551 7931607 -242756247 - MIR SINE MIR -121 141 70 453 158 0 0 chr2 7931844 7931920 -242755934 + L1MB3 LINE L1 6101 6176 -7 380 123 14 0 chr2 7933653 7933726 -242754128 + (CA)n Simple_repeat Simple_repeat 1 74 0 192 270 139 74 chr2 7934676 7934891 -242752963 + L2 LINE L2 2437 2665 -649 431 228 18 78 chr2 7935254 7935421 -242752433 + MIR SINE MIR 96 252 -10 2238 113 0 0 chr2 7935615 7935916 -242751938 - AluSq SINE Alu -8 305 5 235 308 0 0 chr2 7936399 7936575 -242751279 + GA-rich Low_complexity Low_complexity 1 176 0 2899 206 113 10 chr2 7936591 7937305 -242750549 + Charlie1a DNA MER1_type 109 896 -559 289 179 0 36 chr2 7937787 7937871 -242749983 - L1MA7 LINE L1 -147 6144 6064 850 105 15 0 chr2 7937871 7937997 -242749857 + L1MA7 LINE L1 6157 6291 0 733 220 77 0 chr2 7938372 7938554 -242749300 + MLT1C LTR MaLR 270 465 -2 406 293 0 0 chr2 7938568 7938667 -242749187 - MIR SINE MIR -107 155 57 255 301 221 15 chr2 7938912 7939111 -242748743 + MIR SINE MIR 22 261 -1 180 380 60 0 chr2 7940896 7940996 -242746858 - MIR SINE MIR -59 203 98 299 309 131 36 chr2 7941130 7941382 -242746472 - L3b LINE CR1 -164 1419 1144 236 306 13 19 chr2 7943411 7943568 -242744286 + CT-rich Low_complexity Low_complexity 2 157 0 250 311 68 0 chr2 7945914 7946017 -242741837 - L2 LINE L2 -214 3058 2949 195 152 0 0 chr2 7946492 7946525 -242741329 - MIR SINE MIR -117 145 113 181 277 15 0 chr2 7947587 7947652 -242740202 + L2 LINE L2 2703 2768 -546 495 243 97 5 chr2 7947666 7947851 -242740003 - MIR SINE MIR -15 247 46 348 254 107 57 chr2 7949642 7949819 -242738035 - MIR SINE MIR -55 207 22 363 195 13 0 chr2 7950952 7951029 -242736825 + MIR SINE MIR 66 143 -119 548 208 104 69 chr2 7951582 7951755 -242736099 + MER63A DNA MER1_type 3 181 -29 456 221 82 76 chr2 7951893 7952051 -242735803 + MIR SINE MIR 17 175 -87 304 346 121 27 chr2 7952131 7953107 -242734747 + L2 LINE L2 1675 2742 -572 411 258 93 7 chr2 7953551 7953702 -242734152 - MER20B DNA MER1_type -604 179 16 338 273 99 16 chr2 7953710 7953831 -242734023 + L2 LINE L2 3142 3272 0 2071 158 92 8 chr2 7954778 7955171 -242732683 + MSTB LTR MaLR 1 426 0 916 278 14 0 chr2 7955365 7955588 -242732266 - MIR SINE MIR -25 237 12 860 273 96 35 chr2 7955603 7956095 -242731759 - MLT1F1 LTR MaLR 0 567 1 3689 217 30 30 chr2 7958044 7958274 -242729580 - Charlie1 DNA MER1_type 0 2761 2532 2246 101 0 3 chr2 7958274 7958582 -242729272 - AluSx SINE Alu -1 311 5 3689 217 30 30 chr2 7958582 7959296 -242728558 - Charlie1 DNA MER1_type -228 2533 1817 397 253 37 34 chr2 7959808 7959958 -242727896 + MIR3 SINE MIR 21 172 -36 2446 208 50 11 chr2 7960275 7960833 -242727021 + MLT1G LTR MaLR 11 590 0 574 321 102 56 chr2 7960849 7961838 -242726016 + L1ME2 LINE L1 4954 7750 -211 322 269 21 78 chr2 7962179 7962320 -242725534 + MER69A DNA AcHobo 28 160 -17 1770 271 39 58 chr2 7962992 7963711 -242724143 + L1M3c LINE L1 1 705 -5436 646 207 8 32 chr2 7963707 7963945 -242723909 + L1M3c LINE L1 1341 1661 -4550 * 464 177 0 0 chr2 7963946 7964025 -242723829 - Tigger5 DNA MER2_type 0 2323 2245 * 1212 211 4 22 chr2 7964019 7964251 -242723603 - Tigger5 DNA MER2_type -2095 228 1 1541 263 99 9 chr2 7964256 7964665 -242723189 + L1M4c LINE L1 1436 1807 -4575 1988 125 0 0 chr2 7964665 7964978 -242722876 - AluSg SINE Alu 0 313 1 1541 263 99 9 chr2 7964978 7965747 -242722107 + L1M4c LINE L1 1807 2760 -3622 1564 104 5 0 chr2 7965747 7965959 -242721895 - AluSq SINE Alu -19 294 82 1541 263 99 9 chr2 7965959 7966078 -242721776 + L1M4c LINE L1 2760 2867 -3515 1946 167 48 17 chr2 7966078 7966285 -242721569 + L1MA9 LINE L1 5105 5304 -1008 7833 21 0 0 chr2 7966285 7967205 -242720649 - L1PA4 LINE L1 -11 6144 5224 1946 167 48 17 chr2 7967205 7967789 -242720065 + L1MA9 LINE L1 5304 6136 -176 1946 139 52 12 chr2 7967789 7968134 -242719720 + L1MA9 LINE L1 5954 6312 0 1946 167 48 17 chr2 7968134 7968317 -242719537 + L1MA9 LINE L1 6136 6312 0 2268 84 0 7 chr2 7968416 7968714 -242719140 - AluY SINE Alu -15 296 1 594 264 6 12 chr2 7968739 7968902 -242718952 + L1MA10 LINE L1 6159 6320 -14 626 315 56 24 chr2 7970025 7970435 -242717419 + L1ME4a LINE L1 5699 6121 0 220 315 33 22 chr2 7972675 7972767 -242715087 - MIR SINE MIR -82 180 88 385 210 217 7 chr2 7972994 7973137 -242714717 - MER5A DNA MER1_type -10 179 7 224 346 13 0 chr2 7973358 7973436 -242714418 + L2 LINE L2 3227 3305 -8 1964 192 32 24 chr2 7973731 7974142 -242713712 + MLT2D LTR ERVL 1 414 0 210 233 0 0 chr2 7974493 7974553 -242713301 + GA-rich Low_complexity Low_complexity 2 61 0 307 70 0 0 chr2 7976708 7976751 -242711103 - AluSp/q SINE Alu -8 295 253 205 286 223 0 chr2 7977203 7977315 -242710539 + L2 LINE L2 3136 3272 0 289 250 0 0 chr2 7977512 7977572 -242710282 + L2 LINE L2 2999 3058 -214 194 207 17 0 chr2 7977699 7977757 -242710097 + (CA)n Simple_repeat Simple_repeat 1 59 0 184 319 28 14 chr2 7977961 7978033 -242709821 - MIR SINE MIR -169 93 21 556 281 22 43 chr2 7978246 7978431 -242709423 + MIR SINE MIR 23 203 -59 331 284 99 23 chr2 7978496 7978673 -242709181 - MIR SINE MIR -28 234 43 293 235 113 17 chr2 7979428 7979543 -242708311 - MIR3 SINE MIR -78 130 5 429 242 32 20 chr2 7981255 7981600 -242706254 + (CA)n Simple_repeat Simple_repeat 1 349 0 373 274 0 11 chr2 7981895 7981990 -242705864 + MIR SINE MIR 58 151 -57 380 325 29 10 chr2 7982384 7982590 -242705264 - L1MC4a LINE L1 -1929 5879 5670 269 324 58 29 chr2 7982923 7983096 -242704758 + MIR SINE MIR 33 210 -52 297 190 113 64 chr2 7983662 7983802 -242704052 + MIR SINE MIR 41 192 -68 387 274 46 4 chr2 7985263 7985422 -242702432 - MIR3 SINE MIR 0 262 51 424 239 8 51 chr2 7985433 7985550 -242702304 + L2 LINE L2 3201 3312 -1 293 315 46 39 chr2 7987198 7987328 -242700526 + MIR3 SINE MIR 78 208 0 202 307 0 45 chr2 7988464 7988552 -242699302 - L2 LINE L2 -10 3262 3179 486 289 13 33 chr2 7989851 7990003 -242697851 + MIR SINE MIR 28 176 -86 615 259 7 0 chr2 7990079 7990214 -242697640 + MIR SINE MIR 16 151 -111 427 209 51 82 chr2 7990215 7990373 -242697481 + L1MB4 LINE L1 6022 6174 -6 338 232 11 11 chr2 7990364 7990459 -242697395 + L1MB8 LINE L1 6078 6172 -6 * 373 256 0 60 chr2 7990473 7990606 -242697248 + MIR SINE MIR 137 261 -1 377 349 23 11 chr2 7990619 7990721 -242697133 - MIR SINE MIR -60 202 96 2268 47 34 24 chr2 7990721 7991018 -242696836 - AluY SINE Alu -11 300 1 377 349 23 11 chr2 7991018 7991090 -242696764 - MIR SINE MIR -166 96 26 235 280 178 0 chr2 7993137 7993244 -242694610 - MIR SINE MIR -91 171 46 340 319 60 0 chr2 7993635 7993751 -242694103 - MIR SINE MIR -111 151 29 2233 97 7 0 chr2 7994357 7994655 -242693199 + AluSc SINE Alu 1 300 -9 189 192 14 27 chr2 7994689 7994762 -242693092 + (TA)n Simple_repeat Simple_repeat 1 72 0 242 137 59 0 chr2 7994776 7994827 -242693027 + G-rich Low_complexity Low_complexity 3 56 0 769 97 0 82 chr2 7994828 7995024 -242692830 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 378 123 66 8 chr2 7995134 7995256 -242692598 + (TG)n Simple_repeat Simple_repeat 1 129 0 203 149 0 21 chr2 7995310 7995357 -242692497 + (TG)n Simple_repeat Simple_repeat 1 46 0 215 305 48 9 chr2 7995750 7995855 -242691999 + MIR SINE MIR 20 128 -134 2212 114 0 0 chr2 7996312 7996618 -242691236 + AluSx SINE Alu 1 306 -6 237 346 31 8 chr2 7998996 7999126 -242688728 + L1ME4a LINE L1 5518 5650 -2158 2581 122 32 30 chr2 7999127 7999562 -242688292 + L1PA10 LINE L1 5732 6167 -1 317 360 48 0 chr2 7999563 7999688 -242688166 + L1ME4a LINE L1 5726 5856 -265 393 250 92 0 chr2 7999928 8000124 -242687730 + L1ME4a LINE L1 5728 5941 -180 24 67 0 0 chr2 8000124 8000169 -242687685 + AT_rich Low_complexity Low_complexity 1 45 0 1887 188 37 39 chr2 8000238 8000843 -242687011 + L1MB7 LINE L1 5015 5674 -510 2477 191 23 29 chr2 8001294 8001381 -242686473 + L1MB7 LINE L1 5652 5738 -446 1967 133 3 7 chr2 8001381 8001690 -242686164 + AluSx SINE Alu 1 308 -4 2477 191 23 29 chr2 8001690 8002119 -242685735 + L1MB7 LINE L1 5738 6165 -19 6105 147 78 31 chr2 8002142 8002474 -242685380 + Tigger3b DNA MER2_type 1 316 -2712 2234 94 0 0 chr2 8002474 8002773 -242685081 - AluSx SINE Alu -13 299 1 6105 147 78 31 chr2 8002773 8003283 -242684571 + Tigger3b DNA MER2_type 316 917 -2111 236 30 30 0 chr2 8003283 8003316 -242684538 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 6105 147 78 31 chr2 8003316 8003646 -242684208 + Tigger3b DNA MER2_type 917 1230 -1 283 352 28 28 chr2 8004609 8004754 -242683100 - L3 LINE CR1 -198 1379 1235 290 301 60 15 chr2 8005246 8005379 -242682475 + MIR3 SINE MIR 58 196 -12 278 311 73 34 chr2 8006505 8006617 -242681237 - MIR SINE MIR -57 205 82 1157 254 88 31 chr2 8006617 8006971 -242680883 - MLT1A2 LTR MaLR 0 374 1 278 311 73 34 chr2 8006971 8007035 -242680819 - MIR SINE MIR -180 82 22 395 36 36 0 chr2 8007036 8007092 -242680762 + (CTACT)n Simple_repeat Simple_repeat 4 61 0 187 339 71 24 chr2 8008451 8008578 -242679276 - MIR SINE MIR -27 235 103 2610 113 6 6 chr2 8008587 8008951 -242678903 - THE1B LTR MaLR 0 364 1 250 307 39 31 chr2 8009786 8009913 -242677941 - MIR3 SINE MIR -16 192 65 1810 189 16 18 chr2 8009942 8010120 -242677734 + MLT1B LTR MaLR 1 178 -212 1627 192 0 26 chr2 8010120 8010432 -242677422 + AluJb SINE Alu 1 304 -8 1810 189 16 18 chr2 8010432 8010634 -242677220 + MLT1B LTR MaLR 178 380 -10 2172 109 0 7 chr2 8011048 8011350 -242676504 - AluSq SINE Alu -13 300 1 542 292 120 5 chr2 8011540 8011749 -242676105 + MIR SINE MIR 5 237 -25 559 266 67 37 chr2 8012339 8012665 -242675189 + MLT1J2 LTR MaLR 64 403 -6 184 219 205 26 chr2 8013003 8013154 -242674700 - L2 LINE L2 -1224 2090 1913 283 342 37 62 chr2 8015804 8015905 -242671949 + HAL1 LINE L1 8 110 -2397 779 228 59 30 chr2 8015905 8016107 -242671747 - MER3 DNA MER1_type -1 208 1 283 342 37 62 chr2 8016107 8016248 -242671606 + HAL1 LINE L1 110 244 -2263 299 312 23 69 chr2 8016251 8016424 -242671430 - MER115 DNA AcHobo -4 689 525 1205 216 24 80 chr2 8016426 8016838 -242671016 - MLT1B LTR MaLR 0 390 2 1055 251 129 34 chr2 8016840 8017219 -242670635 - MER115 DNA AcHobo -168 525 111 229 341 12 0 chr2 8017284 8017369 -242670485 + HAL1 LINE L1 235 320 -2187 1946 267 66 22 chr2 8017399 8017983 -242669871 + HAL1 LINE L1 418 974 -1533 252 0 0 0 chr2 8017983 8018011 -242669843 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1946 267 66 22 chr2 8018011 8018655 -242669199 + HAL1 LINE L1 974 1739 -768 447 35 0 0 chr2 8018741 8018798 -242669056 + (TG)n Simple_repeat Simple_repeat 2 58 0 287 167 0 0 chr2 8018812 8018854 -242669000 - MER41B-int LTR ERV1 -5904 42 1 962 105 13 7 chr2 8018854 8019007 -242668847 - MER41B LTR ERV1 0 635 482 1741 108 105 21 chr2 8019544 8019830 -242668024 + AluSx SINE Alu 3 312 0 208 369 35 35 chr2 8020062 8020203 -242667651 - MIR3 SINE MIR -16 192 52 289 250 117 17 chr2 8020331 8020451 -242667403 + L2 LINE L2 1303 1434 -1880 321 47 0 0 chr2 8020657 8020700 -242667154 + (CA)n Simple_repeat Simple_repeat 2 44 0 324 261 82 89 chr2 8021206 8021486 -242666368 + L2 LINE L2 2839 3116 -156 337 282 85 82 chr2 8023154 8023448 -242664406 - L2 LINE L2 -108 3205 2911 274 209 14 0 chr2 8024538 8024677 -242663177 + (TG)n Simple_repeat Simple_repeat 1 141 0 319 165 0 21 chr2 8024744 8024841 -242663013 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr2 8024842 8024873 -242662981 + (GGGAGA)n Simple_repeat Simple_repeat 3 33 0 914 160 0 41 chr2 8026733 8026902 -242660952 + AluJb SINE Alu 135 296 -16 448 292 39 28 chr2 8027433 8027588 -242660266 + MIR SINE MIR 15 171 -57 1107 160 62 29 chr2 8029807 8030153 -242657701 - MLT1D LTR MaLR -103 402 1 274 261 23 11 chr2 8031256 8031344 -242656510 + MIR SINE MIR 58 146 -116 1301 218 92 23 chr2 8032561 8032997 -242654857 - MLT1C LTR MaLR 0 467 2 1947 160 7 0 chr2 8033240 8033533 -242654321 - AluJo SINE Alu -17 295 1 26 64 0 0 chr2 8033593 8033640 -242654214 + AT_rich Low_complexity Low_complexity 1 47 0 359 302 39 23 chr2 8033758 8033972 -242653882 + MIR SINE MIR 5 228 -34 226 165 92 0 chr2 8035472 8035581 -242652273 + (TA)n Simple_repeat Simple_repeat 2 120 0 436 213 24 6 chr2 8035584 8035753 -242652101 + GA-rich Low_complexity Low_complexity 1 172 0 1232 155 24 0 chr2 8038624 8038837 -242649017 + MER20 DNA MER1_type 1 218 -1 509 138 0 0 chr2 8041680 8041760 -242646094 - MLT2B1 LTR ERVL -440 80 1 324 247 21 21 chr2 8042018 8042111 -242645743 + MER115 DNA AcHobo 7 99 -594 1807 184 49 16 chr2 8042130 8042499 -242645355 + MLT1B LTR MaLR 2 382 -8 552 278 108 0 chr2 8042522 8042734 -242645120 + MER115 DNA AcHobo 132 366 -327 22 0 0 0 chr2 8043355 8043377 -242644477 + GC_rich Low_complexity Low_complexity 1 22 0 948 217 27 5 chr2 8043791 8044012 -242643842 + MER52C-int LTR ERV1 2501 2726 -2491 675 201 28 14 chr2 8044058 8044202 -242643652 + MER52C-int LTR ERV1 4545 4690 -1256 293 119 0 0 chr2 8044207 8044249 -242643605 + MER52C-int LTR ERV1 5976 6017 -1188 453 107 57 4 chr2 8044253 8044391 -242643463 + MER52C-int LTR ERV1 6892 7091 0 3560 187 171 19 chr2 8044934 8045865 -242641989 + MER52C LTR ERV1 49 1278 0 233 260 110 0 chr2 8046315 8046415 -242641439 + MLT1H1 LTR MaLR 30 140 -415 282 191 51 6 chr2 8046994 8047151 -242640703 + (TA)n Simple_repeat Simple_repeat 2 165 0 321 287 25 57 chr2 8047182 8047304 -242640550 + L1MC4 LINE L1 6586 6703 -1339 318 261 23 23 chr2 8047306 8047394 -242640460 + L1MCa LINE L1 1980 2067 -4359 186 200 42 21 chr2 8047394 8047489 -242640365 + (TA)n Simple_repeat Simple_repeat 1 97 0 327 318 24 0 chr2 8047494 8047579 -242640275 - L1MC4 LINE L1 -1340 6702 6616 306 315 0 22 chr2 8047612 8047704 -242640150 + L1MC4 LINE L1 6614 6703 -1339 220 221 16 49 chr2 8047704 8047826 -242640028 + (TATATG)n Simple_repeat Simple_repeat 6 123 0 304 253 69 35 chr2 8047826 8047913 -242639941 - L1MC4 LINE L1 -1339 6703 6614 240 209 60 0 chr2 8047914 8047981 -242639873 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 216 0 0 0 chr2 8047981 8048005 -242639849 + (CA)n Simple_repeat Simple_repeat 1 24 0 646 163 42 95 chr2 8049075 8049219 -242638635 + MER96B DNA MER1_type? 1 134 -283 2773 115 29 2 chr2 8049219 8049663 -242638191 + L1PA16 LINE L1 5708 6163 -3 646 163 42 95 chr2 8049663 8049708 -242638146 + MER96B DNA MER1_type? 134 180 -237 1647 163 54 76 chr2 8049816 8050028 -242637826 - MSTB1 LTR MaLR 0 432 232 1970 157 3 0 chr2 8050028 8050328 -242637526 + AluJb SINE Alu 2 302 -10 1647 163 54 76 chr2 8050328 8050525 -242637329 - MSTB1 LTR MaLR -200 232 32 198 306 0 47 chr2 8052180 8052265 -242635589 + MIR SINE MIR 148 228 -34 1796 176 14 3 chr2 8052360 8052650 -242635204 + AluJo SINE Alu 1 293 -19 188 258 113 41 chr2 8052969 8053066 -242634788 - L3 LINE CR1 -106 1471 1368 1781 145 7 56 chr2 8054424 8054727 -242633127 + AluJo SINE Alu 1 288 -24 236 221 81 23 chr2 8054868 8054954 -242632900 - L2 LINE L2 0 3313 3223 207 69 0 0 chr2 8055003 8055032 -242632822 + (CCCCCA)n Simple_repeat Simple_repeat 4 32 0 629 197 55 0 chr2 8056339 8056466 -242631388 + FRAM SINE Alu 21 154 -22 183 350 57 0 chr2 8057578 8057701 -242630153 - MER5A DNA MER1_type -35 154 25 208 321 97 42 chr2 8057891 8058128 -242629726 - L2 LINE L2 -195 3077 2828 2426 82 0 0 chr2 8058457 8058749 -242629105 - AluSg SINE Alu -18 292 1 982 144 0 0 chr2 8059969 8060115 -242627739 - AluSg/x SINE Alu -8 302 157 225 296 12 25 chr2 8061060 8061141 -242626713 - MER5A DNA MER1_type 0 189 110 2014 117 23 47 chr2 8061142 8061526 -242626328 - THE1C LTR MaLR 0 375 1 190 291 46 106 chr2 8061557 8061708 -242626146 - MER5A DNA MER1_type -1 188 47 922 161 0 13 chr2 8062261 8062416 -242625438 + FRAM SINE Alu 24 176 0 2406 69 0 23 chr2 8062728 8063033 -242624821 + AluY SINE Alu 1 298 -13 1508 115 28 45 chr2 8063312 8063555 -242624299 + L1MB3 LINE L1 5892 6138 -45 1800 101 97 4 chr2 8063555 8063813 -242624041 + AluSg SINE Alu 1 282 -28 279 0 0 0 chr2 8063813 8063844 -242624010 + (CA)n Simple_repeat Simple_repeat 2 32 0 1508 115 28 45 chr2 8063844 8063887 -242623967 + L1MB3 LINE L1 6136 6174 -9 471 286 101 45 chr2 8064666 8065137 -242622717 - L1ME3A LINE L1 -217 5953 5450 1059 306 66 21 chr2 8065233 8065700 -242622154 + L2 LINE L2 2826 3313 0 1050 167 5 5 chr2 8065703 8066368 -242621486 + (TGGA)n Simple_repeat Simple_repeat 1 665 0 514 193 17 25 chr2 8067091 8067210 -242620644 + MLT1J1 LTR MaLR 3 120 -326 819 148 11 82 chr2 8067211 8067394 -242620460 + MER20 DNA MER1_type 1 170 -49 559 295 122 24 chr2 8067510 8067805 -242620049 + MLT1J2 LTR MaLR 113 436 -14 259 180 110 70 chr2 8068303 8068403 -242619451 - MER53 DNA DNA -84 105 2 329 273 123 27 chr2 8068405 8068592 -242619262 - MIR SINE MIR -13 249 45 277 376 23 23 chr2 8068932 8069105 -242618749 + MIR SINE MIR 18 190 -72 2005 145 16 10 chr2 8070008 8070139 -242617715 + AluJb SINE Alu 1 130 -182 1909 158 14 3 chr2 8070139 8070431 -242617423 + AluJb SINE Alu 1 295 -17 2005 145 16 10 chr2 8070431 8070602 -242617252 + AluJb SINE Alu 130 305 -7 332 248 101 48 chr2 8070889 8071083 -242616771 - MLT1G LTR MaLR -175 420 216 4144 189 81 69 chr2 8071085 8072631 -242615223 + L1MDa LINE L1 324 2126 -4414 1562 125 21 127 chr2 8072663 8073040 -242614814 + MER1B DNA MER1_type 1 337 0 441 249 71 24 chr2 8073157 8073326 -242614528 + MER5A DNA MER1_type 7 183 -6 232 309 0 64 chr2 8076397 8076507 -242611347 + C-rich Low_complexity Low_complexity 3 105 0 267 31 0 0 chr2 8076761 8076793 -242611061 + (CCG)n Simple_repeat Simple_repeat 2 33 0 399 297 0 14 chr2 8079428 8079573 -242608281 + C-rich Low_complexity Low_complexity 2 144 0 225 0 0 0 chr2 8080525 8080550 -242607304 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr2 8081881 8081904 -242605950 + AT_rich Low_complexity Low_complexity 1 23 0 529 243 101 106 chr2 8084118 8084622 -242603232 - L1 LINE L1 -1995 4151 3639 1897 121 29 0 chr2 8085093 8085373 -242602481 + AluJb SINE Alu 1 288 -24 26 30 0 0 chr2 8085374 8085407 -242602447 + AT_rich Low_complexity Low_complexity 1 33 0 1620 308 67 40 chr2 8085492 8086471 -242601383 + L1MEd LINE L1 112 1117 -5002 1747 134 10 23 chr2 8086605 8086904 -242600950 - AluJb SINE Alu -17 295 1 1965 277 71 13 chr2 8086916 8087664 -242600190 + L1MC4a LINE L1 5279 6069 -1739 1641 143 3 28 chr2 8087804 8088090 -242599764 + AluSx SINE Alu 1 279 -33 322 281 45 0 chr2 8088105 8088194 -242599660 - L1MC5 LINE L1 -861 7100 7008 961 290 86 28 chr2 8088292 8088836 -242599018 + L1MC4a LINE L1 6199 6774 -1034 333 259 46 15 chr2 8088864 8088995 -242598859 + L1MC5 LINE L1 6957 7091 -870 302 319 91 55 chr2 8089228 8089535 -242598319 + L1MC5 LINE L1 7249 7566 -395 243 0 0 0 chr2 8089549 8089576 -242598278 + (T)n Simple_repeat Simple_repeat 1 27 0 269 224 10 71 chr2 8089655 8089753 -242598101 + L1MC5 LINE L1 7711 7802 -159 359 309 95 8 chr2 8090907 8091033 -242596821 - L2 LINE L2 0 3272 3136 397 237 200 4 chr2 8091413 8091658 -242596196 + LTR50 LTR ERVL 502 794 -1 405 300 0 0 chr2 8091799 8091959 -242595895 + G-rich Low_complexity Low_complexity 1 160 0 315 142 122 0 chr2 8092060 8092208 -242595646 + (GGATG)n Simple_repeat Simple_repeat 2 167 0 311 164 41 0 chr2 8092211 8092284 -242595570 + GA-rich Low_complexity Low_complexity 1 76 0 1903 138 0 0 chr2 8092762 8093079 -242594775 + AluSx SINE Alu 1 317 0 694 301 109 12 chr2 8093402 8093731 -242594123 - L1MC/D LINE L1 -2073 5735 5375 222 62 0 0 chr2 8093745 8093777 -242594077 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 273 237 30 69 chr2 8094226 8094357 -242593497 - L1MC4a LINE L1 -1634 6174 6049 768 197 72 0 chr2 8094407 8094559 -242593295 + AluJb SINE Alu 136 298 -14 210 304 124 19 chr2 8094711 8094872 -242592982 + L3 LINE CR1 1320 1497 -80 1506 108 0 0 chr2 8095516 8095719 -242592135 + AluSx SINE Alu 1 203 -109 1087 172 10 25 chr2 8095720 8095924 -242591930 + MLT1B LTR MaLR 189 389 -1 237 65 0 0 chr2 8096087 8096118 -242591736 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 56 0 0 chr2 8096975 8097011 -242590843 + AT_rich Low_complexity Low_complexity 1 36 0 328 104 30 0 chr2 8098950 8099017 -242588837 + (TG)n Simple_repeat Simple_repeat 1 69 0 328 128 46 18 chr2 8099064 8099173 -242588681 + (TG)n Simple_repeat Simple_repeat 1 112 0 436 122 68 7 chr2 8099200 8099347 -242588507 + (TG)n Simple_repeat Simple_repeat 1 156 0 336 278 61 26 chr2 8099547 8099662 -242588192 - L2 LINE L2 -474 2840 2722 534 113 0 0 chr2 8099869 8099949 -242587905 + MADE1 DNA Mariner 1 80 0 1881 113 72 0 chr2 8100359 8100650 -242587204 - AluSx SINE Alu 0 312 1 2269 97 3 0 chr2 8100930 8101238 -242586616 + AluSp SINE Alu 1 309 -4 1651 148 56 14 chr2 8101306 8101590 -242586264 + AluJo SINE Alu 1 296 -16 1587 223 122 26 chr2 8102248 8102709 -242585145 + MLT1D LTR MaLR 1 505 0 1584 195 127 3 chr2 8103131 8103286 -242584568 - MSTD LTR MaLR -2 394 260 2204 113 159 5 chr2 8103286 8103657 -242584197 + MSTA LTR MaLR 1 428 0 1584 195 127 3 chr2 8103657 8103839 -242584015 - MSTD LTR MaLR -136 260 15 358 283 30 0 chr2 8103886 8103985 -242583869 + L2 LINE L2 3212 3313 0 274 316 29 76 chr2 8103985 8104156 -242583698 + L3 LINE CR1 1404 1566 -11 450 0 0 0 chr2 8104591 8104641 -242583213 + (TG)n Simple_repeat Simple_repeat 2 51 0 572 129 0 86 chr2 8104655 8104771 -242583083 - AluJ SINE Alu 0 312 207 927 136 0 7 chr2 8104771 8104911 -242582943 - AluJ SINE Alu -169 143 5 436 174 250 45 chr2 8104920 8105052 -242582802 - MLT1F LTR MaLR -383 159 1 216 176 44 0 chr2 8105671 8105739 -242582115 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 2173 53 0 0 chr2 8105832 8106097 -242581757 - AluY SINE Alu -16 295 31 395 271 68 23 chr2 8107540 8107671 -242580183 + MLT1G3 LTR MaLR 26 162 -433 1678 148 5 77 chr2 8107671 8108043 -242579811 - MER4A LTR ERV1 0 664 261 640 128 20 10 chr2 8108040 8108142 -242579712 - MER4A LTR ERV1 -561 103 1 * 561 266 80 73 chr2 8108154 8108572 -242579282 + MLT1G3 LTR MaLR 92 560 -7 1987 204 99 159 chr2 8108620 8108697 -242579157 - Charlie2a DNA MER1_type -6 2856 2776 5096 84 0 15 chr2 8108697 8109367 -242578487 - PABL_A LTR ERV1 0 660 1 1987 204 99 159 chr2 8109367 8110569 -242577285 - Charlie2a DNA MER1_type -86 2776 1673 1939 122 6 34 chr2 8110569 8110889 -242576965 + AluSx SINE Alu 1 311 -1 1987 204 99 159 chr2 8110889 8111066 -242576788 - Charlie2a DNA MER1_type -1189 1673 1487 460 282 222 0 chr2 8111189 8111405 -242576449 - Charlie2a DNA MER1_type -2239 623 360 896 301 132 36 chr2 8111826 8112654 -242575200 - HAL1 LINE L1 0 2507 1601 2549 171 11 18 chr2 8112673 8113128 -242574726 + LOR1b LTR ERV1 10 461 0 2126 265 85 75 chr2 8113129 8113248 -242574606 - HAL1 LINE L1 -913 1594 1478 2007 123 0 3 chr2 8113248 8113563 -242574291 - AluSx SINE Alu 0 314 1 2126 265 85 75 chr2 8113563 8114932 -242572922 - HAL1 LINE L1 -1029 1478 90 415 256 76 33 chr2 8117713 8117924 -242569930 + L1ME3A LINE L1 5727 5946 -224 2316 65 3 0 chr2 8117939 8118230 -242569624 + AluSg SINE Alu 5 296 -14 2374 116 42 11 chr2 8118289 8118642 -242569212 + THE1B LTR MaLR 1 364 0 2019 105 0 36 chr2 8118698 8119002 -242568852 - AluSx SINE Alu -19 293 1 1498 244 31 0 chr2 8119089 8119449 -242568405 - ERVL LTR ERVL -4525 1239 869 1374 241 26 42 chr2 8119545 8119969 -242567885 - MLT2B1 LTR ERVL -103 417 1 1658 156 42 10 chr2 8120054 8120343 -242567511 + AluJo SINE Alu 1 298 -14 23 54 0 0 chr2 8120742 8120779 -242567075 + AT_rich Low_complexity Low_complexity 1 37 0 2637 101 11 16 chr2 8121008 8121385 -242566469 + THE1C LTR MaLR 1 375 0 993 226 68 87 chr2 8121874 8122289 -242565565 - L1M4 LINE L1 -1022 5124 4718 36 40 0 0 chr2 8122390 8122440 -242565414 + AT_rich Low_complexity Low_complexity 1 50 0 295 250 24 12 chr2 8122541 8122625 -242565229 + L2 LINE L2 1471 1555 -1759 2671 170 19 46 chr2 8122703 8123187 -242564667 + MLT2B2 LTR ERVL 1 472 -43 201 74 0 0 chr2 8123187 8123214 -242564640 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2671 170 19 46 chr2 8123214 8123246 -242564608 + MLT2B2 LTR ERVL 472 503 -12 21 57 0 0 chr2 8123337 8123372 -242564482 + AT_rich Low_complexity Low_complexity 1 35 0 1632 168 0 14 chr2 8123378 8123669 -242564185 - AluJo SINE Alu -15 297 11 1109 123 12 0 chr2 8124432 8124602 -242563252 + AluSg/x SINE Alu 135 306 -4 193 329 13 26 chr2 8124773 8124849 -242563005 + MIR3 SINE MIR 125 199 -9 351 44 0 0 chr2 8125307 8125352 -242562502 + (CA)n Simple_repeat Simple_repeat 2 46 0 277 343 73 32 chr2 8125721 8125908 -242561946 + MIR SINE MIR 14 206 -56 * 567 291 35 0 chr2 8125907 8126048 -242561806 + MIR SINE MIR 97 242 -20 24 53 0 0 chr2 8126247 8126285 -242561569 + AT_rich Low_complexity Low_complexity 1 38 0 225 65 0 0 chr2 8126698 8126729 -242561125 + (ATG)n Simple_repeat Simple_repeat 2 32 0 857 226 106 10 chr2 8126822 8127030 -242560824 + MIR SINE MIR 17 244 -18 308 252 92 25 chr2 8127273 8127392 -242560462 - MER104 DNA Tc2 -49 131 5 22 0 0 0 chr2 8127722 8127744 -242560110 + AT_rich Low_complexity Low_complexity 1 22 0 521 176 0 11 chr2 8127866 8127957 -242559897 + FRAM SINE Alu 38 127 -49 403 195 172 94 chr2 8128218 8128474 -242559380 + MLT1J2 LTR MaLR 2 277 -173 293 248 77 3 chr2 8128522 8128621 -242559233 + MLT1J2 LTR MaLR 345 444 -2 876 131 0 8 chr2 8129068 8129198 -242558656 - FLAM_A SINE Alu -4 129 1 1994 119 3 0 chr2 8129377 8129662 -242558192 - AluSx SINE Alu -24 288 3 1773 161 0 17 chr2 8129750 8130048 -242557806 - AluJb SINE Alu -19 293 1 1627 192 77 0 chr2 8131648 8131971 -242555883 - MER7A DNA MER2_type 0 346 1 1645 132 73 11 chr2 8133177 8133481 -242554373 + AluJo SINE Alu 1 312 0 21 0 0 0 chr2 8137111 8137132 -242550722 + AT_rich Low_complexity Low_complexity 1 21 0 800 197 8 0 chr2 8137380 8137512 -242550342 - FLAM_A SINE Alu 0 133 1 246 255 88 74 chr2 8138241 8138457 -242549397 + L2 LINE L2 3030 3248 -65 1134 192 148 36 chr2 8139132 8139491 -242548363 - MER31B LTR ERV1 -43 423 25 24 32 0 0 chr2 8139631 8139662 -242548192 + AT_rich Low_complexity Low_complexity 1 31 0 2177 121 0 3 chr2 8140366 8140673 -242547181 + AluSx SINE Alu 1 306 -6 483 145 38 0 chr2 8143010 8143106 -242544748 - L1MB8 LINE L1 -275 5899 5798 3564 206 75 11 chr2 8143211 8144065 -242543789 + L1MC4a LINE L1 6900 7808 0 1946 128 6 55 chr2 8146402 8146730 -242541124 + AluSx SINE Alu 1 312 0 1064 181 108 23 chr2 8147245 8147505 -242540349 - AluJo SINE Alu -20 292 11 310 239 163 0 chr2 8147845 8147937 -242539917 + L2 LINE L2 3203 3309 -4 238 247 161 0 chr2 8148571 8148664 -242539190 - MIR SINE MIR -76 186 79 217 195 35 23 chr2 8149170 8149257 -242538597 + (TTATA)n Simple_repeat Simple_repeat 5 92 0 1071 269 143 18 chr2 8150018 8150416 -242537438 - L2 LINE L2 -18 3295 2848 3373 135 67 24 chr2 8150759 8151344 -242536510 + MER4B LTR ERV1 1 610 0 459 33 33 0 chr2 8152354 8152414 -242535440 + AluY SINE Alu 2 63 -247 24 32 0 0 chr2 8152515 8152546 -242535308 + AT_rich Low_complexity Low_complexity 1 31 0 264 319 61 25 chr2 8153758 8153921 -242533933 + L2 LINE L2 2905 3073 -240 1778 286 161 21 chr2 8154235 8155263 -242532591 + L2 LINE L2 191 1362 -1952 278 271 84 60 chr2 8156302 8156553 -242531301 - L2 LINE L2 -920 2394 2138 254 309 40 46 chr2 8156553 8156705 -242531149 + L2 LINE L2 3132 3282 -31 182 233 209 23 chr2 8156736 8156865 -242530989 - L2 LINE L2 -1232 2082 1930 220 186 0 93 chr2 8156995 8157092 -242530762 + GA-rich Low_complexity Low_complexity 5 92 0 2288 92 17 0 chr2 8158466 8158758 -242529096 + AluSx SINE Alu 1 297 -15 316 180 0 0 chr2 8159282 8159343 -242528511 - L1ME4a LINE L1 -1 6120 6060 21 0 0 0 chr2 8159394 8159415 -242528439 + AT_rich Low_complexity Low_complexity 1 21 0 2101 141 0 0 chr2 8159415 8159721 -242528133 + AluSx SINE Alu 1 306 -6 1100 169 0 0 chr2 8160252 8160435 -242527419 - AluJb SINE Alu -10 302 120 410 289 86 119 chr2 8160746 8161720 -242526134 + L2 LINE L2 880 1821 -1493 2098 104 0 0 chr2 8161753 8162058 -242525796 + AluSx SINE Alu 5 309 0 209 262 12 83 chr2 8162082 8162166 -242525688 + L2 LINE L2 1938 2015 -1299 892 226 34 26 chr2 8162176 8162410 -242525444 + MER106A DNA MER1_type 1 236 0 490 265 149 16 chr2 8162412 8162733 -242525121 - L1MC5 LINE L1 -99 7862 7499 1671 121 148 4 chr2 8163051 8163307 -242524547 - AluJb SINE Alu -5 297 5 495 353 154 12 chr2 8163386 8163990 -242523864 + L2 LINE L2 2167 2856 -458 344 348 167 30 chr2 8164019 8164324 -242523530 + L2 LINE L2 2926 3272 0 2136 86 17 7 chr2 8165986 8166276 -242521578 + AluSq SINE Alu 1 293 -20 352 43 0 0 chr2 8166460 8166507 -242521347 - AluY SINE Alu -3 297 251 2365 86 0 10 chr2 8166573 8166875 -242520979 - AluSq SINE Alu -14 299 1 231 133 0 0 chr2 8166914 8166959 -242520895 + (T)n Simple_repeat Simple_repeat 1 45 0 198 0 0 0 chr2 8166988 8167010 -242520844 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr2 8168312 8168333 -242519521 + AT_rich Low_complexity Low_complexity 1 21 0 188 132 151 38 chr2 8168764 8168817 -242519037 - MIR SINE MIR -24 238 180 21 0 0 0 chr2 8170913 8170934 -242516920 + AT_rich Low_complexity Low_complexity 1 21 0 2245 80 0 30 chr2 8170939 8171238 -242516616 + AluSg1 SINE Alu 1 290 -19 379 186 46 56 chr2 8171860 8171983 -242515871 + L1ME LINE L1 5479 5595 -571 230 248 113 68 chr2 8171991 8172124 -242515730 + L1MC4 LINE L1 7903 8041 -1 21 0 0 0 chr2 8174080 8174101 -242513753 + AT_rich Low_complexity Low_complexity 1 21 0 1315 172 0 5 chr2 8176044 8176265 -242511589 + AluJb SINE Alu 85 304 -8 447 290 189 64 chr2 8177387 8177638 -242510216 - L2 LINE L2 -337 2977 2759 1902 124 57 0 chr2 8177638 8177921 -242509933 - AluJb SINE Alu -13 299 1 447 290 189 64 chr2 8177921 8178669 -242509185 - L2 LINE L2 -555 2759 1853 25 0 0 0 chr2 8181923 8181948 -242505906 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 8182761 8182784 -242505070 + AT_rich Low_complexity Low_complexity 1 23 0 208 379 32 0 chr2 8183284 8183379 -242504475 - MIR SINE MIR -69 139 42 252 0 0 0 chr2 8184303 8184331 -242503523 + (CA)n Simple_repeat Simple_repeat 2 29 0 971 108 0 0 chr2 8184537 8184667 -242503187 - AluSg/x SINE Alu -4 308 179 292 327 9 47 chr2 8184729 8184836 -242503018 - MIR SINE MIR -82 126 24 1468 163 21 21 chr2 8185368 8185650 -242502204 - AluJo SINE Alu -30 282 1 1838 143 17 24 chr2 8187306 8187600 -242500254 - AluJb SINE Alu -20 292 1 1705 163 0 14 chr2 8188609 8188885 -242498969 - AluJo SINE Alu -40 272 1 257 339 46 9 chr2 8189078 8189187 -242498667 + L2 LINE L2 3190 3302 -11 21 36 0 0 chr2 8189204 8189232 -242498622 + AT_rich Low_complexity Low_complexity 1 28 0 474 312 75 0 chr2 8191045 8191231 -242496623 + MLT1J LTR MaLR 3 202 -309 452 269 35 29 chr2 8191222 8191393 -242496461 + MLT1J LTR MaLR 340 511 0 * 28 0 0 0 chr2 8191570 8191598 -242496256 + AT_rich Low_complexity Low_complexity 1 28 0 223 304 106 43 chr2 8191791 8191952 -242495902 - MIR SINE MIR -46 216 46 818 266 71 9 chr2 8192555 8192781 -242495073 + MIR SINE MIR 23 262 0 244 200 29 29 chr2 8192971 8193041 -242494813 + GA-rich Low_complexity Low_complexity 4 73 0 771 281 154 7 chr2 8193817 8194318 -242493536 - L2 LINE L2 0 3313 2734 25 31 0 0 chr2 8195629 8195661 -242492193 + AT_rich Low_complexity Low_complexity 1 32 0 450 261 69 0 chr2 8195974 8196104 -242491750 - L2 LINE L2 -15 3298 3160 354 282 115 6 chr2 8196143 8196317 -242491537 + L1ME LINE L1 5586 5778 -343 1647 112 0 60 chr2 8196397 8196647 -242491207 + AluSq SINE Alu 1 235 -78 225 0 0 0 chr2 8196654 8196679 -242491175 + (A)n Simple_repeat Simple_repeat 1 25 0 265 155 0 71 chr2 8196718 8196802 -242491052 + L1ME4a LINE L1 6044 6121 0 2966 136 39 0 chr2 8197449 8197965 -242489889 + Tigger4(Zombi) DNA MER2_type 2196 2731 0 2768 182 56 2 chr2 8198349 8198882 -242488972 + MER68 LTR ERV1 1 562 0 795 67 55 0 chr2 8200047 8200178 -242487676 - LTR12 LTR ERV1 -21 693 270 4644 107 44 92 chr2 8200179 8201156 -242486698 - pTR5 LTR ERV1 -1 2605 1520 3162 95 4 32 chr2 8201153 8201370 -242486484 - HERV9 LTR ERV1 -164 8235 8013 * 2511 62 0 7 chr2 8201370 8201674 -242486180 + AluY SINE Alu 1 302 -9 3162 95 4 32 chr2 8201674 8201950 -242485904 - HERV9 LTR ERV1 -386 8013 7756 1818 182 154 50 chr2 8201944 8202742 -242485112 - Harlequin LTR ERV1 -5176 1720 840 * 27955 90 5 8 chr2 8202743 8207763 -242480091 - Harlequin LTR ERV1 -1994 444 43 4787 80 50 134 chr2 8207763 8208665 -242479189 - LTR12 LTR ERV1 0 826 1 1944 133 32 19 chr2 8209380 8209688 -242478166 - AluSx SINE Alu 0 312 1 2153 143 3 0 chr2 8209718 8210025 -242477829 - AluJb SINE Alu -4 308 1 407 329 62 21 chr2 8210025 8210265 -242477589 - L1M4 LINE L1 -1599 4547 4298 972 73 0 7 chr2 8210875 8211011 -242476843 + L1PA6 LINE L1 5799 5933 -221 207 114 0 0 chr2 8213871 8213906 -242473948 + (T)n Simple_repeat Simple_repeat 1 35 0 1747 112 4 0 chr2 8214392 8214624 -242473230 - AluSx SINE Alu -79 233 1 1568 196 18 3 chr2 8214650 8214936 -242472918 - AluJb SINE Alu -22 290 1 24 0 0 0 chr2 8214936 8214960 -242472894 + AT_rich Low_complexity Low_complexity 1 24 0 249 250 33 43 chr2 8215159 8215251 -242472603 - MIR SINE MIR -123 139 49 291 200 0 0 chr2 8215618 8215673 -242472181 - MER116 DNA Mariner -9 71 17 734 227 76 23 chr2 8215759 8216023 -242471831 + L1ME1 LINE L1 5723 6000 -166 552 228 20 0 chr2 8216054 8216203 -242471651 + L1MA10 LINE L1 6181 6332 -2 21 0 0 0 chr2 8216607 8216628 -242471226 + AT_rich Low_complexity Low_complexity 1 21 0 473 320 47 78 chr2 8217813 8218132 -242469722 + L2 LINE L2 2963 3271 -1 3401 219 58 12 chr2 8218246 8219114 -242468740 - L1M4 LINE L1 -1136 5010 4093 1576 196 38 35 chr2 8219114 8219487 -242468367 - MLT1A2 LTR MaLR 0 374 1 3401 219 58 12 chr2 8219487 8219568 -242468286 - L1M4 LINE L1 -2053 4093 4017 2330 101 0 0 chr2 8220477 8220783 -242467071 - AluSq SINE Alu -7 306 1 981 230 4 4 chr2 8221093 8221371 -242466483 - L1M4 LINE L1 -2909 3237 2960 403 272 99 8 chr2 8222441 8222628 -242465226 - MIR SINE MIR -19 243 38 2520 67 0 6 chr2 8225076 8225388 -242462466 + AluY SINE Alu 1 310 -1 285 245 38 57 chr2 8225880 8225902 -242461952 + MIR SINE MIR 159 180 -82 1252 124 129 0 chr2 8225902 8226111 -242461743 - MER46A DNA MER2_type 0 236 1 285 245 38 57 chr2 8226111 8226194 -242461660 + MIR SINE MIR 180 262 0 204 220 40 0 chr2 8226202 8226252 -242461602 + L2 LINE L2 3261 3312 -1 3827 132 3 2 chr2 8226414 8227021 -242460833 + L1PB3 LINE L1 5545 6152 -2 200 267 173 40 chr2 8227205 8227280 -242460574 - L2 LINE L2 -6 3266 3182 195 342 127 50 chr2 8227412 8227775 -242460079 - L2 LINE L2 -1 3312 2922 986 199 6 0 chr2 8228317 8228488 -242459366 - FAM SINE Alu -3 172 1 903 271 104 56 chr2 8228531 8229270 -242458584 + L2 LINE L2 2545 3313 0 22 56 0 0 chr2 8229873 8229909 -242457945 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 8231481 8231503 -242456351 + AT_rich Low_complexity Low_complexity 1 22 0 1773 172 0 7 chr2 8232742 8233033 -242454821 + AluJo SINE Alu 1 289 -23 23 33 0 0 chr2 8233033 8233063 -242454791 + AT_rich Low_complexity Low_complexity 1 30 0 252 137 0 0 chr2 8234299 8234350 -242453504 + (TA)n Simple_repeat Simple_repeat 1 51 0 2156 121 7 0 chr2 8234814 8235112 -242452742 + AluSx SINE Alu 1 300 -12 732 195 0 8 chr2 8236115 8236238 -242451616 - FLAM_A SINE Alu -11 122 1 2809 3 0 0 chr2 8236387 8236689 -242451165 + AluYa5 SINE Alu 1 302 -9 715 223 42 0 chr2 8237152 8237345 -242450509 - MER20 DNA MER1_type -2 217 17 337 264 114 36 chr2 8237376 8237543 -242450311 - L2 LINE L2 -78 3235 3056 * 2714 291 128 31 chr2 8237538 8239200 -242448654 - L2 LINE L2 -448 2866 1043 2215 119 3 0 chr2 8240259 8240561 -242447293 - AluSx SINE Alu -9 303 1 361 287 144 23 chr2 8240565 8240739 -242447115 + L2 LINE L2 2823 3017 -296 3409 279 106 28 chr2 8240757 8240814 -242447040 - L2 LINE L2 -38 3275 3224 2225 94 30 0 chr2 8240814 8241113 -242446741 + AluSg SINE Alu 2 309 -1 3409 279 106 28 chr2 8241113 8241161 -242446693 - L2 LINE L2 -89 3224 3181 200 59 29 0 chr2 8241161 8241195 -242446659 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3409 279 106 28 chr2 8241195 8242609 -242445245 - L2 LINE L2 -132 3181 1637 384 257 46 28 chr2 8242678 8242787 -242445067 + L2 LINE L2 3203 3313 0 25 51 0 0 chr2 8243156 8243195 -242444659 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 8243300 8243330 -242444524 + AT_rich Low_complexity Low_complexity 1 30 0 1606 174 18 21 chr2 8244106 8244388 -242443466 - AluJo SINE Alu -31 281 1 226 224 134 30 chr2 8245138 8245205 -242442649 + MER5B DNA MER1_type 2 75 -103 210 331 90 8 chr2 8246756 8246889 -242440965 - MIR SINE MIR -33 229 86 252 191 0 73 chr2 8247206 8247274 -242440580 + L1MC1 LINE L1 7 69 -6357 8376 197 63 29 chr2 8247274 8247295 -242440559 + L1MC1 LINE L1 2001 2020 -4593 352 51 34 0 chr2 8247295 8247354 -242440500 + (TG)n Simple_repeat Simple_repeat 2 62 0 8376 197 63 29 chr2 8247354 8248628 -242439226 + L1MC1 LINE L1 2020 3249 -3364 1935 145 30 3 chr2 8248628 8248932 -242438922 + AluJb SINE Alu 1 312 0 8376 197 63 29 chr2 8248932 8249700 -242438154 + L1MC1 LINE L1 3249 3989 -2624 2204 112 3 13 chr2 8249700 8250003 -242437851 + AluSq SINE Alu 1 300 -13 8376 197 63 29 chr2 8250003 8252371 -242435483 + L1MC1 LINE L1 3989 6593 -20 198 103 0 0 chr2 8252380 8252409 -242435445 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1699 187 14 0 chr2 8254372 8254661 -242433193 - AluJb SINE Alu -19 293 1 241 240 264 8 chr2 8255064 8255193 -242432661 + MER103 DNA DNA 1 162 -4 2298 91 3 3 chr2 8255267 8255564 -242432290 - AluSq SINE Alu -16 297 1 24 0 0 0 chr2 8256165 8256189 -242431665 + AT_rich Low_complexity Low_complexity 1 24 0 2379 65 0 10 chr2 8256279 8256585 -242431269 - AluY SINE Alu -8 303 1 239 186 47 0 chr2 8258355 8258398 -242429456 + MER57A LTR ERV1 295 339 -64 597 173 43 81 chr2 8258464 8258649 -242429205 - MER104 DNA MER2_type -1 179 2 500 305 98 42 chr2 8258979 8259477 -242428377 + L1MC/D LINE L1 4859 5384 -762 542 259 141 15 chr2 8259509 8259788 -242428066 + L1MC/D LINE L1 5364 5664 -457 261 191 162 0 chr2 8259851 8259919 -242427935 + L1MC/D LINE L1 5678 5756 -2052 23 33 0 0 chr2 8260164 8260194 -242427660 + AT_rich Low_complexity Low_complexity 1 30 0 1631 155 53 8 chr2 8260221 8260485 -242427369 + AluJo SINE Alu 1 276 -36 1539 165 8 4 chr2 8260485 8260734 -242427120 - AluJb SINE Alu -62 250 1 433 198 10 30 chr2 8263411 8263512 -242424342 - AluJo SINE Alu -162 150 52 206 293 17 0 chr2 8264219 8264277 -242423577 + MIR SINE MIR 85 143 -65 923 183 6 23 chr2 8264879 8265054 -242422800 - FRAM SINE Alu -5 171 1 1125 321 130 19 chr2 8267077 8267240 -242420614 - L2 LINE L2 -37 3276 3132 1926 144 3 10 chr2 8267240 8267531 -242420323 + AluJb SINE Alu 1 289 -23 1125 321 130 19 chr2 8267531 8268275 -242419579 - L2 LINE L2 -181 3132 2251 722 197 8 0 chr2 8269345 8269472 -242418382 + FLAM_C SINE Alu 1 128 -5 25 65 0 0 chr2 8270233 8270279 -242417575 + AT_rich Low_complexity Low_complexity 1 46 0 2663 218 59 26 chr2 8270387 8271081 -242416773 - MER21B LTR ERV1 -49 814 98 226 225 11 101 chr2 8271200 8271289 -242416565 - MER21B LTR ERV1 -766 97 17 1635 191 38 0 chr2 8271296 8271611 -242416243 + MER7A DNA MER2_type 21 345 -1 25 0 0 0 chr2 8272001 8272026 -242415828 + AT_rich Low_complexity Low_complexity 1 25 0 1985 138 7 7 chr2 8272209 8272498 -242415356 - AluSx SINE Alu -23 289 1 327 271 97 32 chr2 8272669 8272824 -242415030 - MIR SINE MIR -48 214 50 856 171 14 47 chr2 8273010 8273221 -242414633 + MER3 DNA MER1_type 1 204 -5 2059 149 0 7 chr2 8273460 8273762 -242414092 + AluSx SINE Alu 4 303 -9 2150 113 0 14 chr2 8274618 8274938 -242412916 - AluSx SINE Alu 0 312 1 45 34 0 0 chr2 8275084 8275143 -242412711 + AT_rich Low_complexity Low_complexity 1 59 0 2307 92 7 0 chr2 8276121 8276416 -242411438 + AluSx SINE Alu 1 297 -15 489 228 0 35 chr2 8276580 8276725 -242411129 - L1ME3 LINE L1 -1 6161 6022 24 67 0 0 chr2 8277156 8277201 -242410653 + AT_rich Low_complexity Low_complexity 1 45 0 251 111 0 22 chr2 8277437 8277482 -242410372 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 2280 97 0 16 chr2 8278547 8278857 -242408997 + AluSg SINE Alu 1 305 -5 1589 192 65 107 chr2 8279204 8279897 -242407957 + L1MC4a LINE L1 6840 7503 -305 2047 147 13 0 chr2 8280024 8280331 -242407523 + AluJb SINE Alu 1 311 -1 1865 128 0 4 chr2 8280331 8280596 -242407258 + AluSx SINE Alu 41 304 -8 503 351 26 22 chr2 8281179 8281410 -242406444 + MIR SINE MIR 5 236 -26 23 33 0 0 chr2 8282118 8282148 -242405706 + AT_rich Low_complexity Low_complexity 1 30 0 2178 107 3 3 chr2 8284447 8284738 -242403116 + AluSx SINE Alu 1 291 -21 266 248 198 66 chr2 8285195 8285316 -242402538 + L2 LINE L2 3136 3272 0 209 138 100 12 chr2 8286025 8286105 -242401749 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 316 284 156 28 chr2 8286356 8286606 -242401248 + MLT1J LTR MaLR 230 511 0 434 226 57 124 chr2 8287138 8287245 -242400609 + MARNA DNA Mariner 88 201 -385 1851 142 16 32 chr2 8287245 8287554 -242400300 + AluJb SINE Alu 1 304 -8 434 226 57 124 chr2 8287554 8287760 -242400094 + MARNA DNA Mariner 201 380 -206 1594 164 82 0 chr2 8287877 8288158 -242399696 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 8288338 8288359 -242399495 + AT_rich Low_complexity Low_complexity 1 21 0 185 333 83 30 chr2 8288997 8289129 -242398725 + MIR SINE MIR 124 262 0 1753 168 7 3 chr2 8289305 8289608 -242398246 + AluJb SINE Alu 2 305 -7 2869 153 12 36 chr2 8289616 8289996 -242397858 + L1MB2 LINE L1 5681 6048 -123 2086 127 3 3 chr2 8289996 8290296 -242397558 + AluSx SINE Alu 1 300 -12 2869 153 12 36 chr2 8290296 8290417 -242397437 + L1MB2 LINE L1 6048 6170 -1 197 116 0 47 chr2 8290468 8290511 -242397343 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2198 79 20 17 chr2 8290710 8291002 -242396852 + AluY SINE Alu 2 294 -17 2354 90 7 0 chr2 8291232 8291542 -242396312 + AluSp SINE Alu 1 312 -1 191 135 27 0 chr2 8291830 8291867 -242395987 + L2 LINE L2 3273 3310 -3 899 224 65 53 chr2 8292249 8292570 -242395284 + L2 LINE L2 2333 2657 -657 1000 99 46 7 chr2 8292574 8292726 -242395128 + L1MA7 LINE L1 6128 6285 -6 708 233 45 11 chr2 8292738 8292914 -242394940 - MER5A DNA MER1_type -6 183 2 439 324 97 29 chr2 8292914 8293396 -242394458 + L2 LINE L2 2709 3225 -88 869 236 68 8 chr2 8293402 8293639 -242394215 + L1ME1 LINE L1 4923 5173 -973 1068 261 40 40 chr2 8293651 8293976 -242393878 + MLT1-int LTR MaLR 1046 1370 -1 1046 243 41 4 chr2 8293976 8294231 -242393623 + L1ME1 LINE L1 5895 6159 -7 290 174 0 0 chr2 8294245 8294291 -242393563 + LTR56 LTR ERV1 349 394 -51 365 230 290 14 chr2 8294304 8294656 -242393198 + L1ME4a LINE L1 5601 6049 -72 246 222 97 14 chr2 8295076 8295148 -242392706 - MLT1K LTR MaLR 0 588 511 2243 118 0 0 chr2 8295326 8295622 -242392232 - AluJb SINE Alu -16 296 1 204 340 10 10 chr2 8295851 8295954 -242391900 + L2 LINE L2 2594 2696 -618 1530 167 19 55 chr2 8296361 8296673 -242391181 - L1MA4 LINE L1 -3 6297 5997 198 283 50 0 chr2 8296730 8296790 -242391064 + MIR SINE MIR 197 259 -3 23 78 0 0 chr2 8296909 8296960 -242390894 + AT_rich Low_complexity Low_complexity 1 51 0 350 365 54 12 chr2 8296961 8297128 -242390726 + L2 LINE L2 3098 3271 -1 451 296 66 28 chr2 8297636 8297849 -242390005 + L2 LINE L2 2673 2893 -421 * 617 248 57 108 chr2 8297844 8298159 -242389695 + L2 LINE L2 3014 3312 -1 242 0 61 0 chr2 8298269 8298302 -242389552 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1757 156 3 27 chr2 8298309 8298610 -242389244 - AluJo SINE Alu -18 294 1 198 324 28 0 chr2 8298631 8298702 -242389152 + L2 LINE L2 3223 3295 -18 699 82 0 10 chr2 8299046 8299144 -242388710 + AluJb SINE Alu 209 305 -7 559 242 24 30 chr2 8299883 8300048 -242387806 - MER5A DNA MER1_type 0 189 26 203 308 51 13 chr2 8300202 8300280 -242387574 + MER5A DNA MER1_type 70 150 -39 180 121 15 61 chr2 8301126 8301192 -242386662 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 1672 139 3 86 chr2 8301640 8301967 -242385887 + AluJo SINE Alu 5 306 0 2592 117 5 8 chr2 8302129 8302505 -242385349 - THE1C LTR MaLR 0 375 1 1794 160 37 7 chr2 8303154 8303454 -242384400 - AluSx SINE Alu -3 309 1 620 240 117 0 chr2 8303653 8303830 -242384024 + MLT1J2 LTR MaLR 244 398 -11 197 214 48 0 chr2 8304539 8304581 -242383273 - L2 LINE L2 -50 3222 3179 384 260 60 72 chr2 8307050 8307291 -242380563 + MLT1G1 LTR MaLR 1 237 -312 228 286 0 0 chr2 8307365 8307421 -242380433 + GA-rich Low_complexity Low_complexity 2 57 0 289 254 16 95 chr2 8307579 8307705 -242380149 + MLT1J2 LTR MaLR 451 566 -29 362 303 99 24 chr2 8308375 8308586 -242379268 + MLT1J-int LTR MaLR 1141 1367 -4 2579 143 43 17 chr2 8308675 8309096 -242378758 + MSTB1 LTR MaLR 1 432 0 265 273 0 15 chr2 8309103 8309169 -242378685 + MLT1J LTR MaLR 64 128 -427 6330 153 48 5 chr2 8309173 8309451 -242378403 + L1PB1 LINE L1 3868 4133 -2018 1082 47 24 12 chr2 8309451 8309621 -242378233 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 6330 153 48 5 chr2 8309621 8311450 -242376404 + L1PB1 LINE L1 4133 6069 -82 385 161 0 0 chr2 8311522 8311584 -242376270 - MER63 DNA MER1_type -756 305 244 269 277 53 0 chr2 8311524 8311618 -242376236 + MER63 DNA MER1_type 426 524 -536 * 884 219 51 30 chr2 8311660 8311897 -242375957 - MER63 DNA MER1_type -815 246 5 * 1136 161 86 48 chr2 8311887 8312135 -242375719 + MER33 DNA MER1_type 10 272 -2313 2361 107 7 0 chr2 8312135 8312443 -242375411 - AluSx SINE Alu -2 310 1 1136 161 86 48 chr2 8312443 8312486 -242375368 + MER33 DNA MER1_type 272 312 -12 506 247 96 18 chr2 8312541 8312707 -242375147 + MLT1J LTR MaLR 231 409 -102 207 0 0 0 chr2 8312736 8312759 -242375095 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 228 300 43 0 chr2 8313038 8313108 -242374746 + MIR SINE MIR 74 146 -116 390 286 64 82 chr2 8313309 8313529 -242374325 + MLT1L LTR MaLR 389 604 -11 3074 226 83 11 chr2 8314074 8315386 -242372468 + L1ME2 LINE L1 4705 6106 -58 1118 198 60 52 chr2 8315553 8315821 -242372033 - Tigger1 DNA MER2_type -2141 277 8 4331 208 79 31 chr2 8315967 8316962 -242370892 - L1MB7 LINE L1 -10 6174 5227 1632 163 10 42 chr2 8316962 8317268 -242370586 - AluJo SINE Alu -14 298 3 4331 208 79 31 chr2 8317268 8318127 -242369727 - L1MB7 LINE L1 -957 5227 4246 2639 251 156 25 chr2 8318116 8319683 -242368171 - L1M4c LINE L1 -3950 2875 966 * 1104 225 136 108 chr2 8320164 8320865 -242366989 + LTR8A LTR ERV1 1 720 -7 465 233 25 63 chr2 8320893 8321052 -242366802 - L1M4c LINE L1 -6320 222 70 283 274 82 0 chr2 8322870 8322943 -242364911 - L2 LINE L2 -57 3215 3137 589 170 156 21 chr2 8322987 8323128 -242364726 + MER104 DNA Tc2 18 177 -3 557 251 114 0 chr2 8323130 8323297 -242364557 - MIR SINE MIR -63 199 14 952 182 0 28 chr2 8323316 8323492 -242364362 - AluJb SINE Alu 0 312 142 243 282 94 0 chr2 8324092 8324177 -242363677 - MIR SINE MIR -7 255 163 2876 133 27 0 chr2 8325035 8325449 -242362405 - MSTA LTR MaLR -3 425 1 1920 192 113 21 chr2 8325677 8326156 -242361698 - Charlie1b DNA MER1_type 0 523 1 366 80 0 0 chr2 8326521 8326571 -242361283 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 1833 166 0 3 chr2 8326571 8326855 -242360999 - AluJb SINE Alu -29 283 1 675 118 0 0 chr2 8326876 8326969 -242360885 - L1P4 LINE L1 -469 5705 5613 3996 45 68 0 chr2 8326973 8327490 -242360364 + LTR30 LTR ERV1 1 552 -170 3461 16 3 0 chr2 8327490 8327876 -242359978 - L1PA4 LINE L1 -208 5947 5561 1700 45 0 0 chr2 8327876 8328078 -242359776 + L1PA4 LINE L1 5952 6153 -2 1390 78 6 0 chr2 8328078 8328257 -242359597 + LTR30 LTR ERV1 543 722 0 3672 77 14 115 chr2 8328257 8328545 -242359309 - L1PA8A LINE L1 -499 5632 5316 440 103 0 0 chr2 8328545 8328603 -242359251 - MSTA LTR MaLR -95 333 276 3672 77 14 115 chr2 8328603 8329171 -242358683 - L1PA8A LINE L1 -815 5316 4770 368 255 101 90 chr2 8329817 8330005 -242357849 + MIR SINE MIR 56 245 -17 1441 190 30 7 chr2 8330569 8330838 -242357016 - AluJo SINE Alu -30 282 8 284 327 9 47 chr2 8333304 8333411 -242354443 - MIR SINE MIR -82 126 24 267 279 29 0 chr2 8333741 8333809 -242354045 + L2 LINE L2 3153 3222 -50 2099 99 7 20 chr2 8334112 8334406 -242353448 + AluSg SINE Alu 21 310 0 222 37 0 0 chr2 8334414 8334441 -242353413 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 467 248 14 43 chr2 8335364 8335505 -242352349 - L2 LINE L2 0 3272 3136 2302 106 0 3 chr2 8337872 8338183 -242349671 - AluSx SINE Alu -2 310 1 744 100 27 0 chr2 8338998 8339108 -242348746 + MER3 DNA MER1_type 1 113 -96 1050 98 92 0 chr2 8339110 8339263 -242348591 + AluSg/x SINE Alu 139 305 -7 417 214 102 10 chr2 8339263 8339361 -242348493 + MER3 DNA MER1_type 103 209 0 197 257 139 0 chr2 8340025 8340126 -242347728 + L2 LINE L2 2230 2344 -970 * 251 300 29 0 chr2 8340124 8340194 -242347660 - L2 LINE L2 0 3313 3242 812 239 25 5 chr2 8340402 8340599 -242347255 + MER20 DNA MER1_type 1 201 -18 2197 113 0 3 chr2 8341460 8341753 -242346101 - AluSg SINE Alu -18 292 1 324 0 0 0 chr2 8342239 8342275 -242345579 + (CA)n Simple_repeat Simple_repeat 2 37 0 321 275 107 20 chr2 8342925 8343074 -242344780 + MIR SINE MIR 101 262 0 417 320 64 0 chr2 8343461 8343586 -242344268 - L2 LINE L2 -1 3271 3139 450 344 0 7 chr2 8343779 8343933 -242343921 - MIR SINE MIR -109 153 1 9436 136 25 11 chr2 8344058 8345682 -242342172 + Tigger1 DNA MER2_type 1 1647 -771 435 52 0 0 chr2 8345866 8345924 -242341930 + (TA)n Simple_repeat Simple_repeat 2 59 0 1317 164 36 73 chr2 8345924 8346198 -242341656 - AluJb SINE Alu -2 310 47 25 0 0 0 chr2 8346206 8346231 -242341623 + AT_rich Low_complexity Low_complexity 1 25 0 2378 91 3 0 chr2 8346432 8346728 -242341126 - AluSp SINE Alu -16 297 1 593 223 152 40 chr2 8346815 8347039 -242340815 - LTR50 LTR ERVL -356 439 191 189 0 0 0 chr2 8347220 8347241 -242340613 + (A)n Simple_repeat Simple_repeat 1 21 0 416 301 124 16 chr2 8347704 8347890 -242339964 - MIR3 SINE MIR -1 207 2 334 277 187 24 chr2 8348144 8348310 -242339544 - MIR SINE MIR -50 212 20 776 204 15 91 chr2 8349375 8349704 -242338150 + L1MC4 LINE L1 7738 8041 -1 358 250 36 18 chr2 8349997 8350109 -242337745 + MIR SINE MIR 31 144 -118 2219 106 10 0 chr2 8350232 8350525 -242337329 - AluSx SINE Alu -16 296 1 195 218 0 0 chr2 8351248 8351303 -242336551 + GA-rich Low_complexity Low_complexity 3 57 0 1127 157 41 83 chr2 8351939 8352181 -242335673 + AluJb SINE Alu 79 310 -2 408 55 0 0 chr2 8352183 8352238 -242335616 + (TA)n Simple_repeat Simple_repeat 1 55 0 279 282 56 51 chr2 8352544 8352760 -242335094 - L1MEd LINE L1 -4881 1238 1022 29 28 0 0 chr2 8352905 8352941 -242334913 + AT_rich Low_complexity Low_complexity 1 36 0 1887 143 14 0 chr2 8353381 8353702 -242334152 + AluSx SINE Alu 1 325 0 1294 251 256 3 chr2 8353782 8354416 -242333438 - LTR50 LTR ERVL -1 794 1 1469 174 14 56 chr2 8354635 8354922 -242332932 + AluJo SINE Alu 1 275 -37 560 119 50 0 chr2 8354959 8355060 -242332794 + L1MC4a LINE L1 6890 6995 -813 1714 176 41 13 chr2 8355190 8355581 -242332273 - LTR52 LTR ERVL -9 412 11 2046 160 21 0 chr2 8355601 8355976 -242331878 + MLT1B LTR MaLR 1 383 -7 2188 121 3 3 chr2 8356687 8356992 -242330862 + AluSx SINE Alu 6 310 -2 270 293 98 12 chr2 8356998 8357080 -242330774 + MIR SINE MIR 20 108 -154 2289 102 10 0 chr2 8357260 8357553 -242330301 - AluSp SINE Alu -17 296 1 21 36 0 0 chr2 8357559 8357587 -242330267 + AT_rich Low_complexity Low_complexity 1 28 0 468 239 118 31 chr2 8358619 8358987 -242328867 - L1ME LINE L1 -528 5593 5175 225 132 0 26 chr2 8359698 8359736 -242328118 + MER3 DNA MER1_type 46 82 -127 513 225 17 0 chr2 8360179 8360299 -242327555 + MER33 DNA MER1_type 1 122 -202 283 329 50 56 chr2 8360355 8360516 -242327338 - MER5A DNA MER1_type -12 177 18 586 298 116 6 chr2 8360614 8360976 -242326878 + L1ME3 LINE L1 5428 5829 -333 747 256 53 112 chr2 8361519 8361925 -242325929 - L1MC4 LINE L1 -561 7481 7130 437 90 15 0 chr2 8361925 8361992 -242325862 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 747 256 53 112 chr2 8361992 8362265 -242325589 - L1MC4 LINE L1 -912 7130 6842 2177 174 133 2 chr2 8362435 8362888 -242324966 - MLT2B2 LTR ERVL -3 512 1 694 254 181 14 chr2 8362900 8363370 -242324484 - MLT1H LTR MaLR -5 550 8 1252 108 0 0 chr2 8364210 8364367 -242323487 + AluSq SINE Alu 1 157 -156 1445 88 83 5 chr2 8364367 8364584 -242323270 + L1PB1 LINE L1 5918 6151 0 23 0 0 0 chr2 8364584 8364607 -242323247 + AT_rich Low_complexity Low_complexity 1 23 0 4450 135 5 23 chr2 8364626 8365405 -242322449 + L1PB4 LINE L1 5378 6142 -14 396 0 0 0 chr2 8365776 8365820 -242322034 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 602 176 57 100 chr2 8367361 8367571 -242320283 - MER3 DNA MER1_type -8 201 1 2193 112 3 0 chr2 8368382 8368687 -242319167 + AluSq SINE Alu 1 306 -7 615 297 108 0 chr2 8369060 8369282 -242318572 - MIR SINE MIR -12 250 5 2055 134 0 3 chr2 8369309 8369636 -242318218 - AluSx SINE Alu 0 312 1 214 158 53 35 chr2 8370203 8370260 -242317594 + C-rich Low_complexity Low_complexity 1 58 0 22 99 0 0 chr2 8370369 8370440 -242317414 + GC_rich Low_complexity Low_complexity 1 71 0 517 246 222 10 chr2 8371180 8371387 -242316467 - MIR SINE MIR -3 259 9 544 97 0 0 chr2 8372114 8372186 -242315668 + AluJ/FRAM SINE Alu 222 293 -19 2090 113 17 13 chr2 8372188 8372489 -242315365 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr2 8372503 8372528 -242315326 + (GA)n Simple_repeat Simple_repeat 2 26 0 728 278 86 17 chr2 8372591 8372825 -242315029 + MIR SINE MIR 3 252 -10 2249 188 34 34 chr2 8372828 8372893 -242314961 - MLT2B1 LTR ERVL -8 512 448 481 75 12 12 chr2 8372893 8372973 -242314881 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2249 188 34 34 chr2 8372973 8373413 -242314441 - MLT2B1 LTR ERVL -71 449 7 198 189 0 0 chr2 8373701 8373738 -242314116 - MIR SINE MIR -10 252 216 443 285 27 43 chr2 8373873 8374039 -242313815 + MIR SINE MIR 19 180 -66 217 262 110 84 chr2 8374611 8374802 -242313052 + MIR3 SINE MIR 5 200 -8 538 229 260 10 chr2 8376294 8376486 -242311368 + MIR SINE MIR 22 261 -1 186 174 0 0 chr2 8376491 8376537 -242311317 + (CAT)n Simple_repeat Simple_repeat 3 48 0 1502 106 5 0 chr2 8376614 8376831 -242311023 + L1PA10 LINE L1 5949 6166 -2 374 351 27 21 chr2 8377594 8377782 -242310072 + MER5A DNA MER1_type 1 189 0 922 243 65 90 chr2 8378456 8378565 -242309289 - HAL1 LINE L1 -31 2476 2366 2053 108 19 54 chr2 8378565 8378881 -242308973 - AluSx SINE Alu -7 305 1 922 243 65 90 chr2 8378881 8379281 -242308573 - HAL1 LINE L1 -141 2366 1980 338 351 31 4 chr2 8379391 8379619 -242308235 - HAL1 LINE L1 -510 1997 1764 457 180 39 47 chr2 8379794 8379922 -242307932 + MER106A DNA MER1_type 108 234 -2 1333 214 88 30 chr2 8380176 8380675 -242307179 - HAL1 LINE L1 -910 1597 1070 2315 116 0 19 chr2 8381127 8381445 -242306409 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 8381728 8381750 -242306104 + AT_rich Low_complexity Low_complexity 1 22 0 363 193 36 12 chr2 8382953 8383036 -242304818 - L2 LINE L2 0 3313 3229 27 62 0 0 chr2 8383520 8383568 -242304286 + AT_rich Low_complexity Low_complexity 1 48 0 709 45 0 0 chr2 8383890 8383978 -242303876 + L1PA5 LINE L1 11 98 -6048 * 24800 49 3 1 chr2 8383976 8389493 -242298361 + L1PA5 LINE L1 623 6154 0 363 233 126 37 chr2 8389608 8389823 -242298031 + L1MC/D LINE L1 5311 5544 -2264 765 293 120 13 chr2 8390058 8390509 -242297345 + MLT1L LTR MaLR 24 522 -93 207 275 0 58 chr2 8391670 8391739 -242296115 - L2 LINE L2 -66 3206 3142 16468 187 52 17 chr2 8391878 8393007 -242294847 - L1PA15-16 LINE L1 -948 5901 4813 2282 82 0 0 chr2 8393007 8393315 -242294539 - AluY SINE Alu 0 308 1 16468 187 52 17 chr2 8393315 8393796 -242294058 - L1PA15-16 LINE L1 -2036 4813 4350 2175 135 0 0 chr2 8393796 8394093 -242293761 - AluSx SINE Alu -15 297 1 16468 187 52 17 chr2 8394093 8398208 -242289646 - L1PA15-16 LINE L1 -2499 4350 10 3140 126 23 6 chr2 8398224 8398741 -242289113 + Tigger1 DNA MER2_type 1893 2418 0 1728 180 27 23 chr2 8399005 8399305 -242288549 + AluJo SINE Alu 1 301 -11 347 220 86 59 chr2 8399619 8399805 -242288049 + L1MC5 LINE L1 7717 7907 -54 1970 174 0 3 chr2 8402038 8402349 -242285505 - AluJb SINE Alu -2 310 1 199 204 0 23 chr2 8402873 8402917 -242284937 - L2 LINE L2 0 3272 3230 226 246 87 14 chr2 8403328 8403397 -242284457 + MER5A DNA MER1_type 63 136 -53 327 328 82 16 chr2 8403729 8404144 -242283710 + L1ME LINE L1 5308 5706 -415 265 342 0 8 chr2 8404328 8404445 -242283409 + LTR16B LTR ERVL 1 116 -348 365 208 13 0 chr2 8404712 8404789 -242283065 - MIR SINE MIR -47 215 138 246 156 0 0 chr2 8405235 8405280 -242282574 + (CA)n Simple_repeat Simple_repeat 1 45 0 207 0 0 0 chr2 8407036 8407059 -242280795 + (CA)n Simple_repeat Simple_repeat 1 23 0 374 222 51 34 chr2 8407062 8407179 -242280675 + HAL1 LINE L1 795 913 -1594 1619 224 69 93 chr2 8407380 8407521 -242280333 + HAL1 LINE L1 971 1114 -1393 2207 105 0 7 chr2 8407521 8407816 -242280038 + AluSp SINE Alu 3 295 -18 1619 224 69 93 chr2 8407816 8408044 -242279810 + HAL1 LINE L1 1114 1346 -1161 2108 121 0 23 chr2 8408044 8408349 -242279505 + AluSx SINE Alu 1 298 -14 1619 224 69 93 chr2 8408349 8408493 -242279361 + HAL1 LINE L1 1346 1492 -1015 2396 57 3 3 chr2 8408493 8408789 -242279065 + AluY SINE Alu 1 296 -15 1619 224 69 93 chr2 8408789 8409152 -242278702 + HAL1 LINE L1 1492 1828 -679 304 309 36 63 chr2 8409292 8409515 -242278339 + HAL1 LINE L1 1849 2065 -442 237 245 49 0 chr2 8409540 8409642 -242278212 + HAL1 LINE L1 2068 2174 -333 4677 157 30 50 chr2 8409662 8410540 -242277314 + L1MB7 LINE L1 4901 5740 -444 2535 109 3 8 chr2 8410540 8410906 -242276948 - THE1B LTR MaLR 0 364 1 4677 157 30 50 chr2 8410906 8411330 -242276524 + L1MB7 LINE L1 5740 6171 -13 42829 36 0 0 chr2 8411350 8417515 -242270339 + L1PA4 LINE L1 4 6169 0 2408 81 3 0 chr2 8417517 8417812 -242270042 + AluSg SINE Alu 1 296 -14 374 291 108 24 chr2 8417812 8418107 -242269747 + HAL1 LINE L1 2187 2506 -1 429 293 73 24 chr2 8418424 8418629 -242269225 + MIR SINE MIR 37 251 -11 226 318 106 65 chr2 8419017 8419234 -242268620 + MIR SINE MIR 31 256 -6 1576 172 11 8 chr2 8419660 8419921 -242267933 - AluJb SINE Alu -44 268 7 345 267 151 5 chr2 8419953 8420187 -242267667 - L1ME2 LINE L1 -248 5914 5650 626 246 5 5 chr2 8420188 8420375 -242267479 - Charlie1 DNA MER1_type 0 2761 2575 629 292 5 10 chr2 8420381 8420598 -242267256 - L1ME2 LINE L1 -567 5599 5405 1808 134 33 24 chr2 8420810 8421139 -242266715 + MER1B DNA MER1_type 8 339 0 318 238 86 29 chr2 8421247 8421352 -242266502 + MIR SINE MIR 107 217 -45 491 206 44 56 chr2 8421356 8421516 -242266338 + L1MC4a LINE L1 5775 5932 -1876 360 0 0 0 chr2 8421538 8421578 -242266276 + (TA)n Simple_repeat Simple_repeat 2 41 0 2104 261 71 50 chr2 8421596 8421654 -242266200 + L1MC4a LINE L1 6104 6159 -1649 180 77 0 0 chr2 8421654 8421680 -242266174 + (TTAAA)n Simple_repeat Simple_repeat 3 28 0 2104 261 71 50 chr2 8421680 8422650 -242265204 + L1MC4a LINE L1 6159 7154 -654 295 276 152 21 chr2 8422726 8422868 -242264986 - MIR SINE MIR -62 146 15 22 0 0 0 chr2 8423507 8423529 -242264325 + AT_rich Low_complexity Low_complexity 1 22 0 2764 142 11 2 chr2 8423727 8424177 -242263677 - L1PA16 LINE L1 -1 6165 5712 2170 93 11 0 chr2 8424648 8424968 -242262886 - AluSg1 SINE Alu 0 323 1 1662 152 74 0 chr2 8425224 8425493 -242262361 - AluJb SINE Alu -23 289 1 322 333 139 6 chr2 8425524 8425689 -242262165 - MIR SINE MIR -38 224 38 208 269 0 0 chr2 8426413 8426465 -242261389 + L2 LINE L2 3262 3313 0 23 33 0 0 chr2 8428050 8428080 -242259774 + AT_rich Low_complexity Low_complexity 1 30 0 1191 222 18 45 chr2 8429504 8429901 -242257953 + L1ME1 LINE L1 5776 6161 -5 26 0 0 0 chr2 8429905 8429931 -242257923 + AT_rich Low_complexity Low_complexity 1 26 0 252 174 29 72 chr2 8430203 8430272 -242257582 - MIR3 SINE MIR -28 180 115 * 770 334 153 14 chr2 8430268 8431150 -242256704 + L2 LINE L2 2170 3179 -134 1623 100 4 8 chr2 8431291 8431532 -242256322 + L1PA8 LINE L1 5931 6170 -2 433 226 0 10 chr2 8431584 8431686 -242256168 + U13 snRNA snRNA 1 101 -3 305 264 94 19 chr2 8432150 8432256 -242255598 + L2 LINE L2 3189 3302 -11 251 294 118 8 chr2 8433045 8433164 -242254690 + MIR SINE MIR 55 186 -76 3496 152 73 6 chr2 8433356 8434045 -242253809 + L1MB8 LINE L1 5442 6176 -2 228 316 0 13 chr2 8434334 8434413 -242253441 + GA-rich Low_complexity Low_complexity 1 78 0 291 346 42 42 chr2 8434643 8434860 -242252994 + MIR SINE MIR 34 250 -12 525 194 0 11 chr2 8435393 8435486 -242252368 - L2 LINE L2 0 3272 3181 723 266 46 8 chr2 8435992 8436233 -242251621 + L1M4 LINE L1 3384 3633 -2513 947 236 98 0 chr2 8436237 8436513 -242251341 + L1MC4 LINE L1 7596 7898 -144 22 56 0 0 chr2 8436546 8436582 -242251272 + AT_rich Low_complexity Low_complexity 1 36 0 1525 148 67 78 chr2 8436718 8437091 -242250763 + L1MB2 LINE L1 5793 6161 -10 781 287 92 47 chr2 8438078 8438569 -242249285 + L2 LINE L2 2228 2740 -574 2008 178 18 50 chr2 8438582 8438983 -242248871 + L1MC3 LINE L1 7138 7525 -260 1809 144 46 7 chr2 8438983 8439267 -242248587 + AluJb SINE Alu 1 295 -17 2008 178 18 50 chr2 8439267 8439309 -242248545 + L1MC3 LINE L1 7525 7567 -218 1538 167 23 87 chr2 8439310 8439702 -242248152 + MLT1A2 LTR MaLR 3 505 0 1113 159 14 14 chr2 8439709 8439929 -242247925 + L1MC3 LINE L1 7566 7785 0 442 176 0 69 chr2 8440060 8440162 -242247692 + L1ME2 LINE L1 6069 6163 -1 393 279 33 25 chr2 8440197 8440319 -242247535 - MLT1G3 LTR MaLR -27 568 446 * 728 258 36 0 chr2 8440297 8440464 -242247390 - MLT1G3 LTR MaLR -187 343 171 338 252 47 16 chr2 8440521 8440648 -242247206 + L1ME4a LINE L1 5991 6121 0 261 327 44 25 chr2 8440663 8440822 -242247032 - Tigger8 DNA MER2_type -2 664 503 555 307 135 17 chr2 8441886 8442300 -242245554 - Tigger8 DNA MER2_type -162 504 42 224 374 0 26 chr2 8442418 8442533 -242245321 + L3 LINE CR1 1366 1477 -100 187 239 45 114 chr2 8442645 8442733 -242245121 - MIR SINE MIR -170 92 11 22 0 0 0 chr2 8443022 8443044 -242244810 + AT_rich Low_complexity Low_complexity 1 22 0 306 282 122 32 chr2 8444220 8444376 -242243478 - L3 LINE CR1 -384 1193 1024 481 264 37 62 chr2 8444454 8444696 -242243158 + MER102b DNA MER1_type 97 332 -9 763 173 0 36 chr2 8444986 8445125 -242242729 - FLAM_C SINE Alu -8 135 2 300 237 13 0 chr2 8446693 8446769 -242241085 - MIR SINE MIR -119 143 67 241 175 0 0 chr2 8447815 8447855 -242239999 + L1M2 LINE L1 5600 5639 -661 329 50 0 0 chr2 8447855 8447895 -242239959 + AluSc SINE Alu 216 255 -44 2582 50 0 3 chr2 8448280 8448580 -242239274 - AluY SINE Alu -12 299 1 251 350 0 20 chr2 8448709 8448809 -242239045 - MER5A DNA MER1_type -85 104 7 196 260 0 0 chr2 8448911 8448961 -242238893 - L2 LINE L2 -1444 1870 1821 604 249 135 54 chr2 8449186 8449535 -242238319 + LTR33 LTR ERVL 144 520 -1 417 236 67 61 chr2 8450349 8450514 -242237340 - MIR SINE MIR -52 210 45 187 231 154 0 chr2 8451164 8451229 -242236625 + MIR SINE MIR 123 197 -65 941 168 14 0 chr2 8453246 8453389 -242234465 - Tigger3b DNA MER2_type 0 1231 1087 4520 136 75 41 chr2 8453394 8454240 -242233614 - Tigger3b DNA MER2_type -357 874 1 1697 170 16 31 chr2 8456026 8456343 -242231511 + AluJo SINE Alu 1 312 0 931 102 5 43 chr2 8456344 8456530 -242231324 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 811 131 32 20 chr2 8456516 8456768 -242231086 + GA-rich Low_complexity Low_complexity 1 255 0 * 28 29 0 0 chr2 8457427 8457462 -242230392 + AT_rich Low_complexity Low_complexity 1 35 0 2923 176 54 48 chr2 8458323 8459029 -242228825 - MER67C LTR ERV1 0 710 1 353 225 22 0 chr2 8459383 8459472 -242228382 - HsTC2 DNA Tc2 -2 1896 1806 2620 200 89 21 chr2 8459501 8460627 -242227227 - L1M3c LINE L1 -4805 1336 3 10605 158 76 48 chr2 8460709 8461298 -242226556 - L1MC3 LINE L1 0 7785 7214 308 284 0 0 chr2 8461298 8461379 -242226475 - MLT1F1 LTR MaLR -442 125 45 10605 158 76 48 chr2 8461379 8462937 -242224917 - L1MC3 LINE L1 -571 7214 5497 611 272 122 68 chr2 8462937 8463404 -242224450 - LTR67 LTR ERVL -34 523 32 444 264 121 37 chr2 8463436 8463784 -242224070 + L1ME4a LINE L1 5699 6075 -46 21 0 0 0 chr2 8463789 8463810 -242224044 + AT_rich Low_complexity Low_complexity 1 21 0 1963 149 10 3 chr2 8463819 8464115 -242223739 + AluSx SINE Alu 1 298 -14 948 292 40 47 chr2 8464354 8464827 -242223027 - MLT1J LTR MaLR -9 502 33 564 195 81 0 chr2 8464827 8464950 -242222904 + FLAM_A SINE Alu 1 133 0 644 106 0 10 chr2 8464955 8465059 -242222795 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 228 311 39 19 chr2 8465079 8465182 -242222672 - MER5B DNA MER1_type 0 178 74 1734 145 31 102 chr2 8465594 8466014 -242221840 + MLT1B LTR MaLR 1 390 0 640 202 9 0 chr2 8466135 8466249 -242221605 - MER31B LTR ERV1 -351 115 1 2223 119 7 0 chr2 8466997 8467300 -242220554 - AluSq SINE Alu -8 305 1 279 250 71 120 chr2 8467303 8467487 -242220367 - MER5B DNA MER1_type -3 175 1 421 296 0 0 chr2 8467487 8467595 -242220259 - MIR3 SINE MIR -48 160 53 650 156 266 0 chr2 8467845 8467999 -242219855 + L1PA16 LINE L1 5963 6157 -9 1926 137 50 7 chr2 8468041 8468341 -242219513 + AluSq SINE Alu 1 313 0 3061 161 78 24 chr2 8469029 8469661 -242218193 + MER39 LTR ERV1 1 707 0 2106 116 184 68 chr2 8469736 8470145 -242217709 + LTR54 LTR ERV1 1 470 -40 1618 184 0 49 chr2 8470145 8470449 -242217405 + AluJb SINE Alu 3 291 -21 2106 116 184 68 chr2 8470449 8470496 -242217358 + LTR54 LTR ERV1 470 510 0 1248 157 5 18 chr2 8472021 8472238 -242215616 + AluJo SINE Alu 85 298 -14 2299 97 0 26 chr2 8472318 8472627 -242215227 + AluSc SINE Alu 1 301 -8 2130 123 13 7 chr2 8472689 8472990 -242214864 + AluSx SINE Alu 1 303 -9 417 133 0 0 chr2 8473307 8473367 -242214487 + AluS SINE Alu 2 61 -257 189 271 93 19 chr2 8473382 8473489 -242214365 + MIR3 SINE MIR 87 201 -7 274 241 17 129 chr2 8473659 8473716 -242214138 + L3 LINE CR1 1282 1321 -256 1944 147 3 0 chr2 8473716 8474009 -242213845 + AluJb SINE Alu 1 294 -18 274 241 17 129 chr2 8474009 8474067 -242213787 + L3 LINE CR1 1321 1384 -193 530 293 72 14 chr2 8474107 8474329 -242213525 - MIR SINE MIR -26 236 2 246 277 15 0 chr2 8474357 8474422 -242213432 - L1MEc LINE L1 -5026 1370 1305 2634 64 0 0 chr2 8474486 8474797 -242213057 + AluY SINE Alu 1 311 0 630 263 84 49 chr2 8475209 8475547 -242212307 - L1MEc LINE L1 -4932 1273 932 2584 196 12 24 chr2 8475547 8476058 -242211796 - MLT1D LTR MaLR 0 505 1 630 263 84 49 chr2 8476058 8476133 -242211721 - L1MEc LINE L1 -5273 932 861 515 320 44 58 chr2 8476574 8476918 -242210936 - L2 LINE L2 -6 3266 2928 1597 142 0 28 chr2 8478617 8478870 -242208984 - AluJb SINE Alu -9 303 58 1873 152 3 3 chr2 8479814 8480103 -242207751 + AluJb SINE Alu 1 289 -23 409 278 44 58 chr2 8481125 8481330 -242206524 - MIR SINE MIR -2 260 59 1026 193 111 50 chr2 8481332 8481612 -242206242 - L1ME3A LINE L1 -1 6169 5873 1080 240 130 22 chr2 8481614 8482068 -242205786 - L1ME3A LINE L1 -1155 4991 4489 1667 149 0 0 chr2 8482068 8482323 -242205531 - AluSx SINE Alu -2 310 56 2286 257 89 40 chr2 8482423 8482494 -242205360 - L1ME3A LINE L1 -2576 3570 3504 2241 102 0 0 chr2 8482494 8482804 -242205050 - AluSg SINE Alu 0 310 1 2286 257 89 40 chr2 8482804 8482954 -242204900 - L1ME3A LINE L1 -2642 3504 3363 2580 61 0 13 chr2 8482954 8483267 -242204587 - AluY SINE Alu -2 309 1 2286 257 89 40 chr2 8483267 8483518 -242204336 - L1ME3A LINE L1 -2783 3363 3126 1217 152 46 112 chr2 8483518 8483693 -242204161 - AluSq SINE Alu -9 304 158 207 0 0 0 chr2 8483693 8483716 -242204138 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1217 152 46 112 chr2 8483716 8483863 -242203991 - AluSq SINE Alu -155 158 3 2286 257 89 40 chr2 8483863 8484596 -242203258 - L1ME3A LINE L1 -3020 3126 2303 608 192 8 0 chr2 8484644 8484774 -242203080 - L1M4 LINE L1 -2154 3992 3862 203 286 62 54 chr2 8484809 8484921 -242202933 - L2 LINE L2 0 3272 3160 981 146 19 13 chr2 8485391 8485726 -242202128 + FRAM SINE Alu 1 332 0 205 237 0 0 chr2 8485726 8485764 -242202090 + polypurine Low_complexity Low_complexity 3 40 0 2370 90 0 0 chr2 8486918 8487206 -242200648 + AluSx SINE Alu 1 288 -24 189 196 0 0 chr2 8487810 8487856 -242199998 + (CCA)n Simple_repeat Simple_repeat 2 47 0 660 192 0 17 chr2 8489714 8489886 -242197968 + (TG)n Simple_repeat Simple_repeat 2 170 0 245 263 219 53 chr2 8490115 8490229 -242197625 - L2 LINE L2 0 3272 3140 259 324 36 27 chr2 8491443 8491554 -242196300 - MIR SINE MIR -70 192 81 2035 151 20 0 chr2 8492312 8492610 -242195244 + AluJb SINE Alu 2 305 -7 2295 122 0 0 chr2 8493348 8493642 -242194212 + AluSx SINE Alu 1 294 -18 407 247 77 71 chr2 8494016 8494186 -242193668 - MIR SINE MIR -61 201 31 672 325 40 4 chr2 8494441 8494693 -242193161 + MIR SINE MIR 1 261 -1 2116 180 62 5 chr2 8494778 8495211 -242192643 - MER65C LTR ERV1 -2 459 2 2406 96 0 0 chr2 8496782 8497085 -242190769 + AluSx SINE Alu 1 303 -9 414 262 51 98 chr2 8497799 8498013 -242189841 + MIR SINE MIR 3 206 -56 284 235 15 15 chr2 8498789 8498852 -242189002 - MIR SINE MIR -36 226 164 450 289 94 25 chr2 8498852 8499076 -242188778 + MIR SINE MIR 3 239 -23 189 264 125 14 chr2 8499094 8499166 -242188688 - MIR SINE MIR -123 139 60 701 293 173 17 chr2 8500923 8501340 -242186514 + L1ME3A LINE L1 5433 5914 -256 2088 154 0 0 chr2 8501435 8501741 -242186113 + AluJb SINE Alu 1 306 -6 1835 103 107 11 chr2 8503600 8503897 -242183957 + AluSx SINE Alu 2 312 0 579 299 83 25 chr2 8503909 8504150 -242183704 + MIR SINE MIR 8 262 0 389 319 187 20 chr2 8504815 8505413 -242182441 + L2 LINE L2 2034 2731 -583 237 243 0 0 chr2 8505497 8505604 -242182250 + CT-rich Low_complexity Low_complexity 4 110 0 222 273 210 49 chr2 8506830 8506882 -242180972 + MIR SINE MIR 96 138 -124 2268 97 60 31 chr2 8506882 8507234 -242180620 + THE1B LTR MaLR 3 364 0 222 273 210 49 chr2 8507234 8507324 -242180530 + MIR SINE MIR 138 261 -1 1091 203 37 67 chr2 8507397 8507670 -242180184 + L1ME2 LINE L1 5643 5907 -257 1848 184 23 3 chr2 8507670 8507975 -242179879 - AluJb SINE Alu -1 311 1 1091 203 37 67 chr2 8507975 8508048 -242179806 + L1ME2 LINE L1 5907 5981 -183 396 338 29 0 chr2 8508302 8508438 -242179416 - MIR SINE MIR -10 252 113 381 227 58 138 chr2 8509098 8509184 -242178670 - L1ME LINE L1 -429 5692 5601 1952 171 0 0 chr2 8509184 8509489 -242178365 - AluJo SINE Alu -2 310 6 381 227 58 138 chr2 8509489 8509627 -242178227 - L1ME LINE L1 -520 5601 5486 2230 99 0 7 chr2 8509816 8510108 -242177746 - AluY SINE Alu -21 290 1 201 176 0 0 chr2 8510223 8510257 -242177597 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 580 273 64 11 chr2 8510345 8510532 -242177322 - MIR SINE MIR -28 234 38 441 286 67 0 chr2 8510579 8510698 -242177156 + MIR SINE MIR 23 149 -113 2294 105 3 0 chr2 8510887 8511191 -242176663 + AluSq SINE Alu 1 305 -8 2018 137 6 26 chr2 8511712 8512025 -242175829 - AluJo SINE Alu -5 307 1 353 203 0 14 chr2 8512583 8512652 -242175202 + MIR3 SINE MIR 89 156 -52 1698 228 13 51 chr2 8512991 8513499 -242174355 - L1PA16 LINE L1 -1 6165 5706 2145 147 0 3 chr2 8513516 8513823 -242174031 + AluSx SINE Alu 1 306 -6 515 242 204 8 chr2 8513984 8514224 -242173630 - L1ME3A LINE L1 -219 5951 5665 1898 185 0 0 chr2 8515552 8515854 -242172000 + AluJb SINE Alu 6 307 -5 2295 100 0 38 chr2 8515909 8516229 -242171625 + AluSq SINE Alu 1 308 -5 189 74 0 0 chr2 8516255 8516282 -242171572 + (CA)n Simple_repeat Simple_repeat 2 28 0 1121 158 30 0 chr2 8516620 8516823 -242171031 + MER2 DNA MER2_type 3 211 -134 1792 141 11 0 chr2 8516833 8517096 -242170758 - AluJb SINE Alu -5 307 42 186 43 0 0 chr2 8517889 8517912 -242169942 + (A)n Simple_repeat Simple_repeat 1 23 0 284 152 0 0 chr2 8517933 8517979 -242169875 - L2 LINE L2 0 3313 3268 214 278 178 0 chr2 8518842 8518932 -242168922 - L2 LINE L2 -1 3312 3207 2076 128 0 16 chr2 8519245 8519550 -242168304 - AluSx SINE Alu -12 300 1 28 0 0 0 chr2 8519907 8519935 -242167919 + AT_rich Low_complexity Low_complexity 1 28 0 783 133 0 0 chr2 8519935 8520040 -242167814 - FLAM_C SINE Alu -25 118 14 1297 266 64 21 chr2 8520062 8520498 -242167356 - MLT1F LTR MaLR 0 542 88 1062 182 9 78 chr2 8520498 8520729 -242167125 - AluJo SINE Alu -22 290 76 1930 203 19 7 chr2 8520739 8521158 -242166696 - L1MB4 LINE L1 -4 6176 5753 245 293 0 40 chr2 8521159 8521258 -242166596 - MLT1F LTR MaLR -444 98 4 237 337 105 0 chr2 8521286 8521381 -242166473 + L2 LINE L2 3186 3290 -23 286 197 15 45 chr2 8521543 8521609 -242166245 - MIR3 SINE MIR -18 190 127 547 218 0 8 chr2 8521619 8521743 -242166111 - MLT1C LTR MaLR -8 459 337 942 194 90 18 chr2 8521769 8522067 -242165787 - MLT1C LTR MaLR -155 412 85 257 189 0 0 chr2 8522084 8522137 -242165717 - Alu SINE Alu 0 308 256 204 313 109 0 chr2 8522719 8522847 -242165007 - L2 LINE L2 -274 2998 2857 889 214 92 56 chr2 8523433 8523792 -242164062 - L1MD2 LINE L1 -1 6358 5987 180 0 0 0 chr2 8523800 8523820 -242164034 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 401 24 0 176 chr2 8523820 8523858 -242163996 - MER41A LTR ERV1 -89 465 448 2220 94 37 13 chr2 8523858 8524157 -242163697 + AluSx SINE Alu 3 308 -4 401 24 0 176 chr2 8524157 8524198 -242163656 - MER41A LTR ERV1 -106 448 401 2089 206 20 15 chr2 8524203 8524660 -242163194 - L1MD2 LINE L1 -465 5894 5436 28 0 0 0 chr2 8526672 8526700 -242161154 + GC_rich Low_complexity Low_complexity 1 28 0 245 197 15 15 chr2 8527181 8527247 -242160607 + (CCG)n Simple_repeat Simple_repeat 3 68 0 30 97 0 0 chr2 8527269 8527362 -242160492 + GC_rich Low_complexity Low_complexity 1 93 0 183 108 216 0 chr2 8527605 8527642 -242160212 + MIR SINE MIR 210 254 -8 856 115 122 22 chr2 8527789 8527928 -242159926 - AluJb SINE Alu -159 153 1 3289 200 33 26 chr2 8528242 8528839 -242159015 + MER44D DNA MER2_type 1 477 -2010 1927 153 27 0 chr2 8528839 8529139 -242158715 + AluJb SINE Alu 1 308 -4 3289 200 33 26 chr2 8529139 8529261 -242158593 + MER44D DNA MER2_type 477 597 -8 981 192 52 5 chr2 8529460 8529653 -242158201 + AluJb SINE Alu 96 297 -15 247 240 93 0 chr2 8529803 8529878 -242157976 + MIR SINE MIR 113 194 -68 586 259 58 0 chr2 8530170 8530344 -242157510 + L1ME LINE L1 3850 4033 -2113 2510 80 0 0 chr2 8530593 8530893 -242156961 - AluY SINE Alu -11 300 1 418 121 0 0 chr2 8530894 8530960 -242156894 - MSTC LTR MaLR -66 362 297 343 108 15 62 chr2 8530941 8531006 -242156848 - MSTC LTR MaLR -366 62 1 * 426 315 70 38 chr2 8531032 8531195 -242156659 + L1ME4a LINE L1 5696 5869 -252 2159 97 34 27 chr2 8531195 8531493 -242156361 - AluSq SINE Alu -13 300 1 426 315 70 38 chr2 8531493 8531542 -242156312 + L1ME4a LINE L1 5869 5915 -206 2331 97 7 3 chr2 8532075 8532384 -242155470 - AluSg SINE Alu 0 310 1 277 282 42 6 chr2 8532386 8532550 -242155304 - LTR16C LTR ERVL -50 428 271 320 311 29 10 chr2 8532689 8532792 -242155062 + L1ME LINE L1 4960 5064 -1082 546 288 55 20 chr2 8532838 8533176 -242154678 + L1ME LINE L1 5293 5645 -476 2125 125 0 3 chr2 8533322 8533610 -242154244 - AluSx SINE Alu -25 287 1 898 82 0 0 chr2 8533619 8533729 -242154125 - AluSg/x SINE Alu -5 304 195 2744 26 0 3 chr2 8534266 8534571 -242153283 + AluY SINE Alu 1 304 -7 2259 89 43 6 chr2 8534574 8534924 -242152930 + L1MA3 LINE L1 5943 6305 0 236 204 204 19 chr2 8535544 8535652 -242152202 - MER3 DNA MER1_type 0 209 82 883 149 105 88 chr2 8535947 8536242 -242151612 + MER58D DNA MER1_type 4 303 -83 195 42 0 0 chr2 8536370 8536394 -242151460 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2578 47 3 3 chr2 8536617 8536918 -242150936 - AluY SINE Alu -10 301 1 1793 146 30 4 chr2 8536986 8537253 -242150601 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 8537595 8537617 -242150237 + AT_rich Low_complexity Low_complexity 1 22 0 211 305 211 21 chr2 8539319 8539414 -242148440 - L2 LINE L2 -5 3267 3155 288 253 64 56 chr2 8539417 8539586 -242148268 - MIR SINE MIR -62 146 19 241 309 44 69 chr2 8540353 8540557 -242147297 + MIR3 SINE MIR 10 208 0 268 270 63 56 chr2 8540978 8541104 -242146750 - MIR3 SINE MIR -67 141 15 364 271 27 38 chr2 8541967 8542100 -242145754 + MIR SINE MIR 50 179 -59 271 246 16 0 chr2 8542301 8542362 -242145492 + L2 LINE L2 3208 3269 -3 2502 53 0 0 chr2 8543099 8543407 -242144447 - AluY SINE Alu 0 308 1 1634 173 30 23 chr2 8544017 8544317 -242143537 + AluSg SINE Alu 1 302 -8 231 236 14 42 chr2 8545026 8545098 -242142756 + MIR SINE MIR 37 106 -102 464 239 29 51 chr2 8545757 8545895 -242141959 + L2 LINE L2 3167 3301 -12 237 241 0 17 chr2 8545843 8545901 -242141953 + MIR SINE MIR 206 262 0 * 183 320 77 13 chr2 8546064 8546142 -242141712 + MIR SINE MIR 31 113 -95 1697 145 54 30 chr2 8546287 8546584 -242141270 - AluJb SINE Alu -8 304 1 1591 192 24 3 chr2 8546844 8547135 -242140719 - AluJo SINE Alu -15 297 1 328 305 250 6 chr2 8547572 8547736 -242140118 + MIR SINE MIR 47 250 -12 1887 113 8 0 chr2 8547969 8548226 -242139628 - AluSx SINE Alu -53 259 1 466 272 63 19 chr2 8548341 8548499 -242139355 - MLT1J2 LTR MaLR -284 166 2 545 247 97 53 chr2 8548499 8548726 -242139128 + L2 LINE L2 3045 3281 -32 183 80 0 0 chr2 8549064 8549089 -242138765 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 22 88 0 0 chr2 8549236 8549293 -242138561 + AT_rich Low_complexity Low_complexity 1 57 0 313 242 57 117 chr2 8549301 8549397 -242138457 + L1MC5 LINE L1 7688 7788 -173 2067 120 0 46 chr2 8549397 8549688 -242138166 + AluSq SINE Alu 5 281 -32 231 36 0 0 chr2 8549688 8549716 -242138138 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2067 120 0 46 chr2 8549716 8549748 -242138106 + AluSq SINE Alu 281 313 0 313 242 57 117 chr2 8549748 8549915 -242137939 + L1MC5 LINE L1 7788 7935 -26 372 343 12 58 chr2 8550241 8550357 -242137497 - MIR3 SINE MIR -14 194 87 2277 115 3 10 chr2 8550357 8550669 -242137185 + AluSx SINE Alu 1 310 -2 372 343 12 58 chr2 8550669 8550724 -242137130 - MIR3 SINE MIR -121 87 31 1895 150 20 3 chr2 8551086 8551380 -242136474 - AluJb SINE Alu -13 299 1 442 316 102 45 chr2 8551398 8551642 -242136212 - MIR SINE MIR -4 258 1 213 108 0 0 chr2 8552147 8552184 -242135670 + (CA)n Simple_repeat Simple_repeat 1 37 0 2098 205 75 0 chr2 8552318 8552801 -242135053 + L1MB7 LINE L1 5657 6175 -9 341 253 175 32 chr2 8553022 8553176 -242134678 + MIR SINE MIR 27 202 -60 512 247 26 74 chr2 8553571 8553761 -242134093 - MIR SINE MIR -76 186 6 707 206 65 35 chr2 8553865 8554035 -242133819 - MER45A DNA AcHobo 0 178 4 522 103 0 23 chr2 8554699 8554786 -242133068 + MLT1C LTR MaLR 3 87 -380 295 137 0 0 chr2 8554999 8555050 -242132804 + Alu SINE Alu 246 296 -5 286 279 51 0 chr2 8556931 8557010 -242130844 - MIR SINE MIR -84 178 96 275 293 49 24 chr2 8558150 8558273 -242129581 + MIR SINE MIR 86 211 -51 822 133 0 8 chr2 8558817 8558937 -242128917 - FLAM_A SINE Alu -12 121 3 546 237 201 16 chr2 8559179 8559373 -242128481 - MIR SINE MIR -5 257 28 1868 175 3 0 chr2 8560700 8561015 -242126839 + AluSx SINE Alu 1 316 0 2363 98 0 0 chr2 8561808 8562104 -242125750 + AluSc SINE Alu 1 296 -13 633 275 55 22 chr2 8562170 8562352 -242125502 - MIR SINE MIR -1 261 74 355 267 48 0 chr2 8563213 8563318 -242124536 + MIR SINE MIR 56 165 -97 412 259 6 6 chr2 8563803 8563929 -242123925 - MIR SINE MIR -66 142 46 479 241 99 0 chr2 8564605 8564746 -242123108 + MLT1F1 LTR MaLR 411 565 -2 2366 94 0 3 chr2 8564901 8565199 -242122655 + AluSx SINE Alu 1 297 -15 2233 107 23 3 chr2 8565972 8566271 -242121583 + AluSp SINE Alu 1 305 -8 261 83 0 0 chr2 8566271 8566307 -242121547 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 690 253 116 58 chr2 8567477 8567927 -242119927 + MLT1J LTR MaLR 28 503 -8 387 329 36 7 chr2 8567980 8568117 -242119737 - MIR3 SINE MIR -10 198 58 460 230 112 37 chr2 8568129 8568169 -242119685 + LTR33 LTR ERVL 16 52 -469 2046 109 31 7 chr2 8568169 8568462 -242119392 - AluSg1 SINE Alu -9 300 1 460 230 112 37 chr2 8568462 8568582 -242119272 + LTR33 LTR ERVL 52 188 -333 518 191 118 7 chr2 8569333 8569469 -242118385 - MER63 DNA MER1_type -53 783 7 217 333 53 0 chr2 8569537 8569612 -242118242 - MER5A DNA MER1_type -1 188 110 614 215 0 6 chr2 8569870 8570042 -242117812 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 1023 81 0 0 chr2 8570157 8570281 -242117573 + AluSg/x SINE Alu 182 305 -7 322 218 24 135 chr2 8570464 8570634 -242117220 + LTR67 LTR ERVL 5 155 -402 462 246 42 7 chr2 8570794 8570936 -242116918 + LTR67 LTR ERVL 386 532 -25 2284 108 0 10 chr2 8571114 8571419 -242116435 + AluSg SINE Alu 3 304 -6 330 286 40 32 chr2 8571432 8571558 -242116296 - MER5A DNA MER1_type -19 170 44 329 234 175 44 chr2 8571436 8571573 -242116281 + MER5A DNA MER1_type 35 189 0 * 275 199 109 33 chr2 8571915 8572046 -242115808 - LTR33A LTR ERVL -287 234 69 227 306 122 0 chr2 8572165 8572263 -242115591 - MIR SINE MIR -69 139 30 412 230 11 46 chr2 8572693 8572780 -242115074 - MIR3 SINE MIR -54 154 71 598 111 0 0 chr2 8573114 8573204 -242114650 - MER41A LTR ERV1 0 554 465 4603 91 11 20 chr2 8574283 8574924 -242112930 - MER41B LTR ERV1 0 635 1 303 225 42 0 chr2 8575083 8575154 -242112700 + MER105 DNA DNA 1 74 -130 257 246 48 16 chr2 8575179 8575305 -242112549 + (CATA)n Simple_repeat Simple_repeat 2 131 0 680 269 52 70 chr2 8575308 8575646 -242112208 - LTR16A LTR ERVL -48 402 70 3266 160 17 91 chr2 8575646 8576391 -242111463 + LTR8 LTR ERV1 1 690 -1 680 269 52 70 chr2 8576391 8576439 -242111415 - LTR16A LTR ERVL -380 70 23 2444 193 77 50 chr2 8576462 8576821 -242111033 + L1ME1 LINE L1 4614 4962 -1184 748 157 0 25 chr2 8576821 8576966 -242110888 - FLAM_C SINE Alu 0 142 1 2444 193 77 50 chr2 8576966 8577366 -242110488 + L1ME1 LINE L1 4962 5396 -750 1712 199 10 16 chr2 8577360 8577746 -242110108 + L1ME1 LINE L1 5615 5998 -168 * 2172 130 0 3 chr2 8577859 8578160 -242109694 + AluSx SINE Alu 1 300 -12 2308 91 10 7 chr2 8578160 8578467 -242109387 + AluSg1 SINE Alu 1 308 -1 1639 188 57 39 chr2 8578621 8579004 -242108850 - MLT1B LTR MaLR 0 390 1 236 245 19 19 chr2 8579046 8579099 -242108755 + MIR SINE MIR 23 75 -133 341 229 73 68 chr2 8579134 8579326 -242108528 + MER117 DNA MER1_type 2 194 -3 2149 129 0 10 chr2 8579573 8579876 -242107978 + AluSx SINE Alu 1 300 -12 342 234 53 0 chr2 8579944 8580038 -242107816 - MER20 DNA MER1_type -57 162 64 400 173 146 45 chr2 8580399 8580509 -242107345 + MIR SINE MIR 29 149 -113 288 212 8 127 chr2 8580514 8580583 -242107271 + MLT1J LTR MaLR 1 53 -458 1924 156 0 0 chr2 8580583 8580913 -242106941 - AluSx SINE Alu 0 330 1 288 212 8 127 chr2 8580913 8580960 -242106894 + MLT1J LTR MaLR 53 104 -407 536 254 110 76 chr2 8580974 8581265 -242106589 + MLT1J LTR MaLR 205 505 -6 23 0 0 0 chr2 8581405 8581428 -242106426 + AT_rich Low_complexity Low_complexity 1 23 0 185 288 125 0 chr2 8581772 8581852 -242106002 - MIR SINE MIR -52 210 121 534 305 6 0 chr2 8581987 8582154 -242105700 - MER119 DNA MER1_type -290 293 126 23 33 0 0 chr2 8582261 8582291 -242105563 + AT_rich Low_complexity Low_complexity 1 30 0 676 152 27 18 chr2 8582291 8582403 -242105451 - FLAM_A SINE Alu -18 124 12 313 247 25 0 chr2 8582412 8582493 -242105361 - MER119 DNA MER1_type -496 87 5 2303 105 0 3 chr2 8582736 8583041 -242104813 - AluSq SINE Alu -9 304 1 524 216 0 8 chr2 8583113 8583247 -242104607 + (TG)n Simple_repeat Simple_repeat 2 134 0 1004 187 44 4 chr2 8583391 8583642 -242104212 + L1 LINE L1 4247 4507 -1639 422 314 24 8 chr2 8583720 8583844 -242104010 + HAL1 LINE L1 1255 1380 -1127 2201 126 0 3 chr2 8583849 8584150 -242103704 + AluSx SINE Alu 3 302 -10 427 169 79 11 chr2 8584253 8584342 -242103512 - LTR54 LTR ERV1 -373 137 43 341 163 174 0 chr2 8584343 8584435 -242103419 + HAL1 LINE L1 2097 2204 -303 472 214 0 0 chr2 8584454 8584543 -242103311 - LTR49 LTR ERV1 0 595 507 534 138 0 0 chr2 8584553 8584633 -242103221 + FLAM SINE Alu 42 121 -22 2106 121 29 10 chr2 8584657 8584963 -242102891 - AluSx SINE Alu 0 312 1 708 264 110 35 chr2 8585006 8585113 -242102741 - LTR48B LTR ERV1 -150 494 397 3500 128 56 0 chr2 8585113 8585612 -242102242 - MER1A DNA MER1_type 0 527 1 708 264 110 35 chr2 8585612 8585822 -242102032 - LTR48B LTR ERV1 -247 397 153 4550 57 37 11 chr2 8585822 8586838 -242101016 - MER11A LTR ERVK 0 1266 1 443 75 0 50 chr2 8586838 8586917 -242100937 - LTR48B LTR ERV1 -486 158 84 365 226 34 124 chr2 8587076 8587168 -242100686 + HAL1 LINE L1 2260 2359 -148 2063 155 0 0 chr2 8587168 8587458 -242100396 + AluJb SINE Alu 1 290 -22 365 226 34 124 chr2 8587458 8587631 -242100223 + HAL1 LINE L1 2359 2501 -6 2246 131 3 0 chr2 8587692 8587997 -242099857 + AluSx SINE Alu 1 306 -6 1093 261 65 21 chr2 8588137 8588462 -242099392 + MER58B DNA MER1_type 1 339 -2 463 325 33 0 chr2 8588495 8588646 -242099208 + MIR SINE MIR 51 206 -56 2527 80 0 0 chr2 8588997 8589299 -242098555 + AluSq SINE Alu 1 302 -11 242 254 58 56 chr2 8590043 8590215 -242097639 - MIR SINE MIR -62 146 17 354 23 0 0 chr2 8590822 8590865 -242096989 + (CA)n Simple_repeat Simple_repeat 2 44 0 423 279 11 49 chr2 8591926 8592109 -242095745 + (TATG)n Simple_repeat Simple_repeat 3 178 0 2127 135 7 0 chr2 8592731 8593035 -242094819 + AluSx SINE Alu 1 306 -6 709 265 109 73 chr2 8593071 8593512 -242094342 + L1MC4 LINE L1 7444 7900 -142 534 295 51 6 chr2 8593848 8594004 -242093850 + MIR SINE MIR 26 188 -74 300 239 0 28 chr2 8594067 8594149 -242093705 - MER5A DNA MER1_type -23 166 76 426 311 48 6 chr2 8594179 8594346 -242093508 + L2 LINE L2 2881 3054 -218 389 266 42 63 chr2 8594484 8594627 -242093227 - MIR SINE MIR -102 160 21 2348 93 7 3 chr2 8594714 8595016 -242092838 - AluSx SINE Alu -9 303 1 198 283 19 0 chr2 8596101 8596154 -242091700 + L2 LINE L2 2156 2209 -1105 2414 86 0 16 chr2 8596177 8596491 -242091363 + AluSx SINE Alu 1 309 -3 509 21 62 10 chr2 8596574 8596670 -242091184 + (CA)n Simple_repeat Simple_repeat 1 101 0 3857 96 26 100 chr2 8596670 8597387 -242090467 - MER4A LTR ERV1 0 664 1 240 35 0 0 chr2 8597387 8597416 -242090438 + (CA)n Simple_repeat Simple_repeat 2 30 0 330 313 104 21 chr2 8597662 8597806 -242090048 + MIR SINE MIR 22 177 -85 592 254 53 30 chr2 8597927 8598096 -242089758 + MIR SINE MIR 68 240 -22 183 300 169 53 chr2 8598755 8599092 -242088762 + L2 LINE L2 2213 2588 -726 238 191 0 0 chr2 8599130 8599177 -242088677 + MER58B DNA MER1_type 295 341 0 245 303 134 39 chr2 8599608 8599915 -242087939 - L1ME3A LINE L1 -223 5947 5612 255 247 92 53 chr2 8600001 8600163 -242087691 - L1ME3A LINE L1 -704 5452 5319 277 171 43 29 chr2 8600263 8600333 -242087521 - Charlie4 DNA MER1_type -1879 82 12 27 29 0 0 chr2 8600404 8600438 -242087416 + AT_rich Low_complexity Low_complexity 1 34 0 2043 103 19 39 chr2 8600974 8601145 -242086709 - AluJb SINE Alu -8 304 140 2386 108 0 0 chr2 8601145 8601452 -242086402 - AluSx SINE Alu -5 307 1 2043 103 19 39 chr2 8601452 8601590 -242086264 - AluJb SINE Alu -172 140 1 399 278 202 15 chr2 8601605 8601803 -242086051 - MIR SINE MIR -8 254 20 2468 75 0 3 chr2 8602299 8602605 -242085249 - AluY SINE Alu -6 305 1 201 264 99 11 chr2 8602652 8602743 -242085111 - MIR SINE MIR -12 250 152 358 202 58 18 chr2 8603309 8603437 -242084417 + MIR3 SINE MIR 60 196 -12 360 296 139 12 chr2 8604011 8604183 -242083671 + MIR3 SINE MIR 15 208 0 4596 173 54 22 chr2 8604401 8606001 -242081853 - L1MB7 LINE L1 -25 6159 4503 659 143 0 0 chr2 8606001 8606106 -242081748 - AluSg/x SINE Alu 0 309 205 280 156 0 6 chr2 8606106 8606165 -242081689 - Alu SINE Alu -263 40 1 1227 218 29 35 chr2 8606165 8606479 -242081375 - L1MB7 LINE L1 -1664 4482 4169 2292 48 44 24 chr2 8606479 8606773 -242081081 - AluY SINE Alu -5 306 7 1227 218 29 35 chr2 8606773 8606802 -242081052 - L1MB7 LINE L1 -1977 4169 4141 217 306 148 0 chr2 8609014 8609122 -242078732 + L2 LINE L2 3142 3265 -7 239 204 41 0 chr2 8609450 8609499 -242078355 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 544 191 89 64 chr2 8609762 8609919 -242077935 + MER58C DNA MER1_type 43 203 -12 221 250 0 0 chr2 8611177 8611221 -242076633 + L3 LINE CR1 1532 1575 -2 218 308 63 25 chr2 8612235 8612368 -242075486 - MIR SINE MIR -65 143 18 502 326 39 11 chr2 8617218 8617396 -242070458 + L2 LINE L2 3130 3312 -1 309 283 18 53 chr2 8618276 8618389 -242069465 + MIR SINE MIR 12 120 -142 * 672 216 88 66 chr2 8618388 8618521 -242069333 - MIR SINE MIR -5 257 115 2460 96 0 0 chr2 8618521 8618824 -242069030 + AluSx SINE Alu 1 303 -9 672 216 88 66 chr2 8618824 8618917 -242068937 - MIR SINE MIR -147 115 26 276 322 67 31 chr2 8618865 8619089 -242068765 + MIR SINE MIR 7 242 -20 * 715 231 15 5 chr2 8620589 8620788 -242067066 + MER20 DNA MER1_type 19 219 0 21 0 0 0 chr2 8621319 8621340 -242066514 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 0 0 chr2 8621358 8621396 -242066458 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1641 146 4 4 chr2 8622012 8622266 -242065588 + AluJo SINE Alu 1 254 -58 216 359 35 78 chr2 8622335 8622416 -242065438 - L2 LINE L2 -538 2776 2693 2413 90 3 13 chr2 8622416 8622728 -242065126 + AluSg SINE Alu 1 309 -1 216 359 35 78 chr2 8622728 8622877 -242064977 - L2 LINE L2 -621 2693 2556 1229 160 9 5 chr2 8622912 8623124 -242064730 - MER4E LTR ERV1 0 779 567 * 1718 141 63 30 chr2 8623118 8623451 -242064403 - MER4B LTR ERV1 -266 344 1 268 158 368 11 chr2 8623456 8623551 -242064303 - MIR SINE MIR -66 196 68 529 193 28 0 chr2 8624583 8624692 -242063162 - MIR SINE MIR -129 133 22 2166 123 41 0 chr2 8625813 8626155 -242061699 + THE1B LTR MaLR 2 357 -7 264 273 10 30 chr2 8626220 8626319 -242061535 + MLT1K LTR MaLR 492 588 0 241 263 14 111 chr2 8627049 8627106 -242060748 + MIR SINE MIR 11 56 -152 1676 192 0 10 chr2 8627106 8627414 -242060440 - AluJo SINE Alu -7 305 1 241 263 14 111 chr2 8627414 8627477 -242060377 + MIR SINE MIR 56 124 -84 872 159 0 0 chr2 8627644 8627776 -242060078 + AluJo SINE Alu 2 133 -169 2392 89 86 9 chr2 8627790 8628128 -242059726 + THE1B LTR MaLR 1 364 0 858 160 0 75 chr2 8628130 8628276 -242059578 + AluJo SINE Alu 140 261 -174 1079 73 11 17 chr2 8628276 8628454 -242059400 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 858 160 0 75 chr2 8628454 8628617 -242059237 + AluJo SINE Alu 261 435 0 255 266 152 0 chr2 8629860 8629939 -242057915 + MIR SINE MIR 57 147 -61 2043 139 3 19 chr2 8629958 8630268 -242057586 + AluSx SINE Alu 1 305 -7 194 244 24 0 chr2 8630277 8630318 -242057536 + MIR SINE MIR 218 259 -3 2313 71 3 3 chr2 8630872 8631187 -242056667 + AluY SINE Alu 1 315 0 1935 146 3 54 chr2 8631194 8631510 -242056344 + AluSx SINE Alu 1 300 -12 2382 105 0 3 chr2 8631754 8632067 -242055787 + AluSx SINE Alu 1 312 0 1576 175 91 4 chr2 8632123 8632397 -242055457 + AluJb SINE Alu 1 298 -14 190 333 63 16 chr2 8633170 8633296 -242054558 + MIR SINE MIR 120 251 -11 242 71 0 24 chr2 8633298 8633340 -242054514 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 459 258 42 72 chr2 8633648 8633815 -242054039 - MER91B DNA MER1_type -11 179 18 1886 158 14 0 chr2 8633860 8634152 -242053702 + AluJo SINE Alu 1 296 -16 436 296 206 7 chr2 8634700 8635001 -242052853 + L2 LINE L2 2912 3272 0 459 316 56 71 chr2 8635083 8635476 -242052378 - L2 LINE L2 -508 2806 2420 2462 73 3 0 chr2 8636832 8637132 -242050722 - AluY SINE Alu -10 301 1 2103 137 20 7 chr2 8637140 8637440 -242050414 - AluJb SINE Alu -8 304 1 206 265 20 0 chr2 8638235 8638284 -242049570 + L2 LINE L2 3194 3243 -29 639 39 0 0 chr2 8638666 8638744 -242049110 + (TC)n Simple_repeat Simple_repeat 1 78 0 4946 108 3 3 chr2 8638995 8639682 -242048172 - L1PA10 LINE L1 -1 6167 5481 2150 128 10 6 chr2 8639682 8639994 -242047860 - AluSp SINE Alu 0 313 1 2091 131 3 10 chr2 8640082 8640388 -242047466 - AluSq SINE Alu -7 306 3 245 285 61 144 chr2 8640432 8640695 -242047159 - MIR SINE MIR -2 260 20 1746 157 51 40 chr2 8640765 8640824 -242047030 - L1MB8 LINE L1 -9 6169 6112 1671 194 3 7 chr2 8640824 8641134 -242046720 + AluJo SINE Alu 1 309 -3 1746 157 51 40 chr2 8641134 8641449 -242046405 - L1MB8 LINE L1 -66 6112 5791 2510 169 38 0 chr2 8641450 8641893 -242045961 + MLT1C LTR MaLR 3 462 -5 2852 149 45 79 chr2 8641893 8642208 -242045646 - L1MB8 LINE L1 -401 5783 5459 2263 117 42 28 chr2 8642208 8642419 -242045435 - THE1B LTR MaLR 0 364 144 1860 140 0 13 chr2 8642419 8642727 -242045127 + AluSc SINE Alu 1 304 -5 2263 117 42 28 chr2 8642727 8642874 -242044980 - THE1B LTR MaLR -220 144 1 2852 149 45 79 chr2 8642874 8643114 -242044740 - L1MB8 LINE L1 -725 5459 5262 2120 114 0 16 chr2 8643114 8643431 -242044423 + AluJb SINE Alu 1 312 0 2852 149 45 79 chr2 8643431 8643560 -242044294 - L1MB8 LINE L1 -922 5262 5130 281 300 9 55 chr2 8643587 8643697 -242044157 + L2 LINE L2 2642 2746 -568 574 40 0 0 chr2 8643713 8643787 -242044067 + AluJb SINE Alu 209 282 -30 281 26 0 26 chr2 8643790 8643829 -242044025 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 991 284 81 45 chr2 8643861 8644344 -242043510 + L2 LINE L2 2812 3311 -2 442 267 240 0 chr2 8644550 8644696 -242043158 - MER5A DNA MER1_type 0 189 9 328 266 55 37 chr2 8645042 8645151 -242042703 - L2 LINE L2 -4 3309 3199 240 377 51 0 chr2 8645519 8645657 -242042197 - L2 LINE L2 -238 3034 2890 1260 204 96 16 chr2 8645767 8646081 -242041773 - MER58B DNA MER1_type -2 339 1 2615 177 33 124 chr2 8646643 8646976 -242040878 + MER63C DNA MER1_type 1 226 -834 2739 13 3 0 chr2 8646976 8647289 -242040565 + AluYb8 SINE Alu 1 314 -4 2615 177 33 124 chr2 8647289 8647718 -242040136 + MER63C DNA MER1_type 226 693 -237 344 256 13 0 chr2 8647724 8647802 -242040052 + MER63C DNA MER1_type 853 931 0 2480 58 0 0 chr2 8648203 8648513 -242039341 - AluY SINE Alu -1 310 1 228 107 18 36 chr2 8649069 8649125 -242038729 + (TTCTCC)n Simple_repeat Simple_repeat 5 59 0 21 0 0 0 chr2 8649125 8649146 -242038708 + AT_rich Low_complexity Low_complexity 1 21 0 1081 183 47 21 chr2 8649146 8649381 -242038473 - MER46C DNA MER2_type 0 338 98 212 245 0 0 chr2 8650729 8650778 -242037076 + CT-rich Low_complexity Low_complexity 3 51 0 201 304 52 61 chr2 8650923 8651038 -242036816 + MIR SINE MIR 23 136 -126 25 75 0 0 chr2 8651325 8651378 -242036476 + GC_rich Low_complexity Low_complexity 1 53 0 1529 77 5 0 chr2 8651534 8651729 -242036125 + AluSp SINE Alu 104 299 -14 214 200 0 0 chr2 8651927 8651967 -242035887 + T-rich Low_complexity Low_complexity 1 40 0 249 382 49 16 chr2 8652698 8652821 -242035033 - L2 LINE L2 -21 3251 3125 197 254 127 0 chr2 8653123 8653178 -242034676 + L2 LINE L2 2433 2494 -820 404 130 101 0 chr2 8653257 8653326 -242034528 - Charlie5 DNA MER1_type -2527 85 10 265 180 20 0 chr2 8653347 8653397 -242034457 + MER5A DNA MER1_type 42 92 -97 443 265 119 13 chr2 8653463 8653614 -242034240 - MER5B DNA MER1_type -11 167 1 * 1059 263 95 39 chr2 8653614 8654246 -242033608 - L2 LINE L2 -141 3172 2496 2160 108 0 6 chr2 8654783 8655097 -242032757 - AluSx SINE Alu 0 312 1 186 351 52 0 chr2 8655241 8655318 -242032536 - L2 LINE L2 -1 3312 3232 189 0 0 0 chr2 8655335 8655356 -242032498 + (A)n Simple_repeat Simple_repeat 1 21 0 726 202 74 15 chr2 8655429 8655543 -242032311 - Charlie4 DNA MER1_type -7 1954 1848 1415 166 109 22 chr2 8655543 8655863 -242031991 - MER7A DNA MER2_type 0 346 1 726 202 74 15 chr2 8655863 8655951 -242031903 - Charlie4 DNA MER1_type -113 1848 1740 180 0 0 0 chr2 8705955 8705975 -241981879 + (A)n Simple_repeat Simple_repeat 1 20 0 1760 146 42 17 chr2 8706605 8706892 -241980962 - AluJb SINE Alu -18 294 1 291 253 30 64 chr2 8707128 8707229 -241980625 + MIR SINE MIR 9 107 -101 2084 170 15 15 chr2 8707229 8707618 -241980236 + MLT1B LTR MaLR 1 389 -1 291 253 30 64 chr2 8707618 8707634 -241980220 + MIR SINE MIR 107 122 -86 561 221 69 35 chr2 8707783 8707928 -241979926 + MLT1E3 LTR MaLR 473 622 -2 2311 91 3 0 chr2 8708375 8708661 -241979193 + AluSp SINE Alu 1 287 -26 1669 175 27 3 chr2 8709633 8709925 -241977929 - AluJo SINE Alu 0 312 14 198 0 0 0 chr2 8710033 8710055 -241977799 + (T)n Simple_repeat Simple_repeat 1 22 0 2362 102 0 3 chr2 8710196 8710501 -241977353 - AluSg SINE Alu -6 304 1 209 228 0 35 chr2 8711181 8711238 -241976616 + C-rich Low_complexity Low_complexity 2 56 0 2029 125 10 29 chr2 8711507 8711818 -241976036 + AluSq SINE Alu 1 305 -8 223 253 46 46 chr2 8712101 8712188 -241975666 + L2 LINE L2 3167 3253 -19 491 249 166 16 chr2 8712212 8712405 -241975449 + MIR SINE MIR 4 225 -37 2323 113 0 0 chr2 8712507 8712808 -241975046 + AluSx SINE Alu 1 301 -11 1424 140 0 18 chr2 8713370 8713592 -241974262 + AluSg/x SINE Alu 74 291 -19 627 169 115 8 chr2 8713595 8713725 -241974129 - FAM SINE Alu -34 151 8 2271 149 95 2 chr2 8713735 8714158 -241973696 - L1MC1 LINE L1 -179 6154 5693 2418 93 10 0 chr2 8714162 8714472 -241973382 + AluSq SINE Alu 1 313 0 1723 124 30 65 chr2 8714475 8714647 -241973207 - L1MC1 LINE L1 -752 5592 5436 698 191 0 16 chr2 8714647 8714773 -241973081 - FLAM_A SINE Alu -9 124 1 1723 124 30 65 chr2 8714773 8714939 -241972915 - L1MC1 LINE L1 -908 5436 5266 28 0 0 0 chr2 8714943 8714971 -241972883 + AT_rich Low_complexity Low_complexity 1 28 0 857 137 0 8 chr2 8714971 8715095 -241972759 - AluJb SINE Alu -189 123 1 251 245 0 0 chr2 8715095 8715164 -241972690 - L1MC1 LINE L1 -870 5276 5208 1806 132 0 28 chr2 8715202 8715490 -241972364 + AluSx SINE Alu 31 310 -2 385 287 131 48 chr2 8715499 8715966 -241971888 + MLT1L LTR MaLR 6 615 0 832 247 133 7 chr2 8715969 8716277 -241971577 + HAL1 LINE L1 1423 1769 -738 189 0 0 0 chr2 8716964 8716985 -241970869 + (A)n Simple_repeat Simple_repeat 1 21 0 2044 131 0 3 chr2 8717459 8717781 -241970073 + AluSx SINE Alu 1 321 0 2011 128 6 39 chr2 8717889 8718201 -241969653 + AluSx SINE Alu 1 302 -10 929 164 30 0 chr2 8718517 8718682 -241969172 - AluJb SINE Alu -14 298 129 282 270 33 53 chr2 8719418 8719570 -241968284 - MER5B DNA MER1_type 0 178 30 2196 96 0 3 chr2 8720085 8720378 -241967476 - AluSx SINE Alu 0 312 21 811 166 13 19 chr2 8721057 8721081 -241966773 - AluJb SINE Alu -20 292 269 1767 170 70 23 chr2 8721081 8721511 -241966343 - LTR7 LTR ERV1 0 450 1 811 166 13 19 chr2 8721511 8721643 -241966211 - AluJb SINE Alu -43 269 137 292 80 40 40 chr2 8722029 8722079 -241965775 - L1MC5 LINE L1 -172 7789 7740 202 250 198 10 chr2 8722167 8722263 -241965591 - MIR SINE MIR -112 150 37 244 295 139 29 chr2 8724027 8724308 -241963546 + L1ME4a LINE L1 5282 5593 -528 2303 104 16 0 chr2 8724504 8724812 -241963042 - AluSq SINE Alu 0 313 1 521 265 56 38 chr2 8724884 8724946 -241962908 + L1ME4a LINE L1 5812 5871 -250 1336 162 116 8 chr2 8724946 8725205 -241962649 + AluJo SINE Alu 1 287 -25 521 265 56 38 chr2 8725205 8725429 -241962425 + L1ME4a LINE L1 5871 6103 -18 447 275 111 19 chr2 8725497 8725704 -241962150 - MIR SINE MIR -17 245 20 685 217 0 8 chr2 8726571 8726700 -241961154 + MER8 DNA MER2_type 112 239 0 2256 94 13 3 chr2 8726733 8727032 -241960822 - AluSx SINE Alu -8 304 3 497 283 53 0 chr2 8727211 8727363 -241960491 - MIR SINE MIR -84 178 19 955 158 22 27 chr2 8727963 8728146 -241959708 - AluJo SINE Alu -24 288 107 938 276 79 3 chr2 8729707 8730076 -241957778 + L1ME1 LINE L1 5550 5946 -220 1865 113 68 0 chr2 8730078 8730343 -241957511 + AluSx SINE Alu 1 283 -29 201 190 139 63 chr2 8731122 8731201 -241956653 - MIR3 SINE MIR -22 186 102 2203 120 0 3 chr2 8731252 8731552 -241956302 + AluSq SINE Alu 1 299 -14 1831 154 0 34 chr2 8731656 8731954 -241955900 + AluJo SINE Alu 1 288 -24 414 0 0 0 chr2 8732495 8732541 -241955313 + (TG)n Simple_repeat Simple_repeat 1 46 0 1101 175 159 36 chr2 8732566 8732817 -241955037 - AluJo SINE Alu -30 282 1 2456 76 3 0 chr2 8734378 8734682 -241953172 + AluSg SINE Alu 1 305 -5 1637 188 20 10 chr2 8734691 8734984 -241952870 + AluJb SINE Alu 1 296 -16 2155 109 3 16 chr2 8734984 8735296 -241952558 + AluSc SINE Alu 1 308 -1 2150 112 14 3 chr2 8735305 8735601 -241952253 + AluSc SINE Alu 2 300 -9 22 0 0 0 chr2 8736240 8736262 -241951592 + AT_rich Low_complexity Low_complexity 1 22 0 252 0 0 0 chr2 8736562 8736590 -241951264 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 263 216 49 59 chr2 8736863 8736965 -241950889 + L1MC4a LINE L1 5802 5902 -1906 23 0 0 0 chr2 8738362 8738385 -241949469 + AT_rich Low_complexity Low_complexity 1 23 0 998 133 96 21 chr2 8738407 8738595 -241949259 + Tigger2a DNA MER2_type 1 202 -232 948 172 17 22 chr2 8738595 8738775 -241949079 - AluJo SINE Alu -13 299 121 1205 117 40 85 chr2 8738775 8738941 -241948913 + Tigger2a DNA MER2_type 209 362 -2356 1376 177 89 7 chr2 8738941 8739212 -241948642 + AluJo SINE Alu 1 293 -19 1205 117 40 85 chr2 8739212 8739292 -241948562 + Tigger2a DNA MER2_type 362 444 0 1129 147 0 0 chr2 8739874 8740037 -241947817 + AluSg/x SINE Alu 135 297 -13 2000 134 0 3 chr2 8741234 8741539 -241946315 + AluSx SINE Alu 1 304 0 30 69 0 0 chr2 8741690 8741748 -241946106 + AT_rich Low_complexity Low_complexity 1 58 0 1740 129 4 0 chr2 8741761 8742001 -241945853 + AluSx SINE Alu 1 241 -71 252 0 0 0 chr2 8742004 8742032 -241945822 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 365 261 59 17 chr2 8742976 8743095 -241944759 - L2 LINE L2 0 3313 3190 3349 160 75 60 chr2 8743401 8743888 -241943966 + L1MB7 LINE L1 5378 5856 -328 2165 121 0 3 chr2 8743888 8744186 -241943668 + AluSx SINE Alu 1 297 -15 3349 160 75 60 chr2 8744186 8744410 -241943444 + L1MB7 LINE L1 5856 6075 -109 1905 118 29 4 chr2 8744410 8744689 -241943165 + AluSx SINE Alu 2 287 -25 207 0 0 0 chr2 8744690 8744713 -241943141 + (CA)n Simple_repeat Simple_repeat 2 24 0 3349 160 75 60 chr2 8744713 8744784 -241943070 + L1MB7 LINE L1 6074 6175 -9 315 311 107 0 chr2 8744841 8744944 -241942910 - L3 LINE CR1 -3 1574 1461 309 296 165 11 chr2 8745015 8745191 -241942663 + MIR SINE MIR 2 204 -58 517 290 36 44 chr2 8745314 8745562 -241942292 + L1MC4 LINE L1 7657 7902 -140 2110 138 0 0 chr2 8745675 8745973 -241941881 - AluSx SINE Alu -9 303 6 1060 104 0 0 chr2 8746006 8746140 -241941714 + AluSg SINE Alu 1 134 -176 2219 114 0 0 chr2 8746140 8746438 -241941416 + AluSx SINE Alu 1 298 -14 1501 183 13 50 chr2 8746536 8746837 -241941017 + AluJo SINE Alu 1 290 -22 658 183 0 0 chr2 8746962 8747066 -241940788 - U13 snRNA snRNA 0 104 1 1578 175 7 54 chr2 8747209 8747506 -241940348 - AluJo SINE Alu -29 283 1 2148 130 0 0 chr2 8747629 8747922 -241939932 + AluSg SINE Alu 1 293 -17 2218 110 3 0 chr2 8747987 8748286 -241939568 + AluSc SINE Alu 1 300 -9 236 238 183 55 chr2 8748340 8748504 -241939350 + MLT1J1 LTR MaLR 23 207 -239 291 200 158 11 chr2 8748539 8748634 -241939220 + MLT1J2 LTR MaLR 305 413 -37 2033 131 0 7 chr2 8748807 8749105 -241938749 + AluSc SINE Alu 1 296 -13 1091 138 0 0 chr2 8749105 8749280 -241938574 + AluSg/x SINE Alu 132 306 0 359 257 6 80 chr2 8749306 8749481 -241938373 + L1ME4a LINE L1 5851 6012 -109 26 0 0 0 chr2 8750650 8750676 -241937178 + AT_rich Low_complexity Low_complexity 1 26 0 193 270 0 0 chr2 8751913 8751950 -241935904 - L2 LINE L2 -18 3254 3218 * 417 290 18 38 chr2 8751938 8752094 -241935760 - MIR SINE MIR -62 146 12 2112 87 45 0 chr2 8752171 8752458 -241935396 + AluY SINE Alu 1 300 -11 883 73 0 33 chr2 8752596 8752747 -241935107 + (GGGGA)n Simple_repeat Simple_repeat 4 149 0 2394 72 0 26 chr2 8753830 8754134 -241933720 - AluY SINE Alu -15 296 1 324 312 163 16 chr2 8754451 8754651 -241933203 + MIR SINE MIR 4 230 -32 449 263 85 0 chr2 8754994 8755112 -241932742 + MIR SINE MIR 2 129 -133 1088 265 66 55 chr2 8755290 8755940 -241931914 + L1MC4a LINE L1 5175 5403 -743 2236 124 0 3 chr2 8756000 8756314 -241931540 + AluSq SINE Alu 1 313 0 1984 137 17 3 chr2 8756477 8756777 -241931077 + AluSx SINE Alu 1 304 -8 850 178 8 0 chr2 8756977 8757106 -241930748 + FLAM_C SINE Alu 1 130 -3 1936 140 16 13 chr2 8757408 8757716 -241930138 - AluSx SINE Alu -3 309 1 1927 151 84 6 chr2 8758408 8758765 -241929089 + L1MA4 LINE L1 5915 6299 -1 263 274 0 0 chr2 8758845 8758907 -241928947 + HAL1 LINE L1 578 639 -1868 1862 113 60 0 chr2 8758976 8759242 -241928612 + AluSx SINE Alu 1 282 -30 2178 94 3 7 chr2 8759263 8759560 -241928294 + AluSc SINE Alu 1 296 -13 956 231 16 0 chr2 8759815 8760001 -241927853 + MER5A DNA MER1_type 1 189 0 2208 113 3 3 chr2 8760005 8760307 -241927547 + AluSq SINE Alu 1 302 -11 373 327 47 57 chr2 8760327 8760530 -241927324 + L1ME4a LINE L1 5653 5854 -267 1939 149 0 13 chr2 8760530 8760838 -241927016 + AluJo SINE Alu 1 304 -8 373 327 47 57 chr2 8760838 8760931 -241926923 + L1ME4a LINE L1 5854 5946 -175 1898 129 11 4 chr2 8761431 8761710 -241926144 - AluSc SINE Alu -14 295 15 229 175 0 62 chr2 8761818 8761898 -241925956 + T-rich Low_complexity Low_complexity 3 77 0 248 263 150 0 chr2 8761976 8762056 -241925798 - L2 LINE L2 -6 3307 3216 1768 152 0 61 chr2 8762484 8762813 -241925041 + AluJo SINE Alu 1 309 -3 1647 130 8 16 chr2 8762813 8763066 -241924788 + AluSx SINE Alu 46 296 -16 230 309 32 11 chr2 8763068 8763162 -241924692 - L2 LINE L2 -620 2694 2599 2159 112 0 13 chr2 8763807 8764110 -241923744 + AluSg SINE Alu 1 299 -11 1735 147 51 17 chr2 8764242 8764535 -241923319 - AluJb SINE Alu -9 303 1 2247 117 3 0 chr2 8765153 8765461 -241922393 - AluSx SINE Alu -3 309 1 1994 113 10 52 chr2 8765493 8765802 -241922052 + AluSx SINE Alu 1 296 -16 209 258 371 0 chr2 8765809 8765906 -241921948 - L2 LINE L2 -960 2354 2222 2344 120 78 12 chr2 8766030 8766190 -241921664 - Tigger4(Zombi) DNA MER2_type 0 2731 2583 2441 60 0 0 chr2 8766190 8766474 -241921380 - AluY SINE Alu -27 284 1 2344 120 78 12 chr2 8766474 8766721 -241921133 - Tigger4(Zombi) DNA MER2_type -148 2583 2297 397 134 224 0 chr2 8766723 8766790 -241921064 - Tigger4(Zombi) DNA MER2_type -2647 84 3 226 97 97 97 chr2 8767551 8767623 -241920231 + Charlie2b DNA MER1_type 1365 1436 -1346 2424 89 0 3 chr2 8768107 8768421 -241919433 + AluSp SINE Alu 1 313 0 2265 92 0 3 chr2 8768497 8768790 -241919064 + AluSg SINE Alu 1 292 -18 427 274 101 48 chr2 8771307 8771515 -241916339 + MIR SINE MIR 6 224 -38 283 253 44 22 chr2 8771895 8771986 -241915868 + MIR SINE MIR 55 147 -61 1605 181 32 0 chr2 8772248 8772525 -241915329 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 8772561 8772857 -241914997 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 8773098 8773270 -241914584 - FAM SINE Alu 0 175 1 1668 171 46 0 chr2 8773281 8773562 -241914292 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 8773657 8773893 -241913961 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 8774035 8774339 -241913515 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 8774794 8774818 -241913036 + AT_rich Low_complexity Low_complexity 1 24 0 2253 97 6 39 chr2 8775163 8775338 -241912516 - AluSx SINE Alu 0 302 140 2121 125 7 10 chr2 8775338 8775505 -241912349 - AluSx SINE Alu -9 303 136 2130 115 0 7 chr2 8775505 8775800 -241912054 - AluSg SINE Alu -17 293 1 2121 125 7 10 chr2 8775800 8775936 -241911918 - AluSx SINE Alu -176 136 1 2253 97 6 39 chr2 8775936 8776071 -241911783 - AluSx SINE Alu -162 140 2 2422 79 3 16 chr2 8776287 8776604 -241911250 + AluSq SINE Alu 1 313 0 1817 166 46 0 chr2 8776859 8777184 -241910670 + MER47A DNA MER2_type 27 366 0 189 0 0 0 chr2 8778852 8778873 -241908981 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1706 167 13 29 chr2 8778922 8779233 -241908621 + AluJo SINE Alu 1 306 -6 290 259 80 45 chr2 8779380 8779492 -241908362 + L3 LINE CR1 1238 1353 -224 2306 100 3 0 chr2 8781785 8782086 -241905768 + AluSq SINE Alu 1 302 -11 1563 173 26 48 chr2 8782122 8782434 -241905420 + AluJo SINE Alu 1 305 -7 1981 120 7 0 chr2 8782607 8782883 -241904971 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 8782883 8782905 -241904949 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 8785091 8785426 -241902428 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 8785457 8785559 -241902295 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 8785740 8786046 -241901808 + AluSg SINE Alu 1 306 -4 380 252 56 0 chr2 8786101 8786208 -241901646 + MIR SINE MIR 149 261 -1 1943 85 114 7 chr2 8786533 8786805 -241901049 - AluSg SINE Alu -9 301 1 1522 148 13 62 chr2 8786849 8787154 -241900700 + AluJo SINE Alu 15 304 -8 40 37 0 0 chr2 8787166 8787220 -241900634 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 8787220 8787240 -241900614 + (CA)n Simple_repeat Simple_repeat 2 21 0 255 61 0 0 chr2 8787273 8787306 -241900548 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 8787548 8787576 -241900278 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 8788610 8788646 -241899208 + AT_rich Low_complexity Low_complexity 1 36 0 2086 129 24 0 chr2 8788719 8789014 -241898840 + AluSq SINE Alu 1 302 -11 780 165 44 25 chr2 8789997 8790155 -241897699 - AluSg/x SINE Alu -13 296 136 412 238 0 0 chr2 8790154 8790238 -241897616 - FRAM/FAM SINE Alu -92 84 1 * 2101 87 50 3 chr2 8790660 8790959 -241896895 + AluSq SINE Alu 1 313 0 2146 83 6 92 chr2 8791085 8791412 -241896442 - AluSq SINE Alu -14 299 1 2171 117 7 0 chr2 8791429 8791737 -241896117 - AluSx SINE Alu -1 311 2 417 273 43 50 chr2 8792781 8792920 -241894934 + MIR SINE MIR 2 139 -123 279 265 53 53 chr2 8793333 8793465 -241894389 + MIR SINE MIR 16 147 -61 1605 181 32 0 chr2 8793727 8794004 -241893850 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 8794040 8794336 -241893518 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 8794577 8794749 -241893105 - FAM SINE Alu 0 175 1 1724 164 46 0 chr2 8794760 8795041 -241892813 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 8795136 8795372 -241892482 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 8795514 8795818 -241892036 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 8796273 8796297 -241891557 + AT_rich Low_complexity Low_complexity 1 24 0 1990 98 59 0 chr2 8796640 8796927 -241890927 - AluSx SINE Alu -8 304 1 4249 146 38 122 chr2 8796971 8797378 -241890476 - MER21A LTR ERV1 -6 925 485 2179 108 27 0 chr2 8797378 8797673 -241890181 + AluSx SINE Alu 1 303 -9 4249 146 38 122 chr2 8797673 8798262 -241889592 - MER21A LTR ERV1 -446 485 13 1894 125 7 4 chr2 8798670 8798983 -241888871 - AluSq SINE Alu 0 314 1 2317 98 0 3 chr2 8799205 8799500 -241888354 - AluSq SINE Alu -14 299 6 1601 175 0 52 chr2 8799834 8799989 -241887865 - AluJo SINE Alu -24 288 153 2463 80 0 0 chr2 8799989 8800288 -241887566 - AluSg SINE Alu -11 299 1 1601 175 0 52 chr2 8800288 8800418 -241887436 - AluJo SINE Alu -159 153 18 286 218 154 13 chr2 8801164 8801242 -241886612 + L2 LINE L2 3184 3272 0 702 158 79 20 chr2 8801902 8802054 -241885800 + MER3 DNA MER1_type 1 161 -48 586 307 20 0 chr2 8802054 8802256 -241885598 + L1MB7 LINE L1 5970 6175 -9 339 232 11 21 chr2 8802326 8802421 -241885433 + L1MC5 LINE L1 7824 7917 -44 297 125 0 0 chr2 8802450 8802490 -241885364 + MER3 DNA MER1_type 160 199 -10 1845 166 27 0 chr2 8802665 8802960 -241884894 + AluJb SINE Alu 6 308 -4 27 0 0 0 chr2 8803136 8803163 -241884691 + AT_rich Low_complexity Low_complexity 1 27 0 2044 100 7 43 chr2 8803165 8803464 -241884390 - AluSx SINE Alu -24 288 1 1629 81 5 0 chr2 8804008 8804206 -241883648 + AluSc SINE Alu 1 199 -110 2306 100 3 0 chr2 8806450 8806751 -241881103 + AluSq SINE Alu 1 302 -11 1450 182 28 48 chr2 8806787 8807078 -241880776 + AluJo SINE Alu 1 285 -27 1981 120 7 0 chr2 8807270 8807546 -241880308 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 8807546 8807568 -241880286 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 8809754 8810089 -241877765 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 8810120 8810222 -241877632 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 8810403 8810709 -241877145 + AluSg SINE Alu 1 306 -4 391 243 56 0 chr2 8810764 8810871 -241876983 + MIR SINE MIR 149 261 -1 180 0 0 0 chr2 8811196 8811216 -241876638 + (T)n Simple_repeat Simple_repeat 1 20 0 1711 66 0 0 chr2 8811268 8811466 -241876388 - AluSc SINE Alu -109 200 3 997 124 0 0 chr2 8811591 8811720 -241876134 - FLAM_C SINE Alu 0 133 5 1888 152 0 20 chr2 8812272 8812568 -241875286 - AluSx SINE Alu -22 290 1 815 161 101 8 chr2 8812577 8812756 -241875098 - L1MD3 LINE L1 0 7995 7834 2193 112 7 0 chr2 8812756 8813052 -241874802 - AluSx SINE Alu -14 298 1 815 161 101 8 chr2 8813052 8813079 -241874775 - L1MD3 LINE L1 -161 7834 7562 1587 124 98 23 chr2 8813100 8813366 -241874488 + AluJo SINE Alu 1 286 -26 792 170 146 24 chr2 8813383 8813595 -241874259 - L1MB5 LINE L1 -2 6172 5935 461 148 44 23 chr2 8813567 8813656 -241874198 - L1MD3 LINE L1 -201 7794 7621 * 1827 121 4 0 chr2 8813689 8813938 -241873916 + AluSx SINE Alu 1 250 -62 1780 174 56 25 chr2 8814406 8814798 -241873056 + MLT1C LTR MaLR 12 415 -52 1799 137 6 37 chr2 8814817 8815139 -241872715 - AluJb SINE Alu 0 312 1 708 145 120 0 chr2 8816631 8816748 -241871106 + FLAM_C SINE Alu 1 131 -2 247 300 22 22 chr2 8816764 8816854 -241871000 + L1MB7 LINE L1 5558 5647 -474 2357 86 0 22 chr2 8816975 8817289 -241870565 - AluSq SINE Alu -6 307 1 247 264 57 89 chr2 8818520 8818800 -241869054 - L1M4 LINE L1 -644 5534 5264 374 279 107 62 chr2 8819034 8819278 -241868576 - L1M4 LINE L1 -3638 2508 2254 3772 172 41 20 chr2 8819294 8819999 -241867855 - L1MB8 LINE L1 0 6178 5459 2507 62 0 3 chr2 8820178 8820482 -241867372 + AluY SINE Alu 1 303 -8 231 114 0 0 chr2 8820750 8820785 -241867069 + (A)n Simple_repeat Simple_repeat 1 35 0 736 219 12 19 chr2 8820802 8820962 -241866892 + MER5A DNA MER1_type 28 186 -3 213 342 26 51 chr2 8821042 8821159 -241866695 - L2 LINE L2 -10 3262 3149 1698 171 3 13 chr2 8821548 8821852 -241866002 + AluJo SINE Alu 1 301 -11 234 311 185 44 chr2 8821854 8822337 -241865517 - L2 LINE L2 0 3313 2760 1947 123 7 20 chr2 8822951 8823251 -241864603 - AluSx SINE Alu -16 296 1 386 69 103 0 chr2 8827944 8828002 -241859852 - MADE1 DNA Mariner -15 65 2 1737 161 94 16 chr2 8828908 8829280 -241858574 + L1MB3 LINE L1 5773 6173 -10 1727 169 42 0 chr2 8829303 8829587 -241858267 + AluJo SINE Alu 1 296 -16 1750 178 44 0 chr2 8829587 8829908 -241857946 + L1MB7 LINE L1 5827 6161 -23 1297 188 26 48 chr2 8830151 8830460 -241857394 - AluJb SINE Alu -10 302 1 649 190 0 0 chr2 8831108 8831224 -241856630 + AluSg/x SINE Alu 194 309 0 35 0 0 0 chr2 8831234 8831269 -241856585 + AT_rich Low_complexity Low_complexity 1 35 0 625 203 79 57 chr2 8832592 8832769 -241855085 + Charlie1b DNA MER1_type 11 191 -332 225 88 88 0 chr2 8832825 8832859 -241854995 + Charlie1b DNA MER1_type 487 523 0 1653 197 100 39 chr2 8833245 8833357 -241854497 - L1ME2 LINE L1 0 6164 6060 4025 58 8 0 chr2 8833357 8833842 -241854012 + L1PA7 LINE L1 5666 6154 0 1653 197 100 39 chr2 8833842 8834241 -241853613 - L1ME2 LINE L1 -104 6060 5622 305 226 78 17 chr2 8834263 8834378 -241853476 - L1MC5 LINE L1 -52 7909 7788 257 261 225 42 chr2 8834900 8835042 -241852812 + L1ME LINE L1 5493 5660 -461 2185 99 7 0 chr2 8835138 8835446 -241852408 + AluSp SINE Alu 1 310 0 1815 144 46 0 chr2 8835633 8835917 -241851937 + AluJb SINE Alu 1 297 -15 664 212 51 78 chr2 8836138 8836355 -241851499 - MER20 DNA MER1_type 0 219 9 2103 110 14 7 chr2 8836398 8836690 -241851164 - AluSx SINE Alu -18 294 1 1394 107 0 5 chr2 8836735 8836922 -241850932 + AluSg/x SINE Alu 111 296 -16 669 279 109 5 chr2 8837202 8837403 -241850451 + MIR SINE MIR 37 258 -4 295 314 145 6 chr2 8837407 8837566 -241850288 - MIR SINE MIR -72 190 10 2160 95 17 7 chr2 8838083 8838377 -241849477 - AluSx SINE Alu -15 297 1 670 198 33 0 chr2 8839203 8839324 -241848530 + FLAM_C SINE Alu 9 133 -10 349 257 57 86 chr2 8839602 8839777 -241848077 + L2 LINE L2 3122 3291 -22 28 0 0 0 chr2 8842099 8842127 -241845727 + GC_rich Low_complexity Low_complexity 1 28 0 1226 22 0 0 chr2 8842281 8842419 -241845435 - L1PA5 LINE L1 -271 5883 5746 2237 94 19 7 chr2 8842490 8842799 -241845055 - AluSq SINE Alu 0 313 1 1755 108 44 4 chr2 8843474 8843724 -241844130 + AluSx SINE Alu 18 277 -35 252 0 0 0 chr2 8843728 8843756 -241844098 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 576 247 149 39 chr2 8844122 8844721 -241843133 + L1MEd LINE L1 991 1641 -4488 496 197 171 0 chr2 8845080 8845203 -241842651 + MIR SINE MIR 103 245 -17 2153 97 3 0 chr2 8845306 8845596 -241842258 - AluSp SINE Alu -22 291 1 21 0 0 0 chr2 8845601 8845622 -241842232 + AT_rich Low_complexity Low_complexity 1 21 0 1804 127 11 7 chr2 8846468 8846752 -241841102 - AluSx SINE Alu -23 289 5 198 355 79 62 chr2 8846838 8847193 -241840661 + L2 LINE L2 2460 2820 -494 718 57 67 9 chr2 8850054 8850159 -241837695 + HY1 scRNA scRNA 1 111 -1 184 264 287 0 chr2 8850599 8850686 -241837168 + MIR SINE MIR 20 131 -131 863 196 99 22 chr2 8850861 8851719 -241836135 + L1M3 LINE L1 4765 5763 -420 180 0 0 0 chr2 8851740 8851760 -241836094 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 863 152 96 63 chr2 8851892 8852162 -241835692 + L1MB3 LINE L1 5108 5386 -760 2116 154 112 49 chr2 8852180 8852418 -241835436 + L1MB3 LINE L1 5495 5717 -457 2177 73 0 7 chr2 8852418 8852726 -241835128 - AluY SINE Alu 0 306 1 2116 154 112 49 chr2 8852726 8853104 -241834750 + L1MB3 LINE L1 5717 6173 -1 1614 158 43 4 chr2 8853126 8853405 -241834449 + AluJo SINE Alu 6 295 -17 30 59 0 0 chr2 8853730 8853781 -241834073 + GC_rich Low_complexity Low_complexity 1 51 0 251 206 48 32 chr2 8854710 8854773 -241833081 + L2 LINE L2 3202 3265 -7 2032 99 0 18 chr2 8854838 8855120 -241832734 - AluSq SINE Alu -36 277 1 2270 86 3 0 chr2 8855331 8855634 -241832220 - AluSc SINE Alu -5 304 1 1381 168 97 8 chr2 8855635 8855903 -241831951 - AluJo SINE Alu -19 293 2 528 259 30 15 chr2 8855904 8855936 -241831918 - Charlie2 DNA MER1_type -34 2828 2798 2157 88 3 0 chr2 8855936 8856230 -241831624 + AluY SINE Alu 1 295 -16 528 259 30 15 chr2 8856230 8856394 -241831460 - Charlie2 DNA MER1_type -64 2798 2629 1065 188 156 71 chr2 8856395 8856859 -241830995 + MLT1F LTR MaLR 2 576 -17 2510 50 0 0 chr2 8857483 8857780 -241830074 - AluSc SINE Alu -10 299 3 952 124 0 0 chr2 8857905 8858034 -241829820 - FLAM_C SINE Alu 0 133 5 1792 156 0 20 chr2 8858580 8858882 -241828972 - AluSx SINE Alu -16 296 1 788 168 94 5 chr2 8858891 8859070 -241828784 - L1MD3 LINE L1 0 7995 7833 2089 110 3 0 chr2 8859070 8859361 -241828493 - AluSx SINE Alu -14 298 7 788 168 94 5 chr2 8859361 8859393 -241828461 - L1MD3 LINE L1 -162 7833 7562 1495 124 98 23 chr2 8859414 8859680 -241828174 + AluJo SINE Alu 1 286 -26 807 174 141 24 chr2 8859697 8859910 -241827944 - L1MB5 LINE L1 -2 6172 5935 470 133 44 23 chr2 8859882 8859971 -241827883 - L1MD3 LINE L1 -201 7794 7621 * 1784 120 0 0 chr2 8860004 8860254 -241827600 + AluSx SINE Alu 1 250 -62 1796 208 52 22 chr2 8860722 8861140 -241826714 + MLT1C LTR MaLR 12 563 -63 1708 143 6 22 chr2 8861140 8861455 -241826399 - AluJb SINE Alu -2 310 1 1796 208 52 22 chr2 8861455 8861521 -241826333 + MLT1C LTR MaLR 563 626 0 314 125 21 0 chr2 8861744 8861792 -241826062 - MLT1B LTR MaLR -63 327 279 1851 143 3 13 chr2 8861946 8862109 -241825745 - AluJb SINE Alu -15 297 137 2024 89 6 70 chr2 8862109 8862424 -241825430 - AluSx SINE Alu -17 295 1 1851 143 3 13 chr2 8862424 8862560 -241825294 - AluJb SINE Alu -175 137 1 1992 127 6 22 chr2 8863388 8863521 -241824333 + AluSx SINE Alu 1 135 -177 2096 102 17 0 chr2 8863521 8863816 -241824038 + AluSp SINE Alu 1 300 -13 1992 127 6 22 chr2 8863816 8863997 -241823857 + AluSx SINE Alu 135 310 -2 1748 128 25 75 chr2 8864001 8864322 -241823532 + AluJb SINE Alu 1 305 -7 984 213 126 12 chr2 8864628 8864882 -241822972 - AluSg1 SINE Alu -14 295 13 2298 81 0 7 chr2 8865182 8865490 -241822364 + AluY SINE Alu 1 306 -5 870 148 0 0 chr2 8865499 8865641 -241822213 + FLAM_C SINE Alu 1 142 -1 281 227 172 78 chr2 8865971 8866099 -241821755 - MIR3 SINE MIR -45 163 24 846 169 0 0 chr2 8866166 8866296 -241821558 - FLAM_C SINE Alu -3 130 1 1544 174 27 13 chr2 8866304 8866603 -241821251 - AluJo SINE Alu -9 303 1 1758 171 14 0 chr2 8866907 8867200 -241820654 + AluJb SINE Alu 1 297 -15 2184 94 0 3 chr2 8867204 8867503 -241820351 + AluSx SINE Alu 1 298 -14 191 36 36 0 chr2 8867509 8867537 -241820317 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 314 256 64 40 chr2 8867825 8867950 -241819904 - LTR67 LTR ERVL -2 555 428 1841 81 49 0 chr2 8868557 8868803 -241819051 - AluSg SINE Alu -14 296 39 648 125 0 0 chr2 8868803 8868891 -241818963 - AluSg/x SINE Alu -22 288 201 232 198 427 0 chr2 8868892 8868988 -241818866 + MIR SINE MIR 56 192 -70 232 233 0 0 chr2 8869066 8869109 -241818745 + L2 LINE L2 3264 3306 -7 1969 122 7 3 chr2 8869143 8869446 -241818408 - AluSx SINE Alu -8 304 1 2283 97 0 0 chr2 8869562 8869871 -241817983 + AluSg SINE Alu 1 309 -1 206 279 0 0 chr2 8869908 8869951 -241817903 - L2 LINE L2 -7 3306 3264 265 235 345 8 chr2 8870029 8870148 -241817706 - MIR SINE MIR -70 192 34 839 134 25 45 chr2 8871351 8871508 -241816346 - FAM SINE Alu -14 171 18 548 113 94 57 chr2 8871595 8871701 -241816153 + MER5A DNA MER1_type 1 110 -79 193 333 32 0 chr2 8872219 8872282 -241815572 + L2 LINE L2 3249 3313 0 2334 90 0 0 chr2 8872317 8872618 -241815236 - AluSx SINE Alu -9 303 3 801 151 0 0 chr2 8872853 8872972 -241814882 + FLAM_C SINE Alu 1 119 -24 1911 92 55 14 chr2 8873389 8873682 -241814172 - AluSq SINE Alu -6 307 3 2276 89 7 0 chr2 8873755 8874057 -241813797 - AluSg SINE Alu -6 304 1 2140 110 7 0 chr2 8874074 8874382 -241813472 - AluSx SINE Alu -1 311 2 309 245 57 99 chr2 8875149 8875341 -241812513 - L1MEd LINE L1 -5933 186 3 2193 100 0 3 chr2 8875466 8875775 -241812079 + AluY SINE Alu 1 308 -3 1988 117 7 32 chr2 8875972 8876281 -241811573 + AluSg SINE Alu 2 302 -8 2190 88 10 0 chr2 8876298 8876595 -241811259 + AluSg SINE Alu 1 300 -10 1358 113 0 0 chr2 8876741 8876936 -241810918 + AluSg/x SINE Alu 92 286 -24 310 255 43 11 chr2 8876947 8877041 -241810813 + L1MC4a LINE L1 5376 5472 -2336 198 0 0 0 chr2 8877041 8877063 -241810791 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 841 130 23 0 chr2 8877063 8877194 -241810660 - AluSq/x SINE Alu -178 134 1 314 249 37 21 chr2 8877207 8877322 -241810532 + L1MC4a LINE L1 5475 5591 -530 430 285 75 31 chr2 8877345 8877573 -241810281 + L1MC4a LINE L1 5705 5942 -1866 1822 145 3 6 chr2 8877616 8877927 -241809927 + AluSx SINE Alu 1 310 -2 1727 161 17 7 chr2 8878046 8878344 -241809510 + AluJb SINE Alu 5 305 -7 232 149 106 0 chr2 8878521 8878568 -241809286 - L2 LINE L2 -5 3308 3257 755 278 0 0 chr2 8878699 8878872 -241808982 + MER8 DNA MER2_type 5 177 -62 328 200 46 0 chr2 8878901 8878966 -241808888 + MER8 DNA MER2_type 172 239 0 26 0 0 0 chr2 8879277 8879303 -241808551 + AT_rich Low_complexity Low_complexity 1 26 0 659 208 129 102 chr2 8879354 8879540 -241808314 + MER20B DNA MER1_type 83 262 -521 1807 148 3 10 chr2 8879540 8879837 -241808017 - AluSx SINE Alu -17 295 1 659 208 129 102 chr2 8879837 8879903 -241807951 + MER20B DNA MER1_type 262 347 -436 1979 128 0 16 chr2 8879903 8880207 -241807647 + AluSx SINE Alu 1 299 -13 659 208 129 102 chr2 8880207 8880247 -241807607 + MER20B DNA MER1_type 347 384 -399 328 243 7 81 chr2 8880564 8880700 -241807154 + FLAM_C SINE Alu 8 133 0 288 0 0 0 chr2 8880720 8880752 -241807102 + (T)n Simple_repeat Simple_repeat 1 32 0 1214 164 74 4 chr2 8880758 8880989 -241806865 + AluJo SINE Alu 6 252 -60 1449 190 45 3 chr2 8881147 8881437 -241806417 - AluJo SINE Alu -10 302 1 1950 123 7 13 chr2 8881634 8881934 -241805920 + AluSx SINE Alu 1 298 -14 2045 107 10 23 chr2 8882093 8882402 -241805452 - AluSq SINE Alu -8 305 1 14032 129 35 26 chr2 8882495 8882847 -241805007 - Tigger1 DNA MER2_type -18 2400 2053 2258 100 7 0 chr2 8882847 8883157 -241804697 - AluSp SINE Alu -1 312 1 14032 129 35 26 chr2 8883157 8885183 -241802671 - Tigger1 DNA MER2_type -365 2053 1 928 89 16 0 chr2 8885450 8885573 -241802281 + AluSp SINE Alu 1 125 -188 28 0 0 0 chr2 8886278 8886306 -241801548 + GC_rich Low_complexity Low_complexity 1 28 0 27 92 0 0 chr2 8886530 8886606 -241801248 + GC_rich Low_complexity Low_complexity 1 76 0 186 186 23 23 chr2 8888690 8888733 -241799121 + MIR SINE MIR 85 127 -135 911 247 20 51 chr2 8888958 8889213 -241798641 - MIR SINE MIR -3 259 13 375 305 93 55 chr2 8889464 8889601 -241798253 + MIR SINE MIR 15 160 -102 1732 160 3 7 chr2 8889601 8889889 -241797965 + AluJb SINE Alu 1 287 -25 375 305 93 55 chr2 8889889 8889990 -241797864 + MIR SINE MIR 160 256 -6 1135 226 47 68 chr2 8890506 8890629 -241797225 + MLT2C2 LTR ERVL 2 126 -338 2215 109 0 0 chr2 8890629 8890932 -241796922 - AluSx SINE Alu -9 303 1 1135 226 47 68 chr2 8890932 8891237 -241796617 + MLT2C2 LTR ERVL 126 421 -43 2097 121 0 3 chr2 8891326 8891624 -241796230 - AluSx SINE Alu -15 297 1 210 37 0 0 chr2 8891720 8891747 -241796107 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 214 340 123 9 chr2 8891789 8891895 -241795959 - MIR SINE MIR -108 154 37 313 262 78 10 chr2 8892589 8892692 -241795162 - L2 LINE L2 -4 3309 3200 814 209 47 29 chr2 8893807 8893979 -241793875 + MIR SINE MIR 8 182 -80 267 340 77 57 chr2 8894027 8894377 -241793477 + L2 LINE L2 2916 3272 0 726 241 63 130 chr2 8895519 8896088 -241791766 - LTR67 LTR ERVL -8 549 19 236 242 253 33 chr2 8896432 8896523 -241791331 - L2 LINE L2 0 3272 3162 186 322 111 30 chr2 8896557 8896756 -241791098 - L2 LINE L2 -264 3049 2835 2368 81 3 3 chr2 8896780 8897078 -241790776 + AluSg SINE Alu 1 298 -12 894 135 0 8 chr2 8897160 8897293 -241790561 - FLAM_C SINE Alu -1 132 1 1300 139 17 13 chr2 8897387 8897617 -241790237 - L1MB3 LINE L1 -2 6181 5951 2376 116 0 0 chr2 8897854 8898165 -241789689 - AluSx SINE Alu -1 311 1 501 264 184 20 chr2 8898524 8898725 -241789129 + MIR SINE MIR 23 256 -6 2454 87 0 0 chr2 8898807 8899117 -241788737 - AluY SINE Alu -1 310 1 1170 46 0 0 chr2 8899120 8899251 -241788603 - AluY SINE Alu -179 132 2 243 292 15 15 chr2 8900273 8900338 -241787516 + L2 LINE L2 3237 3301 -12 2613 56 0 0 chr2 8901697 8901999 -241785855 + AluY SINE Alu 1 302 -9 260 240 56 64 chr2 8902306 8902431 -241785423 + L2 LINE L2 3137 3260 -12 385 306 68 88 chr2 8902841 8903250 -241784604 - L2 LINE L2 -46 3226 2826 449 290 16 24 chr2 8903448 8903572 -241784282 - MIR SINE MIR -63 145 23 320 333 26 0 chr2 8904395 8904509 -241783345 + MIR SINE MIR 4 120 -142 21 0 0 0 chr2 8904509 8904530 -241783324 + AT_rich Low_complexity Low_complexity 1 21 0 502 186 41 10 chr2 8904551 8904648 -241783206 + MER33 DNA MER1_type 10 109 -215 470 290 101 63 chr2 8904882 8905120 -241782734 + MIR SINE MIR 16 262 0 251 259 0 0 chr2 8905360 8905414 -241782440 - LTR33 LTR ERVL -358 163 110 1303 133 282 0 chr2 8905414 8905655 -241782199 + AluSg1 SINE Alu 1 309 0 2374 119 0 0 chr2 8905672 8905984 -241781870 + AluSx SINE Alu 1 312 0 326 243 19 19 chr2 8905984 8906084 -241781770 - LTR33 LTR ERVL -398 123 21 564 332 21 0 chr2 8906103 8906290 -241781564 + MIR3 SINE MIR 5 195 -13 1594 177 141 52 chr2 8906298 8906783 -241781071 + L1MB7 LINE L1 5359 5889 -295 7117 58 9 1 chr2 8906794 8907688 -241780166 + L1PA5 LINE L1 5254 6154 0 436 289 31 0 chr2 8907780 8907939 -241779915 + LTR33 LTR ERVL 304 467 -54 1188 141 3 0 chr2 8907985 8908370 -241779484 + (TCCA)n Simple_repeat Simple_repeat 1 386 0 213 205 0 0 chr2 8908383 8908422 -241779432 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 220 267 95 103 chr2 8908459 8908575 -241779279 - L2 LINE L2 -8 3264 3150 222 118 0 0 chr2 8908620 8908654 -241779200 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 321 282 70 5 chr2 8909661 8909826 -241778028 + MIR SINE MIR 16 191 -63 191 286 143 0 chr2 8909895 8909951 -241777903 + MIR SINE MIR 87 150 -58 186 43 0 0 chr2 8910390 8910413 -241777441 + (CAGCC)n Simple_repeat Simple_repeat 1 23 0 270 250 45 0 chr2 8910477 8910565 -241777289 + CT-rich Low_complexity Low_complexity 4 95 0 635 253 125 108 chr2 8910645 8910847 -241777007 + L3 LINE CR1 1083 1280 -297 1906 134 10 7 chr2 8910847 8911137 -241776717 + AluSx SINE Alu 1 291 -21 635 253 125 108 chr2 8911137 8911405 -241776449 + L3 LINE CR1 1280 1561 -16 2284 117 3 3 chr2 8911861 8912169 -241775685 + AluSg SINE Alu 1 308 -2 1728 145 89 3 chr2 8912496 8912778 -241775076 + AluSx SINE Alu 1 306 -6 640 197 50 67 chr2 8913992 8914231 -241773623 - L1MC5 LINE L1 -64 7897 7663 1784 148 42 0 chr2 8914282 8914545 -241773309 - AluJo SINE Alu -38 274 1 414 283 47 57 chr2 8914545 8914837 -241773017 - L1MC5 LINE L1 -305 7656 7366 440 256 34 68 chr2 8915007 8915051 -241772803 + LTR16C LTR ERVL 167 211 -280 1974 149 3 3 chr2 8915051 8915371 -241772483 + AluJb SINE Alu 1 312 0 2294 110 0 0 chr2 8915379 8915665 -241772189 + AluSx SINE Alu 1 287 -20 192 40 0 0 chr2 8915665 8915690 -241772164 + (CA)n Simple_repeat Simple_repeat 2 26 0 440 256 34 68 chr2 8915695 8915817 -241772037 + LTR16C LTR ERVL 218 336 -155 23 0 0 0 chr2 8915832 8915855 -241771999 + AT_rich Low_complexity Low_complexity 1 23 0 361 261 104 8 chr2 8915917 8916051 -241771803 + LTR16C LTR ERVL 345 491 0 183 188 0 0 chr2 8916643 8916691 -241771163 + (TG)n Simple_repeat Simple_repeat 2 49 0 253 324 36 36 chr2 8916879 8916990 -241770864 + MIR SINE MIR 41 151 -111 3535 116 118 19 chr2 8917173 8917273 -241770581 + L1MC1 LINE L1 5587 5676 -657 2221 108 3 16 chr2 8917273 8917578 -241770276 + AluSx SINE Alu 1 301 -11 3535 116 118 19 chr2 8917578 8918149 -241769705 + L1MC1 LINE L1 5676 6324 -9 1880 155 14 0 chr2 8918204 8918488 -241769366 - AluJo SINE Alu -12 300 13 871 181 115 29 chr2 8918899 8919142 -241768712 - LTR45B LTR ERV1 0 489 226 2101 111 10 7 chr2 8919154 8919452 -241768402 + AluSq SINE Alu 1 299 -14 249 200 0 0 chr2 8919516 8919571 -241768283 - LTR45B LTR ERV1 -306 183 129 356 96 0 0 chr2 8919611 8919663 -241768191 - LTR45B LTR ERV1 -361 128 77 232 259 86 0 chr2 8919782 8919840 -241768014 + MIR SINE MIR 88 150 -112 325 285 65 32 chr2 8919911 8920034 -241767820 + MIR3 SINE MIR 71 197 -11 240 362 11 11 chr2 8920040 8920134 -241767720 + MER5A DNA MER1_type 7 100 -89 186 302 39 116 chr2 8920263 8920392 -241767462 + L2 LINE L2 2606 2724 -590 836 281 117 12 chr2 8920724 8921300 -241766554 - L1ME LINE L1 -357 5813 5175 186 43 0 0 chr2 8922216 8922239 -241765615 + (TG)n Simple_repeat Simple_repeat 2 24 0 2281 92 7 3 chr2 8922481 8922775 -241765079 + AluSx SINE Alu 1 295 -17 411 214 296 0 chr2 8923028 8923234 -241764620 + L2 LINE L2 2509 2775 -539 189 273 23 0 chr2 8923427 8923471 -241764383 + L2 LINE L2 3265 3309 -4 2261 98 0 0 chr2 8923555 8923840 -241764014 - AluSx SINE Alu -27 285 1 376 260 107 30 chr2 8924289 8924458 -241763396 - MIR SINE MIR 0 262 81 649 318 77 14 chr2 8924477 8924895 -241762959 + LTR16B LTR ERVL 21 464 0 325 259 129 14 chr2 8924917 8925064 -241762790 + MLT1J LTR MaLR 10 173 -338 359 132 0 29 chr2 8925191 8925259 -241762595 - L1M4 LINE L1 -914 5232 5167 2149 152 0 0 chr2 8925259 8925556 -241762298 + AluSx SINE Alu 1 297 -15 1355 153 80 90 chr2 8925605 8925906 -241761948 + AluJo SINE Alu 1 298 -14 265 232 0 61 chr2 8926078 8926160 -241761694 - MIR SINE MIR -116 92 16 1346 43 0 0 chr2 8926445 8926629 -241761225 + L1PA4 LINE L1 5983 6166 0 546 176 235 0 chr2 8927074 8927227 -241760627 - MER53 DNA DNA 0 189 1 198 323 125 67 chr2 8928231 8928544 -241759310 + L2 LINE L2 2921 3251 -21 937 189 13 13 chr2 8928801 8928960 -241758894 - FRAM SINE Alu -15 161 3 1922 134 38 3 chr2 8928974 8929264 -241758590 - AluSx SINE Alu -12 300 1 571 295 112 69 chr2 8929313 8929446 -241758408 - L1ME4a LINE L1 -296 5825 5699 2348 100 0 13 chr2 8929446 8929756 -241758098 - AluSx SINE Alu -6 306 1 571 295 112 69 chr2 8929756 8930168 -241757686 - L1ME4a LINE L1 -422 5699 5234 384 77 0 0 chr2 8930168 8930220 -241757634 + (TA)n Simple_repeat Simple_repeat 1 52 0 571 295 112 69 chr2 8930220 8930337 -241757517 - L1ME4a LINE L1 -887 5234 5124 24 0 0 0 chr2 8930441 8930465 -241757389 + AT_rich Low_complexity Low_complexity 1 24 0 316 274 234 51 chr2 8930777 8931131 -241756723 + L2 LINE L2 2853 3271 -1 344 282 86 58 chr2 8931587 8931761 -241756093 + MIR SINE MIR 34 212 -50 784 164 0 0 chr2 8932018 8932140 -241755714 + FLAM_C SINE Alu 1 122 -21 237 33 0 0 chr2 8932140 8932170 -241755684 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 590 11 34 11 chr2 8932197 8932285 -241755569 + (CA)n Simple_repeat Simple_repeat 1 90 0 386 287 108 46 chr2 8932450 8932595 -241755259 + L1ME4a LINE L1 5211 5346 -816 2258 112 0 7 chr2 8932595 8932891 -241754963 + AluSx SINE Alu 1 294 -18 386 287 108 46 chr2 8932891 8933003 -241754851 + L1ME4a LINE L1 5346 5485 -677 2017 123 10 30 chr2 8933020 8933320 -241754534 + AluJo SINE Alu 1 294 -18 258 248 111 46 chr2 8933323 8933476 -241754378 + L1ME4a LINE L1 5579 5741 -380 236 233 67 42 chr2 8933576 8933696 -241754158 + L1ME4a LINE L1 5974 6096 -25 2317 86 14 0 chr2 8934300 8934591 -241753263 - AluSx SINE Alu -17 295 1 2294 112 3 10 chr2 8935120 8935434 -241752420 + AluSx SINE Alu 1 312 0 2320 69 7 33 chr2 8935502 8935808 -241752046 + AluY SINE Alu 1 298 -13 1886 114 0 8 chr2 8936958 8937260 -241750594 + AluSx SINE Alu 30 312 0 2244 112 0 3 chr2 8938188 8938492 -241749362 - AluSx SINE Alu -9 303 1 2400 107 0 3 chr2 8939683 8939993 -241747861 - AluSg SINE Alu -1 309 1 193 292 79 11 chr2 8940495 8940584 -241747270 - L2 LINE L2 -556 2758 2664 415 277 150 58 chr2 8942619 8942829 -241745025 - L1ME4a LINE L1 -66 6055 5815 2445 87 0 0 chr2 8942829 8943127 -241744727 + AluSx SINE Alu 1 298 -14 415 277 150 58 chr2 8943127 8943176 -241744678 - L1ME4a LINE L1 -306 5815 5772 1837 159 0 21 chr2 8943441 8943724 -241744130 + AluJb SINE Alu 6 282 -30 512 30 15 0 chr2 8944152 8944218 -241743636 + (TTCA)n Simple_repeat Simple_repeat 4 70 0 347 267 0 0 chr2 8944512 8944587 -241743267 - MIR3 SINE MIR -51 157 83 255 180 66 0 chr2 8944614 8944675 -241743179 + GA-rich Low_complexity Low_complexity 2 66 0 252 320 107 27 chr2 8944921 8945071 -241742783 - L2 LINE L2 -29 3243 3082 3260 149 15 11 chr2 8945353 8945882 -241741972 + LTR26B LTR ERV1 1 531 0 480 313 0 0 chr2 8945970 8946101 -241741753 + MIR SINE MIR 111 241 -21 223 320 13 0 chr2 8946214 8946292 -241741562 - MIR SINE MIR -86 122 44 510 202 23 54 chr2 8946554 8946683 -241741171 + MER5A DNA MER1_type 12 136 -53 232 311 58 0 chr2 8946944 8947047 -241740807 - L2 LINE L2 -229 3043 2935 1023 240 43 0 chr2 8947085 8947318 -241740536 - MER115 DNA AcHobo 0 693 451 244 261 261 43 chr2 8947359 8947497 -241740357 - MER115 DNA AcHobo -308 385 218 508 195 29 98 chr2 8947692 8947866 -241739988 - L1M4 LINE L1 -1559 4587 4426 194 290 188 51 chr2 8947871 8948009 -241739845 - MIR SINE MIR -56 206 50 425 309 54 6 chr2 8948217 8948385 -241739469 + MER5B DNA MER1_type 1 176 -2 1806 139 0 22 chr2 8948505 8948779 -241739075 - AluJo SINE Alu -44 268 1 305 238 49 112 chr2 8948780 8948923 -241738931 + MIR SINE MIR 21 154 -108 762 230 227 16 chr2 8948929 8949299 -241738555 + MLT1H1 LTR MaLR 46 493 -62 185 311 44 82 chr2 8949592 8949727 -241738127 - L2 LINE L2 -21 3251 3122 1087 130 43 24 chr2 8949731 8949938 -241737916 + L1PA15 LINE L1 5942 6152 -13 365 252 63 0 chr2 8950781 8950908 -241736946 + MIR SINE MIR 25 159 -103 1870 127 92 11 chr2 8950908 8951255 -241736599 - THE1C LTR MaLR 0 375 1 2053 152 28 6 chr2 8951359 8951714 -241736140 + MLT1A1 LTR MaLR 3 365 0 1660 159 65 23 chr2 8952230 8952538 -241735316 - MLT1A1 LTR MaLR 0 365 45 1236 157 77 21 chr2 8952538 8952896 -241734958 + LTR47A LTR ERVL 1 452 0 318 85 0 21 chr2 8952899 8952946 -241734908 - MLT1A1 LTR MaLR -328 46 1 349 346 48 5 chr2 8952997 8953185 -241734669 - MIR SINE MIR -17 245 50 1861 158 13 17 chr2 8953351 8953649 -241734205 + AluJb SINE Alu 1 297 -15 2295 79 9 32 chr2 8954067 8954382 -241733472 + AluSx SINE Alu 1 308 -4 180 125 0 0 chr2 8954426 8954458 -241733396 + (CA)n Simple_repeat Simple_repeat 1 32 0 2069 153 3 3 chr2 8954615 8954923 -241732931 - AluJb SINE Alu -4 308 1 3657 208 68 19 chr2 8954952 8955645 -241732209 + Charlie1a DNA MER1_type 5 755 -2006 2335 105 0 3 chr2 8955645 8955950 -241731904 - AluSq SINE Alu -9 304 1 3657 208 68 19 chr2 8955950 8956175 -241731679 + Charlie1a DNA MER1_type 755 968 -487 2008 111 61 0 chr2 8956176 8956455 -241731399 - AluSq SINE Alu -17 296 1 891 169 144 88 chr2 8956461 8956650 -241731204 + Charlie1a DNA MER1_type 1077 1254 -1507 1733 165 0 4 chr2 8956650 8956917 -241730937 - AluJb SINE Alu -45 267 2 891 169 144 88 chr2 8956917 8957081 -241730773 + Charlie1a DNA MER1_type 1254 1450 -5 247 298 177 44 chr2 8957454 8957568 -241730286 + MER5A DNA MER1_type 11 153 -36 2087 114 7 36 chr2 8957568 8957875 -241729979 + AluSx SINE Alu 1 298 -14 247 298 177 44 chr2 8957875 8957918 -241729936 + MER5A DNA MER1_type 153 189 0 1980 147 39 74 chr2 8958243 8958781 -241729073 - MER51A LTR ERV1 0 640 1 776 334 98 14 chr2 8959029 8959787 -241728067 + L1MEc LINE L1 1000 1820 -4576 325 339 58 36 chr2 8959905 8960129 -241727725 + L1MEc LINE L1 1940 2168 -4047 845 222 6 11 chr2 8960135 8960311 -241727543 + FAM SINE Alu 1 175 0 289 234 170 34 chr2 8960329 8960363 -241727491 - L1MC5 LINE L1 -36 7925 7897 1456 202 6 42 chr2 8960363 8960675 -241727179 + AluJo SINE Alu 1 301 -11 289 234 170 34 chr2 8960675 8960875 -241726979 - L1MC5 LINE L1 -64 7897 7659 422 299 77 58 chr2 8960875 8960934 -241726920 + L1MEc LINE L1 2181 2237 -3978 2140 140 10 0 chr2 8960934 8961242 -241726612 - AluSx SINE Alu -1 311 1 422 299 77 58 chr2 8961242 8961389 -241726465 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 8961502 8961769 -241726085 - AluJo SINE Alu 0 312 16 1811 68 5 5 chr2 8962052 8962271 -241725583 + AluSp SINE Alu 1 219 -94 827 98 0 49 chr2 8962271 8962393 -241725461 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 8963079 8963106 -241724748 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 114 0 0 chr2 8963351 8963395 -241724459 + U5 snRNA snRNA 8 51 -65 278 169 264 0 chr2 8963559 8963673 -241724181 + MIR SINE MIR 104 261 -1 2390 97 13 0 chr2 8964088 8964396 -241723458 - AluSx SINE Alu 0 312 1 191 260 26 39 chr2 8965388 8965465 -241722389 + MIR3 SINE MIR 128 203 -5 180 231 0 0 chr2 8965858 8965897 -241721957 + MIR SINE MIR 91 129 -79 2288 110 0 10 chr2 8966566 8966875 -241720979 - AluSx SINE Alu -6 306 1 1414 147 107 20 chr2 8967478 8967730 -241720124 - AluJb SINE Alu -6 306 33 2043 93 41 10 chr2 8967786 8968077 -241719777 - AluSq SINE Alu -13 300 1 2283 157 95 17 chr2 8968197 8968618 -241719236 - LTR32 LTR ERVL -6 465 12 1887 290 53 25 chr2 8968630 8969303 -241718551 - HAL1 LINE L1 -310 2197 1497 2046 143 20 3 chr2 8969303 8969604 -241718250 + AluSx SINE Alu 1 306 -6 1887 290 53 25 chr2 8969604 8969727 -241718127 - HAL1 LINE L1 -1010 1497 1379 1090 285 124 14 chr2 8969760 8970266 -241717588 - HAL1 LINE L1 -1832 675 114 240 224 0 0 chr2 8970266 8970333 -241717521 + (TG)n Simple_repeat Simple_repeat 1 67 0 252 265 88 0 chr2 8970333 8970401 -241717453 - HAL1 LINE L1 -2421 86 13 345 243 21 104 chr2 8970981 8971045 -241716809 - MIR3 SINE MIR 0 208 140 280 81 0 0 chr2 8971045 8971082 -241716772 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2124 90 25 11 chr2 8971084 8971361 -241716493 - AluSq SINE Alu -32 281 1 345 243 21 104 chr2 8971361 8971437 -241716417 - MIR3 SINE MIR -69 139 77 554 261 79 14 chr2 8972229 8972444 -241715410 - L1M4 LINE L1 -1131 5015 4787 322 312 105 75 chr2 8972654 8972949 -241714905 + L2 LINE L2 2883 3186 -86 547 264 156 26 chr2 8973024 8973255 -241714599 - MIR SINE MIR 0 262 2 188 311 29 39 chr2 8973998 8974101 -241713753 + MIR SINE MIR 27 128 -134 2478 78 3 0 chr2 8974462 8974769 -241713085 + AluY SINE Alu 1 308 -3 2624 102 3 0 chr2 8975449 8975812 -241712042 + THE1B LTR MaLR 1 364 0 331 236 121 98 chr2 8975832 8976006 -241711848 - MER20B DNA MER1_type -604 179 2 1906 97 89 4 chr2 8976024 8976315 -241711539 + AluSc SINE Alu 1 313 0 273 182 125 23 chr2 8976346 8976434 -241711420 - L2 LINE L2 -14 3299 3203 2340 170 22 10 chr2 8977149 8977211 -241710643 - MSTB LTR MaLR -4 422 362 1847 115 11 11 chr2 8977211 8977472 -241710382 + AluSg SINE Alu 38 298 -12 2340 170 22 10 chr2 8977472 8977821 -241710033 - MSTB LTR MaLR -64 362 6 2336 92 3 13 chr2 8977821 8978126 -241709728 + AluSq SINE Alu 1 302 -11 854 29 20 0 chr2 8978820 8978922 -241708932 + AluY SINE Alu 208 311 0 2207 118 0 3 chr2 8980605 8980902 -241706952 - AluSx SINE Alu -3 309 14 251 169 0 51 chr2 8981346 8981405 -241706449 + L1MB2 LINE L1 6095 6150 -21 311 309 71 0 chr2 8981407 8981491 -241706363 + L1MC4 LINE L1 6614 6703 -1339 1880 123 42 11 chr2 8981618 8981902 -241705952 + AluSx SINE Alu 1 293 -19 2212 125 3 0 chr2 8982649 8982946 -241704908 + AluSx SINE Alu 3 300 -12 2236 86 0 4 chr2 8983691 8983970 -241703884 - AluSq SINE Alu -11 302 25 251 275 84 61 chr2 8984438 8984531 -241703323 - MIR SINE MIR -96 166 68 2388 155 19 19 chr2 8984531 8984963 -241702891 - MSTB1 LTR MaLR 0 432 1 251 275 84 61 chr2 8984963 8985000 -241702854 - MIR SINE MIR -194 68 33 779 201 0 0 chr2 8985534 8985678 -241702176 + U4 snRNA snRNA 1 144 -1 1149 123 0 0 chr2 8985929 8985953 -241701901 + (TGGG)n Simple_repeat Simple_repeat 1 203 0 1149 123 0 0 chr2 8985953 8986132 -241701722 + (TGGG)n Simple_repeat Simple_repeat 2 180 0 496 31 0 0 chr2 8986764 8986829 -241701025 + AluY SINE Alu 2 66 -244 180 77 0 0 chr2 8986848 8986874 -241700980 + (A)n Simple_repeat Simple_repeat 1 26 0 388 280 49 42 chr2 8987256 8987399 -241700455 + MIR SINE MIR 38 181 -81 1401 282 54 9 chr2 8987466 8987927 -241699927 + MLT1L LTR MaLR 58 539 -76 665 216 70 75 chr2 8987941 8988196 -241699658 + MIR SINE MIR 16 262 0 224 272 0 65 chr2 8988483 8988652 -241699202 + G-rich Low_complexity Low_complexity 2 159 0 2012 129 26 7 chr2 8989513 8989815 -241698039 - AluSx SINE Alu -4 308 1 2691 49 0 0 chr2 8990282 8990587 -241697267 - AluY SINE Alu -6 305 1 560 271 98 5 chr2 8990678 8990892 -241696962 + L1MEd LINE L1 594 827 -5292 1863 164 6 31 chr2 8990908 8991226 -241696628 - AluJb SINE Alu -2 310 1 26 30 0 0 chr2 8991237 8991270 -241696584 + AT_rich Low_complexity Low_complexity 1 33 0 544 270 103 68 chr2 8991285 8992137 -241695717 + L1MEd LINE L1 852 1673 -4637 1974 143 28 0 chr2 8992137 8992424 -241695430 + AluJb SINE Alu 1 295 -17 544 270 103 68 chr2 8992424 8992601 -241695253 + L1MEd LINE L1 1673 1842 -4468 2087 144 0 0 chr2 8992601 8992899 -241694955 - AluSx SINE Alu -14 298 1 544 270 103 68 chr2 8992899 8993295 -241694559 + L1MEd LINE L1 1842 2345 -3965 24 0 0 0 chr2 8993379 8993403 -241694451 + AT_rich Low_complexity Low_complexity 1 24 0 333 316 67 84 chr2 8993756 8994113 -241693741 - L2 LINE L2 -20 3252 2902 684 187 169 21 chr2 8994821 8995188 -241692666 + LTR48 LTR ERV1 362 706 -1 1347 175 34 7 chr2 8995189 8995458 -241692396 - L1MB4 LINE L1 -317 5863 5588 475 157 122 68 chr2 8995627 8995774 -241692080 + MLT1B LTR MaLR 1 155 -235 360 194 15 0 chr2 8995777 8995844 -241692010 + MLT1B LTR MaLR 303 370 -4 241 333 62 14 chr2 8996815 8996959 -241690895 - MIR3 SINE MIR -23 185 35 478 335 12 0 chr2 8997021 8997194 -241690660 + (TCTCTG)n Simple_repeat Simple_repeat 5 179 0 251 366 0 0 chr2 8997582 8997694 -241690160 + (CA)n Simple_repeat Simple_repeat 1 112 0 211 316 0 0 chr2 8997761 8997840 -241690014 + (CA)n Simple_repeat Simple_repeat 1 79 0 236 347 62 0 chr2 8998561 8998705 -241689149 - MLT1H1 LTR MaLR -335 220 68 1036 183 27 76 chr2 8998747 8999010 -241688844 + MLT1D LTR MaLR 256 505 0 887 231 113 48 chr2 8999913 9000224 -241687630 - MER58B DNA MER1_type -1 340 10 254 231 62 0 chr2 9000248 9000313 -241687541 - MER81 DNA DNA 0 114 46 282 308 19 19 chr2 9000967 9001071 -241686783 + MIR3 SINE MIR 53 156 -52 2350 58 19 22 chr2 9001103 9001416 -241686438 - AluSx SINE Alu 0 312 1 10862 128 32 35 chr2 9001936 9002765 -241685089 + Tigger1 DNA MER2_type 23 854 -1564 1902 118 186 14 chr2 9002765 9003130 -241684724 - MSTA LTR MaLR 0 428 1 10862 128 32 35 chr2 9003130 9004010 -241683844 + Tigger1 DNA MER2_type 854 1727 -691 1683 187 29 0 chr2 9004010 9004320 -241683534 + L1PA16 LINE L1 5848 6166 0 10862 128 32 35 chr2 9004320 9004501 -241683353 + Tigger1 DNA MER2_type 1727 1907 -511 1270 124 6 0 chr2 9004504 9004682 -241683172 - AluSx SINE Alu -133 179 1 923 147 35 56 chr2 9004685 9004883 -241682971 + Tigger1 DNA MER2_type 2225 2418 0 255 213 0 0 chr2 9005394 9005441 -241682413 + U2 snRNA snRNA 1 47 -141 1723 164 0 14 chr2 9005538 9005824 -241682030 + AluJo SINE Alu 1 282 -30 2254 95 0 0 chr2 9005875 9006169 -241681685 - AluSx SINE Alu -18 294 1 2066 88 7 11 chr2 9006718 9007044 -241680810 - AluSp SINE Alu 0 325 1 199 196 22 0 chr2 9007266 9007312 -241680542 + MIR SINE MIR 47 93 -169 474 78 0 117 chr2 9007332 9007373 -241680481 - MER53 DNA DNA -5 184 140 2028 123 3 0 chr2 9007373 9007675 -241680179 + AluSx SINE Alu 1 303 -9 474 78 0 117 chr2 9007675 9007736 -241680118 - MER53 DNA DNA -49 140 94 2137 122 0 3 chr2 9007864 9008175 -241679679 + AluSq SINE Alu 1 310 -3 853 218 132 0 chr2 9008262 9008459 -241679395 - MER58A DNA MER1_type -1 223 1 398 329 43 69 chr2 9009133 9009316 -241678538 - L2 LINE L2 -29 3284 3109 2635 166 25 52 chr2 9009316 9009839 -241678015 + LTR54 LTR ERV1 2 510 0 398 329 43 69 chr2 9009839 9009932 -241677922 - L2 LINE L2 -204 3109 3015 243 304 108 0 chr2 9010001 9010103 -241677751 - LTR33A LTR ERVL 0 523 411 2246 119 0 0 chr2 9010107 9010419 -241677435 + AluSq SINE Alu 1 312 -1 397 295 12 21 chr2 9010668 9010840 -241677014 + L1ME LINE L1 5263 5428 -749 1042 125 82 86 chr2 9010849 9010890 -241676964 - MLT2B3 LTR ERVL 0 554 514 1959 166 17 39 chr2 9010890 9011246 -241676608 + MER7A DNA MER2_type 1 346 0 1042 125 82 86 chr2 9011246 9011436 -241676418 - MLT2B3 LTR ERVL -40 514 324 198 313 0 73 chr2 9011614 9011710 -241676144 + MIR SINE MIR 172 260 -2 273 318 11 0 chr2 9011778 9011866 -241675988 + L2 LINE L2 3183 3271 -1 229 264 41 58 chr2 9012113 9012234 -241675620 + L2 LINE L2 1580 1698 -1616 457 270 8 0 chr2 9012248 9012374 -241675480 + L2 LINE L2 2246 2372 -942 184 208 69 14 chr2 9012439 9012511 -241675343 + L2 LINE L2 2837 2912 -402 386 336 8 0 chr2 9012597 9012722 -241675132 + L1ME LINE L1 5596 5721 -449 854 267 44 4 chr2 9012893 9013144 -241674710 + MIR SINE MIR 2 262 0 330 244 61 0 chr2 9013231 9013313 -241674541 + MIR SINE MIR 96 182 -80 472 225 17 33 chr2 9013460 9013580 -241674274 - MIR3 SINE MIR -8 200 83 609 115 10 39 chr2 9013803 9013907 -241673947 + L1MA10 LINE L1 6234 6334 0 1201 40 20 0 chr2 9013915 9014103 -241673751 + L1PA2 LINE L1 6002 6155 0 197 329 264 0 chr2 9014166 9014306 -241673548 - MIR SINE MIR -10 252 76 1888 116 36 7 chr2 9014390 9014693 -241673161 + AluJb SINE Alu 1 312 0 285 307 73 13 chr2 9014972 9015122 -241672732 - MIR3 SINE MIR -7 201 43 653 238 54 18 chr2 9015182 9015350 -241672504 + MER5B DNA MER1_type 5 178 0 2380 83 0 0 chr2 9015459 9015761 -241672093 - AluSx SINE Alu -10 302 1 330 329 37 30 chr2 9016050 9016214 -241671640 - MIR SINE MIR -78 184 20 276 270 167 24 chr2 9016998 9017124 -241670730 + MIR3 SINE MIR 18 161 -47 262 358 58 0 chr2 9017122 9017242 -241670612 + MIR3 SINE MIR 69 195 -13 * 1206 58 0 0 chr2 9018575 9018730 -241669124 + (TTCCC)n Simple_repeat Simple_repeat 3 157 0 2148 92 7 29 chr2 9020014 9020320 -241667534 + AluSx SINE Alu 1 299 -13 1143 138 0 11 chr2 9021620 9021801 -241666053 - AluSp SINE Alu -1 312 134 2112 100 38 0 chr2 9021802 9022092 -241665762 - AluSq SINE Alu -10 303 3 1203 170 55 103 chr2 9022106 9022126 -241665728 + MLT1B LTR MaLR 1 20 -370 2190 178 3 11 chr2 9022126 9022492 -241665362 + MLT1A1 LTR MaLR 1 363 -2 1203 170 55 103 chr2 9022492 9022800 -241665054 + MLT1B LTR MaLR 20 313 -77 1021 172 91 5 chr2 9022826 9023047 -241664807 + MLT2C2 LTR ERVL 215 454 -10 212 0 0 35 chr2 9023731 9023760 -241664094 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 183 279 162 0 chr2 9023803 9023871 -241663983 + L2 LINE L2 2716 2794 -520 185 193 0 18 chr2 9027624 9027681 -241660173 + (CA)n Simple_repeat Simple_repeat 2 57 0 2090 84 39 0 chr2 9028340 9028624 -241659230 + AluSc SINE Alu 1 295 -14 1957 123 3 0 chr2 9028770 9029081 -241658773 - AluSx SINE Alu 0 312 1 961 267 90 15 chr2 9029402 9029814 -241658040 + MLT1C LTR MaLR 7 449 -18 2239 116 0 0 chr2 9030603 9030971 -241656883 + AluSq SINE Alu 1 368 0 231 114 0 0 chr2 9034155 9034190 -241653664 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 411 21 0 0 chr2 9034327 9034375 -241653479 + (TG)n Simple_repeat Simple_repeat 1 48 0 186 71 0 0 chr2 9034377 9034405 -241653449 + (GA)n Simple_repeat Simple_repeat 2 29 0 1672 98 0 45 chr2 9034418 9034663 -241653191 - AluSq SINE Alu -79 234 1 1622 188 24 3 chr2 9034856 9035148 -241652706 - AluJb SINE Alu -14 298 1 2075 95 0 7 chr2 9035231 9035515 -241652339 + AluSq SINE Alu 1 282 -31 1333 225 186 19 chr2 9035515 9035987 -241651867 + L1ME3A LINE L1 5592 6142 -28 410 256 47 16 chr2 9036080 9036209 -241651645 + MLT1J2 LTR MaLR 253 385 -65 198 103 0 0 chr2 9036244 9036273 -241651581 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 847 235 57 4 chr2 9036406 9036653 -241651201 + L1MC4a LINE L1 5804 6063 -1745 584 167 28 0 chr2 9036877 9036985 -241650869 - L1MB5 LINE L1 -249 5925 5815 2048 134 0 0 chr2 9037200 9037491 -241650363 - AluSp SINE Alu -22 291 1 1559 248 62 12 chr2 9037612 9038044 -241649810 + MLT1C LTR MaLR 6 459 -8 701 304 45 20 chr2 9038119 9038366 -241649488 + MIR SINE MIR 9 261 -1 367 322 122 6 chr2 9039517 9039697 -241648157 + MIR SINE MIR 35 235 -27 675 179 0 7 chr2 9039701 9039877 -241647977 - AluJo SINE Alu -91 221 14 1175 240 118 48 chr2 9040246 9040704 -241647150 - MLT1F1 LTR MaLR -8 559 70 826 199 33 50 chr2 9041214 9041294 -241646560 - MER45A DNA AcHobo -1403 178 98 1803 157 7 13 chr2 9041294 9041593 -241646261 + AluJb SINE Alu 1 297 -15 826 199 33 50 chr2 9041593 9041693 -241646161 - MER45A DNA AcHobo -1483 98 1 234 0 0 0 chr2 9042065 9042091 -241645763 + (TATG)n Simple_repeat Simple_repeat 3 28 0 747 203 38 0 chr2 9042093 9042226 -241645628 - FRAM SINE Alu -30 146 9 249 111 205 94 chr2 9042228 9042261 -241645593 + Charlie4 DNA MER1_type 1825 1853 -108 1507 205 93 37 chr2 9042261 9042636 -241645218 + MSTD LTR MaLR 1 396 0 249 111 205 94 chr2 9042636 9042719 -241645135 + Charlie4 DNA MER1_type 1853 1954 -7 296 309 91 30 chr2 9043102 9043267 -241644587 - MIR SINE MIR -33 229 55 211 369 99 19 chr2 9043538 9043953 -241643901 - L2 LINE L2 -411 2903 2456 916 231 39 21 chr2 9044431 9044665 -241643189 + MIR SINE MIR 12 249 -13 222 200 0 0 chr2 9044634 9044684 -241643170 + L2 LINE L2 3264 3313 0 * 249 283 0 0 chr2 9044892 9044952 -241642902 + L2 LINE L2 2999 3058 -214 237 339 73 0 chr2 9045814 9045938 -241641916 + L2 LINE L2 2393 2525 -789 884 236 15 0 chr2 9045940 9046135 -241641719 + MER20 DNA MER1_type 1 198 -21 328 290 186 41 chr2 9046153 9046320 -241641534 + L2 LINE L2 2519 2660 -653 2265 102 0 10 chr2 9046320 9046633 -241641221 - AluSg SINE Alu 0 310 1 328 290 186 41 chr2 9046633 9046918 -241640936 + L2 LINE L2 2660 3043 -270 243 0 0 0 chr2 9047640 9047667 -241640187 + (CA)n Simple_repeat Simple_repeat 2 28 0 460 236 73 37 chr2 9048577 9048784 -241639070 + L1PA8A LINE L1 5384 5597 -569 340 232 189 0 chr2 9048811 9049047 -241638807 + L1ME2 LINE L1 5894 6331 -3 386 312 115 35 chr2 9049346 9049686 -241638168 + L2 LINE L2 2892 3258 -14 2522 147 22 15 chr2 9049716 9049760 -241638094 + MLT1C LTR MaLR 1 43 -424 2225 169 8 13 chr2 9049760 9050150 -241637704 + MLT1B LTR MaLR 3 390 0 2522 147 22 15 chr2 9050150 9050567 -241637287 + MLT1C LTR MaLR 43 465 -2 202 358 32 0 chr2 9051317 9051412 -241636442 - L3 LINE CR1 -46 1531 1434 2453 150 55 5 chr2 9052735 9053174 -241634680 - MER65C LTR ERV1 0 461 1 393 292 134 61 chr2 9054247 9054641 -241633213 - L2 LINE L2 -18 3254 2832 525 135 31 0 chr2 9054681 9054777 -241633077 - L1MC2 LINE L1 -3 6341 6243 283 167 19 0 chr2 9054777 9054831 -241633023 - L1MC1 LINE L1 -131 6202 6148 244 270 40 50 chr2 9054967 9055067 -241632787 + L2 LINE L2 3155 3253 -19 347 285 0 35 chr2 9055068 9055212 -241632642 + GA-rich Low_complexity Low_complexity 3 141 0 262 340 59 20 chr2 9055218 9055371 -241632483 - L2 LINE L2 -592 2722 2564 702 287 48 5 chr2 9057249 9057437 -241630417 + MER91A DNA MER1_type 1 196 0 560 317 32 32 chr2 9058018 9058239 -241629615 + L3 LINE CR1 538 758 -819 193 305 220 44 chr2 9059251 9059592 -241628262 + L3 LINE CR1 1091 1491 -86 302 359 0 0 chr2 9060153 9060270 -241627584 + (CA)n Simple_repeat Simple_repeat 1 117 0 180 282 105 32 chr2 9060270 9060394 -241627460 - L2 LINE L2 -176 3096 2964 200 284 109 38 chr2 9060573 9060784 -241627070 + L2 LINE L2 2560 2785 -529 271 140 263 0 chr2 9060850 9060907 -241626947 + Tigger2 DNA MER2_type 1 72 -2646 2126 146 39 62 chr2 9060929 9061282 -241626572 + Tigger2 DNA MER2_type 2296 2639 -79 1898 157 0 7 chr2 9061282 9061575 -241626279 - AluJo SINE Alu -16 296 6 2126 146 39 62 chr2 9061575 9061654 -241626200 + Tigger2 DNA MER2_type 2639 2718 0 443 260 35 65 chr2 9061668 9061837 -241626017 - MIR SINE MIR -79 183 20 245 230 115 44 chr2 9061849 9061962 -241625892 - MER5A DNA MER1_type -2 187 67 284 309 43 64 chr2 9064212 9064400 -241623454 + MIR SINE MIR 8 191 -71 181 214 176 61 chr2 9064410 9064541 -241623313 - L2 LINE L2 -4 3268 3123 460 303 37 21 chr2 9064714 9064902 -241622952 - MIR SINE MIR -70 192 2 254 252 41 57 chr2 9065334 9065457 -241622397 + MIR3 SINE MIR 10 130 -78 243 0 0 0 chr2 9066158 9066185 -241621669 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 232 313 125 39 chr2 9066185 9066393 -241621461 - L2 LINE L2 -17 3255 3030 300 195 52 13 chr2 9066465 9066542 -241621312 - MIR SINE MIR -60 148 69 214 286 187 0 chr2 9067923 9068014 -241619840 - MIR SINE MIR -66 196 89 1898 174 52 17 chr2 9068062 9068469 -241619385 - MLT1C LTR MaLR -44 423 3 307 283 71 20 chr2 9068832 9068931 -241618923 + MIR SINE MIR 42 145 -117 1865 128 0 7 chr2 9069131 9069405 -241618449 + AluSx SINE Alu 39 310 -2 183 337 61 10 chr2 9069767 9069865 -241617989 + MIR SINE MIR 34 136 -72 298 219 176 34 chr2 9070592 9070711 -241617143 + MIR3 SINE MIR 4 139 -69 1059 96 6 11 chr2 9071027 9071205 -241616649 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 2051 117 36 0 chr2 9071386 9071667 -241616187 + AluSg SINE Alu 1 291 -19 265 268 0 0 chr2 9071676 9071758 -241616096 - L1 LINE L1 -2763 3383 3302 717 203 62 0 chr2 9071806 9071934 -241615920 - FRAM SINE Alu -41 135 1 325 241 36 0 chr2 9071935 9072018 -241615836 - L1 LINE L1 -2884 3262 3177 2030 105 0 0 chr2 9072037 9072294 -241615560 + AluSx SINE Alu 1 257 -55 597 205 0 8 chr2 9072294 9072405 -241615449 - AluSq/x SINE Alu -194 118 9 300 242 121 0 chr2 9072432 9072523 -241615331 - L1 LINE L1 -2978 3168 3067 737 301 60 25 chr2 9072533 9072815 -241615039 + L2 LINE L2 3021 3312 -1 689 123 61 0 chr2 9072893 9073007 -241614847 - FLAM_C SINE Alu -20 123 3 214 277 161 9 chr2 9073029 9073141 -241614713 - MIR3 SINE MIR -69 139 11 1846 150 3 26 chr2 9074186 9074493 -241613361 - AluJo SINE Alu -12 300 1 340 242 33 44 chr2 9074744 9074835 -241613019 + L2 LINE L2 3183 3272 0 2243 108 3 3 chr2 9075736 9076033 -241611821 + AluSx SINE Alu 1 297 -15 202 267 208 10 chr2 9076166 9076267 -241611587 - MIR3 SINE MIR -85 123 3 452 178 0 11 chr2 9076549 9076639 -241611215 + L1MEc LINE L1 35 123 -6273 566 289 73 34 chr2 9076646 9077027 -241610827 - Charlie1a DNA MER1_type -964 491 96 281 214 155 0 chr2 9077792 9077876 -241609978 - L1ME4a LINE L1 -3 6118 6022 301 296 78 0 chr2 9077973 9078088 -241609766 - L1ME4a LINE L1 -280 5841 5718 2343 100 3 0 chr2 9078420 9078719 -241609135 + AluSp SINE Alu 1 300 -13 219 238 88 25 chr2 9079159 9079239 -241608615 - L2 LINE L2 -2 3311 3227 21 0 0 0 chr2 9080042 9080063 -241607791 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 9080063 9080092 -241607762 + (TG)n Simple_repeat Simple_repeat 2 30 0 190 271 21 0 chr2 9080340 9080388 -241607466 + MIR SINE MIR 101 149 -113 200 347 14 0 chr2 9080851 9080923 -241606931 + MIR SINE MIR 161 233 -29 916 207 35 0 chr2 9082117 9082291 -241605563 - MER5A DNA MER1_type 0 189 10 1957 159 0 0 chr2 9082532 9082827 -241605027 - AluSx SINE Alu -17 295 1 303 301 147 44 chr2 9083307 9083443 -241604411 + MIR SINE MIR 25 174 -88 1879 165 26 3 chr2 9083493 9083796 -241604058 - AluJb SINE Alu -2 310 1 285 333 93 13 chr2 9083830 9083980 -241603874 + MIR3 SINE MIR 30 191 -17 381 115 0 0 chr2 9084079 9084131 -241603723 + MER5A DNA MER1_type 138 189 0 29 28 0 0 chr2 9084755 9084791 -241603063 + AT_rich Low_complexity Low_complexity 1 36 0 184 268 0 0 chr2 9084828 9084869 -241602985 + L2 LINE L2 3007 3047 -225 2391 99 0 6 chr2 9085016 9085330 -241602524 - AluSq SINE Alu -1 312 1 1898 127 19 61 chr2 9085356 9085444 -241602410 - MER47A DNA MER2_type -1957 366 276 1870 149 7 21 chr2 9085444 9085732 -241602122 + AluJo SINE Alu 13 296 -16 1898 127 19 61 chr2 9085732 9086005 -241601849 - MER47A DNA MER2_type -2047 276 20 281 267 110 27 chr2 9087072 9087218 -241600636 - L2 LINE L2 -188 3125 2968 254 211 239 55 chr2 9087215 9087324 -241600530 + MER5A DNA MER1_type 61 189 0 * 1748 189 116 193 chr2 9087324 9087596 -241600258 - L2 LINE L2 -702 2612 2320 1734 150 44 78 chr2 9087596 9087982 -241599872 - THE1C LTR MaLR -2 373 1 10039 115 19 46 chr2 9087982 9089422 -241598432 - THE1C-int LTR MaLR 0 1580 189 1951 161 7 3 chr2 9089422 9089721 -241598133 - AluSx SINE Alu -12 300 1 10039 115 19 46 chr2 9089721 9089903 -241597951 - THE1C-int LTR MaLR -1391 189 3 1978 126 60 30 chr2 9089905 9090269 -241597585 - THE1C LTR MaLR 0 375 1 1748 189 116 193 chr2 9090269 9090377 -241597477 - L2 LINE L2 -994 2320 2205 664 193 0 7 chr2 9090377 9090517 -241597337 - MER104 DNA Tc2 -7 173 35 1748 189 116 193 chr2 9090517 9090994 -241596860 - L2 LINE L2 -1109 2205 1688 42371 42 4 1 chr2 9090998 9097126 -241590728 + L1PA4 LINE L1 2 6149 -6 796 237 67 22 chr2 9097126 9097396 -241590458 - L2 LINE L2 -1612 1702 1421 193 299 16 118 chr2 9098488 9098615 -241589239 - MIR3 SINE MIR -16 192 79 237 47 0 70 chr2 9099232 9099275 -241588579 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 2201 111 4 0 chr2 9099275 9099555 -241588299 - AluSg SINE Alu -29 281 1 595 144 0 0 chr2 9099754 9099844 -241588010 + AluSg/x SINE Alu 206 295 -17 35 88 0 0 chr2 9099994 9100085 -241587769 + AT_rich Low_complexity Low_complexity 1 91 0 1613 170 14 14 chr2 9100172 9100460 -241587394 + AluJb SINE Alu 9 296 -16 1201 231 128 79 chr2 9100490 9101034 -241586820 - HAL1 LINE L1 -110 2397 1814 2298 94 0 10 chr2 9101034 9101341 -241586513 - AluY SINE Alu -7 304 1 1201 231 128 79 chr2 9101341 9101455 -241586399 - HAL1 LINE L1 -693 1814 1707 2405 251 84 46 chr2 9101499 9102005 -241585849 - HAL1 LINE L1 -1604 903 349 2201 113 3 0 chr2 9102005 9102305 -241585549 + AluY SINE Alu 1 301 -10 2405 251 84 46 chr2 9102305 9102668 -241585186 - HAL1 LINE L1 -2158 349 1 408 184 8 5 chr2 9102764 9102896 -241584958 - MER5A DNA MER1_type 0 189 1 381 296 81 6 chr2 9102924 9103096 -241584758 - L1ME LINE L1 -317 5804 5620 499 228 101 7 chr2 9103114 9103263 -241584591 - L2 LINE L2 -32 3281 3119 1994 274 72 32 chr2 9103327 9104040 -241583814 + L2 LINE L2 2120 2860 -454 486 86 0 14 chr2 9104054 9104124 -241583730 - THE1B LTR MaLR -53 311 243 846 231 156 60 chr2 9104160 9104403 -241583451 + L2 LINE L2 2871 3089 -224 751 173 16 0 chr2 9104403 9104530 -241583324 - FLAM_A SINE Alu -4 129 1 846 231 156 60 chr2 9104530 9104689 -241583165 + L2 LINE L2 3089 3312 -1 2116 112 20 20 chr2 9104918 9105223 -241582631 - AluSx SINE Alu -7 305 1 2532 113 6 6 chr2 9105367 9105731 -241582123 - THE1B LTR MaLR 0 364 1 194 286 162 32 chr2 9106133 9106287 -241581567 + MIR SINE MIR 89 262 0 1006 232 46 13 chr2 9106636 9106873 -241580981 + MIR SINE MIR 18 262 0 1066 299 84 32 chr2 9107089 9107615 -241580239 + L2 LINE L2 2174 2726 -588 218 189 0 19 chr2 9107780 9107833 -241580021 + CT-rich Low_complexity Low_complexity 1 52 0 771 224 13 13 chr2 9108018 9108174 -241579680 + MER5A DNA MER1_type 6 161 -28 644 166 14 90 chr2 9108202 9108347 -241579507 - AluJo SINE Alu -178 134 1 205 205 0 0 chr2 9108347 9108386 -241579468 + MER5A DNA MER1_type 151 189 0 847 300 84 33 chr2 9108606 9108759 -241579095 - L2 LINE L2 -2 3311 3167 366 83 250 0 chr2 9108759 9108819 -241579035 - MADE1 DNA Mariner -3 77 3 847 300 84 33 chr2 9108819 9108996 -241578858 - L2 LINE L2 -146 3167 3000 2572 200 33 13 chr2 9108996 9109535 -241578319 - MER44D DNA MER2_type 0 605 1 847 300 84 33 chr2 9109535 9109719 -241578135 - L2 LINE L2 -313 3000 2776 584 182 53 28 chr2 9109720 9109870 -241577984 - L1ME2 LINE L1 0 6165 6020 694 221 121 26 chr2 9109888 9110122 -241577732 - L2 LINE L2 -550 2764 2505 185 306 94 24 chr2 9110122 9110207 -241577647 - MER5C DNA MER1_type 0 324 234 225 0 0 0 chr2 9110386 9110411 -241577443 + (T)n Simple_repeat Simple_repeat 1 25 0 2051 125 7 14 chr2 9111011 9111307 -241576547 + AluSx SINE Alu 1 294 -18 701 258 44 18 chr2 9111478 9111703 -241576151 + L2 LINE L2 3083 3313 0 2108 79 23 0 chr2 9112069 9112335 -241575519 - AluSg SINE Alu -16 294 23 353 286 0 0 chr2 9112336 9112413 -241575441 - FLAM_A SINE Alu -50 83 7 21 0 0 0 chr2 9112908 9112929 -241574925 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 9113062 9113083 -241574771 + AT_rich Low_complexity Low_complexity 1 21 0 4774 172 29 14 chr2 9113841 9114728 -241573126 - MER52A LTR ERV1 0 1755 881 358 198 0 99 chr2 9114726 9114847 -241573007 + MER52A LTR ERV1 125 233 -1522 * 262 316 51 35 chr2 9115115 9115316 -241572538 + MIR SINE MIR 32 230 -32 407 291 29 0 chr2 9115897 9116000 -241571854 - MIR3 SINE MIR -6 202 97 180 197 56 70 chr2 9115998 9116069 -241571785 + MIR SINE MIR 141 210 -52 * 289 119 0 0 chr2 9116255 9116297 -241571557 - tRNA-Cys-TGC tRNA tRNA -31 44 3 2355 83 0 0 chr2 9116744 9117034 -241570820 + AluSc SINE Alu 1 290 -19 1585 217 70 9 chr2 9117276 9117793 -241570061 - L1MEc LINE L1 -3563 2652 2141 1071 179 21 56 chr2 9117795 9118029 -241569825 - AluJo SINE Alu 0 312 87 4802 258 92 24 chr2 9118029 9118750 -241569104 - L1MEc LINE L1 -4248 2148 1478 2292 103 6 3 chr2 9118750 9119062 -241568792 - AluSq SINE Alu 0 313 1 4802 258 92 24 chr2 9119062 9120320 -241567534 - L1MEc LINE L1 -4918 1478 34 3608 144 104 17 chr2 9120577 9120733 -241567121 - L1MA7 LINE L1 -2 6289 6148 2255 94 0 3 chr2 9120733 9121031 -241566823 - AluSp SINE Alu -16 297 1 3608 144 104 17 chr2 9121031 9121058 -241566796 - L1MA7 LINE L1 -143 6148 6125 4235 168 56 92 chr2 9121058 9122334 -241565520 + Tigger3b DNA MER2_type 1 1230 -1 3608 144 104 17 chr2 9122334 9122900 -241564954 - L1MA7 LINE L1 -166 6125 5474 499 203 4 144 chr2 9123058 9123294 -241564560 - L1MC4 LINE L1 -3 8039 7837 492 247 43 19 chr2 9123331 9123493 -241564361 + L1ME3A LINE L1 5721 5886 -276 1021 128 7 7 chr2 9123502 9123651 -241564203 + AluJb SINE Alu 137 285 -27 302 338 85 52 chr2 9123653 9123925 -241563929 + L1ME3A LINE L1 5860 6140 -30 2079 126 0 3 chr2 9125182 9125476 -241562378 + AluJb SINE Alu 6 298 -14 207 0 0 0 chr2 9125773 9125796 -241562058 + (T)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr2 9126580 9126602 -241561252 + (A)n Simple_repeat Simple_repeat 1 22 0 488 272 83 18 chr2 9128138 9128307 -241559547 - MER5A DNA MER1_type -1 188 9 2146 154 25 18 chr2 9128950 9129347 -241558507 - L1MB3 LINE L1 0 6183 5784 961 185 100 0 chr2 9129420 9129620 -241558234 - L1MB3 LINE L1 -392 5791 5572 314 255 121 25 chr2 9129626 9129783 -241558071 - L1ME4a LINE L1 -1 6120 5949 261 315 27 27 chr2 9129787 9129933 -241557921 - L1ME4a LINE L1 -196 5925 5780 362 276 105 13 chr2 9129934 9130086 -241557768 + L1ME4a LINE L1 5738 5903 -218 363 314 189 30 chr2 9130146 9130211 -241557643 - L2 LINE L2 -561 2753 2700 1931 167 0 6 chr2 9130211 9130522 -241557332 + AluJb SINE Alu 1 309 -3 363 314 189 30 chr2 9130522 9130863 -241556991 - L2 LINE L2 -614 2700 2282 339 250 76 8 chr2 9130900 9131032 -241556822 + L1ME4a LINE L1 5974 6114 -7 292 225 0 50 chr2 9131047 9131144 -241556710 + L1ME4a LINE L1 5692 5771 -350 21 36 0 0 chr2 9131214 9131242 -241556612 + AT_rich Low_complexity Low_complexity 1 28 0 1927 235 56 43 chr2 9132197 9132802 -241555052 - L1ME3A LINE L1 0 6170 5558 2193 64 7 4 chr2 9133039 9133343 -241554511 - AluY SINE Alu 0 305 1 4348 116 49 1 chr2 9134070 9134745 -241553109 - L1PA15 LINE L1 0 6165 5459 24 0 0 0 chr2 9135810 9135834 -241552020 + AT_rich Low_complexity Low_complexity 1 24 0 283 284 71 0 chr2 9136683 9136810 -241551044 + L1ME4a LINE L1 5968 6103 -18 1714 177 0 37 chr2 9136846 9137145 -241550709 - AluJo SINE Alu -24 288 1 212 260 39 39 chr2 9137785 9137862 -241549992 - MIR SINE MIR -166 96 20 2444 80 0 6 chr2 9137991 9138304 -241549550 - AluY SINE Alu 0 311 1 293 191 0 0 chr2 9138549 9138596 -241549258 + L2 LINE L2 3218 3264 -8 238 240 0 0 chr2 9138884 9138934 -241548920 + L2 LINE L2 3263 3312 -1 189 229 47 151 chr2 9139318 9139576 -241548278 - L2 LINE L2 -230 3042 2812 1010 224 18 23 chr2 9139653 9139872 -241547982 - MIR SINE MIR -40 222 5 396 203 98 41 chr2 9140080 9140203 -241547651 - MIR SINE MIR -63 145 28 224 266 8 113 chr2 9141822 9141946 -241545908 + L2 LINE L2 2926 3036 -236 269 282 14 0 chr2 9142095 9142166 -241545688 + MIR SINE MIR 183 254 -8 284 301 32 41 chr2 9142179 9142302 -241545552 + L2 LINE L2 3151 3272 0 213 373 0 0 chr2 9142460 9142519 -241545335 + L3 LINE CR1 1504 1562 -15 196 293 69 0 chr2 9142664 9142722 -241545132 - MIR SINE MIR -59 149 88 535 175 0 0 chr2 9143363 9143460 -241544394 - L1MD3 LINE L1 -158 7837 7741 328 263 25 24 chr2 9143741 9143855 -241543999 + MIR SINE MIR 9 130 -78 282 109 91 0 chr2 9145123 9145178 -241542676 - L1MC/D LINE L1 -780 5462 5403 2856 212 111 11 chr2 9145192 9146181 -241541673 + L1ME1 LINE L1 5072 6158 -8 2226 98 6 28 chr2 9146786 9147103 -241540751 - AluSp SINE Alu -3 310 1 223 296 56 0 chr2 9147418 9147472 -241540382 - L2 LINE L2 -13 3300 3244 219 330 97 10 chr2 9147600 9147703 -241540151 - L2 LINE L2 -2 3270 3159 191 236 135 67 chr2 9147705 9147748 -241540106 - MIR3 SINE MIR -105 103 64 2758 10 0 0 chr2 9147748 9148047 -241539807 + AluYa5 SINE Alu 1 299 -12 191 236 135 67 chr2 9148047 9148092 -241539762 - MIR3 SINE MIR -144 64 9 467 228 0 78 chr2 9149377 9149557 -241538297 - L1MD3 LINE L1 -70 7925 7548 1577 242 82 50 chr2 9150081 9150717 -241537137 - L1MC4 LINE L1 -162 7880 7225 1869 149 4 4 chr2 9151074 9151349 -241536505 - AluJo SINE Alu -37 275 1 201 250 175 25 chr2 9151843 9151923 -241535931 + MIR3 SINE MIR 76 167 -41 315 345 61 20 chr2 9152045 9152193 -241535661 + MIR SINE MIR 12 165 -97 * 1463 224 49 75 chr2 9152188 9152776 -241535078 + L2 LINE L2 2726 3313 0 236 198 229 62 chr2 9152780 9152876 -241534978 + MIR SINE MIR 151 262 0 2085 120 24 0 chr2 9152922 9153214 -241534640 + AluSx SINE Alu 3 301 -11 2474 68 3 3 chr2 9153354 9153650 -241534204 + AluSp SINE Alu 1 296 -17 35 24 0 0 chr2 9155052 9155094 -241532760 + AT_rich Low_complexity Low_complexity 1 42 0 2409 72 7 0 chr2 9155117 9155409 -241532445 + AluY SINE Alu 1 294 -17 301 207 207 12 chr2 9155411 9155493 -241532361 - MIR SINE MIR -100 162 65 204 191 0 32 chr2 9155494 9155557 -241532297 + T-rich Low_complexity Low_complexity 1 61 0 236 380 0 25 chr2 9155995 9156158 -241531696 + (CCCG)n Simple_repeat Simple_repeat 2 160 0 383 333 0 27 chr2 9156192 9156375 -241531479 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 * 495 314 0 30 chr2 9156351 9157147 -241530707 + (CCCG)n Simple_repeat Simple_repeat 1 771 0 191 277 0 21 chr2 9157692 9157739 -241530115 - MIR SINE MIR -144 64 19 2316 104 0 13 chr2 9158538 9158837 -241529017 + AluSq SINE Alu 2 296 -17 555 313 61 39 chr2 9159302 9159714 -241528140 + L1MEc LINE L1 778 1198 -5940 862 208 66 4 chr2 9159870 9160093 -241527761 - L1ME1 LINE L1 0 6178 5948 492 286 46 14 chr2 9160117 9160378 -241527476 + L1MEc LINE L1 1331 1467 -5392 2228 113 0 0 chr2 9160378 9160670 -241527184 + AluSx SINE Alu 1 292 -20 492 286 46 14 chr2 9160670 9160697 -241527157 + L1MEc LINE L1 1467 1492 -5367 2228 118 7 0 chr2 9161058 9161345 -241526509 - AluSx SINE Alu -23 289 1 676 298 106 12 chr2 9161520 9161842 -241526012 - L1ME1 LINE L1 -234 5887 5536 201 279 0 40 chr2 9162687 9162990 -241524864 + (CGGG)n Simple_repeat Simple_repeat 1 290 0 426 317 0 28 chr2 9163148 9163328 -241524526 + (CGGG)n Simple_repeat Simple_repeat 4 178 0 360 344 0 32 chr2 9163343 9163529 -241524325 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 289 333 0 32 chr2 9163604 9163790 -241524064 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 440 324 0 27 chr2 9163993 9164178 -241523676 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 279 359 0 28 chr2 9164278 9164459 -241523395 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 383 352 0 29 chr2 9164783 9165249 -241522605 + (CGGG)n Simple_repeat Simple_repeat 1 452 0 439 323 0 28 chr2 9165278 9165649 -241522205 + (CGGG)n Simple_repeat Simple_repeat 1 360 0 308 344 0 27 chr2 9165672 9165855 -241521999 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 240 356 0 28 chr2 9165824 9166004 -241521850 + (CGGG)n Simple_repeat Simple_repeat 2 176 0 * 348 297 0 30 chr2 9166120 9166285 -241521569 + (CCCG)n Simple_repeat Simple_repeat 2 161 0 390 306 0 38 chr2 9166312 9166495 -241521359 + (CCCG)n Simple_repeat Simple_repeat 1 176 0 394 340 0 30 chr2 9166550 9167360 -241520494 + (CCCG)n Simple_repeat Simple_repeat 1 785 0 477 297 0 32 chr2 9167378 9167563 -241520291 + (CCCG)n Simple_repeat Simple_repeat 2 180 0 763 239 78 58 chr2 9168974 9169334 -241518520 - L1ME2 LINE L1 -9 6155 5789 3160 244 53 41 chr2 9169334 9170363 -241517491 + L1MC4 LINE L1 227 1268 -5274 1286 165 134 15 chr2 9170611 9170732 -241517122 + AluJo SINE Alu 1 106 -206 321 26 0 0 chr2 9170732 9170770 -241517084 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1286 165 134 15 chr2 9170770 9170909 -241516945 + AluJo SINE Alu 106 292 -20 659 229 42 49 chr2 9171380 9171668 -241516186 + pTR5 LTR ERV1 743 1028 -1410 4685 104 20 40 chr2 9171851 9172553 -241515301 + LTR12 LTR ERV1 1 688 0 1129 223 34 10 chr2 9172600 9172956 -241514898 - ERVL-B2 LTR ERVL -5288 366 6 688 140 171 49 chr2 9172967 9173131 -241514723 - MLT2B2 LTR ERVL -12 503 320 340 193 181 0 chr2 9173165 9173248 -241514606 - LTR33 LTR ERVL -422 99 2 329 238 49 25 chr2 9173319 9173441 -241514413 - LTR33 LTR ERVL 0 521 397 474 305 5 63 chr2 9173708 9173931 -241513923 - L2 LINE L2 -27 3286 3077 849 289 48 38 chr2 9173934 9174328 -241513526 - ERVL LTR ERVL -2795 2969 2572 581 288 81 0 chr2 9174612 9174772 -241513082 - L2 LINE L2 -544 2770 2598 243 320 72 0 chr2 9174958 9175055 -241512799 - L2 LINE L2 -6 3266 3163 27 0 0 0 chr2 9176681 9176708 -241511146 + AT_rich Low_complexity Low_complexity 1 27 0 692 276 35 43 chr2 9177571 9177803 -241510051 + MIR SINE MIR 33 262 0 1764 188 0 7 chr2 9177844 9178132 -241509722 + AluJo SINE Alu 13 298 -14 207 170 43 0 chr2 9178234 9178281 -241509573 + A-rich Low_complexity Low_complexity 4 52 0 413 188 1 79 chr2 9179208 9179318 -241508536 + L1MC4 LINE L1 2206 7201 -1339 287 646 0 0 chr2 9179326 9179504 -241508350 + (TA)n Simple_repeat Simple_repeat 2 179 0 216 0 0 0 chr2 9179504 9179528 -241508326 + (CA)n Simple_repeat Simple_repeat 1 24 0 2381 81 13 3 chr2 9180103 9180412 -241507442 - AluSx SINE Alu 0 312 1 502 281 79 35 chr2 9180586 9180814 -241507040 + L2 LINE L2 3072 3309 -4 267 300 108 23 chr2 9182181 9182311 -241505543 - MIR3 SINE MIR -46 162 22 1829 140 48 24 chr2 9182350 9182642 -241505212 - AluJb SINE Alu -13 299 1 378 0 0 0 chr2 9184053 9184095 -241503759 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1050 182 0 0 chr2 9184095 9184271 -241503583 + FRAM SINE Alu 1 174 -2 448 189 56 0 chr2 9184399 9184489 -241503365 + L1MC4 LINE L1 7472 7566 -974 1426 241 110 3 chr2 9184490 9185072 -241502782 + L1MC4 LINE L1 7713 8398 -142 272 180 0 0 chr2 9185073 9185123 -241502731 + L1MC4 LINE L1 8481 8530 -10 189 0 0 0 chr2 9185130 9185151 -241502703 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 651 306 5 5 chr2 9185376 9185575 -241502279 + MER58A DNA MER1_type 26 224 0 21 0 0 0 chr2 9186402 9186423 -241501431 + AT_rich Low_complexity Low_complexity 1 21 0 2380 90 3 7 chr2 9187955 9188256 -241499598 + AluSq SINE Alu 1 300 -13 2147 114 13 7 chr2 9188556 9188854 -241499000 + AluSx SINE Alu 1 300 -12 963 281 97 45 chr2 9189530 9190017 -241497837 + L1MEc LINE L1 37 548 -5848 475 177 104 10 chr2 9190203 9190299 -241497555 - AluSg1 SINE Alu -201 108 4 778 263 7 58 chr2 9190303 9190332 -241497522 + L1M4 LINE L1 3545 3574 -2572 1954 157 10 13 chr2 9190332 9190645 -241497209 + AluSx SINE Alu 1 312 0 778 263 7 58 chr2 9190645 9190923 -241496931 + L1M4 LINE L1 3574 3836 -2310 1473 185 49 28 chr2 9190926 9191212 -241496642 + AluJb SINE Alu 21 312 0 1289 275 56 26 chr2 9191256 9191398 -241496456 + L1M4 LINE L1 4752 4888 -1270 1930 149 3 23 chr2 9191398 9191700 -241496154 - AluSx SINE Alu -2 310 15 1289 275 56 26 chr2 9191700 9191985 -241495869 + L1M4 LINE L1 4888 5211 -947 1758 170 20 7 chr2 9191985 9192285 -241495569 + AluJo SINE Alu 1 304 -8 1289 275 56 26 chr2 9192285 9192497 -241495357 + L1M4 LINE L1 5211 5415 -743 294 227 6 3 chr2 9192498 9192563 -241495291 + AluJ/monomer SINE Alu 1 53 -250 * 830 135 0 23 chr2 9192562 9192695 -241495159 + THE1B LTR MaLR 235 364 0 792 221 181 18 chr2 9192699 9193025 -241494829 - L2 LINE L2 -1734 1580 1202 1725 249 94 50 chr2 9193046 9193512 -241494342 - Charlie7 DNA MER1_type -838 1774 1261 2653 50 0 0 chr2 9193512 9193815 -241494039 - AluY SINE Alu -8 303 1 1725 249 94 50 chr2 9193815 9194106 -241493748 - Charlie7 DNA MER1_type -1351 1261 984 2413 101 3 0 chr2 9194340 9194647 -241493207 + AluSx SINE Alu 1 308 -4 268 299 234 16 chr2 9195276 9195460 -241492394 - MIR SINE MIR 0 262 39 6722 117 26 15 chr2 9195894 9196767 -241491087 - L1MA2 LINE L1 0 6304 5442 2151 109 3 16 chr2 9196767 9197092 -241490762 - AluSc SINE Alu 0 309 1 6722 117 26 15 chr2 9197092 9198152 -241489702 - L1MA2 LINE L1 -862 5442 4342 2344 112 0 0 chr2 9198246 9198550 -241489304 - AluSx SINE Alu -8 304 1 23 33 0 0 chr2 9198602 9198632 -241489222 + AT_rich Low_complexity Low_complexity 1 30 0 2182 271 205 12 chr2 9198701 9199819 -241488035 - L2 LINE L2 -519 2795 1463 444 283 58 52 chr2 9199989 9200180 -241487674 + MIR SINE MIR 21 212 -50 265 294 92 8 chr2 9200791 9200910 -241486944 - MIR SINE MIR -64 144 16 980 78 0 0 chr2 9201243 9201559 -241486295 + AluSg SINE Alu 1 316 0 565 266 126 61 chr2 9201559 9202081 -241485773 + HAL1 LINE L1 1723 2278 -229 180 174 130 0 chr2 9202128 9202174 -241485680 + L2 LINE L2 2191 2242 -1072 1489 231 89 4 chr2 9202369 9202871 -241484983 - L1ME1 LINE L1 -11 6155 5567 512 183 16 0 chr2 9202871 9202997 -241484857 + CT-rich Low_complexity Low_complexity 3 130 0 1837 127 6 74 chr2 9203016 9203339 -241484515 - AluJo SINE Alu -6 306 6 3065 204 55 40 chr2 9203346 9203634 -241484220 - L1ME1 LINE L1 -585 5581 5299 2254 114 10 0 chr2 9203634 9203933 -241483921 - AluSx SINE Alu -10 302 1 3065 204 55 40 chr2 9203933 9204563 -241483291 - L1ME1 LINE L1 -867 5299 4637 733 179 7 57 chr2 9204563 9204703 -241483151 - FLAM_C SINE Alu 0 133 1 3065 204 55 40 chr2 9204703 9204930 -241482924 - L1ME1 LINE L1 -1529 4637 4415 204 40 0 0 chr2 9204942 9204967 -241482887 + (TG)n Simple_repeat Simple_repeat 1 25 0 285 75 0 0 chr2 9204967 9205007 -241482847 + (GA)n Simple_repeat Simple_repeat 2 41 0 2393 110 0 0 chr2 9205559 9205869 -241481985 + AluSg SINE Alu 1 310 0 22 35 0 0 chr2 9205892 9205921 -241481933 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 9206261 9206282 -241481572 + AT_rich Low_complexity Low_complexity 1 21 0 265 253 42 21 chr2 9207075 9207170 -241480684 - MIR SINE MIR -60 148 52 303 28 0 0 chr2 9207600 9207636 -241480218 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 2031 102 47 0 chr2 9207639 9207914 -241479940 - AluSq SINE Alu -25 288 1 2530 88 0 0 chr2 9207969 9208277 -241479577 - AluSx SINE Alu -4 308 1 323 280 50 0 chr2 9208500 9208600 -241479254 + MIR SINE MIR 117 221 -41 2264 108 0 22 chr2 9208692 9209006 -241478848 + AluSx SINE Alu 1 307 -5 205 292 124 18 chr2 9209127 9209240 -241478614 + MIR3 SINE MIR 69 193 -15 847 136 73 12 chr2 9209694 9209864 -241477990 - MSTC LTR MaLR -229 167 2 1378 137 5 0 chr2 9209915 9210119 -241477735 + MER2 DNA MER2_type 2 206 -139 1617 176 10 19 chr2 9210133 9210440 -241477414 - AluSx SINE Alu -8 304 1 34 34 0 17 chr2 9210440 9210468 -241477386 + AT_rich Low_complexity Low_complexity 1 28 -30 2405 86 0 3 chr2 9210468 9210771 -241477083 + AluSq SINE Alu 7 308 -5 34 34 0 17 chr2 9210771 9210801 -241477053 + AT_rich Low_complexity Low_complexity 28 58 0 256 208 57 0 chr2 9210801 9210854 -241477000 + MER2 DNA MER2_type 266 321 -24 220 385 99 0 chr2 9211060 9211273 -241476581 - MIR SINE MIR -13 249 16 204 139 0 47 chr2 9211276 9211319 -241476535 + (CCCCCG)n Simple_repeat Simple_repeat 2 42 0 873 88 0 61 chr2 9212085 9212214 -241475640 + FRAM SINE Alu 36 157 -155 2933 16 0 0 chr2 9212214 9212532 -241475322 + AluYb8 SINE Alu 1 318 0 873 88 0 61 chr2 9212532 9212549 -241475305 + FRAM SINE Alu 157 173 -3 315 123 92 15 chr2 9212589 9212654 -241475200 + MLT1C LTR MaLR 181 250 -217 2112 125 17 0 chr2 9212832 9213121 -241474733 - AluSg SINE Alu -16 294 1 766 231 43 70 chr2 9213225 9213792 -241474062 - L1MC5 LINE L1 -30 7931 7331 1955 90 128 0 chr2 9213803 9214069 -241473785 + AluSx SINE Alu 1 300 -12 256 140 0 70 chr2 9214072 9214129 -241473725 - L1MC5 LINE L1 -610 7351 7299 * 39028 73 17 10 chr2 9214121 9216390 -241471464 - L1PA6 LINE L1 -2 6152 3901 288 0 0 0 chr2 9216390 9216422 -241471432 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2265 82 0 0 chr2 9216424 9216705 -241471149 - AluY SINE Alu -30 281 1 39028 73 17 10 chr2 9216705 9220532 -241467322 - L1PA6 LINE L1 -2253 3901 12 255 250 0 83 chr2 9221527 9221635 -241466219 + L1P LINE L1 4951 5049 -1097 296 291 112 24 chr2 9221703 9221788 -241466066 + L1ME1 LINE L1 5255 5331 -2477 2646 56 0 0 chr2 9221788 9222094 -241465760 + AluY SINE Alu 1 306 -5 296 291 112 24 chr2 9222094 9222214 -241465640 + L1ME1 LINE L1 5331 5478 -2330 769 288 98 31 chr2 9222268 9222879 -241464975 - L2 LINE L2 0 3313 2656 1869 155 26 3 chr2 9222973 9223277 -241464577 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 9223286 9223307 -241464547 + AT_rich Low_complexity Low_complexity 1 21 0 2429 55 17 0 chr2 9223312 9223603 -241464251 - AluY SINE Alu -15 296 1 791 164 0 22 chr2 9223848 9223982 -241463872 - FLAM_C SINE Alu -2 131 1 1399 181 8 17 chr2 9223982 9224274 -241463580 + L1ME1 LINE L1 5575 5856 -312 690 178 55 7 chr2 9225039 9225185 -241462669 + MER5A DNA MER1_type 1 153 -36 2072 126 0 10 chr2 9225803 9226097 -241461757 + AluSx SINE Alu 5 295 -17 186 71 0 0 chr2 9228047 9228075 -241459779 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 362 293 149 14 chr2 9228669 9228884 -241458970 - MIR SINE MIR -4 258 15 205 356 30 10 chr2 9229447 9229548 -241458306 + L2 LINE L2 2900 3002 -270 2298 81 0 33 chr2 9230357 9230664 -241457190 + AluSx SINE Alu 1 297 -15 1239 259 72 98 chr2 9231835 9232502 -241455352 + L1MEc LINE L1 142 791 -5605 1980 134 24 3 chr2 9233331 9233621 -241454233 + AluSx SINE Alu 1 296 -16 1430 185 4 8 chr2 9233630 9233879 -241453975 + AluJb SINE Alu 35 282 -30 1985 123 3 3 chr2 9233886 9234193 -241453661 + AluSx SINE Alu 1 307 0 1863 158 7 20 chr2 9235521 9235824 -241452030 - AluJb SINE Alu -13 299 1 2212 87 10 27 chr2 9236430 9236729 -241451125 - AluSq SINE Alu -19 294 1 664 191 107 6 chr2 9237884 9238052 -241449802 + MER5A DNA MER1_type 1 185 -4 395 204 31 122 chr2 9238064 9238260 -241449594 - MER5B DNA MER1_type 0 178 1 560 236 185 34 chr2 9238951 9239129 -241448725 - MER58A DNA MER1_type -15 209 5 1613 139 93 14 chr2 9241090 9241370 -241446484 + AluJo SINE Alu 1 302 -10 1287 89 48 0 chr2 9241431 9241599 -241446255 - AluSg/x SINE Alu -9 303 128 2332 92 0 0 chr2 9241601 9241895 -241445959 - AluSq SINE Alu -19 294 1 2363 99 36 30 chr2 9242411 9242773 -241445081 + THE1B LTR MaLR 1 364 0 2163 112 0 7 chr2 9242981 9243275 -241444579 + AluSx SINE Alu 1 292 -20 425 189 57 9 chr2 9244574 9244680 -241443174 - MIR SINE MIR -74 188 78 2090 128 0 28 chr2 9244686 9245006 -241442848 - AluSq SINE Alu -2 311 1 236 287 11 32 chr2 9246407 9246501 -241441353 - MIR3 SINE MIR -115 93 2 2569 53 0 3 chr2 9250458 9250758 -241437096 + AluY SINE Alu 1 299 -12 194 211 0 26 chr2 9251311 9251349 -241436505 + L2 LINE L2 3211 3247 -25 260 95 0 0 chr2 9252665 9252707 -241435147 + L1MA5 LINE L1 6255 6296 -4 2125 112 0 13 chr2 9254179 9254484 -241433370 - AluSx SINE Alu -11 301 1 274 304 81 31 chr2 9254804 9255014 -241432840 - MIR SINE MIR 0 262 44 395 340 33 0 chr2 9255473 9255626 -241432228 - MIR3 SINE MIR -7 201 44 995 169 22 38 chr2 9257234 9257417 -241430437 + MER58A DNA MER1_type 44 223 -1 185 216 81 0 chr2 9257757 9257794 -241430060 - MIR3 SINE MIR -30 178 139 675 255 192 5 chr2 9259877 9260085 -241427769 + MIR SINE MIR 16 262 0 2289 96 0 0 chr2 9260131 9260443 -241427411 - AluSq SINE Alu -1 312 1 226 252 81 27 chr2 9260856 9260967 -241426887 + L1MC5 LINE L1 7791 7907 -54 1675 146 7 29 chr2 9262129 9262437 -241425417 + AluJb SINE Alu 11 311 -1 2239 78 0 7 chr2 9262891 9263186 -241424668 + AluSc SINE Alu 1 293 -16 1532 188 40 13 chr2 9263309 9263612 -241424242 + AluJo SINE Alu 1 311 -1 1068 148 13 91 chr2 9264062 9264292 -241423562 - AluJb SINE Alu -18 294 83 303 271 19 0 chr2 9264374 9264481 -241423373 + L1MC4 LINE L1 7934 8042 0 306 220 114 53 chr2 9267872 9268004 -241419850 - L1MD3 LINE L1 0 7995 7856 24 32 0 0 chr2 9268628 9268659 -241419195 + GC_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 9268703 9268727 -241419127 + GC_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 9269065 9269095 -241418759 + GC_rich Low_complexity Low_complexity 1 30 0 235 301 5 54 chr2 9269229 9269415 -241418439 + C-rich Low_complexity Low_complexity 4 180 0 25 0 0 0 chr2 9269692 9269717 -241418137 + GC_rich Low_complexity Low_complexity 1 25 0 208 265 163 10 chr2 9269822 9269920 -241417934 - L2 LINE L2 -43 3270 3158 1832 247 166 31 chr2 9269964 9270823 -241417031 - L2 LINE L2 -338 2976 2002 2243 106 0 0 chr2 9271040 9271351 -241416503 - AluSx SINE Alu -1 311 1 280 244 56 0 chr2 9271379 9271469 -241416385 - MER113 DNA MER1_type? -420 101 7 459 293 110 62 chr2 9271662 9271952 -241415902 + L2 LINE L2 2966 3269 -3 1660 159 37 10 chr2 9272290 9272460 -241415394 - AluJb SINE Alu -8 304 121 192 77 0 0 chr2 9272460 9272486 -241415368 + (TG)n Simple_repeat Simple_repeat 2 27 0 1660 159 37 10 chr2 9272486 9272611 -241415243 - AluJb SINE Alu -191 121 1 2147 103 7 0 chr2 9272694 9272994 -241414860 + AluSx SINE Alu 2 303 -9 615 272 94 89 chr2 9273072 9273501 -241414353 - L1MC4a LINE L1 -1760 6048 5613 2035 122 0 0 chr2 9273501 9273797 -241414057 - AluSq SINE Alu -9 304 9 615 272 94 89 chr2 9273797 9274039 -241413815 - L1MC4a LINE L1 -2195 5613 5374 346 301 0 0 chr2 9274225 9274308 -241413546 + MIR SINE MIR 31 113 -95 188 270 167 16 chr2 9274354 9274480 -241413374 + L2 LINE L2 2955 3099 -173 325 236 176 23 chr2 9275017 9275188 -241412666 + MIR SINE MIR 34 231 -31 231 367 37 18 chr2 9275228 9275337 -241412517 + L2 LINE L2 3141 3251 -21 405 322 87 7 chr2 9275404 9275553 -241412301 - MIR SINE MIR -57 205 45 203 358 46 18 chr2 9326150 9326259 -241361595 - MER5A DNA MER1_type -30 159 48 298 297 0 0 chr2 9326304 9326378 -241361476 - MER5B DNA MER1_type 0 178 105 180 0 0 0 chr2 9326894 9326914 -241360940 + (T)n Simple_repeat Simple_repeat 1 20 0 2222 84 30 0 chr2 9327087 9327383 -241360471 + AluSq SINE Alu 1 305 -8 355 280 37 112 chr2 9327818 9328032 -241359822 + L1MEd LINE L1 867 1064 -5055 487 195 46 0 chr2 9328412 9328499 -241359355 + 7SLRNA srpRNA srpRNA 1 91 -229 1488 173 14 25 chr2 9329688 9329972 -241357882 + AluJo SINE Alu 11 291 -21 309 316 65 7 chr2 9330099 9330254 -241357600 + MLT1K LTR MaLR 357 520 -68 241 319 64 0 chr2 9330307 9330401 -241357453 - MIR SINE MIR -68 194 95 1904 131 7 13 chr2 9331188 9331358 -241356496 - AluSx SINE Alu -9 303 134 2222 97 3 0 chr2 9331358 9331657 -241356197 - AluSp SINE Alu -13 300 1 1904 131 7 13 chr2 9331657 9331791 -241356063 - AluSx SINE Alu -178 134 1 242 311 59 17 chr2 9331834 9331953 -241355901 + MIR SINE MIR 73 196 -66 549 241 45 75 chr2 9331973 9332016 -241355838 - L1MB8 LINE L1 -27 6151 6108 2136 106 7 0 chr2 9332016 9332308 -241355546 + AluSx SINE Alu 1 294 -18 549 241 45 75 chr2 9332308 9332463 -241355391 - L1MB8 LINE L1 -70 6108 5959 814 216 154 10 chr2 9333062 9333157 -241354697 + MER58 DNA MER1_type 1 81 -260 2268 87 3 6 chr2 9333157 9333468 -241354386 + AluY SINE Alu 1 310 -1 814 216 154 10 chr2 9333468 9333580 -241354274 + MER58 DNA MER1_type 81 238 -103 199 346 59 10 chr2 9334379 9334480 -241353374 + MIR3 SINE MIR 13 118 -90 207 0 0 0 chr2 9334968 9334991 -241352863 + (CTGGGG)n Simple_repeat Simple_repeat 2 24 0 374 289 209 13 chr2 9335001 9335606 -241352248 - L2 LINE L2 -9 3304 2564 2119 98 0 0 chr2 9336053 9336363 -241351491 - AluY SINE Alu 0 311 1 493 291 126 54 chr2 9336372 9336722 -241351132 + L2 LINE L2 2896 3270 -2 2247 79 10 0 chr2 9336865 9337156 -241350698 - AluSc SINE Alu -15 294 1 224 175 16 32 chr2 9338244 9338307 -241349547 + GA-rich Low_complexity Low_complexity 1 62 0 260 313 0 49 chr2 9338588 9338732 -241349122 + MER112 DNA MER1_type 118 254 -6 440 286 16 8 chr2 9339335 9339461 -241348393 - MIR SINE MIR -121 141 15 349 274 20 20 chr2 9339529 9339631 -241348223 + MER5B DNA MER1_type 77 178 0 2134 105 13 0 chr2 9340137 9340441 -241347413 - AluSc SINE Alu -1 308 1 1495 144 83 11 chr2 9340465 9340754 -241347100 - AluJo SINE Alu 0 308 1 474 222 0 0 chr2 9340765 9340846 -241347008 - AluJ/FLAM SINE Alu -228 84 4 903 281 106 59 chr2 9341017 9341053 -241346801 - HAL1b LINE L1 -461 887 854 2236 113 3 0 chr2 9341053 9341364 -241346490 + AluSx SINE Alu 1 312 0 903 281 106 59 chr2 9341364 9342111 -241345743 - HAL1b LINE L1 -494 854 67 2132 117 0 0 chr2 9342320 9342619 -241345235 - AluSx SINE Alu -13 299 1 888 129 0 0 chr2 9343222 9343354 -241344500 + AluSq/x SINE Alu 1 132 -181 2206 97 3 0 chr2 9343356 9343655 -241344199 + AluY SINE Alu 1 300 -11 2453 232 68 55 chr2 9343716 9344007 -241343847 - L1ME1 LINE L1 -5 6161 5875 2222 88 7 3 chr2 9344007 9344303 -241343551 - AluSq SINE Alu -16 297 1 2453 232 68 55 chr2 9344303 9344486 -241343368 - L1ME1 LINE L1 -291 5875 5696 2091 106 3 13 chr2 9344486 9344788 -241343066 - AluSg SINE Alu -11 299 1 2453 232 68 55 chr2 9344788 9345128 -241342726 - L1ME1 LINE L1 -470 5696 5322 2322 90 0 0 chr2 9345128 9345438 -241342416 - AluY SINE Alu -1 310 1 2453 232 68 55 chr2 9345438 9345663 -241342191 - L1ME1 LINE L1 -844 5322 5101 1889 154 20 0 chr2 9345667 9345973 -241341881 - AluSx SINE Alu 0 312 1 1182 148 118 4 chr2 9346003 9346240 -241341614 + L1M2 LINE L1 5509 5772 -540 2044 129 0 7 chr2 9346240 9346534 -241341320 + AluSx SINE Alu 1 292 -20 323 208 57 9 chr2 9346559 9346665 -241341189 - L1ME1 LINE L1 -1095 5051 4941 1045 196 30 4 chr2 9347021 9347256 -241340598 + L1MB4 LINE L1 5940 6180 0 2014 101 0 80 chr2 9347382 9347708 -241340146 + AluSx SINE Alu 1 300 -12 2373 66 3 3 chr2 9347879 9348184 -241339670 - AluSp SINE Alu -6 307 3 1396 74 133 0 chr2 9349327 9349530 -241338324 + MER30 DNA MER1_type 1 230 0 186 43 0 0 chr2 9349829 9349852 -241338002 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1566 149 18 21 chr2 9349853 9350134 -241337720 - AluJb SINE Alu -32 280 1 2410 73 0 6 chr2 9350203 9350520 -241337334 - AluYb8 SINE Alu -3 315 1 1113 263 77 27 chr2 9350527 9350968 -241336886 - L1ME3A LINE L1 -6 6164 5702 189 178 0 0 chr2 9351139 9351184 -241336670 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 341 338 47 27 chr2 9351228 9351376 -241336478 - MIR SINE MIR -15 247 97 262 267 130 8 chr2 9351366 9351497 -241336357 + MIR SINE MIR 96 242 -20 * 190 261 43 0 chr2 9351532 9351578 -241336276 - MIR SINE MIR -174 88 41 306 232 14 0 chr2 9352812 9352881 -241334973 + MER103 DNA DNA 17 86 -80 1851 146 34 3 chr2 9354253 9354548 -241333306 - AluJb SINE Alu -8 304 1 381 206 0 0 chr2 9354786 9354888 -241332966 + (CA)n Simple_repeat Simple_repeat 1 102 0 270 311 61 2 chr2 9354965 9355084 -241332770 - MIR SINE MIR -56 152 28 286 276 92 10 chr2 9355558 9355656 -241332198 + MIR SINE MIR 11 116 -146 367 266 37 0 chr2 9355890 9355999 -241331855 + MIR3 SINE MIR 44 156 -52 344 136 15 30 chr2 9356684 9356750 -241331104 + MIR SINE MIR 81 145 -63 279 314 99 8 chr2 9356996 9357117 -241330737 + MIR SINE MIR 28 159 -103 417 190 0 0 chr2 9357192 9357292 -241330562 + (TG)n Simple_repeat Simple_repeat 1 100 0 436 262 160 27 chr2 9357402 9357627 -241330227 + MIR SINE MIR 8 262 0 1541 154 4 0 chr2 9358200 9358440 -241329414 - AluJb SINE Alu -71 241 1 218 329 150 7 chr2 9358857 9358997 -241328857 + L3 LINE CR1 1138 1297 -280 288 289 168 13 chr2 9359739 9359888 -241327966 - MIR SINE MIR -70 192 21 264 333 23 0 chr2 9360354 9360441 -241327413 + L2 LINE L2 3182 3270 -2 1091 160 14 89 chr2 9361241 9361522 -241326332 + MER31A LTR ERV1 216 475 -10 1867 139 13 30 chr2 9362164 9362467 -241325387 - AluJb SINE Alu -14 298 1 330 328 39 8 chr2 9364978 9365106 -241322748 - L2 LINE L2 -2 3311 3180 213 260 32 99 chr2 9365286 9365464 -241322390 + MIR SINE MIR 7 162 -46 640 217 14 0 chr2 9365942 9366085 -241321769 - MER45A DNA AcHobo -31 147 3 639 238 67 6 chr2 9366227 9366391 -241321463 + MIR SINE MIR 23 196 -66 925 240 93 13 chr2 9367155 9367468 -241320386 + MLT1A2 LTR MaLR 3 340 -34 1778 147 40 17 chr2 9367780 9368080 -241319774 + AluJo SINE Alu 1 307 -5 262 239 11 11 chr2 9368254 9368267 -241319587 - L1MA10 LINE L1 -1 6333 6321 1603 227 37 64 chr2 9368267 9368554 -241319300 - L1ME3 LINE L1 -4 6158 5865 3188 147 18 72 chr2 9368554 9368789 -241319065 - L1MB3 LINE L1 -7 6176 5930 1953 124 3 29 chr2 9368789 9369095 -241318759 - AluSx SINE Alu -14 298 1 3188 147 18 72 chr2 9369095 9369460 -241318394 - L1MB3 LINE L1 -253 5930 5613 2343 66 3 0 chr2 9369460 9369748 -241318106 - AluSp SINE Alu -15 298 10 3188 147 18 72 chr2 9369748 9369813 -241318041 - L1MB3 LINE L1 -570 5613 5546 1603 227 37 64 chr2 9369813 9370115 -241317739 - L1ME3 LINE L1 -297 5865 5585 2089 121 0 0 chr2 9370153 9370482 -241317372 + AluSx SINE Alu 1 329 0 927 266 84 12 chr2 9370546 9370881 -241316973 - L1MD2 LINE L1 -2 6357 5999 270 136 0 0 chr2 9370883 9370927 -241316927 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 1176 143 0 0 chr2 9370939 9371107 -241316747 - AluSx SINE Alu -140 172 5 2366 54 0 17 chr2 9371111 9371409 -241316445 - AluY SINE Alu -12 299 7 2179 127 0 0 chr2 9371413 9371712 -241316142 - AluSx SINE Alu -13 299 1 1268 236 58 42 chr2 9371742 9371899 -241315955 - L1MD2 LINE L1 -365 5994 5841 2129 184 17 0 chr2 9371899 9372258 -241315596 + MLT1A1 LTR MaLR 1 365 0 1268 236 58 42 chr2 9372258 9372340 -241315514 - L1MD2 LINE L1 -518 5841 5762 2149 107 7 0 chr2 9372340 9372640 -241315214 - AluSx SINE Alu -10 302 1 1268 236 58 42 chr2 9372640 9372781 -241315073 - L1MD2 LINE L1 -597 5762 5607 284 218 0 0 chr2 9372791 9372846 -241315008 - Tigger5 DNA MER2_type 0 2323 2269 545 176 0 4 chr2 9372850 9372990 -241314864 - Tigger5 DNA MER2_type -2129 194 3 210 37 0 0 chr2 9373943 9373970 -241313884 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2041 121 3 0 chr2 9373974 9374256 -241313598 - AluSx SINE Alu -29 283 1 561 245 41 0 chr2 9374330 9374477 -241313377 - MIR SINE MIR -43 219 67 570 220 86 116 chr2 9374519 9374735 -241313119 - L1M4 LINE L1 -2884 3262 3025 242 114 0 0 chr2 9374735 9374770 -241313084 - Alu SINE Alu -207 95 61 570 220 86 116 chr2 9374770 9374891 -241312963 - L1M4 LINE L1 -3121 3025 2902 1925 153 0 6 chr2 9374942 9375255 -241312599 - AluJo SINE Alu -1 311 1 1460 130 0 49 chr2 9375320 9375593 -241312261 + AluSg/x SINE Alu 74 310 0 338 163 12 75 chr2 9375612 9375692 -241312162 + MLT1D LTR MaLR 393 505 0 696 161 0 9 chr2 9375730 9375842 -241312012 + FLAM_A SINE Alu 25 135 -7 1830 157 27 3 chr2 9376085 9376384 -241311470 + AluJo SINE Alu 1 306 -6 614 133 0 14 chr2 9376757 9376997 -241310857 + AluSx SINE Alu 1 292 -18 2398 70 0 13 chr2 9376997 9377310 -241310544 + AluY SINE Alu 1 309 -2 306 200 8 144 chr2 9377583 9377708 -241310146 - MER81 DNA DNA 0 114 7 240 291 58 0 chr2 9377963 9378049 -241309805 - MIR3 SINE MIR -27 181 91 200 292 14 56 chr2 9378078 9378150 -241309704 + MIR3 SINE MIR 4 72 -136 255 150 0 0 chr2 9378425 9378485 -241309369 + (GA)n Simple_repeat Simple_repeat 2 61 0 205 262 12 48 chr2 9378892 9378976 -241308878 + C-rich Low_complexity Low_complexity 1 81 0 335 282 0 13 chr2 9379335 9379413 -241308441 + MIR3 SINE MIR 81 157 -51 1533 72 0 43 chr2 9379436 9379644 -241308210 - AluSc SINE Alu -110 199 1 328 313 87 33 chr2 9379795 9379945 -241307909 + MIR SINE MIR 105 262 0 200 275 110 11 chr2 9380813 9380904 -241306950 + MIR SINE MIR 85 184 -78 889 196 16 37 chr2 9381070 9381259 -241306595 + MER5A DNA MER1_type 5 189 0 1254 226 36 33 chr2 9381434 9381796 -241306058 - MLT1B LTR MaLR -11 379 17 212 378 124 28 chr2 9382139 9382356 -241305498 - MIR SINE MIR -5 257 20 287 336 80 0 chr2 9382831 9382956 -241304898 + MIR SINE MIR 79 213 -49 327 330 52 0 chr2 9382985 9383082 -241304772 + L2 LINE L2 3159 3260 -12 844 142 17 17 chr2 9383120 9383296 -241304558 + (ATGGTG)n Simple_repeat Simple_repeat 1 176 0 954 157 0 0 chr2 9383305 9383483 -241304371 + (TGG)n Simple_repeat Simple_repeat 3 180 0 704 148 11 28 chr2 9383501 9383677 -241304177 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 725 184 0 17 chr2 9383711 9383885 -241303969 + (ATGGTG)n Simple_repeat Simple_repeat 3 173 0 487 209 0 37 chr2 9383922 9384085 -241303769 + (ATGGTG)n Simple_repeat Simple_repeat 4 160 0 251 245 10 71 chr2 9384435 9384533 -241303321 + MIR SINE MIR 29 120 -142 267 314 81 0 chr2 9386348 9386472 -241301382 + LTR33 LTR ERVL 45 178 -343 288 336 33 0 chr2 9386588 9386710 -241301144 + LTR33 LTR ERVL 344 469 -52 191 261 76 43 chr2 9388057 9388149 -241299705 + MIR SINE MIR 43 137 -71 185 336 9 56 chr2 9388694 9388801 -241299053 - L2 LINE L2 -252 3020 2919 204 287 117 21 chr2 9390338 9390432 -241297422 + MIR SINE MIR 102 204 -58 1322 165 4 17 chr2 9391595 9391832 -241296022 - AluJb SINE Alu -15 297 64 1414 168 10 1 chr2 9391832 9392230 -241295624 - LTR19A LTR ERV1 -6 480 1 857 134 6 0 chr2 9392230 9392406 -241295448 - HERVFH19I LTR ERV1 0 7719 4796 * 7905 178 50 42 chr2 9392405 9392689 -241295165 - HERVFH19I LTR ERV1 -283 5417 5137 2477 71 3 0 chr2 9392689 9392999 -241294855 + AluY SINE Alu 1 311 0 7905 178 50 42 chr2 9392999 9393032 -241294822 - HERVFH19I LTR ERV1 -563 5137 5106 2044 131 3 0 chr2 9393032 9393322 -241294532 - AluSq SINE Alu -22 291 1 7905 178 50 42 chr2 9393322 9394054 -241293800 - HERVFH19I LTR ERV1 -594 5106 4382 2202 118 0 6 chr2 9394054 9394368 -241293486 + AluSx SINE Alu 1 312 0 7905 178 50 42 chr2 9394368 9395511 -241292343 - HERVFH19I LTR ERV1 -1318 4382 2865 2739 116 98 0 chr2 9395570 9396011 -241291843 - LTR19A LTR ERV1 0 486 3 486 149 0 0 chr2 9396013 9396087 -241291767 - AluJ/FLAM SINE Alu -238 74 1 670 240 36 26 chr2 9396463 9396655 -241291199 + MIR SINE MIR 14 207 -55 2080 108 0 7 chr2 9396658 9396946 -241290908 + AluSg SINE Alu 1 286 -24 237 33 0 0 chr2 9396946 9396976 -241290878 + (CATA)n Simple_repeat Simple_repeat 2 31 0 233 216 21 52 chr2 9397214 9397311 -241290543 + LTR67 LTR ERVL 442 535 -22 406 324 29 0 chr2 9397442 9397581 -241290273 - L2 LINE L2 -181 3091 2949 2106 125 0 3 chr2 9398869 9399182 -241288672 - AluSx SINE Alu 0 312 1 2093 77 0 0 chr2 9399191 9399452 -241288402 + AluY SINE Alu 38 298 -13 508 256 54 22 chr2 9399452 9399675 -241288179 + L1ME2 LINE L1 5598 5827 -337 310 300 147 10 chr2 9399682 9400164 -241287690 + L1MEc LINE L1 1150 1720 -856 664 357 108 18 chr2 9400233 9401145 -241286709 + L2 LINE L2 2313 3313 0 183 289 0 0 chr2 9401891 9401936 -241285918 + L2 LINE L2 2260 2304 -1010 2026 156 0 6 chr2 9402233 9402547 -241285307 - AluSx SINE Alu 0 312 1 399 127 0 0 chr2 9402765 9402828 -241285026 + (TG)n Simple_repeat Simple_repeat 2 64 0 183 389 49 14 chr2 9403289 9403433 -241284421 + L2 LINE L2 3082 3230 -42 1549 180 171 3 chr2 9403915 9404231 -241283623 + MLT1A2 LTR MaLR 3 371 -3 1427 260 101 10 chr2 9404233 9404638 -241283216 + L1ME3A LINE L1 4929 5296 -866 1992 147 0 0 chr2 9404638 9404937 -241282917 + AluSx SINE Alu 1 299 -13 1427 260 101 10 chr2 9404937 9405104 -241282750 + L1ME3A LINE L1 5296 5446 -716 2892 143 20 29 chr2 9405104 9405593 -241282261 + MER66B LTR ERV1 2 486 0 1427 260 101 10 chr2 9405593 9405864 -241281990 + L1ME3A LINE L1 5446 5853 -309 1834 166 13 0 chr2 9405923 9406231 -241281623 + AluJb SINE Alu 1 312 0 515 182 42 7 chr2 9406233 9406376 -241281478 + GA-rich Low_complexity Low_complexity 3 150 0 202 74 0 0 chr2 9406386 9406413 -241281441 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 2118 128 0 3 chr2 9406427 9406733 -241281121 + AluJb SINE Alu 1 305 -7 334 241 147 9 chr2 9406737 9406853 -241281001 + L1ME3A LINE L1 5976 6107 -63 495 83 48 36 chr2 9406859 9406928 -241280926 + LTR5 LTR ERVK 1 73 -896 2124 77 4 4 chr2 9406928 9407202 -241280652 - AluSp SINE Alu -39 274 1 495 83 48 36 chr2 9407202 9407216 -241280638 + LTR5 LTR ERVK 73 85 -884 383 21 0 0 chr2 9407216 9407264 -241280590 + AluSp/q SINE Alu 218 265 -38 595 88 0 0 chr2 9407264 9407344 -241280510 - LTR5 LTR ERVK -889 80 1 523 215 67 0 chr2 9407346 9407495 -241280359 - MER97a DNA MER1_type? -221 673 515 262 268 0 24 chr2 9407661 9407743 -241280111 - MER115 DNA AcHobo -613 80 1 1683 142 49 17 chr2 9408084 9408372 -241279482 - AluJo SINE Alu -9 303 7 205 324 59 0 chr2 9408793 9408861 -241278993 + MIR SINE MIR 81 152 -110 711 248 12 6 chr2 9409024 9409185 -241278669 + MER103 DNA DNA 3 164 -2 224 59 29 0 chr2 9409189 9409223 -241278631 + (TG)n Simple_repeat Simple_repeat 1 35 0 742 74 44 15 chr2 9409240 9409375 -241278479 + GA-rich Low_complexity Low_complexity 2 140 0 494 321 77 6 chr2 9411815 9411983 -241275871 - MIR SINE MIR -48 214 35 824 243 74 42 chr2 9412074 9412411 -241275443 + MLT1A1 LTR MaLR 1 348 -17 443 258 121 0 chr2 9412436 9412560 -241275294 - MIR SINE MIR -102 160 22 2502 51 0 13 chr2 9412729 9413041 -241274813 - AluY SINE Alu -3 308 1 3251 178 22 46 chr2 9413535 9414292 -241273562 + L1MB3 LINE L1 5417 6155 -28 3993 87 20 14 chr2 9415907 9416458 -241271396 + MER41A LTR ERV1 1 554 0 1362 211 111 75 chr2 9417854 9418234 -241269620 + MLT1C LTR MaLR 1 401 -66 1890 98 62 0 chr2 9418234 9418510 -241269344 - AluSx SINE Alu -19 293 1 1362 211 111 75 chr2 9418510 9418580 -241269274 + MLT1C LTR MaLR 401 467 0 520 242 43 12 chr2 9419885 9420046 -241267808 - MLT1F LTR MaLR -7 535 370 1488 154 68 39 chr2 9420209 9420489 -241267365 + AluJo SINE Alu 2 289 -23 2334 70 13 3 chr2 9420949 9421250 -241266604 - AluY SINE Alu -7 304 1 580 293 55 6 chr2 9421718 9421882 -241265972 + MER5B DNA MER1_type 2 173 -5 1790 161 3 3 chr2 9423260 9423552 -241264302 - AluJb SINE Alu -20 292 1 435 276 69 35 chr2 9423710 9423913 -241263941 + MLT1J2 LTR MaLR 240 449 -1 251 253 63 63 chr2 9423917 9424012 -241263842 + MIR SINE MIR 162 256 -6 293 251 30 133 chr2 9424214 9424274 -241263580 - MLT1K LTR MaLR 0 588 523 2136 112 0 28 chr2 9424274 9424596 -241263258 + AluSq SINE Alu 1 313 0 293 251 30 133 chr2 9424596 9424738 -241263116 - MLT1K LTR MaLR -65 523 407 319 322 202 8 chr2 9425244 9425502 -241262352 + L3 LINE CR1 1163 1470 -107 2113 89 0 92 chr2 9425999 9426337 -241261517 + AluSc SINE Alu 3 309 0 378 280 0 0 chr2 9426381 9426513 -241261341 + (TG)n Simple_repeat Simple_repeat 1 132 0 228 257 0 0 chr2 9426516 9426629 -241261225 + (TGAG)n Simple_repeat Simple_repeat 4 116 0 389 222 20 6 chr2 9426662 9427010 -241260844 + (TG)n Simple_repeat Simple_repeat 1 353 0 285 262 30 30 chr2 9427010 9427174 -241260680 + (TGAG)n Simple_repeat Simple_repeat 3 166 0 215 326 116 0 chr2 9428382 9428511 -241259343 + MIR SINE MIR 104 247 -15 391 304 9 7 chr2 9428532 9428659 -241259195 + MIR SINE MIR 16 138 -70 180 295 95 11 chr2 9428993 9429088 -241258766 - MIR SINE MIR -63 145 43 299 313 50 0 chr2 9431641 9431740 -241256114 - MIR3 SINE MIR -42 166 63 1825 162 14 0 chr2 9431927 9432217 -241255637 - AluJb SINE Alu -18 294 1 304 293 41 41 chr2 9435160 9435283 -241252571 + MIR3 SINE MIR 64 186 -22 256 344 0 22 chr2 9435972 9436062 -241251792 + MIR SINE MIR 174 261 -1 189 242 97 0 chr2 9436793 9436855 -241250999 - MIR SINE MIR -87 121 54 394 335 147 12 chr2 9436939 9437382 -241250472 + L2 LINE L2 2551 3053 -260 1870 261 60 7 chr2 9437492 9438027 -241249827 - L1MD1 LINE L1 -86 6262 5709 1280 344 203 19 chr2 9438028 9439538 -241248316 - L2 LINE L2 -605 2709 922 1407 164 23 34 chr2 9439550 9439813 -241248041 + AluJb SINE Alu 15 274 -38 306 263 20 10 chr2 9439838 9439937 -241247917 + L1MEd LINE L1 46 145 -5974 830 296 47 58 chr2 9440157 9440818 -241247036 + L1MEd LINE L1 602 1255 -4864 29 60 0 0 chr2 9440882 9440932 -241246922 + AT_rich Low_complexity Low_complexity 1 50 0 564 42 0 0 chr2 9440940 9441011 -241246843 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 502 256 31 6 chr2 9441162 9441322 -241246532 + L1ME LINE L1 5389 5552 -610 6656 216 31 29 chr2 9441339 9441472 -241246382 - L1MD1 LINE L1 -769 5377 5246 2108 111 3 7 chr2 9441472 9441770 -241246084 + AluSg SINE Alu 14 310 0 6656 216 31 29 chr2 9441770 9443592 -241244262 - L1MD1 LINE L1 -900 5246 3419 352 336 0 0 chr2 9443611 9443742 -241244112 - L2 LINE L2 -2382 932 802 247 390 138 8 chr2 9443751 9444005 -241243849 + L2 LINE L2 2978 3264 -8 551 225 61 56 chr2 9444022 9444235 -241243619 - HAL1 LINE L1 -695 1812 1599 416 326 14 35 chr2 9444241 9444385 -241243469 - HAL1 LINE L1 -977 1530 1390 238 146 0 83 chr2 9444397 9444445 -241243409 - MER5A DNA MER1_type 0 189 146 230 98 0 49 chr2 9444448 9444489 -241243365 - MER5A DNA MER1_type -150 39 1 367 293 65 78 chr2 9444514 9444808 -241243046 - L1MC5 LINE L1 -199 7762 7473 1581 193 16 16 chr2 9444808 9445148 -241242706 - AluJo SINE Alu 0 342 3 797 254 119 28 chr2 9445159 9445596 -241242258 - HAL1 LINE L1 -1253 1254 778 191 146 24 0 chr2 9445596 9445637 -241242217 + (TG)n Simple_repeat Simple_repeat 1 42 0 231 250 36 88 chr2 9445640 9445832 -241242022 - HAL1 LINE L1 -1723 784 603 347 269 82 106 chr2 9445880 9446136 -241241718 - HAL1 LINE L1 -1987 520 271 2309 93 3 3 chr2 9446220 9446533 -241241321 - AluSq SINE Alu 0 313 1 332 225 0 0 chr2 9447766 9447837 -241240017 - MER53 DNA DNA -2 187 117 306 209 77 0 chr2 9447777 9447868 -241239986 + MER53 DNA DNA 24 121 -68 * 342 279 42 21 chr2 9448503 9448657 -241239197 - MIR SINE MIR -63 145 3 261 57 0 0 chr2 9450586 9450621 -241237233 + (CA)n Simple_repeat Simple_repeat 1 35 0 199 195 0 0 chr2 9451976 9452017 -241235837 - L2 LINE L2 0 3313 3273 242 305 34 68 chr2 9452035 9452153 -241235701 + MER81 DNA DNA 1 114 0 2309 105 0 0 chr2 9452256 9452562 -241235292 - AluSx SINE Alu -6 306 1 338 322 57 48 chr2 9453017 9453244 -241234610 - MIR SINE MIR -3 259 31 1451 113 0 0 chr2 9453919 9454123 -241233731 + AluSg/x SINE Alu 107 310 0 2439 149 29 0 chr2 9454415 9454824 -241233030 - MSTC LTR MaLR 0 428 8 2045 142 7 0 chr2 9454918 9455221 -241232633 - AluSx SINE Alu -7 305 1 853 295 101 47 chr2 9455555 9455982 -241231872 - MLT1J2 LTR MaLR 0 450 1 241 319 43 0 chr2 9456222 9456316 -241231538 - L2 LINE L2 -528 2786 2689 3957 45 0 14 chr2 9456782 9457269 -241230585 + L1PA5 LINE L1 5675 6154 0 1400 245 69 39 chr2 9458049 9458539 -241229315 - MLT1D LTR MaLR 0 505 1 187 284 45 0 chr2 9459131 9459198 -241228656 + MIR SINE MIR 78 147 -61 691 185 8 31 chr2 9459652 9459782 -241228072 + AluJo/FLAM SINE Alu 2 128 -174 1531 135 64 70 chr2 9459784 9460096 -241227758 + AluJb SINE Alu 3 312 0 1958 194 62 36 chr2 9461782 9462169 -241225685 + Charlie1b DNA MER1_type 1 405 -2356 2069 138 0 3 chr2 9462169 9462481 -241225373 - AluSq SINE Alu -1 312 2 1958 194 62 36 chr2 9462481 9462597 -241225257 + Charlie1b DNA MER1_type 405 517 -6 392 305 24 42 chr2 9462674 9462841 -241225013 + MIR SINE MIR 29 192 -70 361 258 32 0 chr2 9463415 9463508 -241224346 + MIR3 SINE MIR 61 156 -52 1807 160 7 3 chr2 9464375 9464669 -241223185 + AluJb SINE Alu 1 295 -17 218 267 11 0 chr2 9464755 9464845 -241223009 + (CA)n Simple_repeat Simple_repeat 2 92 0 528 254 0 0 chr2 9464865 9465042 -241222812 + (CA)n Simple_repeat Simple_repeat 1 177 0 1652 202 67 0 chr2 9465610 9465973 -241221881 + MLT1B LTR MaLR 1 466 -1 184 208 42 21 chr2 9466100 9466148 -241221706 + L2 LINE L2 3223 3271 -1 2190 104 0 0 chr2 9466149 9466446 -241221408 - AluSx SINE Alu -13 299 3 1346 268 107 16 chr2 9466880 9467377 -241220477 + MLT1F LTR MaLR 1 542 0 1645 159 10 7 chr2 9467447 9467736 -241220118 - AluJb SINE Alu -16 296 7 2029 67 50 18 chr2 9467944 9468227 -241219627 + AluY SINE Alu 1 292 -19 3849 108 45 69 chr2 9468445 9468979 -241218875 - MER41B LTR ERV1 0 635 118 2188 80 7 0 chr2 9468979 9469268 -241218586 + AluSc SINE Alu 19 309 0 3849 108 45 69 chr2 9469268 9469384 -241218470 - MER41B LTR ERV1 -517 118 1 209 229 83 0 chr2 9470001 9470049 -241217805 - L2 LINE L2 -1 3271 3220 254 373 49 35 chr2 9470538 9470822 -241217032 - L2 LINE L2 -736 2578 2291 233 330 33 0 chr2 9471768 9471859 -241215995 - MLT1J LTR MaLR -92 419 326 334 252 163 0 chr2 9471862 9471985 -241215869 - MLT1J2 LTR MaLR -307 143 1 207 404 60 6 chr2 9472188 9472354 -241215500 - L2 LINE L2 -1855 1459 1285 321 318 79 39 chr2 9472446 9472726 -241215128 - L2 LINE L2 -2361 953 663 589 266 87 0 chr2 9473012 9473196 -241214658 + MIR SINE MIR 14 213 -49 206 83 56 0 chr2 9473584 9473620 -241214234 + T-rich Low_complexity Low_complexity 2 39 0 2223 114 0 0 chr2 9473635 9473933 -241213921 + AluSx SINE Alu 1 298 -14 1901 127 3 24 chr2 9473933 9474224 -241213630 - AluSx SINE Alu -27 285 1 455 48 16 0 chr2 9474230 9474292 -241213562 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 861 211 6 34 chr2 9474304 9474479 -241213375 - AluJo SINE Alu -141 171 2 225 0 0 0 chr2 9474493 9474518 -241213336 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1777 113 0 4 chr2 9474518 9474765 -241213089 - AluSx SINE Alu -66 246 1 1559 160 82 17 chr2 9477027 9477320 -241210534 + AluJo SINE Alu 1 312 0 182 323 48 0 chr2 9478334 9478396 -241209458 - MIR SINE MIR -63 145 81 205 296 31 41 chr2 9478626 9478753 -241209101 - MIR3 SINE MIR -52 156 68 315 267 75 25 chr2 9480599 9480719 -241207135 - L2 LINE L2 -1 3312 3187 736 220 23 0 chr2 9480825 9480998 -241206856 + MER96B DNA MER1_type? 1 177 -240 1581 161 68 0 chr2 9481397 9481677 -241206177 - AluJb SINE Alu -13 299 1 906 169 9 87 chr2 9481687 9481918 -241205936 - L1MB8 LINE L1 -3 6175 5963 914 270 88 47 chr2 9482141 9482504 -241205350 + MLT1J LTR MaLR 33 410 -101 657 266 8 55 chr2 9482535 9482772 -241205082 - L1ME1 LINE L1 -5 6161 5936 250 290 21 11 chr2 9482777 9482870 -241204984 + MLT1J LTR MaLR 414 507 -4 340 295 90 7 chr2 9482966 9483278 -241204576 - LTR16A LTR ERVL -12 438 45 22 35 0 0 chr2 9484170 9484199 -241203655 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 9484257 9484280 -241203574 + AT_rich Low_complexity Low_complexity 1 23 0 394 242 10 39 chr2 9484446 9484549 -241203305 - L1MC4 LINE L1 -1339 6983 1995 387 284 23 0 chr2 9484500 9484588 -241203266 + L1MC4 LINE L1 6614 6703 -1339 * 310 357 0 0 chr2 9484551 9484635 -241203219 - L1MC4 LINE L1 -1342 6700 6617 * 369 318 0 0 chr2 9484601 9484689 -241203165 + L1MC4 LINE L1 6615 6702 -1340 360 322 0 0 chr2 9484637 9484724 -241203130 - L1MC4 LINE L1 -1342 6700 6614 * 266 230 23 0 chr2 9484756 9484843 -241203011 + L1MC4 LINE L1 6614 6702 -1340 306 194 0 0 chr2 9484843 9484905 -241202949 + (CA)n Simple_repeat Simple_repeat 1 62 0 1888 139 7 0 chr2 9484915 9485203 -241202651 - AluSq SINE Alu -23 290 1 669 297 107 30 chr2 9485233 9485800 -241202054 - L1ME3A LINE L1 -247 5923 5308 1509 186 4 0 chr2 9485874 9486137 -241201717 + AluJo SINE Alu 37 300 -12 3900 179 27 27 chr2 9486284 9487469 -241200385 - L1MB7 LINE L1 -54 6130 4928 716 165 0 0 chr2 9487472 9487581 -241200273 + AluSp/q SINE Alu 190 298 -15 995 176 5 10 chr2 9487592 9487785 -241200069 - L1MB7 LINE L1 -1215 4931 4740 1018 157 35 0 chr2 9487852 9488024 -241199830 + MER5A DNA MER1_type 1 178 -11 993 156 85 5 chr2 9488044 9488255 -241199599 + MER33 DNA MER1_type 2 229 -95 3033 136 2 6 chr2 9488730 9489208 -241198646 - MER41B LTR ERV1 0 635 160 1261 91 6 0 chr2 9489370 9489546 -241198308 - MER41B LTR ERV1 -458 177 1 1897 121 0 11 chr2 9490047 9490327 -241197527 - AluJb SINE Alu -17 295 19 240 35 0 0 chr2 9490331 9490360 -241197494 + (T)n Simple_repeat Simple_repeat 1 29 0 180 300 60 30 chr2 9490372 9490472 -241197382 - MIR SINE MIR -64 198 96 1247 211 67 58 chr2 9490777 9491123 -241196731 - MLT1A2 LTR MaLR 0 374 26 208 351 75 11 chr2 9491813 9491907 -241195947 + MIR SINE MIR 47 146 -62 2851 184 13 0 chr2 9491963 9492518 -241195336 + L1MB3 LINE L1 4596 5157 -989 2037 98 0 0 chr2 9492545 9492872 -241194982 + AluSx SINE Alu 6 332 0 2408 149 16 24 chr2 9492872 9493325 -241194529 + L1MB3 LINE L1 5495 6172 -11 919 144 17 22 chr2 9493325 9493497 -241194357 + L1MB3 LINE L1 6005 6183 0 2408 149 16 24 chr2 9493497 9493509 -241194345 + L1MB3 LINE L1 6172 6183 0 1826 194 121 16 chr2 9493599 9494022 -241193832 + MLT1C LTR MaLR 1 467 0 501 291 22 6 chr2 9494576 9494758 -241193096 + MLT1J2 LTR MaLR 1 185 -265 26 64 0 0 chr2 9495711 9495758 -241192096 + GC_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 9495958 9495987 -241191867 + GC_rich Low_complexity Low_complexity 1 29 0 245 197 0 42 chr2 9495999 9496070 -241191784 + C-rich Low_complexity Low_complexity 6 73 0 23 0 0 0 chr2 9496094 9496117 -241191737 + GC_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 9496278 9496321 -241191533 + GC_rich Low_complexity Low_complexity 1 43 0 198 304 14 0 chr2 9496981 9497050 -241190804 + MIR SINE MIR 77 146 -62 22 0 0 0 chr2 9498410 9498432 -241189422 + AT_rich Low_complexity Low_complexity 1 22 0 633 259 68 18 chr2 9501454 9501674 -241186180 - L1MB7 LINE L1 -18 6166 5936 231 61 0 0 chr2 9502066 9502099 -241185755 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 577 219 42 8 chr2 9502111 9502230 -241185624 + FLAM_A SINE Alu 1 123 -10 1860 164 3 0 chr2 9502231 9502518 -241185336 - AluJo SINE Alu -19 293 6 195 267 65 40 chr2 9502528 9502647 -241185207 - MIR SINE MIR -67 141 23 811 188 2 14 chr2 9504945 9505468 -241182386 + (CAT)n Simple_repeat Simple_repeat 1 516 0 873 148 11 6 chr2 9505488 9505664 -241182190 + (CAT)n Simple_repeat Simple_repeat 1 177 0 835 169 0 22 chr2 9505640 9505824 -241182030 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 815 202 0 7 chr2 9505809 9506120 -241181734 + (CAT)n Simple_repeat Simple_repeat 1 308 0 * 263 258 56 45 chr2 9506846 9506935 -241180919 + MIR3 SINE MIR 103 192 -16 2389 88 0 10 chr2 9507040 9507345 -241180509 + AluSg SINE Alu 1 302 -8 2616 40 0 7 chr2 9508199 9508499 -241179355 + AluY SINE Alu 1 298 -13 398 255 103 14 chr2 9508547 9508692 -241179162 + L1ME4a LINE L1 5964 6121 0 2201 108 0 0 chr2 9508920 9509208 -241178646 + AluSx SINE Alu 7 294 -18 2177 137 0 0 chr2 9510607 9510907 -241176947 - AluSx SINE Alu -12 300 1 281 315 36 36 chr2 9510907 9511008 -241176846 - L2 LINE L2 -15 3298 3195 279 0 0 0 chr2 9512760 9512791 -241175063 + (GGGTG)n Simple_repeat Simple_repeat 4 34 0 264 59 0 0 chr2 9512921 9512955 -241174899 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2167 101 156 6 chr2 9513442 9513807 -241174047 + MSTA LTR MaLR 2 421 -7 264 59 0 0 chr2 9513926 9513960 -241173894 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 249 291 95 76 chr2 9513963 9514173 -241173681 - L2 LINE L2 -27 3286 3073 2605 122 26 0 chr2 9514175 9514592 -241173262 - MSTA LTR MaLR 0 428 1 2420 172 13 37 chr2 9514642 9515183 -241172671 - L1MB7 LINE L1 -14 6170 5643 1707 208 0 0 chr2 9515200 9515512 -241172342 - AluJo SINE Alu 0 312 1 438 261 45 15 chr2 9515513 9515647 -241172207 - L2 LINE L2 -241 3072 2935 665 264 159 85 chr2 9515747 9516100 -241171754 + MLT1J LTR MaLR 234 508 -3 430 230 8 71 chr2 9516912 9517038 -241170816 - L2 LINE L2 0 3313 3196 223 264 72 56 chr2 9517567 9517692 -241170162 + MIR SINE MIR 32 158 -104 2382 90 3 34 chr2 9518000 9518322 -241169532 - AluSx SINE Alu 0 312 1 480 119 0 151 chr2 9518341 9518467 -241169387 - FRAM SINE Alu -18 158 52 223 311 151 8 chr2 9518528 9518647 -241169207 - MIR SINE MIR -66 196 61 385 311 78 36 chr2 9520596 9520789 -241167065 + MIR SINE MIR 50 250 -12 442 263 8 17 chr2 9521376 9521494 -241166360 - MIR SINE MIR -63 145 29 211 208 75 0 chr2 9521484 9521537 -241166317 + L2 LINE L2 3206 3262 -10 * 1694 181 36 5 chr2 9521541 9521993 -241165861 + MLT2B2 LTR ERVL 1 519 -1 30 0 0 0 chr2 9522161 9522191 -241165663 + AT_rich Low_complexity Low_complexity 1 30 0 732 140 9 0 chr2 9522196 9522310 -241165544 - FLAM_C SINE Alu -20 123 9 1280 246 82 19 chr2 9522392 9522855 -241164999 + MLT1D LTR MaLR 1 492 -13 1519 196 48 16 chr2 9523602 9523975 -241163879 - MLT1B LTR MaLR 0 390 6 890 253 145 15 chr2 9525759 9526159 -241161695 - MER31B LTR ERV1 -5 461 10 1526 194 16 44 chr2 9527393 9527500 -241160354 + AluJo SINE Alu 3 111 -201 189 0 0 0 chr2 9527500 9527521 -241160333 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1526 194 16 44 chr2 9527521 9527732 -241160122 + AluJo SINE Alu 111 312 0 353 224 94 151 chr2 9527737 9527885 -241159969 - L1ME2 LINE L1 -240 5924 5794 1958 134 29 0 chr2 9527885 9528162 -241159692 - AluJb SINE Alu -22 290 6 353 224 94 151 chr2 9528162 9528258 -241159596 - L1ME2 LINE L1 -370 5794 5694 1412 194 168 60 chr2 9528274 9528789 -241159065 + MLT1F1 LTR MaLR 1 566 -1 535 297 34 32 chr2 9528822 9529142 -241158712 - L1ME2 LINE L1 -517 5645 5326 248 263 15 36 chr2 9529399 9529536 -241158318 - L1ME2 LINE L1 -770 5376 5243 385 307 199 0 chr2 9529539 9529705 -241158149 - L1ME4a LINE L1 -218 5903 5705 969 257 34 81 chr2 9529705 9529928 -241157926 - MLT1I LTR MaLR 0 409 210 1777 176 0 26 chr2 9529928 9530241 -241157613 - AluJo SINE Alu -6 306 2 969 257 34 81 chr2 9530241 9530402 -241157452 - MLT1I LTR MaLR -199 210 43 281 281 61 53 chr2 9530728 9530842 -241157012 - MIR SINE MIR -71 191 77 1077 203 17 17 chr2 9531271 9531508 -241156346 + L1MB7 LINE L1 5894 6130 -54 348 294 59 10 chr2 9531587 9531689 -241156165 + MIR SINE MIR 75 181 -81 377 263 0 10 chr2 9532072 9532171 -241155683 - MIR SINE MIR 0 262 165 236 219 16 16 chr2 9532282 9532346 -241155508 + L1MC5 LINE L1 7844 7907 -54 1195 115 0 0 chr2 9532352 9532509 -241155345 - AluSg/x SINE Alu -22 290 134 1580 103 58 137 chr2 9532509 9532838 -241155016 - AluYb8 SINE Alu -15 303 1 346 178 28 9 chr2 9532873 9532951 -241154903 - MIR SINE MIR -84 178 100 263 316 41 10 chr2 9533380 9533478 -241154376 + MIR SINE MIR 66 166 -96 266 294 64 9 chr2 9533755 9533864 -241153990 - MIR SINE MIR -130 132 18 1838 144 36 4 chr2 9534387 9534664 -241153190 + AluJb SINE Alu 21 306 -6 1410 172 24 58 chr2 9535065 9535381 -241152473 + AluJo SINE Alu 1 306 0 239 244 51 0 chr2 9535771 9535849 -241152005 - L2 LINE L2 -329 2984 2903 404 169 12 36 chr2 9537882 9538048 -241149806 + (TCTCTG)n Simple_repeat Simple_repeat 6 167 0 420 228 0 0 chr2 9538087 9538258 -241149596 + CT-rich Low_complexity Low_complexity 2 172 0 390 162 34 34 chr2 9538231 9538410 -241149444 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 404 239 115 8 chr2 9538486 9538616 -241149238 + MIR SINE MIR 62 205 -57 2026 146 14 0 chr2 9538654 9538942 -241148912 - AluJo SINE Alu -16 296 5 337 185 115 62 chr2 9538977 9539107 -241148747 - L1ME4a LINE L1 -3 6118 5982 209 129 0 48 chr2 9539188 9539250 -241148604 + (TG)n Simple_repeat Simple_repeat 1 59 0 2377 104 3 0 chr2 9541359 9541666 -241146188 + AluSx SINE Alu 3 310 -2 1853 166 0 48 chr2 9541671 9541984 -241145870 + AluJo SINE Alu 1 298 -14 2617 59 13 0 chr2 9542616 9542922 -241144932 + AluY SINE Alu 2 311 0 1864 132 75 4 chr2 9543509 9543789 -241144065 - AluJo SINE Alu -12 300 1 4035 155 46 9 chr2 9543789 9544665 -241143189 + L1MB8 LINE L1 5152 6058 -120 2002 162 0 3 chr2 9544665 9544974 -241142880 + AluJo SINE Alu 1 308 -4 2114 113 14 0 chr2 9545086 9545369 -241142485 - AluSx SINE Alu -2 310 24 274 333 0 11 chr2 9546295 9546382 -241141472 + MIR SINE MIR 60 145 -63 1895 135 26 26 chr2 9546747 9547051 -241140803 - AluJb SINE Alu -8 304 1 327 179 51 26 chr2 9547053 9547131 -241140723 + MER58 DNA MER1_type 174 253 -2167 303 255 103 49 chr2 9547245 9547449 -241140405 - L3 LINE CR1 -102 1475 1261 208 398 92 4 chr2 9548102 9548353 -241139501 - L2 LINE L2 -8 3264 2992 2950 6 0 0 chr2 9548359 9548670 -241139184 + AluYa5 SINE Alu 1 311 0 287 268 89 73 chr2 9549285 9549408 -241138446 - MIR SINE MIR -65 197 73 268 295 181 7 chr2 9549670 9549819 -241138035 - MIR SINE MIR -59 203 29 1450 132 5 0 chr2 9550107 9550312 -241137542 + AluJo SINE Alu 87 292 -20 288 235 4 12 chr2 9551450 9551532 -241136322 - FLAM SINE Alu -5 128 74 3132 142 55 110 chr2 9551536 9552366 -241135488 + LTR1 LTR ERV1 1 785 0 1993 111 31 14 chr2 9553607 9553896 -241133958 - AluSx SINE Alu -18 294 1 198 0 0 0 chr2 9554450 9554472 -241133382 + (GA)n Simple_repeat Simple_repeat 2 23 0 1973 151 31 0 chr2 9554906 9555197 -241132657 - AluSq SINE Alu -13 300 1 603 185 51 36 chr2 9555200 9555384 -241132470 - MIR SINE MIR -65 197 10 234 254 0 0 chr2 9556096 9556151 -241131703 - MIR SINE MIR -76 132 78 950 203 0 0 chr2 9556174 9556332 -241131522 + AluJb SINE Alu 147 304 -8 516 252 27 27 chr2 9556779 9556926 -241130928 + MER5A DNA MER1_type 38 184 -5 277 293 75 9 chr2 9556937 9557043 -241130811 + MIR SINE MIR 35 147 -115 1975 141 3 3 chr2 9557776 9558074 -241129780 - AluJb SINE Alu -14 298 1 2258 89 3 6 chr2 9559412 9559725 -241128129 - AluSx SINE Alu 0 312 1 1371 143 48 0 chr2 9560468 9560704 -241127150 - AluJo SINE Alu 0 310 65 330 268 0 0 chr2 9561070 9561193 -241126661 + (TG)n Simple_repeat Simple_repeat 2 124 0 526 268 6 3 chr2 9561266 9561580 -241126274 + (TG)n Simple_repeat Simple_repeat 1 315 0 273 290 187 0 chr2 9563993 9564100 -241123754 + MIR3 SINE MIR 33 159 -49 368 360 39 22 chr2 9565544 9565722 -241122132 - L2 LINE L2 -18 3254 3074 321 304 98 79 chr2 9568256 9568470 -241119384 - L1ME4a LINE L1 -30 6091 5874 558 335 66 12 chr2 9568748 9568990 -241118864 + MIR SINE MIR 2 256 -6 2169 145 124 0 chr2 9569083 9569462 -241118392 + MSTB LTR MaLR 1 426 0 364 188 124 0 chr2 9569507 9569624 -241118230 + L1ME1 LINE L1 6053 6184 0 2055 126 14 3 chr2 9569633 9569926 -241117928 - AluSx SINE Alu -16 296 1 309 249 29 58 chr2 9570026 9570244 -241117610 + (TATTG)n Simple_repeat Simple_repeat 1 211 0 225 0 0 0 chr2 9571413 9571438 -241116416 + (T)n Simple_repeat Simple_repeat 1 25 0 1007 275 41 9 chr2 9571581 9571923 -241115931 - MLT1A2 LTR MaLR -17 357 5 278 261 169 32 chr2 9571984 9572233 -241115621 - L1ME4a LINE L1 -8 6113 5831 1015 96 0 7 chr2 9572235 9572371 -241115483 + AluSq/x SINE Alu 1 135 -178 297 369 167 30 chr2 9572684 9573020 -241114834 + L3 LINE CR1 493 874 -703 688 288 73 67 chr2 9573818 9574134 -241113720 + L2 LINE L2 2954 3271 -1 4939 152 63 30 chr2 9574894 9575788 -241112066 + L1MC1 LINE L1 5411 6333 0 1806 142 4 0 chr2 9576280 9576555 -241111299 + AluJo SINE Alu 1 276 -36 2030 126 0 0 chr2 9576562 9576848 -241111006 - AluSx SINE Alu -22 290 5 210 71 0 0 chr2 9576867 9576895 -241110959 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1009 164 36 76 chr2 9576935 9577160 -241110694 - MER20 DNA MER1_type -2 217 2 219 36 0 0 chr2 9577206 9577234 -241110620 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 290 238 28 chr2 9577661 9577947 -241109907 - L2 LINE L2 -30 3242 2897 2084 80 76 0 chr2 9578029 9578304 -241109550 + AluSc SINE Alu 1 296 -13 186 271 212 42 chr2 9578506 9578624 -241109230 + MER5A DNA MER1_type 17 154 -35 246 289 106 0 chr2 9580958 9581062 -241106792 + MIR3 SINE MIR 47 161 -47 204 40 0 0 chr2 9581066 9581091 -241106763 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1001 220 119 42 chr2 9582010 9582189 -241105665 + MLT1A2 LTR MaLR 1 165 -209 3231 150 10 2 chr2 9582189 9582668 -241105186 + MER66B LTR ERV1 1 483 -3 1001 220 119 42 chr2 9582668 9582824 -241105030 + MLT1A2 LTR MaLR 165 362 -12 744 298 59 12 chr2 9582829 9583168 -241104686 - L1ME3A LINE L1 -258 5912 5558 1071 186 70 64 chr2 9584613 9584941 -241102913 - L1MB7 LINE L1 0 6184 5855 2091 98 0 7 chr2 9584951 9585237 -241102617 - AluSg1 SINE Alu -25 284 1 1730 168 7 0 chr2 9585238 9585530 -241102324 - AluJo SINE Alu -18 294 1 494 238 79 0 chr2 9585530 9585694 -241102160 - L1M4 LINE L1 -2561 3585 3409 798 258 58 48 chr2 9585732 9585997 -241101857 - MIR SINE MIR 0 262 1 246 269 156 50 chr2 9586586 9586727 -241101127 - MIR3 SINE MIR -19 189 34 1749 189 0 0 chr2 9587024 9587331 -241100523 + AluJo SINE Alu 3 309 -3 1035 234 58 23 chr2 9587691 9587981 -241099873 + L1MC1 LINE L1 6013 6316 -17 1840 171 7 3 chr2 9587981 9588286 -241099568 - AluJb SINE Alu -6 306 1 1035 234 58 23 chr2 9588286 9588303 -241099551 + L1MC1 LINE L1 6316 6331 -2 414 0 0 0 chr2 9588303 9588349 -241099505 + (CA)n Simple_repeat Simple_repeat 2 47 0 322 193 174 28 chr2 9588545 9588654 -241099200 - L2 LINE L2 -3 3269 3145 562 266 23 60 chr2 9588872 9589090 -241098764 + MIR SINE MIR 21 226 -36 1431 84 0 0 chr2 9592398 9592796 -241095058 + (CCA)n Simple_repeat Simple_repeat 1 398 0 458 327 199 6 chr2 9593053 9593414 -241094440 - L2 LINE L2 -20 3293 2863 306 148 0 0 chr2 9593933 9593987 -241093867 + (CA)n Simple_repeat Simple_repeat 1 54 0 215 234 0 0 chr2 9594834 9594881 -241092973 - L2 LINE L2 -10 3262 3216 2294 81 10 0 chr2 9595081 9595389 -241092465 - AluSx SINE Alu -1 311 1 244 369 117 0 chr2 9595434 9595545 -241092309 + L2 LINE L2 3139 3262 -10 26 30 0 0 chr2 9596430 9596463 -241091391 + AT_rich Low_complexity Low_complexity 1 33 0 193 340 19 19 chr2 9596483 9596589 -241091265 - MIR3 SINE MIR -21 187 82 450 0 0 0 chr2 9596644 9596694 -241091160 + (TG)n Simple_repeat Simple_repeat 1 50 0 2043 108 4 0 chr2 9596694 9596972 -241090882 - AluSx SINE Alu -33 279 1 382 263 78 62 chr2 9598234 9598413 -241089441 - MIR SINE MIR -56 206 25 237 191 0 48 chr2 9600578 9600641 -241087213 - L2 LINE L2 -12 3260 3201 568 284 214 23 chr2 9600645 9600987 -241086867 - L2 LINE L2 -3 3310 2904 262 360 80 28 chr2 9601013 9601263 -241086591 - L2 LINE L2 -96 3176 2914 1236 199 40 46 chr2 9602081 9602407 -241085447 - MER33 DNA MER1_type 0 324 1 2085 115 10 10 chr2 9602967 9603279 -241084575 - AluSx SINE Alu 0 312 1 279 190 0 0 chr2 9603593 9603651 -241084203 + T-rich Low_complexity Low_complexity 1 58 0 389 310 155 34 chr2 9604954 9605193 -241082661 - HAL1 LINE L1 -1837 670 403 799 288 35 63 chr2 9605215 9605390 -241082464 - MLT1J2 LTR MaLR -2 448 270 764 262 15 34 chr2 9605390 9605596 -241082258 + MER105 DNA DNA 1 202 -2 799 288 35 63 chr2 9605596 9605847 -241082007 - MLT1J2 LTR MaLR -180 270 34 186 276 40 40 chr2 9605886 9605962 -241081892 + L2 LINE L2 204 279 -3035 198 262 0 0 chr2 9607218 9607260 -241080594 + MIR SINE MIR 35 76 -186 1785 163 15 66 chr2 9607474 9607867 -241079987 - MLT1B LTR MaLR -17 373 1 329 150 175 0 chr2 9609377 9609457 -241078397 - MLT1C LTR MaLR -369 98 5 567 140 20 20 chr2 9609715 9609815 -241078039 + FLAM_C SINE Alu 34 133 -10 2275 106 0 0 chr2 9610270 9610573 -241077281 + AluSq SINE Alu 1 303 -10 262 296 28 0 chr2 9610674 9610782 -241077072 - L1MC4a LINE L1 -1869 5939 5829 314 290 76 0 chr2 9610796 9610927 -241076927 - L1MC4a LINE L1 -2084 5724 5584 1616 186 21 0 chr2 9610961 9611246 -241076608 + AluJo SINE Alu 13 303 -9 1784 131 42 48 chr2 9611324 9611448 -241076406 + AluSx SINE Alu 1 124 -188 228 35 0 0 chr2 9611448 9611477 -241076377 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1784 131 42 48 chr2 9611477 9611664 -241076190 + AluSx SINE Alu 124 310 -2 2237 112 0 3 chr2 9612117 9612431 -241075423 + AluSq SINE Alu 1 313 0 1419 171 91 25 chr2 9613399 9613685 -241074169 - AluSq SINE Alu -8 305 1 245 328 172 0 chr2 9613804 9613938 -241073916 - MIR SINE MIR -2 260 104 2033 129 10 0 chr2 9613953 9614247 -241073607 - AluSx SINE Alu -15 297 1 1881 161 3 0 chr2 9614621 9614920 -241072934 + AluJo SINE Alu 13 312 0 384 329 97 35 chr2 9615773 9616001 -241071853 - L1ME3 LINE L1 -1 6161 5920 241 298 53 10 chr2 9616439 9616558 -241071296 + MIR SINE MIR 38 159 -66 2474 53 0 3 chr2 9617000 9617300 -241070554 + AluY SINE Alu 1 299 -12 199 267 218 10 chr2 9617600 9617701 -241070153 + MIR SINE MIR 141 262 0 236 341 34 0 chr2 9618765 9618853 -241069001 - MIR SINE MIR -78 184 94 753 186 0 0 chr2 9621318 9621447 -241066407 - FLAM_A SINE Alu 0 133 5 232 214 36 0 chr2 9622357 9622413 -241065441 - MLT2A2 LTR ERVL -3 450 393 801 196 0 0 chr2 9622414 9622681 -241065173 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 975 147 0 0 chr2 9622700 9622877 -241064977 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 825 176 0 0 chr2 9622893 9623069 -241064785 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 1053 206 142 55 chr2 9623077 9623513 -241064341 - MLT2B1 LTR ERVL -46 474 1 2284 89 13 0 chr2 9623812 9624114 -241063740 + AluY SINE Alu 1 306 -5 186 185 222 0 chr2 9624232 9624286 -241063568 - L3 LINE CR1 -408 1169 1104 287 309 37 0 chr2 9624612 9624693 -241063161 - L3 LINE CR1 -533 1044 961 511 299 86 8 chr2 9624731 9624969 -241062885 - MIR SINE MIR 0 262 15 187 93 47 0 chr2 9626359 9626402 -241061452 + (TG)n Simple_repeat Simple_repeat 1 45 0 310 162 54 24 chr2 9626421 9626721 -241061133 + (TG)n Simple_repeat Simple_repeat 1 309 0 330 118 45 56 chr2 9626755 9626933 -241060921 + (TG)n Simple_repeat Simple_repeat 1 176 0 200 220 50 10 chr2 9627607 9627707 -241060147 + (TG)n Simple_repeat Simple_repeat 1 104 0 293 245 11 43 chr2 9628512 9628606 -241059248 + MER53 DNA DNA 4 94 -95 * 419 248 38 0 chr2 9628526 9628631 -241059223 - MER53 DNA DNA -4 185 77 322 233 103 9 chr2 9629428 9629544 -241058310 + MIR3 SINE MIR 15 141 -67 236 337 45 28 chr2 9630651 9630829 -241057025 - L1MC4a LINE L1 -1838 5970 5790 353 258 212 23 chr2 9630891 9631151 -241056703 - L1MC4a LINE L1 -2140 5668 5324 1991 126 14 7 chr2 9631151 9631444 -241056410 + AluSx SINE Alu 1 295 -17 353 258 212 23 chr2 9631444 9631532 -241056322 - L1MC4a LINE L1 -2484 5324 5254 212 275 18 83 chr2 9631681 9631790 -241056064 + MER5A DNA MER1_type 70 171 -18 235 288 88 0 chr2 9631707 9631787 -241056067 - MER5B DNA MER1_type -70 108 22 1731 167 31 0 chr2 9634149 9634436 -241053418 - AluJb SINE Alu -16 296 1 2023 108 7 7 chr2 9635900 9636188 -241051666 - AluJb SINE Alu -12 300 13 2083 98 0 0 chr2 9638827 9639101 -241048753 - AluSx SINE Alu -15 297 24 2283 75 3 23 chr2 9639321 9639628 -241048226 - AluSp SINE Alu -12 301 1 21 82 0 0 chr2 9640169 9640218 -241047636 + AT_rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr2 9641229 9641270 -241046584 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 9641389 9641410 -241046444 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 9641473 9641500 -241046354 + GC_rich Low_complexity Low_complexity 1 27 0 26 93 0 0 chr2 9641613 9641688 -241046166 + GC_rich Low_complexity Low_complexity 1 75 0 278 128 26 26 chr2 9641744 9641822 -241046032 + (CCCCG)n Simple_repeat Simple_repeat 4 81 0 22 0 0 0 chr2 9641871 9641893 -241045961 + GC_rich Low_complexity Low_complexity 1 22 0 366 244 12 0 chr2 9642769 9642851 -241045003 + MIR SINE MIR 42 124 -84 189 121 0 0 chr2 9642962 9642995 -241044859 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2170 116 13 0 chr2 9644024 9644325 -241043529 - AluSx SINE Alu -7 305 1 357 328 37 8 chr2 9644480 9644614 -241043240 + MIR3 SINE MIR 65 202 -6 186 43 0 0 chr2 9644770 9644793 -241043061 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2021 112 0 0 chr2 9644801 9645077 -241042777 - AluSx SINE Alu -36 276 1 663 322 25 12 chr2 9645381 9645704 -241042150 + MARNA DNA Mariner 231 557 -29 2115 116 0 13 chr2 9645883 9646186 -241041668 - AluSx SINE Alu -13 299 1 258 262 68 19 chr2 9647412 9647515 -241040339 - L2 LINE L2 -25 3247 3140 183 100 0 0 chr2 9648161 9648191 -241039663 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 427 301 75 0 chr2 9648481 9648667 -241039187 - MLT1L LTR MaLR -52 563 364 576 182 115 24 chr2 9648884 9649049 -241038805 + MLT1C LTR MaLR 1 180 -210 1382 161 4 37 chr2 9649049 9649292 -241038562 + AluJo SINE Alu 1 235 -77 1026 217 64 4 chr2 9649313 9649562 -241038292 + MLT1C LTR MaLR 199 462 -5 357 195 164 23 chr2 9649788 9649916 -241037938 + MLT1G LTR MaLR 443 588 -2 463 283 193 0 chr2 9650031 9650197 -241037657 + MIR SINE MIR 17 214 -48 2010 223 63 92 chr2 9650204 9650261 -241037593 - MER97a DNA MER1_type? -11 883 826 3156 77 36 32 chr2 9650261 9650703 -241037151 - MLT2A1 LTR ERVL 0 444 1 2010 223 63 92 chr2 9650703 9651552 -241036302 - MER97a DNA MER1_type? -68 826 3 2270 79 3 7 chr2 9651884 9652187 -241035667 + AluY SINE Alu 1 302 -9 2040 134 7 0 chr2 9653054 9653353 -241034501 - AluSx SINE Alu -9 303 3 798 227 0 45 chr2 9654568 9654686 -241033168 + MER3 DNA MER1_type 21 128 -81 2307 99 3 0 chr2 9654686 9654990 -241032864 - AluSq SINE Alu -8 305 1 798 227 0 45 chr2 9654990 9655069 -241032785 + MER3 DNA MER1_type 128 209 0 506 303 11 43 chr2 9655813 9655998 -241031856 + MIR3 SINE MIR 15 193 -15 571 265 46 7 chr2 9656215 9656366 -241031488 + MIR SINE MIR 20 176 -86 1043 113 0 0 chr2 9656434 9656575 -241031279 + AluJb SINE Alu 1 141 -171 189 0 0 0 chr2 9656593 9656614 -241031240 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1597 139 44 26 chr2 9656632 9656905 -241030949 + AluJo SINE Alu 5 282 -30 459 78 0 0 chr2 9656999 9657063 -241030791 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 883 143 88 42 chr2 9657162 9657379 -241030475 - L1MC2 LINE L1 -9 6335 6109 1428 149 0 69 chr2 9657390 9657666 -241030188 - AluJb SINE Alu -6 306 50 421 293 38 25 chr2 9657891 9658048 -241029806 + MER5B DNA MER1_type 11 169 -9 186 273 94 55 chr2 9658083 9658149 -241029705 + MER5B DNA MER1_type 36 98 -80 2052 121 17 0 chr2 9658149 9658447 -241029407 - AluSx SINE Alu -8 304 2 2656 50 0 0 chr2 9658457 9658754 -241029100 - AluY SINE Alu -14 297 1 186 273 94 55 chr2 9658754 9658804 -241029050 + MER5B DNA MER1_type 106 168 -10 1910 155 20 0 chr2 9659368 9659665 -241028189 + AluJo SINE Alu 1 303 -9 715 118 0 152 chr2 9660921 9660954 -241026900 - L1MB5 LINE L1 -10 6164 6128 225 0 0 0 chr2 9660954 9660979 -241026875 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2100 127 0 0 chr2 9660979 9661262 -241026592 - AluSx SINE Alu -29 283 1 715 118 0 152 chr2 9661262 9661291 -241026563 - L1MB5 LINE L1 -45 6129 6097 2336 74 3 0 chr2 9661291 9661597 -241026257 + AluSp SINE Alu 1 307 0 715 118 0 152 chr2 9661597 9661708 -241026146 - L1MB5 LINE L1 -77 6097 6014 1936 149 3 14 chr2 9661756 9662051 -241025803 - AluJo SINE Alu -20 292 1 491 229 186 32 chr2 9663685 9663873 -241023981 - MIR SINE MIR -17 245 29 468 258 94 52 chr2 9664215 9664428 -241023426 + MIR SINE MIR 20 241 -21 649 244 34 11 chr2 9664720 9664896 -241022958 + MIR SINE MIR 36 215 -47 23 54 0 0 chr2 9665055 9665092 -241022762 + AT_rich Low_complexity Low_complexity 1 37 0 204 316 25 0 chr2 9665167 9665246 -241022608 - MIR SINE MIR -29 233 153 1900 161 3 7 chr2 9665922 9666227 -241021627 - AluJb SINE Alu -8 304 1 2729 40 0 0 chr2 9667070 9667372 -241020482 - AluY SINE Alu -9 302 1 704 103 154 0 chr2 9667673 9667790 -241020064 - AluJb SINE Alu -176 136 2 188 290 14 0 chr2 9668368 9668437 -241019417 - MIR SINE MIR -61 147 78 517 127 59 3 chr2 9669854 9670074 -241017780 + AluSx SINE Alu 1 308 -4 608 246 24 12 chr2 9670232 9670399 -241017455 + MER20 DNA MER1_type 36 204 -15 261 98 0 0 chr2 9670470 9670511 -241017343 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 245 300 71 41 chr2 9670565 9670735 -241017119 - L2 LINE L2 -101 3171 2997 254 300 25 0 chr2 9671748 9671828 -241016026 + L2 LINE L2 2997 3078 -194 330 298 141 16 chr2 9672998 9673189 -241014665 - MIR SINE MIR 0 262 48 1058 189 0 0 chr2 9673260 9673424 -241014430 - AluJo SINE Alu -14 298 135 318 50 0 0 chr2 9673425 9673465 -241014389 + (TTTTC)n Simple_repeat Simple_repeat 1 40 0 374 183 0 12 chr2 9673476 9673558 -241014296 + CT-rich Low_complexity Low_complexity 2 82 0 366 357 138 19 chr2 9673558 9673981 -241013873 - HAL1 LINE L1 -1206 1301 881 637 197 7 7 chr2 9673982 9674134 -241013720 + CT-rich Low_complexity Low_complexity 1 152 0 333 177 76 13 chr2 9674134 9674213 -241013641 - AluJo SINE Alu -169 133 50 187 98 0 49 chr2 9674224 9674265 -241013589 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 530 228 49 0 chr2 9674267 9674390 -241013464 - AluJo SINE Alu -173 129 1 421 304 30 0 chr2 9674786 9674921 -241012933 + MLT1H LTR MaLR 406 544 -5 2987 241 70 14 chr2 9675367 9676126 -241011728 - MER21B LTR ERV1 -44 819 19 267 238 60 12 chr2 9676124 9676208 -241011646 - MER21B LTR ERV1 -757 106 19 * 373 186 10 98 chr2 9676207 9676309 -241011545 - MER21B LTR ERV1 -758 105 13 448 297 145 56 chr2 9676729 9677248 -241010606 - L1ME4a LINE L1 -104 6017 5401 2320 122 0 0 chr2 9677248 9677560 -241010294 + AluSx SINE Alu 1 312 0 448 297 145 56 chr2 9677560 9677723 -241010131 - L1ME4a LINE L1 -720 5401 5254 390 314 66 39 chr2 9678023 9678281 -241009573 - L1ME4a LINE L1 -1276 4870 4606 694 167 0 9 chr2 9678292 9678406 -241009448 + FLAM_C SINE Alu 14 126 -17 43 20 0 0 chr2 9678417 9678467 -241009387 + AT_rich Low_complexity Low_complexity 1 50 0 494 297 100 46 chr2 9678467 9679138 -241008716 - L1ME4a LINE L1 -1526 4620 3914 315 0 0 0 chr2 9679151 9679186 -241008668 + (TG)n Simple_repeat Simple_repeat 1 35 0 308 209 185 61 chr2 9679356 9679653 -241008201 + L1ME4a LINE L1 5788 6121 0 377 294 14 25 chr2 9679950 9680124 -241007730 + MIR SINE MIR 17 188 -60 917 263 58 11 chr2 9681793 9682158 -241005696 - HAL1 LINE L1 -1126 1381 1000 247 279 93 66 chr2 9682262 9682393 -241005461 - HAL1 LINE L1 -1651 856 717 2726 36 0 7 chr2 9682393 9682700 -241005154 - AluY SINE Alu -6 305 1 247 279 93 66 chr2 9682700 9682751 -241005103 - HAL1 LINE L1 -1790 717 669 2214 128 0 6 chr2 9683698 9684011 -241003843 - AluSx SINE Alu -1 311 1 273 324 46 17 chr2 9684356 9684529 -241003325 + L3 LINE CR1 1056 1233 -344 2741 205 13 8 chr2 9684546 9685160 -241002694 + L1MB7 LINE L1 4465 5081 -1065 1485 114 5 0 chr2 9685188 9685381 -241002473 + AluSq SINE Alu 1 194 -119 2415 162 54 2 chr2 9685420 9685901 -241001953 + L1MB7 LINE L1 5660 6165 -19 2362 108 0 3 chr2 9686050 9686355 -241001499 + AluSq SINE Alu 1 304 -9 380 290 30 77 chr2 9686375 9686544 -241001310 + L3 LINE CR1 1415 1575 -2 345 227 0 52 chr2 9687427 9687524 -241000330 - MIR SINE MIR -78 130 39 910 140 11 11 chr2 9688137 9688316 -240999538 + CT-rich Low_complexity Low_complexity 2 180 0 223 147 0 0 chr2 9688316 9688350 -240999504 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1071 261 70 6 chr2 9688352 9688666 -240999188 - L1ME LINE L1 -357 5807 5474 2090 102 7 21 chr2 9689442 9689754 -240998100 - AluSx SINE Alu 0 309 2 307 247 34 0 chr2 9690343 9690432 -240997422 - L1MC5 LINE L1 -62 7899 7808 822 157 0 15 chr2 9690586 9690720 -240997134 + FLAM_C SINE Alu 1 132 -1 447 285 99 17 chr2 9690772 9690944 -240996910 - MIR SINE MIR -15 247 62 21 36 0 0 chr2 9691200 9691228 -240996626 + GC_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr2 9691727 9691754 -240996100 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2213 137 0 0 chr2 9691773 9692080 -240995774 + AluSx SINE Alu 1 307 -5 315 254 0 0 chr2 9692115 9692182 -240995672 - MIR SINE MIR -106 156 90 360 233 78 0 chr2 9692193 9692283 -240995571 - MER91A DNA MER1_type -11 185 89 384 262 37 9 chr2 9692759 9692866 -240994988 + L3 LINE CR1 1377 1486 -91 593 269 88 0 chr2 9693727 9693898 -240993956 + MIR SINE MIR 77 262 0 325 234 72 36 chr2 9696908 9697019 -240990835 + MIR SINE MIR 65 179 -83 2239 114 10 0 chr2 9697245 9697551 -240990303 + AluSg SINE Alu 1 309 -1 230 312 18 37 chr2 9697940 9698049 -240989805 + MIR3 SINE MIR 93 199 -9 196 259 37 0 chr2 9699173 9699227 -240988627 + MER5A DNA MER1_type 60 115 -74 1917 123 0 49 chr2 9699278 9699586 -240988268 + AluSx SINE Alu 1 293 -19 520 303 135 14 chr2 9700724 9701021 -240986833 + L1ME4a LINE L1 5534 5866 -255 1701 110 0 9 chr2 9701022 9701250 -240986604 - AluJb SINE Alu -15 297 72 7386 210 60 34 chr2 9701250 9702137 -240985717 + L1ME1 LINE L1 3439 4301 -1865 1846 178 3 3 chr2 9702137 9702441 -240985413 + AluJb SINE Alu 1 304 -8 7386 210 60 34 chr2 9702441 9704193 -240983661 + L1ME1 LINE L1 4301 6160 -6 339 281 0 73 chr2 9705147 9705311 -240982543 + L1ME4a LINE L1 5967 6118 -3 387 0 0 0 chr2 9705315 9705358 -240982496 + (GA)n Simple_repeat Simple_repeat 1 43 0 252 0 0 0 chr2 9705357 9705385 -240982469 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 463 216 114 17 chr2 9705703 9705917 -240981937 - L1ME3 LINE L1 -9 6161 5902 268 213 0 43 chr2 9705920 9706108 -240981746 + (TA)n Simple_repeat Simple_repeat 1 180 0 217 203 0 41 chr2 9706120 9706243 -240981611 + (TA)n Simple_repeat Simple_repeat 2 119 0 794 300 92 13 chr2 9706262 9706642 -240981212 - L1ME3 LINE L1 -254 5916 5507 2282 105 10 0 chr2 9706835 9707141 -240980713 + AluSx SINE Alu 1 309 -3 425 270 93 39 chr2 9707679 9707883 -240979971 + MIR SINE MIR 45 259 -3 209 300 120 27 chr2 9708385 9708535 -240979319 + MIR3 SINE MIR 7 170 -38 1193 284 40 55 chr2 9709061 9709632 -240978222 - L1MEd LINE L1 -4869 1250 691 2352 112 0 3 chr2 9709632 9709936 -240977918 - AluSc SINE Alu -6 303 1 1193 284 40 55 chr2 9709936 9710218 -240977636 - L1MEd LINE L1 -5428 691 406 613 286 133 49 chr2 9710600 9710985 -240976869 - MLT1L LTR MaLR 0 615 199 769 64 54 25 chr2 9711278 9711593 -240976261 + (CA)n Simple_repeat Simple_repeat 1 324 0 643 76 64 18 chr2 9711606 9711777 -240976077 + (CA)n Simple_repeat Simple_repeat 2 180 0 462 119 63 13 chr2 9711809 9711968 -240975886 + (CA)n Simple_repeat Simple_repeat 2 168 0 441 334 85 23 chr2 9712624 9712946 -240974908 + L2 LINE L2 2931 3312 -1 303 287 45 38 chr2 9712973 9713130 -240974724 + L1ME4a LINE L1 5830 5987 -134 1666 196 17 26 chr2 9713666 9714013 -240973841 - MLT1A2 LTR MaLR -7 367 24 180 0 0 0 chr2 9714336 9714356 -240973498 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 365 285 46 31 chr2 9714554 9714684 -240973170 + MLT1B LTR MaLR 235 366 -24 291 279 95 7 chr2 9715554 9715701 -240972153 + (CCCCG)n Simple_repeat Simple_repeat 5 164 0 367 247 137 47 chr2 9716831 9717086 -240970768 - MLT1D LTR MaLR -144 361 84 244 250 22 76 chr2 9717792 9717884 -240969970 + MIR3 SINE MIR 101 187 -21 1178 143 46 6 chr2 9717901 9718277 -240969577 - MSTB LTR MaLR 0 426 1 253 346 59 7 chr2 9718281 9718417 -240969437 - MIR SINE MIR -12 250 108 233 276 75 0 chr2 9719436 9719549 -240968305 - MIR SINE MIR -69 139 30 2378 83 3 0 chr2 9720154 9720456 -240967398 - AluSx SINE Alu -9 303 1 580 237 52 65 chr2 9720547 9720779 -240967075 + MIR SINE MIR 23 251 -11 1571 256 81 5 chr2 9720855 9721276 -240966578 - MLT1J LTR MaLR -58 453 1 2058 112 7 0 chr2 9721331 9721625 -240966229 - AluY SINE Alu -15 296 1 2288 54 3 45 chr2 9721634 9721947 -240965907 - AluY SINE Alu -11 300 1 1750 120 6 70 chr2 9722236 9722552 -240965302 + AluJb SINE Alu 1 296 -16 318 298 118 45 chr2 9722555 9722800 -240965054 + L1ME4a LINE L1 5812 6074 -47 2205 81 3 10 chr2 9723096 9723391 -240964463 - AluSq SINE Alu -16 297 5 1872 140 20 3 chr2 9723396 9723689 -240964165 - AluSx SINE Alu -14 298 1 237 222 0 0 chr2 9723980 9724025 -240963829 + MIR3 SINE MIR 112 156 -52 471 189 0 115 chr2 9724494 9724616 -240963238 + FLAM_A SINE Alu 1 108 -34 2250 103 3 0 chr2 9724757 9725068 -240962786 + AluSq SINE Alu 1 312 -1 1853 208 84 18 chr2 9725337 9725775 -240962079 + MLT1C LTR MaLR 1 467 0 482 319 65 10 chr2 9725929 9726199 -240961655 - ERVL LTR ERVL -1974 3550 3210 2055 139 0 0 chr2 9726535 9726844 -240961010 - AluSx SINE Alu -2 310 2 441 237 65 53 chr2 9728444 9728613 -240959241 + MIR SINE MIR 20 190 -72 308 299 331 0 chr2 9728654 9728811 -240959043 - MIR SINE MIR -48 214 6 240 298 32 48 chr2 9729093 9729217 -240958637 - MIR SINE MIR -68 194 73 220 226 16 16 chr2 9729923 9729985 -240957869 - MER5B DNA MER1_type -110 68 7 1700 78 5 0 chr2 9730467 9730686 -240957168 + AluSg/x SINE Alu 80 299 -11 2212 101 0 7 chr2 9731310 9731618 -240956236 + AluSq SINE Alu 1 306 -7 1619 158 13 43 chr2 9732027 9732331 -240955523 + AluJo SINE Alu 1 295 -17 369 209 6 122 chr2 9732377 9732549 -240955305 + Charlie7 DNA MER1_type 317 468 -2144 2076 257 64 43 chr2 9732566 9733282 -240954572 + MER21B LTR ERV1 22 752 -111 3418 236 111 90 chr2 9733315 9733640 -240954214 + Charlie7 DNA MER1_type 523 840 -1772 2137 99 6 16 chr2 9733640 9733953 -240953901 - AluY SINE Alu -1 310 1 3418 236 111 90 chr2 9733953 9733975 -240953879 + Charlie7 DNA MER1_type 840 860 -1752 1808 136 7 20 chr2 9733975 9734276 -240953578 - AluJo SINE Alu -15 297 1 3418 236 111 90 chr2 9734276 9734656 -240953198 + Charlie7 DNA MER1_type 860 1231 -1381 2633 39 0 0 chr2 9734656 9734967 -240952887 + AluY SINE Alu 1 311 0 3418 236 111 90 chr2 9734967 9735609 -240952245 + Charlie7 DNA MER1_type 1231 1858 -754 2198 96 7 13 chr2 9735609 9735912 -240951942 - AluSx SINE Alu -11 301 1 3418 236 111 90 chr2 9735912 9736485 -240951369 + Charlie7 DNA MER1_type 1858 2512 -100 2067 114 0 13 chr2 9736485 9736804 -240951050 + AluSg SINE Alu 1 310 0 3418 236 111 90 chr2 9736804 9736838 -240951016 + Charlie7 DNA MER1_type 2512 2544 -68 2251 78 7 3 chr2 9736848 9737156 -240950698 + AluYb8 SINE Alu 2 310 -8 967 303 149 15 chr2 9737181 9737689 -240950165 + MLT1H1 LTR MaLR 26 555 0 649 139 18 96 chr2 9737787 9737820 -240950034 - L1MB3 LINE L1 -2 6181 6147 2232 97 0 3 chr2 9737820 9738119 -240949735 + AluSx SINE Alu 1 298 -14 359 21 21 0 chr2 9738123 9738171 -240949683 + (CA)n Simple_repeat Simple_repeat 2 50 0 649 139 18 96 chr2 9738171 9738298 -240949556 - L1MB3 LINE L1 -39 6144 6029 1050 84 0 14 chr2 9738301 9738444 -240949410 + AluSq/x SINE Alu 1 141 -171 2087 121 6 10 chr2 9738444 9738758 -240949096 + AluSq SINE Alu 1 313 0 963 170 37 54 chr2 9738758 9738970 -240948884 - L1MB3 LINE L1 -144 6039 5830 1823 137 9 44 chr2 9738970 9739139 -240948715 - AluSx SINE Alu -8 304 150 606 63 0 0 chr2 9739139 9739218 -240948636 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1823 137 9 44 chr2 9739218 9739363 -240948491 - AluSx SINE Alu -162 150 1 963 170 37 54 chr2 9739363 9739391 -240948463 - L1MB3 LINE L1 -353 5830 5803 2009 128 7 0 chr2 9739391 9739687 -240948167 + AluSx SINE Alu 1 298 -14 190 344 133 31 chr2 9739942 9740198 -240947656 + L2 LINE L2 2991 3272 0 185 338 39 13 chr2 9740323 9740400 -240947454 + MIR SINE MIR 32 110 -152 2015 188 114 53 chr2 9740526 9741015 -240946839 + MLT2B1 LTR ERVL 2 520 0 389 256 120 23 chr2 9742615 9742748 -240945106 - MLT1J LTR MaLR -219 292 147 3663 153 52 48 chr2 9744174 9744299 -240943555 + MER50 LTR ERV1 1 124 -610 2090 117 16 0 chr2 9744299 9744606 -240943248 + AluSx SINE Alu 1 312 0 3663 153 52 48 chr2 9744606 9745210 -240942644 + MER50 LTR ERV1 124 733 -1 264 77 0 0 chr2 9745276 9745315 -240942539 + (TC)n Simple_repeat Simple_repeat 1 39 0 693 170 67 0 chr2 9745522 9745657 -240942197 - MLT1C LTR MaLR 0 467 324 2148 98 10 3 chr2 9746636 9746933 -240940921 + AluSq SINE Alu 1 299 -14 1213 253 10 3 chr2 9746933 9747237 -240940617 + L1MB4 LINE L1 5598 5903 -277 1257 189 70 5 chr2 9747570 9747858 -240939996 + L1MB3 LINE L1 5833 6141 -42 2428 75 3 0 chr2 9747860 9748166 -240939688 + AluSp SINE Alu 1 307 -6 1202 237 48 0 chr2 9749263 9749575 -240938279 - L1MC3 LINE L1 0 7785 7459 182 282 0 0 chr2 9749576 9749615 -240938239 + L2 LINE L2 3139 3177 -95 742 258 32 53 chr2 9749982 9750265 -240937589 + MLT1C LTR MaLR 189 465 -2 462 270 88 7 chr2 9750276 9750424 -240937430 - L2 LINE L2 0 3313 3154 2075 128 0 0 chr2 9750432 9750736 -240937118 + AluSx SINE Alu 3 306 -6 237 222 32 63 chr2 9751504 9751567 -240936287 - L2 LINE L2 0 3272 3212 262 262 68 0 chr2 9752284 9752387 -240935467 - MIR SINE MIR -131 131 22 343 258 37 47 chr2 9753111 9753304 -240934550 - MIR SINE MIR -56 206 14 180 259 37 12 chr2 9753595 9753676 -240934178 + L2 LINE L2 2860 2942 -371 560 171 199 0 chr2 9753680 9753826 -240934028 + MER5A DNA MER1_type 1 175 -14 294 288 75 7 chr2 9753828 9753974 -240933880 + L2 LINE L2 2953 3108 -205 2175 109 3 7 chr2 9755861 9756165 -240931689 - AluSq SINE Alu -10 303 1 321 268 101 57 chr2 9756487 9756715 -240931139 - MER112 DNA MER1_type -6 254 17 996 75 0 0 chr2 9756723 9756857 -240930997 + AluSg/x SINE Alu 176 309 -3 2202 107 7 7 chr2 9756861 9757169 -240930685 + AluSc SINE Alu 2 309 0 2138 121 3 6 chr2 9757228 9757541 -240930313 + AluSx SINE Alu 1 312 0 512 244 71 56 chr2 9757706 9757903 -240929951 + L2 LINE L2 1381 1580 -1734 382 249 116 35 chr2 9757943 9758116 -240929738 + MER53 DNA DNA 3 189 0 * 1283 199 106 23 chr2 9758116 9758506 -240929348 + MLT1F LTR MaLR 104 542 0 719 264 147 15 chr2 9758516 9758842 -240929012 + L2 LINE L2 1590 1958 -1356 405 272 12 74 chr2 9758843 9759005 -240928849 - L2 LINE L2 -2 3311 3160 370 267 93 25 chr2 9759014 9759175 -240928679 + L1MC5 LINE L1 7730 7901 -60 608 292 51 4 chr2 9759275 9759544 -240928310 - L2 LINE L2 -298 3015 2726 1094 236 8 4 chr2 9759571 9759830 -240928024 + AluJo SINE Alu 21 280 -32 408 326 36 41 chr2 9759860 9760056 -240927798 + L2 LINE L2 2334 2528 -786 2473 100 0 0 chr2 9760564 9760875 -240926979 + AluSx SINE Alu 1 311 -1 605 274 54 0 chr2 9760889 9761057 -240926797 + L1PB4 LINE L1 5966 6142 -14 443 216 48 84 chr2 9761129 9761296 -240926558 + L1MC4a LINE L1 5764 5924 -1884 1706 92 0 0 chr2 9761439 9761656 -240926198 - AluY SINE Alu 0 311 95 617 41 0 0 chr2 9761656 9761729 -240926125 + AluY SINE Alu 27 99 -212 374 284 106 29 chr2 9762538 9762746 -240925108 - MIR SINE MIR -31 231 8 298 276 14 48 chr2 9763393 9763538 -240924316 + GA-rich Low_complexity Low_complexity 4 143 0 636 183 58 8 chr2 9763785 9763905 -240923949 - FLAM_A SINE Alu -8 134 9 1075 182 43 34 chr2 9764102 9764275 -240923579 - MER46A DNA MER2_type -2495 236 59 2027 152 139 16 chr2 9764275 9764656 -240923198 + MSTA LTR MaLR 1 428 0 1075 182 43 34 chr2 9764656 9764691 -240923163 - MER46A DNA MER2_type -2672 59 26 2365 89 0 0 chr2 9766387 9766680 -240921174 - AluSc SINE Alu -16 293 1 185 415 13 21 chr2 9766960 9767194 -240920660 + L2 LINE L2 2505 2736 -578 239 319 34 50 chr2 9767243 9767362 -240920492 + L2 LINE L2 3073 3189 -83 2345 98 0 0 chr2 9767554 9767851 -240920003 + AluY SINE Alu 1 297 -14 4132 173 40 12 chr2 9769244 9770066 -240917788 + L1MB7 LINE L1 5321 6165 -19 262 281 99 23 chr2 9772462 9772633 -240915221 - MIR SINE MIR -46 216 33 570 43 0 0 chr2 9772902 9772972 -240914882 + MER41B LTR ERV1 478 547 -88 252 250 31 0 chr2 9773528 9773592 -240914262 + C-rich Low_complexity Low_complexity 4 69 0 22 0 0 0 chr2 9774161 9774183 -240913671 + AT_rich Low_complexity Low_complexity 1 22 0 405 321 132 5 chr2 9774334 9774524 -240913330 + L1MB8 LINE L1 5448 5661 -2147 1678 153 29 4 chr2 9774733 9775014 -240912840 + AluJo SINE Alu 1 288 -24 243 261 87 33 chr2 9775478 9775570 -240912284 + L2 LINE L2 3158 3254 -18 190 381 137 6 chr2 9776522 9776837 -240911017 + L2 LINE L2 2127 2482 -832 284 329 0 12 chr2 9778323 9778408 -240909446 - L2 LINE L2 -9 3304 3221 2848 179 38 30 chr2 9778500 9778809 -240909045 + L1MB8 LINE L1 5509 5814 -364 2027 140 49 6 chr2 9778809 9779137 -240908717 + MER2 DNA MER2_type 2 343 -1 2848 179 38 30 chr2 9779137 9779459 -240908395 + L1MB8 LINE L1 5814 6145 -33 254 224 0 0 chr2 9779462 9779511 -240908343 + L1MB8 LINE L1 6097 6145 -33 251 224 0 0 chr2 9779514 9779563 -240908291 + L1MB8 LINE L1 6097 6145 -33 424 209 0 0 chr2 9779566 9779652 -240908202 + L1MB7 LINE L1 6099 6184 0 413 152 30 0 chr2 9779703 9779769 -240908085 + Tigger2 DNA MER2_type 2 69 -2649 * 1903 146 56 11 chr2 9779755 9780111 -240907743 + Tigger2 DNA MER2_type 2270 2641 -77 1137 120 0 0 chr2 9780232 9780465 -240907389 + (TA)n Simple_repeat Simple_repeat 1 233 0 2307 88 0 7 chr2 9780465 9780759 -240907095 - AluSc SINE Alu -17 292 1 380 209 0 0 chr2 9780759 9780826 -240907028 + Tigger2 DNA MER2_type 2651 2717 -1 1098 121 143 27 chr2 9781396 9781620 -240906234 - L1MB3 LINE L1 0 6183 5934 227 97 0 0 chr2 9781950 9781981 -240905873 + L1ME3 LINE L1 6124 6154 -8 1724 131 39 18 chr2 9783305 9783587 -240904267 - AluJo SINE Alu -15 297 10 216 218 0 0 chr2 9784778 9784869 -240902985 + GA-rich Low_complexity Low_complexity 1 91 0 1758 149 21 4 chr2 9784912 9785226 -240902628 + AluJb SINE Alu 1 312 0 22 56 0 0 chr2 9785831 9785867 -240901987 + AT_rich Low_complexity Low_complexity 1 36 0 2394 75 3 7 chr2 9786318 9786626 -240901228 - AluSg SINE Alu -3 307 1 618 255 57 0 chr2 9786678 9786835 -240901019 + HAL1 LINE L1 1 166 -2341 392 290 181 36 chr2 9787028 9787249 -240900605 + HAL1 LINE L1 599 851 -1656 574 249 90 37 chr2 9787371 9787560 -240900294 - HAL1 LINE L1 -761 1746 1548 1007 276 117 8 chr2 9787576 9787897 -240899957 + HAL1 LINE L1 1771 2142 -365 1626 164 31 31 chr2 9787897 9788190 -240899664 + AluJo SINE Alu 1 293 -19 1007 276 117 8 chr2 9788190 9788252 -240899602 + HAL1 LINE L1 2142 2196 -311 230 133 0 22 chr2 9788310 9788355 -240899499 + (GA)n Simple_repeat Simple_repeat 2 45 0 347 280 43 0 chr2 9788355 9788448 -240899406 + HAL1 LINE L1 2334 2430 -77 1567 131 85 4 chr2 9788505 9788764 -240899090 - AluJb SINE Alu -10 302 23 2072 122 0 0 chr2 9788772 9789080 -240898774 - AluSx SINE Alu 0 321 14 24 85 0 0 chr2 9789150 9789209 -240898645 + AT_rich Low_complexity Low_complexity 1 59 0 3589 109 40 32 chr2 9789378 9789901 -240897953 - MER1A DNA MER1_type 0 527 1 191 279 29 15 chr2 9790083 9790151 -240897703 + L2 LINE L2 3245 3313 0 872 163 6 25 chr2 9790162 9790322 -240897532 - FRAM SINE Alu -19 157 1 3143 230 86 32 chr2 9791209 9792214 -240895640 + Tigger6a DNA MER2_type 2 1060 -23 281 324 29 10 chr2 9792978 9793080 -240894774 - MIR3 SINE MIR -54 154 51 324 225 90 9 chr2 9793600 9793711 -240894143 + L1ME4a LINE L1 5735 5854 -267 319 297 74 20 chr2 9793792 9793940 -240893914 + L1ME4a LINE L1 5966 6121 0 2337 92 0 3 chr2 9794246 9794552 -240893302 - AluY SINE Alu -6 305 1 1703 162 18 7 chr2 9794726 9795004 -240892850 + AluJb SINE Alu 7 287 -25 409 196 322 19 chr2 9795153 9795539 -240892315 + LTR50 LTR ERVL 136 736 -59 2169 128 40 15 chr2 9797123 9797452 -240890402 - MER1B DNA MER1_type 0 337 1 752 159 46 26 chr2 9798023 9798174 -240889680 - MER103 DNA DNA -1 165 12 697 295 14 5 chr2 9798198 9798408 -240889446 - MIR SINE MIR -45 217 6 623 213 104 97 chr2 9799320 9799531 -240888323 + MIR SINE MIR 3 216 -46 1774 154 59 0 chr2 9799531 9799817 -240888037 + AluSx SINE Alu 1 303 -9 623 213 104 97 chr2 9799817 9799865 -240887989 + MIR SINE MIR 216 262 0 234 0 0 0 chr2 9800939 9800965 -240886889 + (TTA)n Simple_repeat Simple_repeat 2 27 0 505 200 0 0 chr2 9800965 9801045 -240886809 - FLAM SINE Alu -22 121 42 1220 151 5 15 chr2 9801164 9801370 -240886484 + L1MA8 LINE L1 6083 6286 -5 2242 75 0 42 chr2 9802494 9802801 -240885053 + AluY SINE Alu 1 294 -17 476 210 51 80 chr2 9803003 9803141 -240884713 + L2 LINE L2 3176 3309 -4 537 200 183 8 chr2 9804160 9804280 -240883574 - FLAM_A SINE Alu -1 141 1 1672 149 12 81 chr2 9804690 9804822 -240883032 + AluJo SINE Alu 1 140 -172 2212 107 3 22 chr2 9804822 9805139 -240882715 + AluSx SINE Alu 1 311 -1 1672 149 12 81 chr2 9805139 9805341 -240882513 + AluJo SINE Alu 140 312 0 2014 113 0 4 chr2 9805697 9805971 -240881883 - AluSx SINE Alu -18 294 22 868 162 125 97 chr2 9805997 9806213 -240881641 + AluJo SINE Alu 84 305 -7 210 150 0 0 chr2 9807061 9807101 -240880753 + (TAA)n Simple_repeat Simple_repeat 2 41 0 2221 115 0 0 chr2 9807153 9807448 -240880406 - AluSx SINE Alu -17 295 1 463 155 28 0 chr2 9807510 9807581 -240880273 - AluJ/FRAM SINE Alu -20 292 220 741 261 48 69 chr2 9807592 9807926 -240879928 - MER46C DNA MER2_type -11 327 1 258 260 55 0 chr2 9808758 9808831 -240879023 + HAL1 LINE L1 57 133 -2374 245 248 48 166 chr2 9809017 9809348 -240878506 + HAL1 LINE L1 424 715 -1792 2324 89 30 0 chr2 9809406 9809708 -240878146 - AluSx SINE Alu -1 311 1 2033 154 0 0 chr2 9809738 9810037 -240877817 - AluJb SINE Alu -13 299 1 380 277 236 54 chr2 9810109 9810499 -240877355 - L2 LINE L2 0 3313 2853 1217 223 65 60 chr2 9810523 9810890 -240876964 + L1M4 LINE L1 799 1167 -5375 * 1346 206 122 19 chr2 9810887 9811228 -240876626 + L1MB7 LINE L1 5725 6118 -66 930 140 0 22 chr2 9811228 9811364 -240876490 - FLAM_A SINE Alu 0 133 1 1346 206 122 19 chr2 9811364 9811439 -240876415 + L1MB7 LINE L1 6118 6184 0 339 257 53 82 chr2 9811455 9811661 -240876193 - L1MC4 LINE L1 -404 7638 7439 234 81 0 0 chr2 9812317 9812354 -240875500 + (TATG)n Simple_repeat Simple_repeat 1 37 0 1752 132 17 38 chr2 9812354 9812641 -240875213 - AluJo SINE Alu -31 281 1 1779 172 10 3 chr2 9813979 9814282 -240873572 - AluSx SINE Alu -7 305 1 1862 178 0 0 chr2 9814504 9814802 -240873052 + AluJo SINE Alu 5 302 -10 1027 173 32 5 chr2 9815103 9815288 -240872566 - MER3 DNA MER1_type 0 209 20 254 269 0 0 chr2 9815368 9815435 -240872419 + L1ME4a LINE L1 5753 5819 -1989 220 376 94 0 chr2 9816314 9816463 -240871391 + L2 LINE L2 2681 2843 -471 190 337 157 56 chr2 9816565 9816871 -240870983 + L2 LINE L2 2933 3269 -3 817 150 1 45 chr2 9816975 9817150 -240870704 + L1MC1 LINE L1 5398 5558 -615 * 829 206 36 10 chr2 9817149 9817343 -240870511 - HAL1 LINE L1 -651 1856 1658 1128 31 0 0 chr2 9817362 9817490 -240870364 - SVA Other Other 0 1386 1259 400 138 0 0 chr2 9817491 9817549 -240870305 + Alu SINE Alu 236 293 -19 235 298 85 59 chr2 9817555 9817860 -240869994 + HAL1 LINE L1 1860 2172 -335 4316 173 32 5 chr2 9817863 9818621 -240869233 + L1MC1 LINE L1 5544 6321 -12 1829 153 10 32 chr2 9819080 9819394 -240868460 + AluJo SINE Alu 1 307 -5 398 277 10 10 chr2 9819444 9819545 -240868309 - L2 LINE L2 -25 3288 3188 2261 75 0 7 chr2 9820597 9820917 -240866937 + AluY SINE Alu 16 311 0 907 136 40 40 chr2 9820929 9821105 -240866749 + L1PA16 LINE L1 5991 6166 0 21 0 0 0 chr2 9821105 9821126 -240866728 + AT_rich Low_complexity Low_complexity 1 21 0 856 201 69 0 chr2 9821981 9822170 -240865684 - MER105 DNA DNA 0 204 3 22 0 0 0 chr2 9822555 9822577 -240865277 + AT_rich Low_complexity Low_complexity 1 22 0 280 261 134 8 chr2 9822656 9822790 -240865064 + L1ME4a LINE L1 5969 6119 -2 992 202 5 11 chr2 9823089 9823277 -240864577 - AluJo SINE Alu -125 187 1 409 322 35 14 chr2 9823406 9823549 -240864305 - MIR SINE MIR -111 151 6 459 289 72 0 chr2 9823550 9823619 -240864235 + MIR3 SINE MIR 34 97 -111 2328 98 0 10 chr2 9823619 9823926 -240863928 + AluY SINE Alu 1 304 -7 459 289 72 0 chr2 9823926 9824008 -240863846 + MIR3 SINE MIR 97 196 -12 2088 80 8 0 chr2 9824906 9825169 -240862685 - AluSp SINE Alu -15 298 34 473 261 33 20 chr2 9825333 9825486 -240862368 - L2 LINE L2 0 3313 3159 881 176 14 0 chr2 9825491 9825639 -240862215 - MER58A DNA MER1_type -36 188 39 820 189 47 115 chr2 9825660 9825998 -240861856 + LTR37A LTR ERV1 40 354 -72 37 0 0 0 chr2 9826001 9826038 -240861816 + AT_rich Low_complexity Low_complexity 1 37 0 801 160 0 8 chr2 9826038 9826157 -240861697 - FLAM_C SINE Alu -15 118 1 318 244 0 0 chr2 9826157 9826239 -240861615 + LTR37A LTR ERV1 345 426 0 570 192 106 0 chr2 9826432 9826536 -240861318 - FLAM_A SINE Alu -20 122 8 32 86 0 0 chr2 9826578 9826659 -240861195 + AT_rich Low_complexity Low_complexity 1 81 0 344 250 0 0 chr2 9826902 9826966 -240860888 - L2 LINE L2 -548 2766 2703 204 40 0 0 chr2 9826978 9827003 -240860851 + (TG)n Simple_repeat Simple_repeat 2 26 0 27 39 0 19 chr2 9827003 9827027 -240860827 + AT_rich Low_complexity Low_complexity 1 24 -27 1879 159 0 10 chr2 9827027 9827316 -240860538 - AluJo SINE Alu -26 286 1 27 39 0 19 chr2 9827316 9827343 -240860511 + AT_rich Low_complexity Low_complexity 24 51 0 1348 268 101 87 chr2 9827344 9828088 -240859766 - L2 LINE L2 -619 2695 1942 1647 152 77 46 chr2 9828158 9828507 -240859347 - MER46B DNA MER2_type 0 236 2 222 283 9 142 chr2 9828854 9828960 -240858894 + L2 LINE L2 3144 3235 -37 1793 147 24 10 chr2 9829083 9829376 -240858478 - AluSx SINE Alu -15 297 1 1666 144 0 118 chr2 9829476 9829815 -240858039 + AluJo SINE Alu 1 299 -3 1931 153 44 0 chr2 9830108 9830402 -240857452 + AluSx SINE Alu 1 307 -5 1740 164 3 14 chr2 9831188 9831474 -240856380 + AluJo SINE Alu 1 283 -29 495 87 0 0 chr2 9831482 9831551 -240856303 + (CGTAA)n Simple_repeat Simple_repeat 3 71 0 2302 100 0 10 chr2 9831672 9831981 -240855873 - AluSg SINE Alu -4 306 1 2269 126 0 0 chr2 9831981 9832291 -240855563 - AluSx SINE Alu -2 310 1 2281 79 0 0 chr2 9832329 9832609 -240855245 + AluY SINE Alu 1 280 -31 207 0 0 0 chr2 9833029 9833052 -240854802 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 987 89 8 0 chr2 9834104 9834227 -240853627 + AluSq/x SINE Alu 14 137 -175 2119 87 15 84 chr2 9834227 9834559 -240853295 + AluSq SINE Alu 1 309 -4 245 324 65 0 chr2 9834802 9834910 -240852944 + L2 LINE L2 2383 2497 -817 234 330 175 19 chr2 9835547 9835753 -240852101 + L2 LINE L2 2593 2830 -484 1911 142 13 7 chr2 9837156 9837458 -240850396 + AluSx SINE Alu 1 304 -8 314 299 110 13 chr2 9838261 9838415 -240849439 - MIR SINE MIR -47 215 47 2331 74 14 3 chr2 9838721 9839017 -240848837 - AluY SINE Alu -12 299 1 339 25 0 0 chr2 9839117 9839157 -240848697 + (CA)n Simple_repeat Simple_repeat 2 41 0 603 171 314 44 chr2 9840518 9840770 -240847084 + MER5C DNA MER1_type 5 324 0 219 280 0 54 chr2 9841145 9841238 -240846616 - MER5B DNA MER1_type -76 102 15 180 292 21 62 chr2 9841152 9841248 -240846606 + MER5A DNA MER1_type 94 185 -4 * 487 261 32 37 chr2 9841949 9842137 -240845717 + L1MC4 LINE L1 7492 7678 -364 263 345 12 30 chr2 9842332 9842500 -240845354 + L1MC4 LINE L1 7860 8024 -18 2389 97 3 0 chr2 9842500 9842808 -240845046 - AluSx SINE Alu -3 309 1 1491 201 18 41 chr2 9842874 9843217 -240844637 - MER58B DNA MER1_type 0 341 7 1466 169 27 37 chr2 9843358 9843654 -240844200 - AluJo SINE Alu -19 293 1 924 182 25 0 chr2 9843801 9843960 -240843894 + FRAM SINE Alu 1 162 -14 1203 170 166 0 chr2 9844538 9844815 -240843039 - MER33 DNA MER1_type 0 324 2 2513 68 0 0 chr2 9845148 9845456 -240842398 + AluSg SINE Alu 1 308 -2 279 320 0 40 chr2 9845461 9845561 -240842293 + MIR SINE MIR 20 115 -147 204 158 0 0 chr2 9845575 9845613 -240842241 + A-rich Low_complexity Low_complexity 1 38 0 2194 118 3 0 chr2 9846102 9846399 -240841455 + AluSx SINE Alu 1 298 -14 190 394 20 10 chr2 9846400 9846499 -240841355 - MER5A DNA MER1_type -54 135 36 283 192 39 0 chr2 9847918 9847970 -240839884 - MIR SINE MIR -63 145 92 1950 140 13 3 chr2 9848116 9848423 -240839431 + AluSx SINE Alu 1 310 -2 342 88 99 11 chr2 9848423 9848514 -240839340 + GA-rich Low_complexity Low_complexity 2 100 0 2057 117 14 0 chr2 9850225 9850515 -240837339 + AluSx SINE Alu 1 294 -18 251 185 56 0 chr2 9851351 9851405 -240836449 - L2 LINE L2 -1 3312 3256 * 323 304 20 10 chr2 9851402 9851504 -240836350 - L2 LINE L2 -3172 142 40 277 289 109 45 chr2 9851772 9851928 -240835926 + MER103 DNA DNA 1 166 0 1047 148 0 6 chr2 9851984 9852146 -240835708 + AluJo SINE Alu 1 161 -151 1601 162 3 56 chr2 9852583 9852886 -240834968 + AluJb SINE Alu 1 287 -25 2033 123 3 7 chr2 9853514 9853806 -240834048 - AluSx SINE Alu -21 291 1 202 270 0 0 chr2 9854099 9854173 -240833681 + A-rich Low_complexity Low_complexity 1 74 0 2297 106 3 0 chr2 9854262 9854563 -240833291 - AluSp SINE Alu -11 302 1 2175 116 3 0 chr2 9854565 9854859 -240832995 - AluSx SINE Alu -17 295 1 28 0 0 0 chr2 9855053 9855081 -240832773 + AT_rich Low_complexity Low_complexity 1 28 0 522 220 61 8 chr2 9855327 9855459 -240832395 + MIR SINE MIR 124 262 0 430 245 19 0 chr2 9855601 9855707 -240832147 + L1ME4a LINE L1 5562 5669 -452 2205 118 3 3 chr2 9856273 9856570 -240831284 + AluSx SINE Alu 1 297 -15 404 247 0 0 chr2 9856631 9856724 -240831130 + L1MC4 LINE L1 7805 7897 -145 2442 56 3 7 chr2 9856857 9857161 -240830693 + AluY SINE Alu 1 303 -8 1018 130 18 18 chr2 9857161 9857330 -240830524 + AluSg/x SINE Alu 132 300 -10 1927 92 78 0 chr2 9857337 9857608 -240830246 + AluSq SINE Alu 1 292 -21 1422 184 25 0 chr2 9857745 9858023 -240829831 - AluJo SINE Alu -27 285 1 185 267 0 67 chr2 9858706 9858781 -240829073 + L2 LINE L2 825 894 -2420 2363 137 9 0 chr2 9859078 9859428 -240828426 - L1PA16 LINE L1 -10 6156 5804 250 147 120 13 chr2 9859461 9859536 -240828318 + L1ME4a LINE L1 5732 5814 -1994 1939 104 85 0 chr2 9859542 9859812 -240828042 - AluSx SINE Alu -19 293 1 438 246 77 8 chr2 9860861 9860991 -240826863 + MIR SINE MIR 112 250 -12 23 0 0 0 chr2 9861015 9861038 -240826816 + AT_rich Low_complexity Low_complexity 1 23 0 618 250 85 0 chr2 9861175 9861339 -240826515 + MIR SINE MIR 57 234 -28 30 0 0 0 chr2 9861966 9861996 -240825858 + AT_rich Low_complexity Low_complexity 1 30 0 442 192 178 14 chr2 9862174 9862268 -240825586 + L1ME4a LINE L1 5930 6007 -114 1367 171 65 52 chr2 9862268 9862577 -240825277 - AluSq SINE Alu 0 313 1 442 192 178 14 chr2 9862577 9862628 -240825226 + L1ME4a LINE L1 6007 6099 -22 188 100 25 0 chr2 9862630 9862670 -240825184 + (TA)n Simple_repeat Simple_repeat 2 42 0 468 77 0 0 chr2 9862670 9862735 -240825119 + (CA)n Simple_repeat Simple_repeat 2 66 0 2263 85 0 4 chr2 9862799 9863118 -240824736 + AluSc SINE Alu 1 318 0 831 176 0 0 chr2 9863119 9863244 -240824610 + FLAM_C SINE Alu 1 125 -8 220 51 26 26 chr2 9863624 9863641 -240824213 + (CAAAA)n Simple_repeat Simple_repeat 2 18 -22 2259 118 0 6 chr2 9863641 9863955 -240823899 + AluSx SINE Alu 1 312 0 220 51 26 26 chr2 9863955 9863976 -240823878 + (CAAAA)n Simple_repeat Simple_repeat 17 40 0 201 74 0 0 chr2 9864588 9864615 -240823239 + (T)n Simple_repeat Simple_repeat 1 27 0 2306 106 3 3 chr2 9865234 9865546 -240822308 + AluSp SINE Alu 1 312 -1 1919 164 0 3 chr2 9865899 9866192 -240821662 + AluSx SINE Alu 1 292 -20 1120 165 0 35 chr2 9867238 9867438 -240820416 + AluJb SINE Alu 120 312 0 1126 180 77 77 chr2 9867578 9867746 -240820108 + MLT1E2 LTR MaLR 10 176 -450 2185 109 3 0 chr2 9867746 9868052 -240819802 + AluSg SINE Alu 1 307 0 1126 180 77 77 chr2 9868052 9868110 -240819744 + MLT1E2 LTR MaLR 176 232 -394 1768 181 19 10 chr2 9868110 9868419 -240819435 + AluJo SINE Alu 1 312 0 1126 180 77 77 chr2 9868419 9868619 -240819235 + MLT1E2 LTR MaLR 232 436 -190 562 224 131 27 chr2 9868715 9868898 -240818956 + MLT1E2 LTR MaLR 422 623 -3 525 283 107 29 chr2 9869277 9869736 -240818118 + L1MC4a LINE L1 5394 5817 -304 2366 112 0 0 chr2 9869821 9870126 -240817728 - AluSx SINE Alu -7 305 1 2170 130 0 0 chr2 9870128 9870427 -240817427 - AluSx SINE Alu -13 299 1 2041 145 0 19 chr2 9870643 9870961 -240816893 - AluJb SINE Alu 0 312 1 279 0 0 0 chr2 9871028 9871059 -240816795 + (TG)n Simple_repeat Simple_repeat 2 32 0 198 323 96 55 chr2 9872297 9872517 -240815337 + MIR SINE MIR 22 250 -12 970 195 59 0 chr2 9872521 9872742 -240815112 + MSTB LTR MaLR 1 234 -192 467 144 103 10 chr2 9872962 9873059 -240814795 - MER5A DNA MER1_type -83 106 1 363 272 57 7 chr2 9873434 9873595 -240814259 + MIR SINE MIR 14 184 -62 293 296 82 41 chr2 9874774 9874970 -240812884 + L2 LINE L2 2997 3200 -72 261 98 0 0 chr2 9874998 9875039 -240812815 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 579 246 24 12 chr2 9875110 9875277 -240812577 - MER20 DNA MER1_type -15 204 36 27 29 0 0 chr2 9875663 9875697 -240812157 + AT_rich Low_complexity Low_complexity 1 34 0 379 238 0 10 chr2 9875725 9875826 -240812028 - FLAM_C SINE Alu -7 126 27 1933 108 17 21 chr2 9876001 9876289 -240811565 - AluSg SINE Alu -23 287 1 1071 84 7 14 chr2 9876289 9876431 -240811423 - AluSq/x SINE Alu -172 141 1 652 139 18 96 chr2 9876434 9876561 -240811293 + L1MB3 LINE L1 6029 6164 -19 359 21 21 0 chr2 9876561 9876609 -240811245 + (TG)n Simple_repeat Simple_repeat 2 50 0 2213 101 10 7 chr2 9876613 9876910 -240810944 - AluSx SINE Alu -14 298 1 652 139 18 96 chr2 9876910 9876943 -240810911 + L1MB3 LINE L1 6167 6181 -2 612 237 40 48 chr2 9877042 9877291 -240810563 - MLT1H1 LTR MaLR 0 555 309 395 310 96 13 chr2 9877320 9877550 -240810304 - MLT1H1 LTR MaLR -319 276 33 1721 126 13 32 chr2 9877582 9877891 -240809963 - AluY SINE Alu -8 303 1 625 149 17 74 chr2 9878310 9878485 -240809369 + AluJb SINE Alu 131 295 -17 368 209 6 122 chr2 9878532 9878704 -240809150 + Charlie7 DNA MER1_type 317 468 -2144 1859 250 67 46 chr2 9878721 9879437 -240808417 + MER21B LTR ERV1 22 752 -111 329 289 30 68 chr2 9879474 9879737 -240808117 + Charlie7 DNA MER1_type 527 779 -1833 237 118 29 73 chr2 9880359 9880427 -240807427 - FLAM SINE Alu -25 108 44 238 254 63 0 chr2 9880937 9881000 -240806854 - MIR3 SINE MIR -30 178 112 2004 127 28 3 chr2 9881289 9881580 -240806274 + AluSx SINE Alu 1 298 -14 2449 80 3 10 chr2 9881585 9881896 -240805958 + AluSq SINE Alu 5 313 0 1869 120 6 70 chr2 9882443 9882759 -240805095 - AluJb SINE Alu -16 296 1 2469 50 6 44 chr2 9883048 9883368 -240804486 + AluY SINE Alu 1 308 -3 2176 112 7 0 chr2 9883379 9883673 -240804181 + AluY SINE Alu 1 296 -15 1470 254 81 5 chr2 9883728 9884149 -240803705 + MLT1J LTR MaLR 1 453 -58 225 239 28 113 chr2 9884225 9884367 -240803487 - MIR SINE MIR -11 251 122 358 252 47 19 chr2 9885018 9885125 -240802729 + L3 LINE CR1 1377 1486 -91 628 241 171 0 chr2 9885968 9886155 -240801699 + MIR SINE MIR 44 262 0 340 243 72 36 chr2 9889163 9889274 -240798580 + MIR SINE MIR 65 179 -83 2096 112 14 0 chr2 9889500 9889795 -240798059 + AluSg SINE Alu 1 299 -11 2337 98 0 7 chr2 9890417 9890723 -240797131 + AluSq SINE Alu 1 304 -9 839 169 0 8 chr2 9891134 9891264 -240796590 + FLAM_C SINE Alu 1 129 -14 262 67 44 0 chr2 9891370 9891415 -240796439 + GA-rich Low_complexity Low_complexity 1 47 0 470 149 44 70 chr2 9891417 9891450 -240796404 + MER3 DNA MER1_type 98 130 -79 1123 175 171 52 chr2 9891450 9891585 -240796269 - AluJo SINE Alu 0 302 184 2391 100 3 0 chr2 9891585 9891885 -240795969 - AluSp SINE Alu -12 301 1 1123 175 171 52 chr2 9891885 9892018 -240795836 - AluJo SINE Alu -118 184 2 470 149 44 70 chr2 9892018 9892098 -240795756 + MER3 DNA MER1_type 130 208 -1 244 229 0 0 chr2 9892058 9892106 -240795748 - MER3 DNA MER1_type -121 88 41 * 1818 165 7 11 chr2 9892618 9892903 -240794951 + AluJo SINE Alu 8 291 -21 180 0 0 0 chr2 9892981 9893001 -240794853 + (TG)n Simple_repeat Simple_repeat 1 20 0 582 290 67 40 chr2 9893519 9893743 -240794111 + MIR SINE MIR 13 242 -20 250 203 195 0 chr2 9894030 9894148 -240793706 + L1ME LINE L1 5711 5851 -270 337 239 159 11 chr2 9894154 9894242 -240793612 + AluSg SINE Alu 24 124 -176 2293 104 0 0 chr2 9894276 9894574 -240793280 - AluSx SINE Alu -14 298 1 1275 148 0 5 chr2 9894719 9894915 -240792939 - AluJb SINE Alu -1 311 117 284 127 0 0 chr2 9894927 9894982 -240792872 - Alu SINE Alu -1 300 246 1789 123 0 4 chr2 9894989 9895241 -240792613 + AluSx SINE Alu 62 312 0 768 193 7 7 chr2 9895992 9896137 -240791717 + MER45A DNA AcHobo 34 178 0 375 375 106 27 chr2 9896230 9896606 -240791248 - L2 LINE L2 -458 2856 2451 1401 242 35 33 chr2 9896717 9896897 -240790957 + L1M4 LINE L1 4521 4699 -1447 2390 93 0 3 chr2 9896897 9897208 -240790646 + AluSx SINE Alu 1 310 -2 1401 242 35 33 chr2 9897208 9897510 -240790344 + L1M4 LINE L1 4699 5004 -1142 1226 153 5 63 chr2 9897510 9897732 -240790122 + AluSx SINE Alu 1 209 -103 2090 119 10 26 chr2 9897832 9898143 -240789711 + AluSq SINE Alu 1 306 -7 1630 184 7 7 chr2 9898153 9898431 -240789423 + AluJo SINE Alu 23 300 -12 993 250 12 19 chr2 9898439 9898537 -240789317 + L1MC4a LINE L1 6513 6610 -1198 186 43 0 0 chr2 9898537 9898560 -240789294 + (GA)n Simple_repeat Simple_repeat 2 24 0 993 250 12 19 chr2 9898560 9898717 -240789137 + L1MC4a LINE L1 6610 6766 -1042 318 145 0 105 chr2 9898886 9898944 -240788910 + L1MC4 LINE L1 7975 8025 -17 2142 151 0 3 chr2 9898944 9899256 -240788598 + AluJb SINE Alu 1 311 -1 318 145 0 105 chr2 9899256 9899273 -240788581 + L1MC4 LINE L1 8025 8042 0 600 254 159 6 chr2 9899391 9899718 -240788136 + L2 LINE L2 143 519 -2795 624 206 84 0 chr2 9899760 9899918 -240787936 + MER3 DNA MER1_type 1 123 -86 1861 167 17 3 chr2 9899935 9900234 -240787620 - AluJb SINE Alu -9 303 1 938 178 0 30 chr2 9900245 9900414 -240787440 - AluJb SINE Alu -25 287 124 1525 184 3 63 chr2 9900577 9900911 -240786943 - AluJo SINE Alu 0 312 1 235 30 0 0 chr2 9900913 9900946 -240786908 - L1PA12 LINE L1 -2 6166 6134 829 152 0 15 chr2 9900946 9901078 -240786776 + FLAM_C SINE Alu 1 130 -3 186 259 56 19 chr2 9901095 9901149 -240786705 - L3 LINE CR1 -1194 383 328 2020 146 13 0 chr2 9901311 9901612 -240786242 - AluJb SINE Alu -7 305 1 1917 155 14 0 chr2 9902055 9902346 -240785508 + AluJb SINE Alu 1 295 -17 2417 84 3 3 chr2 9902351 9902650 -240785204 + AluSp SINE Alu 1 299 -14 2138 143 0 0 chr2 9902888 9903181 -240784673 + AluSx SINE Alu 1 293 -19 1753 161 7 4 chr2 9903450 9903730 -240784124 - AluJb SINE Alu -31 281 1 368 289 48 54 chr2 9903730 9903896 -240783958 + L1ME4a LINE L1 5912 6076 -45 1565 124 5 0 chr2 9903897 9904107 -240783747 + AluSx SINE Alu 58 268 -44 2491 78 7 0 chr2 9904218 9904524 -240783330 + AluSc SINE Alu 1 308 -1 181 243 216 27 chr2 9905960 9906034 -240781820 + L2 LINE L2 3185 3272 0 296 316 74 26 chr2 9906041 9906231 -240781623 - MIR3 SINE MIR -7 201 3 1235 179 0 5 chr2 9906415 9906627 -240781227 + AluJb SINE Alu 87 297 -15 418 154 39 62 chr2 9906630 9906707 -240781147 + Charlie5 DNA MER1_type 2494 2568 -56 2132 119 0 10 chr2 9906707 9907000 -240780854 - AluSx SINE Alu -22 290 1 418 154 39 62 chr2 9907000 9907052 -240780802 + Charlie5 DNA MER1_type 2568 2620 -4 1668 139 56 40 chr2 9907113 9907416 -240780438 - AluJo SINE Alu -4 308 1 207 228 254 18 chr2 9907418 9907532 -240780322 + MER5A DNA MER1_type 47 187 -2 * 511 208 10 0 chr2 9907440 9907536 -240780318 - MER5A DNA MER1_type -80 109 13 963 213 11 0 chr2 9907566 9907749 -240780105 - MER5A DNA MER1_type -4 185 1 753 272 117 29 chr2 9908011 9908353 -240779501 - L1M4 LINE L1 -2882 3264 2893 1328 171 0 9 chr2 9908356 9908567 -240779287 - AluJo SINE Alu -94 218 10 208 130 0 65 chr2 9908597 9908643 -240779211 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 582 100 12 0 chr2 9908661 9908741 -240779113 + AluJ/FLAM SINE Alu 2 82 -230 1057 138 66 0 chr2 9908848 9909029 -240778825 + AluY SINE Alu 119 311 0 356 333 53 15 chr2 9909043 9909175 -240778679 - L1M4 LINE L1 -3372 2774 2638 2039 130 10 13 chr2 9909270 9909571 -240778283 - AluSx SINE Alu -12 300 1 186 354 80 18 chr2 9909705 9909818 -240778036 - MIR SINE MIR -71 137 18 496 268 89 94 chr2 9910262 9910636 -240777218 + L2 LINE L2 2312 2684 -630 1867 74 0 4 chr2 9910636 9910889 -240776965 + AluSp SINE Alu 57 308 0 496 268 89 94 chr2 9910889 9911140 -240776714 + L2 LINE L2 2684 2935 -379 2136 105 48 7 chr2 9911398 9911693 -240776161 + AluSx SINE Alu 1 307 -5 278 273 11 11 chr2 9911698 9911786 -240776068 - L1ME LINE L1 -476 5645 5558 267 242 11 21 chr2 9911856 9911951 -240775903 - L1ME LINE L1 -2379 5429 5336 2336 97 0 3 chr2 9912267 9912567 -240775287 - AluSx SINE Alu -13 299 1 200 189 38 19 chr2 9913264 9913317 -240774537 + MIR SINE MIR 85 138 -124 447 68 0 0 chr2 9913453 9913512 -240774342 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 2037 118 4 0 chr2 9913512 9913784 -240774070 - AluSx SINE Alu -33 279 7 727 175 241 0 chr2 9914703 9914836 -240773018 - AluJo SINE Alu -18 294 194 195 69 0 0 chr2 9914836 9914865 -240772989 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 727 175 241 0 chr2 9914865 9914897 -240772957 - AluJo SINE Alu -118 194 89 1970 121 0 48 chr2 9915066 9915380 -240772474 + AluSg SINE Alu 1 299 -11 2253 113 17 0 chr2 9915383 9915683 -240772171 + AluSp SINE Alu 1 305 -8 1159 124 12 0 chr2 9915687 9915856 -240771998 + FRAM SINE Alu 1 170 -6 1200 204 98 14 chr2 9915857 9916284 -240771570 + L1ME3A LINE L1 5200 5667 -503 2380 110 0 0 chr2 9916287 9916595 -240771259 + AluSg SINE Alu 1 308 -2 816 164 8 8 chr2 9916635 9916763 -240771091 + FAM SINE Alu 6 133 -52 28 0 0 0 chr2 9916767 9916795 -240771059 + AT_rich Low_complexity Low_complexity 1 28 0 2203 126 7 3 chr2 9916806 9917116 -240770738 + AluSp SINE Alu 3 313 0 685 245 137 90 chr2 9917118 9917587 -240770267 + L1ME3A LINE L1 5652 6142 -28 2270 115 0 0 chr2 9917620 9917915 -240769939 - AluSq SINE Alu -18 295 1 1512 155 73 43 chr2 9917915 9918233 -240769621 - L1MC1 LINE L1 -8 6325 5995 2065 97 0 0 chr2 9918253 9918532 -240769322 - AluSx SINE Alu 0 301 23 219 319 43 77 chr2 9919108 9919230 -240768624 + L2 LINE L2 2891 3016 -297 2302 122 0 0 chr2 9919230 9919534 -240768320 + AluSq SINE Alu 1 304 -9 219 319 43 77 chr2 9919534 9919616 -240768238 + L2 LINE L2 3016 3099 -214 641 165 55 16 chr2 9919616 9919743 -240768111 - FLAM_C SINE Alu -1 132 1 219 319 43 77 chr2 9919743 9919913 -240767941 + L2 LINE L2 3099 3253 -60 1245 176 173 4 chr2 9920310 9920565 -240767289 + AluSx SINE Alu 1 298 -14 185 94 31 0 chr2 9921027 9921059 -240766795 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2349 96 3 10 chr2 9922050 9922364 -240765490 + AluSx SINE Alu 1 312 0 2087 104 8 0 chr2 9922724 9922992 -240764862 + AluSx SINE Alu 22 291 -21 988 102 0 0 chr2 9923008 9923163 -240764691 + AluSg/x SINE Alu 157 311 0 379 257 95 0 chr2 9923244 9923349 -240764505 + MIR SINE MIR 32 146 -62 259 366 0 0 chr2 9923881 9923974 -240763880 - MIR SINE MIR -73 189 97 395 300 147 21 chr2 9925001 9925191 -240762663 + L1ME4a LINE L1 5880 6093 -28 2113 150 0 10 chr2 9925461 9925639 -240762215 - AluSx SINE Alu -1 311 136 2614 43 0 3 chr2 9925639 9925938 -240761916 - AluY SINE Alu -13 298 1 2113 150 0 10 chr2 9925938 9926073 -240761781 - AluSx SINE Alu -176 136 1 240 59 0 0 chr2 9926151 9926185 -240761669 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 2276 95 14 0 chr2 9926186 9926482 -240761372 - AluSp SINE Alu -12 301 2 367 285 39 31 chr2 9926683 9926813 -240761041 + MIR3 SINE MIR 15 145 -63 28 79 0 0 chr2 9928196 9928259 -240759595 + GC_rich Low_complexity Low_complexity 1 63 0 2548 59 3 3 chr2 9930089 9930392 -240757462 + AluY SINE Alu 1 303 -8 1497 77 0 0 chr2 9930413 9930594 -240757260 - AluSx SINE Alu -131 181 1 700 139 0 9 chr2 9931157 9931265 -240756589 + AluSq/x SINE Alu 27 133 -179 2194 103 7 3 chr2 9931269 9931569 -240756285 + AluSp SINE Alu 1 301 -12 568 204 10 0 chr2 9932403 9932506 -240755348 + FLAM_A SINE Alu 2 105 -37 309 109 0 0 chr2 9932506 9932552 -240755302 + (TCCC)n Simple_repeat Simple_repeat 1 46 0 2067 135 0 3 chr2 9932552 9932841 -240755013 - AluSx SINE Alu -24 288 1 1114 196 0 20 chr2 9932844 9933043 -240754811 + AluJo SINE Alu 105 299 -13 1619 117 0 22 chr2 9933087 9933317 -240754537 + AluSq SINE Alu 1 225 -88 494 189 42 0 chr2 9933417 9933512 -240754342 + AluSg/x SINE Alu 209 307 -3 476 61 122 0 chr2 9933517 9933615 -240754239 + GA-rich Low_complexity Low_complexity 4 113 0 243 279 177 0 chr2 9933696 9933775 -240754079 + MIR SINE MIR 58 150 -112 2069 229 49 20 chr2 9934197 9934805 -240753049 + L1ME2 LINE L1 5519 6144 -20 262 268 17 82 chr2 9934863 9935094 -240752760 + L1MC4 LINE L1 7826 8041 -1 2055 143 3 3 chr2 9935610 9935910 -240751944 - AluJb SINE Alu -12 300 1 2179 118 7 0 chr2 9936006 9936293 -240751561 - AluSg SINE Alu -21 289 1 1598 225 80 19 chr2 9936717 9937144 -240750710 + LTR40c LTR ERVL 1 453 -12 2381 75 20 10 chr2 9937207 9937502 -240750352 + AluSp SINE Alu 1 298 -15 792 189 0 0 chr2 9937510 9937642 -240750212 + FLAM_C SINE Alu 2 133 0 713 247 11 29 chr2 9938037 9938211 -240749643 - FRAM SINE Alu -7 169 1 1701 93 97 69 chr2 9938449 9938738 -240749116 + AluSg SINE Alu 1 297 -13 2178 253 127 45 chr2 9938909 9939002 -240748852 - L2 LINE L2 -4 3309 3225 1539 168 54 27 chr2 9939002 9939300 -240748554 + AluJb SINE Alu 1 306 -6 2178 253 127 45 chr2 9939300 9940269 -240747585 - L2 LINE L2 -88 3225 2164 287 315 130 0 chr2 9940276 9940384 -240747470 + L3 LINE CR1 989 1110 -467 1410 296 124 42 chr2 9940420 9940887 -240746967 + L2 LINE L2 1835 2262 -1051 1788 93 42 0 chr2 9940887 9941124 -240746730 + AluSc SINE Alu 1 247 -62 1410 296 124 42 chr2 9941124 9942012 -240745842 + L2 LINE L2 2262 3312 -1 496 299 132 37 chr2 9941999 9942324 -240745530 + L3 LINE CR1 1133 1488 -89 * 185 274 0 39 chr2 9942344 9942395 -240745459 + MIR SINE MIR 78 126 -82 255 339 156 0 chr2 9942527 9942636 -240745218 + L2 LINE L2 3177 3302 -11 2533 65 0 7 chr2 9943342 9943651 -240744203 + AluSx SINE Alu 1 307 -5 2502 81 0 0 chr2 9943864 9944171 -240743683 + AluSx SINE Alu 1 307 -5 181 255 20 20 chr2 9944540 9944591 -240743263 + L2 LINE L2 3248 3298 -15 1673 187 26 10 chr2 9944752 9945057 -240742797 + 7SLRNA srpRNA srpRNA 5 314 -6 945 226 88 9 chr2 9945057 9945274 -240742580 + MIR SINE MIR 22 255 -7 908 136 97 24 chr2 9945343 9945549 -240742305 - L1MB8 LINE L1 -1 6177 5957 825 205 58 0 chr2 9945578 9945734 -240742120 - AluJo SINE Alu -39 273 109 930 157 0 7 chr2 9945736 9945883 -240741971 - MER46A DNA MER2_type -90 146 1 384 115 4 4 chr2 9945885 9945941 -240741913 - MLT1A1 LTR MaLR -216 158 99 2377 97 0 3 chr2 9945941 9946251 -240741603 + AluSg SINE Alu 1 309 -1 2233 125 0 0 chr2 9946259 9946556 -240741298 + AluSq SINE Alu 1 297 -16 2135 105 0 74 chr2 9946556 9946880 -240740974 + AluSc SINE Alu 1 300 -9 300 259 56 37 chr2 9946975 9947083 -240740771 + MIR SINE MIR 151 260 -2 1516 168 7 45 chr2 9947376 9947504 -240740350 + AluJo SINE Alu 13 144 -168 2228 102 13 7 chr2 9947504 9947834 -240740020 + AluSq SINE Alu 1 332 0 1516 168 7 45 chr2 9947834 9947995 -240739859 + AluJo SINE Alu 144 293 -19 327 103 17 35 chr2 9947995 9948053 -240739801 + U7 snRNA snRNA 7 63 0 235 307 11 23 chr2 9948064 9948152 -240739702 - L1ME LINE L1 -527 5594 5508 2529 77 0 6 chr2 9948461 9948772 -240739082 - AluSc SINE Alu 0 309 1 2199 108 30 7 chr2 9948836 9949141 -240738713 - AluSq SINE Alu -1 312 1 1980 180 33 19 chr2 9949147 9949162 -240738692 - L1MB3 LINE L1 -37 6146 6133 2057 110 50 0 chr2 9949162 9949444 -240738410 - AluSx SINE Alu -16 296 1 1980 180 33 19 chr2 9949444 9949851 -240738003 - L1MB3 LINE L1 -50 6133 5718 1722 121 0 0 chr2 9949879 9950103 -240737751 - AluSx SINE Alu -88 224 1 2090 139 3 3 chr2 9950130 9950513 -240737341 - AluSc SINE Alu 0 383 1 1596 241 53 80 chr2 9950731 9950790 -240737064 - L1MC4 LINE L1 -2 8040 7981 2339 113 3 0 chr2 9950790 9951100 -240736754 + AluSp SINE Alu 1 311 -2 1596 241 53 80 chr2 9951100 9951382 -240736472 - L1MC4 LINE L1 -61 7981 7693 771 187 0 22 chr2 9951382 9951516 -240736338 + FLAM_A SINE Alu 1 131 -2 1596 241 53 80 chr2 9951516 9951653 -240736201 - L1MC4 LINE L1 -349 7693 7554 1859 124 3 107 chr2 9951653 9951999 -240735855 - AluY SINE Alu -1 310 1 1596 241 53 80 chr2 9951999 9952232 -240735622 - L1MC4 LINE L1 -488 7554 7346 392 159 62 53 chr2 9952242 9952355 -240735499 - L1ME2 LINE L1 0 6164 6051 191 347 92 10 chr2 9952514 9952612 -240735242 + MIR SINE MIR 45 150 -58 2303 111 3 3 chr2 9952651 9952957 -240734897 + AluSq SINE Alu 1 306 -7 25 51 0 0 chr2 9952975 9953014 -240734840 + AT_rich Low_complexity Low_complexity 1 39 0 880 156 0 0 chr2 9953016 9953144 -240734710 + FLAM_C SINE Alu 1 128 -5 816 248 64 67 chr2 9953164 9953507 -240734347 + L1ME4a LINE L1 5311 5652 -469 396 316 158 34 chr2 9953576 9953842 -240734012 + L1ME4a LINE L1 5634 5906 -215 2104 141 3 0 chr2 9954044 9954349 -240733505 + AluJb SINE Alu 7 312 0 345 218 64 0 chr2 9954462 9954540 -240733314 - L2 LINE L2 0 3272 3190 304 253 181 0 chr2 9954630 9954713 -240733141 + L2 LINE L2 3189 3286 -27 189 245 0 57 chr2 9954761 9954814 -240733040 + L2 LINE L2 3263 3312 -1 236 240 125 60 chr2 9954829 9955029 -240732825 - LTR33 LTR ERVL -6 515 303 220 161 57 218 chr2 9955183 9955307 -240732547 - MIR SINE MIR -86 176 73 405 248 110 9 chr2 9955460 9955569 -240732285 + MIR SINE MIR 93 212 -50 898 143 0 0 chr2 9955629 9955755 -240732099 + AluJ SINE Alu 1 126 -176 684 183 8 38 chr2 9955763 9955894 -240731960 + AluJ SINE Alu 183 309 -3 275 293 63 103 chr2 9956421 9956517 -240731337 - MIR SINE MIR -75 187 100 2374 115 0 0 chr2 9956517 9956829 -240731025 + AluSx SINE Alu 1 312 0 275 293 63 103 chr2 9956829 9956906 -240730948 - MIR SINE MIR -162 100 21 906 271 35 48 chr2 9957033 9957336 -240730518 - L1ME4a LINE L1 -208 5913 5615 2323 73 3 20 chr2 9957336 9957637 -240730217 - AluSc SINE Alu -13 296 1 906 271 35 48 chr2 9957637 9957731 -240730123 - L1ME4a LINE L1 -506 5615 5521 2184 127 10 0 chr2 9958022 9958329 -240729525 - AluSx SINE Alu -2 310 1 2198 74 7 21 chr2 9958346 9958680 -240729174 - AluY SINE Alu 0 330 1 1484 161 48 48 chr2 9958688 9958832 -240729022 - AluJo SINE Alu -21 291 148 2154 85 3 62 chr2 9958832 9959139 -240728715 - AluSp SINE Alu -24 289 1 1484 161 48 48 chr2 9959139 9959285 -240728569 - AluJo SINE Alu -163 149 1 2218 110 0 13 chr2 9959884 9960185 -240727669 + AluSx SINE Alu 7 303 -9 924 152 226 17 chr2 9960188 9960243 -240727611 + Tigger3(Golem) DNA MER2_type 2761 2803 -235 2180 100 11 0 chr2 9960243 9960545 -240727309 + AluSq SINE Alu 2 306 0 924 152 226 17 chr2 9960545 9960718 -240727136 + Tigger3(Golem) DNA MER2_type 2803 3038 0 21 82 0 0 chr2 9960731 9960780 -240727074 + AT_rich Low_complexity Low_complexity 1 49 0 1359 233 10 0 chr2 9960808 9961117 -240726737 - AluSq SINE Alu -1 312 1 2242 99 13 0 chr2 9961261 9961564 -240726290 - AluSx SINE Alu -5 307 1 729 183 0 0 chr2 9962731 9962851 -240725003 + FAM SINE Alu 40 159 -26 234 0 0 0 chr2 9962851 9962877 -240724977 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2193 104 7 19 chr2 9962909 9963217 -240724637 - AluSc SINE Alu -5 304 1 336 70 0 0 chr2 9963946 9963989 -240723865 + Alu SINE Alu 1 43 -259 331 330 26 9 chr2 9964084 9964199 -240723655 - MIR SINE MIR -144 118 2 204 111 0 0 chr2 9964266 9964302 -240723552 + (T)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr2 9964303 9964333 -240723521 + AT_rich Low_complexity Low_complexity 1 30 0 2043 102 17 3 chr2 9964342 9964636 -240723218 + AluSx SINE Alu 1 298 -14 196 309 186 0 chr2 9964842 9964939 -240722915 - L2 LINE L2 -14 3258 3144 345 264 44 0 chr2 9965209 9965300 -240722554 - L2 LINE L2 -17 3255 3161 568 215 164 94 chr2 9965794 9966050 -240721804 - MLT1B LTR MaLR 0 390 117 222 159 23 0 chr2 9966314 9966358 -240721496 + MIR SINE MIR 111 155 -107 2208 101 0 0 chr2 9966382 9966678 -240721176 - AluSg SINE Alu -13 297 2 2089 104 0 23 chr2 9968922 9969221 -240718633 + AluSg SINE Alu 1 292 -18 368 288 16 76 chr2 9970560 9970734 -240717120 - MIR SINE MIR -40 168 2 21 36 0 0 chr2 9970827 9970855 -240716999 + AT_rich Low_complexity Low_complexity 1 28 0 312 173 0 0 chr2 9970857 9970909 -240716945 + L1MD2 LINE L1 6183 6234 -125 323 209 0 114 chr2 9970914 9971115 -240716739 + (TATAG)n Simple_repeat Simple_repeat 3 180 0 456 192 48 0 chr2 9971163 9971267 -240716587 + L1MD2 LINE L1 6251 6359 0 21 0 0 0 chr2 9971357 9971378 -240716476 + AT_rich Low_complexity Low_complexity 1 21 0 1875 153 0 7 chr2 9971381 9971682 -240716172 - AluSx SINE Alu 0 312 14 2193 113 0 0 chr2 9971689 9971990 -240715864 - AluSx SINE Alu -11 301 1 57 61 0 0 chr2 9971994 9972093 -240715761 + AT_rich Low_complexity Low_complexity 1 99 0 263 277 45 45 chr2 9972280 9972392 -240715462 + MER63 DNA MER1_type 682 793 -268 209 318 238 14 chr2 9973432 9973655 -240714199 + L3 LINE CR1 1200 1472 -105 2013 132 13 0 chr2 9973655 9973959 -240713895 + AluSx SINE Alu 1 308 -4 2187 96 3 0 chr2 9974349 9974641 -240713213 + AluSp SINE Alu 1 293 -20 229 294 47 35 chr2 9975053 9975138 -240712716 - L2 LINE L2 -33 3239 3154 339 225 232 0 chr2 9976373 9976511 -240711343 - MIR SINE MIR -12 250 81 2153 115 0 0 chr2 9977617 9977912 -240709942 - AluSx SINE Alu -17 295 1 200 242 116 32 chr2 9979539 9979634 -240708220 - MIR SINE MIR -52 210 108 201 213 0 0 chr2 9980496 9980543 -240707311 + (TG)n Simple_repeat Simple_repeat 1 47 0 1832 115 17 20 chr2 9982453 9982748 -240705106 - AluSq SINE Alu -14 299 6 2041 121 3 16 chr2 9985278 9985591 -240702263 - AluSq SINE Alu -4 309 1 282 56 0 0 chr2 9985611 9985647 -240702207 + (TA)n Simple_repeat Simple_repeat 2 37 0 1549 111 9 0 chr2 9985664 9985890 -240701964 + AluSq SINE Alu 79 306 -7 2189 81 7 7 chr2 9986932 9987227 -240700627 - AluSx SINE Alu -16 296 2 1090 100 0 19 chr2 9987507 9987667 -240700187 + AluSg/x SINE Alu 130 286 -24 1215 101 0 17 chr2 9988021 9988199 -240699655 + AluSg/x SINE Alu 130 304 -6 1024 121 54 24 chr2 9989139 9989246 -240698608 + AluSx SINE Alu 21 136 -176 2264 103 0 10 chr2 9989246 9989556 -240698298 + AluSc SINE Alu 1 307 -2 1024 121 54 24 chr2 9989556 9989614 -240698240 + AluSx SINE Alu 136 191 -121 1574 156 48 4 chr2 9992418 9992688 -240695166 - AluSx SINE Alu -18 294 13 638 87 109 0 chr2 9992788 9992880 -240694974 + AluSx SINE Alu 181 282 -30 253 208 0 0 chr2 9993530 9993578 -240694276 - MER91 DNA MER1_type 0 190 143 2210 115 0 3 chr2 9994350 9994663 -240693191 + AluSx SINE Alu 1 312 0 1411 98 0 5 chr2 9994940 9995134 -240692720 + AluSq SINE Alu 1 193 -120 194 260 40 0 chr2 9995788 9995838 -240692016 + MIR SINE MIR 31 82 -180 495 213 125 7 chr2 9995894 9995975 -240691879 + MIR SINE MIR 111 181 -81 231 61 0 0 chr2 9995975 9996008 -240691846 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 495 213 125 7 chr2 9996008 9996062 -240691792 + MIR SINE MIR 181 262 0 1967 117 32 0 chr2 9996548 9996831 -240691023 - AluSx SINE Alu -12 300 9 1404 159 13 0 chr2 9997418 9997657 -240690197 - AluJb SINE Alu -13 299 58 1696 178 0 7 chr2 9997704 9998013 -240689841 - AluSx SINE Alu 0 307 1 762 151 0 0 chr2 9999970 10000089 -240687765 - AluSx SINE Alu 0 310 192 1060 113 0 0 chr2 10000090 10000231 -240687623 - AluSx SINE Alu -171 141 1 1750 127 7 7 chr2 10000721 10000996 -240686858 + AluSx SINE Alu 9 283 -29 23 33 0 0 chr2 10001335 10001365 -240686489 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10001570 10001596 -240686258 + GC_rich Low_complexity Low_complexity 1 26 0 257 254 55 55 chr2 10002135 10002245 -240685609 + MER69 DNA AcHobo 32 141 -2385 700 177 8 0 chr2 10002263 10002387 -240685467 - FRAM SINE Alu -54 122 1 1405 108 0 0 chr2 10002395 10002589 -240685265 - AluSp SINE Alu -13 300 107 1470 103 0 0 chr2 10002589 10002784 -240685070 - AluSp SINE Alu -118 195 1 282 222 48 0 chr2 10002785 10002848 -240685006 + MER69 DNA AcHobo 132 197 -1029 180 225 0 0 chr2 10002965 10003005 -240684849 - L2 LINE L2 -227 3045 3006 1289 171 3 71 chr2 10004187 10004244 -240683610 - L1MB4 LINE L1 0 6180 6121 371 150 17 0 chr2 10004244 10004304 -240683550 - U7 snRNA snRNA 0 63 3 2142 98 10 3 chr2 10004308 10004604 -240683250 - AluSx SINE Alu -14 298 1 1289 171 3 71 chr2 10004604 10004831 -240683023 - L1MB4 LINE L1 -62 6118 5911 2194 99 3 13 chr2 10004831 10005145 -240682709 - AluSq SINE Alu -2 311 1 1289 171 3 71 chr2 10005145 10005163 -240682691 - L1MB4 LINE L1 -269 5911 5893 435 289 4 83 chr2 10005192 10005458 -240682396 - L1MC4 LINE L1 -371 7671 7427 265 272 102 39 chr2 10006463 10006669 -240681185 + MLT1J1 LTR MaLR 228 446 0 2260 174 33 8 chr2 10006883 10006926 -240680928 - L1MB3 LINE L1 -12 6159 6119 1838 140 7 20 chr2 10006926 10007226 -240680628 - AluJb SINE Alu -16 296 1 2260 174 33 8 chr2 10007226 10007241 -240680613 - L1MB3 LINE L1 -52 6119 6106 1888 126 7 11 chr2 10007241 10007582 -240680272 - AluSp SINE Alu 0 340 1 2260 174 33 8 chr2 10007582 10007996 -240679858 - L1MB3 LINE L1 -65 6106 5711 1779 219 82 13 chr2 10008255 10008706 -240679148 + LTR65 LTR ERV1 167 648 -21 294 284 42 21 chr2 10008723 10008818 -240679036 - MIR SINE MIR -60 202 106 1507 243 43 102 chr2 10008828 10009478 -240678376 - LTR9 LTR ERV1 0 612 1 479 259 98 51 chr2 10009490 10009726 -240678128 - MLT1G1 LTR MaLR -163 432 186 270 263 25 12 chr2 10009753 10009833 -240678021 - MLT1G1 LTR MaLR -500 90 10 240 353 111 24 chr2 10009848 10010137 -240677717 + L2 LINE L2 2959 3272 0 1903 158 3 0 chr2 10010391 10010683 -240677171 - AluJb SINE Alu -19 293 1 22 0 0 0 chr2 10010694 10010716 -240677138 + AT_rich Low_complexity Low_complexity 1 22 0 1883 138 25 0 chr2 10010716 10010998 -240676856 - AluJb SINE Alu -23 289 1 207 0 0 0 chr2 10011008 10011031 -240676823 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2335 62 0 0 chr2 10011033 10011321 -240676533 - AluY SINE Alu -23 288 1 366 299 120 37 chr2 10012230 10012447 -240675407 + L2 LINE L2 2396 2630 -684 1063 323 41 31 chr2 10012471 10012889 -240674965 + LTR16A LTR ERVL 1 422 -28 370 358 74 6 chr2 10012923 10013085 -240674769 + LTR16A LTR ERVL 16 188 -262 251 231 0 0 chr2 10013181 10013233 -240674621 + MLT1K LTR MaLR 177 228 -360 470 315 165 9 chr2 10013263 10013584 -240674270 + MLT1K LTR MaLR 184 554 -34 2915 127 36 18 chr2 10013615 10014116 -240673738 + MLT2A1 LTR ERVL 1 519 -1 3392 185 28 6 chr2 10014218 10015071 -240672783 + L1MB8 LINE L1 5117 5992 -186 534 132 0 97 chr2 10015080 10015128 -240672726 + L1MB8 LINE L1 6073 6105 -73 2265 103 10 0 chr2 10015128 10015419 -240672435 - AluSq SINE Alu -19 294 1 534 132 0 97 chr2 10015419 10015484 -240672370 + L1MB8 LINE L1 6105 6175 -3 409 274 207 58 chr2 10015488 10015839 -240672015 + L2 LINE L2 2735 3189 -124 2176 117 3 0 chr2 10015839 10016122 -240671732 - AluSx SINE Alu -28 284 1 409 274 207 58 chr2 10016122 10016263 -240671591 + L2 LINE L2 3189 3308 -5 2247 129 0 0 chr2 10016301 10016596 -240671258 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr2 10016657 10016679 -240671175 + AT_rich Low_complexity Low_complexity 1 22 0 1814 143 26 32 chr2 10016695 10017037 -240670817 - L1MC1 LINE L1 -6 6327 5988 230 269 19 0 chr2 10018403 10018455 -240669399 + L2 LINE L2 2577 2629 -685 269 132 0 19 chr2 10018468 10018521 -240669333 - L1MA3 LINE L1 0 6305 6254 303 276 198 39 chr2 10018760 10019043 -240668811 + L2 LINE L2 2944 3271 -1 184 204 41 0 chr2 10020662 10020711 -240667143 - L2 LINE L2 -37 3235 3185 611 63 0 0 chr2 10020720 10020799 -240667055 + AluJ/FRAM SINE Alu 227 305 -7 417 265 10 10 chr2 10020806 10020904 -240666950 - L2 LINE L2 -4 3309 3212 550 270 74 14 chr2 10020922 10021137 -240666717 + L1ME3A LINE L1 5610 5837 -333 546 91 0 0 chr2 10023458 10023535 -240664319 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 2193 107 10 3 chr2 10023536 10023826 -240664028 - AluSx SINE Alu -19 293 2 2297 88 3 7 chr2 10024529 10024825 -240663029 + AluSx SINE Alu 1 295 -17 763 178 0 0 chr2 10025115 10025271 -240662583 - FLAM_C SINE Alu 0 157 2 661 199 125 18 chr2 10025310 10025528 -240662326 - L1MB7 LINE L1 0 6168 5933 576 256 63 49 chr2 10026253 10026476 -240661378 - MIR SINE MIR -13 249 24 234 0 0 0 chr2 10026658 10026684 -240661170 + (TG)n Simple_repeat Simple_repeat 1 26 0 354 232 152 56 chr2 10027064 10027189 -240660665 - L2 LINE L2 0 3313 3177 1640 184 122 6 chr2 10027992 10028319 -240659535 - MLT1A1 LTR MaLR 0 365 1 195 294 0 0 chr2 10028736 10028787 -240659067 - MIR SINE MIR -6 256 206 291 238 159 72 chr2 10029462 10029565 -240658289 - LTR50 LTR ERVL 0 795 702 1207 207 194 20 chr2 10029565 10029961 -240657893 + MLT1C LTR MaLR 1 465 -2 291 238 159 72 chr2 10029961 10030147 -240657707 - LTR50 LTR ERVL -93 702 481 198 0 0 0 chr2 10030237 10030259 -240657595 + (GA)n Simple_repeat Simple_repeat 2 23 0 670 186 22 71 chr2 10030396 10030579 -240657275 - LTR41 LTR ERVL -599 174 1 247 348 160 8 chr2 10030769 10030894 -240656960 - MIR SINE MIR -71 137 11 548 252 39 32 chr2 10031647 10031703 -240656151 - MIR SINE MIR -7 255 201 2246 119 0 10 chr2 10031703 10032015 -240655839 - AluSq SINE Alu -4 309 1 548 252 39 32 chr2 10032015 10032113 -240655741 - MIR SINE MIR -61 201 100 185 0 0 39 chr2 10032585 10032611 -240655243 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 224 279 44 15 chr2 10032696 10032764 -240655090 - MIR SINE MIR -171 91 22 331 271 44 117 chr2 10033008 10033325 -240654529 - L2 LINE L2 -346 2968 2675 2239 120 0 0 chr2 10033490 10033791 -240654063 - AluSx SINE Alu -11 301 1 769 276 113 16 chr2 10033848 10034226 -240653628 - L1MC4a LINE L1 -296 5825 5524 317 198 22 0 chr2 10034688 10034779 -240653075 - MER96 DNA MER1_type? -82 93 1 181 276 58 11 chr2 10036871 10036958 -240650896 - MIR3 SINE MIR -103 105 15 220 231 77 77 chr2 10037142 10037220 -240650634 - MIR SINE MIR -16 246 169 298 268 99 42 chr2 10037703 10037845 -240650009 + MIR SINE MIR 47 196 -66 2396 117 120 5 chr2 10037985 10038369 -240649485 - MSTA LTR MaLR 0 428 1 441 134 0 37 chr2 10038369 10038451 -240649403 - MSTA-int LTR MaLR 0 1580 1502 2270 102 0 0 chr2 10038451 10038744 -240649110 - AluSx SINE Alu -19 293 1 533 237 10 110 chr2 10038796 10038873 -240648981 + MER34 LTR ERV1 281 364 -178 4590 97 4 39 chr2 10038873 10039276 -240648578 + MER4A LTR ERV1 1 416 -248 1971 164 0 3 chr2 10039276 10039587 -240648267 + AluJb SINE Alu 1 310 -2 4590 97 4 39 chr2 10039587 10039730 -240648124 + MER4A LTR ERV1 416 521 -143 2323 101 0 7 chr2 10039730 10040026 -240647828 + AluSx SINE Alu 1 294 -18 4590 97 4 39 chr2 10040026 10040166 -240647688 + MER4A LTR ERV1 521 664 0 533 237 10 110 chr2 10040166 10040379 -240647475 + MER34 LTR ERV1 364 542 0 1609 175 26 0 chr2 10040379 10040682 -240647172 - L1MB3 LINE L1 -74 6109 5799 336 200 100 12 chr2 10040682 10040762 -240647092 + MER21B LTR ERV1 1 87 -776 2764 256 46 8 chr2 10040786 10041544 -240646310 + MER21B LTR ERV1 19 805 -58 2509 162 11 62 chr2 10041570 10042127 -240645727 - L1MB3 LINE L1 -371 5812 5287 2353 93 7 0 chr2 10042758 10043060 -240644794 - AluSp SINE Alu -9 304 1 820 233 112 43 chr2 10043205 10043579 -240644275 + MER110A LTR ERV1 39 438 -30 448 228 81 47 chr2 10044351 10044500 -240643354 + MIR SINE MIR 20 173 -89 493 205 0 0 chr2 10046213 10046296 -240641558 - AluJ/FLAM SINE Alu -228 84 2 2436 87 0 0 chr2 10046363 10046662 -240641192 + AluSg SINE Alu 1 299 -11 618 227 28 0 chr2 10046895 10047036 -240640818 - MER58A DNA MER1_type -44 180 36 215 297 72 45 chr2 10047261 10047372 -240640482 - MIR SINE MIR -30 232 119 2476 58 27 0 chr2 10047777 10048069 -240639785 - AluY SINE Alu -11 300 1 819 168 0 0 chr2 10048117 10048242 -240639612 + FLAM_A SINE Alu 18 142 0 203 252 107 48 chr2 10048611 10048714 -240639140 - MIR SINE MIR -59 203 95 2242 119 3 3 chr2 10049619 10049931 -240637923 + AluSx SINE Alu 1 312 0 2015 116 38 20 chr2 10050013 10050306 -240637548 + AluSx SINE Alu 1 298 -14 184 308 221 29 chr2 10050435 10050539 -240637315 + MER5A DNA MER1_type 65 188 -1 * 193 222 44 0 chr2 10050539 10050581 -240637273 - MIR3 SINE MIR -52 156 113 203 268 18 0 chr2 10050725 10050781 -240637073 + GA-rich Low_complexity Low_complexity 4 60 0 274 215 118 0 chr2 10050887 10050989 -240636865 - L1ME LINE L1 -306 5856 5743 373 253 120 19 chr2 10051044 10051202 -240636652 - MIR SINE MIR -27 235 62 204 97 0 0 chr2 10051620 10051651 -240636203 + (A)n Simple_repeat Simple_repeat 1 31 0 1132 224 88 58 chr2 10051689 10051935 -240635919 + Charlie4a DNA MER1_type 37 274 -1687 1391 171 0 0 chr2 10051935 10052169 -240635685 + MER46A DNA MER2_type 3 236 0 1132 224 88 58 chr2 10052169 10052297 -240635557 + Charlie4a DNA MER1_type 274 430 -1531 1612 185 9 64 chr2 10052297 10052627 -240635227 - AluJb SINE Alu 0 312 1 1132 224 88 58 chr2 10052627 10052703 -240635151 + Charlie4a DNA MER1_type 430 502 -6 1810 167 11 0 chr2 10052719 10053001 -240634853 + AluJb SINE Alu 7 291 -21 314 304 80 9 chr2 10054604 10054716 -240633138 - MIR SINE MIR -38 224 105 187 150 25 25 chr2 10054826 10054866 -240632988 + L2 LINE L2 3176 3215 -98 2478 80 3 0 chr2 10054873 10055173 -240632681 - AluSp SINE Alu -12 301 1 383 200 12 0 chr2 10055486 10055566 -240632288 + Tigger3(Golem) DNA MER2_type 28 108 -2921 * 506 131 39 108 chr2 10055558 10055620 -240632234 + Tigger3(Golem) DNA MER2_type 2279 2329 -700 2581 62 0 0 chr2 10055620 10055924 -240631930 - AluY SINE Alu -7 304 1 506 131 39 108 chr2 10055924 10055991 -240631863 + Tigger3(Golem) DNA MER2_type 2329 2399 -630 6021 25 5 0 chr2 10055992 10056739 -240631115 - L1P LINE L1 -1097 5049 4299 7451 15 42 0 chr2 10056739 10057754 -240630100 + L1PA2 LINE L1 5104 6155 0 454 132 49 56 chr2 10057756 10057802 -240630052 + Tigger3(Golem) DNA MER2_type 2381 2426 -603 1951 130 23 23 chr2 10057802 10058109 -240629745 + AluJo SINE Alu 1 307 -5 454 132 49 56 chr2 10058109 10058206 -240629648 + Tigger3(Golem) DNA MER2_type 2426 2523 -506 640 199 7 41 chr2 10058212 10058358 -240629496 + FLAM_C SINE Alu 3 143 0 229 135 19 0 chr2 10058359 10058411 -240629443 + Tigger3(Golem) DNA MER2_type 2515 2567 -462 1616 142 45 7 chr2 10058416 10058704 -240629150 + Tigger3(Golem) DNA MER2_type 2683 2981 -48 1638 148 79 11 chr2 10058928 10059206 -240628648 - AluJo SINE Alu -15 297 1 226 286 0 0 chr2 10059246 10059316 -240628538 - L1M4 LINE L1 -2225 3921 3852 216 293 157 36 chr2 10059515 10059655 -240628199 - MIR SINE MIR -42 220 64 276 281 47 47 chr2 10059798 10059926 -240627928 - L2 LINE L2 -523 2791 2664 224 274 271 31 chr2 10059986 10060344 -240627510 - L2 LINE L2 -1343 1971 1528 961 162 203 22 chr2 10060433 10060542 -240627312 + MER33 DNA MER1_type 5 93 -2492 2071 102 60 0 chr2 10060542 10060825 -240627029 - AluSx SINE Alu -12 300 1 961 162 203 22 chr2 10060825 10060986 -240626868 + MER33 DNA MER1_type 93 324 0 1200 137 188 74 chr2 10061111 10061382 -240626472 + AluJb SINE Alu 1 302 0 545 297 120 0 chr2 10061832 10062007 -240625847 - MIR SINE MIR -28 234 39 1372 187 126 0 chr2 10062965 10063227 -240624627 + AluJo SINE Alu 2 296 -6 520 160 36 75 chr2 10063227 10063395 -240624459 - MIR SINE MIR -60 202 47 2247 76 21 7 chr2 10063635 10063926 -240623928 - AluSp SINE Alu -18 295 1 23 33 0 0 chr2 10064292 10064322 -240623532 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10064527 10064553 -240623301 + GC_rich Low_complexity Low_complexity 1 26 0 291 198 83 62 chr2 10065061 10065157 -240622697 + MIR SINE MIR 89 186 -76 2162 124 3 7 chr2 10065157 10065463 -240622391 + AluSq SINE Alu 1 305 -8 306 264 100 27 chr2 10065475 10065585 -240622269 + L1MCa LINE L1 1431 1548 -4878 209 227 0 27 chr2 10065580 10065655 -240622199 + CT-rich Low_complexity Low_complexity 3 75 0 * 181 0 0 0 chr2 10065727 10065747 -240622107 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 2073 105 0 44 chr2 10065747 10066043 -240621811 - AluSx SINE Alu -1 302 1 923 130 0 15 chr2 10066063 10066194 -240621660 - AluJb SINE Alu -183 129 1 1053 309 55 28 chr2 10066199 10067023 -240620831 - L1M4 LINE L1 -964 5182 4337 817 142 0 17 chr2 10067053 10067173 -240620681 - FLAM_C SINE Alu -25 118 1 634 208 0 0 chr2 10067221 10067327 -240620527 + AluJb SINE Alu 190 295 -17 714 239 95 104 chr2 10067352 10067775 -240620079 + L1ME3A LINE L1 5533 5951 -219 2485 204 29 18 chr2 10068119 10068663 -240619191 + MER44D DNA MER2_type 1 605 0 320 307 112 13 chr2 10069207 10069384 -240618470 - MIR SINE MIR -56 152 3 539 246 119 42 chr2 10069507 10069743 -240618111 + MLT1L LTR MaLR 42 295 -320 238 244 87 61 chr2 10070285 10070400 -240617454 + MLT1L LTR MaLR 178 295 -320 860 260 132 3 chr2 10072501 10072828 -240615026 - MLT1B LTR MaLR -1 389 21 252 254 0 0 chr2 10073290 10073345 -240614509 + (TG)n Simple_repeat Simple_repeat 1 55 0 347 345 62 7 chr2 10075395 10075540 -240612314 + MIR3 SINE MIR 41 193 -15 413 297 22 7 chr2 10075589 10075740 -240612114 + MIR SINE MIR 37 188 -57 687 291 23 0 chr2 10075912 10076087 -240611767 + MER91A DNA MER1_type 1 179 -17 276 278 0 0 chr2 10076139 10076193 -240611661 + MER91A DNA MER1_type 134 187 -3 452 320 88 24 chr2 10076599 10076930 -240610924 - LTR16A LTR ERVL 0 450 99 23 0 0 0 chr2 10077003 10077026 -240610828 + AT_rich Low_complexity Low_complexity 1 23 0 252 211 74 42 chr2 10078226 10078321 -240609533 - MIR SINE MIR -95 113 16 1184 201 132 3 chr2 10078674 10078977 -240608877 + L1MC1 LINE L1 5992 6333 0 326 287 80 0 chr2 10078996 10079146 -240608708 - MER112 DNA MER1_type -11 249 88 193 184 0 0 chr2 10079192 10079230 -240608624 - MIR SINE MIR -125 137 100 193 177 51 165 chr2 10079564 10079623 -240608231 - L2 LINE L2 0 3313 3264 186 43 0 0 chr2 10079623 10079646 -240608208 + (CA)n Simple_repeat Simple_repeat 1 23 0 193 177 51 165 chr2 10079646 10079665 -240608189 - L2 LINE L2 -49 3264 3244 1680 242 82 11 chr2 10080030 10080554 -240607300 - MER74B LTR ERVL -59 563 3 2022 190 73 7 chr2 10081347 10081784 -240606070 + MLT1C LTR MaLR 2 467 0 2073 113 3 7 chr2 10081807 10082100 -240605754 - AluSg SINE Alu -14 296 5 267 159 0 0 chr2 10082100 10082144 -240605710 - Alu SINE Alu -255 44 1 197 304 0 36 chr2 10082152 10082208 -240605646 + MIR SINE MIR 105 152 -56 215 383 12 0 chr2 10082568 10082649 -240605205 - L2 LINE L2 -31 3241 3160 448 274 20 26 chr2 10082774 10082927 -240604927 + MER3 DNA MER1_type 1 152 -57 1256 199 78 57 chr2 10082928 10083217 -240604637 - L1MB8 LINE L1 -9 6169 5887 198 0 0 0 chr2 10083217 10083239 -240604615 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2040 110 32 0 chr2 10083240 10083521 -240604333 - AluSx SINE Alu -22 290 1 1256 199 78 57 chr2 10083521 10083616 -240604238 - L1MB8 LINE L1 -290 5888 5775 29 0 0 0 chr2 10085589 10085618 -240602236 + AT_rich Low_complexity Low_complexity 1 29 0 2345 83 7 0 chr2 10085746 10086046 -240601808 - AluSg SINE Alu -7 303 2 488 285 107 47 chr2 10086286 10086669 -240601185 - MLT1K LTR MaLR -40 548 143 2313 102 57 25 chr2 10086696 10087049 -240600805 + THE1B LTR MaLR 1 364 0 462 264 51 13 chr2 10087458 10087617 -240600237 - MIR SINE MIR -56 152 38 385 309 40 0 chr2 10087738 10087864 -240599990 + L3 LINE CR1 1419 1549 -28 2081 218 78 18 chr2 10088385 10089010 -240598844 - L1MB8 LINE L1 -751 5395 4733 1141 223 14 44 chr2 10089013 10089377 -240598477 - L1MB8 LINE L1 -2391 3755 3403 328 333 51 17 chr2 10089438 10089555 -240598299 + L2 LINE L2 3146 3266 -6 414 294 138 33 chr2 10089680 10090071 -240597783 + L1MC/D LINE L1 5349 5780 -2028 2061 199 185 16 chr2 10090208 10090766 -240597088 + MLT1E1 LTR MaLR 1 652 -2 240 267 19 57 chr2 10091371 10091476 -240596378 - MIR SINE MIR -54 208 108 234 243 27 0 chr2 10091663 10091737 -240596117 + G-rich Low_complexity Low_complexity 5 80 0 5423 34 2 0 chr2 10091811 10092403 -240595451 - SVA Other Other 0 1386 794 1864 164 3 26 chr2 10093047 10093359 -240594495 + AluJb SINE Alu 5 309 -3 321 100 0 0 chr2 10093359 10093409 -240594445 + (CA)n Simple_repeat Simple_repeat 2 51 0 1093 240 75 9 chr2 10093440 10093773 -240594081 - MER90 LTR ERV1 -1 613 259 490 319 43 11 chr2 10094974 10095162 -240592692 + MIR SINE MIR 16 209 -53 194 345 35 26 chr2 10095202 10095315 -240592539 + L3 LINE CR1 1109 1222 -355 1146 244 47 22 chr2 10096267 10096454 -240591400 - MLT1B LTR MaLR -17 373 192 2212 85 52 36 chr2 10096454 10096760 -240591094 - AluSx SINE Alu -1 311 1 1146 244 47 22 chr2 10096760 10096936 -240590918 - MLT1B LTR MaLR -198 192 1 571 281 45 11 chr2 10096961 10097182 -240590672 + MIR SINE MIR 17 244 -18 293 368 105 13 chr2 10097518 10097670 -240590184 - L2 LINE L2 -14 3258 3093 210 231 0 0 chr2 10097740 10097792 -240590062 - MIR SINE MIR -91 117 66 192 338 22 37 chr2 10098710 10098846 -240589008 + MIR3 SINE MIR 30 163 -45 411 325 110 0 chr2 10098889 10099043 -240588811 + MIR SINE MIR 35 205 -57 1525 237 47 24 chr2 10099093 10099545 -240588309 + MLT1C LTR MaLR 6 467 0 713 271 22 118 chr2 10100025 10100745 -240587109 - L1M4 LINE L1 -4012 3126 2476 189 0 0 0 chr2 10101018 10101039 -240586815 + (A)n Simple_repeat Simple_repeat 1 21 0 2086 116 0 0 chr2 10101046 10101313 -240586541 - AluSg SINE Alu -43 267 1 2534 196 84 55 chr2 10101321 10102566 -240585288 - L1M4 LINE L1 -4532 2425 961 301 275 9 37 chr2 10102585 10102694 -240585160 - L2 LINE L2 0 3272 3167 216 0 0 0 chr2 10103080 10103104 -240584750 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 204 267 10 89 chr2 10103164 10103265 -240584589 - L3 LINE CR1 -896 681 589 2176 133 3 3 chr2 10104019 10104327 -240583527 - AluSx SINE Alu -4 308 1 823 230 0 0 chr2 10104331 10104509 -240583345 - L1M4 LINE L1 -5886 973 796 1529 226 36 67 chr2 10104524 10104971 -240582883 - L1M4 LINE L1 -6422 437 5 2327 106 0 0 chr2 10105112 10105404 -240582450 - AluSp SINE Alu -21 292 1 2225 121 3 0 chr2 10105404 10105701 -240582153 - AluSx SINE Alu -14 298 1 259 217 0 0 chr2 10105782 10105839 -240582015 + MIR SINE MIR 95 143 -65 408 328 54 47 chr2 10105843 10106160 -240581694 + MLT1J LTR MaLR 43 361 -150 1833 195 0 3 chr2 10106179 10106492 -240581362 - AluJo SINE Alu 0 312 1 573 252 8 0 chr2 10106493 10106624 -240581230 + L1ME3 LINE L1 6031 6162 0 199 321 0 0 chr2 10106827 10106883 -240580971 + L2 LINE L2 3214 3269 -3 225 315 0 0 chr2 10107622 10107676 -240580178 - MIR SINE MIR -68 140 87 180 247 149 39 chr2 10107891 10108045 -240579809 - L2 LINE L2 -275 2997 2827 584 212 92 26 chr2 10108498 10108868 -240578986 - MLT1C LTR MaLR -6 461 54 3255 150 51 23 chr2 10108868 10109499 -240578355 + MER51A LTR ERV1 1 640 0 257 179 54 36 chr2 10109499 10109554 -240578300 - MLT1C LTR MaLR -410 57 2 320 324 105 0 chr2 10110266 10110371 -240577483 + MIR SINE MIR 49 164 -98 1637 255 38 24 chr2 10110722 10111246 -240576608 - L1ME1 LINE L1 -2 6176 5664 1453 80 35 0 chr2 10111246 10111445 -240576409 - L1PA10 LINE L1 -5 6163 5958 1637 255 38 24 chr2 10111445 10111497 -240576357 - L1ME1 LINE L1 -514 5664 5614 1228 61 0 0 chr2 10111505 10111653 -240576201 - AluSp/q SINE Alu -8 305 158 182 200 0 29 chr2 10112327 10112362 -240575492 - MIR SINE MIR -7 255 222 221 324 0 15 chr2 10112419 10112487 -240575367 - MIR SINE MIR -166 96 30 848 218 0 6 chr2 10114532 10114711 -240573143 - MLT1B LTR MaLR -1 389 212 1520 173 114 13 chr2 10114728 10115122 -240572732 - LTR48 LTR ERV1 -30 757 324 2311 121 3 0 chr2 10115611 10115916 -240571938 - AluSx SINE Alu -3 309 4 588 246 15 0 chr2 10115928 10116062 -240571792 - MLT1B LTR MaLR -238 136 1 180 239 43 0 chr2 10116127 10116173 -240571681 - MIR SINE MIR -60 148 101 664 234 102 51 chr2 10116370 10116626 -240571228 - MER46C DNA MER2_type -26 312 44 2328 111 0 9 chr2 10117526 10117842 -240570012 - AluSq SINE Alu 0 313 1 235 154 0 0 chr2 10118082 10118121 -240569733 - HAL1 LINE L1 -1837 670 632 579 187 129 19 chr2 10118148 10118303 -240569551 - MLT1C LTR MaLR -295 172 1 2424 90 8 8 chr2 10118385 10118740 -240569114 - THE1A LTR MaLR 0 355 1 3026 213 236 35 chr2 10120174 10121154 -240566700 - MLT-int LTR MaLR -382 1353 177 3118 164 16 41 chr2 10121344 10121978 -240565876 + LTR35 LTR ERV1 1 618 0 22 36 0 55 chr2 10122567 10122622 -240565232 + GC_rich Low_complexity Low_complexity 1 52 0 229 200 18 0 chr2 10122771 10122826 -240565028 + (CGG)n Simple_repeat Simple_repeat 1 56 0 296 162 321 23 chr2 10124973 10125102 -240562752 - MIR SINE MIR -62 146 18 377 281 175 6 chr2 10125429 10125589 -240562265 + MIR SINE MIR 73 259 -3 210 299 155 0 chr2 10125893 10125990 -240561864 + MIR3 SINE MIR 89 200 -8 542 190 0 66 chr2 10126899 10127020 -240560834 + MER5B DNA MER1_type 6 118 -60 463 116 0 0 chr2 10127023 10127092 -240560762 - AluJ/FRAM SINE Alu -14 298 230 506 243 169 0 chr2 10127093 10127241 -240560613 - MER5A DNA MER1_type -7 182 10 795 209 28 11 chr2 10127258 10127435 -240560419 + MER58 DNA MER1_type 3 182 -2238 317 355 8 16 chr2 10127457 10127581 -240560273 - L2 LINE L2 -232 3040 2918 189 0 0 0 chr2 10128143 10128164 -240559690 + (TG)n Simple_repeat Simple_repeat 2 22 0 411 316 35 6 chr2 10128197 10128368 -240559486 - MIR SINE MIR -39 223 48 264 149 0 0 chr2 10131113 10131160 -240556694 + (TG)n Simple_repeat Simple_repeat 1 47 0 271 315 46 9 chr2 10131644 10131752 -240556102 + L2 LINE L2 3197 3308 -5 297 280 21 11 chr2 10134002 10134095 -240553759 - L2 LINE L2 -17 3296 3203 260 258 0 0 chr2 10135230 10135296 -240552558 + L2 LINE L2 3026 3091 -181 982 172 18 57 chr2 10136390 10136617 -240551237 - MER20 DNA MER1_type 0 219 2 233 299 25 11 chr2 10136828 10136927 -240550927 - MIR SINE MIR -63 145 50 1582 193 70 10 chr2 10136937 10137320 -240550534 + L1MB8 LINE L1 5771 6176 -2 192 125 0 0 chr2 10137320 10137352 -240550502 + (CA)n Simple_repeat Simple_repeat 1 32 0 558 232 26 57 chr2 10137496 10137690 -240550164 - MER5A DNA MER1_type -1 188 1 917 173 19 0 chr2 10137770 10137926 -240549928 + FRAM SINE Alu 1 159 -7 475 331 7 47 chr2 10138069 10138152 -240549702 - L1M4 LINE L1 -2149 3997 3912 2229 119 0 3 chr2 10138152 10138454 -240549400 - AluSx SINE Alu -1 311 11 475 331 7 47 chr2 10138454 10138793 -240549061 - L1M4 LINE L1 -2234 3912 3592 459 308 146 48 chr2 10138844 10139316 -240548538 + L2 LINE L2 2797 3312 -1 225 207 0 0 chr2 10139688 10139746 -240548108 - HAL1 LINE L1 -341 2166 2109 551 311 186 29 chr2 10139957 10140548 -240547306 - HAL1 LINE L1 -593 1914 1231 11396 118 8 7 chr2 10140679 10142649 -240545205 - L1P LINE L1 -1967 4179 2201 2215 116 0 0 chr2 10142649 10142953 -240544901 - AluSx SINE Alu 0 304 1 11396 118 8 7 chr2 10142953 10143046 -240544808 - L1P LINE L1 -3945 2201 2110 2605 199 15 2 chr2 10143210 10143798 -240544056 + L1M4 LINE L1 4103 4698 -1448 2120 119 10 13 chr2 10144150 10144462 -240543392 + AluY SINE Alu 1 311 0 2359 96 10 10 chr2 10146839 10147152 -240540702 - AluSq SINE Alu 0 313 1 226 276 26 13 chr2 10147783 10147859 -240539995 + MIR3 SINE MIR 124 200 -8 2041 135 0 10 chr2 10148609 10148905 -240538949 - AluSp SINE Alu -20 293 1 317 43 21 0 chr2 10149680 10149727 -240538127 + (CA)n Simple_repeat Simple_repeat 2 49 0 215 340 53 0 chr2 10149743 10149837 -240538017 - L2 LINE L2 0 3272 3174 216 299 15 0 chr2 10150075 10150142 -240537712 + L2 LINE L2 3205 3272 0 186 43 0 0 chr2 10151370 10151393 -240536461 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 9279 14 0 0 chr2 10152151 10154055 -240533799 - L1HS LINE L1 0 6155 4251 313 313 95 28 chr2 10154415 10154594 -240533260 + MIR SINE MIR 18 208 -54 279 93 0 0 chr2 10155297 10155340 -240532514 + L2 LINE L2 3270 3312 -1 237 221 0 0 chr2 10156973 10157041 -240530813 + (TG)n Simple_repeat Simple_repeat 1 68 0 711 199 19 78 chr2 10157152 10157358 -240530496 - MLT1C LTR MaLR -270 197 4 214 289 39 0 chr2 10157920 10158048 -240529806 + L2 LINE L2 2827 2959 -354 20277 46 49 3 chr2 10158468 10161122 -240526732 + L1P LINE L1 1 2778 -3368 2665 105 12 0 chr2 10161342 10161741 -240526113 - L1PB3 LINE L1 -168 5986 5583 1258 206 4 13 chr2 10161743 10161971 -240525883 + AluJb SINE Alu 1 226 -86 765 87 8 16 chr2 10162053 10162179 -240525675 + (GAAA)n Simple_repeat Simple_repeat 2 126 0 13998 208 9 12 chr2 10162179 10166000 -240521854 - L1PB3 LINE L1 -562 5592 1711 536 213 52 0 chr2 10166007 10166143 -240521711 + L1MB8 LINE L1 6028 6170 -8 296 210 16 0 chr2 10167301 10167363 -240520491 - MER103 DNA DNA -87 79 17 684 236 14 48 chr2 10167695 10167903 -240519951 + MER112 DNA MER1_type 28 228 -32 293 264 148 22 chr2 10167929 10168111 -240519743 - Charlie8 DNA MER1_type -2135 282 78 2072 106 3 61 chr2 10168126 10168455 -240519399 + AluSg SINE Alu 1 310 0 480 288 119 30 chr2 10169185 10169525 -240518329 - MLT1J LTR MaLR -5 610 136 249 163 0 0 chr2 10169583 10169632 -240518222 + A-rich Low_complexity Low_complexity 1 49 0 281 372 121 4 chr2 10169786 10170025 -240517829 - L2 LINE L2 -796 2518 2252 228 278 69 0 chr2 10170251 10170323 -240517531 + Charlie7 DNA MER1_type 5 81 -2531 1737 223 76 5 chr2 10170329 10170750 -240517104 - MLT1C LTR MaLR 0 467 17 1891 122 60 43 chr2 10172096 10172464 -240515390 + THE1C LTR MaLR 2 375 0 1767 221 37 16 chr2 10173497 10173932 -240513922 - L1MB5 LINE L1 0 6174 5731 180 254 68 17 chr2 10175037 10175096 -240512758 + L2 LINE L2 3210 3271 -1 368 277 154 10 chr2 10175852 10176047 -240511807 + MER2 DNA MER2_type 123 345 0 378 363 12 0 chr2 10176069 10176237 -240511617 + (TGAG)n Simple_repeat Simple_repeat 2 171 0 327 186 29 14 chr2 10176687 10176757 -240511097 + MIR SINE MIR 80 150 -112 203 314 102 0 chr2 10176980 10177098 -240510756 - L2 LINE L2 -1 3271 3142 2235 115 118 10 chr2 10177259 10177642 -240510212 - MSTA LTR MaLR -4 424 1 7865 161 47 37 chr2 10177642 10179205 -240508649 - MSTA-int LTR MaLR 0 1580 3 1854 147 155 11 chr2 10179207 10179581 -240508273 - MSTA LTR MaLR 0 428 1 3376 195 15 9 chr2 10179825 10180492 -240507362 + LTR51 LTR ERV1 1 671 0 334 299 190 11 chr2 10180522 10180696 -240507158 - MIR SINE MIR -57 205 1 245 0 0 166 chr2 10181833 10182183 -240505671 + (GTGTG)n Simple_repeat Simple_repeat 1 291 0 304 338 94 25 chr2 10182239 10182440 -240505414 - MIR SINE MIR -27 235 21 482 253 37 19 chr2 10182747 10182909 -240504945 + LTR16C LTR ERVL 76 240 -251 182 211 100 78 chr2 10183464 10183554 -240504300 + MIR SINE MIR 41 132 -76 193 308 161 15 chr2 10183857 10183987 -240503867 + L2 LINE L2 3122 3270 -2 910 118 0 0 chr2 10185048 10185192 -240502662 - L1MA2 LINE L1 0 6304 6161 1481 196 99 6 chr2 10185861 10186193 -240501661 + MLT1A2 LTR MaLR 1 363 -11 288 261 193 8 chr2 10186296 10186415 -240501439 + MIR SINE MIR 48 188 -74 1866 146 13 49 chr2 10186631 10186939 -240500915 - AluSx SINE Alu -15 297 1 30 45 0 0 chr2 10187125 10187169 -240500685 + AT_rich Low_complexity Low_complexity 1 44 0 553 355 55 4 chr2 10187173 10187429 -240500425 + L1ME LINE L1 4981 5249 -897 698 296 86 26 chr2 10187445 10187641 -240500213 + L1ME LINE L1 5265 5448 -673 2282 87 14 3 chr2 10187641 10187929 -240499925 + AluSc SINE Alu 1 291 -18 698 296 86 26 chr2 10187929 10188184 -240499670 + L1ME LINE L1 5448 5743 -378 25 0 0 0 chr2 10188335 10188360 -240499494 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 10188485 10188514 -240499340 + AT_rich Low_complexity Low_complexity 1 29 0 199 278 0 0 chr2 10189926 10189980 -240497874 - MIR SINE MIR -68 140 87 503 225 155 0 chr2 10190499 10190641 -240497213 + MER45A DNA AcHobo 3 166 -12 2699 178 12 21 chr2 10190684 10191264 -240496590 - L1MB7 LINE L1 -17 6167 5593 317 205 72 12 chr2 10191266 10191349 -240496505 - MER50 LTR ERV1 -130 604 517 1696 172 25 0 chr2 10191388 10191707 -240496147 - L1MB7 LINE L1 -572 5608 5282 922 206 57 8 chr2 10192576 10192824 -240495030 + LTR16C LTR ERVL 232 491 0 3431 52 4 4 chr2 10193947 10194404 -240493450 - L1PA7 LINE L1 0 6154 5698 362 244 41 57 chr2 10194563 10194629 -240493225 - MIR SINE MIR -36 226 161 2049 187 65 9 chr2 10194629 10195089 -240492765 - MER66B LTR ERV1 0 486 1 362 244 41 57 chr2 10195089 10195145 -240492709 - MIR SINE MIR -101 161 106 273 252 111 37 chr2 10196068 10196203 -240491651 - HAL1b LINE L1 -10 1338 1194 224 323 79 16 chr2 10198084 10198211 -240489643 - MIR3 SINE MIR -61 147 13 719 183 7 0 chr2 10198654 10198950 -240488904 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 1650 127 77 82 chr2 10199001 10199336 -240488518 + THE1C LTR MaLR 1 335 -40 2219 88 21 0 chr2 10199336 10199518 -240488336 - AluY SINE Alu 0 311 119 297 0 0 0 chr2 10199518 10199551 -240488303 + (TG)n Simple_repeat Simple_repeat 2 34 0 2219 88 21 0 chr2 10199551 10199653 -240488201 - AluY SINE Alu -192 119 21 1650 127 77 82 chr2 10199653 10199694 -240488160 + THE1C LTR MaLR 335 375 0 192 351 0 63 chr2 10200660 10200771 -240487083 - MIR SINE MIR -87 121 18 248 189 0 0 chr2 10201451 10201504 -240486350 - MIR SINE MIR -86 122 70 201 272 29 68 chr2 10201792 10201895 -240485959 - MIR SINE MIR -52 210 112 1921 209 55 24 chr2 10203610 10204064 -240483790 - L1MDa LINE L1 -6058 482 15 330 194 0 0 chr2 10204351 10204423 -240483431 + GA-rich Low_complexity Low_complexity 2 73 0 192 387 65 0 chr2 10207763 10207887 -240479967 - MIR SINE MIR -6 256 125 1020 258 127 39 chr2 10208786 10209223 -240478631 + MLT1D LTR MaLR 1 481 -24 213 94 0 0 chr2 10209223 10209255 -240478599 + (TTAGGG)n Simple_repeat Simple_repeat 4 35 0 1020 258 127 39 chr2 10209255 10209274 -240478580 + MLT1D LTR MaLR 481 497 -8 503 305 13 7 chr2 10209376 10209527 -240478327 - MIR SINE MIR -98 164 13 301 293 109 46 chr2 10209563 10209737 -240478117 + L1ME4a LINE L1 5707 5891 -230 244 330 30 0 chr2 10209962 10210062 -240477792 + MIR SINE MIR 105 207 -55 1247 33 0 0 chr2 10210363 10210557 -240477297 + L1PA3 LINE L1 5994 6187 0 1089 76 0 0 chr2 10211394 10211539 -240476315 - L1P2 LINE L1 -427 5727 5583 1072 62 0 0 chr2 10211539 10211674 -240476180 + L1PA5 LINE L1 6010 6154 0 315 85 0 0 chr2 10212086 10212133 -240475721 + MADE1 DNA Mariner 34 80 0 38 75 0 0 chr2 10212161 10212241 -240475613 + AT_rich Low_complexity Low_complexity 1 80 0 345 220 11 22 chr2 10212319 10212410 -240475444 + L1MC5 LINE L1 7824 7913 -48 3051 87 9 9 chr2 10213654 10214103 -240473751 + L1PA13 LINE L1 5709 6157 -6 1936 190 94 14 chr2 10214143 10214580 -240473274 + MER70A LTR ERVL 1 472 0 2193 133 0 16 chr2 10214672 10214988 -240472866 + AluSx SINE Alu 1 311 -1 258 32 0 0 chr2 10215607 10215638 -240472216 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2171 142 3 0 chr2 10215648 10215951 -240471903 - AluSx SINE Alu -8 304 1 2358 125 39 14 chr2 10215957 10216373 -240471481 + MSTA LTR MaLR 1 426 -2 908 267 28 16 chr2 10216459 10216710 -240471144 + MIR SINE MIR 8 261 -1 271 296 0 0 chr2 10217083 10217164 -240470690 + MIR SINE MIR 50 130 -132 519 272 47 11 chr2 10217970 10218161 -240469693 + L1M4 LINE L1 4774 4971 -1175 1965 176 3 0 chr2 10219021 10219328 -240468526 - AluJb SINE Alu 0 312 5 294 298 70 26 chr2 10219328 10219442 -240468412 - MIR SINE MIR -113 149 31 279 331 31 23 chr2 10220229 10220359 -240467495 + MIR SINE MIR 11 141 -121 285 125 0 0 chr2 10220378 10220426 -240467428 - MSTA LTR MaLR -36 392 345 293 257 55 28 chr2 10220562 10220671 -240467183 + MIR SINE MIR 81 192 -70 1500 153 163 10 chr2 10220800 10221101 -240466753 - MSTA LTR MaLR -70 358 12 328 310 103 35 chr2 10222006 10222151 -240465703 - L2 LINE L2 -1 3312 3158 1749 125 15 0 chr2 10222905 10223169 -240464685 - MSTC LTR MaLR 0 428 161 2240 226 66 32 chr2 10223172 10223854 -240464000 + MER72 LTR ERV1 5 709 -13 302 138 0 31 chr2 10223854 10223919 -240463935 + MER49 LTR ERV1 861 923 0 755 166 76 0 chr2 10223920 10224065 -240463789 - MSTC LTR MaLR -272 156 1 209 196 157 0 chr2 10224443 10224494 -240463360 - L2 LINE L2 0 3272 3214 2493 164 39 2 chr2 10224574 10224983 -240462871 - MSTB LTR MaLR -2 424 1 2559 152 21 8 chr2 10225405 10225860 -240461994 - LTR45B LTR ERV1 -19 512 7 204 300 79 45 chr2 10225959 10226147 -240461707 - MIR SINE MIR -69 193 2 180 0 0 0 chr2 10227079 10227099 -240460755 + (A)n Simple_repeat Simple_repeat 1 20 0 183 162 0 0 chr2 10227537 10227574 -240460280 + GA-rich Low_complexity Low_complexity 2 38 0 398 283 41 0 chr2 10228857 10229002 -240458852 - LTR67 LTR ERVL -7 550 400 430 253 11 0 chr2 10229474 10229569 -240458285 - MER5A DNA MER1_type -93 96 1 313 276 106 64 chr2 10229797 10230080 -240457774 - HAL1 LINE L1 -648 1859 1565 1202 188 49 93 chr2 10230085 10230393 -240457461 - MLT1D LTR MaLR -93 412 125 2333 75 31 0 chr2 10230393 10230685 -240457169 - AluY SINE Alu -10 301 1 1202 188 49 93 chr2 10230685 10230786 -240457068 - MLT1D LTR MaLR -380 125 21 2207 113 0 0 chr2 10230837 10231156 -240456698 - AluSx SINE Alu 0 319 1 192 77 0 0 chr2 10232058 10232084 -240455770 + (CAA)n Simple_repeat Simple_repeat 2 27 0 407 233 20 64 chr2 10232168 10232370 -240455484 - HAL1 LINE L1 -957 1550 1358 2206 134 0 0 chr2 10232474 10232779 -240455075 + AluSx SINE Alu 1 305 -7 927 309 99 41 chr2 10232919 10234253 -240453601 - L1ME3A LINE L1 -204 5966 4485 1526 201 4 14 chr2 10234253 10234557 -240453297 - AluJo SINE Alu 0 307 7 927 309 99 41 chr2 10234557 10235243 -240452611 - L1ME3A LINE L1 -1685 4485 3840 2895 237 47 21 chr2 10235679 10236427 -240451427 + L1M4 LINE L1 8 774 -5768 2743 186 80 7 chr2 10236424 10237036 -240450818 + L1MB7 LINE L1 5383 6039 -145 * 883 116 98 23 chr2 10237070 10237243 -240450611 - L1PB3 LINE L1 0 6154 5969 610 285 36 5 chr2 10237923 10238116 -240449738 - MIR SINE MIR -32 230 32 394 292 0 18 chr2 10240142 10240255 -240447599 - MIR SINE MIR -118 144 34 615 222 84 67 chr2 10241264 10241383 -240446471 - LTR37A LTR ERV1 -25 401 285 411 38 0 0 chr2 10241383 10241436 -240446418 + (TG)n Simple_repeat Simple_repeat 1 53 0 615 222 84 67 chr2 10241436 10241672 -240446182 - LTR37A LTR ERV1 -141 285 40 225 65 0 0 chr2 10241691 10241722 -240446132 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2101 117 74 14 chr2 10241765 10242117 -240445737 - THE1C LTR MaLR -2 373 1 674 245 136 19 chr2 10242540 10242797 -240445057 - L2 LINE L2 0 3313 3027 707 277 60 16 chr2 10242856 10243105 -240444749 + Zaphod DNA AcHobo 3740 3999 -32 646 246 33 15 chr2 10244579 10244807 -240443047 + MER106B DNA MER1_type 1 1059 0 797 239 164 109 chr2 10244894 10245760 -240442094 - L2 LINE L2 0 3313 2417 793 294 58 55 chr2 10246424 10246822 -240441032 + HAL1 LINE L1 775 1173 -1334 3011 94 34 0 chr2 10246835 10247249 -240440605 - MSTA LTR MaLR 0 428 1 731 145 53 30 chr2 10247417 10247548 -240440306 - AluJo SINE Alu -178 134 1 351 368 96 18 chr2 10247652 10247872 -240439982 + HAL1b LINE L1 410 646 -702 1867 137 13 23 chr2 10247994 10248293 -240439561 + AluSx SINE Alu 1 296 -16 307 294 0 10 chr2 10248683 10248785 -240439069 + MIR SINE MIR 152 252 -10 231 247 39 52 chr2 10248948 10249025 -240438829 + L1ME4a LINE L1 5781 5856 -265 318 26 0 0 chr2 10249112 10249151 -240438703 + (CA)n Simple_repeat Simple_repeat 2 40 0 333 261 51 58 chr2 10249155 10249293 -240438561 + L1ME4a LINE L1 5984 6120 -1 300 400 20 0 chr2 10250950 10251100 -240436754 - MIR3 SINE MIR -8 200 48 255 328 172 0 chr2 10251392 10251508 -240436346 - L2 LINE L2 -4 3268 3133 279 357 60 43 chr2 10253001 10253186 -240434668 - L2 LINE L2 -5 3267 3080 856 191 36 0 chr2 10253411 10253579 -240434275 + MER5B DNA MER1_type 4 177 -1 378 250 19 37 chr2 10254107 10254215 -240433639 - MIR SINE MIR -113 149 44 226 204 0 0 chr2 10255246 10255295 -240432559 + L1MD3 LINE L1 6726 6774 -1221 1104 173 124 77 chr2 10255299 10255536 -240432318 + L1MD3 LINE L1 6846 7071 -915 252 234 31 0 chr2 10255536 10255600 -240432254 + MLT1F1 LTR MaLR 44 109 -458 1104 173 124 77 chr2 10255600 10255898 -240431956 + L1MD3 LINE L1 7071 7683 -303 709 135 18 0 chr2 10255888 10255999 -240431855 + L1M3 LINE L1 5567 5679 -501 * 186 299 168 9 chr2 10256341 10256448 -240431406 + L2 LINE L2 3146 3269 -3 317 317 123 18 chr2 10256530 10256757 -240431097 - MIR SINE MIR 0 262 12 220 250 28 65 chr2 10256850 10256958 -240430896 - L2 LINE L2 -1 3271 3168 2357 143 64 7 chr2 10257657 10258062 -240429792 + MSTA LTR MaLR 1 428 0 3588 156 0 0 chr2 10258333 10258860 -240428994 - MER1A DNA MER1_type 0 527 1 283 261 180 18 chr2 10258992 10259103 -240428751 - MIR SINE MIR -82 180 52 1984 214 23 19 chr2 10259136 10259612 -240428242 + L1MD2 LINE L1 5880 6357 -2 1941 138 7 3 chr2 10259732 10260021 -240427833 - AluJb SINE Alu -22 290 1 963 134 0 8 chr2 10260507 10260641 -240427213 + AluSx SINE Alu 1 133 -179 371 230 11 69 chr2 10260659 10260817 -240427037 - L1MC4 LINE L1 -1334 6708 6610 370 253 11 33 chr2 10260740 10260831 -240427023 + L1MC4 LINE L1 6615 6703 -1339 * 1152 127 0 0 chr2 10260834 10260992 -240426862 + AluSx SINE Alu 136 293 -19 210 250 0 0 chr2 10261021 10261077 -240426777 + (TATG)n Simple_repeat Simple_repeat 2 57 0 354 358 113 26 chr2 10261140 10261369 -240426485 + MIR SINE MIR 12 260 -2 404 285 84 45 chr2 10261458 10261637 -240426217 + MIR SINE MIR 6 191 -71 460 264 0 11 chr2 10262056 10262238 -240425616 + (TG)n Simple_repeat Simple_repeat 1 180 0 299 345 35 22 chr2 10262764 10262996 -240424858 + L1 LINE L1 3588 3822 -2324 209 326 113 43 chr2 10263591 10263732 -240424122 + MIR SINE MIR 57 207 -55 414 39 0 0 chr2 10264336 10264388 -240423466 + (CA)n Simple_repeat Simple_repeat 1 52 0 261 163 0 0 chr2 10264416 10264465 -240423389 + (TG)n Simple_repeat Simple_repeat 2 50 0 1814 118 8 0 chr2 10264567 10264812 -240423042 + AluSx SINE Alu 1 247 -65 319 280 100 25 chr2 10265042 10265242 -240422612 - L2 LINE L2 -244 3028 2814 309 291 39 69 chr2 10265827 10265992 -240421862 - MIR3 SINE MIR -6 202 43 2330 119 0 0 chr2 10265992 10266295 -240421559 + AluSx SINE Alu 1 303 -9 309 291 39 69 chr2 10266295 10266332 -240421522 - MIR3 SINE MIR -165 43 6 2408 99 0 0 chr2 10266570 10266873 -240420981 + AluSg SINE Alu 1 303 -7 241 364 8 15 chr2 10266890 10267022 -240420832 - MLT1L LTR MaLR -138 477 347 240 238 16 0 chr2 10267049 10267112 -240420742 - MLT1L LTR MaLR -384 231 168 507 245 113 25 chr2 10268353 10268635 -240419219 + MER115 DNA AcHobo 35 341 -352 629 278 85 5 chr2 10268707 10268919 -240418935 + MER115 DNA AcHobo 465 693 0 2202 109 0 0 chr2 10269523 10269825 -240418029 + AluSx SINE Alu 1 302 -10 302 376 58 19 chr2 10269894 10270099 -240417755 - MIR SINE MIR -14 248 36 340 292 9 0 chr2 10271337 10271450 -240416404 + L1MC4a LINE L1 2705 2818 -3328 281 285 82 40 chr2 10271498 10271815 -240416039 - LTR16A LTR ERVL 0 450 43 2162 270 88 21 chr2 10271894 10273391 -240414463 + L1MC4a LINE L1 4456 5399 -747 759 210 37 1 chr2 10273846 10274038 -240413816 + L1MC5 LINE L1 6637 6804 -1157 * 2825 152 21 6 chr2 10274033 10274559 -240413295 + L1M4c LINE L1 806 1339 -5045 1174 152 19 5 chr2 10274557 10274768 -240413086 + L1M4c LINE L1 2029 2242 -4142 * 5401 245 41 34 chr2 10274764 10275603 -240412251 - L1M4 LINE L1 -1265 4881 4049 6517 83 19 1 chr2 10275603 10277047 -240410807 + L1PA10 LINE L1 4731 6163 -5 5401 245 41 34 chr2 10277047 10277810 -240410044 - L1M4 LINE L1 -2097 4049 3261 1218 127 41 0 chr2 10277810 10278030 -240409824 - L1MA8 LINE L1 -5 6286 6058 5401 245 41 34 chr2 10278030 10278344 -240409510 - L1M4 LINE L1 -2885 3261 2951 303 244 69 38 chr2 10278522 10278653 -240409201 - L1M4 LINE L1 -3539 2607 2473 796 208 45 0 chr2 10278722 10278876 -240408978 - MLT1E1 LTR MaLR -23 631 471 314 68 45 0 chr2 10278869 10278913 -240408941 - MLT1E1 LTR MaLR -607 47 2 * 384 160 70 60 chr2 10278916 10279016 -240408838 - LTR16C LTR ERVL -28 463 363 336 288 131 25 chr2 10279227 10279387 -240408467 + MIR3 SINE MIR 29 205 -3 3951 30 0 8 chr2 10280008 10280478 -240407376 - L1PA4 LINE L1 0 6155 5690 383 326 89 16 chr2 10280501 10280884 -240406970 + LTR16B LTR ERVL 38 448 -16 1704 298 98 62 chr2 10281207 10281645 -240406209 + HERV16 LTR ERVL 495 916 -4080 1383 192 166 16 chr2 10281645 10282078 -240405776 - LTR54B LTR ERV1 0 498 1 1704 298 98 62 chr2 10282078 10283238 -240404616 + HERV16 LTR ERVL 916 2149 -2847 189 0 0 0 chr2 10284235 10284256 -240403598 + (T)n Simple_repeat Simple_repeat 1 21 0 2504 214 17 3 chr2 10284458 10285046 -240402808 - L1M4 LINE L1 -1448 4698 4103 314 319 83 36 chr2 10285210 10285303 -240402551 + L1M4 LINE L1 2110 2197 -3949 2018 117 3 0 chr2 10285303 10285606 -240402248 + AluSx SINE Alu 1 304 0 314 319 83 36 chr2 10285606 10286182 -240401672 + L1M4 LINE L1 2197 2812 -3334 1928 128 16 0 chr2 10286186 10286516 -240401338 + AluSx SINE Alu 1 335 0 1150 140 6 0 chr2 10287792 10287970 -240399884 + FRAM SINE Alu 1 176 0 1584 163 74 41 chr2 10288271 10288634 -240399220 + THE1C LTR MaLR 1 375 0 1922 121 3 10 chr2 10288665 10288971 -240398883 - AluSx SINE Alu -8 304 1 250 362 24 16 chr2 10289151 10289278 -240398576 - L2 LINE L2 -14 3299 3172 819 215 136 68 chr2 10289671 10289721 -240398133 - MLT2D LTR ERVL 0 414 369 420 20 0 0 chr2 10289721 10289770 -240398084 + (CA)n Simple_repeat Simple_repeat 2 50 0 327 49 0 0 chr2 10289773 10289814 -240398040 + (GA)n Simple_repeat Simple_repeat 2 42 0 819 215 136 68 chr2 10289814 10290141 -240397713 - MLT2D LTR ERVL -46 368 7 2091 126 0 0 chr2 10290299 10290601 -240397253 - AluSx SINE Alu -6 306 5 1919 130 7 3 chr2 10290775 10291075 -240396779 + AluSx SINE Alu 1 301 -11 249 215 15 62 chr2 10291394 10291459 -240396395 + MIR SINE MIR 52 113 -149 2100 96 0 0 chr2 10291507 10291787 -240396067 + AluSx SINE Alu 1 280 -32 289 206 46 15 chr2 10291787 10291918 -240395936 + GA-rich Low_complexity Low_complexity 4 138 0 239 167 0 24 chr2 10292262 10292304 -240395550 + L2 LINE L2 3254 3294 -19 2064 106 3 0 chr2 10292817 10293201 -240394653 - AluSx SINE Alu 0 385 1 2362 51 0 32 chr2 10294053 10294367 -240393487 + AluY SINE Alu 1 304 -7 1686 219 21 5 chr2 10294369 10294744 -240393110 - L1MB4 LINE L1 -22 6158 5778 203 296 102 45 chr2 10295295 10295471 -240392383 - MIR3 SINE MIR -10 198 13 2286 58 54 0 chr2 10295726 10296021 -240391833 + AluY SINE Alu 1 311 0 1223 275 72 27 chr2 10297079 10297566 -240390288 - MLT1J LTR MaLR -2 509 1 330 261 74 1 chr2 10297848 10297889 -240389965 - LTR16A1 LTR ERVL -2 455 418 1850 129 10 10 chr2 10297889 10298184 -240389670 - AluJo SINE Alu -17 295 1 330 261 74 1 chr2 10298184 10298368 -240389486 - LTR16A1 LTR ERVL -39 418 190 248 250 45 34 chr2 10299370 10299458 -240388396 + L1MC/D LINE L1 5827 5915 -1893 231 125 0 0 chr2 10299504 10299544 -240388310 + (TG)n Simple_repeat Simple_repeat 1 40 0 4095 132 7 65 chr2 10299860 10300594 -240387260 + LTR8 LTR ERV1 1 691 0 757 208 10 78 chr2 10300911 10301103 -240386751 - L1MC4a LINE L1 -1030 6778 6600 409 126 69 58 chr2 10301122 10301296 -240386558 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 1458 171 79 11 chr2 10301349 10301661 -240386193 - MER61B LTR ERV1 0 425 1 438 194 65 24 chr2 10301666 10301790 -240386064 - L1MC4 LINE L1 -1467 6575 6447 807 43 17 77 chr2 10301943 10302060 -240385794 - LTR17 LTR ERV1 -488 292 183 191 103 26 0 chr2 10302207 10302246 -240385608 + (TATAA)n Simple_repeat Simple_repeat 5 44 0 22 0 0 0 chr2 10302246 10302268 -240385586 + AT_rich Low_complexity Low_complexity 1 22 0 1881 104 23 40 chr2 10302269 10302568 -240385286 - AluSx SINE Alu -18 294 1 1101 184 27 93 chr2 10302571 10302903 -240384951 + L1MB7 LINE L1 5853 6162 -22 180 0 0 0 chr2 10303270 10303290 -240384564 + (A)n Simple_repeat Simple_repeat 1 20 0 334 335 68 27 chr2 10304667 10304930 -240382924 - MLT1L LTR MaLR -171 444 171 212 346 25 0 chr2 10305224 10305305 -240382549 + L2 LINE L2 3104 3186 -86 1257 239 101 47 chr2 10305364 10305904 -240381950 - L2 LINE L2 -21 3292 2709 686 122 19 0 chr2 10305907 10306014 -240381840 - AluSg/x SINE Alu -5 305 197 225 297 14 0 chr2 10306114 10306188 -240381666 - L1MC4 LINE L1 -630 7412 7338 423 206 112 158 chr2 10306208 10306335 -240381519 - L1MC4 LINE L1 -796 7246 7115 2268 83 7 0 chr2 10306335 10306636 -240381218 + AluSq SINE Alu 1 303 -10 423 206 112 158 chr2 10306636 10306920 -240380934 - L1MC4 LINE L1 -927 7115 6854 2236 87 3 7 chr2 10306952 10307251 -240380603 + AluSp SINE Alu 1 298 -15 247 283 76 11 chr2 10308145 10308237 -240379617 + L2 LINE L2 3216 3313 0 1425 181 71 0 chr2 10308266 10308398 -240379456 + AluJo SINE Alu 1 122 -190 2024 94 7 7 chr2 10308398 10308705 -240379149 + AluSp SINE Alu 1 313 0 1425 181 71 0 chr2 10308705 10308853 -240379001 + AluJo SINE Alu 122 301 -11 264 88 53 0 chr2 10309789 10309846 -240378008 + CT-rich Low_complexity Low_complexity 1 60 0 278 293 40 0 chr2 10309846 10309921 -240377933 - L2 LINE L2 -1 3312 3235 1133 179 0 0 chr2 10310308 10310509 -240377345 - L1M3 LINE L1 -1002 5144 4944 2104 157 46 14 chr2 10310517 10311027 -240376827 + L1M3 LINE L1 5157 5685 -483 3087 193 28 14 chr2 10311140 10312296 -240375558 - L1MB7 LINE L1 -317 5867 4697 311 220 59 25 chr2 10312296 10312414 -240375440 + MER65B LTR ERV1 1 122 -409 2099 110 10 0 chr2 10312510 10312818 -240375036 - AluY SINE Alu 0 311 1 252 275 22 33 chr2 10313885 10313976 -240373878 - MIR3 SINE MIR -15 193 104 264 289 132 8 chr2 10313978 10314099 -240373755 + MIR SINE MIR 23 158 -104 2060 133 0 0 chr2 10315020 10315321 -240372533 + AluSx SINE Alu 1 301 -11 441 54 0 0 chr2 10315379 10315435 -240372419 + (TGGGGG)n Simple_repeat Simple_repeat 1 56 0 428 230 151 7 chr2 10315474 10315612 -240372242 + MIR SINE MIR 7 164 -98 767 196 10 85 chr2 10315612 10315728 -240372126 + MER5A DNA MER1_type 1 97 -92 648 216 132 0 chr2 10315728 10315895 -240371959 - MER53 DNA DNA 0 189 1 767 196 10 85 chr2 10315895 10315977 -240371877 + MER5A DNA MER1_type 97 184 -5 199 281 31 0 chr2 10317223 10317287 -240370567 + MIR SINE MIR 43 108 -100 1142 115 4 9 chr2 10317478 10317703 -240370151 + (GGAA)n Simple_repeat Simple_repeat 2 225 0 973 144 6 6 chr2 10317708 10317888 -240369966 + GA-rich Low_complexity Low_complexity 1 180 0 760 104 0 43 chr2 10318037 10318319 -240369535 + (TTCC)n Simple_repeat Simple_repeat 1 269 0 349 309 71 18 chr2 10318419 10318587 -240369267 - L3 LINE CR1 -241 1336 1160 886 53 0 0 chr2 10319248 10319362 -240368492 - AluY SINE Alu -11 300 187 468 279 111 38 chr2 10319362 10319639 -240368215 - L1MEc LINE L1 -3670 2545 2281 367 242 43 93 chr2 10319791 10319828 -240368026 - L1MC/D LINE L1 -2027 5781 5744 2298 80 3 7 chr2 10319828 10320130 -240367724 - AluSq SINE Alu -12 301 1 367 242 43 93 chr2 10320130 10320253 -240367601 - L1MC/D LINE L1 -2064 5744 5629 990 252 65 37 chr2 10320268 10320627 -240367227 + MLT1G3 LTR MaLR 1 336 -194 2329 205 69 0 chr2 10320691 10321183 -240366671 + MER68 LTR ERV1 36 561 -1 343 300 106 24 chr2 10321292 10321462 -240366392 + L1ME LINE L1 5604 5787 -334 808 136 30 8 chr2 10321506 10321638 -240366216 + FRAM SINE Alu 18 152 -24 1945 128 4 0 chr2 10321699 10322007 -240365847 + AluSx SINE Alu 1 309 0 255 185 46 0 chr2 10322812 10322877 -240364977 - MIR SINE MIR -108 100 33 317 197 39 110 chr2 10323052 10323179 -240364675 - L1MC4 LINE L1 -1 8041 7924 22 35 0 0 chr2 10323220 10323249 -240364605 + AT_rich Low_complexity Low_complexity 1 29 0 2220 102 0 10 chr2 10323258 10323562 -240364292 + AluSx SINE Alu 1 301 -11 969 189 71 20 chr2 10324098 10324294 -240363560 + MIR SINE MIR 1 206 -56 222 269 84 50 chr2 10324390 10324509 -240363345 + MIR SINE MIR 22 144 -64 546 273 105 56 chr2 10324638 10324924 -240362930 - MLT1J2 LTR MaLR -114 336 37 996 267 55 46 chr2 10325020 10325064 -240362790 + MLT1D LTR MaLR 158 200 -305 1571 192 0 45 chr2 10325064 10325192 -240362662 + AluJo SINE Alu 19 151 -161 2060 125 3 3 chr2 10325192 10325495 -240362359 + AluSp SINE Alu 1 303 -10 1571 192 0 45 chr2 10325495 10325674 -240362180 + AluJo SINE Alu 151 312 0 996 267 55 46 chr2 10325674 10325974 -240361880 + MLT1D LTR MaLR 200 505 0 351 254 114 0 chr2 10325982 10326096 -240361758 - MIR SINE MIR -127 135 9 1266 226 59 98 chr2 10326910 10327433 -240360421 - L1ME3A LINE L1 -4 6166 5664 1721 138 62 7 chr2 10327473 10327763 -240360091 + AluJb SINE Alu 1 306 -6 2383 85 0 0 chr2 10328187 10328493 -240359361 - AluSp SINE Alu -7 306 1 702 149 79 0 chr2 10328661 10328775 -240359079 - FLAM_C SINE Alu -19 124 2 1167 144 6 0 chr2 10329491 10329671 -240358183 + FRAM SINE Alu 1 176 0 1648 163 74 41 chr2 10329972 10330335 -240357519 + THE1C LTR MaLR 1 375 0 1892 142 7 3 chr2 10330366 10330669 -240357185 - AluSx SINE Alu -8 304 1 264 77 0 0 chr2 10330696 10330735 -240357119 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 191 114 29 0 chr2 10330738 10330773 -240357081 + A-rich Low_complexity Low_complexity 2 37 0 443 317 93 0 chr2 10330897 10331058 -240356796 + MIR SINE MIR 80 255 -7 332 349 15 8 chr2 10331841 10331973 -240355881 + MIR SINE MIR 78 210 -52 244 209 60 30 chr2 10332523 10332590 -240355264 - L2 LINE L2 -58 3255 3187 255 317 72 6 chr2 10335149 10335316 -240352538 - LTR16A LTR ERVL -152 298 121 363 181 14 0 chr2 10336165 10336237 -240351617 - MLT1J2 LTR MaLR -394 73 1 * 622 242 121 26 chr2 10336237 10336508 -240351346 + LTR16A LTR ERVL 154 450 0 2245 97 10 0 chr2 10337862 10338161 -240349693 + AluSx SINE Alu 1 302 -10 1402 161 47 67 chr2 10338237 10338536 -240349318 + AluJo SINE Alu 1 293 -19 2078 117 10 0 chr2 10338602 10338893 -240348961 - AluSg SINE Alu -16 294 1 212 237 0 0 chr2 10339092 10339130 -240348724 + polypurine Low_complexity Low_complexity 3 40 0 464 304 25 0 chr2 10339422 10339583 -240348271 + L1MEd LINE L1 4 168 -5951 1396 282 74 11 chr2 10339594 10340041 -240347813 + L1MEd LINE L1 206 680 -5439 2104 129 0 7 chr2 10340066 10340375 -240347479 + AluSx SINE Alu 1 307 -5 571 197 19 163 chr2 10340377 10340431 -240347423 - MIR SINE MIR -10 252 192 2182 117 3 0 chr2 10340431 10340740 -240347114 + AluSq SINE Alu 1 310 -3 571 197 19 163 chr2 10340740 10340949 -240346905 - MIR SINE MIR -70 192 27 233 270 24 75 chr2 10340992 10341151 -240346703 + L1MEd LINE L1 780 915 -5204 1129 158 6 0 chr2 10341151 10341322 -240346532 + FAM SINE Alu 1 172 -3 233 270 24 75 chr2 10341322 10341495 -240346359 + L1MEd LINE L1 915 1095 -5024 2322 97 0 0 chr2 10341496 10341804 -240346050 + AluSc SINE Alu 1 308 -1 270 304 59 59 chr2 10341887 10342331 -240345523 + L1MEd LINE L1 1231 1674 -4455 2194 108 7 0 chr2 10342620 10342925 -240344929 + AluSx SINE Alu 1 307 -5 262 375 155 0 chr2 10342947 10343115 -240344739 - L2 LINE L2 -464 2850 2657 193 274 0 0 chr2 10343391 10343442 -240344412 + L2 LINE L2 3262 3312 -1 297 345 96 10 chr2 10344510 10344707 -240343147 + MIR SINE MIR 20 233 -29 2299 94 0 3 chr2 10345031 10345338 -240342516 - AluSq SINE Alu -7 306 1 2933 54 6 0 chr2 10345338 10345689 -240342165 - THE1A LTR MaLR -2 353 1 300 285 15 85 chr2 10345750 10345813 -240342041 + MIR SINE MIR 102 153 -109 1433 217 64 87 chr2 10345813 10346342 -240341512 - MLT2B1 LTR ERVL 0 520 4 300 285 15 85 chr2 10346342 10346408 -240341446 + MIR SINE MIR 153 222 -40 1769 167 3 10 chr2 10346560 10346866 -240340988 + AluJo SINE Alu 1 304 -8 2200 109 3 0 chr2 10346866 10347168 -240340686 + AluSx SINE Alu 1 303 -9 227 308 185 0 chr2 10347992 10348122 -240339732 - L3 LINE CR1 -2 1575 1422 464 273 116 12 chr2 10348315 10348487 -240339367 + MIR SINE MIR 28 217 -45 3966 97 39 2 chr2 10349140 10349674 -240338180 - MER41A LTR ERV1 0 554 1 293 210 86 25 chr2 10350166 10350247 -240337607 - MIR SINE MIR 0 262 177 404 247 78 48 chr2 10352327 10352493 -240335361 + MIR SINE MIR 21 191 -71 1901 134 0 20 chr2 10352529 10352828 -240335026 - AluSx SINE Alu -19 293 1 2455 192 22 2 chr2 10352886 10353344 -240334510 + MLT1C LTR MaLR 1 467 0 1611 164 24 7 chr2 10353410 10353702 -240334152 + AluJo SINE Alu 1 297 -15 261 246 0 15 chr2 10353705 10353770 -240334084 - MIR SINE MIR -124 84 21 1571 167 4 4 chr2 10353811 10354068 -240333786 + AluJo SINE Alu 1 257 -55 298 120 0 0 chr2 10354193 10354243 -240333611 + AluJo SINE Alu 249 298 -4 1925 82 86 0 chr2 10354283 10354551 -240333303 - AluSq SINE Alu -16 297 7 335 283 88 2 chr2 10355095 10355233 -240332621 + MIR SINE MIR 36 182 -61 3113 172 27 98 chr2 10355713 10356296 -240331558 + LTR8 LTR ERV1 1 521 -170 1924 107 7 14 chr2 10356296 10356576 -240331278 + AluSx SINE Alu 5 284 -28 207 0 0 0 chr2 10356576 10356599 -240331255 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 3113 172 27 98 chr2 10356607 10356767 -240331087 + LTR8 LTR ERV1 521 691 0 4016 78 73 84 chr2 10356881 10357551 -240330303 - MER4A LTR ERV1 -1 663 1 2252 91 3 0 chr2 10357596 10357894 -240329960 + AluSx SINE Alu 3 301 -11 2024 113 23 7 chr2 10357987 10358287 -240329567 + AluSg SINE Alu 1 305 -5 274 181 38 114 chr2 10358430 10358475 -240329379 - L1MC4 LINE L1 -433 7609 7562 1618 184 0 46 chr2 10358475 10358801 -240329053 - AluJb SINE Alu 0 312 2 274 181 38 114 chr2 10358801 10358860 -240328994 - L1MC4 LINE L1 -480 7562 7513 210 139 28 46 chr2 10358966 10359074 -240328780 + (CGGGG)n Simple_repeat Simple_repeat 2 107 0 266 96 19 58 chr2 10359705 10359757 -240328097 + MIR3 SINE MIR 108 157 -51 1026 129 165 52 chr2 10359767 10360039 -240327815 - LTR48 LTR ERV1 -484 303 1 1991 99 12 46 chr2 10361873 10362018 -240325836 + AluSx SINE Alu 1 149 -163 2382 61 0 0 chr2 10362018 10362311 -240325543 + AluY SINE Alu 1 293 -18 1991 99 12 46 chr2 10362311 10362488 -240325366 + AluSx SINE Alu 149 312 0 225 289 0 62 chr2 10362646 10362743 -240325111 + MIR3 SINE MIR 111 201 -7 180 0 0 0 chr2 10364437 10364457 -240323397 + (A)n Simple_repeat Simple_repeat 1 20 0 1157 126 8 89 chr2 10364900 10365146 -240322708 - AluJo SINE Alu 0 312 87 1632 194 0 7 chr2 10365162 10365456 -240322398 - AluJo SINE Alu -20 292 1 220 269 134 0 chr2 10365687 10365754 -240322100 + MIR SINE MIR 113 188 -74 1176 93 11 6 chr2 10366229 10366441 -240321413 - AluY SINE Alu 0 312 100 2203 64 4 0 chr2 10366696 10367007 -240320847 - AluY SINE Alu 0 312 1 874 217 0 38 chr2 10367059 10367243 -240320611 + AluJo SINE Alu 2 178 -134 443 158 0 0 chr2 10367244 10367320 -240320534 - MER53 DNA DNA -113 76 1 275 292 4 17 chr2 10367570 10367708 -240320146 - MIR SINE MIR -43 219 85 186 71 0 0 chr2 10368420 10368448 -240319406 + (TA)n Simple_repeat Simple_repeat 2 29 0 2063 84 0 119 chr2 10368448 10368637 -240319217 - AluSp SINE Alu -8 295 85 9741 41 8 103 chr2 10368637 10370111 -240317743 - SVA Other Other 0 1386 53 180 0 0 0 chr2 10370111 10370131 -240317723 + (GGGAGA)n Simple_repeat Simple_repeat 3 22 0 2063 84 0 119 chr2 10370131 10370275 -240317579 - AluSp SINE Alu -216 87 1 566 168 0 99 chr2 10370657 10370715 -240317139 - MER53 DNA DNA -44 145 83 1978 108 3 17 chr2 10370715 10371011 -240316843 + AluSx SINE Alu 6 297 -15 566 168 0 99 chr2 10371011 10371113 -240316741 - MER53 DNA DNA -106 83 1 2236 100 7 0 chr2 10371268 10371567 -240316287 + AluSx SINE Alu 5 305 -7 2300 70 7 17 chr2 10372100 10372398 -240315456 + AluY SINE Alu 1 295 -16 322 331 0 0 chr2 10373102 10373259 -240314595 + C-rich Low_complexity Low_complexity 1 157 0 2396 70 0 7 chr2 10373648 10373946 -240313908 - AluY SINE Alu -15 296 1 1244 148 148 61 chr2 10374805 10374955 -240312899 - AluJo SINE Alu -11 301 165 2353 84 0 0 chr2 10374955 10375241 -240312613 - AluSx SINE Alu -26 286 1 1244 148 148 61 chr2 10375241 10375367 -240312487 - AluJo SINE Alu -147 165 1 432 164 218 0 chr2 10375368 10375478 -240312376 - L1 LINE L1 -780 5366 5233 271 274 27 14 chr2 10375952 10376025 -240311829 + MIR3 SINE MIR 90 163 -45 2215 107 0 10 chr2 10376034 10376334 -240311520 - AluSg SINE Alu -13 297 1 1706 95 0 17 chr2 10376568 10376823 -240311031 - AluSx SINE Alu 0 307 57 26 30 0 0 chr2 10376912 10376945 -240310909 + AT_rich Low_complexity Low_complexity 1 33 0 2431 82 0 0 chr2 10378290 10378594 -240309260 - AluSx SINE Alu -8 304 1 2832 0 0 0 chr2 10378604 10378906 -240308948 - AluYa5 SINE Alu -9 302 1 26 0 0 0 chr2 10379043 10379069 -240308785 + AT_rich Low_complexity Low_complexity 1 26 0 2062 122 10 0 chr2 10379256 10379552 -240308302 + AluSx SINE Alu 1 299 -13 492 238 109 12 chr2 10381319 10381489 -240306365 - MIR SINE MIR -47 215 33 30 0 0 0 chr2 10381856 10381886 -240305968 + AT_rich Low_complexity Low_complexity 1 30 0 261 0 0 0 chr2 10383260 10383289 -240304565 + (TA)n Simple_repeat Simple_repeat 2 30 0 30 45 0 0 chr2 10383385 10383429 -240304425 + AT_rich Low_complexity Low_complexity 1 44 0 2203 110 3 0 chr2 10383710 10384011 -240303843 - AluSx SINE Alu -10 302 1 240 143 0 0 chr2 10385031 10385073 -240302781 + (TA)n Simple_repeat Simple_repeat 1 42 0 225 132 0 0 chr2 10386771 10386809 -240301045 + (CAT)n Simple_repeat Simple_repeat 1 38 0 190 212 0 0 chr2 10387056 10387089 -240300765 - L3 LINE CR1 -310 1267 1235 2291 95 0 7 chr2 10387525 10387858 -240299996 + AluSq SINE Alu 1 313 0 272 271 212 33 chr2 10387989 10388140 -240299714 - MER5A DNA MER1_type -11 178 1 1220 205 86 4 chr2 10389248 10389492 -240298362 + Tigger7 DNA MER2_type 1 264 -2223 554 165 10 21 chr2 10389495 10389592 -240298262 + Tigger7 DNA MER2_type 2392 2487 0 2410 78 3 0 chr2 10390182 10390488 -240297366 - AluSx SINE Alu -5 307 1 2252 58 7 4 chr2 10390692 10390970 -240296884 - AluY SINE Alu 0 311 33 956 177 0 6 chr2 10390980 10391144 -240296710 + AluSg/x SINE Alu 149 311 -1 292 350 37 37 chr2 10391560 10391777 -240296077 - L3 LINE CR1 -286 1291 1075 1718 142 0 44 chr2 10391778 10392096 -240295758 + AluJo SINE Alu 1 305 0 22 0 0 0 chr2 10392439 10392461 -240295393 + AT_rich Low_complexity Low_complexity 1 22 0 1108 181 24 0 chr2 10393758 10393963 -240293891 - MER6B DNA MER2_type 0 210 1 26 64 0 0 chr2 10396574 10396621 -240291233 + AT_rich Low_complexity Low_complexity 1 47 0 189 0 0 0 chr2 10396986 10397007 -240290847 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 31 44 0 0 chr2 10397164 10397209 -240290645 + AT_rich Low_complexity Low_complexity 1 45 0 2075 149 0 0 chr2 10397584 10397893 -240289961 - AluSx SINE Alu -3 309 1 318 317 90 0 chr2 10398099 10398244 -240289610 - MIR SINE MIR 0 262 105 31 44 0 0 chr2 10399786 10399831 -240288023 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 10400013 10400035 -240287819 + AT_rich Low_complexity Low_complexity 1 22 0 2111 95 3 71 chr2 10400957 10401283 -240286571 - AluSx SINE Alu -8 304 1 1634 165 0 55 chr2 10401382 10401710 -240286144 - AluJb SINE Alu -2 310 1 339 289 161 55 chr2 10401822 10402191 -240285663 - L1M3 LINE L1 -400 5783 5373 236 325 0 0 chr2 10402238 10402321 -240285533 - L1M3 LINE L1 -852 5294 5212 267 302 87 12 chr2 10402340 10402512 -240285342 - L1M3 LINE L1 -1075 5071 4887 294 216 91 23 chr2 10403289 10403377 -240284477 - L2 LINE L2 0 3313 3220 810 218 60 30 chr2 10404253 10404487 -240283367 + Charlie1 DNA MER1_type 2 242 -2519 394 206 0 11 chr2 10404470 10404562 -240283292 + Charlie1 DNA MER1_type 2622 2712 -49 * 23 0 0 0 chr2 10404562 10404585 -240283269 + AT_rich Low_complexity Low_complexity 1 23 0 2428 59 3 0 chr2 10404585 10404875 -240282979 - AluY SINE Alu -19 292 2 267 95 0 48 chr2 10404880 10404922 -240282932 + Charlie1 DNA MER1_type 2703 2742 -19 466 243 70 61 chr2 10405019 10405208 -240282646 + L1ME3A LINE L1 5977 6169 -1 320 316 86 0 chr2 10405365 10405517 -240282337 + L1ME4a LINE L1 5861 6025 -96 769 289 85 61 chr2 10406472 10407129 -240280725 - HAL1 LINE L1 -1091 1416 744 200 345 48 36 chr2 10407757 10407841 -240280013 + L2 LINE L2 3157 3241 -31 2093 136 0 0 chr2 10407907 10408202 -240279652 + AluSq SINE Alu 1 295 -18 210 245 0 0 chr2 10408782 10408831 -240279023 + (TAG)n Simple_repeat Simple_repeat 1 49 0 490 315 55 15 chr2 10408856 10409056 -240278798 - MIR SINE MIR -54 208 1 684 270 25 0 chr2 10409167 10409330 -240278524 - FAM SINE Alu -4 171 5 44 75 0 0 chr2 10410119 10410212 -240277642 + AT_rich Low_complexity Low_complexity 1 93 0 2057 137 19 3 chr2 10410666 10410973 -240276881 - AluSx SINE Alu 0 312 1 744 235 155 0 chr2 10411288 10411501 -240276353 + MIR SINE MIR 14 259 -3 242 213 43 32 chr2 10411607 10411701 -240276153 + L1ME4a LINE L1 6021 6115 -6 504 222 117 37 chr2 10411959 10412121 -240275733 - MIR SINE MIR -46 216 42 1795 149 0 67 chr2 10412405 10412721 -240275133 - AluJo SINE Alu -17 295 1 971 182 6 6 chr2 10413988 10414153 -240273701 - AluJb SINE Alu -15 297 133 616 341 127 25 chr2 10416775 10417428 -240270426 + L2 LINE L2 2167 2886 -428 902 135 0 118 chr2 10420296 10420474 -240267380 - AluSg/x SINE Alu -19 291 135 1124 102 0 107 chr2 10420490 10420686 -240267168 - AluSg/x SINE Alu -1 311 137 2341 104 0 0 chr2 10420704 10421012 -240266842 - AluSg1 SINE Alu -1 308 1 22 35 0 0 chr2 10421038 10421067 -240266787 + AT_rich Low_complexity Low_complexity 1 29 0 333 335 47 34 chr2 10421844 10422031 -240265823 - MIR SINE MIR -50 212 20 23 54 0 0 chr2 10422237 10422274 -240265580 + AT_rich Low_complexity Low_complexity 1 37 0 1880 127 0 41 chr2 10423207 10423499 -240264355 + AluSx SINE Alu 1 280 -32 186 71 0 0 chr2 10423499 10423527 -240264327 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 490 131 155 0 chr2 10423639 10423723 -240264131 - FRAM SINE Alu -13 163 67 1548 181 71 0 chr2 10423858 10424006 -240263848 - AluJo SINE Alu -11 301 165 2146 91 7 7 chr2 10424006 10424313 -240263541 - AluSp SINE Alu 0 313 1 1548 181 71 0 chr2 10424313 10424445 -240263409 - AluJo SINE Alu -147 165 1 237 283 76 11 chr2 10424474 10424566 -240263288 - L2 LINE L2 0 3313 3216 21 57 0 0 chr2 10425414 10425449 -240262405 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr2 10426197 10426224 -240261630 + AT_rich Low_complexity Low_complexity 1 27 0 247 333 154 0 chr2 10427332 10427494 -240260360 + L1ME LINE L1 5533 5719 -402 300 307 10 53 chr2 10427523 10427654 -240260200 - MIR3 SINE MIR -8 200 72 21 0 0 0 chr2 10428720 10428741 -240259113 + AT_rich Low_complexity Low_complexity 1 21 0 556 238 92 6 chr2 10428859 10429023 -240258831 - MER3 DNA MER1_type -4 205 28 278 250 129 40 chr2 10429056 10429180 -240258674 - MIR SINE MIR -55 153 19 53 49 0 0 chr2 10429421 10429502 -240258352 + AT_rich Low_complexity Low_complexity 1 81 0 563 177 80 0 chr2 10429517 10429630 -240258224 - FLAM_A SINE Alu -11 122 1 1913 169 7 3 chr2 10430630 10430938 -240256916 + AluJb SINE Alu 1 309 -3 195 114 0 0 chr2 10432763 10432798 -240255056 + (CA)n Simple_repeat Simple_repeat 2 36 0 1955 255 24 38 chr2 10433376 10434402 -240253452 + L1MC4 LINE L1 5975 7009 -1033 195 393 28 28 chr2 10434516 10434694 -240253160 - L2 LINE L2 -461 2853 2676 2130 118 3 34 chr2 10435185 10435507 -240252347 - AluSx SINE Alu 0 312 1 572 248 85 0 chr2 10435932 10436085 -240251769 - MER58C DNA MER1_type -6 209 44 1916 146 0 17 chr2 10436126 10436428 -240251426 - AluSx SINE Alu -15 297 1 323 286 150 0 chr2 10436782 10436915 -240250939 + L1ME LINE L1 5258 5410 -949 1830 171 3 3 chr2 10436931 10437229 -240250625 + AluJo SINE Alu 1 298 -14 267 325 96 30 chr2 10437307 10437673 -240250181 + L1ME LINE L1 5440 5810 -311 731 122 0 0 chr2 10437987 10438094 -240249760 + U6 snRNA snRNA 1 107 0 208 27 54 27 chr2 10438103 10438140 -240249714 + (TAAAAA)n Simple_repeat Simple_repeat 1 38 0 2279 101 0 3 chr2 10440870 10441168 -240246686 + AluSq SINE Alu 3 299 -14 291 172 69 0 chr2 10441365 10441423 -240246431 + Alu SINE Alu 224 285 -16 238 134 0 61 chr2 10441436 10441518 -240246336 + (GGA)n Simple_repeat Simple_repeat 3 79 0 2122 112 7 3 chr2 10442095 10442400 -240245454 + AluSg SINE Alu 1 306 -4 1072 132 19 13 chr2 10442443 10442602 -240245252 + FRAM SINE Alu 1 156 -20 25 0 0 0 chr2 10442604 10442629 -240245225 + AT_rich Low_complexity Low_complexity 1 25 0 2259 99 3 3 chr2 10443579 10443882 -240243972 - AluSg SINE Alu -7 303 1 1516 203 62 10 chr2 10444932 10445106 -240242748 - L1MB8 LINE L1 -1 6177 6004 773 246 229 8 chr2 10445106 10445464 -240242390 - L1MC3 LINE L1 -1801 5984 5548 353 212 41 82 chr2 10446460 10446606 -240241248 + MIR3 SINE MIR 15 154 -54 405 0 0 0 chr2 10447047 10447092 -240240762 + (CA)n Simple_repeat Simple_repeat 1 45 0 336 305 110 21 chr2 10448202 10448466 -240239388 - L2 LINE L2 -264 3049 2687 2339 186 87 25 chr2 10448468 10448858 -240238996 - L1MB1 LINE L1 -101 6067 5626 2102 151 107 8 chr2 10448858 10449054 -240238800 - MSTB LTR MaLR -4 422 247 186 71 0 0 chr2 10449054 10449082 -240238772 + (CAGAGA)n Simple_repeat Simple_repeat 2 29 0 2102 151 107 8 chr2 10449082 10449268 -240238586 - MSTB LTR MaLR -179 247 2 2339 186 87 25 chr2 10449268 10449478 -240238376 - L1MB1 LINE L1 -542 5626 5430 1519 115 0 0 chr2 10449478 10449698 -240238156 - AluSg/x SINE Alu 0 301 82 802 149 11 92 chr2 10449707 10449881 -240237973 - FRAM SINE Alu -7 169 10 1542 174 7 5 chr2 10449890 10450344 -240237510 - L1MB1 LINE L1 -727 5441 4933 452 141 0 0 chr2 10450342 10450420 -240237434 + L1 LINE L1 5159 5236 -910 * 219 298 58 29 chr2 10450492 10450596 -240237258 - L2 LINE L2 -939 2375 2269 844 158 30 0 chr2 10450660 10450824 -240237030 + L1MB7 LINE L1 5997 6165 -19 325 206 14 0 chr2 10451056 10451129 -240236725 - Charlie5 DNA MER1_type -27 2585 2512 2260 120 0 3 chr2 10451139 10451447 -240236407 + AluSx SINE Alu 1 307 -5 253 301 118 16 chr2 10451519 10451705 -240236149 + L1MEd LINE L1 1022 1226 -4893 * 907 243 125 75 chr2 10451701 10451882 -240235972 + HAL1 LINE L1 1692 1863 -644 2508 62 3 0 chr2 10451882 10452191 -240235663 - AluY SINE Alu 0 311 2 907 243 125 75 chr2 10452191 10452591 -240235263 + HAL1 LINE L1 1863 2320 -187 2632 106 21 35 chr2 10452591 10452956 -240234898 + MSTA LTR MaLR 2 362 -66 2391 93 0 0 chr2 10452956 10453266 -240234588 - AluSx SINE Alu -2 310 1 2632 106 21 35 chr2 10453266 10453333 -240234521 + MSTA LTR MaLR 362 428 0 907 243 125 75 chr2 10453333 10453495 -240234359 + HAL1 LINE L1 2320 2473 -34 2323 116 0 0 chr2 10453853 10454154 -240233700 + AluSx SINE Alu 1 301 -11 2303 67 7 17 chr2 10454154 10454452 -240233402 + AluY SINE Alu 1 295 -16 2109 135 0 0 chr2 10455016 10455313 -240232541 - AluSx SINE Alu -15 297 1 368 277 80 0 chr2 10455419 10455556 -240232298 - L2 LINE L2 0 3313 3166 * 863 246 304 25 chr2 10455552 10455984 -240231870 + L2 LINE L2 1876 2186 -1128 2392 98 3 0 chr2 10455984 10456290 -240231564 - AluSc SINE Alu -2 307 1 863 246 304 25 chr2 10456290 10456496 -240231358 + L2 LINE L2 2186 2692 -622 2255 101 0 7 chr2 10456747 10457043 -240230811 - AluSg SINE Alu -16 294 1 3284 175 52 110 chr2 10457402 10458325 -240229529 + L1MC/D LINE L1 3887 4863 -1470 1858 167 0 7 chr2 10458325 10458630 -240229224 + AluJo SINE Alu 1 303 -9 3284 175 52 110 chr2 10458630 10459241 -240228613 + L1MC/D LINE L1 4863 5508 -825 2168 99 17 3 chr2 10459241 10459533 -240228321 + AluSx SINE Alu 1 296 -16 2802 22 0 3 chr2 10459535 10459854 -240228000 + AluYb8 SINE Alu 1 318 0 3284 175 52 110 chr2 10459854 10460311 -240227543 + L1MC/D LINE L1 5509 5792 -541 887 173 71 74 chr2 10460434 10460643 -240227211 - L1MC2 LINE L1 -176 6168 5959 3116 127 12 0 chr2 10460643 10461130 -240226724 - L1PB1 LINE L1 -13 6138 5646 887 173 71 74 chr2 10461130 10461243 -240226611 - L1MC2 LINE L1 -385 5959 5847 3404 143 51 22 chr2 10461249 10461904 -240225950 - L1MA8 LINE L1 0 6291 5614 2133 128 0 3 chr2 10461904 10462209 -240225645 - AluSx SINE Alu -8 304 1 3404 143 51 22 chr2 10462209 10462238 -240225616 - L1MA8 LINE L1 -677 5614 5587 2808 211 14 24 chr2 10462238 10463285 -240224569 + L1MCa LINE L1 2191 3227 -3199 253 115 39 19 chr2 10463478 10463530 -240224324 - MLT1A1 LTR MaLR -312 53 1 327 270 40 24 chr2 10463545 10463776 -240224078 - L1 LINE L1 -1155 4991 4757 486 286 38 54 chr2 10463783 10464098 -240223756 - L1MEc LINE L1 -5014 1382 1073 * 551 231 48 16 chr2 10464095 10464281 -240223573 - L1ME1 LINE L1 -274 5892 5701 1489 243 23 0 chr2 10464514 10464901 -240222953 - L1MB7 LINE L1 -2 6182 5787 1539 252 94 73 chr2 10464901 10465624 -240222230 + MER21B LTR ERV1 1 738 -125 985 224 127 26 chr2 10465632 10465988 -240221866 - L1MB7 LINE L1 -376 5786 5402 2787 205 20 29 chr2 10465994 10466471 -240221383 - L1MB7 LINE L1 -904 5242 4773 1615 169 11 7 chr2 10466471 10466743 -240221111 - AluJo SINE Alu -39 273 1 2787 205 20 29 chr2 10466743 10467032 -240220822 - L1MB7 LINE L1 -1373 4773 4483 332 22 22 0 chr2 10467054 10467099 -240220755 + (CA)n Simple_repeat Simple_repeat 2 47 0 1964 101 4 14 chr2 10467238 10467516 -240220338 - AluSx SINE Alu -37 275 1 311 235 101 27 chr2 10467619 10467768 -240220086 - HAL1 LINE L1 -920 1587 1428 2233 116 0 13 chr2 10468140 10468443 -240219411 - AluSq SINE Alu -14 299 1 294 210 0 0 chr2 10468477 10468539 -240219315 + MLT1A1 LTR MaLR 108 169 -221 677 236 40 0 chr2 10469049 10469223 -240218631 + MLT1A1 LTR MaLR 170 350 -15 276 280 0 0 chr2 10469760 10469853 -240218001 + LTR58 LTR ERV1 350 442 -237 537 201 62 7 chr2 10469952 10470096 -240217758 + LTR35 LTR ERV1 467 618 0 397 208 247 6 chr2 10470154 10470332 -240217522 + L1MC4 LINE L1 7559 7779 -263 700 188 130 39 chr2 10470332 10470540 -240217314 + Cheshire DNA MER1_type 1803 2029 -391 2050 158 98 15 chr2 10470540 10471006 -240216848 + L1MC3 LINE L1 6249 6316 -17 1675 179 77 3 chr2 10471007 10471386 -240216468 + Cheshire DNA MER1_type 2014 2420 0 440 165 9 35 chr2 10471388 10471503 -240216351 + L1MC5 LINE L1 7806 7917 -44 1642 173 26 29 chr2 10471533 10471839 -240216015 + AluJo SINE Alu 1 305 -7 263 266 15 38 chr2 10471899 10472105 -240215749 + L1MC5 LINE L1 3580 3779 -2367 68 24 0 0 chr2 10472259 10472341 -240215513 + AT_rich Low_complexity Low_complexity 1 82 0 527 313 36 27 chr2 10472353 10472688 -240215166 + L1MC5 LINE L1 5354 5691 -2117 297 218 142 120 chr2 10472763 10472988 -240214866 + L1MC5 LINE L1 6828 7057 -904 628 232 35 51 chr2 10473100 10473354 -240214500 + L1MC5 LINE L1 7169 7418 -543 2095 206 27 29 chr2 10473858 10474381 -240213473 + L1MB7 LINE L1 5595 6116 -68 918 219 158 50 chr2 10474891 10475348 -240212506 + Charlie7 DNA MER1_type 2090 2595 -17 2332 96 0 3 chr2 10475533 10475835 -240212019 + AluSq SINE Alu 2 302 -11 1333 97 11 5 chr2 10475957 10476142 -240211712 - AluSq SINE Alu -127 186 1 233 297 36 9 chr2 10476209 10476320 -240211534 + L2 LINE L2 2624 2737 -577 952 103 82 0 chr2 10476345 10476491 -240211363 - AluSg/x SINE Alu -1 311 154 1424 181 15 39 chr2 10476616 10476953 -240210901 + MER33 DNA MER1_type 1 319 -5 22 0 0 0 chr2 10477103 10477125 -240210729 + AT_rich Low_complexity Low_complexity 1 22 0 3140 252 99 68 chr2 10477388 10478839 -240209015 + L2 LINE L2 1426 2922 -392 1429 217 39 39 chr2 10479018 10479130 -240208724 + L1MC4 LINE L1 6528 6639 -1403 2245 108 0 10 chr2 10479130 10479436 -240208418 + AluSx SINE Alu 1 303 -9 1429 217 39 39 chr2 10479436 10479481 -240208373 + L1MC4 LINE L1 6639 6683 -1359 306 0 0 0 chr2 10479481 10479515 -240208339 + (CA)n Simple_repeat Simple_repeat 2 35 0 1429 217 39 39 chr2 10479515 10479743 -240208111 + L1MC4 LINE L1 6682 6914 -1128 597 193 62 0 chr2 10479777 10479922 -240207932 + L1MD3 LINE L1 7834 7987 -8 530 170 38 0 chr2 10479927 10480033 -240207821 + L1MC4 LINE L1 6898 7007 -1035 * 734 202 118 11 chr2 10480010 10480188 -240207666 + L1MC4 LINE L1 7525 7721 -321 622 267 163 48 chr2 10480239 10480613 -240207241 + L2 LINE L2 2897 3313 0 2354 84 0 0 chr2 10481350 10481648 -240206206 - AluSc SINE Alu -11 298 1 866 158 13 19 chr2 10481743 10481901 -240205953 - MER2 DNA MER2_type -1 344 188 1187 174 0 0 chr2 10483226 10483422 -240204432 - MER2 DNA MER2_type -149 196 1 1794 167 40 22 chr2 10483723 10484094 -240203760 + L1MC1 LINE L1 5956 6333 0 473 318 64 98 chr2 10484317 10484490 -240203364 - L3 LINE CR1 -761 816 639 2438 83 3 0 chr2 10484490 10484792 -240203062 + AluSp SINE Alu 1 303 -10 473 318 64 98 chr2 10484792 10485065 -240202789 - L3 LINE CR1 -938 639 390 1756 175 7 3 chr2 10485065 10485362 -240202492 + AluJb SINE Alu 11 308 -4 473 318 64 98 chr2 10485362 10485462 -240202392 - L3 LINE CR1 -1187 390 288 248 233 276 17 chr2 10485861 10485977 -240201877 - MIR3 SINE MIR -21 187 42 22 70 0 0 chr2 10486186 10486229 -240201625 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr2 10487051 10487087 -240200767 + AT_rich Low_complexity Low_complexity 1 36 0 318 127 113 0 chr2 10487751 10487822 -240200032 + L1ME4a LINE L1 6042 6120 -1 272 262 58 81 chr2 10487916 10488088 -240199766 - MIR SINE MIR -46 216 49 785 164 0 0 chr2 10488303 10488425 -240199429 + FLAM_A SINE Alu 4 125 -8 203 193 18 18 chr2 10488733 10488790 -240199064 + (CA)n Simple_repeat Simple_repeat 1 57 0 737 158 0 0 chr2 10489828 10489942 -240197912 + FLAM_A SINE Alu 2 115 -18 2166 99 0 3 chr2 10490777 10491070 -240196784 + AluSx SINE Alu 1 292 -20 846 288 90 54 chr2 10491231 10491599 -240196255 - L2 LINE L2 -1062 2252 1872 433 301 52 42 chr2 10491808 10492001 -240195853 - MIR SINE MIR -11 251 57 21 57 0 0 chr2 10492037 10492072 -240195782 + AT_rich Low_complexity Low_complexity 1 35 0 1830 137 158 12 chr2 10492272 10492614 -240195240 + MSTA LTR MaLR 1 392 -36 189 298 88 35 chr2 10492661 10492718 -240195136 + MIR SINE MIR 16 75 -133 206 295 167 0 chr2 10492744 10492822 -240195032 - L2 LINE L2 -1356 1958 1868 184 218 127 55 chr2 10492835 10492890 -240194964 + MIR SINE MIR 83 141 -67 322 123 14 123 chr2 10492997 10493070 -240194784 + MER96B DNA MER1_type? 168 232 -185 * 918 166 91 58 chr2 10493069 10493310 -240194544 + MER96B DNA MER1_type? 169 417 0 2422 57 3 13 chr2 10493386 10493687 -240194167 + AluY SINE Alu 1 298 -13 211 167 0 42 chr2 10493694 10493742 -240194112 + GA-rich Low_complexity Low_complexity 2 47 0 1930 131 0 36 chr2 10494293 10494598 -240193256 - AluSx SINE Alu -18 294 1 2208 106 0 0 chr2 10495184 10495476 -240192378 + AluSx SINE Alu 1 292 -20 685 0 24 0 chr2 10495476 10495561 -240192293 + (GA)n Simple_repeat Simple_repeat 2 88 0 225 338 28 0 chr2 10496527 10496672 -240191182 + L1ME3A LINE L1 5689 5837 -284 234 266 278 6 chr2 10497086 10497259 -240190595 - L1M4 LINE L1 -1538 4608 4389 496 237 89 7 chr2 10497479 10497614 -240190240 + L1ME3A LINE L1 5993 6138 -32 2175 114 20 0 chr2 10497703 10498002 -240189852 + AluSx SINE Alu 1 305 -7 2335 80 0 23 chr2 10498496 10498798 -240189056 + AluSg SINE Alu 1 295 -15 1764 92 8 16 chr2 10499772 10500021 -240187833 - AluSq SINE Alu -16 297 51 1726 169 51 3 chr2 10500211 10500506 -240187348 + AluJb SINE Alu 1 309 -3 203 182 0 0 chr2 10502267 10502300 -240185554 + (CA)n Simple_repeat Simple_repeat 1 33 0 1296 166 42 33 chr2 10502394 10502731 -240185123 + Charlie1 DNA MER1_type 2303 2642 -119 1002 215 38 57 chr2 10502783 10503150 -240184704 - L1ME1 LINE L1 -5 6161 5802 2935 156 73 14 chr2 10503181 10503808 -240184046 + L1MC2 LINE L1 5670 6333 -11 23 0 0 0 chr2 10503955 10503978 -240183876 + AT_rich Low_complexity Low_complexity 1 23 0 227 224 104 15 chr2 10504539 10504606 -240183248 + L1MC/D LINE L1 5732 5804 -529 222 258 0 32 chr2 10505619 10505681 -240182173 - L2 LINE L2 -86 3227 3168 26 30 0 0 chr2 10505945 10505978 -240181876 + AT_rich Low_complexity Low_complexity 1 33 0 776 193 58 18 chr2 10506400 10506571 -240181283 + MER3 DNA MER1_type 32 209 0 21 36 0 0 chr2 10506693 10506721 -240181133 + AT_rich Low_complexity Low_complexity 1 28 0 258 340 158 14 chr2 10507833 10508042 -240179812 + MIR SINE MIR 3 241 -21 333 0 0 0 chr2 10508089 10508126 -240179728 + (TA)n Simple_repeat Simple_repeat 2 38 0 11423 37 11 1 chr2 10508128 10510290 -240177564 - L1PA5 LINE L1 0 6154 3976 411 308 107 16 chr2 10510398 10510701 -240177153 - MLT1J LTR MaLR -2 509 137 831 228 120 48 chr2 10511142 10511476 -240176378 + L1MEc LINE L1 73 430 -5966 704 217 100 11 chr2 10511513 10511693 -240176161 + L1MEc LINE L1 504 699 -5697 1952 131 7 7 chr2 10511694 10511985 -240175869 - AluSg SINE Alu -18 292 2 243 135 0 0 chr2 10511985 10512022 -240175832 + Alu SINE Alu 36 72 -228 1999 145 0 45 chr2 10512346 10512705 -240175149 + MLT1B LTR MaLR 2 344 -46 251 103 0 0 chr2 10512771 10512810 -240175044 + L1MA8 LINE L1 6234 6272 -19 28 29 0 0 chr2 10512887 10512922 -240174932 + AT_rich Low_complexity Low_complexity 1 35 0 273 306 111 9 chr2 10513733 10513841 -240174013 + MIR SINE MIR 19 137 -71 2088 170 31 12 chr2 10514184 10514601 -240173253 - L1MC1 LINE L1 0 6333 5909 1807 108 16 49 chr2 10514601 10514667 -240173187 + L1MC1 LINE L1 5608 5675 -658 2082 78 37 0 chr2 10514667 10514966 -240172888 + AluSc SINE Alu 1 309 0 1807 108 16 49 chr2 10514966 10515197 -240172657 + L1MC1 LINE L1 5675 5898 -435 191 80 0 0 chr2 10515253 10515278 -240172576 + L2 LINE L2 3217 3241 -31 725 203 83 95 chr2 10515625 10515867 -240171987 - MER8 DNA MER2_type 0 239 1 1118 331 172 43 chr2 10516065 10518086 -240169768 - L2 LINE L2 -437 2877 596 1726 174 4 0 chr2 10518100 10518375 -240169479 - AluJb SINE Alu -36 276 1 200 233 55 68 chr2 10518759 10518832 -240169022 - L2 LINE L2 -1 3271 3200 3710 36 0 0 chr2 10519146 10519586 -240168268 + L1PA3 LINE L1 5709 6148 -7 524 116 42 53 chr2 10521109 10521204 -240166650 + AluSg/x SINE Alu 199 292 -17 790 63 5 68 chr2 10521247 10521438 -240166416 + (GGA)n Simple_repeat Simple_repeat 2 180 0 237 65 0 0 chr2 10521672 10521703 -240166151 + (A)n Simple_repeat Simple_repeat 1 31 0 2227 105 0 7 chr2 10521858 10522153 -240165701 - AluSc SINE Alu -16 293 1 642 71 0 0 chr2 10522167 10522252 -240165602 - L1PA5 LINE L1 -2 6152 6068 272 322 74 16 chr2 10523325 10523446 -240164408 + L2 LINE L2 3180 3307 -6 1330 224 116 77 chr2 10523477 10524301 -240163553 + L2 LINE L2 2288 3313 0 596 203 129 25 chr2 10524299 10524462 -240163392 - MIR SINE MIR -13 249 70 * 6746 53 10 24 chr2 10524462 10525085 -240162769 + L1PA7 LINE L1 4983 5583 -571 1920 118 0 0 chr2 10525085 10525348 -240162506 + AluSx SINE Alu 1 263 -49 6746 53 10 24 chr2 10525348 10525893 -240161961 + L1PA7 LINE L1 5583 6134 -20 405 0 0 0 chr2 10525896 10525941 -240161913 + (TAA)n Simple_repeat Simple_repeat 3 47 0 764 291 81 73 chr2 10526138 10526682 -240161172 + L2 LINE L2 2768 3313 0 314 307 48 24 chr2 10527086 10527252 -240160602 + L1MEc LINE L1 44 213 -6183 874 123 23 0 chr2 10527569 10527699 -240160155 + FLAM_C SINE Alu 1 133 0 2498 63 0 0 chr2 10527893 10528195 -240159659 + AluY SINE Alu 1 302 -9 593 236 58 71 chr2 10528284 10528593 -240159261 + L1MEc LINE L1 667 971 -5234 2348 95 0 28 chr2 10528595 10528912 -240158942 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 10529117 10529138 -240158716 + AT_rich Low_complexity Low_complexity 1 21 0 2062 116 148 19 chr2 10529138 10529517 -240158337 + MSTA LTR MaLR 1 428 0 690 284 84 6 chr2 10529536 10529856 -240157998 + L1MEc LINE L1 2280 2624 -3591 321 266 78 47 chr2 10531062 10531190 -240156664 + L2 LINE L2 3182 3313 0 509 261 49 8 chr2 10532408 10532587 -240155267 + MIR SINE MIR 30 213 -49 2331 106 0 0 chr2 10533122 10533424 -240154430 + AluSx SINE Alu 1 302 -10 286 307 175 53 chr2 10534461 10534494 -240153360 + MIR SINE MIR 1 29 -233 2174 105 0 26 chr2 10534494 10534799 -240153055 + AluSg SINE Alu 2 298 -12 286 307 175 53 chr2 10534799 10534993 -240152861 + MIR SINE MIR 29 256 -6 330 297 7 41 chr2 10535167 10535312 -240152542 + L1ME4a LINE L1 5927 6066 -55 2288 95 48 28 chr2 10535385 10535742 -240152112 + THE1B LTR MaLR 1 364 0 33 43 0 0 chr2 10535825 10535872 -240151982 + AT_rich Low_complexity Low_complexity 1 47 0 198 0 0 0 chr2 10536608 10536630 -240151224 + (CA)n Simple_repeat Simple_repeat 1 22 0 1031 292 92 44 chr2 10537242 10537763 -240150091 - L2 LINE L2 -715 2599 2054 686 299 25 29 chr2 10537904 10538148 -240149706 + MIR SINE MIR 20 262 0 726 208 0 50 chr2 10538784 10538943 -240148911 + AluJo SINE Alu 16 166 -146 1892 129 58 0 chr2 10538943 10539252 -240148602 - Tigger3(Golem) DNA MER2_type -636 2393 2067 728 184 0 98 chr2 10539248 10539411 -240148443 - Tigger3(Golem) DNA MER2_type -2882 147 1 * 280 264 136 50 chr2 10540201 10540341 -240147513 - MIR SINE MIR -57 205 54 191 91 0 45 chr2 10540466 10540510 -240147344 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 500 77 0 0 chr2 10540658 10540723 -240147131 - AluY SINE Alu -12 299 235 1249 111 0 11 chr2 10540723 10540903 -240146951 - AluY SINE Alu -133 178 1 2113 224 31 4 chr2 10540931 10541409 -240146445 + L1MCa LINE L1 27 517 -5909 214 171 0 0 chr2 10541423 10541464 -240146390 + (TG)n Simple_repeat Simple_repeat 2 42 0 315 0 0 0 chr2 10541479 10541514 -240146340 + (TG)n Simple_repeat Simple_repeat 2 36 0 3086 159 70 45 chr2 10541529 10542185 -240145669 - L1M4c LINE L1 -4776 1608 929 2068 128 3 0 chr2 10542185 10542482 -240145372 + AluSx SINE Alu 1 298 -14 3086 159 70 45 chr2 10542482 10542596 -240145258 - L1M4c LINE L1 -5455 929 819 1688 183 0 11 chr2 10542723 10543008 -240144846 - AluJb SINE Alu -30 282 1 6207 175 90 57 chr2 10543009 10544594 -240143260 - L1MCa LINE L1 -4763 1663 27 2451 41 24 0 chr2 10544700 10544991 -240142863 + AluY SINE Alu 1 298 -13 6234 207 56 64 chr2 10545099 10545552 -240142302 + L1MCa LINE L1 1688 2143 -4283 2051 121 35 0 chr2 10545552 10545842 -240142012 + AluSx SINE Alu 1 300 -12 6234 207 56 64 chr2 10545842 10546775 -240141079 + L1MCa LINE L1 2143 3082 -3344 969 81 0 0 chr2 10546775 10546898 -240140956 + AluY SINE Alu 174 296 -15 6234 207 56 64 chr2 10546898 10547237 -240140617 + L1MCa LINE L1 3082 3422 -3004 225 0 0 0 chr2 10547237 10547262 -240140592 + (CAA)n Simple_repeat Simple_repeat 3 27 0 6234 207 56 64 chr2 10547262 10547756 -240140098 + L1MCa LINE L1 3422 3919 -2507 1661 152 42 30 chr2 10547756 10547929 -240139925 - MER44D DNA MER2_type -1882 609 440 2314 93 0 0 chr2 10547929 10548231 -240139623 + AluSq SINE Alu 1 302 -11 1661 152 42 30 chr2 10548231 10548392 -240139462 - MER44D DNA MER2_type -2051 440 1 6234 207 56 64 chr2 10548392 10548650 -240139204 + L1MCa LINE L1 3919 4178 -2248 2271 105 0 3 chr2 10548650 10548955 -240138899 - AluSx SINE Alu -8 304 1 6234 207 56 64 chr2 10548955 10549605 -240138249 + L1MCa LINE L1 4178 4911 -1515 1350 179 37 7 chr2 10549608 10549904 -240137950 + L1MCa LINE L1 1900 2204 -4222 722 163 18 54 chr2 10549921 10550087 -240137767 - L1MC2 LINE L1 -10 6334 6175 2194 97 0 39 chr2 10601110 10601420 -240086434 + AluSq SINE Alu 1 298 -15 279 291 120 49 chr2 10601505 10601650 -240086204 + MIR SINE MIR 3 153 -58 2441 42 0 3 chr2 10601752 10602070 -240085784 + AluY SINE Alu 1 317 0 2293 108 3 0 chr2 10604154 10604459 -240083395 + AluSx SINE Alu 6 311 -1 300 233 138 0 chr2 10604549 10604665 -240083189 + MIR3 SINE MIR 48 179 -29 2281 102 0 0 chr2 10605097 10605409 -240082445 + AluSq SINE Alu 1 312 0 1326 139 10 19 chr2 10606276 10606485 -240081369 - AluJo SINE Alu -105 207 1 350 69 17 0 chr2 10606595 10606653 -240081201 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 846 240 0 62 chr2 10606776 10607001 -240080853 + MIR SINE MIR 21 231 -31 354 305 85 0 chr2 10607129 10607166 -240080688 + L2 LINE L2 3143 3175 -97 1188 195 145 11 chr2 10607166 10607428 -240080426 - AluJo SINE Alu -4 298 2 354 305 85 0 chr2 10607428 10607508 -240080346 + L2 LINE L2 3175 3270 -2 466 276 119 27 chr2 10607605 10607790 -240080064 - MIR SINE MIR -12 250 49 2214 121 0 13 chr2 10608304 10608611 -240079243 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr2 10608611 10608635 -240079219 + (TA)n Simple_repeat Simple_repeat 2 25 0 557 181 69 0 chr2 10609034 10609150 -240078704 + MER3 DNA MER1_type 7 130 -79 206 54 0 54 chr2 10609150 10609187 -240078667 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 843 152 0 0 chr2 10609265 10609403 -240078451 + MLT1A1 LTR MaLR 1 138 -227 * 2034 149 109 92 chr2 10609402 10610018 -240077836 + MER4A LTR ERV1 37 662 -2 2043 149 41 70 chr2 10610029 10610569 -240077285 - MLT2A2 LTR ERVL 0 554 1 943 121 45 38 chr2 10610572 10610729 -240077125 + MLT1A1 LTR MaLR 208 365 0 510 243 19 0 chr2 10610730 10610837 -240077017 + MER5A DNA MER1_type 1 109 -80 219 139 28 0 chr2 10610869 10610905 -240076949 - MIR3 SINE MIR -50 158 122 539 135 15 2 chr2 10611032 10611125 -240076729 - MSTD LTR MaLR -54 413 244 682 151 0 0 chr2 10611132 10611238 -240076616 - MSTD LTR MaLR -290 106 1 315 95 11 7 chr2 10611663 10611718 -240076136 + AluJo SINE Alu 1 44 -255 231 301 81 62 chr2 10611718 10612027 -240075827 - L2 LINE L2 -1743 1571 1257 187 254 186 0 chr2 10612197 10612256 -240075598 - MIR3 SINE MIR -11 197 128 1894 127 3 7 chr2 10612256 10612548 -240075306 - MSTA LTR MaLR 0 428 138 846 141 15 0 chr2 10612687 10612822 -240075032 - MSTA LTR MaLR -291 137 1 253 295 42 11 chr2 10612824 10612919 -240074935 - MIR SINE MIR -78 130 33 197 321 0 0 chr2 10613074 10613127 -240074727 + MIR SINE MIR 95 147 -61 209 222 0 0 chr2 10613791 10613836 -240074018 + T-rich Low_complexity Low_complexity 1 45 0 311 364 128 5 chr2 10614084 10614271 -240073583 + L2 LINE L2 2862 3071 -201 2237 109 0 10 chr2 10614760 10615062 -240072792 - AluSc SINE Alu -10 299 1 1797 140 0 15 chr2 10615233 10615504 -240072350 + AluJo SINE Alu 26 292 -20 796 294 126 26 chr2 10615850 10616130 -240071724 - L1MC4a LINE L1 -1638 6170 5919 2276 121 7 0 chr2 10616130 10616437 -240071417 - AluSq SINE Alu -4 309 1 796 294 126 26 chr2 10616437 10616727 -240071127 - L1MC4a LINE L1 -1889 5919 5543 1792 164 3 35 chr2 10617029 10617346 -240070508 + AluJo SINE Alu 1 307 -5 1604 157 23 134 chr2 10618255 10618469 -240069385 + MLT1B LTR MaLR 1 143 -247 2178 125 0 3 chr2 10618469 10618765 -240069089 + AluSx SINE Alu 1 295 -17 1604 157 23 134 chr2 10618765 10618989 -240068865 + MLT1B LTR MaLR 143 390 0 234 0 0 0 chr2 10619345 10619371 -240068483 + (TG)n Simple_repeat Simple_repeat 1 26 0 762 152 0 23 chr2 10620215 10620347 -240067507 + FLAM_C SINE Alu 5 133 0 263 224 40 0 chr2 10620375 10620451 -240067403 + MER58 DNA MER1_type 2342 2420 0 479 273 120 0 chr2 10620668 10620851 -240067003 + L1ME3 LINE L1 5687 5891 -271 203 229 0 0 chr2 10621489 10621524 -240066330 + polypurine Low_complexity Low_complexity 2 36 0 1992 127 60 0 chr2 10622769 10623053 -240064801 - AluSq SINE Alu -12 301 1 314 169 31 0 chr2 10623110 10623175 -240064679 - L1MD3 LINE L1 -1016 6979 6913 335 274 123 19 chr2 10623356 10623462 -240064392 - MIR SINE MIR -112 150 34 245 314 39 0 chr2 10623875 10623977 -240063877 + MIR SINE MIR 128 233 -29 699 101 0 0 chr2 10624184 10624283 -240063571 - L1MB5 LINE L1 -7 6167 6069 316 282 141 0 chr2 10624470 10624555 -240063299 - L2 LINE L2 -4 3309 3213 228 305 124 38 chr2 10625569 10625674 -240062180 + L2 LINE L2 2992 3105 -167 229 279 115 49 chr2 10625956 10626078 -240061776 - L2 LINE L2 -9 3304 3175 268 359 60 28 chr2 10626284 10626501 -240061353 - MIR SINE MIR -30 232 9 354 258 92 58 chr2 10626875 10626995 -240060859 + L2 LINE L2 3141 3264 -8 284 178 14 0 chr2 10626995 10627068 -240060786 + (TCCA)n Simple_repeat Simple_repeat 2 75 0 824 162 6 0 chr2 10627106 10627273 -240060581 + (TCCA)n Simple_repeat Simple_repeat 4 171 0 333 0 0 0 chr2 10628392 10628429 -240059425 + (TG)n Simple_repeat Simple_repeat 1 37 0 520 168 112 0 chr2 10629478 10629585 -240058269 + 5S rRNA rRNA 2 120 -1 2211 43 0 18 chr2 10629731 10630010 -240057844 - AluY SINE Alu -14 297 24 2246 85 10 7 chr2 10630898 10631203 -240056651 + AluY SINE Alu 2 307 -4 2173 103 3 3 chr2 10631524 10631836 -240056018 - AluSq SINE Alu -1 312 1 231 317 17 0 chr2 10631861 10631921 -240055933 + L2 LINE L2 3141 3201 -71 1613 174 0 4 chr2 10631935 10632216 -240055638 + AluJb SINE Alu 1 280 -32 784 262 30 47 chr2 10632239 10632333 -240055521 - MIR SINE MIR -13 249 155 1578 229 92 79 chr2 10632333 10632950 -240054904 - MLT1E2 LTR MaLR -1 625 1 784 262 30 47 chr2 10632950 10633088 -240054766 - MIR SINE MIR -107 155 21 1681 184 0 7 chr2 10633181 10633490 -240054364 - AluJo SINE Alu -5 307 1 1006 93 0 7 chr2 10634315 10634455 -240053399 - MER85 DNA T2_type 0 139 1 3213 96 6 17 chr2 10635013 10635480 -240052374 + L1PA13 LINE L1 5702 6163 0 222 150 0 0 chr2 10636112 10636152 -240051702 + (CA)n Simple_repeat Simple_repeat 1 40 0 398 249 104 57 chr2 10636819 10637078 -240050776 + MLT1J LTR MaLR 1 269 -242 2070 119 27 0 chr2 10637303 10637598 -240050256 + AluSx SINE Alu 1 303 -9 391 329 43 7 chr2 10638383 10638523 -240049331 + MIR SINE MIR 3 147 -115 1214 214 43 46 chr2 10638590 10638637 -240049217 - HAL1 LINE L1 -87 2420 2374 2047 120 0 7 chr2 10638637 10638938 -240048916 - AluSx SINE Alu -13 299 1 1214 214 43 46 chr2 10638938 10639283 -240048571 - HAL1 LINE L1 -133 2374 2029 304 318 95 8 chr2 10639717 10639843 -240048011 - L2 LINE L2 0 3272 3136 822 172 15 0 chr2 10640579 10640713 -240047141 - FAM SINE Alu -16 169 34 1164 279 68 31 chr2 10641390 10641968 -240045886 + L1ME3A LINE L1 5353 5951 -219 288 186 204 115 chr2 10642039 10642122 -240045732 + MER5A DNA MER1_type 55 153 -36 1773 148 0 14 chr2 10642122 10642442 -240045412 - AluJb SINE Alu 0 316 1 288 186 204 115 chr2 10642442 10642470 -240045384 + MER5A DNA MER1_type 153 177 -12 932 75 15 0 chr2 10642534 10642667 -240045187 + AluSc SINE Alu 166 300 -9 259 148 68 34 chr2 10643524 10643612 -240044242 - L1ME4a LINE L1 -8 6113 6023 42 20 0 0 chr2 10643616 10643665 -240044189 + AT_rich Low_complexity Low_complexity 1 49 0 1865 137 3 0 chr2 10643665 10643950 -240043904 - AluSx SINE Alu -26 286 1 380 93 0 0 chr2 10643964 10644018 -240043836 - L1ME4a LINE L1 -109 6012 5959 502 281 102 12 chr2 10644926 10645093 -240042761 - MIR SINE MIR -14 248 67 195 100 0 0 chr2 10645111 10645141 -240042713 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 649 239 37 50 chr2 10645405 10645623 -240042231 - MIR SINE MIR -33 229 15 557 333 50 74 chr2 10646776 10647292 -240040562 - HAL1 LINE L1 -1519 988 485 234 0 0 0 chr2 10647464 10647490 -240040364 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 27 0 0 0 chr2 10647657 10647684 -240040170 + AT_rich Low_complexity Low_complexity 1 27 0 267 338 68 87 chr2 10648033 10648299 -240039555 - L2 LINE L2 -12 3260 3000 1930 134 3 3 chr2 10649035 10649342 -240038512 - AluSq SINE Alu -6 307 1 885 214 92 0 chr2 10649449 10649655 -240038199 - MIR SINE MIR -30 232 8 217 112 72 16 chr2 10649723 10649848 -240038006 + (TA)n Simple_repeat Simple_repeat 1 132 0 735 12 0 0 chr2 10650689 10650773 -240037081 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 239 188 0 31 chr2 10650773 10650837 -240037017 + CT-rich Low_complexity Low_complexity 4 65 0 * 298 170 18 27 chr2 10650831 10650943 -240036911 + (CTTG)n Simple_repeat Simple_repeat 2 112 0 * 371 183 14 42 chr2 10650938 10651080 -240036774 + CT-rich Low_complexity Low_complexity 5 142 0 193 116 23 23 chr2 10651122 10651165 -240036689 + CT-rich Low_complexity Low_complexity 4 46 0 524 243 6 0 chr2 10651499 10651668 -240036186 + (TG)n Simple_repeat Simple_repeat 1 170 0 423 0 0 0 chr2 10652013 10652060 -240035794 + (TG)n Simple_repeat Simple_repeat 1 47 0 812 124 0 8 chr2 10652805 10652934 -240034920 + FLAM_A SINE Alu 13 140 -2 759 154 16 0 chr2 10652956 10653079 -240034775 + FRAM SINE Alu 1 117 -59 2007 69 62 0 chr2 10653164 10653452 -240034402 - AluY SINE Alu -5 306 1 225 0 0 0 chr2 10653563 10653588 -240034266 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1932 140 0 3 chr2 10653601 10653893 -240033961 - AluSx SINE Alu -15 297 7 696 195 49 0 chr2 10654651 10654774 -240033080 - FLAM_C SINE Alu -13 130 2 254 188 21 0 chr2 10654881 10654929 -240032925 + AluY SINE Alu 119 167 -134 2095 113 0 0 chr2 10654929 10655220 -240032634 + AluSq SINE Alu 19 309 -4 436 351 71 24 chr2 10655264 10655560 -240032294 - L1ME4a LINE L1 -147 5974 5665 197 356 59 42 chr2 10655718 10655836 -240032018 + L2 LINE L2 3170 3289 -24 396 244 41 86 chr2 10655943 10656140 -240031714 - L1MC5 LINE L1 -33 7928 7741 231 338 52 13 chr2 10656242 10656396 -240031458 + MIR3 SINE MIR 32 191 -17 769 214 39 6 chr2 10656427 10656605 -240031249 + MER5A DNA MER1_type 3 186 -3 2130 120 0 0 chr2 10656834 10657134 -240030720 + AluSq SINE Alu 1 300 -13 503 225 101 7 chr2 10657259 10657397 -240030457 + L2 LINE L2 3161 3311 -2 1854 118 19 45 chr2 10657496 10657809 -240030045 + AluSg SINE Alu 1 305 -5 248 319 217 12 chr2 10658065 10658231 -240029623 - MIR SINE MIR -1 261 62 293 162 47 54 chr2 10658231 10658379 -240029475 + (TTATA)n Simple_repeat Simple_repeat 1 147 0 3736 171 14 43 chr2 10658383 10658874 -240028980 - L1MB7 LINE L1 -26 6158 5695 2216 100 0 0 chr2 10658874 10659174 -240028680 - AluSx SINE Alu -12 300 1 3736 171 14 43 chr2 10659174 10659442 -240028412 - L1MB7 LINE L1 -489 5695 5421 276 327 163 0 chr2 10659892 10660045 -240027809 + MIR SINE MIR 77 254 -8 325 239 0 0 chr2 10661456 10661523 -240026331 - MER6 DNA MER2_type 0 865 799 256 122 24 0 chr2 10661529 10661568 -240026286 + MER6 DNA MER2_type 738 777 -88 2176 104 27 99 chr2 10661568 10661933 -240025921 - MER1B DNA MER1_type 0 339 1 214 333 12 25 chr2 10662056 10662137 -240025717 - L2 LINE L2 -1 3271 3192 350 299 17 8 chr2 10662350 10662467 -240025387 - MIR SINE MIR -80 182 65 465 284 136 0 chr2 10662644 10662799 -240025055 + MER5A DNA MER1_type 14 189 0 524 261 118 33 chr2 10662986 10663197 -240024657 + MIR SINE MIR 14 242 -20 248 291 197 0 chr2 10663542 10663669 -240024185 - MIR SINE MIR -12 250 99 318 203 14 0 chr2 10663669 10663738 -240024116 - MER116 DNA Mariner -1 79 10 927 246 22 18 chr2 10663863 10664087 -240023767 - MIR SINE MIR -35 227 3 184 268 134 12 chr2 10664278 10664360 -240023494 - MIR SINE MIR -117 145 54 999 169 75 0 chr2 10664981 10665182 -240022672 - L1MD1 LINE L1 -1 6241 6026 550 151 0 0 chr2 10665185 10665271 -240022583 - FRAM SINE Alu -16 160 75 842 129 0 0 chr2 10665298 10665422 -240022432 - FLAM_C SINE Alu -19 124 1 4035 175 22 21 chr2 10665427 10666308 -240021546 - L1MD1 LINE L1 -206 6036 5152 746 112 0 0 chr2 10666309 10666416 -240021438 - AluJb SINE Alu 0 312 206 1075 199 46 42 chr2 10666417 10666723 -240021131 - L1MD1 LINE L1 -974 5172 4866 275 271 164 7 chr2 10667964 10668104 -240019750 - L1ME4a LINE L1 -16 6105 5944 1829 96 13 80 chr2 10668313 10668485 -240019369 - AluSx SINE Alu -18 294 149 2160 104 10 0 chr2 10668485 10668784 -240019070 - AluSx SINE Alu -10 302 1 1829 96 13 80 chr2 10668784 10668913 -240018941 - AluSx SINE Alu -163 149 13 2083 111 0 0 chr2 10669730 10670019 -240017835 - AluSx SINE Alu -23 289 1 2376 84 0 0 chr2 10670231 10670542 -240017312 - AluSq SINE Alu -2 311 1 1738 172 0 3 chr2 10670545 10670847 -240017007 - AluJb SINE Alu -11 301 1 305 341 98 12 chr2 10671140 10671304 -240016550 - MIR SINE MIR -65 197 20 617 297 96 33 chr2 10671679 10672043 -240015811 - L1ME4a LINE L1 -339 5827 5441 2034 222 51 27 chr2 10672175 10672702 -240015152 - MER44D DNA MER2_type 0 605 11 1733 194 144 2 chr2 10672718 10673121 -240014733 - L1MB7 LINE L1 -16 6168 5709 193 303 110 46 chr2 10673149 10673258 -240014596 - MIR SINE MIR -9 253 138 2055 114 7 0 chr2 10673265 10673555 -240014299 - AluSx SINE Alu -19 293 2 22 35 0 0 chr2 10673842 10673871 -240013983 + AT_rich Low_complexity Low_complexity 1 29 0 1655 164 3 17 chr2 10673886 10674185 -240013669 + AluJo SINE Alu 1 295 -17 304 315 111 0 chr2 10674389 10674497 -240013357 - L2 LINE L2 -1 3312 3193 2098 85 18 0 chr2 10675462 10675744 -240012110 + AluSx SINE Alu 11 297 -15 2688 39 3 3 chr2 10677188 10677499 -240010355 - AluY SINE Alu 0 311 1 1391 247 44 43 chr2 10677587 10677888 -240009966 - L1MC5 LINE L1 -46 7915 7616 2101 187 6 3 chr2 10677888 10678252 -240009602 + MLT1A1 LTR MaLR 1 365 0 1391 247 44 43 chr2 10678252 10678558 -240009296 - L1MC5 LINE L1 -345 7616 7307 770 243 11 5 chr2 10678716 10678901 -240008953 - L1MC5 LINE L1 -733 7228 7043 360 203 24 17 chr2 10679010 10679187 -240008667 + CT-rich Low_complexity Low_complexity 1 178 0 497 209 0 14 chr2 10679204 10679343 -240008511 + CT-rich Low_complexity Low_complexity 2 138 0 1886 179 7 0 chr2 10679343 10679650 -240008204 - AluJo SINE Alu -3 309 1 198 0 0 0 chr2 10680095 10680117 -240007737 + (T)n Simple_repeat Simple_repeat 1 22 0 221 327 151 62 chr2 10682067 10682425 -240005429 + L2 LINE L2 2809 3198 -74 764 244 106 5 chr2 10683684 10683901 -240003953 - MIR SINE MIR -13 249 11 2123 96 7 4 chr2 10684503 10684811 -240003043 - AluY SINE Alu 0 309 1 2220 116 3 0 chr2 10685107 10685409 -240002445 - AluSx SINE Alu -9 303 1 1860 86 19 4 chr2 10685471 10685727 -240002127 - AluSq SINE Alu -53 260 1 472 275 47 7 chr2 10685969 10686118 -240001736 + MIR SINE MIR 82 236 -26 2401 97 3 0 chr2 10686191 10686501 -240001353 + AluSx SINE Alu 1 311 -1 2222 104 10 0 chr2 10687239 10687538 -240000316 - AluSx SINE Alu -10 302 1 317 260 67 80 chr2 10687593 10687743 -240000111 + MIR SINE MIR 50 197 -65 256 229 57 51 chr2 10688017 10688192 -239999662 - HAL1 LINE L1 -121 2386 2211 1834 152 24 3 chr2 10688195 10688485 -239999369 + AluJo SINE Alu 1 296 -16 339 261 0 0 chr2 10688554 10688688 -239999166 + (CA)n Simple_repeat Simple_repeat 1 134 0 250 230 0 40 chr2 10688690 10688764 -239999090 - HAL1 LINE L1 -285 2222 2152 1778 241 161 14 chr2 10688810 10689547 -239998307 - HAL1 LINE L1 -485 2022 1177 956 244 243 54 chr2 10689882 10690232 -239997622 - HAL1 LINE L1 -1324 1183 900 2173 119 10 3 chr2 10690232 10690543 -239997311 + AluSq SINE Alu 1 313 0 956 244 243 54 chr2 10690543 10691187 -239996667 - HAL1 LINE L1 -1607 900 1 384 248 19 9 chr2 10691553 10691658 -239996196 + HAL1 LINE L1 742 847 -1660 528 58 0 0 chr2 10692002 10692071 -239995783 + tRNA-Glu-GAG tRNA tRNA 7 75 0 231 279 24 55 chr2 10692326 10692439 -239995415 - MIR SINE MIR -41 167 57 231 283 20 50 chr2 10692771 10692870 -239994984 + MIR3 SINE MIR 83 178 -30 2692 20 3 0 chr2 10693024 10693321 -239994533 + AluY SINE Alu 1 298 -13 1542 146 120 18 chr2 10693525 10693800 -239994054 + AluJb SINE Alu 1 303 -9 388 287 52 32 chr2 10695225 10695594 -239992260 + L1M4 LINE L1 2853 3228 -2918 339 281 60 126 chr2 10695601 10695848 -239992006 + L1ME4a LINE L1 5745 5958 -163 1645 173 55 14 chr2 10695848 10696194 -239991660 + L1MB8 LINE L1 5819 6178 0 339 281 60 126 chr2 10696194 10696344 -239991510 + L1ME4a LINE L1 5958 6116 -5 197 338 54 0 chr2 10700320 10700394 -239987460 + L3 LINE CR1 1023 1100 -477 546 326 28 11 chr2 10700398 10700576 -239987278 - MIR3 SINE MIR -12 196 16 2340 116 0 0 chr2 10700713 10701014 -239986840 + AluSq SINE Alu 1 301 -12 465 35 0 0 chr2 10701488 10701545 -239986309 + U2 snRNA snRNA 1 57 -131 2476 79 0 3 chr2 10701656 10701959 -239985895 - AluSq SINE Alu -11 302 1 891 78 0 0 chr2 10701959 10702074 -239985780 - 5S rRNA rRNA -6 115 1 283 336 21 28 chr2 10702148 10702291 -239985563 + MIR SINE MIR 2 143 -119 190 208 42 21 chr2 10702313 10702361 -239985493 - L2 LINE L2 -7 3306 3258 239 300 189 14 chr2 10702415 10702581 -239985273 + MIR SINE MIR 2 197 -56 2444 92 7 0 chr2 10703263 10703567 -239984287 - AluSx SINE Alu -6 306 1 329 313 23 46 chr2 10703843 10703974 -239983880 + MIR SINE MIR 16 143 -65 247 167 24 0 chr2 10704004 10704046 -239983808 - L2 LINE L2 -13 3300 3258 507 249 34 91 chr2 10704230 10704495 -239983359 - L2 LINE L2 -188 3084 2835 725 150 24 16 chr2 10704693 10704820 -239983034 + FLAM_A SINE Alu 1 128 -5 2141 157 36 14 chr2 10705047 10705403 -239982451 - THE1B LTR MaLR 0 364 1 320 294 119 0 chr2 10705408 10705517 -239982337 + MIR SINE MIR 27 148 -114 2048 135 7 0 chr2 10706329 10706610 -239981244 - AluSx SINE Alu -29 283 1 2105 120 0 3 chr2 10707398 10707718 -239980136 - AluSx SINE Alu 0 319 1 333 250 150 8 chr2 10707720 10707840 -239980014 - MIR SINE MIR -97 165 29 199 314 209 0 chr2 10708112 10708217 -239979637 + MIR3 SINE MIR 30 156 -52 213 299 113 0 chr2 10709750 10709847 -239978007 - L2 LINE L2 -188 3084 2977 373 311 254 0 chr2 10709871 10710064 -239977790 - MIR SINE MIR 0 262 21 840 242 44 54 chr2 10710270 10710420 -239977434 - L1MC5 LINE L1 -114 7847 7697 2068 135 27 0 chr2 10710420 10710716 -239977138 + AluSq SINE Alu 1 304 -9 840 242 44 54 chr2 10710716 10710970 -239976884 - L1MC5 LINE L1 -264 7697 7447 185 356 38 38 chr2 10710993 10711125 -239976729 - L2 LINE L2 -590 2724 2593 2453 64 0 3 chr2 10712006 10712304 -239975550 - AluY SINE Alu -14 297 1 222 321 37 79 chr2 10712779 10712969 -239974885 - MIR3 SINE MIR -7 201 20 441 287 19 93 chr2 10713095 10713311 -239974543 + MIR SINE MIR 49 248 -14 263 286 124 5 chr2 10713329 10713441 -239974413 - MIR SINE MIR -68 140 20 1555 131 0 14 chr2 10716397 10716618 -239971236 + AluSq SINE Alu 83 300 -13 2103 113 3 0 chr2 10717047 10717360 -239970494 + AluSx SINE Alu 1 314 0 746 230 78 10 chr2 10717452 10717656 -239970198 + MER20 DNA MER1_type 2 219 0 227 324 14 0 chr2 10718063 10718134 -239969720 - L2 LINE L2 -5 3267 3196 226 361 30 24 chr2 10719087 10719256 -239968598 - MIR SINE MIR -34 228 59 510 323 25 6 chr2 10719592 10719750 -239968104 + MIR SINE MIR 38 198 -64 837 265 36 9 chr2 10719769 10719988 -239967866 - MIR SINE MIR -24 238 14 2620 116 8 0 chr2 10720191 10720552 -239967302 - THE1B LTR MaLR 0 364 1 216 292 0 0 chr2 10720710 10720823 -239967031 + (TG)n Simple_repeat Simple_repeat 2 114 0 302 333 175 6 chr2 10721447 10721630 -239966224 + MIR SINE MIR 15 228 -34 239 284 168 0 chr2 10721688 10721783 -239966071 - L2 LINE L2 -256 3057 2947 350 258 54 0 chr2 10722010 10722103 -239965751 - MIR3 SINE MIR -7 201 104 248 320 41 67 chr2 10723829 10723871 -239963983 - MER5A DNA MER1_type 0 189 147 2326 99 3 0 chr2 10723871 10724164 -239963690 + AluSq SINE Alu 1 294 -19 248 320 41 67 chr2 10724164 10724315 -239963539 - MER5A DNA MER1_type -42 147 1 521 309 30 24 chr2 10724324 10724492 -239963362 - MER5B DNA MER1_type -2 176 8 208 238 0 0 chr2 10724828 10724870 -239962984 + (ATG)n Simple_repeat Simple_repeat 1 42 0 996 36 0 0 chr2 10725008 10725118 -239962736 + 7SLRNA srpRNA srpRNA 91 200 -120 204 216 0 0 chr2 10725484 10725535 -239962319 + (TG)n Simple_repeat Simple_repeat 2 52 0 374 359 43 17 chr2 10725543 10725777 -239962077 + L3 LINE CR1 1336 1575 -2 238 301 124 9 chr2 10726334 10726447 -239961407 - L2 LINE L2 -1 3271 3146 267 252 50 101 chr2 10727539 10727698 -239960156 + MER5A DNA MER1_type 3 153 -36 432 0 0 0 chr2 10727840 10727888 -239959966 + (CA)n Simple_repeat Simple_repeat 2 49 0 252 356 11 0 chr2 10727947 10728037 -239959817 - MIR SINE MIR -122 140 50 2239 110 3 10 chr2 10728089 10728389 -239959465 + AluSx SINE Alu 1 298 -14 241 233 151 27 chr2 10728587 10728660 -239959194 + MIR3 SINE MIR 81 162 -46 494 289 263 25 chr2 10729279 10730315 -239957539 - L2 LINE L2 -15 3298 2013 488 307 151 9 chr2 10730553 10730872 -239956982 + L2 LINE L2 2854 3217 -96 419 305 175 7 chr2 10731002 10731294 -239956560 - L2 LINE L2 -1297 2017 1677 183 291 157 37 chr2 10731372 10731506 -239956348 - MIR SINE MIR -64 198 49 291 316 107 43 chr2 10731573 10731807 -239956047 + L1ME LINE L1 5341 5589 -532 222 37 0 0 chr2 10732322 10732349 -239955505 + (T)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 10732474 10732497 -239955357 + AT_rich Low_complexity Low_complexity 1 23 0 1888 115 70 4 chr2 10733638 10733908 -239953946 - AluJb SINE Alu -24 288 1 315 299 73 15 chr2 10733909 10734046 -239953808 - L2 LINE L2 0 3313 3169 1873 149 3 24 chr2 10734152 10734448 -239953406 - AluJo SINE Alu -21 291 2 2344 120 0 0 chr2 10734493 10734794 -239953060 - AluSx SINE Alu -11 301 1 2352 91 0 7 chr2 10734824 10735133 -239952721 - AluY SINE Alu -4 307 1 29 0 0 0 chr2 10735133 10735162 -239952692 + AT_rich Low_complexity Low_complexity 1 29 0 332 340 137 0 chr2 10735196 10735349 -239952505 - MIR SINE MIR -19 243 70 207 292 52 117 chr2 10735898 10736206 -239951648 + L2 LINE L2 2977 3264 -8 281 330 44 0 chr2 10738231 10738322 -239949532 - MIR SINE MIR -61 147 53 218 314 14 0 chr2 10738700 10738770 -239949084 + L2 LINE L2 3201 3271 -1 304 281 42 99 chr2 10739156 10739348 -239948506 - MIR3 SINE MIR -24 184 4 1349 111 0 0 chr2 10739469 10739649 -239948205 - AluY SINE Alu -2 309 130 2667 49 0 3 chr2 10739651 10739959 -239947895 - AluY SINE Alu -4 307 1 497 276 99 58 chr2 10741813 10742056 -239945798 - MIR SINE MIR -4 258 6 691 318 17 9 chr2 10743045 10743278 -239944576 - MIR SINE MIR -12 250 16 327 268 49 0 chr2 10743291 10743373 -239944481 - MIR SINE MIR -62 146 61 256 355 103 0 chr2 10743584 10743691 -239944163 + MER103 DNA DNA 2 119 -47 726 326 26 0 chr2 10743942 10744175 -239943679 - MIR SINE MIR -22 240 2 184 296 19 0 chr2 10744251 10744305 -239943549 + MIR SINE MIR 87 141 -67 660 286 162 0 chr2 10744376 10744586 -239943268 + MIR SINE MIR 17 260 -2 426 262 19 9 chr2 10744736 10744843 -239943011 - MIR3 SINE MIR -32 176 69 294 29 0 0 chr2 10745281 10745316 -239942538 + (T)n Simple_repeat Simple_repeat 1 35 0 2389 104 0 0 chr2 10745365 10745663 -239942191 - AluSg SINE Alu -12 298 1 2580 219 68 18 chr2 10745730 10746184 -239941670 - L1ME1 LINE L1 -134 6101 5602 1183 210 17 17 chr2 10746184 10746422 -239941432 + MER8 DNA MER2_type 2 239 0 2580 219 68 18 chr2 10746422 10746632 -239941222 - L1ME1 LINE L1 -633 5602 5404 693 241 14 0 chr2 10746624 10746876 -239940978 - L1ME1 LINE L1 -3712 2503 2240 * 2275 100 0 0 chr2 10746898 10747220 -239940634 - AluSc SINE Alu 0 322 1 1272 186 73 0 chr2 10747259 10747479 -239940375 - AluJo SINE Alu -48 264 29 366 222 0 0 chr2 10747484 10747565 -239940289 - L1ME1 LINE L1 -5250 1146 1066 304 231 0 0 chr2 10747695 10747747 -239940107 - L1MC4 LINE L1 -1339 6703 6652 409 228 53 32 chr2 10747752 10747895 -239939959 - L1MC4 LINE L1 -1339 6983 1932 355 171 26 13 chr2 10747953 10748029 -239939825 - MLT1K LTR MaLR -2 586 510 3565 228 70 16 chr2 10748388 10749376 -239938478 - L1ME1 LINE L1 -5321 1075 35 1689 122 0 17 chr2 10749441 10749711 -239938143 - AluSx SINE Alu 0 322 57 285 180 0 0 chr2 10750593 10750643 -239937211 - L2 LINE L2 -2 3311 3262 1679 174 28 0 chr2 10751511 10751793 -239936061 - AluJo SINE Alu -12 300 11 242 188 0 0 chr2 10751949 10751997 -239935857 + L2 LINE L2 3247 3294 -19 2391 94 0 0 chr2 10752110 10752408 -239935446 + AluSx SINE Alu 1 298 -14 204 322 66 13 chr2 10752889 10753041 -239934813 + MER91B DNA MER1_type 27 186 -4 446 317 0 25 chr2 10753548 10753709 -239934145 - MIR SINE MIR -3 259 103 405 306 0 41 chr2 10754295 10754324 -239933530 - MIR SINE MIR -72 190 161 2378 103 0 0 chr2 10754324 10754625 -239933229 - AluSx SINE Alu -11 301 1 405 306 0 41 chr2 10754625 10754742 -239933112 - MIR SINE MIR -101 161 50 180 0 0 0 chr2 10754749 10754769 -239933085 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2208 54 0 0 chr2 10754771 10755030 -239932824 - AluY SINE Alu -21 290 32 220 171 0 0 chr2 10756151 10756192 -239931662 + MIR SINE MIR 107 147 -115 494 330 63 33 chr2 10759753 10760070 -239927784 - L1MC/D LINE L1 -743 5403 5188 2375 82 0 0 chr2 10760169 10760462 -239927392 - AluSc SINE Alu -4 305 13 216 268 122 0 chr2 10762206 10762288 -239925566 + MIR SINE MIR 124 215 -47 2056 145 0 0 chr2 10762291 10762580 -239925274 - AluSx SINE Alu -23 289 1 6145 154 50 18 chr2 10763269 10763808 -239924046 + Tigger3b DNA MER2_type 2 523 -2505 2215 109 6 40 chr2 10763808 10764129 -239923725 + AluSx SINE Alu 1 310 -2 6145 154 50 18 chr2 10764129 10764538 -239923316 + Tigger3b DNA MER2_type 523 918 -2110 2479 92 0 0 chr2 10764538 10764844 -239923010 - AluSq SINE Alu -7 306 1 6145 154 50 18 chr2 10764844 10764915 -239922939 + Tigger3b DNA MER2_type 918 985 -2043 1363 89 84 5 chr2 10764915 10765128 -239922726 - MER30 DNA MER1_type 0 230 1 6145 154 50 18 chr2 10765128 10765299 -239922555 + Tigger3b DNA MER2_type 985 1231 0 1999 122 47 36 chr2 10765992 10766352 -239921502 - THE1B LTR MaLR 0 364 1 2367 119 0 0 chr2 10766505 10766815 -239921039 + AluSx SINE Alu 1 310 -2 188 318 0 0 chr2 10767584 10767628 -239920226 - L2 LINE L2 -8 3305 3262 256 220 0 17 chr2 10767778 10767837 -239920017 - L2 LINE L2 -19 3294 3237 311 227 15 0 chr2 10769602 10769668 -239918186 + MIR SINE MIR 110 176 -86 426 326 63 27 chr2 10770445 10770666 -239917188 + MIR SINE MIR 24 252 -10 524 281 12 24 chr2 10770722 10770889 -239916965 - L1MC5 LINE L1 -68 7893 7729 1261 247 162 5 chr2 10771676 10772089 -239915765 - MLT1H LTR MaLR -71 478 1 2285 119 3 0 chr2 10772527 10772837 -239915017 - AluSx SINE Alu -1 311 1 2559 62 0 7 chr2 10773480 10773788 -239914066 + AluY SINE Alu 1 306 -5 376 297 108 18 chr2 10773829 10774051 -239913803 - L1ME3A LINE L1 -18 6152 5911 247 306 171 9 chr2 10774053 10774164 -239913690 + MIR SINE MIR 114 242 -20 294 306 33 33 chr2 10774974 10775095 -239912759 + MIR SINE MIR 20 140 -122 422 256 0 0 chr2 10776913 10776999 -239910855 + G-rich Low_complexity Low_complexity 89 174 0 618 245 0 0 chr2 10776999 10777302 -239910552 + (CAGAGA)n Simple_repeat Simple_repeat 1 303 0 546 227 109 32 chr2 10978105 10978310 -239709544 - MIR SINE MIR -1 261 44 6651 92 16 16 chr2 10978881 10979965 -239707889 + SVA Other Other 433 1360 -26 661 11 0 23 chr2 10979965 10980053 -239707801 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 255 315 56 19 chr2 10980053 10980161 -239707693 + MIR3 SINE MIR 74 185 -23 222 278 130 9 chr2 10980257 10980365 -239707489 - MIR3 SINE MIR -31 177 57 3083 160 25 27 chr2 10980688 10981289 -239706565 + L1MB2 LINE L1 5444 6043 -128 493 111 0 0 chr2 10981289 10981358 -239706496 + L1MB3 LINE L1 6107 6178 -5 312 236 109 86 chr2 10981573 10981643 -239706211 + L1ME4a LINE L1 5840 5907 -214 2453 77 3 3 chr2 10981643 10981953 -239705901 - AluY SINE Alu -1 310 1 312 236 109 86 chr2 10981953 10982056 -239705798 + L1ME4a LINE L1 5907 6017 -104 233 292 45 11 chr2 10982257 10982346 -239705508 + L3 LINE CR1 1483 1574 -3 619 255 71 38 chr2 10982725 10982909 -239704945 + MIR SINE MIR 1 190 -72 1706 89 114 8 chr2 10983947 10984183 -239703671 - AluSq SINE Alu -48 265 5 188 307 79 50 chr2 10984371 10984472 -239703382 + L2 LINE L2 3137 3240 -32 188 179 89 18 chr2 10984507 10984563 -239703291 + MIR SINE MIR 85 144 -64 494 267 67 39 chr2 10985029 10985209 -239702645 + MIR SINE MIR 49 233 -29 252 356 23 0 chr2 10985294 10985381 -239702473 + MIR SINE MIR 58 146 -116 2057 125 0 0 chr2 10985531 10985862 -239701992 - AluSx SINE Alu 0 331 1 2294 206 62 16 chr2 10987095 10987673 -239700181 - MER21B LTR ERV1 -58 805 201 352 149 9 167 chr2 10987895 10988009 -239699845 - MER21B LTR ERV1 -767 96 1 270 307 104 50 chr2 10988196 10988398 -239699456 - L2 LINE L2 -1047 2267 2055 180 0 0 0 chr2 10989182 10989202 -239698652 + (GTGTG)n Simple_repeat Simple_repeat 1 20 0 202 206 0 0 chr2 10989622 10989656 -239698198 + polypyrimidine Low_complexity Low_complexity 1 34 0 679 305 93 14 chr2 10989656 10990020 -239697834 - L1ME LINE L1 -392 5729 5337 355 276 55 24 chr2 10990917 10991044 -239696810 + MIR SINE MIR 3 133 -129 498 240 116 45 chr2 10991680 10992033 -239695821 + MLT1I LTR MaLR 3 407 -2 2066 119 3 48 chr2 10992128 10992438 -239695416 - AluSq SINE Alu -17 296 1 493 330 36 26 chr2 10992619 10992813 -239695041 - MIR SINE MIR -21 241 46 1664 143 87 3 chr2 10992909 10993195 -239694659 + AluJo SINE Alu 1 310 -2 291 323 108 54 chr2 10993196 10993419 -239694435 + L2 LINE L2 3036 3270 -2 1042 255 19 19 chr2 10993467 10993726 -239694128 + MIR SINE MIR 1 259 -3 295 268 175 0 chr2 10993854 10993951 -239693903 + MIR3 SINE MIR 2 115 -93 311 285 143 36 chr2 10995589 10996025 -239691829 - L1MC/D LINE L1 -315 5806 5317 2844 0 0 0 chr2 10996048 10996345 -239691509 - AluYa5 SINE Alu -14 297 1 221 333 0 27 chr2 10998383 10998458 -239689396 - MIR SINE MIR -120 88 16 2530 43 33 7 chr2 10998580 10998880 -239688974 - AluY SINE Alu -3 308 1 2291 103 0 0 chr2 10999334 10999634 -239688220 - AluY SINE Alu -11 300 1 1987 112 38 45 chr2 10999990 11000304 -239687550 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 11000942 11000967 -239686887 + GC_rich Low_complexity Low_complexity 1 25 0 217 73 24 24 chr2 11001099 11001140 -239686714 + (CGGGGG)n Simple_repeat Simple_repeat 1 41 0 622 313 66 28 chr2 11001762 11001978 -239685876 - L2 LINE L2 -235 3037 2831 1889 165 0 3 chr2 11001978 11002269 -239685585 - AluJo SINE Alu -22 290 1 622 313 66 28 chr2 11002269 11002515 -239685339 - L2 LINE L2 -441 2831 2480 276 279 13 13 chr2 11004511 11004590 -239683264 - L2 LINE L2 -44 3228 3150 220 209 224 0 chr2 11005310 11005377 -239682477 - MIR3 SINE MIR -21 187 106 805 144 14 7 chr2 11005377 11005516 -239682338 - MER7A DNA MER2_type -208 138 1 262 250 201 61 chr2 11005544 11005708 -239682146 + MIR SINE MIR 15 201 -61 272 61 0 0 chr2 11005802 11005840 -239682014 + FLAM_A SINE Alu 66 99 -34 535 105 35 35 chr2 11005840 11005855 -239681999 - AluJb SINE Alu -165 147 133 1590 86 5 0 chr2 11005855 11006082 -239681772 - AluY SINE Alu 0 311 84 535 105 35 35 chr2 11006082 11006151 -239681703 - AluJb SINE Alu -178 134 62 1831 158 0 11 chr2 11006945 11007268 -239680586 - AluSx SINE Alu 0 348 29 2785 176 4 23 chr2 11007284 11007801 -239680053 + MLT2B2 LTR ERVL 1 507 -8 1426 234 20 8 chr2 11007845 11008242 -239679612 - L1MEc LINE L1 -5455 941 540 461 203 155 35 chr2 11008248 11008480 -239679374 - MLT1F1 LTR MaLR -13 554 295 481 195 44 18 chr2 11009400 11009513 -239678341 - MER45A DNA AcHobo -4 174 59 232 236 146 24 chr2 11009557 11009680 -239678174 + L2 LINE L2 2953 3090 -182 384 308 112 83 chr2 11009938 11010404 -239677450 - L2 LINE L2 -181 3091 2580 1848 142 7 37 chr2 11010404 11010699 -239677155 + AluJb SINE Alu 3 288 -24 384 308 112 83 chr2 11010699 11011080 -239676774 - L2 LINE L2 -692 2580 2211 25 0 0 0 chr2 11011159 11011184 -239676670 + AT_rich Low_complexity Low_complexity 1 25 0 1899 186 96 26 chr2 11011345 11011682 -239676172 - MLT1D LTR MaLR -2 503 124 2505 83 39 30 chr2 11011682 11012043 -239675811 + THE1B LTR MaLR 1 364 0 1899 186 96 26 chr2 11012043 11012163 -239675691 - MLT1D LTR MaLR -381 124 14 1717 179 93 75 chr2 11012621 11012957 -239674897 + MLT2B1 LTR ERVL 1 350 -170 2332 113 3 3 chr2 11012957 11013267 -239674587 - AluSq SINE Alu -3 310 1 1717 179 93 75 chr2 11013267 11013433 -239674421 + MLT2B1 LTR ERVL 350 512 -8 248 289 16 66 chr2 11013577 11013698 -239674156 - MER5B DNA MER1_type -59 119 5 603 231 6 58 chr2 11014525 11014681 -239673173 - MER5A DNA MER1_type 0 189 42 184 250 119 24 chr2 11014694 11014778 -239673076 - MIR3 SINE MIR -27 181 90 203 310 56 0 chr2 11015807 11015878 -239671976 + MIR SINE MIR 174 248 -14 2540 137 3 3 chr2 11016044 11016408 -239671446 + THE1B LTR MaLR 1 364 0 1964 135 10 3 chr2 11017114 11017402 -239670452 + AluSx SINE Alu 1 290 -22 706 228 204 0 chr2 11017406 11017617 -239670237 - MIR SINE MIR 0 262 9 222 208 132 0 chr2 11017781 11017834 -239670020 + L2 LINE L2 3213 3272 0 1066 83 0 0 chr2 11017900 11018032 -239669822 + AluY SINE Alu 1 132 -179 536 15 0 0 chr2 11018035 11018101 -239669753 - L1PA5 LINE L1 -1962 4184 4119 10146 30 5 2 chr2 11018101 11020069 -239667785 + L1PA5 LINE L1 4169 6143 -11 225 140 70 0 chr2 11020082 11020139 -239667715 + A-rich Low_complexity Low_complexity 4 64 0 1322 103 6 0 chr2 11020261 11020436 -239667418 + AluY SINE Alu 119 294 -17 1537 124 62 4 chr2 11020499 11020756 -239667098 - Tigger3(Golem) DNA MER2_type 0 3029 2758 254 290 94 43 chr2 11022264 11022609 -239665245 - L2 LINE L2 -227 3086 2718 370 314 179 40 chr2 11022638 11022650 -239665204 - L2 LINE L2 -775 2539 2530 1718 139 45 35 chr2 11022650 11022938 -239664916 + AluJo SINE Alu 1 291 -21 370 314 179 40 chr2 11022938 11023148 -239664706 - L2 LINE L2 -784 2530 2286 235 331 41 0 chr2 11023171 11023292 -239664562 - L2 LINE L2 -1459 1855 1730 248 263 25 0 chr2 11023409 11023489 -239664365 - L1MC4 LINE L1 0 8042 7961 767 334 168 18 chr2 11023504 11024498 -239663356 - L2 LINE L2 -1612 1702 560 389 279 155 23 chr2 11024700 11024848 -239663006 + MIR SINE MIR 14 202 -60 2684 135 31 2 chr2 11024848 11025262 -239662592 - MSTB LTR MaLR 0 426 1 389 279 155 23 chr2 11025262 11025332 -239662522 + MIR SINE MIR 202 261 -1 2384 144 0 6 chr2 11025539 11025878 -239661976 - MER1B DNA MER1_type 0 337 1 1359 192 39 88 chr2 11026302 11026575 -239661279 + MLT1B LTR MaLR 4 252 -138 2115 119 68 34 chr2 11026575 11026638 -239661216 - THE1B LTR MaLR 0 364 305 1918 121 13 64 chr2 11026638 11026952 -239660902 + AluSx SINE Alu 1 298 -14 2115 119 68 34 chr2 11026952 11027240 -239660614 - THE1B LTR MaLR -59 305 1 1359 192 39 88 chr2 11027240 11027373 -239660481 + MLT1B LTR MaLR 252 390 0 229 260 0 41 chr2 11027475 11027548 -239660306 + L2 LINE L2 3015 3084 -188 530 236 39 48 chr2 11027726 11027934 -239659920 + L2 LINE L2 3108 3313 0 291 256 22 0 chr2 11028672 11028762 -239659092 + MIR SINE MIR 60 151 -111 182 225 0 0 chr2 11028789 11028829 -239659025 + MIR SINE MIR 216 255 -7 297 0 0 0 chr2 11029799 11029832 -239658022 + (TG)n Simple_repeat Simple_repeat 2 34 0 256 172 35 0 chr2 11030702 11030760 -239657094 + MIR SINE MIR 89 148 -114 291 157 0 0 chr2 11031136 11031187 -239656667 + T-rich Low_complexity Low_complexity 1 51 0 562 339 25 29 chr2 11031977 11032254 -239655600 + HERVL LTR ERVL 4739 5014 -640 2226 122 23 0 chr2 11032254 11032557 -239655297 + AluSx SINE Alu 1 310 -2 920 223 110 43 chr2 11033101 11033446 -239654408 + LTR16A1 LTR ERVL 90 457 0 1572 199 41 33 chr2 11033894 11034116 -239653738 - MLT1A1 LTR MaLR 0 365 137 1927 141 44 44 chr2 11034116 11034479 -239653375 + THE1B LTR MaLR 1 363 -1 1572 199 41 33 chr2 11034479 11034618 -239653236 - MLT1A1 LTR MaLR -228 137 1 395 271 132 0 chr2 11034825 11034969 -239652885 - MIR SINE MIR -11 251 89 1004 215 121 69 chr2 11035016 11035421 -239652433 - MLT1H LTR MaLR 0 549 124 393 207 122 63 chr2 11035560 11035831 -239652023 - L1ME4a LINE L1 -23 6098 5812 2363 83 0 0 chr2 11036765 11037055 -239650799 + AluY SINE Alu 1 290 -21 202 214 14 57 chr2 11037750 11037820 -239650034 + GA-rich Low_complexity Low_complexity 1 67 0 2435 72 3 0 chr2 11038370 11038677 -239649177 + AluYa5 SINE Alu 1 308 -3 184 312 43 36 chr2 11039579 11039717 -239648137 + L2 LINE L2 2684 2822 -492 2678 209 149 66 chr2 11040081 11041217 -239646637 - L1MC4a LINE L1 -155 7653 6424 320 182 0 30 chr2 11041217 11041283 -239646571 - MER2 DNA MER2_type 0 345 282 * 337 203 13 38 chr2 11041256 11041335 -239646519 - MER8 DNA MER2_type -60 179 103 587 272 48 37 chr2 11041356 11041624 -239646230 - L1MC3 LINE L1 -1454 6331 6061 809 217 81 72 chr2 11041633 11041787 -239646067 - L1MCc LINE L1 -4034 3088 2937 1634 165 36 11 chr2 11041787 11042066 -239645788 - AluJb SINE Alu -26 286 1 809 217 81 72 chr2 11042066 11042257 -239645597 - L1MCc LINE L1 -4185 2937 2740 * 1653 93 4 0 chr2 11042244 11042480 -239645374 - L1P LINE L1 -846 5300 5064 1843 53 4 29 chr2 11042480 11042724 -239645130 + L1PA8 LINE L1 5934 6171 -1 327 320 92 7 chr2 11042726 11042879 -239644975 - L1MCc LINE L1 -4366 2756 2591 901 254 5 20 chr2 11042881 11043082 -239644772 + MER58A DNA MER1_type 3 200 -24 335 180 26 203 chr2 11043086 11043397 -239644457 - L1MCc LINE L1 -4870 2102 1826 1323 227 80 75 chr2 11043435 11044432 -239643422 - L1MCc LINE L1 -4914 1509 821 6814 63 10 27 chr2 11044467 11045509 -239642345 - L1PA8 LINE L1 -16 6156 5111 830 244 29 29 chr2 11045517 11045763 -239642091 - Charlie4 DNA MER1_type -1698 263 18 283 223 54 95 chr2 11045861 11046009 -239641845 + MIR SINE MIR 110 251 -11 276 30 0 0 chr2 11046270 11046303 -239641551 + (TC)n Simple_repeat Simple_repeat 2 34 0 216 67 0 0 chr2 11046302 11046332 -239641522 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 2113 123 14 0 chr2 11046890 11047182 -239640672 - AluSx SINE Alu -16 296 1 345 312 9 9 chr2 11047318 11047427 -239640427 - MIR SINE MIR -81 127 19 2442 186 53 28 chr2 11047759 11048301 -239639553 - MER67C LTR ERV1 -153 557 2 2481 86 0 0 chr2 11048400 11048701 -239639153 + AluSx SINE Alu 1 301 -11 1623 186 46 25 chr2 11049618 11049984 -239637870 - MLT1A2 LTR MaLR 0 374 1 7460 45 3 1 chr2 11050472 11051786 -239636068 + L1PA7 LINE L1 4838 6154 0 1034 233 137 22 chr2 11051873 11052319 -239635535 + L1MEc LINE L1 36 532 -5864 462 264 66 47 chr2 11052346 11052604 -239635250 + MLT1F1 LTR MaLR 16 278 -289 335 158 20 48 chr2 11052959 11053105 -239634749 + C-rich Low_complexity Low_complexity 3 144 0 614 305 88 44 chr2 11053182 11053681 -239634173 + LTR33 LTR ERVL 1 521 0 225 325 13 0 chr2 11053793 11053870 -239633984 - L3 LINE CR1 -440 1137 1060 1965 204 71 14 chr2 11053870 11054379 -239633475 - MER67A LTR ERV1 0 543 6 268 328 25 17 chr2 11054735 11054854 -239633000 + CT-rich Low_complexity Low_complexity 5 124 0 327 288 27 18 chr2 11056275 11056386 -239631468 + MIR SINE MIR 36 147 -61 196 317 0 0 chr2 11056562 11056622 -239631232 - MIR3 SINE MIR -5 203 144 183 286 43 29 chr2 11056692 11056762 -239631092 + MIR SINE MIR 72 142 -66 2054 136 3 3 chr2 11056932 11057249 -239630605 - AluSg SINE Alu 0 310 3 198 295 267 23 chr2 11057272 11057489 -239630365 - L3 LINE CR1 -222 1355 1086 1975 69 8 2 chr2 11057510 11057775 -239630079 - L1MC/D LINE L1 -598 5556 5320 180 333 0 0 chr2 11058216 11058264 -239629590 + MIR SINE MIR 84 131 -77 2137 118 0 20 chr2 11058272 11058578 -239629276 - AluY SINE Alu -11 300 1 491 237 129 46 chr2 11058939 11059133 -239628721 - MIR SINE MIR -1 261 52 44678 43 5 2 chr2 11059305 11065446 -239622408 - L1PA4 LINE L1 0 6155 1 2222 127 3 0 chr2 11065449 11065757 -239622097 - AluSc SINE Alu 0 309 1 297 0 0 0 chr2 11066066 11066099 -239621755 + (TG)n Simple_repeat Simple_repeat 2 34 0 37 62 0 0 chr2 11066232 11066297 -239621557 + AT_rich Low_complexity Low_complexity 1 65 0 294 314 81 33 chr2 11066997 11067207 -239620647 + HAL1b LINE L1 310 529 -819 189 315 16 55 chr2 11067813 11067940 -239619914 + MIR SINE MIR 138 259 -3 269 309 34 40 chr2 11068510 11068659 -239619195 + MIR SINE MIR 38 185 -77 367 292 33 30 chr2 11068972 11069162 -239618692 + MIR SINE MIR 27 212 -50 1297 164 72 23 chr2 11069265 11069569 -239618285 + LTR37A LTR ERV1 87 405 -21 432 0 0 0 chr2 11070258 11070306 -239617548 + (CA)n Simple_repeat Simple_repeat 1 48 0 2018 183 19 19 chr2 11070410 11070777 -239617077 + MLT2D LTR ERVL 3 369 -45 343 239 0 83 chr2 11072633 11072742 -239615112 - MER5B DNA MER1_type -78 100 1 606 163 34 88 chr2 11073025 11073127 -239614727 - L1MA7 LINE L1 -58 6233 6138 1906 147 0 11 chr2 11073127 11073434 -239614420 + AluSx SINE Alu 1 304 0 606 163 34 88 chr2 11073434 11073476 -239614378 - L1MA7 LINE L1 -153 6138 6095 261 183 0 61 chr2 11073479 11073561 -239614293 + L1MA8 LINE L1 6211 6287 -4 724 285 64 26 chr2 11074674 11074872 -239612982 - L2 LINE L2 -1313 2001 1812 1702 205 36 0 chr2 11074872 11075203 -239612651 + MER2 DNA MER2_type 1 343 -1 724 285 64 26 chr2 11075203 11075425 -239612429 - L2 LINE L2 -1502 1812 1565 182 194 15 0 chr2 11075708 11075775 -239612079 + (CA)n Simple_repeat Simple_repeat 2 69 0 340 263 105 60 chr2 11075802 11076068 -239611786 + HAL1 LINE L1 777 1054 -1453 360 331 115 41 chr2 11076074 11076412 -239611442 + HAL1 LINE L1 1750 2112 -395 435 263 71 53 chr2 11076429 11076695 -239611159 + HAL1 LINE L1 2235 2505 -2 219 329 0 13 chr2 11076725 11076801 -239611053 + GA-rich Low_complexity Low_complexity 2 76 0 750 306 34 0 chr2 11077264 11077529 -239610325 + L2 LINE L2 2137 2410 -904 389 296 129 34 chr2 11077597 11077830 -239610024 + L2 LINE L2 2991 3245 -68 309 290 74 31 chr2 11077909 11078172 -239609682 - MLT1I LTR MaLR -69 381 64 293 323 86 0 chr2 11079014 11079107 -239608747 + MIR SINE MIR 57 157 -105 2214 121 0 22 chr2 11079302 11079617 -239608237 + AluSg SINE Alu 1 308 -2 266 349 92 13 chr2 11079817 11079969 -239607885 + Tigger8 DNA MER2_type 1 164 -502 1943 120 62 17 chr2 11081136 11081427 -239606427 - AluSx SINE Alu -8 304 1 23 33 0 0 chr2 11081507 11081537 -239606317 + AT_rich Low_complexity Low_complexity 1 30 0 195 146 0 0 chr2 11082367 11082408 -239605446 + (CA)n Simple_repeat Simple_repeat 1 41 0 706 212 88 6 chr2 11082730 11082900 -239604954 - MER5A DNA MER1_type -3 186 3 1068 144 11 29 chr2 11083450 11083624 -239604230 + FRAM SINE Alu 1 162 -14 2340 95 0 13 chr2 11083732 11084037 -239603817 - AluSq SINE Alu -12 301 1 661 99 0 0 chr2 11086043 11086134 -239601720 - AluSg/x SINE Alu -6 306 216 21 0 0 0 chr2 11086143 11086164 -239601690 + AT_rich Low_complexity Low_complexity 1 21 0 582 296 94 22 chr2 11088348 11088571 -239599283 + MIR SINE MIR 6 244 -18 199 273 195 47 chr2 11088601 11088729 -239599125 + MIR3 SINE MIR 13 159 -49 181 284 42 42 chr2 11089700 11089795 -239598059 - L3 LINE CR1 -5 1572 1478 1714 110 138 37 chr2 11089853 11090107 -239597747 + THE1B LTR MaLR 1 297 -67 2148 114 3 62 chr2 11090107 11090432 -239597422 - AluSx SINE Alu -6 306 1 1714 110 138 37 chr2 11090432 11090503 -239597351 + THE1B LTR MaLR 297 359 -5 2370 92 0 0 chr2 11091053 11091346 -239596508 - AluSx SINE Alu -19 293 1 276 262 12 24 chr2 11092470 11092554 -239595300 + MIR3 SINE MIR 110 192 -16 1269 267 125 71 chr2 11093493 11093639 -239594215 + L1MC4a LINE L1 3600 3737 -2409 285 29 0 0 chr2 11093639 11093673 -239594181 + (TG)n Simple_repeat Simple_repeat 2 35 0 1269 267 125 71 chr2 11093673 11094748 -239593106 + L1MC4a LINE L1 3737 4915 -1231 2417 70 6 16 chr2 11094748 11095061 -239592793 - AluY SINE Alu -1 310 1 1269 267 125 71 chr2 11095061 11095292 -239592562 + L1MC4a LINE L1 4915 5132 -1014 3382 54 0 5 chr2 11095532 11095961 -239591893 + L1PA8 LINE L1 5746 6172 0 228 272 20 82 chr2 11097028 11097175 -239590679 - L2 LINE L2 -225 3047 2910 859 336 34 26 chr2 11097571 11098065 -239589789 + L2 LINE L2 1733 2230 -1084 2354 105 3 0 chr2 11098115 11098421 -239589433 - AluSx SINE Alu -5 307 1 301 229 12 0 chr2 11098445 11098528 -239589326 + Charlie5 DNA MER1_type 2354 2437 -175 447 161 18 18 chr2 11098671 11098783 -239589071 + Charlie5 DNA MER1_type 2385 2496 -116 1103 275 91 63 chr2 11098783 11099852 -239588002 + L2 LINE L2 2209 3313 0 2501 80 0 0 chr2 11100047 11100349 -239587505 - AluSc SINE Alu -7 302 1 265 280 97 0 chr2 11101318 11101411 -239586443 - MER20 DNA MER1_type -80 139 38 187 238 191 48 chr2 11101873 11101957 -239585897 + L2 LINE L2 3180 3275 -38 447 275 48 53 chr2 11102041 11102230 -239585624 - MIR3 SINE MIR -7 201 14 2381 85 3 0 chr2 11102338 11102631 -239585223 + AluSq SINE Alu 1 294 -19 2156 119 10 0 chr2 11103167 11103462 -239584392 - AluSx SINE Alu -14 298 1 23 0 0 0 chr2 11104525 11104548 -239583306 + AT_rich Low_complexity Low_complexity 1 23 0 709 282 8 103 chr2 11104749 11105118 -239582736 + L1MC4a LINE L1 5497 5830 -1978 755 141 0 41 chr2 11105471 11105592 -239582262 - FLAM_A SINE Alu -14 128 13 260 358 83 0 chr2 11105651 11105771 -239582083 + L2 LINE L2 3143 3272 0 207 355 50 8 chr2 11106212 11106333 -239581521 + MIR SINE MIR 79 204 -58 5616 120 10 24 chr2 11110136 11111058 -239576796 - L1MA4 LINE L1 0 6300 5392 958 208 26 9 chr2 11111056 11111282 -239576572 + L1MA4 LINE L1 5136 5365 -781 * 1383 152 9 0 chr2 11111443 11111654 -239576200 + AluSg/x SINE Alu 83 295 -15 242 314 73 58 chr2 11112148 11112285 -239575569 + MIR3 SINE MIR 11 149 -59 323 151 163 35 chr2 11112400 11112486 -239575368 + MIR3 SINE MIR 109 205 -3 1500 118 47 40 chr2 11113803 11114125 -239573729 - THE1C LTR MaLR 0 375 52 2470 107 24 8 chr2 11114232 11114607 -239573247 - THE1C-int LTR MaLR -16 1564 1184 321 203 116 0 chr2 11114792 11114861 -239572993 - MIR SINE MIR -103 159 83 256 332 0 13 chr2 11115136 11115242 -239572612 - MIR SINE MIR -89 119 17 262 348 80 50 chr2 11116312 11116513 -239571341 - MIR SINE MIR -4 258 52 442 299 138 0 chr2 11117185 11117359 -239570495 + MIR SINE MIR 41 238 -24 288 330 54 43 chr2 11118162 11118347 -239569507 - L2 LINE L2 -10 3303 3117 635 337 209 16 chr2 11118448 11119275 -239568579 - L2 LINE L2 -351 2963 1977 1905 156 7 0 chr2 11119413 11119702 -239568152 + AluSx SINE Alu 3 293 -19 317 283 71 15 chr2 11120848 11121046 -239566808 + L1M4 LINE L1 4628 4836 -1310 448 265 83 17 chr2 11121171 11121352 -239566502 + MLT1L LTR MaLR 39 231 -384 226 283 170 0 chr2 11121465 11121571 -239566283 + MLT1L LTR MaLR 485 608 -7 301 322 96 29 chr2 11121719 11121927 -239565927 + L1M4 LINE L1 5040 5261 -885 325 269 113 38 chr2 11122029 11122189 -239565665 + L1MEd LINE L1 546 717 -5402 594 256 0 0 chr2 11122189 11122510 -239565344 + (CA)n Simple_repeat Simple_repeat 1 321 0 2323 82 13 0 chr2 11123808 11124111 -239563743 - AluY SINE Alu -4 307 1 644 132 25 0 chr2 11124181 11124302 -239563552 - L1MB4 LINE L1 0 6180 6057 383 308 107 0 chr2 11124590 11124759 -239563095 + MIR SINE MIR 24 210 -52 2366 96 3 0 chr2 11127018 11127320 -239560534 - AluSx SINE Alu -9 303 1 227 296 41 51 chr2 11128000 11128098 -239559756 + MIR3 SINE MIR 103 199 -9 368 186 14 0 chr2 11128860 11128930 -239558924 + L1ME3A LINE L1 5788 5858 -312 667 203 65 55 chr2 11128931 11129148 -239558706 + L1ME3A LINE L1 5942 6160 -10 216 97 0 0 chr2 11129630 11129661 -239558193 + (CTCA)n Simple_repeat Simple_repeat 1 31 0 525 277 110 7 chr2 11129939 11130158 -239557696 - MIR SINE MIR -10 252 16 2207 100 0 0 chr2 11130593 11130892 -239556962 + AluSx SINE Alu 1 299 -13 807 265 62 0 chr2 11133046 11133257 -239554597 - MER58A DNA MER1_type 0 224 1 319 173 34 45 chr2 11134765 11134944 -239552910 + (TA)n Simple_repeat Simple_repeat 1 177 0 1368 189 9 39 chr2 11135552 11135885 -239551969 + MER33 DNA MER1_type 1 323 -1 535 209 43 35 chr2 11136213 11136416 -239551438 - MER106A DNA MER1_type 0 236 3 3418 119 50 4 chr2 11138479 11138982 -239548872 + MER1A DNA MER1_type 2 527 0 3795 175 43 59 chr2 11141043 11141352 -239546502 + L1MB8 LINE L1 5036 5348 -830 204 40 0 0 chr2 11141352 11141377 -239546477 + (CA)n Simple_repeat Simple_repeat 2 26 0 3795 175 43 59 chr2 11141377 11141809 -239546045 + L1MB8 LINE L1 5348 5742 -436 2431 68 0 0 chr2 11141809 11142119 -239545735 - AluY SINE Alu -1 310 1 3795 175 43 59 chr2 11142119 11142548 -239545306 + L1MB8 LINE L1 5742 6176 -2 420 110 0 132 chr2 11143244 11143335 -239544519 - MADE1 DNA Mariner -1 79 1 335 326 65 0 chr2 11143337 11143475 -239544379 - MIR3 SINE MIR -29 179 33 1162 243 127 57 chr2 11143655 11143739 -239544115 + MLT1G1 LTR MaLR 1 78 -515 3118 182 102 5 chr2 11143739 11143976 -239543878 + MER72 LTR ERV1 5 217 -505 278 0 54 0 chr2 11143976 11144013 -239543841 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3118 182 102 5 chr2 11144013 11144429 -239543425 + MER72 LTR ERV1 217 722 0 1162 243 127 57 chr2 11144429 11144882 -239542972 + MLT1G1 LTR MaLR 78 588 -5 204 250 100 25 chr2 11146231 11146327 -239541527 - L2 LINE L2 -56 3257 3149 1529 170 22 7 chr2 11146327 11146598 -239541256 + AluJb SINE Alu 1 275 -37 204 250 100 25 chr2 11146598 11146621 -239541233 - L2 LINE L2 -164 3149 3129 234 0 0 0 chr2 11146669 11146695 -239541159 + (TA)n Simple_repeat Simple_repeat 1 26 0 299 164 77 87 chr2 11197129 11197233 -239490621 + MIR SINE MIR 124 226 -36 225 317 43 61 chr2 11197305 11197535 -239490319 + MIR SINE MIR 27 252 -10 1304 174 9 0 chr2 11197648 11197861 -239489993 - AluJb SINE Alu -12 300 86 1397 159 145 64 chr2 11198006 11198365 -239489489 - MLT1B LTR MaLR 0 390 3 784 174 39 13 chr2 11198433 11198588 -239489266 + MLT1B LTR MaLR 232 390 0 2000 149 0 7 chr2 11201528 11201829 -239486025 - AluSg SINE Alu -11 299 1 309 233 44 0 chr2 11201931 11202021 -239485833 + LTR50 LTR ERVL 702 795 0 604 275 17 26 chr2 11202038 11202271 -239485583 - L1M4 LINE L1 -3705 2441 2211 24 0 0 0 chr2 11203216 11203240 -239484614 + AT_rich Low_complexity Low_complexity 1 24 0 423 261 156 0 chr2 11203600 11203762 -239484092 + MIR SINE MIR 7 192 -70 3247 141 125 29 chr2 11203944 11204598 -239483256 + LTR62 LTR ERVK 1 717 -2 634 274 34 26 chr2 11206320 11206554 -239481300 + MIR SINE MIR 21 256 -6 257 342 46 7 chr2 11207280 11207432 -239480422 - MIR SINE MIR -6 256 99 283 204 177 53 chr2 11207727 11207953 -239479901 + L2 LINE L2 2383 2636 -678 1614 218 32 41 chr2 11207968 11208409 -239479445 + MER101 LTR ERV1 11 447 -27 934 252 147 42 chr2 11208506 11208934 -239478920 - L2 LINE L2 0 3313 2841 290 274 105 48 chr2 11209009 11209133 -239478721 - MIR SINE MIR -51 211 81 408 274 22 7 chr2 11209441 11209576 -239478278 - MIR3 SINE MIR -26 182 46 979 220 56 60 chr2 11209755 11210197 -239477657 + MLT1D LTR MaLR 3 498 -7 390 255 183 0 chr2 11211361 11211509 -239476345 + MIR SINE MIR 75 248 -14 208 214 0 0 chr2 11211573 11211615 -239476239 - MIR SINE MIR -103 159 118 1727 182 63 17 chr2 11212154 11212501 -239475353 + MLT1B LTR MaLR 28 390 0 387 283 40 7 chr2 11212536 11212688 -239475166 + MIR SINE MIR 106 262 0 2377 107 0 7 chr2 11213437 11213746 -239474108 - AluSx SINE Alu -5 307 1 218 95 24 0 chr2 11214910 11214952 -239472902 + (TG)n Simple_repeat Simple_repeat 2 44 0 2193 165 22 3 chr2 11214957 11215315 -239472539 - MLT1A1 LTR MaLR 0 365 1 847 112 12 18 chr2 11215378 11215547 -239472307 + (TAGA)n Simple_repeat Simple_repeat 4 171 0 228 275 11 44 chr2 11216369 11216460 -239471394 - MER103 DNA DNA -59 107 20 309 239 92 18 chr2 11216639 11216748 -239471106 + MIR SINE MIR 74 190 -72 2271 208 50 13 chr2 11217913 11218451 -239469403 + MER74A LTR ERVL 1 558 0 221 309 73 41 chr2 11219061 11219281 -239468573 + L2 LINE L2 1325 1551 -1763 1836 164 7 10 chr2 11219429 11219727 -239468127 + AluSx SINE Alu 1 297 -15 231 243 63 27 chr2 11220553 11220664 -239467190 + L1ME LINE L1 5746 5860 -261 1404 187 159 6 chr2 11220673 11220988 -239466866 + MLT1A1 LTR MaLR 3 365 0 182 211 53 0 chr2 11221207 11221245 -239466609 - L2 LINE L2 -23 3249 3210 188 167 296 0 chr2 11221411 11221465 -239466389 - L2 LINE L2 -3 3310 3241 2072 115 81 16 chr2 11221511 11221832 -239466022 + MER61A LTR ERV1 2 343 0 535 198 86 19 chr2 11222139 11222301 -239465553 - MIR SINE MIR -50 212 40 2172 98 7 0 chr2 11222301 11222578 -239465276 + AluSq SINE Alu 24 302 -11 184 333 0 49 chr2 11222653 11222734 -239465120 - MIR SINE MIR -147 115 39 222 247 86 0 chr2 11222823 11222904 -239464950 - MIR SINE MIR -13 249 162 1359 123 4 25 chr2 11223667 11223902 -239463952 - AluY SINE Alu -81 230 1 451 258 58 21 chr2 11223998 11224188 -239463666 + L2 LINE L2 3081 3277 -36 488 250 277 57 chr2 11224424 11224760 -239463094 + MLT1H LTR MaLR 123 532 -17 222 300 40 20 chr2 11224862 11224962 -239462892 - MIR SINE MIR -5 257 156 573 227 60 100 chr2 11225012 11225263 -239462591 + MIR SINE MIR 13 253 -9 337 271 98 8 chr2 11225300 11225433 -239462421 - MIR SINE MIR -48 214 70 2027 126 10 3 chr2 11225439 11225732 -239462122 + AluSx SINE Alu 1 295 -17 746 158 0 8 chr2 11225615 11225735 -239462119 + AluSg/x SINE Alu 180 298 -14 323 333 98 0 chr2 11226514 11226646 -239461208 + L2 LINE L2 3122 3266 -6 583 235 15 0 chr2 11228436 11228568 -239459286 - ERVL LTR ERVL -3592 2172 2039 399 211 22 0 chr2 11228570 11228660 -239459194 - ERVL LTR ERVL -3640 2124 2033 * 4993 241 25 5 chr2 11228659 11229764 -239458090 - ERVL LTR ERVL -3642 2122 996 1194 212 126 62 chr2 11230081 11230453 -239457401 - MSTD LTR MaLR 0 396 1 1917 204 15 33 chr2 11230572 11230969 -239456885 - MLT1B LTR MaLR 0 390 1 301 344 70 16 chr2 11231475 11231661 -239456193 - MIR SINE MIR -47 215 20 1738 164 21 11 chr2 11232183 11232469 -239455385 - AluJo SINE Alu -23 289 1 355 239 142 81 chr2 11233014 11233211 -239454643 + MER3 DNA MER1_type 1 209 0 * 571 242 99 37 chr2 11233062 11233223 -239454631 - MER3 DNA MER1_type -3 206 36 365 347 34 82 chr2 11233860 11234154 -239453700 - L2 LINE L2 -1 3271 2992 560 256 28 40 chr2 11234363 11234539 -239453315 - MER77 LTR ERV1 -35 570 397 216 225 0 0 chr2 11234549 11234589 -239453265 + T-rich Low_complexity Low_complexity 1 40 0 2276 105 3 13 chr2 11234592 11234907 -239452947 - AluSx SINE Alu 0 312 1 1122 231 19 115 chr2 11234915 11235334 -239452520 - MER77 LTR ERV1 -217 388 10 295 154 154 39 chr2 11235355 11235433 -239452421 - L1M4 LINE L1 -1498 4648 4562 877 132 69 6 chr2 11235464 11235623 -239452231 - AluSx SINE Alu -20 289 121 921 145 0 0 chr2 11235738 11235869 -239451985 - AluSx SINE Alu -181 131 1 2221 114 7 0 chr2 11235943 11236232 -239451622 - AluSx SINE Alu -21 291 1 250 258 56 11 chr2 11236383 11236472 -239451382 - L1M4 LINE L1 -1828 4318 4226 1760 215 134 5 chr2 11236477 11236918 -239450936 - MLT1D LTR MaLR -2 503 6 413 283 85 46 chr2 11236920 11237227 -239450627 - L1M4 LINE L1 -1916 4230 3912 226 234 99 18 chr2 11237335 11237446 -239450408 - MLT1H1 LTR MaLR -124 431 312 323 262 37 80 chr2 11239098 11239224 -239448630 + MER5A DNA MER1_type 4 121 -68 2009 141 7 3 chr2 11239224 11239522 -239448332 - AluJb SINE Alu -13 299 1 323 262 37 80 chr2 11239522 11239582 -239448272 + MER5A DNA MER1_type 121 182 -7 2238 145 90 0 chr2 11240154 11240533 -239447321 - MLT2C2 LTR ERVL -51 413 1 2677 39 0 3 chr2 11240631 11240941 -239446913 + AluY SINE Alu 1 309 -2 463 200 85 54 chr2 11241804 11241934 -239445920 - MIR SINE MIR -50 212 79 1759 168 3 29 chr2 11242131 11242441 -239445413 + AluJb SINE Alu 1 302 -10 531 248 12 56 chr2 11242903 11243064 -239444790 - MER63A DNA MER1_type 0 210 57 3265 67 11 61 chr2 11243216 11243500 -239444354 - L1PB1 LINE L1 -4 6147 5893 2179 89 0 24 chr2 11243500 11243793 -239444061 + AluSx SINE Alu 1 286 -26 3265 67 11 61 chr2 11243793 11243969 -239443885 - L1PB1 LINE L1 -258 5893 5710 2278 93 0 10 chr2 11244056 11244356 -239443498 + AluY SINE Alu 1 297 -14 226 363 116 14 chr2 11244546 11244692 -239443162 + L2 LINE L2 3107 3267 -5 434 264 10 1 chr2 11245271 11245381 -239442473 + MIR SINE MIR 35 143 -67 315 336 66 8 chr2 11246083 11246205 -239441649 - MIR SINE MIR -113 149 21 209 338 0 26 chr2 11246218 11246295 -239441559 + MIR SINE MIR 108 182 -80 301 257 230 9 chr2 11246743 11246856 -239440998 + MIR SINE MIR 69 206 -56 283 247 0 24 chr2 11248276 11248361 -239439493 + L2 LINE L2 2983 3065 -207 283 316 140 0 chr2 11248655 11248769 -239439085 + L2 LINE L2 3138 3267 -5 583 261 46 7 chr2 11248814 11248967 -239438887 + MIR SINE MIR 31 189 -73 405 307 189 17 chr2 11249606 11249844 -239438010 - L3 LINE CR1 -139 1438 1160 293 297 26 87 chr2 11250393 11250622 -239437232 - L3 LINE CR1 -567 1010 796 400 233 157 19 chr2 11251307 11251466 -239436388 - MIR SINE MIR -1 261 81 405 302 39 44 chr2 11251523 11251705 -239436149 - MIR3 SINE MIR -9 199 19 2005 189 17 3 chr2 11252057 11252407 -239435447 - THE1A LTR MaLR 0 355 1 195 273 18 0 chr2 11252797 11252852 -239435002 - MIR SINE MIR -56 206 151 2276 69 0 21 chr2 11253330 11253651 -239434203 + AluY SINE Alu 1 315 0 2202 163 26 16 chr2 11254506 11254892 -239432962 - MLT1B LTR MaLR 0 390 1 3799 210 28 67 chr2 11254893 11256199 -239431655 - MLT1B-int LTR MaLR -1 1370 2 265 88 0 0 chr2 11256200 11256234 -239431620 - MLT2D LTR ERVL 0 520 487 * 417 143 0 0 chr2 11256231 11256294 -239431560 + Tigger2 DNA MER2_type 7 69 -2649 267 105 0 0 chr2 11256292 11256330 -239431524 + Tigger2 DNA MER2_type 2280 2317 -401 * 1026 206 31 5 chr2 11256349 11256543 -239431311 - MLT2D LTR ERVL -94 320 122 2681 140 7 74 chr2 11257735 11257807 -239430047 - MSTB LTR MaLR 0 426 351 2349 75 3 35 chr2 11257807 11258126 -239429728 + AluY SINE Alu 1 309 -2 2681 140 7 74 chr2 11258126 11258510 -239429344 - MSTB LTR MaLR -75 351 1 228 208 125 28 chr2 11258787 11258859 -239428995 + L2 LINE L2 2992 3070 -202 243 0 0 0 chr2 11259315 11259342 -239428512 + (A)n Simple_repeat Simple_repeat 1 27 0 349 268 31 0 chr2 11259521 11259618 -239428236 - MIR SINE MIR -155 107 8 * 371 340 70 51 chr2 11259585 11260000 -239427854 + L2 LINE L2 2247 2669 -645 553 157 0 0 chr2 11260092 11260175 -239427679 + AluSg/x SINE Alu 217 299 -11 2453 88 0 0 chr2 11260179 11260486 -239427368 + AluY SINE Alu 1 307 -4 343 315 195 25 chr2 11260530 11260730 -239427124 + MIR SINE MIR 20 253 -9 2202 120 0 0 chr2 11261060 11261359 -239426495 + AluSx SINE Alu 1 299 -13 3160 144 44 4 chr2 11261396 11261874 -239425980 - LOR1a LTR ERV1 0 497 1 569 301 47 10 chr2 11262150 11262343 -239425511 - MIR SINE MIR 0 262 63 285 165 21 134 chr2 11262415 11262512 -239425342 + MER112 DNA MER1_type 2 87 -173 1936 168 0 0 chr2 11262515 11262812 -239425042 - AluJb SINE Alu -15 297 1 404 254 62 72 chr2 11264384 11264430 -239423424 - MIR SINE MIR -69 193 148 2443 130 24 11 chr2 11264430 11264799 -239423055 - THE1C LTR MaLR -1 374 1 404 254 62 72 chr2 11264799 11264945 -239422909 - MIR SINE MIR -114 148 3 2347 122 30 73 chr2 11264959 11265320 -239422534 - L1MA5A LINE L1 -5 6292 5954 2026 150 0 0 chr2 11265320 11265633 -239422221 - AluSq SINE Alu 0 313 1 2347 122 30 73 chr2 11265633 11265738 -239422116 - L1MA5A LINE L1 -343 5954 5846 2880 226 91 8 chr2 11266017 11267230 -239420624 + L1ME2 LINE L1 4666 5998 -166 2326 157 76 40 chr2 11267230 11267675 -239420179 + LOR1b LTR ERV1 1 461 0 2880 226 91 8 chr2 11267675 11267844 -239420010 + L1ME2 LINE L1 5998 6151 -13 1387 255 103 18 chr2 11267857 11268594 -239419260 + L1ME3A LINE L1 5152 5949 -221 2131 100 40 3 chr2 11268814 11269114 -239418740 - AluSx SINE Alu -1 311 1 385 220 44 13 chr2 11269754 11269913 -239417941 + (TA)n Simple_repeat Simple_repeat 1 164 0 207 176 78 39 chr2 11271034 11271046 -239416808 + MIR SINE MIR 85 95 -113 2633 88 30 11 chr2 11271046 11271410 -239416444 - THE1C LTR MaLR -4 371 1 207 176 78 39 chr2 11271410 11271448 -239416406 + MIR SINE MIR 95 137 -71 279 258 194 0 chr2 11271454 11271547 -239416307 - L2 LINE L2 -5 3308 3198 2717 142 60 39 chr2 11271547 11272033 -239415821 - LOR1a LTR ERV1 0 497 2 190 228 132 70 chr2 11272166 11272280 -239415574 + MIR SINE MIR 142 262 0 445 252 0 32 chr2 11272414 11272537 -239415317 - MER5A DNA MER1_type -39 150 32 22 56 0 0 chr2 11274051 11274087 -239413767 + AT_rich Low_complexity Low_complexity 1 36 0 333 255 185 32 chr2 11274143 11274300 -239413554 - MIR SINE MIR -62 200 20 198 309 217 0 chr2 11274619 11274849 -239413005 - L2 LINE L2 -533 2781 2502 352 319 77 11 chr2 11275784 11275966 -239411888 + MIR SINE MIR 19 212 -50 222 310 69 0 chr2 11276121 11276179 -239411675 - L2 LINE L2 -1 3271 3210 6904 147 43 6 chr2 11276754 11278624 -239409230 + L1PA11 LINE L1 4263 6174 0 2344 141 14 3 chr2 11278624 11278971 -239408883 + L1PA15 LINE L1 5797 6147 -18 264 88 0 0 chr2 11279023 11279057 -239408797 - U2 snRNA snRNA -154 34 1 477 237 15 38 chr2 11279367 11279498 -239408356 - L1M2c LINE L1 -4652 2137 2010 580 204 81 65 chr2 11281465 11281651 -239406203 - MER53 DNA DNA 0 189 1 237 328 60 0 chr2 11282696 11282812 -239405042 - MIR SINE MIR -139 123 1 2185 119 3 0 chr2 11283036 11283338 -239404516 + AluSx SINE Alu 1 303 -9 819 242 119 40 chr2 11283417 11283578 -239404276 - MLT1J2 LTR MaLR -115 335 188 1154 296 50 39 chr2 11283578 11284020 -239403834 + LTR16A LTR ERVL 1 447 -3 819 242 119 40 chr2 11284020 11284135 -239403719 - MLT1J2 LTR MaLR -262 188 37 582 296 23 68 chr2 11285167 11285228 -239402626 + MIR SINE MIR 10 72 -190 2074 106 7 0 chr2 11285228 11285511 -239402343 + AluSg SINE Alu 1 285 -25 216 0 0 0 chr2 11285511 11285535 -239402319 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 582 296 23 68 chr2 11285535 11285736 -239402118 + MIR SINE MIR 70 261 -1 204 247 164 0 chr2 11286325 11286398 -239401456 + MIR SINE MIR 105 189 -73 21 0 0 0 chr2 11286937 11286958 -239400896 + AT_rich Low_complexity Low_complexity 1 21 0 200 265 66 78 chr2 11287054 11287220 -239400634 - L3 LINE CR1 -75 1502 1339 241 260 104 10 chr2 11288103 11288199 -239399655 + MIR SINE MIR 61 165 -97 458 279 75 7 chr2 11288710 11288857 -239398997 + MIR SINE MIR 30 186 -76 1136 252 43 41 chr2 11289026 11289371 -239398483 - L1ME3A LINE L1 -5 6165 5820 461 258 37 14 chr2 11289820 11289969 -239397885 + MIR SINE MIR 56 200 -36 8323 215 37 20 chr2 11290015 11291448 -239396406 + L1MA4A LINE L1 85 1492 -5356 2108 129 3 3 chr2 11291448 11291758 -239396096 + AluSg SINE Alu 1 310 0 8323 215 37 20 chr2 11291758 11294916 -239392938 + L1MA4A LINE L1 1492 5570 -1278 1591 124 6 95 chr2 11294919 11295276 -239392578 - MER4A LTR ERV1 0 664 261 627 134 0 10 chr2 11295276 11295373 -239392481 - MER4A LTR ERV1 -566 98 3 2749 130 26 70 chr2 11295374 11296280 -239391574 + L1MA4A LINE L1 5569 6434 -571 1856 120 38 17 chr2 11296280 11296567 -239391287 + L1MA4A LINE L1 6698 6994 -11 189 313 157 17 chr2 11296921 11297036 -239390818 - MIR3 SINE MIR -68 140 10 216 167 0 0 chr2 11297070 11297106 -239390748 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 415 277 202 16 chr2 11297119 11297372 -239390482 - L2 LINE L2 -12 3301 3002 269 320 59 30 chr2 11298037 11298178 -239389676 + MIR SINE MIR 16 161 -64 2313 105 0 0 chr2 11298301 11298595 -239389259 + AluSx SINE Alu 1 294 -18 204 40 0 0 chr2 11298636 11298661 -239389193 + (TGG)n Simple_repeat Simple_repeat 1 25 0 337 73 0 0 chr2 11299033 11299074 -239388780 + Alu SINE Alu 13 53 -247 896 104 149 0 chr2 11299075 11299209 -239388645 + AluSg/x SINE Alu 144 297 -13 2758 255 75 14 chr2 11299421 11299694 -239388160 + L1M4 LINE L1 3480 3735 -2411 2015 125 3 20 chr2 11299694 11299990 -239387864 + AluSx SINE Alu 1 291 -21 2758 255 75 14 chr2 11299990 11300623 -239387231 + L1M4 LINE L1 3735 4441 -1705 384 224 47 0 chr2 11300654 11300739 -239387115 - MER58C DNA MER1_type -1 214 126 183 80 0 0 chr2 11300740 11300765 -239387089 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 284 309 37 0 chr2 11300773 11300854 -239387000 - MER58C DNA MER1_type -131 84 1 2688 236 32 6 chr2 11300857 11301572 -239386282 + L1M4 LINE L1 4439 5172 -974 943 221 5 5 chr2 11302053 11302257 -239385597 + L1ME3A LINE L1 4666 4869 -1277 200 304 18 0 chr2 11302326 11302382 -239385472 + L2 LINE L2 3200 3256 -16 2552 48 3 0 chr2 11302391 11302685 -239385169 + AluY SINE Alu 1 295 -16 366 23 0 0 chr2 11302696 11302739 -239385115 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 226 310 216 0 chr2 11303240 11303356 -239384498 - MIR SINE MIR -73 189 49 313 301 54 62 chr2 11304251 11304397 -239383457 + MIR SINE MIR 47 198 -64 1330 137 124 29 chr2 11305150 11305487 -239382367 - MSTA LTR MaLR 0 375 1 369 286 40 16 chr2 11305527 11305653 -239382201 - MIR SINE MIR -114 148 20 2422 181 56 11 chr2 11305677 11306142 -239381712 - MER66B LTR ERV1 0 486 1 2077 138 16 0 chr2 11306608 11306913 -239380941 + AluSx SINE Alu 1 310 -2 184 258 52 122 chr2 11308553 11308766 -239379088 + L2 LINE L2 2831 3028 -244 548 219 34 41 chr2 11308902 11309096 -239378758 + MIR SINE MIR 14 205 -57 882 298 103 21 chr2 11309145 11309556 -239378298 + L1ME3A LINE L1 5119 5495 -675 1120 183 0 0 chr2 11309556 11309731 -239378123 - FAM SINE Alu 0 175 1 882 298 103 21 chr2 11309731 11310036 -239377818 + L1ME3A LINE L1 5495 5894 -276 236 283 38 4 chr2 11310524 11310626 -239377228 + MIR SINE MIR 82 188 -20 2006 128 0 27 chr2 11312160 11312457 -239375397 - AluSx SINE Alu -19 293 5 1292 194 86 119 chr2 11312633 11313061 -239374793 - MLT2D LTR ERVL 0 414 1 355 349 78 5 chr2 11313727 11313919 -239373935 + MIR SINE MIR 21 226 -36 184 325 32 51 chr2 11314744 11314901 -239372953 + L2 LINE L2 2154 2307 -1007 195 233 47 0 chr2 11315089 11315132 -239372722 + MIR SINE MIR 30 74 -134 197 317 33 17 chr2 11315219 11315287 -239372567 - MIR SINE MIR -22 240 168 3159 119 9 0 chr2 11315287 11315714 -239372140 + MER57B LTR ERV1 1 431 -3 197 317 33 17 chr2 11315714 11315765 -239372089 - MIR SINE MIR -94 168 119 185 256 64 39 chr2 11315777 11315855 -239371999 + MIR SINE MIR 158 237 -25 729 307 21 17 chr2 11317281 11317464 -239370390 + MIR SINE MIR 2 188 -74 3588 133 0 2 chr2 11317464 11317962 -239369892 + LOR1a LTR ERV1 1 497 0 729 307 21 17 chr2 11317962 11318016 -239369838 + MIR SINE MIR 188 240 -22 2109 106 32 16 chr2 11319737 11320048 -239367806 + THE1C LTR MaLR 1 316 -59 499 73 59 0 chr2 11323178 11323246 -239364608 + THE1C LTR MaLR 304 375 0 187 250 217 0 chr2 11323460 11323520 -239364334 - MIR3 SINE MIR -22 186 114 21 57 0 0 chr2 11323638 11323673 -239364181 + AT_rich Low_complexity Low_complexity 1 35 0 224 326 0 22 chr2 11323799 11323891 -239363963 - MIR SINE MIR -122 140 51 4111 184 28 73 chr2 11324245 11325190 -239362664 - L1MB7 LINE L1 -6 6178 5191 507 33 0 0 chr2 11325190 11325251 -239362603 + (CA)n Simple_repeat Simple_repeat 2 62 0 4111 184 28 73 chr2 11325251 11325594 -239362260 - L1MB7 LINE L1 -993 5191 4967 2004 117 46 0 chr2 11325594 11325877 -239361977 - AluY SINE Alu -15 296 1 4111 184 28 73 chr2 11325877 11326004 -239361850 - L1MB7 LINE L1 -1217 4967 4836 299 324 63 42 chr2 11326390 11326674 -239361180 + L1MC/D LINE L1 5353 5642 -2166 22 35 0 0 chr2 11326946 11326975 -239360879 + AT_rich Low_complexity Low_complexity 1 29 0 2575 71 0 0 chr2 11327252 11327560 -239360294 + AluY SINE Alu 1 308 -3 3980 169 18 35 chr2 11327794 11328573 -239359281 - L1MB3 LINE L1 -1 6182 5417 1717 255 22 13 chr2 11330124 11330587 -239357267 + MLT1C LTR MaLR 1 467 0 414 294 8 0 chr2 11333052 11333171 -239354683 - MIR SINE MIR -108 154 35 192 242 65 0 chr2 11334454 11334516 -239353338 + MIR SINE MIR 108 173 -89 226 188 0 21 chr2 11334817 11334865 -239352989 + (TA)n Simple_repeat Simple_repeat 1 47 0 199 269 19 67 chr2 11334877 11334937 -239352917 + MIR SINE MIR 164 218 -44 1834 192 14 11 chr2 11334937 11335301 -239352553 - MLT1A1 LTR MaLR 0 365 1 199 269 19 67 chr2 11335301 11335344 -239352510 + MIR SINE MIR 218 262 0 1172 44 0 7 chr2 11336205 11336342 -239351512 - AluY SINE Alu -175 136 1 2141 204 54 78 chr2 11336352 11336478 -239351376 - L1ME1 LINE L1 -5 6161 6034 885 117 0 0 chr2 11336478 11336606 -239351248 + L1PA10 LINE L1 6031 6158 -10 2141 204 54 78 chr2 11336606 11337110 -239350744 - L1ME1 LINE L1 -132 6034 5546 3442 176 47 43 chr2 11337119 11337864 -239349990 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11339269 11339290 -239348564 + (A)n Simple_repeat Simple_repeat 1 21 0 515 295 57 5 chr2 11339770 11339980 -239347874 - MIR SINE MIR -3 259 39 297 306 49 22 chr2 11340602 11340785 -239347069 + L2 LINE L2 2311 2498 -816 1017 249 9 0 chr2 11341053 11341282 -239346572 - MIR SINE MIR -10 252 22 319 185 126 89 chr2 11341361 11341496 -239346358 - MIR SINE MIR -83 179 40 271 336 25 16 chr2 11341602 11341724 -239346130 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11341871 11341898 -239345956 + (TC)n Simple_repeat Simple_repeat 1 28 0 1897 253 55 28 chr2 11343153 11343918 -239343936 - L1ME3 LINE L1 -42 6120 5292 265 250 14 0 chr2 11343916 11343988 -239343866 + L1M LINE L1 5323 5395 -769 * 739 311 86 17 chr2 11344639 11344990 -239342864 + MLT1I LTR MaLR 1 375 -34 292 274 163 26 chr2 11346150 11346303 -239341551 - Charlie8 DNA MER1_type -2201 216 43 650 284 135 48 chr2 11346638 11347125 -239340729 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11347125 11347161 -239340693 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 650 284 135 48 chr2 11347161 11347671 -239340183 + L2 LINE L2 2659 3297 -16 2320 145 31 3 chr2 11347671 11348063 -239339791 - MER57A LTR ERV1 0 403 1 650 284 135 48 chr2 11348063 11348081 -239339773 + L2 LINE L2 3297 3312 -1 1752 220 128 15 chr2 11348188 11348642 -239339212 + MLT1D LTR MaLR 1 505 0 2027 56 16 0 chr2 11348803 11349055 -239338799 + AluY SINE Alu 50 305 -6 188 325 0 38 chr2 11349257 11349337 -239338517 - MIR SINE MIR -138 124 48 246 284 55 31 chr2 11350176 11350303 -239337551 + L2 LINE L2 3141 3270 -2 21 71 0 0 chr2 11350495 11350537 -239337317 + AT_rich Low_complexity Low_complexity 1 42 0 345 290 80 23 chr2 11350572 11350748 -239337106 - MIR SINE MIR -57 205 20 219 283 0 0 chr2 11350756 11350816 -239337038 + CT-rich Low_complexity Low_complexity 2 61 0 392 254 90 25 chr2 11352036 11352158 -239335696 - LTR16C LTR ERVL -10 481 352 546 203 32 8 chr2 11352165 11352288 -239335566 + MER45B DNA AcHobo 3 128 -912 1479 201 60 6 chr2 11352291 11352605 -239335249 + MER45B DNA AcHobo 710 1040 0 583 266 35 18 chr2 11352608 11352777 -239335077 - LTR16C LTR ERVL -141 350 179 951 276 108 26 chr2 11353129 11353517 -239334337 - MLT1E2 LTR MaLR -2 624 205 2502 187 71 2 chr2 11353557 11354049 -239333805 - L1MB5 LINE L1 -8 6166 5641 526 219 270 0 chr2 11354054 11354191 -239333663 - MLT1E2 LTR MaLR -442 184 11 379 253 12 0 chr2 11354647 11354730 -239333124 + L2 LINE L2 3186 3269 -3 290 233 44 33 chr2 11356583 11356673 -239331181 + L2 LINE L2 2655 2745 -569 632 207 67 28 chr2 11356773 11356952 -239330902 + MER53 DNA DNA 2 187 -2 406 355 72 41 chr2 11356956 11357345 -239330509 + L2 LINE L2 2871 3271 -1 305 342 63 0 chr2 11358851 11359009 -239328845 - MIR SINE MIR -22 240 73 280 335 30 35 chr2 11359211 11359408 -239328446 + MIR SINE MIR 28 223 -39 1367 167 77 126 chr2 11361029 11361520 -239326334 + MLT1C LTR MaLR 1 467 0 247 306 71 0 chr2 11362236 11362321 -239325533 + L2 LINE L2 3172 3262 -10 451 257 66 0 chr2 11362784 11362936 -239324918 + MIR SINE MIR 87 248 -14 263 224 17 0 chr2 11362958 11363016 -239324838 - MIR SINE MIR -113 95 37 2718 88 14 11 chr2 11363163 11363526 -239324328 + THE1B LTR MaLR 1 364 0 326 301 73 1 chr2 11363526 11363660 -239324194 - MIR SINE MIR -62 146 31 288 221 0 67 chr2 11364003 11364107 -239323747 - L2 LINE L2 -61 3252 3156 2233 116 0 0 chr2 11364468 11364760 -239323094 - AluSc SINE Alu -16 293 2 356 298 43 14 chr2 11364998 11365140 -239322714 - MIR3 SINE MIR -65 143 15 479 282 160 0 chr2 11365612 11365793 -239322061 - MIR SINE MIR -6 256 47 2060 135 3 0 chr2 11366025 11366314 -239321540 - AluSx SINE Alu -21 291 2 2080 122 3 20 chr2 11367229 11367533 -239320321 - AluSx SINE Alu -13 299 1 1120 183 77 37 chr2 11368190 11368620 -239319234 - MLT1B LTR MaLR -16 451 1 522 263 0 0 chr2 11368620 11368730 -239319124 - MER69A DNA AcHobo -67 110 1 186 43 0 0 chr2 11368952 11368975 -239318879 + (CCA)n Simple_repeat Simple_repeat 1 23 0 196 292 14 0 chr2 11369183 11369255 -239318599 - MIR SINE MIR -70 138 66 193 308 92 17 chr2 11370338 11370458 -239317396 + MIR SINE MIR 127 255 -7 384 295 69 17 chr2 11370766 11370939 -239316915 + MIR SINE MIR 56 237 -25 209 182 0 0 chr2 11370956 11370989 -239316865 + (ATG)n Simple_repeat Simple_repeat 2 34 0 711 230 59 11 chr2 11371095 11371282 -239316572 + AluJo SINE Alu 116 311 -1 188 373 7 14 chr2 11371980 11372122 -239315732 - MIR SINE MIR -71 191 51 216 270 302 25 chr2 11372411 11372570 -239315284 + MIR SINE MIR 12 214 -48 281 306 0 0 chr2 11373276 11373348 -239314506 - L2 LINE L2 0 3272 3201 253 146 0 0 chr2 11373382 11373423 -239314431 - L2 LINE L2 -19 3294 3254 289 119 0 0 chr2 11373640 11373682 -239314172 - 5S rRNA rRNA -79 42 1 28 0 0 0 chr2 11374041 11374069 -239313785 + AT_rich Low_complexity Low_complexity 1 28 0 192 158 232 49 chr2 11374393 11374475 -239313379 + L2 LINE L2 3169 3265 -7 2297 97 0 7 chr2 11374831 11375129 -239312725 - AluY SINE Alu -13 298 3 209 372 41 28 chr2 11375136 11375281 -239312573 + L2 LINE L2 3119 3265 -7 1964 180 18 13 chr2 11375576 11375960 -239311894 + MLT2D LTR ERVL 1 482 -38 387 144 48 20 chr2 11375960 11376106 -239311748 + (TCTA)n Simple_repeat Simple_repeat 4 153 0 258 56 0 0 chr2 11376106 11376142 -239311712 + (TC)n Simple_repeat Simple_repeat 1 36 0 434 312 81 60 chr2 11376386 11376819 -239311035 + LTR16A1 LTR ERVL 16 457 0 186 273 23 0 chr2 11376828 11376872 -239310982 + L2 LINE L2 3216 3260 -12 2379 87 3 0 chr2 11376940 11377238 -239310616 - AluSc SINE Alu -10 299 1 2068 122 3 20 chr2 11377673 11377977 -239309877 + AluSx SINE Alu 1 299 -13 2039 135 3 0 chr2 11378892 11379181 -239308673 + AluSx SINE Alu 2 291 -21 532 291 137 4 chr2 11379377 11379594 -239308260 + MIR SINE MIR 15 256 -6 394 298 43 14 chr2 11380066 11380208 -239307646 + MIR3 SINE MIR 15 162 -65 2217 116 0 0 chr2 11380446 11380738 -239307116 + AluSc SINE Alu 2 293 -16 318 221 0 67 chr2 11381099 11381203 -239306651 + L2 LINE L2 3156 3252 -61 361 301 73 1 chr2 11381546 11381680 -239306174 + MIR SINE MIR 31 172 -62 2862 88 14 11 chr2 11381680 11382043 -239305811 - THE1B LTR MaLR 0 364 1 285 224 17 0 chr2 11382190 11382248 -239305606 + MIR SINE MIR 37 95 -113 513 286 134 0 chr2 11382270 11382487 -239305367 - MIR SINE MIR -14 248 3 183 268 0 36 chr2 11382495 11382551 -239305303 + MIR3 SINE MIR 105 158 -50 259 305 86 9 chr2 11382879 11382984 -239304870 - L2 LINE L2 -4 3268 3156 1500 159 77 126 chr2 11383687 11384178 -239303676 - MLT1C LTR MaLR 0 467 1 202 311 11 98 chr2 11384674 11384857 -239302997 - MIR SINE MIR -74 188 22 327 275 17 97 chr2 11385800 11386031 -239301823 - MIR SINE MIR -39 223 19 352 330 81 32 chr2 11386136 11386357 -239301497 + MIR SINE MIR 9 240 -22 520 349 121 35 chr2 11387863 11388256 -239299598 - L2 LINE L2 -1 3271 2913 654 196 73 34 chr2 11388256 11388435 -239299419 - MER53 DNA DNA -2 187 2 520 349 121 35 chr2 11388435 11388768 -239299086 - L2 LINE L2 -359 2913 2485 408 253 12 0 chr2 11390477 11390560 -239297294 - L2 LINE L2 -3 3269 3186 529 219 270 0 chr2 11391016 11391153 -239296701 + MLT1E2 LTR MaLR 11 184 -442 2518 187 71 2 chr2 11391158 11391650 -239296204 + L1MB5 LINE L1 5641 6166 -8 954 276 108 26 chr2 11391690 11392078 -239295776 + MLT1E2 LTR MaLR 205 624 -2 544 278 35 18 chr2 11392430 11392599 -239295255 + LTR16C LTR ERVL 179 350 -141 1503 201 60 6 chr2 11392602 11392916 -239294938 - MER45B DNA AcHobo 0 1040 710 544 203 32 8 chr2 11392919 11393042 -239294812 - MER45B DNA AcHobo -912 128 3 387 254 90 25 chr2 11393049 11393171 -239294683 + LTR16C LTR ERVL 352 481 -10 219 283 0 0 chr2 11394391 11394451 -239293403 + GA-rich Low_complexity Low_complexity 2 61 0 395 290 80 23 chr2 11394459 11394635 -239293219 + MIR SINE MIR 20 205 -57 21 71 0 0 chr2 11394670 11394712 -239293142 + AT_rich Low_complexity Low_complexity 1 42 0 288 284 55 31 chr2 11394904 11395031 -239292823 - L2 LINE L2 -2 3270 3141 210 325 0 38 chr2 11395869 11395949 -239291905 + MIR SINE MIR 48 124 -138 2672 36 0 3 chr2 11396151 11396458 -239291396 - AluY SINE Alu -5 306 1 2174 204 54 78 chr2 11396468 11396594 -239291260 - L1ME1 LINE L1 -5 6161 6034 930 117 0 0 chr2 11396594 11396722 -239291132 + L1PA10 LINE L1 6031 6158 -10 2174 204 54 78 chr2 11396722 11397226 -239290628 - L1ME1 LINE L1 -132 6034 5546 3464 176 47 43 chr2 11397235 11397980 -239289874 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11399385 11399406 -239288448 + (A)n Simple_repeat Simple_repeat 1 21 0 578 295 57 5 chr2 11399886 11400096 -239287758 - MIR SINE MIR -3 259 39 347 306 49 22 chr2 11400718 11400901 -239286953 + L2 LINE L2 2311 2498 -816 1090 249 9 0 chr2 11401169 11401398 -239286456 - MIR SINE MIR -10 252 22 360 185 126 89 chr2 11401477 11401612 -239286242 - MIR SINE MIR -83 179 40 307 336 25 16 chr2 11401718 11401840 -239286014 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11401987 11402014 -239285840 + (TC)n Simple_repeat Simple_repeat 1 28 0 1958 253 55 28 chr2 11403269 11404034 -239283820 - L1ME3 LINE L1 -42 6120 5292 269 250 14 0 chr2 11404032 11404104 -239283750 + L1M LINE L1 5323 5395 -769 * 744 311 86 17 chr2 11404755 11405106 -239282748 + MLT1I LTR MaLR 1 375 -34 299 274 163 26 chr2 11406266 11406419 -239281435 - Charlie8 DNA MER1_type -2190 227 54 850 284 135 48 chr2 11406754 11407241 -239280613 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11407241 11407277 -239280577 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 850 284 135 48 chr2 11407277 11407787 -239280067 + L2 LINE L2 2659 3297 -16 2446 145 31 3 chr2 11407787 11408179 -239279675 - MER57A LTR ERV1 0 403 1 850 284 135 48 chr2 11408179 11408197 -239279657 + L2 LINE L2 3297 3312 -1 1743 220 128 15 chr2 11408305 11408759 -239279095 + MLT1D LTR MaLR 1 505 0 2032 58 16 0 chr2 11408920 11409178 -239278676 + AluY SINE Alu 50 311 0 204 338 59 0 chr2 11409184 11409252 -239278602 + L2 LINE L2 3196 3267 -5 1622 152 27 0 chr2 11410052 11410315 -239277539 + AluJb SINE Alu 9 278 -34 276 30 0 0 chr2 11410320 11410353 -239277501 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2104 88 36 0 chr2 11410520 11410829 -239277025 + AluSx SINE Alu 1 319 0 4352 128 14 2 chr2 11411757 11412384 -239275470 + MER41B LTR ERV1 1 635 0 184 364 99 13 chr2 11412722 11412873 -239274981 - MIR SINE MIR -50 212 49 2327 108 0 0 chr2 11412943 11413249 -239274605 - AluSq SINE Alu -5 308 3 22 0 0 0 chr2 11413256 11413278 -239274576 + AT_rich Low_complexity Low_complexity 1 22 0 1969 154 0 0 chr2 11413921 11414214 -239273640 + AluSx SINE Alu 1 293 -19 323 259 98 76 chr2 11414420 11414656 -239273198 - L1ME4a LINE L1 -51 6070 5830 207 240 0 52 chr2 11414656 11414681 -239273173 + (TA)n Simple_repeat Simple_repeat 1 26 -65 1851 161 7 3 chr2 11414681 11414979 -239272875 - AluSx SINE Alu -13 299 1 207 240 0 52 chr2 11414979 11415004 -239272850 + (TA)n Simple_repeat Simple_repeat 26 51 -40 2301 170 2 38 chr2 11415004 11415422 -239272432 + MER57A LTR ERV1 1 403 0 207 240 0 52 chr2 11415422 11415466 -239272388 + (TA)n Simple_repeat Simple_repeat 51 91 0 226 275 122 8 chr2 11415470 11415601 -239272253 - L1ME4a LINE L1 -1989 5819 5674 2530 164 143 2 chr2 11415623 11416079 -239271775 - MLT2B1 LTR ERVL 0 520 1 281 202 191 12 chr2 11416079 11416163 -239271691 - L1ME4a LINE L1 -462 5659 5561 985 287 54 58 chr2 11417096 11417817 -239270037 - L2 LINE L2 -11 3302 2587 239 277 79 20 chr2 11417932 11418033 -239269821 - MIR SINE MIR -136 126 20 378 325 96 25 chr2 11418340 11418537 -239269317 - MIR SINE MIR -2 260 50 2389 70 0 3 chr2 11420300 11420600 -239267254 - AluY SINE Alu -12 299 1 295 192 0 0 chr2 11421177 11421229 -239266625 + MIR SINE MIR 130 181 -81 21 0 0 0 chr2 11422833 11422854 -239265000 + AT_rich Low_complexity Low_complexity 1 21 0 197 234 47 0 chr2 11423510 11423574 -239264280 + MIR SINE MIR 84 150 -112 2311 100 20 0 chr2 11423725 11424025 -239263829 + AluSc SINE Alu 1 306 -3 366 335 47 82 chr2 11424259 11424578 -239263276 - L2 LINE L2 0 3272 2965 210 259 0 37 chr2 11425287 11425341 -239262513 - L2 LINE L2 -12 3301 3250 * 333 295 29 0 chr2 11425330 11425435 -239262419 - MIR SINE MIR -99 163 56 332 306 12 23 chr2 11426625 11426798 -239261056 + (TATG)n Simple_repeat Simple_repeat 3 173 0 294 188 6 50 chr2 11426813 11426973 -239260881 + (TA)n Simple_repeat Simple_repeat 1 153 0 419 266 9 9 chr2 11426986 11427099 -239260755 + (TATG)n Simple_repeat Simple_repeat 2 114 0 336 200 0 0 chr2 11427143 11427213 -239260641 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 248 261 0 31 chr2 11428083 11428148 -239259706 + MIR SINE MIR 127 189 -73 197 83 28 0 chr2 11429130 11429166 -239258688 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 207 252 27 90 chr2 11429174 11429285 -239258569 - L2 LINE L2 -20 3252 3149 * 216 221 29 0 chr2 11429281 11429349 -239258505 + MIR SINE MIR 147 216 -46 1560 182 3 20 chr2 11429352 11429648 -239258206 - AluJo SINE Alu -7 305 15 195 186 0 0 chr2 11430499 11430542 -239257312 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 755 189 124 0 chr2 11430948 11431086 -239256768 - L1MA9 LINE L1 0 6312 6148 288 0 0 0 chr2 11431086 11431118 -239256736 + (TG)n Simple_repeat Simple_repeat 1 32 0 755 189 124 0 chr2 11431118 11431148 -239256706 - L1MA9 LINE L1 -164 6148 6123 258 293 160 9 chr2 11431148 11431254 -239256600 - MIR3 SINE MIR -42 166 45 840 274 112 6 chr2 11432476 11432816 -239255038 - L1MC4 LINE L1 -197 7845 7470 963 232 82 44 chr2 11432819 11433243 -239254611 - MER45C DNA AcHobo 0 953 441 269 238 40 40 chr2 11433289 11433390 -239254464 - MIR3 SINE MIR -12 196 96 2305 122 0 0 chr2 11433950 11434261 -239253593 + AluSp SINE Alu 1 311 -2 259 346 60 22 chr2 11434975 11435157 -239252697 + L2 LINE L2 3082 3270 -2 302 258 32 11 chr2 11435490 11435583 -239252271 + L2 LINE L2 2942 3036 -236 378 310 113 31 chr2 11435587 11435816 -239252038 - MIR SINE MIR 0 262 15 190 125 0 0 chr2 11435813 11435845 -239252009 + L2 LINE L2 371 402 -2912 * 2231 102 0 16 chr2 11436868 11437183 -239250671 + AluSq SINE Alu 1 310 -3 389 259 15 53 chr2 11437191 11437322 -239250532 + MIR SINE MIR 71 196 -66 261 315 67 11 chr2 11437370 11437459 -239250395 + MIR3 SINE MIR 10 103 -105 902 175 0 110 chr2 11437657 11437885 -239249969 - MLT1B LTR MaLR -187 203 1 195 114 0 0 chr2 11438843 11438878 -239248976 + (A)n Simple_repeat Simple_repeat 1 35 0 356 272 123 0 chr2 11440421 11440535 -239247319 + MIR SINE MIR 25 152 -110 620 275 69 15 chr2 11440810 11441149 -239246705 - L2 LINE L2 -250 3063 2709 282 303 61 15 chr2 11441463 11441595 -239246259 - L2 LINE L2 -38 3234 3097 368 308 68 0 chr2 11442106 11442223 -239245631 - L2 LINE L2 -3 3269 3145 306 344 46 33 chr2 11442242 11442393 -239245461 + L3 LINE CR1 1269 1421 -156 2642 53 0 0 chr2 11443631 11443935 -239243919 - AluY SINE Alu -7 304 1 206 292 0 0 chr2 11444114 11444162 -239243692 + MIR SINE MIR 51 98 -164 180 0 0 0 chr2 11444995 11445015 -239242839 + (A)n Simple_repeat Simple_repeat 1 20 0 296 280 147 42 chr2 11445121 11445264 -239242590 - MIR3 SINE MIR -21 187 30 1711 164 34 24 chr2 11445874 11446166 -239241688 - AluSx SINE Alu -17 295 1 412 249 22 88 chr2 11446330 11446511 -239241343 - MER5B DNA MER1_type -6 172 4 691 196 12 6 chr2 11446887 11447050 -239240804 + L1MA7 LINE L1 6117 6280 -11 198 271 0 0 chr2 11447218 11447266 -239240588 + L2 LINE L2 3266 3313 0 220 330 186 0 chr2 11447713 11447928 -239239926 + L2 LINE L2 2279 2533 -781 180 0 0 0 chr2 11447932 11447952 -239239902 + (T)n Simple_repeat Simple_repeat 1 20 0 287 378 10 31 chr2 11449088 11449281 -239238573 - MER5A DNA MER1_type 0 189 1 242 290 57 53 chr2 11450545 11450790 -239237064 - L2 LINE L2 -188 3084 2839 276 296 103 78 chr2 11450906 11451382 -239236472 + L2 LINE L2 2383 2870 -444 265 300 0 0 chr2 11451602 11451672 -239236182 + L2 LINE L2 3244 3313 0 331 151 0 0 chr2 11451688 11451741 -239236113 - MLT2A2 LTR ERVL 0 453 401 288 229 0 0 chr2 11451744 11451827 -239236027 + (TA)n Simple_repeat Simple_repeat 1 83 0 311 244 47 0 chr2 11451836 11451922 -239235932 - L1MC4 LINE L1 -1339 6703 6614 449 258 0 8 chr2 11451928 11452458 -239235396 + (TA)n Simple_repeat Simple_repeat 1 525 0 323 202 0 91 chr2 11452462 11452561 -239235293 - L1MC4 LINE L1 -1339 6703 6614 240 130 0 0 chr2 11452573 11452619 -239235235 + (TA)n Simple_repeat Simple_repeat 2 47 0 2601 82 69 11 chr2 11452623 11452999 -239234855 - MLT2A1 LTR ERVL -46 398 1 1001 172 18 0 chr2 11453593 11453762 -239234092 + AluSg/x SINE Alu 128 299 -13 533 281 18 6 chr2 11454899 11455066 -239232788 + MER5B DNA MER1_type 6 174 -4 395 290 10 0 chr2 11455120 11455220 -239232634 - MER5A DNA MER1_type -80 109 9 1383 132 168 16 chr2 11455636 11455886 -239231968 - LTR18B LTR ERVL 0 614 327 1603 187 25 16 chr2 11456289 11456610 -239231244 + MLT1A1 LTR MaLR 24 347 -18 252 0 0 0 chr2 11457748 11457776 -239230078 + (TG)n Simple_repeat Simple_repeat 2 29 0 181 250 62 16 chr2 11458472 11458536 -239229318 - MIR SINE MIR -69 139 73 213 108 0 0 chr2 11458675 11458712 -239229142 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 1914 291 197 31 chr2 11458876 11460240 -239227614 + L2 LINE L2 115 1738 -1576 267 31 0 0 chr2 11460240 11460272 -239227582 + (CA)n Simple_repeat Simple_repeat 2 33 0 1914 291 197 31 chr2 11460272 11460368 -239227486 + L2 LINE L2 1738 1817 -1497 416 221 83 66 chr2 11460598 11460779 -239227075 - MLT1J1 LTR MaLR -241 205 22 326 232 0 49 chr2 11460772 11460854 -239227000 + MLT1J2 LTR MaLR 373 450 0 * 182 188 0 21 chr2 11461362 11461410 -239226444 + GA-rich Low_complexity Low_complexity 3 49 0 2210 304 96 23 chr2 11461567 11462932 -239224922 + L2 LINE L2 1842 3312 -1 6791 69 7 20 chr2 11463309 11465068 -239222786 - L1PA7 LINE L1 0 6154 4404 24971 109 13 19 chr2 11465068 11468818 -239219036 - L1PA7 LINE L1 -2408 3738 11 321 68 0 0 chr2 11469118 11469162 -239218692 + (TG)n Simple_repeat Simple_repeat 2 45 0 382 241 141 11 chr2 11469861 11470052 -239217802 + MIR SINE MIR 47 262 0 255 31 0 0 chr2 11470622 11470654 -239217200 + (TG)n Simple_repeat Simple_repeat 1 32 0 1918 222 181 62 chr2 11475213 11475938 -239211916 - MER21B LTR ERV1 -52 811 1 2287 121 0 0 chr2 11476464 11476770 -239211084 - AluSx SINE Alu -6 306 1 2189 100 14 3 chr2 11478144 11478433 -239209421 - AluSg SINE Alu -18 292 1 441 0 0 0 chr2 11479441 11479490 -239208364 + (TG)n Simple_repeat Simple_repeat 2 50 0 306 275 25 17 chr2 11479498 11479618 -239208236 - MER5A DNA MER1_type -34 155 35 352 301 52 20 chr2 11479710 11479863 -239207991 + L2 LINE L2 2924 3081 -232 285 271 121 7 chr2 11481331 11481471 -239206383 + MIR SINE MIR 69 224 -38 2368 97 3 0 chr2 11481499 11481807 -239206047 + AluY SINE Alu 1 309 -2 753 328 104 7 chr2 11481952 11482367 -239205487 + HAL1 LINE L1 4 458 -2049 434 71 0 62 chr2 11482369 11482482 -239205372 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 251 137 0 20 chr2 11482476 11482527 -239205327 + (TCTA)n Simple_repeat Simple_repeat 2 51 0 * 1249 62 6 6 chr2 11482528 11482705 -239205149 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 964 129 20 0 chr2 11482707 11482854 -239205000 - AluJo SINE Alu -7 305 156 659 146 10 0 chr2 11482854 11482957 -239204897 - AluJo SINE Alu -207 105 2 5574 169 42 18 chr2 11483095 11483566 -239204288 - L1MC1 LINE L1 -7 6326 5868 1580 118 5 0 chr2 11483566 11483787 -239204067 - AluSg/x SINE Alu -7 305 84 5574 169 42 18 chr2 11483787 11484443 -239203411 - L1MC1 LINE L1 -465 5868 5172 2474 81 0 3 chr2 11486495 11486802 -239201052 - AluSc SINE Alu -1 308 3 4737 237 83 57 chr2 11486826 11489806 -239198048 - L1MB8 LINE L1 -1 6988 3931 350 287 46 9 chr2 11490203 11490407 -239197447 - L1MB8 LINE L1 -6298 557 92 261 0 0 0 chr2 11491130 11491159 -239196695 + (TG)n Simple_repeat Simple_repeat 2 30 0 197 128 21 0 chr2 11491483 11491530 -239196324 + (CA)n Simple_repeat Simple_repeat 1 48 0 399 148 52 7 chr2 11491552 11491707 -239196147 + (CA)n Simple_repeat Simple_repeat 2 163 0 364 139 57 8 chr2 11491727 11491849 -239196005 + (CA)n Simple_repeat Simple_repeat 2 129 0 183 214 24 0 chr2 11492544 11492586 -239195268 - L2 LINE L2 -4 3309 3267 256 341 12 0 chr2 11493904 11493986 -239193868 - L2 LINE L2 -8 3264 3182 237 297 99 39 chr2 11494210 11494392 -239193462 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 11494603 11494624 -239193230 + AT_rich Low_complexity Low_complexity 1 21 0 1407 167 13 99 chr2 11495046 11495310 -239192544 + AluJb SINE Alu 3 238 -74 3461 64 21 0 chr2 11495310 11495745 -239192109 - MLT2A1 LTR ERVL 0 444 1 1407 167 13 99 chr2 11495745 11495792 -239192062 + AluJb SINE Alu 238 287 -25 22 0 0 0 chr2 11496085 11496107 -239191747 + AT_rich Low_complexity Low_complexity 1 22 0 303 326 77 11 chr2 11496109 11496290 -239191564 + MIR SINE MIR 20 212 -50 285 336 38 0 chr2 11498012 11498143 -239189711 + MIR SINE MIR 121 256 -6 468 178 68 42 chr2 11499746 11499864 -239187990 + MER69 DNA AcHobo 6 126 -2400 924 186 67 74 chr2 11500130 11500303 -239187551 - MER21B LTR ERV1 -128 735 563 1755 114 41 131 chr2 11500303 11500715 -239187139 - THE1C LTR MaLR 0 375 1 924 186 67 74 chr2 11500715 11500810 -239187044 - MER21B LTR ERV1 -300 563 469 1403 194 20 14 chr2 11501662 11501955 -239185899 - L1MD1 LINE L1 0 6242 5948 355 148 0 0 chr2 11501964 11502025 -239185829 - L1MD1 LINE L1 -538 5704 5644 296 244 11 0 chr2 11502473 11502563 -239185291 + CT-rich Low_complexity Low_complexity 2 92 0 601 122 35 29 chr2 11502594 11502766 -239185088 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 312 19 37 37 chr2 11502819 11502873 -239184981 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 213 241 0 0 chr2 11503317 11503371 -239184483 + CT-rich Low_complexity Low_complexity 2 55 0 265 147 15 29 chr2 11503402 11503470 -239184384 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 669 70 21 65 chr2 11503485 11503671 -239184183 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 601 276 18 18 chr2 11504226 11504443 -239183411 - L1ME3 LINE L1 -2 6160 5944 263 363 14 7 chr2 11504709 11504855 -239182999 - MIR3 SINE MIR -3 205 59 2346 168 8 3 chr2 11504955 11505343 -239182511 + MLT1B LTR MaLR 1 390 0 610 244 21 73 chr2 11505396 11505630 -239182224 - MIR SINE MIR -11 251 30 396 328 0 8 chr2 11508348 11508479 -239179375 + MIR SINE MIR 20 149 -113 662 293 52 4 chr2 11508724 11508953 -239178901 - MIR SINE MIR -22 240 1 204 40 0 0 chr2 11509327 11509352 -239178502 + (A)n Simple_repeat Simple_repeat 1 25 0 202 200 0 0 chr2 11509631 11509671 -239178183 + (TG)n Simple_repeat Simple_repeat 1 40 0 1319 232 21 26 chr2 11509920 11510260 -239177594 + MER46C DNA MER2_type 1 338 0 307 295 62 8 chr2 11510264 11510393 -239177461 - MIR SINE MIR -70 192 57 298 242 63 32 chr2 11510553 11510648 -239177206 + MER5A DNA MER1_type 9 106 -83 944 182 13 89 chr2 11511121 11511357 -239176497 - MER20 DNA MER1_type -1 218 1 423 223 140 70 chr2 11512786 11513086 -239174768 + MER5C DNA MER1_type 1 321 -3 1545 173 24 0 chr2 11513724 11513978 -239173876 + AluJo SINE Alu 36 295 -17 534 216 46 33 chr2 11514058 11514211 -239173643 + MIR SINE MIR 68 222 -40 865 261 29 86 chr2 11514503 11514981 -239172873 - L2 LINE L2 -2 3311 2861 1374 170 25 4 chr2 11515536 11515813 -239172041 + L1MA8 LINE L1 6006 6288 -3 387 277 34 0 chr2 11516170 11516289 -239171565 - MIR SINE MIR -56 152 30 215 327 40 30 chr2 11516461 11516562 -239171292 - L2 LINE L2 -32 3240 3139 440 291 43 52 chr2 11517363 11517597 -239170257 - MLT1J1 LTR MaLR -13 498 202 650 268 81 55 chr2 11517830 11518215 -239169639 + MLT1J LTR MaLR 114 508 -3 881 219 15 5 chr2 11518328 11518524 -239169330 - MER58A DNA MER1_type 0 224 27 1441 200 0 32 chr2 11518847 11519132 -239168722 + AluJb SINE Alu 1 276 -36 2164 104 14 3 chr2 11520825 11521114 -239166740 - AluSg SINE Alu -18 292 1 279 0 0 0 chr2 11522088 11522119 -239165735 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 293 46 9 chr2 11522845 11523049 -239164805 + L1M4 LINE L1 92 557 -6298 418 333 35 7 chr2 11525196 11525337 -239162517 + MIR SINE MIR 20 164 -98 727 293 52 4 chr2 11525572 11525801 -239162053 - MIR SINE MIR -22 240 1 344 287 106 60 chr2 11527158 11527572 -239160282 - L1M4 LINE L1 -2374 3772 3340 399 291 0 18 chr2 11527738 11527848 -239160006 + L2 LINE L2 3201 3308 -5 2319 102 0 0 chr2 11529575 11529880 -239157974 - AluY SINE Alu -6 305 1 325 271 121 7 chr2 11529908 11530048 -239157806 - MIR SINE MIR -38 224 69 180 227 76 61 chr2 11530452 11530518 -239157336 - L2 LINE L2 -67 3246 3180 865 306 81 13 chr2 11532082 11532552 -239155302 + L1ME3A LINE L1 5334 5835 -335 318 157 0 0 chr2 11533164 11533214 -239154640 - MLT1A1 LTR MaLR 0 365 316 1775 183 30 11 chr2 11533214 11533575 -239154279 - MER73 LTR ERVL 0 644 277 1554 154 10 29 chr2 11533604 11533910 -239153944 - MER73 LTR ERVL -344 300 1 1112 209 67 47 chr2 11533910 11534207 -239153647 - MLT1A1 LTR MaLR -45 320 18 257 354 12 0 chr2 11535181 11535263 -239152591 - L2 LINE L2 -8 3264 3182 295 291 99 39 chr2 11535488 11535670 -239152184 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 11535881 11535902 -239151952 + AT_rich Low_complexity Low_complexity 1 21 0 1942 128 0 73 chr2 11536328 11536656 -239151198 + AluSx SINE Alu 7 310 -2 1469 226 7 7 chr2 11537722 11538023 -239149831 - AluJb SINE Alu -1 301 1 3290 167 29 10 chr2 11538047 11538563 -239149291 + MER1A DNA MER1_type 1 526 -1 279 79 0 0 chr2 11538626 11538664 -239149190 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2027 112 3 18 chr2 11538666 11538951 -239148903 - AluSx SINE Alu -31 281 1 285 51 0 0 chr2 11538968 11539007 -239148847 + (TA)n Simple_repeat Simple_repeat 1 39 0 1222 67 6 6 chr2 11540760 11540939 -239146915 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 929 136 20 0 chr2 11540941 11541088 -239146766 - AluJo SINE Alu -7 305 156 702 146 10 0 chr2 11541088 11541191 -239146663 - AluJo SINE Alu -207 105 2 2344 168 86 17 chr2 11541329 11541804 -239146050 - L1MC1 LINE L1 -7 6326 5819 1363 152 5 0 chr2 11541804 11542021 -239145833 - AluSg/x SINE Alu -11 299 82 3072 197 12 3 chr2 11542021 11542676 -239145178 - L1MC1 LINE L1 -501 5832 5172 8105 139 104 35 chr2 11544594 11546064 -239141790 - THE1C-int LTR MaLR -9 1571 1 2325 154 11 16 chr2 11546064 11546441 -239141413 - THE1C LTR MaLR 0 375 1 702 260 116 0 chr2 11546551 11546886 -239140968 - L1MEc LINE L1 -5285 1111 738 505 303 31 65 chr2 11546978 11547361 -239140493 - L1MEc LINE L1 -5918 478 109 400 263 9 26 chr2 11547356 11547470 -239140384 + L1ME1 LINE L1 6060 6330 -4 * 237 257 162 54 chr2 11547527 11547749 -239140105 + L1M4 LINE L1 4740 4985 -1161 490 118 0 0 chr2 11547780 11547848 -239140006 - AluS SINE Alu -240 69 2 1913 219 180 63 chr2 11552646 11553372 -239134482 - MER21B LTR ERV1 -52 811 1 2243 124 0 0 chr2 11553898 11554204 -239133650 - AluSx SINE Alu -6 306 1 196 279 62 47 chr2 11555263 11555392 -239132462 + MER5C DNA MER1_type 21 151 -173 450 291 43 52 chr2 11555408 11555642 -239132212 - MLT1J1 LTR MaLR -13 498 202 674 270 75 49 chr2 11555875 11556260 -239131594 + MLT1J LTR MaLR 114 508 -3 1132 187 5 5 chr2 11556373 11556571 -239131283 - MER58A DNA MER1_type 0 224 27 1784 139 0 28 chr2 11556894 11557181 -239130673 + AluJb SINE Alu 1 279 -33 181 370 30 10 chr2 11557402 11557502 -239130352 + MIR SINE MIR 93 194 -68 399 291 0 18 chr2 11560007 11560117 -239127737 - L2 LINE L2 -5 3308 3201 296 287 109 63 chr2 11560283 11560697 -239127157 + L1M4 LINE L1 3340 3772 -2374 2612 151 17 2 chr2 11561505 11561923 -239125931 - L1MB1 LINE L1 0 6168 5745 563 105 35 0 chr2 11561923 11562009 -239125845 + L1M3 LINE L1 5402 5490 -844 1305 170 74 22 chr2 11562011 11562345 -239125509 + MSTD LTR MaLR 1 396 0 1337 155 8 45 chr2 11562345 11562590 -239125264 + L1M3 LINE L1 5498 5733 -601 246 327 63 20 chr2 11562690 11562789 -239125065 + MIR SINE MIR 61 164 -44 203 270 27 40 chr2 11563989 11564063 -239123791 + MIR SINE MIR 117 189 -73 2481 137 8 14 chr2 11564949 11565315 -239122539 - THE1B LTR MaLR 0 364 1 1797 264 106 11 chr2 11565435 11565962 -239121892 - MLT1E LTR MaLR -7 586 10 202 356 74 18 chr2 11566087 11566250 -239121604 + L2 LINE L2 2590 2761 -553 24 0 0 0 chr2 11566807 11566831 -239121023 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr2 11567836 11567861 -239119993 + (A)n Simple_repeat Simple_repeat 1 25 0 229 175 0 48 chr2 11568336 11568379 -239119475 + (TTCA)n Simple_repeat Simple_repeat 1 42 -18 907 217 56 0 chr2 11568379 11568577 -239119277 + MER3 DNA MER1_type 1 209 0 229 175 0 48 chr2 11568577 11568596 -239119258 + (TTCA)n Simple_repeat Simple_repeat 42 60 0 25 0 0 0 chr2 11568809 11568834 -239119020 + AT_rich Low_complexity Low_complexity 1 25 0 318 26 0 0 chr2 11570320 11570359 -239117495 + (TG)n Simple_repeat Simple_repeat 2 40 0 238 320 39 0 chr2 11570574 11570677 -239117177 + L3b LINE CR1 1241 1347 -236 268 276 33 98 chr2 11570745 11571020 -239116834 - L2 LINE L2 -187 3085 2829 2592 110 123 5 chr2 11573168 11573551 -239114303 + MSTA LTR MaLR 1 428 0 2466 88 0 0 chr2 11573861 11574169 -239113685 - AluSc SINE Alu -1 308 1 2294 139 55 31 chr2 11574688 11575106 -239112748 + MSTA LTR MaLR 1 428 0 188 316 98 60 chr2 11575118 11575251 -239112603 + L2 LINE L2 3127 3264 -8 254 207 0 0 chr2 11575368 11575426 -239112428 + L1MC4 LINE L1 6647 6704 -1338 333 215 15 0 chr2 11575620 11575685 -239112169 + L2 LINE L2 3193 3258 -55 391 202 55 55 chr2 11576261 11576444 -239111410 + L1MC5 LINE L1 7624 7806 -155 234 322 28 18 chr2 11576615 11576748 -239111106 - MIR3 SINE MIR -42 166 45 753 135 21 64 chr2 11576997 11577136 -239110718 + LTR39 LTR ERV1 2 134 -649 3562 139 214 13 chr2 11577136 11577906 -239109948 + MER21A LTR ERV1 1 925 -6 622 93 10 0 chr2 11577915 11578012 -239109842 + LTR39 LTR ERV1 133 230 -553 3701 153 21 40 chr2 11578015 11578740 -239109114 + MER50 LTR ERV1 1 711 -23 2746 184 12 38 chr2 11578778 11578985 -239108869 + LTR39 LTR ERV1 223 434 -349 2242 114 3 0 chr2 11578985 11579284 -239108570 - AluSx SINE Alu -12 300 1 2746 184 12 38 chr2 11579284 11579652 -239108202 + LTR39 LTR ERV1 434 783 0 2324 226 41 18 chr2 11581102 11581709 -239106145 + MLT1E2 LTR MaLR 1 621 -5 991 113 0 0 chr2 11581794 11581935 -239105919 + AluSc SINE Alu 168 308 -1 311 354 39 50 chr2 11582673 11582854 -239105000 - L1MEc LINE L1 -6024 372 194 1877 166 3 3 chr2 11582859 11583160 -239104694 - AluJb SINE Alu -3 309 9 3171 140 34 6 chr2 11583190 11583697 -239104157 + MER1A DNA MER1_type 1 521 -8 315 71 0 0 chr2 11583769 11583811 -239104043 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2022 112 3 18 chr2 11583813 11584098 -239103756 - AluSx SINE Alu -31 281 1 363 23 0 0 chr2 11584114 11584158 -239103696 + (TA)n Simple_repeat Simple_repeat 1 44 0 1894 144 0 72 chr2 11586488 11586821 -239101033 - AluSx SINE Alu -2 310 2 1385 188 44 44 chr2 11586860 11587180 -239100674 + MLT1A1 LTR MaLR 1 320 -45 1440 149 10 36 chr2 11587180 11587488 -239100366 + MER73 LTR ERVL 1 300 -344 1653 177 28 11 chr2 11587517 11587879 -239099975 + MER73 LTR ERVL 277 644 0 292 157 0 0 chr2 11587879 11587929 -239099925 + MLT1A1 LTR MaLR 316 365 0 942 297 56 18 chr2 11588566 11589434 -239098420 - L1ME LINE L1 -354 5808 4906 355 263 9 26 chr2 11589629 11589743 -239098111 - L1ME1 LINE L1 -4 6330 6060 * 425 311 34 48 chr2 11589738 11590031 -239097823 + L1MEc LINE L1 109 397 -5999 572 260 116 0 chr2 11590213 11590548 -239097306 + L1MEc LINE L1 738 1111 -5285 2169 151 11 16 chr2 11590658 11591035 -239096819 + THE1C LTR MaLR 1 375 0 7565 138 105 35 chr2 11591035 11592507 -239095347 + THE1C-int LTR MaLR 1 1574 -6 2023 168 16 16 chr2 11592513 11592888 -239094966 + THE1C LTR MaLR 1 375 0 2254 131 8 37 chr2 11593226 11593601 -239094253 - THE1B LTR MaLR 0 364 1 182 288 34 85 chr2 11593958 11594011 -239093843 + MIR SINE MIR 21 75 -187 2023 154 10 46 chr2 11594011 11594400 -239093454 + THE1C LTR MaLR 1 375 0 182 288 34 85 chr2 11594400 11594464 -239093390 + MIR SINE MIR 75 132 -130 2011 164 0 0 chr2 11595268 11595566 -239092288 - AluSx SINE Alu -14 298 1 23 78 0 0 chr2 11595914 11595965 -239091889 + AT_rich Low_complexity Low_complexity 1 51 0 306 209 23 23 chr2 11596187 11596273 -239091581 - MLT1J2 LTR MaLR -2 448 363 1317 203 137 34 chr2 11597260 11597704 -239090150 - L1MC5 LINE L1 -499 7462 6973 348 24 0 0 chr2 11598079 11598120 -239089734 + (GA)n Simple_repeat Simple_repeat 2 42 0 526 312 17 0 chr2 11598137 11598310 -239089544 - MLT1J2 LTR MaLR -274 176 1 281 182 82 39 chr2 11599605 11599718 -239088136 - MLT1J2 LTR MaLR -2 444 336 792 190 40 6 chr2 11599919 11600093 -239087761 + MER3 DNA MER1_type 1 180 -29 1574 70 8 66 chr2 11600388 11600632 -239087222 + MER30 DNA MER1_type 1 230 0 2213 126 0 13 chr2 11601690 11601999 -239085855 - AluSx SINE Alu -7 305 1 184 265 78 59 chr2 11602712 11602814 -239085040 + MIR SINE MIR 33 136 -72 226 345 103 0 chr2 11603671 11603787 -239084067 + L1MC/D LINE L1 5518 5645 -2163 411 56 0 0 chr2 11603934 11603988 -239083866 + (TG)n Simple_repeat Simple_repeat 2 55 0 349 305 85 61 chr2 11603991 11604237 -239083617 + L3 LINE CR1 923 1174 -403 1599 190 13 13 chr2 11604798 11605103 -239082751 + AluJo SINE Alu 1 305 -7 1215 246 40 70 chr2 11605119 11605549 -239082305 + MLT1J LTR MaLR 95 511 0 258 247 35 0 chr2 11605994 11606079 -239081775 - HAL1 LINE L1 -343 2164 2077 568 371 96 19 chr2 11606379 11606743 -239081111 - HAL1 LINE L1 -581 1926 1535 645 306 27 27 chr2 11607463 11607724 -239080130 + MIR SINE MIR 2 262 0 1312 243 41 17 chr2 11608162 11608578 -239079276 + MER31A LTR ERV1 56 481 -4 30 27 0 0 chr2 11609089 11609126 -239078728 + AT_rich Low_complexity Low_complexity 1 37 0 341 226 108 0 chr2 11610049 11610151 -239077703 + L2 LINE L2 1906 2018 -1296 202 330 115 35 chr2 11610175 11610436 -239077418 + L2 LINE L2 2157 2438 -876 225 206 0 0 chr2 11610823 11610886 -239076968 - L1MB8 LINE L1 -237 5941 5879 2435 171 5 18 chr2 11610954 11611394 -239076460 - Tigger2a DNA MER2_type 0 434 1 320 344 73 9 chr2 11611426 11611743 -239076111 - L1MB8 LINE L1 -335 5835 5499 2873 241 70 35 chr2 11611747 11613227 -239074627 - L1MEc LINE L1 -3125 3004 1513 833 110 123 7 chr2 11613232 11613387 -239074467 - LTR47A LTR ERVL -6 446 274 272 191 0 32 chr2 11613648 11613711 -239074143 - L1MEc LINE L1 -4764 1367 1307 587 281 63 24 chr2 11613790 11614043 -239073811 - LTR16C LTR ERVL -36 455 193 792 236 73 20 chr2 11614489 11614887 -239072967 - L1MEc LINE L1 -2962 3167 2749 258 305 36 6 chr2 11614870 11615037 -239072817 - HAL1 LINE L1 -1221 1286 1115 * 270 279 60 60 chr2 11615462 11615645 -239072209 - L1MEc LINE L1 -5638 481 299 279 0 0 0 chr2 11615784 11615815 -239072039 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 360 277 26 52 chr2 11615851 11616006 -239071848 - L1MEc LINE L1 -5966 153 3 342 294 159 23 chr2 11616212 11616426 -239071428 - MIR SINE MIR -11 251 9 1409 136 11 11 chr2 11616895 11617159 -239070695 + L1MA9 LINE L1 6043 6306 -6 195 100 0 0 chr2 11617160 11617190 -239070664 + (TA)n Simple_repeat Simple_repeat 2 31 0 1501 209 47 70 chr2 11618250 11618301 -239069553 + MLT1A1 LTR MaLR 1 52 -313 2329 100 3 3 chr2 11618301 11618612 -239069242 + AluSp SINE Alu 1 311 -2 1501 209 47 70 chr2 11618612 11618943 -239068911 + MLT1A1 LTR MaLR 52 365 0 2327 118 0 0 chr2 11619441 11619747 -239068107 - AluSq SINE Alu -7 306 1 2104 105 0 52 chr2 11619751 11620057 -239067797 - AluSc SINE Alu -19 290 1 275 188 0 0 chr2 11620106 11620170 -239067684 + MER53 DNA DNA 98 161 -28 * 295 242 11 0 chr2 11620113 11620204 -239067650 - MER53 DNA DNA -94 95 4 362 303 28 9 chr2 11620271 11620380 -239067474 + MIR SINE MIR 40 150 -112 498 299 140 43 chr2 11620429 11620449 -239067405 + MLT1J2 LTR MaLR 44 61 -389 2091 145 22 27 chr2 11620449 11620815 -239067039 + THE1B LTR MaLR 1 364 0 498 299 140 43 chr2 11620815 11621056 -239066798 + MLT1J2 LTR MaLR 61 354 -96 207 0 0 0 chr2 11621056 11621079 -239066775 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 498 299 140 43 chr2 11621079 11621187 -239066667 + MLT1J2 LTR MaLR 354 450 0 818 204 0 12 chr2 11621983 11622155 -239065699 - MLT1B LTR MaLR 0 467 298 21 0 0 0 chr2 11622231 11622252 -239065602 + AT_rich Low_complexity Low_complexity 1 21 0 677 188 18 100 chr2 11622252 11622422 -239065432 - FRAM SINE Alu -21 155 1 904 146 58 6 chr2 11622423 11622594 -239065260 - MLT1B LTR MaLR -210 180 1 417 180 0 0 chr2 11623088 11623177 -239064677 + (TA)n Simple_repeat Simple_repeat 1 89 0 52 17 0 0 chr2 11623177 11623236 -239064618 + AT_rich Low_complexity Low_complexity 1 59 0 721 197 0 0 chr2 11623237 11623359 -239064495 - FLAM_C SINE Alu -11 122 1 281 247 12 0 chr2 11623811 11623892 -239063962 + MLT1J1 LTR MaLR 364 445 -1 452 256 65 33 chr2 11624132 11624328 -239063526 - MIR3 SINE MIR 0 208 1 536 282 13 6 chr2 11624409 11624565 -239063289 + MIR SINE MIR 54 210 -52 233 393 12 24 chr2 11625101 11625269 -239062585 - MIR SINE MIR -50 212 47 355 184 70 0 chr2 11626025 11626139 -239061715 - MER69 DNA AcHobo -91 2435 2314 640 287 84 24 chr2 11626184 11626435 -239061419 + L2 LINE L2 3045 3310 -3 309 321 60 36 chr2 11626690 11626858 -239060996 + L2 LINE L2 2118 2289 -1025 261 263 53 11 chr2 11627838 11627933 -239059921 + HAL1b LINE L1 669 767 -581 758 265 78 81 chr2 11628218 11628322 -239059532 + L1MC4a LINE L1 5266 5369 -2439 1849 165 13 3 chr2 11628322 11628625 -239059229 + AluJb SINE Alu 1 306 -6 758 265 78 81 chr2 11628625 11629185 -239058669 + L1MC4a LINE L1 5369 5928 -1880 200 304 104 44 chr2 11629256 11629391 -239058463 - MIR3 SINE MIR -65 143 1 199 378 76 43 chr2 11629391 11629678 -239058176 - L2 LINE L2 -47 3225 2929 249 83 0 0 chr2 11629678 11629714 -239058140 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 826 341 106 20 chr2 11629714 11630316 -239057538 - L2 LINE L2 -6 3307 2600 1940 92 30 4 chr2 11630316 11630578 -239057276 + AluSq SINE Alu 36 304 -9 826 341 106 20 chr2 11630578 11630825 -239057029 - L2 LINE L2 -713 2600 2376 25 0 0 0 chr2 11631008 11631033 -239056821 + AT_rich Low_complexity Low_complexity 1 25 0 442 256 41 58 chr2 11631040 11631212 -239056642 - MIR SINE MIR -73 189 21 185 180 20 0 chr2 11631236 11631286 -239056568 + CT-rich Low_complexity Low_complexity 1 51 0 1077 210 53 3 chr2 11631311 11631639 -239056215 - MER33 DNA MER1_type -19 305 1 2059 165 71 15 chr2 11631730 11632137 -239055717 - MSTB1 LTR MaLR 0 432 3 560 239 11 64 chr2 11633206 11633394 -239054460 + MER5B DNA MER1_type 1 178 0 542 209 15 0 chr2 11633502 11633636 -239054218 - Charlie1 DNA MER1_type 0 2761 2626 3550 166 27 11 chr2 11633677 11634334 -239053520 - MSTA-int LTR MaLR -983 668 1 2601 167 7 0 chr2 11634334 11634759 -239053095 - MSTA LTR MaLR 0 428 1 26 0 0 0 chr2 11635830 11635856 -239051998 + AT_rich Low_complexity Low_complexity 1 26 0 1827 151 0 14 chr2 11635856 11636147 -239051707 - AluSx SINE Alu -25 287 1 289 247 93 41 chr2 11636154 11636251 -239051603 + MIR SINE MIR 74 175 -87 200 274 48 0 chr2 11636632 11636694 -239051160 - MIR SINE MIR -117 145 81 1156 80 0 12 chr2 11636847 11637010 -239050844 - L1PA7 LINE L1 0 6154 5994 24 0 0 0 chr2 11637303 11637327 -239050527 + AT_rich Low_complexity Low_complexity 1 24 0 1729 168 30 0 chr2 11637606 11637945 -239049909 - MLT1B LTR MaLR 0 390 42 339 263 34 69 chr2 11638087 11638262 -239049592 + L1ME LINE L1 1030 1198 -5174 293 273 81 41 chr2 11638266 11638758 -239049096 + L1ME LINE L1 1101 1589 -4793 278 270 74 20 chr2 11638887 11639035 -239048819 - L1MC4a LINE L1 -1799 6009 5854 804 287 61 48 chr2 11639575 11640479 -239047375 - L1MEc LINE L1 -4602 2223 1148 458 405 25 25 chr2 11640928 11641325 -239046529 - L1MEc LINE L1 -5857 968 572 331 292 77 32 chr2 11641410 11641787 -239046067 + L1ME LINE L1 2346 2739 -3643 * 1228 260 53 80 chr2 11641786 11642410 -239045444 - L1MEc LINE L1 -5931 611 5 676 267 39 41 chr2 11642953 11643541 -239044313 - L1MEc LINE L1 -2974 3376 2708 300 221 123 26 chr2 11643780 11643934 -239043920 - L1MEc LINE L1 -4093 2438 2270 538 315 110 67 chr2 11644156 11644591 -239043263 - L1MEc LINE L1 -4581 1950 1497 238 258 31 10 chr2 11644596 11644693 -239043161 - L1ME LINE L1 -4553 1728 1630 420 288 57 36 chr2 11644696 11644934 -239042920 - L1ME LINE L1 -5009 1345 1115 2534 59 0 0 chr2 11644934 11645238 -239042616 + AluY SINE Alu 3 306 -5 420 288 57 36 chr2 11645238 11645277 -239042577 - L1ME LINE L1 -5239 1115 1078 1433 183 14 57 chr2 11645984 11646333 -239041521 + MLT1A1 LTR MaLR 1 334 -31 311 266 88 24 chr2 11647819 11647974 -239039880 - MIR SINE MIR -63 145 27 280 259 137 61 chr2 11648547 11648744 -239039110 - MIR SINE MIR -11 251 40 2354 101 0 0 chr2 11648745 11649051 -239038803 - AluSx SINE Alu -6 306 1 1952 138 51 28 chr2 11649075 11649431 -239038423 + THE1B LTR MaLR 1 364 0 206 328 0 0 chr2 11650491 11650549 -239037305 + L2 LINE L2 3215 3272 0 277 322 37 39 chr2 11650933 11651238 -239036616 - L2 LINE L2 -238 3034 2670 307 378 35 21 chr2 11652129 11652272 -239035582 - L2 LINE L2 -1 3271 3127 932 240 137 35 chr2 11652283 11652875 -239034979 - Charlie7 DNA MER1_type 0 2612 1961 4105 208 52 18 chr2 11652890 11653036 -239034818 + L1MB5 LINE L1 4108 4248 -1926 195 42 0 0 chr2 11653036 11653060 -239034794 + (CA)n Simple_repeat Simple_repeat 1 24 0 4105 208 52 18 chr2 11653060 11654906 -239032948 + L1MB5 LINE L1 4248 6167 -7 3953 198 56 6 chr2 11654906 11655885 -239031969 + MER45R DNA AcHobo 551 1578 -3 2656 187 19 67 chr2 11656288 11656931 -239030923 - LTR9 LTR ERV1 0 612 1 294 315 109 36 chr2 11657767 11657932 -239029922 + MIR SINE MIR 86 262 0 252 308 49 53 chr2 11658639 11658816 -239029038 + MIR SINE MIR 16 190 -57 1934 116 87 0 chr2 11659943 11660218 -239027636 - AluSx SINE Alu -13 299 1 623 327 137 27 chr2 11660218 11660692 -239027162 - L1MDa LINE L1 -4449 2091 1566 290 348 78 16 chr2 11661339 11661595 -239026259 - L2 LINE L2 -812 2502 2231 1192 183 5 5 chr2 11661774 11662021 -239025833 + AluJb SINE Alu 81 327 0 305 333 8 15 chr2 11662067 11662199 -239025655 + MIR3 SINE MIR 71 201 -7 4869 61 8 2 chr2 11662432 11663054 -239024800 + L1PA7 LINE L1 5527 6152 -2 314 331 101 22 chr2 11663372 11663511 -239024343 + L2 LINE L2 3122 3271 -1 419 345 46 11 chr2 11664738 11664912 -239022942 + MIR SINE MIR 47 226 -36 302 205 13 77 chr2 11664914 11664992 -239022862 - MIR3 SINE MIR -42 166 94 236 312 66 9 chr2 11665043 11665151 -239022703 - MIR SINE MIR -110 98 22 218 277 90 77 chr2 11665473 11665628 -239022226 + MIR SINE MIR 48 204 -58 254 308 39 0 chr2 11665844 11665922 -239021932 + MIR SINE MIR 118 198 -64 222 309 52 21 chr2 11667431 11667528 -239020326 + MIR SINE MIR 72 171 -91 198 258 200 71 chr2 11668051 11668206 -239019648 + MIR SINE MIR 88 262 0 22 0 0 0 chr2 11668571 11668593 -239019261 + AT_rich Low_complexity Low_complexity 1 22 0 2220 136 21 104 chr2 11669513 11669984 -239017870 - MSTB1 LTR MaLR 0 432 1 408 311 25 0 chr2 11670373 11670492 -239017362 - L2 LINE L2 -15 3298 3177 188 344 115 8 chr2 11670567 11670689 -239017165 + L2 LINE L2 2627 2761 -553 363 300 67 29 chr2 11671542 11671752 -239016102 - L2 LINE L2 -371 2943 2726 230 366 0 9 chr2 11672223 11672335 -239015519 - MER91C DNA MER1_type 0 140 30 182 245 151 0 chr2 11672734 11672787 -239015067 + L2 LINE L2 3161 3221 -51 279 0 0 0 chr2 11672876 11672907 -239014947 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 220 307 80 13 chr2 11673668 11673743 -239014111 - L2 LINE L2 -27 3245 3166 4740 162 29 46 chr2 11673856 11674743 -239013111 + MER4D LTR ERV1 1 872 0 218 231 77 0 chr2 11674756 11674808 -239013046 + MIR SINE MIR 93 148 -60 465 125 0 0 chr2 11676010 11676082 -239011772 - L1P LINE L1 -747 5409 5338 4926 121 23 6 chr2 11676083 11676811 -239011043 + L1PA16 LINE L1 5426 6166 0 1699 187 59 44 chr2 11676811 11677191 -239010663 + Charlie1 DNA MER1_type 2149 2540 -221 2337 54 4 0 chr2 11677191 11677495 -239010359 + AluY SINE Alu 2 306 0 1699 187 59 44 chr2 11677495 11677588 -239010266 + Charlie1 DNA MER1_type 2540 2630 -131 306 344 52 28 chr2 11677791 11678154 -239009700 - HAL1b LINE L1 -809 539 168 260 280 129 8 chr2 11680305 11680437 -239007417 + MIR3 SINE MIR 40 187 -21 316 350 55 31 chr2 11680578 11680741 -239007113 + L2 LINE L2 3096 3262 -10 272 297 0 14 chr2 11680993 11681067 -239006787 - L2 LINE L2 0 3272 3200 1975 153 3 0 chr2 11681637 11681937 -239005917 - AluJb SINE Alu -11 301 1 182 216 27 0 chr2 11682125 11682162 -239005692 + MIR SINE MIR 85 122 -140 1629 201 23 50 chr2 11684837 11685221 -239002633 - MLT1A2 LTR MaLR 0 374 1 1513 161 50 101 chr2 11685294 11685672 -239002182 + MLT1A1 LTR MaLR 5 363 -2 410 280 62 101 chr2 11686493 11686685 -239001169 - L2 LINE L2 0 3272 3074 3383 187 94 13 chr2 11686685 11687358 -239000496 - LTR8A LTR ERV1 0 727 1 410 280 62 101 chr2 11687358 11687899 -238999955 - L2 LINE L2 -198 3074 2551 319 309 99 25 chr2 11689098 11689341 -238998513 + MIR SINE MIR 2 262 0 214 338 14 14 chr2 11689865 11689939 -238997915 + MIR SINE MIR 21 94 -114 237 65 0 0 chr2 11690710 11690741 -238997113 + (A)n Simple_repeat Simple_repeat 1 31 0 183 421 33 8 chr2 11691635 11691756 -238996098 - L2 LINE L2 -1 3271 3148 265 381 24 0 chr2 11692140 11692266 -238995588 - L2 LINE L2 -212 3060 2932 290 241 213 21 chr2 11692847 11692988 -238994866 + MIR3 SINE MIR 36 203 -5 197 347 165 0 chr2 11693077 11693198 -238994656 - MIR SINE MIR -16 246 106 1088 232 66 74 chr2 11693769 11694149 -238993705 - MLT1B LTR MaLR -4 386 10 447 289 39 56 chr2 11694249 11694350 -238993504 + MER5B DNA MER1_type 2 103 -75 2051 151 74 57 chr2 11694350 11694389 -238993465 - MLT2D LTR ERVL 0 414 377 384 22 0 0 chr2 11694389 11694434 -238993420 + (TG)n Simple_repeat Simple_repeat 2 46 0 2051 151 74 57 chr2 11694434 11694798 -238993056 - MLT2D LTR ERVL -37 377 4 447 289 39 56 chr2 11694798 11694810 -238993044 + MER5B DNA MER1_type 103 114 -64 2187 117 0 16 chr2 11694810 11695119 -238992735 - AluSx SINE Alu -8 304 1 447 289 39 56 chr2 11695119 11695184 -238992670 + MER5B DNA MER1_type 114 178 0 366 198 76 151 chr2 11695310 11695482 -238992372 - MER5B DNA MER1_type -3 175 17 183 125 75 25 chr2 11696343 11696383 -238991471 - MIR SINE MIR -185 77 36 498 218 0 0 chr2 11696416 11696572 -238991282 + (CA)n Simple_repeat Simple_repeat 2 157 0 291 324 65 74 chr2 11696574 11697019 -238990835 - L2 LINE L2 -13 3259 2819 2363 105 0 0 chr2 11697353 11697657 -238990197 + AluSx SINE Alu 1 304 -8 194 429 14 23 chr2 11697704 11697923 -238989931 + L2 LINE L2 2867 3083 -189 2169 173 52 26 chr2 11698246 11698667 -238989187 + MSTB1 LTR MaLR 1 432 0 1881 176 0 0 chr2 11699107 11699402 -238988452 + AluJo SINE Alu 1 295 -17 424 275 101 7 chr2 11700397 11700546 -238987308 - MLT1L LTR MaLR -123 492 330 7073 97 34 3 chr2 11701317 11702347 -238985507 + L1MA1 LINE L1 5238 6298 -4 2374 78 7 0 chr2 11702840 11703136 -238984718 + AluY SINE Alu 1 298 -13 311 263 150 15 chr2 11703143 11703276 -238984578 - MIR3 SINE MIR -28 180 30 1833 156 17 0 chr2 11703604 11703771 -238984083 - AluSx SINE Alu -12 300 124 279 0 0 0 chr2 11703771 11703802 -238984052 + (TG)n Simple_repeat Simple_repeat 2 32 0 1833 156 17 0 chr2 11703802 11703929 -238983925 - AluSx SINE Alu -188 124 1 355 313 53 0 chr2 11704079 11704210 -238983644 - MIR SINE MIR -37 225 88 1137 245 66 78 chr2 11706647 11707071 -238980783 + MLT1H LTR MaLR 3 421 -128 357 330 38 16 chr2 11707173 11707358 -238980496 - L2 LINE L2 -477 2837 2649 437 269 31 51 chr2 11708623 11708809 -238979045 - MIR SINE MIR -78 130 3 184 254 84 28 chr2 11708815 11708886 -238978968 - MIR3 SINE MIR -53 155 81 551 234 16 0 chr2 11709663 11709787 -238978067 - MER45A DNA AcHobo 0 178 53 367 343 12 35 chr2 11709994 11710166 -238977688 - MIR3 SINE MIR -37 171 4 273 323 129 46 chr2 11711132 11711349 -238976505 + L2 LINE L2 2185 2419 -895 515 289 109 0 chr2 11711558 11711714 -238976140 - MIR SINE MIR -84 178 6 1907 197 7 61 chr2 11711715 11712126 -238975728 + MLT1B LTR MaLR 2 390 0 201 245 0 0 chr2 11712834 11712883 -238974971 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 267 248 50 50 chr2 11712905 11713026 -238974828 - LTR67 LTR ERVL -8 549 429 1360 209 26 11 chr2 11713862 11714135 -238973719 - AluJo SINE Alu -30 282 6 258 300 17 0 chr2 11714549 11714654 -238973200 + MIR SINE MIR 59 166 -64 1427 194 101 44 chr2 11714673 11715039 -238972815 - L1MB2 LINE L1 0 6171 5785 * 1450 215 34 11 chr2 11715037 11715419 -238972435 - L1M4c LINE L1 -3987 2397 2007 941 178 7 0 chr2 11715447 11715599 -238972255 - FRAM SINE Alu -30 146 1 455 230 0 58 chr2 11715609 11715748 -238972106 - L1M4c LINE L1 -4479 1905 1775 23 33 0 0 chr2 11715759 11715789 -238972065 + AT_rich Low_complexity Low_complexity 1 30 0 3411 11 0 0 chr2 11716149 11716526 -238971328 - L1HS LINE L1 -2 6153 5777 4526 21 0 0 chr2 11716526 11717049 -238970805 + L1P LINE L1 4245 4767 -1379 292 283 61 10 chr2 11717682 11717781 -238970073 + MIR SINE MIR 44 147 -61 2861 142 12 25 chr2 11718930 11719415 -238968439 + L1MA5 LINE L1 5812 6290 -10 251 336 185 14 chr2 11719576 11719722 -238968132 - MIR SINE MIR -64 144 22 200 323 95 13 chr2 11720229 11720387 -238967467 + MIR SINE MIR 86 256 -6 227 327 89 71 chr2 11720602 11720770 -238967084 - MIR SINE MIR -75 187 17 266 320 76 33 chr2 11723477 11723628 -238964226 + MIR3 SINE MIR 1 162 -66 240 278 106 33 chr2 11724056 11724207 -238963647 + MIR SINE MIR 48 209 -53 204 349 48 60 chr2 11724877 11724960 -238962894 - L2 LINE L2 -29 3243 3162 * 348 372 31 21 chr2 11724955 11725146 -238962708 - L2 LINE L2 -568 2746 2554 635 295 74 9 chr2 11725177 11725394 -238962460 - MIR SINE MIR -14 248 18 944 268 15 7 chr2 11725799 11726068 -238961786 - L1ME LINE L1 -505 5661 5391 5179 123 80 5 chr2 11726078 11726924 -238960930 - Tigger1 DNA MER2_type -1508 910 1 605 260 85 0 chr2 11726924 11727170 -238960684 - L1ME LINE L1 -1513 4633 4367 304 295 0 13 chr2 11727622 11727700 -238960154 + MIR SINE MIR 52 128 -80 633 299 120 4 chr2 11727815 11728049 -238959805 - MIR SINE MIR 0 262 2 248 186 0 17 chr2 11728079 11728138 -238959716 + L1MCa LINE L1 2006 2063 -4363 212 189 0 0 chr2 11728187 11728224 -238959630 + (TA)n Simple_repeat Simple_repeat 1 37 0 235 291 149 30 chr2 11729853 11729987 -238957867 - MIR3 SINE MIR -17 191 42 1949 119 46 3 chr2 11729995 11730280 -238957574 + AluSx SINE Alu 1 297 -15 2897 6 0 0 chr2 11730464 11730775 -238957079 + AluYb8 SINE Alu 3 313 -5 761 185 1 10 chr2 11731094 11731240 -238956614 + MLT1C LTR MaLR 337 466 -1 261 346 6 27 chr2 11731450 11731622 -238956232 - MIR SINE MIR -64 198 35 383 328 143 51 chr2 11732097 11732260 -238955594 - L3 LINE CR1 -3 1574 1427 1909 128 35 0 chr2 11732260 11732542 -238955312 - AluSx SINE Alu -20 292 1 383 328 143 51 chr2 11732542 11732671 -238955183 - L3 LINE CR1 -150 1427 1255 189 107 0 0 chr2 11732731 11732759 -238955095 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 287 276 16 81 chr2 11732793 11732840 -238955014 - MIR SINE MIR 0 262 214 1835 205 65 75 chr2 11732840 11733396 -238954458 + MLT2B3 LTR ERVL 1 550 -4 287 276 16 81 chr2 11733396 11733471 -238954383 - MIR SINE MIR -48 214 148 232 305 65 52 chr2 11734605 11734870 -238952984 - L2 LINE L2 -92 3180 2860 1160 307 132 11 chr2 11735256 11735725 -238952129 - MLT1G LTR MaLR -55 535 10 1302 270 81 41 chr2 11736791 11737358 -238950496 - MLT1G LTR MaLR 0 590 1 474 291 174 34 chr2 11737373 11737844 -238950010 - L2 LINE L2 -901 2413 1877 21 89 0 0 chr2 11737859 11737915 -238949939 + AT_rich Low_complexity Low_complexity 1 56 0 220 292 21 62 chr2 11738143 11738239 -238949615 + L2 LINE L2 1038 1129 -2185 353 316 76 0 chr2 11738265 11738423 -238949431 + L2 LINE L2 1256 1425 -1889 416 260 79 0 chr2 11739349 11739476 -238948378 + L2 LINE L2 3169 3305 -8 3233 155 38 2 chr2 11740162 11740736 -238947118 + LTR49 LTR ERV1 1 595 0 24 32 0 0 chr2 11741062 11741093 -238946761 + AT_rich Low_complexity Low_complexity 1 31 0 379 149 68 27 chr2 11741427 11741501 -238946353 - LTR29 LTR ERV1 -115 503 404 343 150 0 0 chr2 11742458 11742518 -238945336 - L1PA16 LINE L1 -10 6156 6097 29 28 0 0 chr2 11743669 11743705 -238944149 + AT_rich Low_complexity Low_complexity 1 36 0 536 207 174 117 chr2 11743892 11744284 -238943570 - LTR50 LTR ERVL -324 471 58 195 129 0 0 chr2 11744429 11744460 -238943394 + (A)n Simple_repeat Simple_repeat 1 31 0 696 277 51 45 chr2 11744805 11745141 -238942713 - L1MC4 LINE L1 -571 7471 7134 1842 196 92 37 chr2 11745141 11745596 -238942258 + MLT2B1 LTR ERVL 1 480 -40 491 85 51 40 chr2 11745624 11745801 -238942053 + (TA)n Simple_repeat Simple_repeat 2 180 0 258 122 52 26 chr2 11745813 11745928 -238941926 + (TA)n Simple_repeat Simple_repeat 2 119 0 268 163 0 0 chr2 11745928 11745977 -238941877 + MLT2B1 LTR ERVL 464 512 -8 360 273 37 12 chr2 11745998 11746159 -238941695 - L1MC4 LINE L1 -937 7105 6941 671 299 85 16 chr2 11746803 11747357 -238940497 - L1MC4 LINE L1 -977 6831 6277 1333 187 93 22 chr2 11747503 11747771 -238940083 + AluJb SINE Alu 3 289 -23 215 226 151 54 chr2 11748079 11748172 -238939682 + MIR SINE MIR 96 197 -65 402 270 68 75 chr2 11750167 11750460 -238937394 - MLT1I LTR MaLR -22 387 97 1269 227 14 50 chr2 11750472 11750833 -238937021 + MLT2C1 LTR ERVL 50 397 0 24 32 0 0 chr2 11751000 11751031 -238936823 + AT_rich Low_complexity Low_complexity 1 31 0 252 288 0 25 chr2 11751090 11751170 -238936684 - L1ME3A LINE L1 -73 6097 6020 183 271 186 25 chr2 11751451 11751569 -238936285 - MIR SINE MIR -30 232 96 192 125 0 0 chr2 11752002 11752034 -238935820 + (TC)n Simple_repeat Simple_repeat 1 32 0 189 196 0 0 chr2 11752033 11752079 -238935775 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 348 246 15 41 chr2 11752153 11752348 -238935506 - L1MC5 LINE L1 -271 7690 7501 564 267 0 0 chr2 11752362 11752493 -238935361 - MER3 DNA MER1_type -78 131 1 2000 104 0 0 chr2 11752563 11752842 -238935012 + L1PA8 LINE L1 5887 6165 -7 1777 255 35 50 chr2 11752939 11753679 -238934175 - L1MC4 LINE L1 -544 7498 6770 182 119 34 34 chr2 11754193 11754252 -238933602 + (TA)n Simple_repeat Simple_repeat 1 59 0 312 108 50 42 chr2 11754267 11754387 -238933467 + (TA)n Simple_repeat Simple_repeat 1 121 0 2089 62 0 0 chr2 11754445 11754718 -238933136 + AluY SINE Alu 39 311 0 352 316 64 32 chr2 11754999 11755186 -238932668 - HsTC2 DNA Tc2 -1007 891 699 308 328 138 11 chr2 11755212 11755401 -238932453 - L1ME1 LINE L1 -5 6161 5949 259 229 0 0 chr2 11755415 11755476 -238932378 - L1ME1 LINE L1 -272 5894 5834 2760 83 11 8 chr2 11755760 11756134 -238931720 + THE1C LTR MaLR 1 375 0 314 241 9 36 chr2 11756192 11756304 -238931550 + L1ME4a LINE L1 5741 5849 -272 368 266 84 0 chr2 11756325 11756479 -238931375 + L1ME4a LINE L1 5944 6110 -11 3865 44 0 0 chr2 11756932 11757411 -238930443 + L1P LINE L1 4742 5220 -926 31 0 0 0 chr2 11757840 11757871 -238929983 + AT_rich Low_complexity Low_complexity 1 31 0 1074 275 121 20 chr2 11758703 11759201 -238928653 - MLT1H LTR MaLR 0 549 2 2345 51 7 0 chr2 11759315 11759609 -238928245 + L1PA6 LINE L1 5847 6142 -12 294 146 18 0 chr2 11759648 11759703 -238928151 + MSTA LTR MaLR 373 428 0 4004 238 11 31 chr2 11760025 11761276 -238926578 - L1 LINE L1 -2979 3167 1937 1230 102 20 11 chr2 11761438 11761647 -238926207 + MLT2A2 LTR ERVL 293 453 0 1226 248 58 31 chr2 11761649 11762026 -238925828 - L1ME LINE L1 -3362 2718 2322 1734 167 27 46 chr2 11762026 11762398 -238925456 - MLT1A1 LTR MaLR 0 365 1 1226 248 58 31 chr2 11762398 11762533 -238925321 - L1ME LINE L1 -3758 2322 2192 657 153 0 0 chr2 11762535 11762633 -238925221 - Tigger3(Golem) DNA MER2_type -2 3027 2930 * 2919 158 55 8 chr2 11762624 11763135 -238924719 - Tigger3b DNA MER2_type -696 535 1 1855 274 77 80 chr2 11763144 11764331 -238923523 - L1ME LINE L1 -4052 2209 970 231 36 0 0 chr2 11764331 11764359 -238923495 + (TC)n Simple_repeat Simple_repeat 2 29 0 1855 274 77 80 chr2 11764359 11765322 -238922532 - L1ME LINE L1 -5291 970 6 292 348 100 24 chr2 11765448 11765827 -238922027 - L2 LINE L2 -641 2673 2266 212 167 0 0 chr2 11767007 11767043 -238920811 + (TATG)n Simple_repeat Simple_repeat 2 37 0 558 281 30 90 chr2 11767048 11767315 -238920539 - MIR SINE MIR -10 252 2 24 0 0 0 chr2 11767494 11767518 -238920336 + AT_rich Low_complexity Low_complexity 1 24 0 594 299 48 24 chr2 11767718 11768196 -238919658 + MLT1H1 LTR MaLR 1 587 -8 494 187 29 14 chr2 11768274 11768413 -238919441 - MER69 DNA AcHobo -9 2517 2377 1346 225 126 6 chr2 11768672 11769006 -238918848 + MLT1A2 LTR MaLR 1 374 0 351 276 11 0 chr2 11769083 11769170 -238918684 + GA-rich Low_complexity Low_complexity 3 90 0 1421 216 35 37 chr2 11769404 11769779 -238918075 - MLT1A2 LTR MaLR 0 374 1 225 159 0 0 chr2 11770370 11770414 -238917440 + GA-rich Low_complexity Low_complexity 1 44 0 1309 241 108 50 chr2 11770420 11771206 -238916648 - L1MEc LINE L1 -3961 3161 2330 941 75 37 8 chr2 11771206 11771340 -238916514 + MSTB1 LTR MaLR 295 432 0 481 313 69 41 chr2 11771343 11771663 -238916191 - L1MEc LINE L1 -5335 1088 760 955 257 89 60 chr2 11771835 11772305 -238915549 - L1MEc LINE L1 -5923 500 17 387 141 0 0 chr2 11772365 11772429 -238915425 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 240 225 43 130 chr2 11772483 11772621 -238915233 - MIR SINE MIR -2 260 135 228 313 46 61 chr2 11772778 11772909 -238914945 - MIR SINE MIR -58 150 22 22 56 0 0 chr2 11773137 11773173 -238914681 + AT_rich Low_complexity Low_complexity 1 36 0 242 243 43 29 chr2 11773742 11773812 -238914042 + MIR SINE MIR 60 130 -78 195 42 0 0 chr2 11774077 11774101 -238913753 + (TTA)n Simple_repeat Simple_repeat 1 24 0 513 274 59 41 chr2 11775357 11775576 -238912278 - MIR SINE MIR -27 235 13 1270 194 43 25 chr2 11776486 11776810 -238911044 - L1ME LINE L1 -368 5796 5467 2030 134 64 19 chr2 11776913 11777272 -238910582 + THE1C LTR MaLR 1 375 0 9768 121 31 38 chr2 11777272 11778863 -238908991 + THE1C-int LTR MaLR 1 1580 0 2111 129 64 14 chr2 11778865 11779222 -238908632 + THE1C LTR MaLR 1 375 0 480 291 92 5 chr2 11779299 11779495 -238908359 + MIR SINE MIR 37 249 -13 243 308 0 22 chr2 11780047 11780138 -238907716 + CT-rich Low_complexity Low_complexity 2 90 0 240 35 0 0 chr2 11780144 11780173 -238907681 + (CA)n Simple_repeat Simple_repeat 2 30 0 252 0 0 0 chr2 11780474 11780502 -238907352 + (GA)n Simple_repeat Simple_repeat 1 28 0 293 231 71 108 chr2 11780523 11780671 -238907183 + MIR SINE MIR 31 170 -92 207 0 0 0 chr2 11780671 11780694 -238907160 + (TATG)n Simple_repeat Simple_repeat 2 24 0 293 231 71 108 chr2 11780694 11780757 -238907097 + MIR SINE MIR 170 234 -28 1372 185 59 72 chr2 11780789 11781178 -238906676 + MLT1B LTR MaLR 3 386 -4 1449 127 5 0 chr2 11781451 11781670 -238906184 - MSTA LTR MaLR -10 418 199 1988 157 65 35 chr2 11781670 11782185 -238905669 - MLT2A2 LTR ERVL 0 554 3 1093 128 96 5 chr2 11782186 11782373 -238905481 - MSTA LTR MaLR -224 204 1 196 311 76 30 chr2 11783015 11783147 -238904707 + MIR SINE MIR 119 256 -6 231 217 35 35 chr2 11783246 11783311 -238904543 + MIR SINE MIR 86 143 -65 22 80 0 0 chr2 11784081 11784131 -238903723 + AT_rich Low_complexity Low_complexity 1 50 0 334 323 60 23 chr2 11784289 11784506 -238903348 + MLT1H LTR MaLR 84 308 -241 1699 204 64 3 chr2 11784656 11785000 -238902854 + MLT1A1 LTR MaLR 1 365 0 2481 84 3 3 chr2 11785775 11786108 -238901746 - L1PA8A LINE L1 -4 6127 5795 36883 41 24 2 chr2 11786426 11791723 -238896131 - L1PA3 LINE L1 -226 5929 513 2933 20 9 0 chr2 11791823 11792223 -238895631 + L1PA2 LINE L1 5808 6210 0 854 90 0 0 chr2 11792246 11792368 -238895486 + L1PA7 LINE L1 5814 5935 -219 2404 80 0 3 chr2 11792405 11792704 -238895150 - AluY SINE Alu -13 298 1 438 314 128 19 chr2 11792725 11793103 -238894751 - L1M4 LINE L1 -2153 3993 3577 504 72 0 0 chr2 11793468 11793537 -238894317 + (TC)n Simple_repeat Simple_repeat 1 69 0 344 369 118 27 chr2 11794001 11794649 -238893205 - L1MEd LINE L1 -744 1746 948 27 0 0 0 chr2 11795799 11795826 -238892028 + AT_rich Low_complexity Low_complexity 1 27 0 1371 233 76 35 chr2 11796515 11797055 -238890799 + HsTC2a DNA Tc2 145 706 -38 181 257 27 54 chr2 11797122 11797196 -238890658 - L2 LINE L2 -4 3268 3197 21 0 0 0 chr2 11797931 11797952 -238889902 + AT_rich Low_complexity Low_complexity 1 21 0 348 24 0 0 chr2 11798200 11798241 -238889613 + (CA)n Simple_repeat Simple_repeat 2 42 0 3288 54 14 0 chr2 11798373 11798818 -238889036 - L1P LINE L1 -5691 455 5 1235 56 0 0 chr2 11798818 11798980 -238888874 - L1PA7 LINE L1 -324 5830 5669 1483 104 0 9 chr2 11798980 11799196 -238888658 + L1PA7 LINE L1 5932 6151 -3 985 181 84 13 chr2 11799299 11799602 -238888252 + MER33 DNA MER1_type 1 318 -6 347 335 101 18 chr2 11799611 11799889 -238887965 + L1MC/D LINE L1 4133 4433 -1713 28 79 0 0 chr2 11799961 11800024 -238887830 + AT_rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr2 11800413 11800442 -238887412 + AT_rich Low_complexity Low_complexity 1 29 0 338 318 22 45 chr2 11800448 11800938 -238886916 + L1MC/D LINE L1 5037 5514 -650 257 326 0 101 chr2 11800957 11801095 -238886759 - MER5B DNA MER1_type -49 129 6 509 336 79 40 chr2 11801335 11801846 -238886008 + L1 LINE L1 3838 4379 -1767 2147 116 7 10 chr2 11801846 11802147 -238885707 - AluSx SINE Alu -12 300 1 509 336 79 40 chr2 11802147 11802257 -238885597 + L1 LINE L1 4379 4483 -1663 274 235 70 20 chr2 11803551 11803652 -238884202 + MIR SINE MIR 95 200 -58 806 292 132 37 chr2 11804012 11804467 -238883387 - L3 LINE CR1 -1 1576 1079 23 33 0 0 chr2 11805969 11805999 -238881855 + AT_rich Low_complexity Low_complexity 1 30 0 769 307 40 33 chr2 11806906 11807235 -238880619 - MLT1J2 LTR MaLR -118 332 2 56 16 0 0 chr2 11809717 11809780 -238878074 + AT_rich Low_complexity Low_complexity 1 63 0 377 317 8 16 chr2 11809828 11809951 -238877903 - MIR SINE MIR -66 142 21 476 204 186 66 chr2 11810019 11810186 -238877668 - MER5A DNA MER1_type -1 188 2 242 317 30 10 chr2 11811575 11811676 -238876178 - MIR SINE MIR -102 160 58 2362 108 0 0 chr2 11812082 11812388 -238875466 + AluSx SINE Alu 1 306 -6 186 400 50 0 chr2 11812685 11812805 -238875049 - MIR SINE MIR -90 172 47 252 0 0 0 chr2 11814186 11814214 -238873640 + (CA)n Simple_repeat Simple_repeat 1 28 0 295 323 173 27 chr2 11814296 11814556 -238873298 - L2 LINE L2 -42 3230 2933 433 147 0 13 chr2 11815384 11815459 -238872395 + L1M2 LINE L1 5691 5764 -548 21 36 0 0 chr2 11815612 11815640 -238872214 + AT_rich Low_complexity Low_complexity 1 28 0 320 339 95 23 chr2 11816044 11816265 -238871589 + MIR SINE MIR 5 241 -21 352 284 39 0 chr2 11818005 11818107 -238869747 + MIR SINE MIR 47 152 -110 334 141 125 0 chr2 11819383 11819447 -238868407 + LTR33A LTR ERVL 448 519 -4 323 229 8 38 chr2 11819569 11819700 -238868154 + (TA)n Simple_repeat Simple_repeat 1 127 0 292 302 117 45 chr2 11819746 11819968 -238867886 - L2 LINE L2 -452 2862 2625 2456 258 66 6 chr2 11820508 11821201 -238866653 + MER69 DNA AcHobo 1 735 -1791 1032 241 114 5 chr2 11821213 11821590 -238866264 + MER69 DNA AcHobo 1840 2257 -269 239 254 63 0 chr2 11821816 11821879 -238865975 - MIR SINE MIR 0 262 196 275 308 25 42 chr2 11822093 11822213 -238865641 + MIR SINE MIR 8 125 -137 271 368 85 46 chr2 11822518 11822847 -238865007 + L2 LINE L2 2832 3173 -99 2621 40 0 0 chr2 11822847 11823150 -238864704 - AluY SINE Alu -8 303 1 8722 107 11 1 chr2 11823404 11824672 -238863182 - HSMAR1 DNA Mariner -1 1286 6 698 257 103 24 chr2 11824820 11825073 -238862781 - MLT1B LTR MaLR -15 375 103 615 246 7 0 chr2 11825077 11825219 -238862635 + L1PB4 LINE L1 6013 6155 -1 508 129 119 30 chr2 11825228 11825329 -238862525 - MLT1B LTR MaLR -280 110 1 366 331 147 11 chr2 11826791 11826975 -238860879 + MIR SINE MIR 23 231 -31 365 356 47 5 chr2 11827302 11827493 -238860361 + MIR SINE MIR 32 230 -32 235 314 164 21 chr2 11827811 11827951 -238859903 + MIR SINE MIR 29 188 -74 3887 97 15 2 chr2 11828391 11828938 -238858916 - MER41A LTR ERV1 0 554 1 201 175 0 0 chr2 11829194 11829234 -238858620 + CT-rich Low_complexity Low_complexity 2 41 0 228 240 0 40 chr2 11829542 11829617 -238858237 + MLT1G LTR MaLR 517 588 -2 241 243 14 14 chr2 11829624 11829694 -238858160 + MLT1G-int LTR MaLR 6 75 -1296 471 335 23 16 chr2 11829762 11830066 -238857788 + MLT1G-int LTR MaLR 270 575 -796 1383 214 4 71 chr2 11830672 11831027 -238856827 - L1 LINE L1 -758 5388 5072 2165 137 3 0 chr2 11831027 11831334 -238856520 - AluSx SINE Alu -4 308 1 1383 214 4 71 chr2 11831334 11831455 -238856399 - L1 LINE L1 -1074 5072 4944 663 214 46 31 chr2 11831636 11831832 -238856022 - L1 LINE L1 -1218 4928 4730 4084 177 39 32 chr2 11831848 11832764 -238855090 + L1MA10 LINE L1 5411 6333 -1 245 280 75 11 chr2 11833204 11833297 -238854557 + MLT1F LTR MaLR 52 150 -445 440 215 97 48 chr2 11833393 11833618 -238854236 + MLT1F LTR MaLR 331 590 0 180 0 0 0 chr2 11834426 11834446 -238853408 + (A)n Simple_repeat Simple_repeat 1 20 0 182 114 0 29 chr2 11834971 11835006 -238852848 + (GGAGAA)n Simple_repeat Simple_repeat 4 37 0 24 32 0 0 chr2 11835153 11835184 -238852670 + AT_rich Low_complexity Low_complexity 1 31 0 372 340 71 20 chr2 11835596 11835793 -238852061 + MIR SINE MIR 56 262 0 565 266 73 48 chr2 11835827 11836226 -238851628 + HAL1b LINE L1 374 782 -566 250 247 23 6 chr2 11837610 11837784 -238850070 + (TA)n Simple_repeat Simple_repeat 1 177 0 237 208 56 0 chr2 11838264 11838336 -238849518 + L1ME LINE L1 512 587 -5483 2485 201 32 10 chr2 11838527 11839118 -238848736 + L1MB7 LINE L1 5576 6179 -5 361 295 69 107 chr2 11839121 11839338 -238848516 + L1ME3A LINE L1 4601 4825 -1321 1994 97 7 29 chr2 11839338 11839616 -238848238 + AluY SINE Alu 27 298 -13 361 295 69 107 chr2 11839616 11840063 -238847791 + L1ME3A LINE L1 4825 5240 -906 426 261 81 6 chr2 11840331 11840492 -238847362 - L1M4 LINE L1 -2830 3316 3144 1774 89 0 8 chr2 11840492 11840727 -238847127 - AluY SINE Alu 0 311 79 2424 108 68 21 chr2 11840727 11841154 -238846700 + LTR7 LTR ERV1 1 447 -3 19055 93 6 29 chr2 11841157 11844223 -238843631 + HERVH LTR ERV1 1 2995 -4718 827 136 27 0 chr2 11844202 11844349 -238843505 + HERVH LTR ERV1 3140 3290 -4423 * 3220 112 4 2 chr2 11844339 11844840 -238843014 + HERVH LTR ERV1 3492 3993 -3720 3527 135 71 22 chr2 11844842 11845473 -238842381 + HERVH LTR ERV1 4488 5149 -2564 1288 115 53 0 chr2 11845474 11845683 -238842171 + HERVH LTR ERV1 5600 5819 -1894 2238 94 51 3 chr2 11845683 11846055 -238841799 + HERVH LTR ERV1 7324 7713 0 2528 104 60 21 chr2 11846055 11846486 -238841368 + LTR7 LTR ERV1 1 448 -2 573 145 0 0 chr2 11846488 11846571 -238841283 - AluY SINE Alu -227 83 1 1069 281 45 70 chr2 11846651 11846941 -238840913 + L1ME3A LINE L1 5294 5590 -580 2149 106 0 0 chr2 11846941 11847245 -238840609 + AluSc SINE Alu 1 304 0 1069 281 45 70 chr2 11847245 11847843 -238840011 + L1ME3A LINE L1 5590 6157 -13 208 323 0 0 chr2 11849469 11849531 -238838323 + MIR SINE MIR 83 144 -64 183 286 39 26 chr2 11850527 11850604 -238837250 - L2 LINE L2 0 3272 3195 217 192 20 25 chr2 11850633 11850838 -238837016 + (TA)n Simple_repeat Simple_repeat 1 203 0 884 233 147 8 chr2 11850841 11851152 -238836702 - MLT2B1 LTR ERVL -21 533 137 187 398 19 19 chr2 11851566 11851674 -238836180 + MIR SINE MIR 36 143 -65 24 0 0 0 chr2 11851726 11851750 -238836104 + AT_rich Low_complexity Low_complexity 1 24 0 6665 67 10 1 chr2 11851906 11852915 -238834939 + L1PA7 LINE L1 5025 6150 -4 328 332 133 5 chr2 11853153 11853341 -238834513 - MIR SINE MIR -10 252 42 1923 201 15 20 chr2 11853593 11853991 -238833863 - MSTD LTR MaLR 0 396 1 299 263 0 19 chr2 11854305 11854475 -238833379 + L1MDb LINE L1 1413 1617 -5071 6151 92 20 1 chr2 11854518 11855822 -238832032 + L1PA10 LINE L1 4834 6151 -17 289 307 57 12 chr2 11855822 11856043 -238831811 + L1MDb LINE L1 1449 1673 -4869 210 379 61 0 chr2 11857713 11857779 -238830075 + L2 LINE L2 3111 3180 -92 205 250 7 157 chr2 11858418 11858558 -238829296 + L2 LINE L2 3138 3256 -16 937 291 14 36 chr2 11858899 11859257 -238828597 + MLT1J2 LTR MaLR 25 374 -76 181 362 53 0 chr2 11859843 11859937 -238827917 + L3 LINE CR1 1425 1523 -54 415 314 59 18 chr2 11860072 11860292 -238827562 + MIR SINE MIR 2 230 -32 869 211 6 0 chr2 11860512 11860668 -238827186 + FAM SINE Alu 1 157 -18 361 323 51 0 chr2 11860871 11861029 -238826825 - MIR SINE MIR -4 258 93 249 288 0 72 chr2 11861789 11861900 -238825954 + MIR SINE MIR 37 139 -69 199 325 125 42 chr2 11862492 11862612 -238825242 + MIR3 SINE MIR 1 130 -78 296 154 0 0 chr2 11862792 11862844 -238825010 - L1MB8 LINE L1 -10 6168 6117 2017 134 0 25 chr2 11864307 11864627 -238823227 + AluSx SINE Alu 1 312 0 405 209 12 12 chr2 11865470 11865556 -238822298 - MER81 DNA DNA 0 114 29 666 329 133 22 chr2 11865566 11866055 -238821799 + L2 LINE L2 2211 2753 -561 276 149 0 0 chr2 11866474 11866521 -238821333 + (TC)n Simple_repeat Simple_repeat 2 48 0 380 288 84 20 chr2 11866661 11867053 -238820801 - L1MC4 LINE L1 0 8042 7506 2826 74 33 3 chr2 11867306 11867697 -238820157 + MLT2A1 LTR ERVL 1 403 -41 319 154 39 10 chr2 11867714 11867818 -238820036 + (TA)n Simple_repeat Simple_repeat 1 107 0 23 0 0 0 chr2 11867818 11867841 -238820013 + AT_rich Low_complexity Low_complexity 1 23 0 279 116 0 0 chr2 11867861 11867904 -238819950 + MLT2A1 LTR ERVL 402 444 0 481 281 14 22 chr2 11868103 11868242 -238819612 + L2 LINE L2 3168 3305 -8 294 29 0 0 chr2 11869381 11869416 -238818438 + (TC)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 11869535 11869556 -238818298 + AT_rich Low_complexity Low_complexity 1 21 0 201 184 36 25 chr2 11869588 11869878 -238817976 + (TA)n Simple_repeat Simple_repeat 1 293 0 210 205 68 8 chr2 11869924 11870041 -238817813 + (TA)n Simple_repeat Simple_repeat 2 125 0 187 154 19 19 chr2 11870088 11870140 -238817714 + (TA)n Simple_repeat Simple_repeat 2 53 0 1128 239 112 29 chr2 11870193 11870540 -238817314 - MLT2B1 LTR ERVL -137 383 8 184 375 0 0 chr2 11871005 11871069 -238816785 + MIR SINE MIR 78 141 -67 3410 8 0 0 chr2 11871741 11872126 -238815728 - L1PA2 LINE L1 0 6155 5771 4272 20 0 0 chr2 11872126 11872766 -238815088 + L1PA2 LINE L1 5134 5773 -382 1365 212 39 69 chr2 11873186 11873677 -238814177 - L1MA10 LINE L1 -3 6331 5856 395 227 35 93 chr2 11874005 11874131 -238813723 + MER96B DNA MER1_type? 1 116 -301 1812 132 62 14 chr2 11874131 11874419 -238813435 + AluSx SINE Alu 1 302 -10 395 227 35 93 chr2 11874419 11874464 -238813390 + MER96B DNA MER1_type? 116 162 -255 199 330 68 48 chr2 11874929 11875032 -238812822 - L2 LINE L2 -14 3258 3154 206 323 86 21 chr2 11876070 11876163 -238811691 - L2 LINE L2 -32 3240 3142 261 119 0 0 chr2 11877302 11877344 -238810510 + (TTCC)n Simple_repeat Simple_repeat 4 45 0 1925 128 18 4 chr2 11877353 11877634 -238810220 + AluSx SINE Alu 27 311 -1 259 294 87 22 chr2 11877767 11877859 -238809995 - L2 LINE L2 -188 3084 2987 280 298 170 18 chr2 11878517 11878688 -238809166 - MIR SINE MIR 0 262 66 245 334 114 64 chr2 11879346 11879705 -238808149 + L2 LINE L2 2887 3263 -9 288 0 0 0 chr2 11880070 11880102 -238807752 + (TG)n Simple_repeat Simple_repeat 2 33 0 2070 210 56 94 chr2 11880504 11881215 -238806639 + Charlie1a DNA MER1_type 1 684 -771 615 134 4 195 chr2 11881235 11881432 -238806422 - Charlie1 DNA MER1_type -375 2386 2238 1953 112 0 94 chr2 11881432 11881763 -238806091 - AluSx SINE Alu -12 300 1 615 134 4 195 chr2 11881763 11881796 -238806058 - Charlie1 DNA MER1_type -523 2238 2200 1350 202 30 16 chr2 11881796 11882168 -238805686 + Charlie1 DNA MER1_type 2385 2761 0 484 312 50 45 chr2 11882498 11882700 -238805154 + MIR3 SINE MIR 1 203 -5 376 325 234 0 chr2 11882805 11883002 -238804852 + MIR SINE MIR 10 252 -10 504 333 73 0 chr2 11883019 11883169 -238804685 + L2 LINE L2 3112 3272 0 217 273 76 0 chr2 11883788 11883854 -238804000 - MIR SINE MIR -87 175 105 470 282 20 20 chr2 11884211 11884360 -238803494 - L2 LINE L2 0 3313 3165 21 0 0 0 chr2 11884690 11884711 -238803143 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 11884890 11884914 -238802940 + AT_rich Low_complexity Low_complexity 1 24 0 400 326 61 11 chr2 11885049 11885230 -238802624 - L1ME4a LINE L1 -195 5926 5737 22 56 0 0 chr2 11885276 11885312 -238802542 + AT_rich Low_complexity Low_complexity 1 36 0 261 0 0 0 chr2 11885411 11885440 -238802414 + (A)n Simple_repeat Simple_repeat 1 29 0 365 298 132 29 chr2 11885852 11886057 -238801797 - MIR SINE MIR 0 262 37 475 330 30 51 chr2 11886376 11886612 -238801242 + MIR SINE MIR 5 235 -27 32 57 0 0 chr2 11887611 11887664 -238800190 + AT_rich Low_complexity Low_complexity 1 53 0 868 244 113 41 chr2 11888041 11888158 -238799696 + L1ME1 LINE L1 2201 2308 -3838 2145 123 27 0 chr2 11888158 11888458 -238799396 + AluSg SINE Alu 1 308 -2 868 244 113 41 chr2 11888458 11888781 -238799073 + L1ME1 LINE L1 2308 2692 -3454 1493 116 0 22 chr2 11888781 11889006 -238798848 - AluSg/x SINE Alu -8 304 85 868 244 113 41 chr2 11889006 11889122 -238798732 + L1ME1 LINE L1 2692 2798 -3348 1711 173 15 64 chr2 11889122 11889527 -238798327 - MLT1B LTR MaLR 0 390 6 2815 275 76 52 chr2 11889538 11889746 -238798108 + L1ME1 LINE L1 2801 3002 -3144 2817 13 0 0 chr2 11889746 11890057 -238797797 + AluY SINE Alu 1 311 0 2815 275 76 52 chr2 11890057 11892046 -238795808 + L1ME1 LINE L1 3002 5081 -1065 2770 102 0 0 chr2 11892046 11892410 -238795444 + THE1B LTR MaLR 1 364 0 2815 275 76 52 chr2 11892410 11892641 -238795213 + L1ME1 LINE L1 5081 5305 -841 1940 148 3 25 chr2 11892643 11892961 -238794893 + AluJb SINE Alu 1 311 -1 1075 261 106 9 chr2 11893017 11893165 -238794689 + L1ME1 LINE L1 5323 5455 -904 261 0 0 0 chr2 11893165 11893194 -238794660 + (CA)n Simple_repeat Simple_repeat 2 30 0 1075 261 106 9 chr2 11893194 11893470 -238794384 + L1ME1 LINE L1 5455 5788 -571 1118 236 60 3 chr2 11893470 11893771 -238794083 - MLT1D LTR MaLR -187 318 1 999 241 14 81 chr2 11893772 11893930 -238793924 + L1ME1 LINE L1 5782 5904 -262 2128 131 10 0 chr2 11893930 11894228 -238793626 - AluSp SINE Alu -12 301 1 999 241 14 81 chr2 11894228 11894426 -238793428 + L1ME1 LINE L1 5904 6114 -52 205 171 0 53 chr2 11894520 11894596 -238793258 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 741 128 13 20 chr2 11894618 11894767 -238793087 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 234 358 57 0 chr2 11895438 11895561 -238792293 - MIR SINE MIR -21 241 112 191 313 72 0 chr2 11895575 11895658 -238792196 + MIR SINE MIR 99 187 -75 2358 130 22 0 chr2 11895687 11896042 -238791812 - THE1B LTR MaLR 0 364 2 1534 179 58 0 chr2 11896633 11896924 -238790930 + AluJo SINE Alu 1 308 -4 448 196 11 0 chr2 11897068 11897160 -238790694 - FLAM_C SINE Alu -3 140 48 693 73 0 0 chr2 11897214 11897310 -238790544 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1663 160 0 60 chr2 11897320 11897638 -238790216 + AluJo SINE Alu 14 312 0 190 54 27 27 chr2 11897638 11897675 -238790179 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 573 199 18 6 chr2 11897699 11897865 -238789989 + GA-rich Low_complexity Low_complexity 2 169 0 2337 50 0 3 chr2 11897897 11898215 -238789639 + AluY SINE Alu 1 317 0 384 152 0 0 chr2 11898559 11898625 -238789229 + (TG)n Simple_repeat Simple_repeat 2 67 0 1298 213 21 15 chr2 11898680 11899009 -238788845 + L1MD3 LINE L1 7665 7995 0 251 272 87 10 chr2 11899161 11899264 -238788590 - L1ME LINE L1 -485 6134 6024 291 298 29 39 chr2 11899775 11899879 -238787975 + MIR SINE MIR 40 142 -120 1504 284 154 34 chr2 11900225 11901095 -238786759 - L1M4c LINE L1 -2735 3909 2847 1588 156 107 26 chr2 11901095 11901271 -238786583 + THE1C LTR MaLR 1 161 -214 531 56 0 0 chr2 11901271 11901342 -238786512 + (TC)n Simple_repeat Simple_repeat 1 71 0 1588 156 107 26 chr2 11901342 11901512 -238786342 + THE1C LTR MaLR 161 375 0 1504 284 154 34 chr2 11901512 11901864 -238785990 - L1M4c LINE L1 -3797 2847 2539 326 274 75 0 chr2 11901882 11901988 -238785866 - L1M4c LINE L1 -4163 2483 2370 2988 240 73 28 chr2 11902006 11902131 -238785723 - L1M4c LINE L1 -4432 2393 2275 2434 65 0 16 chr2 11902131 11902441 -238785413 + AluY SINE Alu 1 305 -6 2988 240 73 28 chr2 11902441 11903798 -238784056 - L1M4c LINE L1 -4550 2275 684 1097 246 41 52 chr2 11903799 11904161 -238783693 - L1M4c LINE L1 -5937 605 248 1267 230 4 25 chr2 11904169 11904447 -238783407 - AluJb SINE Alu -7 305 34 4940 206 29 39 chr2 11904454 11905492 -238782362 + L1MC3 LINE L1 5716 6763 -1022 2267 93 0 10 chr2 11905492 11905794 -238782060 - AluSc SINE Alu -10 299 1 4940 206 29 39 chr2 11905794 11905922 -238781932 + L1MC3 LINE L1 6763 6891 -894 351 0 0 0 chr2 11905922 11905961 -238781893 + (CA)n Simple_repeat Simple_repeat 2 40 0 4940 206 29 39 chr2 11905961 11906160 -238781694 + L1MC3 LINE L1 6891 7068 -717 238 315 140 0 chr2 11907543 11907686 -238780168 - MIR SINE MIR -6 256 94 639 7 107 0 chr2 11908399 11908539 -238779315 + (TA)n Simple_repeat Simple_repeat 1 155 0 196 100 20 20 chr2 11908541 11908591 -238779263 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 330 227 0 52 chr2 11908591 11908688 -238779166 + L1MC4 LINE L1 6612 6703 -1339 273 348 61 35 chr2 11908879 11909109 -238778745 - MIR SINE MIR -6 256 21 2284 77 3 29 chr2 11909868 11910179 -238777675 + AluY SINE Alu 9 311 0 1236 211 44 73 chr2 11910242 11910655 -238777199 - MLT2D LTR ERVL -13 401 1 210 71 0 0 chr2 11911300 11911328 -238776526 + (A)n Simple_repeat Simple_repeat 1 28 0 387 0 0 0 chr2 11911653 11911696 -238776158 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 11911971 11912001 -238775853 + (A)n Simple_repeat Simple_repeat 1 30 0 43 35 0 0 chr2 11913273 11913330 -238774524 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 11913384 11913405 -238774449 + AT_rich Low_complexity Low_complexity 1 21 0 211 244 0 39 chr2 11913417 11913495 -238774359 + (CATATA)n Simple_repeat Simple_repeat 5 79 0 244 374 30 0 chr2 11913599 11913698 -238774156 - L2 LINE L2 0 3272 3171 23 0 0 0 chr2 11914956 11914979 -238772875 + AT_rich Low_complexity Low_complexity 1 23 0 321 304 0 43 chr2 11915015 11915130 -238772724 - L2 LINE L2 -32 3281 3172 206 308 13 26 chr2 11915354 11915432 -238772422 - MER91A DNA MER1_type -111 85 9 302 376 38 11 chr2 11915513 11915699 -238772155 - L2 LINE L2 -281 3032 2842 182 325 38 0 chr2 11915902 11915982 -238771872 - MIR3 SINE MIR 0 208 126 218 284 0 26 chr2 11915990 11916106 -238771748 + (TA)n Simple_repeat Simple_repeat 2 114 0 3737 92 28 9 chr2 11916400 11916973 -238770881 - L1PB1 LINE L1 -158 5993 5410 910 140 0 0 chr2 11916975 11917125 -238770729 + L1PB1 LINE L1 6002 6151 0 1217 153 101 37 chr2 11917137 11917436 -238770418 - MLT1A1 LTR MaLR -39 357 9 2361 71 0 14 chr2 11917923 11918220 -238769634 - AluY SINE Alu -18 293 1 417 316 130 32 chr2 11918820 11919289 -238768565 + L1M3b LINE L1 629 1143 -5138 25 0 0 0 chr2 11919410 11919435 -238768419 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr2 11919764 11919804 -238768050 + AT_rich Low_complexity Low_complexity 1 40 0 2075 112 14 17 chr2 11921194 11921488 -238766366 - AluSx SINE Alu -19 293 1 183 281 195 0 chr2 11921513 11921595 -238766259 - L2 LINE L2 -36 3277 3180 336 267 92 112 chr2 11921889 11922095 -238765759 - MLT1I LTR MaLR -1 408 207 1338 202 7 109 chr2 11922358 11922769 -238765085 - MLT1A2 LTR MaLR 0 374 6 339 372 39 13 chr2 11925150 11925381 -238762473 + MIR SINE MIR 9 245 -17 292 333 35 26 chr2 11926025 11926139 -238761715 - MIR SINE MIR -147 115 1 209 409 0 11 chr2 11926332 11926425 -238761429 + MER5A DNA MER1_type 74 165 -24 330 290 0 11 chr2 11926647 11926740 -238761114 - L1MC4 LINE L1 -1337 6705 6614 216 0 0 0 chr2 11926742 11926766 -238761088 + (GA)n Simple_repeat Simple_repeat 2 25 0 253 294 80 74 chr2 11926892 11927218 -238760636 - L1MC4 LINE L1 -1906 5902 5575 327 49 0 0 chr2 11927420 11927461 -238760393 + (CA)n Simple_repeat Simple_repeat 2 42 0 260 331 22 29 chr2 11927462 11927601 -238760253 + (CATG)n Simple_repeat Simple_repeat 2 139 0 23 33 0 0 chr2 11927632 11927662 -238760192 + AT_rich Low_complexity Low_complexity 1 30 0 870 305 29 34 chr2 11927843 11928194 -238759660 + L1MC4a LINE L1 5592 5940 -1868 221 202 22 22 chr2 11928232 11928321 -238759533 + (TA)n Simple_repeat Simple_repeat 1 89 0 233 302 0 0 chr2 11929170 11929233 -238758621 + T-rich Low_complexity Low_complexity 3 65 0 309 233 33 67 chr2 11930636 11930756 -238757098 + L1ME4a LINE L1 5937 6052 -69 255 301 15 30 chr2 11931708 11931841 -238756013 + L1ME4a LINE L1 5310 5440 -681 566 282 173 27 chr2 11931957 11932443 -238755411 + L1ME4a LINE L1 5546 6102 -19 1698 174 10 13 chr2 11932444 11932754 -238755100 + AluJo SINE Alu 3 311 -1 386 284 43 26 chr2 11932946 11933062 -238754792 - MIR3 SINE MIR -86 122 5 2328 63 6 44 chr2 11933247 11933563 -238754291 + AluY SINE Alu 1 304 -7 519 236 10 28 chr2 11934024 11934313 -238753541 + CT-rich Low_complexity Low_complexity 1 283 0 222 323 32 43 chr2 11934395 11934488 -238753366 + MIR SINE MIR 21 112 -150 192 277 0 62 chr2 11934492 11934557 -238753297 - L2 LINE L2 0 3272 3212 1068 252 91 31 chr2 11934820 11935173 -238752681 + HsTC2 DNA Tc2 1 374 -1524 588 210 93 25 chr2 11935170 11935332 -238752522 + HsTC2 DNA Tc2 1277 1625 -273 * 236 323 177 0 chr2 11935382 11935512 -238752342 + MIR SINE MIR 37 189 -73 366 335 61 12 chr2 11936497 11936661 -238751193 + MIR SINE MIR 35 206 -56 211 329 51 29 chr2 11936809 11936946 -238750908 + MIR3 SINE MIR 3 142 -66 486 0 0 0 chr2 11938640 11938694 -238749160 + (CA)n Simple_repeat Simple_repeat 2 55 0 26 0 0 0 chr2 11938877 11938903 -238748951 + AT_rich Low_complexity Low_complexity 1 26 0 204 340 38 28 chr2 11939337 11939443 -238748411 + MIR SINE MIR 66 172 -90 3096 151 2 11 chr2 11940029 11940500 -238747354 + MLT1C LTR MaLR 1 467 0 4628 171 53 10 chr2 11940699 11941491 -238746363 - LTR1B LTR ERV1 0 826 1 551 273 40 42 chr2 11941756 11942031 -238745823 + L2 LINE L2 2956 3291 -22 3552 39 0 2 chr2 11942042 11942448 -238745406 + L1PA4 LINE L1 5746 6150 -5 2399 90 3 0 chr2 11942823 11943133 -238744721 + AluSp SINE Alu 1 311 -2 988 212 0 10 chr2 11943159 11943352 -238744502 - MER3 DNA MER1_type 0 209 19 341 254 60 103 chr2 11943952 11944137 -238743717 - MLT1J1 LTR MaLR -28 418 242 230 253 177 0 chr2 11944184 11944263 -238743591 - MLT1J1 LTR MaLR -285 161 69 1489 204 20 67 chr2 11944923 11945281 -238742573 - MER58B DNA MER1_type 0 341 1 342 278 61 37 chr2 11945864 11946069 -238741785 - HAL1b LINE L1 0 6121 5922 1831 117 3 60 chr2 11946069 11946369 -238741485 - AluSq SINE Alu -19 294 12 342 278 61 37 chr2 11946369 11946507 -238741347 - HAL1b LINE L1 -199 5922 1242 332 308 87 0 chr2 11946545 11946649 -238741205 - L2 LINE L2 -5 3308 3196 265 349 54 8 chr2 11946651 11946780 -238741074 - L2 LINE L2 -25 3247 3113 186 348 58 0 chr2 11947528 11947597 -238740257 - L3 LINE CR1 -677 900 828 269 214 0 0 chr2 11948685 11948741 -238739113 - MLT2B2 LTR ERVL 0 520 465 271 263 0 42 chr2 11948749 11948844 -238739010 + L1MC4 LINE L1 6614 6704 -1338 1698 195 20 26 chr2 11948862 11949294 -238738560 - MLT2B2 LTR ERVL -40 480 8 579 279 62 0 chr2 11949344 11949505 -238738349 - MIR SINE MIR -15 247 77 652 221 99 9 chr2 11949505 11949783 -238738071 + LTR50 LTR ERVL 1 344 -451 888 224 100 17 chr2 11949814 11950104 -238737750 + LTR50 LTR ERVL 482 795 0 929 203 0 0 chr2 11950246 11950404 -238737450 - AluJb SINE Alu -23 289 132 705 276 24 0 chr2 11950715 11950885 -238736969 - MIR3 SINE MIR -4 204 31 730 212 6 17 chr2 11951121 11951300 -238736554 - MER96B DNA MER1_type? -238 179 3 225 333 27 13 chr2 11951521 11951596 -238736258 + MIR SINE MIR 13 88 -174 207 237 175 21 chr2 11951707 11951804 -238736050 + MIR SINE MIR 110 221 -41 1709 176 17 10 chr2 11952219 11952521 -238735333 + AluJo SINE Alu 1 304 -8 1554 276 78 26 chr2 11952605 11953165 -238734689 + MLT1E LTR MaLR 1 591 -2 791 106 29 0 chr2 11953169 11953273 -238734581 + U6 snRNA snRNA 1 107 0 3370 80 17 4 chr2 11953273 11953758 -238734096 + L1PA8A LINE L1 5227 5716 -415 756 113 0 0 chr2 11953865 11953980 -238733874 - L1PA7 LINE L1 -108 6046 5932 * 1324 56 0 0 chr2 11953974 11954136 -238733718 + L1PA7 LINE L1 5669 5830 -324 27814 39 38 3 chr2 11954136 11957559 -238730295 + L1P LINE L1 5 3549 -2597 1965 262 74 48 chr2 11957679 11958385 -238729469 + HERV16 LTR ERVL 733 1456 -3540 1635 303 43 28 chr2 11958565 11959235 -238728619 + HERV16 LTR ERVL 2220 2899 -2097 610 291 106 0 chr2 11959241 11959440 -238728414 - MLT1D LTR MaLR 0 505 286 814 274 21 60 chr2 11959454 11959885 -238727969 + HERV16 LTR ERVL 3011 3468 -2296 1225 318 84 13 chr2 11961015 11961707 -238726147 + HAL1 LINE L1 1523 2263 -244 1569 228 21 12 chr2 11963871 11964204 -238723650 + MER58B DNA MER1_type 5 340 -1 622 239 61 0 chr2 11964234 11964414 -238723440 - L1MC4a LINE L1 -1498 6310 6120 1506 105 5 0 chr2 11964415 11964634 -238723220 - MER6 DNA MER2_type -27 838 619 1353 230 129 24 chr2 11964723 11965249 -238722605 - MLT1E1 LTR MaLR 0 654 1 2004 268 37 16 chr2 11965435 11965943 -238721911 + LTR40a LTR ERVL 1 519 0 2777 191 25 36 chr2 11966118 11966668 -238721186 + MER44D DNA MER2_type 7 605 0 234 0 0 0 chr2 11967379 11967405 -238720449 + (TG)n Simple_repeat Simple_repeat 1 26 0 211 366 32 0 chr2 11967622 11967715 -238720139 + MIR3 SINE MIR 105 200 -8 2659 120 8 5 chr2 11969612 11969986 -238717868 - THE1C LTR MaLR 0 375 1 562 299 51 0 chr2 11970264 11970401 -238717453 - MER45A DNA AcHobo -1 177 34 216 294 35 24 chr2 11971332 11971417 -238716437 - MIR SINE MIR -97 165 80 319 294 31 69 chr2 11973138 11973298 -238714556 - MIR SINE MIR -96 166 13 515 239 28 57 chr2 11973744 11973920 -238713934 - MER5B DNA MER1_type -2 176 6 203 62 62 0 chr2 11975790 11975822 -238712032 - MIR SINE MIR -105 157 124 2171 125 0 0 chr2 11975979 11976274 -238711580 + AluSg SINE Alu 1 295 -15 2143 170 10 47 chr2 11976537 11976942 -238710912 + MLT1B LTR MaLR 1 390 0 243 214 205 68 chr2 11977254 11977343 -238710511 + MIR SINE MIR 124 234 -28 8435 142 15 10 chr2 11977343 11978636 -238709218 + HSMAR2 DNA Mariner 3 1301 -1 243 214 205 68 chr2 11978636 11978663 -238709191 + MIR SINE MIR 234 256 -6 1953 177 106 32 chr2 11978736 11978928 -238708926 - MLT1C LTR MaLR 0 467 291 2486 176 54 77 chr2 11978928 11979554 -238708300 + LTR9 LTR ERV1 1 612 0 1953 177 106 32 chr2 11979554 11979796 -238708058 - MLT1C LTR MaLR -176 291 1 650 230 20 20 chr2 11979970 11980122 -238707732 + MER5B DNA MER1_type 27 178 0 185 159 23 0 chr2 11980680 11980724 -238707130 + CT-rich Low_complexity Low_complexity 1 45 0 413 293 47 60 chr2 11980968 11981118 -238706736 - MIR3 SINE MIR -41 167 20 366 214 88 159 chr2 11981485 11981667 -238706187 - MER5B DNA MER1_type 0 178 21 218 339 123 12 chr2 11981750 11982001 -238705853 - L2 LINE L2 -792 2522 2244 262 375 69 7 chr2 11983193 11983337 -238704517 + MIR SINE MIR 38 190 -72 22 56 0 0 chr2 11984559 11984595 -238703259 + AT_rich Low_complexity Low_complexity 1 36 0 217 321 47 38 chr2 11984701 11984807 -238703047 + MIR SINE MIR 25 131 -77 310 305 83 49 chr2 11984911 11985236 -238702618 + MARNA DNA Mariner 43 378 -208 186 394 51 15 chr2 11985337 11985474 -238702380 - MIR SINE MIR -4 258 117 4440 235 91 102 chr2 11986115 11987043 -238700811 + L1ME1 LINE L1 52 989 -5407 2205 65 4 4 chr2 11987043 11987322 -238700532 + AluY SINE Alu 1 279 -32 4440 235 91 102 chr2 11987322 11987362 -238700492 + L1ME1 LINE L1 989 1028 -5368 704 103 43 9 chr2 11987362 11987478 -238700376 + AluSg/x SINE Alu 182 301 -8 4440 235 91 102 chr2 11987478 11988891 -238698963 + L1ME1 LINE L1 1028 2520 -3876 2924 241 67 22 chr2 11988889 11990551 -238697303 + L1ME1 LINE L1 4492 6215 -20 * 274 305 58 94 chr2 11991479 11991787 -238696067 - L2 LINE L2 -9 3263 2967 216 97 0 0 chr2 11991789 11991820 -238696034 + (A)n Simple_repeat Simple_repeat 1 31 0 2698 202 6 14 chr2 11992076 11992566 -238695288 - MER66B LTR ERV1 0 486 1 198 354 40 0 chr2 11993350 11993449 -238694405 + MIR SINE MIR 148 250 -12 24 0 0 0 chr2 11993700 11993724 -238694130 + AT_rich Low_complexity Low_complexity 1 24 0 2373 124 33 33 chr2 11994030 11994394 -238693460 - THE1B LTR MaLR 0 364 1 255 321 0 12 chr2 11994901 11994985 -238692869 - MIR SINE MIR -133 129 47 21 0 0 0 chr2 11995053 11995074 -238692780 + AT_rich Low_complexity Low_complexity 1 21 0 629 266 77 65 chr2 11995405 11995799 -238692055 + MLT1H LTR MaLR 16 421 -128 268 328 22 39 chr2 11996203 11996337 -238691517 + MIR SINE MIR 22 152 -64 499 271 28 44 chr2 11996826 11997007 -238690847 + HsTC2 DNA Tc2 1 178 -1720 355 203 10 173 chr2 11997009 11997211 -238690643 + HsTC2 DNA Tc2 1732 1900 0 382 304 102 42 chr2 11997723 11998104 -238689750 + LTR33A LTR ERVL 53 456 -67 297 328 33 16 chr2 11998487 11998609 -238689245 - MIR SINE MIR -76 186 63 2194 94 12 44 chr2 11998680 11999000 -238688854 + AluSx SINE Alu 1 310 -2 289 314 58 0 chr2 11999155 11999276 -238688578 + L2 LINE L2 3186 3313 0 260 287 8 74 chr2 11999365 11999487 -238688367 - L2 LINE L2 0 3272 3159 299 82 55 0 chr2 11999963 12000036 -238687818 + (TA)n Simple_repeat Simple_repeat 1 77 0 51 0 0 0 chr2 12000036 12000087 -238687767 + AT_rich Low_complexity Low_complexity 1 51 0 360 293 0 0 chr2 12000365 12000440 -238687414 - MIR SINE MIR -64 144 70 390 269 123 38 chr2 12001428 12001640 -238686214 + MIR SINE MIR 20 249 -13 1075 124 0 31 chr2 12001911 12002072 -238685782 - MER4E LTR ERV1 0 766 611 * 2176 104 16 7 chr2 12002067 12002376 -238685478 - MER4E LTR ERV1 -466 313 2 214 183 169 42 chr2 12002399 12002470 -238685384 - MIR SINE MIR -136 126 47 360 0 0 0 chr2 12003400 12003440 -238684414 + (TG)n Simple_repeat Simple_repeat 2 41 0 351 257 26 10 chr2 12003489 12003608 -238684246 + MIR SINE MIR 28 149 -59 940 208 33 9 chr2 12003614 12003826 -238684028 + LTR8A LTR ERV1 1 217 -510 3632 62 0 7 chr2 12003826 12004277 -238683577 + LTR7 LTR ERV1 1 448 -2 20488 88 59 50 chr2 12004279 12007541 -238680313 + HERVH LTR ERV1 1 3290 -4423 3308 124 8 6 chr2 12007531 12008032 -238679822 + HERVH LTR ERV1 3492 3993 -3720 * 4242 153 3 1 chr2 12008034 12008695 -238679159 + HERVH LTR ERV1 4488 5149 -2564 1389 134 18 5 chr2 12008696 12008913 -238678941 + HERVH LTR ERV1 5600 5819 -1894 * 2696 58 45 13 chr2 12008911 12009291 -238678563 + HERVH LTR ERV1 7322 7713 0 3567 59 0 22 chr2 12009291 12009749 -238678105 + LTR7 LTR ERV1 1 448 -2 1800 178 100 57 chr2 12009759 12010249 -238677605 + LTR8A LTR ERV1 214 724 -3 4464 101 0 0 chr2 12010604 12011158 -238676696 - MER41A LTR ERV1 0 554 1 2278 95 10 0 chr2 12012705 12012999 -238674855 + AluSc SINE Alu 1 297 -12 207 277 114 72 chr2 12014832 12014998 -238672856 - MIR SINE MIR -71 191 19 1768 127 0 16 chr2 12015105 12015357 -238672497 - AluSx SINE Alu -16 296 49 312 337 95 12 chr2 12015429 12015598 -238672256 + MIR3 SINE MIR 22 204 -4 2039 114 0 36 chr2 12016013 12016321 -238671533 - AluSx SINE Alu -13 299 3 240 250 88 38 chr2 12016762 12016842 -238671012 - L2 LINE L2 -51 3262 3179 546 313 109 37 chr2 12016937 12017231 -238670623 - MLT1I LTR MaLR -13 396 82 294 251 64 22 chr2 12018005 12018121 -238669733 + MIR SINE MIR 29 153 -55 242 175 0 0 chr2 12018165 12018205 -238669649 - MLT2D LTR ERVL -8 389 350 207 294 0 0 chr2 12018205 12018256 -238669598 + (TATG)n Simple_repeat Simple_repeat 3 53 0 1632 198 24 45 chr2 12018273 12018647 -238669207 - MLT2D LTR ERVL -48 366 1 215 208 42 0 chr2 12018647 12018695 -238669159 + GA-rich Low_complexity Low_complexity 1 50 0 1825 143 0 0 chr2 12019664 12019930 -238667924 + AluSx SINE Alu 1 266 -46 2328 124 31 6 chr2 12021341 12021695 -238666159 - THE1B LTR MaLR 0 364 2 29 47 0 0 chr2 12023157 12023200 -238664654 + AT_rich Low_complexity Low_complexity 1 43 0 183 185 46 46 chr2 12023345 12023410 -238664444 + MIR3 SINE MIR 99 163 -45 2300 119 73 14 chr2 12023716 12024060 -238663794 - THE1B LTR MaLR 0 364 1 230 230 92 35 chr2 12024438 12024525 -238663329 - L2 LINE L2 -27 3245 3154 221 380 72 6 chr2 12025005 12025171 -238662683 + MIR SINE MIR 57 233 -29 305 329 80 0 chr2 12025999 12026136 -238661718 + L2 LINE L2 3109 3256 -16 181 260 20 20 chr2 12026158 12026208 -238661646 - L2 LINE L2 -14 3258 3209 543 317 28 36 chr2 12026717 12027080 -238660774 - LTR16B LTR ERVL 0 464 105 298 262 6 81 chr2 12027752 12027924 -238659930 + L2 LINE L2 3155 3313 0 279 309 81 0 chr2 12027928 12028064 -238659790 - MIR SINE MIR -79 183 37 279 284 0 0 chr2 12028213 12028294 -238659560 - MIR SINE MIR -70 192 112 335 245 65 19 chr2 12028349 12028504 -238659350 + L2 LINE L2 2942 3103 -210 2299 86 7 13 chr2 12028702 12029005 -238658849 - AluSg SINE Alu 0 310 10 363 347 47 0 chr2 12029146 12029316 -238658538 - L3b LINE CR1 -98 1485 1308 224 331 97 8 chr2 12029482 12029606 -238658248 + MIR SINE MIR 48 182 -80 1456 181 60 11 chr2 12029672 12029777 -238658077 + AluJo SINE Alu 11 109 -203 294 29 0 0 chr2 12029777 12029812 -238658042 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1456 181 60 11 chr2 12029812 12029988 -238657866 + AluJo SINE Alu 109 306 -6 242 188 153 24 chr2 12030607 12030692 -238657162 - MIR SINE MIR -67 141 46 * 475 273 70 32 chr2 12030689 12030876 -238656978 + MIR SINE MIR 69 262 0 250 274 150 26 chr2 12030884 12030997 -238656857 - MIR SINE MIR -62 146 20 1989 159 3 0 chr2 12031044 12031353 -238656501 + AluJb SINE Alu 3 312 0 210 310 0 14 chr2 12031487 12031558 -238656296 + MER5A DNA MER1_type 47 116 -73 24 67 0 0 chr2 12031854 12031899 -238655955 + AT_rich Low_complexity Low_complexity 1 45 0 274 240 52 21 chr2 12031901 12031997 -238655857 - Charlie7 DNA MER1_type -2511 101 3 2257 124 3 0 chr2 12032481 12032788 -238655066 + AluSx SINE Alu 1 308 -4 266 269 19 46 chr2 12033141 12033249 -238654605 + MIR SINE MIR 85 189 -73 365 339 75 54 chr2 12033507 12033796 -238654058 - L2 LINE L2 -5 3267 2966 2067 128 3 0 chr2 12033796 12034093 -238653761 + AluSg SINE Alu 1 298 -12 365 339 75 54 chr2 12034093 12034192 -238653662 - L2 LINE L2 -306 2966 2871 280 272 25 0 chr2 12034219 12034300 -238653554 - L2 LINE L2 -546 2768 2686 243 262 166 28 chr2 12034340 12034485 -238653369 - MER5B DNA MER1_type 0 178 14 656 234 28 41 chr2 12034689 12034907 -238652947 + MLT1C LTR MaLR 253 467 0 204 125 0 0 chr2 12035463 12035495 -238652359 + (GA)n Simple_repeat Simple_repeat 2 33 0 270 306 0 0 chr2 12035495 12035580 -238652274 + (TG)n Simple_repeat Simple_repeat 2 86 0 462 365 25 8 chr2 12035750 12035994 -238651860 + MIR SINE MIR 1 248 -14 272 289 105 59 chr2 12036805 12036957 -238650897 - MIR SINE MIR -70 192 34 395 338 40 22 chr2 12037171 12037396 -238650458 - L3 LINE CR1 -372 1205 977 207 0 0 0 chr2 12037549 12037572 -238650282 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1692 145 8 4 chr2 12037575 12037830 -238650024 - AluSx SINE Alu -31 281 26 273 244 33 11 chr2 12038354 12038444 -238649410 + MIR SINE MIR 37 128 -134 1120 229 190 44 chr2 12038699 12039135 -238648719 + MLT1D LTR MaLR 1 500 -5 283 311 10 0 chr2 12039169 12039253 -238648601 - MIR SINE MIR -78 130 42 194 382 29 15 chr2 12039647 12039783 -238648071 + MIR3 SINE MIR 45 182 -26 215 333 13 0 chr2 12040475 12040550 -238647304 - MIR SINE MIR -68 140 65 24 32 0 0 chr2 12040667 12040698 -238647156 + AT_rich Low_complexity Low_complexity 1 31 0 192 336 148 0 chr2 12041330 12041452 -238646402 - MIR3 SINE MIR -5 203 64 1947 139 37 6 chr2 12043527 12043879 -238643975 - L1MD1 LINE L1 0 6242 5880 242 269 19 10 chr2 12043880 12043984 -238643870 - L1M4 LINE L1 -1778 4368 4264 980 199 26 26 chr2 12044031 12044262 -238643592 - L1M4 LINE L1 -1888 4258 4028 188 352 46 19 chr2 12044603 12044711 -238643143 - MIR SINE MIR -71 191 81 191 340 130 0 chr2 12044905 12045005 -238642849 + L2 LINE L2 3158 3270 -2 284 320 78 24 chr2 12045146 12045366 -238642488 + MIR SINE MIR 19 248 -14 1708 171 7 21 chr2 12045376 12045663 -238642191 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr2 12046949 12046970 -238640884 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 12046981 12047002 -238640852 + AT_rich Low_complexity Low_complexity 1 21 0 357 219 61 0 chr2 12048017 12048099 -238639755 - MER94 DNA DNA -47 87 1 228 157 39 0 chr2 12048629 12048680 -238639174 - MER5A DNA MER1_type -64 125 73 256 208 66 66 chr2 12049196 12049302 -238638552 - MIR SINE MIR -46 216 111 417 95 0 0 chr2 12049628 12049691 -238638163 + (TG)n Simple_repeat Simple_repeat 1 63 0 414 0 0 0 chr2 12049701 12049747 -238638107 + (TA)n Simple_repeat Simple_repeat 1 46 0 180 0 0 0 chr2 12049945 12049965 -238637889 + (GA)n Simple_repeat Simple_repeat 1 20 0 212 288 225 9 chr2 12051502 12051613 -238636241 + MIR SINE MIR 47 181 -81 538 279 42 42 chr2 12052247 12052484 -238635370 + MIR SINE MIR 13 249 -13 739 253 81 33 chr2 12053742 12054015 -238633839 + L2 LINE L2 3027 3312 -1 459 194 0 0 chr2 12054019 12054122 -238633732 + GA-rich Low_complexity Low_complexity 2 104 0 509 251 34 40 chr2 12054405 12054580 -238633274 - MIR SINE MIR -10 252 79 202 330 73 9 chr2 12054631 12054740 -238633114 + MIR SINE MIR 37 152 -56 237 240 188 0 chr2 12055143 12055247 -238632607 + L2 LINE L2 2921 3059 -254 261 349 8 47 chr2 12055339 12055468 -238632386 + L2 LINE L2 3134 3257 -15 197 191 24 0 chr2 12056623 12056665 -238631189 - L2 LINE L2 -14 3258 3216 225 278 89 0 chr2 12056765 12056855 -238630999 + L2 LINE L2 2968 3065 -207 322 369 0 0 chr2 12056962 12057065 -238630789 + L2 LINE L2 3133 3235 -37 238 318 42 48 chr2 12057080 12057269 -238630585 - MLT1J2 LTR MaLR 0 450 263 2306 113 48 22 chr2 12057614 12057969 -238629885 - THE1B LTR MaLR 0 364 1 2329 90 20 0 chr2 12058723 12059022 -238628832 - AluSc SINE Alu -3 306 2 455 299 28 49 chr2 12059141 12059425 -238628429 - L2 LINE L2 -443 2871 2594 215 253 0 11 chr2 12059974 12060065 -238627789 + GA-rich Low_complexity Low_complexity 4 93 0 256 242 67 107 chr2 12060229 12060407 -238627447 + LTR33A LTR ERVL 25 195 -328 459 259 36 7 chr2 12060492 12060631 -238627223 + LTR33A LTR ERVL 365 507 -16 195 300 48 88 chr2 12061673 12061900 -238625954 + L2 LINE L2 2967 3184 -88 191 35 0 35 chr2 12062169 12062198 -238625656 + (TCC)n Simple_repeat Simple_repeat 3 30 0 258 296 53 38 chr2 12062470 12062602 -238625252 + MIR SINE MIR 65 198 -64 2160 182 26 19 chr2 12062671 12063089 -238624765 + MLT1C LTR MaLR 21 441 -26 315 247 37 25 chr2 12063368 12063449 -238624405 - MER5B DNA MER1_type -79 99 18 201 93 56 56 chr2 12063883 12063937 -238623917 + A-rich Low_complexity Low_complexity 4 57 0 180 295 0 13 chr2 12064080 12064158 -238623696 + L2 LINE L2 2884 2960 -353 2258 89 89 0 chr2 12065174 12065498 -238622356 - MER4C LTR ERV1 -5 460 108 467 298 57 24 chr2 12066541 12066789 -238621065 + MIR SINE MIR 2 257 -5 4331 162 47 10 chr2 12067328 12068755 -238619099 + L1MA6 LINE L1 4640 6120 -180 399 226 220 21 chr2 12068812 12068998 -238618856 + MIR SINE MIR 24 246 -16 1008 237 86 4 chr2 12069439 12069696 -238618158 - MLT1C LTR MaLR 0 467 190 1107 158 11 0 chr2 12069696 12069880 -238617974 - MLT1-int LTR MaLR -1185 186 1 1586 154 30 129 chr2 12069880 12069920 -238617934 - MLT2C1 LTR ERVL 0 397 355 351 0 0 0 chr2 12069920 12069959 -238617895 + (TG)n Simple_repeat Simple_repeat 1 39 0 1586 154 30 129 chr2 12069959 12070119 -238617735 - MLT2C1 LTR ERVL -42 355 181 2410 78 0 3 chr2 12070119 12070426 -238617428 - AluY SINE Alu -5 306 1 1586 154 30 129 chr2 12070426 12070665 -238617189 - MLT2C1 LTR ERVL -216 181 1 201 281 61 49 chr2 12070746 12070828 -238617026 + MIR3 SINE MIR 125 207 -1 369 306 122 6 chr2 12071504 12071684 -238616170 + MIR SINE MIR 7 207 -55 425 243 103 76 chr2 12071781 12072057 -238615797 + MLT1H LTR MaLR 1 314 -235 243 295 51 0 chr2 12072117 12072195 -238615659 + MLT1H LTR MaLR 454 535 -14 288 0 0 0 chr2 12073706 12073738 -238614116 + (TG)n Simple_repeat Simple_repeat 2 33 0 342 228 80 68 chr2 12073932 12074094 -238613760 - MER114 LTR ERV -27 621 458 657 250 60 5 chr2 12074107 12074323 -238613531 - MER114 LTR ERV -420 228 1 387 350 93 9 chr2 12075958 12076184 -238611670 - MIR SINE MIR -16 246 2 208 261 0 0 chr2 12076718 12076764 -238611090 - L2 LINE L2 -5 3267 3222 283 145 0 53 chr2 12076871 12076947 -238610907 + (GGAGAA)n Simple_repeat Simple_repeat 5 76 0 218 179 18 0 chr2 12077219 12077275 -238610579 + (TGAA)n Simple_repeat Simple_repeat 1 57 0 397 263 104 45 chr2 12077549 12077770 -238610084 - MLT1L LTR MaLR -206 409 73 281 308 188 0 chr2 12078215 12078348 -238609506 - MIR SINE MIR -19 243 86 186 359 58 29 chr2 12078829 12078932 -238608922 - L2 LINE L2 -8 3264 3159 729 273 95 71 chr2 12079027 12079533 -238608321 + LTR33 LTR ERVL 1 518 -3 296 257 155 20 chr2 12079534 12079682 -238608172 - MIR3 SINE MIR -15 193 26 180 259 111 0 chr2 12080671 12080725 -238607129 + MIR SINE MIR 88 147 -61 761 306 52 33 chr2 12081304 12081804 -238606050 - MLT1H1 LTR MaLR -13 536 1 281 254 0 0 chr2 12081952 12082007 -238605847 + L2 LINE L2 3236 3290 -23 281 318 23 0 chr2 12082399 12082487 -238605367 - L2 LINE L2 0 3272 3183 1518 207 83 115 chr2 12082747 12083181 -238604673 + MLT1E LTR MaLR 148 593 0 217 292 124 68 chr2 12083392 12083553 -238604301 + L2 LINE L2 2866 3035 -237 261 128 0 0 chr2 12083597 12083644 -238604210 + (TA)n Simple_repeat Simple_repeat 1 47 0 338 260 70 10 chr2 12083644 12083744 -238604110 - L1MC4 LINE L1 -1323 6719 6614 * 398 194 0 82 chr2 12083669 12083767 -238604087 + L1MC4 LINE L1 6614 6703 -1339 345 198 27 90 chr2 12083774 12083867 -238603987 + L1MC4 LINE L1 6613 6699 -1343 471 113 0 0 chr2 12083867 12083938 -238603916 + (CA)n Simple_repeat Simple_repeat 2 72 0 345 198 27 90 chr2 12083938 12083955 -238603899 + L1MC4 LINE L1 6699 6716 -1326 1454 198 52 38 chr2 12084173 12084541 -238603313 + MLT1B LTR MaLR 1 373 -17 1333 133 90 0 chr2 12084630 12084841 -238603013 + MER30 DNA MER1_type 1 230 0 210 316 61 44 chr2 12084896 12085010 -238602844 + MIR SINE MIR 97 212 -50 880 220 24 24 chr2 12085080 12085330 -238602524 - MER96B DNA MER1_type? -167 250 1 235 220 34 0 chr2 12085884 12085926 -238601928 + GA-rich Low_complexity Low_complexity 4 50 -14 1972 201 49 82 chr2 12085926 12086498 -238601356 - MLT2B3 LTR ERVL -1 553 1 235 220 34 0 chr2 12086498 12086514 -238601340 + GA-rich Low_complexity Low_complexity 50 64 0 454 308 63 0 chr2 12086590 12086749 -238601105 - MIR SINE MIR -49 213 45 250 310 70 51 chr2 12087495 12087653 -238600201 + MIR SINE MIR 76 236 -26 231 305 78 35 chr2 12087857 12087998 -238599856 - MIR SINE MIR -95 167 21 206 216 0 0 chr2 12088429 12088466 -238599388 + (CAAG)n Simple_repeat Simple_repeat 2 38 0 534 172 0 0 chr2 12088959 12089058 -238598796 + (CA)n Simple_repeat Simple_repeat 2 100 0 312 231 130 19 chr2 12089069 12089177 -238598677 + MIR SINE MIR 69 188 -74 2027 163 28 0 chr2 12090139 12090494 -238597360 + MLT1A1 LTR MaLR 1 365 0 210 260 135 31 chr2 12090496 12090592 -238597262 - MER91C DNA MER1_type -30 110 5 224 306 16 0 chr2 12090774 12090836 -238597018 + L2 LINE L2 3209 3271 -1 2212 96 0 0 chr2 12091188 12091480 -238596374 - AluSc SINE Alu -17 292 1 274 398 128 0 chr2 12091480 12091691 -238596163 - MIR SINE MIR -18 244 7 317 253 121 0 chr2 12092274 12092365 -238595489 + L2 LINE L2 3200 3301 -12 408 313 53 65 chr2 12092385 12092631 -238595223 + L2 LINE L2 3022 3264 -8 280 296 25 75 chr2 12092636 12092803 -238595051 - MIR SINE MIR -60 148 32 257 167 49 108 chr2 12093141 12093243 -238594611 - MER94 DNA DNA -25 109 14 23 0 0 0 chr2 12094140 12094163 -238593691 + GC_rich Low_complexity Low_complexity 1 23 0 252 143 13 78 chr2 12094318 12094395 -238593459 + G-rich Low_complexity Low_complexity 2 73 0 306 346 31 8 chr2 12099512 12099639 -238588215 - MIR3 SINE MIR -49 159 30 335 271 122 0 chr2 12100138 12100245 -238587609 + MIR3 SINE MIR 40 159 -49 470 292 49 7 chr2 12100473 12100617 -238587237 - MIR SINE MIR -50 212 63 328 268 85 37 chr2 12101616 12101780 -238586074 - L2 LINE L2 -208 3064 2893 181 344 42 21 chr2 12103401 12103497 -238584357 - MIR3 SINE MIR -34 174 77 383 313 112 1 chr2 12104598 12104742 -238583112 + MIR SINE MIR 46 197 -65 504 259 127 25 chr2 12105556 12105753 -238582101 + MIR SINE MIR 34 250 -12 215 320 27 13 chr2 12107377 12107452 -238580402 + MIR SINE MIR 187 262 0 575 254 46 8 chr2 12107510 12107640 -238580214 - L2 LINE L2 -2 3311 3177 471 269 174 6 chr2 12107704 12107871 -238579983 - MIR SINE MIR -62 200 6 181 0 33 33 chr2 12108087 12108117 -238579737 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 342 250 90 10 chr2 12108487 12108587 -238579267 - L2 LINE L2 -2 3311 3204 231 349 132 9 chr2 12109053 12109159 -238578695 - MIR3 SINE MIR -52 156 38 536 253 8 20 chr2 12110606 12110760 -238577094 + MIR SINE MIR 22 150 -58 251 294 88 67 chr2 12110919 12111157 -238576697 + MIR SINE MIR 20 262 0 232 297 33 22 chr2 12111211 12111302 -238576552 - MIR3 SINE MIR -6 202 111 207 296 20 10 chr2 12111848 12111946 -238575908 - L2 LINE L2 -297 3016 2918 232 360 9 26 chr2 12112140 12112254 -238575600 + L2 LINE L2 3154 3265 -7 196 273 47 47 chr2 12112473 12112601 -238575253 - MIR SINE MIR -61 147 20 216 321 56 37 chr2 12112991 12113153 -238574701 + MIR SINE MIR 69 233 -29 240 328 0 0 chr2 12114147 12114205 -238573649 - L2 LINE L2 -23 3290 3233 359 299 19 116 chr2 12115191 12115246 -238572608 - MIR3 SINE MIR -2 206 147 551 124 21 10 chr2 12115246 12115343 -238572511 + L1MB3 LINE L1 6076 6173 -10 359 299 19 116 chr2 12115343 12115494 -238572360 - MIR3 SINE MIR -61 147 20 1875 124 53 0 chr2 12116752 12117034 -238570820 - AluSg SINE Alu -13 297 1 428 283 72 33 chr2 12117150 12117330 -238570524 + MIR SINE MIR 4 190 -72 207 247 148 62 chr2 12117428 12117509 -238570345 + MIR SINE MIR 46 133 -129 400 245 35 84 chr2 12117553 12117696 -238570158 + L2 LINE L2 3134 3269 -3 296 294 96 40 chr2 12120414 12120591 -238567263 - MIR SINE MIR -69 193 7 188 302 65 99 chr2 12120929 12121161 -238566693 - L2 LINE L2 -125 3147 2924 236 211 19 19 chr2 12121357 12121409 -238566445 + L2 LINE L2 3209 3260 -12 1928 202 19 22 chr2 12122260 12122626 -238565228 + MLT1A1 LTR MaLR 1 365 0 310 341 66 0 chr2 12123240 12123391 -238564463 - MIR SINE MIR -68 140 34 1649 210 16 25 chr2 12123697 12124063 -238563791 - MLT1A1 LTR MaLR -2 363 1 474 264 16 24 chr2 12124080 12124205 -238563649 + MIR SINE MIR 19 142 -66 324 146 36 0 chr2 12124754 12124809 -238563045 + MLT1C LTR MaLR 1 57 -410 846 129 14 7 chr2 12124809 12124948 -238562906 - MLT1A1 LTR MaLR -225 140 1 251 329 13 13 chr2 12124965 12125041 -238562813 + MIR SINE MIR 19 94 -114 1497 218 62 14 chr2 12125047 12125401 -238562453 + MLT1C LTR MaLR 66 436 -31 327 270 30 10 chr2 12126146 12126246 -238561608 - L1MA10 LINE L1 -7 6327 6226 * 563 284 84 8 chr2 12126239 12126396 -238561458 - L1M4 LINE L1 -1818 4397 4214 189 0 0 0 chr2 12126396 12126417 -238561437 + (TTA)n Simple_repeat Simple_repeat 2 22 0 563 284 84 8 chr2 12126417 12126498 -238561356 - L1M4 LINE L1 -2001 4214 4141 * 2371 233 56 26 chr2 12126482 12127413 -238560441 - L1MEc LINE L1 -3540 2675 1765 3056 305 44 26 chr2 12127519 12128701 -238559153 - ERVL LTR ERVL -2129 2867 1665 755 313 39 58 chr2 12128708 12129171 -238558683 - ERVL LTR ERVL -3520 1476 1023 1451 224 52 75 chr2 12129180 12129685 -238558169 - MLT1D LTR MaLR 0 505 13 1999 148 42 36 chr2 12129869 12130226 -238557628 + MER47A DNA MER2_type 1 359 -7 482 309 18 6 chr2 12130265 12130430 -238557424 - ERVL LTR ERVL -3720 2044 1878 342 68 0 0 chr2 12130553 12130597 -238557257 - MADE1 DNA Mariner 0 80 37 398 333 69 32 chr2 12130605 12130851 -238557003 - ERVL LTR ERVL -4327 669 415 1215 209 146 16 chr2 12130860 12131175 -238556679 + MLT1A1 LTR MaLR 10 365 0 699 316 45 11 chr2 12131274 12131540 -238556314 - ERVL LTR ERVL -4711 285 11 255 277 12 24 chr2 12132770 12132853 -238555001 - MIR3 SINE MIR -27 181 100 218 232 49 37 chr2 12132915 12132997 -238554857 + L2 LINE L2 3189 3271 -1 211 355 69 28 chr2 12134035 12134193 -238553661 + MIR3 SINE MIR 3 164 -66 201 143 0 29 chr2 12134814 12134849 -238553005 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 281 359 114 40 chr2 12134870 12135221 -238552633 - L2 LINE L2 -3 3269 2893 1784 160 21 30 chr2 12136008 12136345 -238551509 + MLT1A1 LTR MaLR 32 365 0 437 311 15 7 chr2 12136347 12136482 -238551372 + MIR SINE MIR 16 151 -111 531 257 66 7 chr2 12137070 12137222 -238550632 - MIR3 SINE MIR -12 196 36 306 289 11 67 chr2 12137452 12137542 -238550312 - L2 LINE L2 -42 3230 3146 517 315 65 53 chr2 12137798 12138119 -238549735 - MLT1K LTR MaLR -126 462 138 242 371 13 38 chr2 12139104 12139263 -238548591 + MIR3 SINE MIR 33 187 -21 222 279 82 40 chr2 12139903 12140079 -238547775 - MIR SINE MIR -66 142 11 303 192 0 0 chr2 12140964 12141016 -238546838 + MER53 DNA DNA 1 52 -137 284 364 8 8 chr2 12141106 12141224 -238546630 - MIR SINE MIR -125 137 20 390 195 54 81 chr2 12141346 12141495 -238546359 + MER104 DNA Tc2 1 145 -35 416 261 30 3 chr2 12142569 12142701 -238545153 - MIR SINE MIR -63 145 20 467 250 75 33 chr2 12143101 12143262 -238544592 + MIR SINE MIR 5 173 -63 182 320 111 107 chr2 12143239 12143464 -238544390 + L2 LINE L2 3023 3248 -24 * 362 288 38 11 chr2 12143802 12143944 -238543910 - MIR SINE MIR -64 144 18 328 254 73 34 chr2 12144675 12144830 -238543024 - MIR SINE MIR -42 220 59 238 285 35 36 chr2 12144851 12144960 -238542894 - MIR SINE MIR -102 106 3 201 169 15 62 chr2 12145183 12145248 -238542606 + CT-rich Low_complexity Low_complexity 3 64 0 357 287 105 0 chr2 12145668 12145811 -238542043 + MIR3 SINE MIR 24 181 -27 322 337 21 0 chr2 12146707 12146802 -238541052 + L3 LINE CR1 1467 1563 -14 233 119 24 0 chr2 12146892 12146934 -238540920 + CT-rich Low_complexity Low_complexity 2 44 0 421 199 7 40 chr2 12147007 12147158 -238540696 + GA-rich Low_complexity Low_complexity 2 147 0 267 268 14 0 chr2 12147186 12147257 -238540597 + GA-rich Low_complexity Low_complexity 3 74 0 231 313 0 50 chr2 12148800 12148880 -238538974 + MIR3 SINE MIR 15 90 -118 211 266 78 16 chr2 12148897 12148961 -238538893 - MIR SINE MIR -90 172 105 505 321 96 44 chr2 12149228 12149487 -238538367 - L2 LINE L2 -17 3296 3052 1872 121 92 0 chr2 12149487 12149759 -238538095 + AluSx SINE Alu 1 297 -15 505 321 96 44 chr2 12149759 12150099 -238537755 - L2 LINE L2 -261 3052 2643 2036 131 0 0 chr2 12150099 12150414 -238537440 + AluSx SINE Alu 1 315 0 505 321 96 44 chr2 12150414 12150498 -238537356 - L2 LINE L2 -670 2643 2565 1629 138 4 11 chr2 12150606 12150874 -238536980 + L1MA4 LINE L1 6035 6300 0 418 303 114 0 chr2 12152547 12152722 -238535132 + MIR SINE MIR 53 247 -15 368 292 41 18 chr2 12153416 12153590 -238534264 + MIR SINE MIR 2 174 -63 473 264 63 29 chr2 12154278 12154452 -238533402 + MER5A DNA MER1_type 7 186 -3 2115 146 50 19 chr2 12154911 12155275 -238532579 + THE1C LTR MaLR 1 375 0 23 33 0 0 chr2 12155531 12155561 -238532293 + AT_rich Low_complexity Low_complexity 1 30 0 415 265 118 12 chr2 12156506 12156676 -238531178 - MIR SINE MIR -56 206 19 866 281 121 25 chr2 12156695 12157143 -238530711 - MLT1H LTR MaLR -19 530 40 21 0 0 0 chr2 12157343 12157364 -238530490 + AT_rich Low_complexity Low_complexity 1 21 0 404 305 116 56 chr2 12157408 12157939 -238529915 + L2 LINE L2 2684 3271 -1 1058 97 0 0 chr2 12157966 12158110 -238529744 - L1PA4 LINE L1 -2 6153 6010 971 65 29 1 chr2 12158110 12158256 -238529598 + L1PA4 LINE L1 5923 6079 -86 203 295 42 32 chr2 12158602 12158697 -238529157 - L2 LINE L2 -2691 623 528 362 279 11 49 chr2 12158744 12158990 -238528864 + (TATATG)n Simple_repeat Simple_repeat 1 236 0 205 312 43 0 chr2 12159037 12159130 -238528724 + (TATATG)n Simple_repeat Simple_repeat 5 101 0 304 325 44 12 chr2 12159435 12159595 -238528259 + MIR3 SINE MIR 32 196 -12 236 269 138 39 chr2 12159909 12160039 -238527815 + MIR SINE MIR 50 192 -70 1689 216 74 9 chr2 12160498 12160960 -238526894 + Charlie4a DNA MER1_type 17 508 0 401 264 214 16 chr2 12161265 12161447 -238526407 - MIR SINE MIR -2 260 43 30 0 0 0 chr2 12162232 12162262 -238525592 + AT_rich Low_complexity Low_complexity 1 30 0 2372 127 33 25 chr2 12162340 12162701 -238525153 - THE1B LTR MaLR 0 364 1 11272 104 6 36 chr2 12162701 12164329 -238523525 - THE1B-int LTR MaLR 0 1580 2 2101 147 42 31 chr2 12164330 12164690 -238523164 - THE1B LTR MaLR 0 364 1 432 312 26 13 chr2 12164912 12165066 -238522788 - MIR SINE MIR -71 191 36 447 308 69 20 chr2 12165732 12165952 -238521902 + MIR SINE MIR 15 242 -20 203 329 25 0 chr2 12166210 12166289 -238521565 - L2 LINE L2 -7 3265 3185 550 320 90 46 chr2 12166861 12166954 -238520900 - HAL1b LINE L1 -631 717 630 7860 32 0 4 chr2 12166954 12167930 -238519924 - L1PA4 LINE L1 -2 6153 5176 550 320 90 46 chr2 12167930 12168270 -238519584 - HAL1b LINE L1 -718 630 265 21 36 0 0 chr2 12168823 12168851 -238519003 + AT_rich Low_complexity Low_complexity 1 28 0 577 347 98 33 chr2 12168899 12170070 -238517784 + L1M4 LINE L1 4151 5403 -743 399 113 12 88 chr2 12170149 12170229 -238517625 + MER58B DNA MER1_type 259 332 -9 6967 52 16 2 chr2 12170239 12171340 -238516514 + L1PA7 LINE L1 5036 6148 -6 2132 117 0 3 chr2 12171506 12171806 -238516048 - AluSg SINE Alu -11 299 1 22 35 0 0 chr2 12171821 12171850 -238516004 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 12171918 12171939 -238515915 + AT_rich Low_complexity Low_complexity 1 21 0 2138 117 0 13 chr2 12172328 12172627 -238515227 - AluSx SINE Alu -17 295 1 1833 139 0 24 chr2 12173106 12173401 -238514453 + AluSg SINE Alu 17 304 -6 251 313 114 15 chr2 12173619 12173750 -238514104 + L2 LINE L2 3168 3311 -2 352 290 178 0 chr2 12173851 12174020 -238513834 + MIR SINE MIR 56 254 -8 538 333 21 12 chr2 12174981 12175221 -238512633 - MIR SINE MIR -13 249 8 213 231 0 31 chr2 12176543 12176608 -238511246 + GA-rich Low_complexity Low_complexity 4 66 0 460 284 129 19 chr2 12177084 12177140 -238510714 - MER5A DNA MER1_type -14 175 127 5225 132 34 2 chr2 12177140 12177517 -238510337 + L1PA13 LINE L1 4313 4677 -1486 336 18 53 18 chr2 12177517 12177574 -238510280 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5225 132 34 2 chr2 12177574 12178556 -238509298 + L1PA13 LINE L1 4677 5723 -440 306 0 0 0 chr2 12178556 12178590 -238509264 + (CA)n Simple_repeat Simple_repeat 2 35 0 5225 132 34 2 chr2 12178590 12179042 -238508812 + L1PA13 LINE L1 5723 6159 -4 460 284 129 19 chr2 12179042 12179140 -238508714 - MER5A DNA MER1_type -62 127 4 2934 138 6 26 chr2 12179252 12179751 -238508103 + LOR1a LTR ERV1 1 489 -8 283 369 103 34 chr2 12180228 12180461 -238507393 - L2 LINE L2 -208 3064 2816 203 170 0 19 chr2 12180857 12180910 -238506944 + (TA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr2 12181079 12181100 -238506754 + AT_rich Low_complexity Low_complexity 1 21 0 2233 83 24 3 chr2 12183164 12183454 -238504400 + AluY SINE Alu 1 296 -15 432 357 40 12 chr2 12183469 12183721 -238504133 + L3 LINE CR1 1301 1559 -18 183 297 66 66 chr2 12184306 12184397 -238503457 + MIR SINE MIR 57 147 -115 266 278 52 43 chr2 12184737 12184852 -238503002 + MIR3 SINE MIR 81 196 -12 219 329 26 0 chr2 12185542 12185618 -238502236 + MIR SINE MIR 63 140 -122 250 397 45 13 chr2 12186488 12186712 -238501142 + MIR SINE MIR 21 251 -11 192 179 0 0 chr2 12186722 12186761 -238501093 + (TTA)n Simple_repeat Simple_repeat 3 41 0 247 313 0 0 chr2 12187458 12187541 -238500313 + GA-rich Low_complexity Low_complexity 2 84 0 3417 217 54 10 chr2 12188654 12189545 -238498309 + MER63C DNA MER1_type 1 930 0 397 157 29 0 chr2 12189634 12189704 -238498150 - MER7A DNA MER2_type -25 311 240 2031 219 68 39 chr2 12189747 12190447 -238497407 + L1ME1 LINE L1 5176 5889 -277 6020 125 91 13 chr2 12190457 12191598 -238496256 + Tigger3b DNA MER2_type 2 1231 0 534 202 0 26 chr2 12191606 12191720 -238496134 - MER7A DNA MER2_type -237 109 1 278 200 14 0 chr2 12191720 12191790 -238496064 + L1ME2 LINE L1 5908 5978 -186 2591 67 0 0 chr2 12191790 12192102 -238495752 + AluSq SINE Alu 1 312 -1 2221 84 3 24 chr2 12192149 12192466 -238495388 - AluSp SINE Alu 0 313 6 228 313 23 69 chr2 12193176 12193339 -238494515 + MIR SINE MIR 23 174 -63 22 0 0 0 chr2 12194239 12194261 -238493593 + AT_rich Low_complexity Low_complexity 1 22 0 1605 237 29 26 chr2 12194698 12195150 -238492704 + MLT1C LTR MaLR 2 454 -13 439 171 19 0 chr2 12195851 12195956 -238491898 + CT-rich Low_complexity Low_complexity 2 108 0 480 297 33 2 chr2 12196226 12196404 -238491450 - MIR SINE MIR -65 197 16 243 0 0 0 chr2 12196983 12197010 -238490844 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 442 275 94 52 chr2 12197994 12198227 -238489627 - MIR SINE MIR 0 262 20 237 167 0 37 chr2 12198962 12199016 -238488838 + CT-rich Low_complexity Low_complexity 3 54 0 195 373 0 0 chr2 12199086 12199158 -238488696 - MIR SINE MIR -66 142 71 3078 164 43 11 chr2 12200267 12200862 -238486992 - MER6A DNA MER2_type -13 592 -11 291 256 134 43 chr2 12201397 12201561 -238486293 + MIR3 SINE MIR 3 181 -27 210 86 0 103 chr2 12203068 12203126 -238484728 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 445 287 153 0 chr2 12204002 12204159 -238483695 - MER5A DNA MER1_type -5 184 4 255 376 30 51 chr2 12204161 12204358 -238483496 + MIR3 SINE MIR 16 208 0 2181 170 17 10 chr2 12204527 12204945 -238482909 + L1M2 LINE L1 5344 5764 -527 3715 115 89 74 chr2 12204946 12205719 -238482135 - LTR1 LTR ERV1 0 785 1 2533 43 0 7 chr2 12205790 12206095 -238481759 + AluY SINE Alu 1 303 -8 236 292 112 11 chr2 12206746 12206835 -238481019 + L2 LINE L2 3170 3267 -5 206 326 76 21 chr2 12207981 12208125 -238479729 - MIR SINE MIR -77 185 34 285 349 70 6 chr2 12208750 12208922 -238478932 + MIR SINE MIR 80 262 0 204 319 250 17 chr2 12209135 12209251 -238478603 + L2 LINE L2 3123 3265 -7 * 213 296 286 10 chr2 12209248 12209346 -238478508 + L2 LINE L2 3128 3252 -20 241 316 0 0 chr2 12209439 12209496 -238478358 + MIR SINE MIR 28 84 -124 599 316 123 30 chr2 12209669 12210074 -238477780 + L2 LINE L2 2871 3313 0 258 317 0 0 chr2 12210593 12210653 -238477201 + MIR3 SINE MIR 125 184 -24 353 306 73 48 chr2 12211104 12211310 -238476544 + MIR SINE MIR 20 230 -32 870 190 31 20 chr2 12212418 12212541 -238475313 + MER3 DNA MER1_type 9 136 -73 2037 118 10 0 chr2 12212541 12212830 -238475024 - AluSx SINE Alu -20 292 1 870 190 31 20 chr2 12212830 12212901 -238474953 + MER3 DNA MER1_type 136 205 -4 1047 273 39 56 chr2 12213167 12213722 -238474132 + MLT1G3 LTR MaLR 1 485 -45 288 0 0 0 chr2 12213722 12213754 -238474100 + (TG)n Simple_repeat Simple_repeat 1 32 0 1047 273 39 56 chr2 12213754 12213800 -238474054 + MLT1G3 LTR MaLR 485 530 0 224 305 12 12 chr2 12214187 12214269 -238473585 + MIR SINE MIR 99 180 -82 2064 100 33 10 chr2 12215535 12215836 -238472018 - AluY SINE Alu -3 308 1 2436 77 0 26 chr2 12216320 12216630 -238471224 + AluSp SINE Alu 1 302 -11 279 351 131 16 chr2 12216634 12216825 -238471029 - MIR SINE MIR -13 249 37 2022 234 66 38 chr2 12216913 12217515 -238470339 + MLT1E2 LTR MaLR 8 626 0 180 125 0 0 chr2 12217532 12217564 -238470290 + (TG)n Simple_repeat Simple_repeat 2 33 0 273 409 22 0 chr2 12218252 12218389 -238469465 - L2 LINE L2 -31 3241 3102 2197 114 0 0 chr2 12218830 12219111 -238468743 + AluSc SINE Alu 1 281 -28 262 0 0 0 chr2 12219111 12219140 -238468714 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 335 223 21 34 chr2 12220243 12220362 -238467492 - LTR33A LTR ERVL -16 779 389 3024 175 19 7 chr2 12220364 12220902 -238466952 + L1MC/D LINE L1 5276 5819 -514 3388 147 10 34 chr2 12220902 12221145 -238466709 + L1MC1 LINE L1 5757 6004 -329 2394 76 13 0 chr2 12221145 12221448 -238466406 + AluSg SINE Alu 1 307 -3 3388 147 10 34 chr2 12221448 12221788 -238466066 + L1MC1 LINE L1 6004 6328 -5 256 252 103 52 chr2 12222151 12222306 -238465548 - LTR50 LTR ERVL -614 181 19 235 329 92 48 chr2 12222410 12222638 -238465216 - MIR SINE MIR -5 257 20 410 326 93 33 chr2 12223803 12224018 -238463836 - MIR SINE MIR -6 256 29 1960 165 17 31 chr2 12224818 12225169 -238462685 - MER7A DNA MER2_type -1 345 2 1183 191 58 95 chr2 12226405 12226529 -238461325 + MSTD LTR MaLR 60 187 -209 1565 155 0 54 chr2 12226529 12226807 -238461047 - AluSx SINE Alu -11 301 39 1183 191 58 95 chr2 12226807 12227028 -238460826 + MSTD LTR MaLR 187 392 -4 195 293 76 88 chr2 12227051 12227300 -238460554 - L2 LINE L2 -38 3275 3030 329 376 20 36 chr2 12227523 12227773 -238460081 - L2 LINE L2 -570 2744 2499 764 301 53 4 chr2 12228151 12228278 -238459576 + MIR SINE MIR 4 123 -139 4818 98 71 8 chr2 12228278 12228994 -238458860 + L1MA1 LINE L1 5542 6302 0 764 301 53 4 chr2 12228994 12229112 -238458742 + MIR SINE MIR 123 261 -1 305 295 13 0 chr2 12229209 12229287 -238458567 + L2 LINE L2 3234 3312 -1 2428 68 3 3 chr2 12229456 12229750 -238458104 - AluSq SINE Alu -15 298 5 8044 133 42 107 chr2 12230301 12232117 -238455737 - pTR5 LTR ERV1 -1 2437 741 297 0 0 0 chr2 12233173 12233206 -238454648 + (CA)n Simple_repeat Simple_repeat 2 34 0 266 190 52 0 chr2 12233275 12233333 -238454521 - MLT1K LTR MaLR -5 583 523 617 343 102 26 chr2 12233600 12234023 -238453831 - MLT1K LTR MaLR -131 457 3 276 367 48 37 chr2 12234078 12234266 -238453588 + L2 LINE L2 2898 3087 -185 192 222 0 0 chr2 12234399 12234435 -238453419 - L2 LINE L2 -12 3301 3266 243 88 0 0 chr2 12234458 12234492 -238453362 + (TG)n Simple_repeat Simple_repeat 1 34 0 254 265 36 12 chr2 12234504 12234587 -238453267 - MIR3 SINE MIR -6 202 118 248 175 16 0 chr2 12234798 12234861 -238452993 + CT-rich Low_complexity Low_complexity 2 65 0 251 340 154 26 chr2 12235577 12236111 -238451743 - L2 LINE L2 -37 3276 2662 1048 263 56 91 chr2 12236149 12236458 -238451396 + MLT1F1 LTR MaLR 67 352 -215 2217 149 37 21 chr2 12236458 12236840 -238451014 - MLT1B LTR MaLR -2 388 1 1048 263 56 91 chr2 12236840 12237047 -238450807 + MLT1F1 LTR MaLR 352 565 -2 1454 244 13 21 chr2 12237050 12237544 -238450310 + MLT1F-int LTR MaLR 1 606 -765 3436 148 0 0 chr2 12237745 12238231 -238449623 - MER66B LTR ERV1 0 486 1 296 331 62 38 chr2 12238275 12238435 -238449419 + MLT1F-int LTR MaLR 693 856 -515 320 286 135 0 chr2 12238856 12238982 -238448872 + MLT1F-int LTR MaLR 1227 1369 -2 1231 217 72 136 chr2 12238988 12239458 -238448396 + MLT1F LTR MaLR 5 433 -109 2305 77 0 51 chr2 12239458 12239771 -238448083 - AluY SINE Alu -14 297 1 1231 217 72 136 chr2 12239771 12239872 -238447982 + MLT1F LTR MaLR 433 539 -3 218 245 0 20 chr2 12239873 12239922 -238447932 - L2 LINE L2 -644 2670 2623 714 261 48 24 chr2 12240324 12240661 -238447193 - L1M4 LINE L1 -2815 3331 2987 1863 252 62 22 chr2 12240661 12241213 -238446641 + MER76 LTR ERV 1 574 -114 783 97 0 9 chr2 12241231 12241345 -238446509 + LOR1a LTR ERV1 1 113 -384 2442 66 0 3 chr2 12241900 12242205 -238445649 + AluYa5 SINE Alu 1 304 -7 24 32 0 0 chr2 12242417 12242448 -238445406 + AT_rich Low_complexity Low_complexity 1 31 0 1185 244 86 44 chr2 12242587 12243063 -238444791 - LTR33 LTR ERVL -25 496 1 1067 181 10 5 chr2 12243280 12243473 -238444381 + MER50 LTR ERV1 1 194 -540 2028 129 0 0 chr2 12243629 12243916 -238443938 + AluSx SINE Alu 1 287 -25 433 263 61 37 chr2 12244257 12244546 -238443308 + L1ME3A LINE L1 2725 3079 -3067 3696 209 6 0 chr2 12244546 12245244 -238442610 + L1MB8 LINE L1 5475 6176 -2 433 263 61 37 chr2 12245244 12245337 -238442517 + L1ME3A LINE L1 3079 3168 -2978 311 322 0 0 chr2 12245476 12245566 -238442288 + L1MC4 LINE L1 6614 6703 -1339 6154 97 6 0 chr2 12245572 12246621 -238441233 - L1PA8A LINE L1 -18 6113 5037 797 155 6 98 chr2 12246632 12246806 -238441048 - MER58A DNA MER1_type -10 214 57 230 183 167 0 chr2 12246829 12246889 -238440965 - Charlie8 DNA MER1_type -2347 70 1 313 200 21 84 chr2 12246925 12247020 -238440834 - MER58A DNA MER1_type -18 89 1 * 607 207 0 16 chr2 12247020 12247139 -238440715 + MER105 DNA DNA 46 162 -42 905 277 96 54 chr2 12247256 12247923 -238439931 + L1ME3A LINE L1 3257 3958 -2188 2271 90 0 0 chr2 12247923 12248223 -238439631 + AluY SINE Alu 2 301 -10 905 277 96 54 chr2 12248223 12248277 -238439577 + L1ME3A LINE L1 3958 4008 -2138 381 326 6 6 chr2 12248371 12248549 -238439305 + L1ME3A LINE L1 5773 5950 -220 317 303 53 86 chr2 12248816 12249060 -238438794 + MLT1L LTR MaLR 352 587 -28 264 301 24 49 chr2 12249602 12249725 -238438129 - MIR SINE MIR -100 162 43 488 187 22 22 chr2 12249787 12249926 -238437928 + CT-rich Low_complexity Low_complexity 2 140 0 555 204 95 7 chr2 12250482 12250629 -238437225 - MER5A DNA MER1_type -26 163 4 673 192 68 14 chr2 12250635 12250781 -238437073 + MER105 DNA DNA 49 202 -2 383 298 274 4 chr2 12250787 12251032 -238436822 + L2 LINE L2 2248 2558 -756 348 254 234 43 chr2 12251070 12251351 -238436503 + L2 LINE L2 2724 3036 -277 812 159 0 0 chr2 12251413 12251539 -238436315 - FLAM_C SINE Alu -7 136 11 505 278 63 10 chr2 12251550 12251755 -238436099 + L2 LINE L2 3098 3313 0 227 239 0 70 chr2 12252558 12252629 -238435225 - MIR3 SINE MIR -32 176 111 534 262 52 6 chr2 12253567 12253739 -238434115 + MLT1H LTR MaLR 1 180 -369 256 297 22 0 chr2 12253832 12253923 -238433931 + MER117 DNA MER1_type 5 97 -100 686 256 68 34 chr2 12254225 12254491 -238433363 + Charlie2b DNA MER1_type 5 279 -2503 290 311 107 0 chr2 12254527 12254630 -238433224 + Charlie2b DNA MER1_type 559 672 -2110 255 211 0 18 chr2 12254636 12254693 -238433161 + CT-rich Low_complexity Low_complexity 2 57 0 26 0 0 0 chr2 12254738 12254764 -238433090 + AT_rich Low_complexity Low_complexity 1 26 0 245 200 27 40 chr2 12254897 12254972 -238432882 + Charlie2b DNA MER1_type 2637 2710 -72 732 274 11 6 chr2 12254985 12255179 -238432675 + MLT1F LTR MaLR 1 244 -351 2110 132 3 3 chr2 12255909 12256213 -238431641 + AluSx SINE Alu 1 304 -8 192 311 28 5 chr2 12256582 12256657 -238431197 - MIR SINE MIR -110 98 19 1517 197 17 24 chr2 12256713 12257007 -238430847 - AluJo SINE Alu -20 292 1 212 289 157 0 chr2 12258072 12258193 -238429661 - MIR SINE MIR -12 250 111 615 324 57 5 chr2 12258444 12258654 -238429200 - MIR SINE MIR -37 225 5 1218 270 99 42 chr2 12258938 12259412 -238428442 + MLT1D LTR MaLR 5 505 0 1883 233 20 15 chr2 12259673 12260077 -238427777 - MLT2D LTR ERVL -8 406 1 180 287 58 35 chr2 12260868 12260955 -238426899 + MIR SINE MIR 26 114 -148 482 130 120 30 chr2 12260964 12261064 -238426790 - ORSL DNA AcHobo -8 267 159 38 96 0 0 chr2 12261081 12261196 -238426658 + AT_rich Low_complexity Low_complexity 1 115 0 267 220 0 17 chr2 12261245 12261304 -238426550 + MLT1B LTR MaLR 114 171 -219 321 254 100 23 chr2 12261337 12261467 -238426387 - ORSL DNA AcHobo -135 140 1 191 195 73 0 chr2 12261468 12261509 -238426345 + MIR3 SINE MIR 111 154 -54 287 313 65 52 chr2 12261646 12261876 -238425978 + MIR SINE MIR 17 249 -13 1722 207 41 34 chr2 12262206 12262593 -238425261 + MLT1B LTR MaLR 1 390 0 187 330 64 32 chr2 12263303 12263397 -238424457 + MIR SINE MIR 42 138 -70 222 287 104 96 chr2 12264100 12264330 -238423524 + L2 LINE L2 3040 3271 -1 753 267 95 4 chr2 12264786 12265018 -238422836 + MIR SINE MIR 10 262 0 334 338 40 26 chr2 12265629 12265780 -238422074 + MIR3 SINE MIR 39 191 -17 939 223 51 0 chr2 12265819 12266016 -238421838 + MER3 DNA MER1_type 3 209 0 267 348 26 19 chr2 12266298 12266453 -238421401 + L2 LINE L2 3158 3313 0 254 314 48 19 chr2 12266451 12266556 -238421298 - L2 LINE L2 -4 3268 3161 * 237 372 73 15 chr2 12266752 12266889 -238420965 + L2 LINE L2 3121 3265 -7 618 166 11 160 chr2 12266998 12267185 -238420669 + MLT1D LTR MaLR 8 166 -339 1178 198 23 163 chr2 12267286 12267721 -238420133 + MLT2D LTR ERVL 5 395 -19 352 136 39 19 chr2 12267722 12267825 -238420029 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 1061 157 25 44 chr2 12267833 12268037 -238419817 + Tigger2 DNA MER2_type 11 210 -2508 824 163 34 7 chr2 12268036 12268183 -238419671 + Tigger2 DNA MER2_type 2554 2704 -14 * 373 109 0 0 chr2 12268187 12268242 -238419612 + MLT2C1 LTR ERVL 349 397 0 644 240 174 5 chr2 12268242 12268438 -238419416 + MLT1D LTR MaLR 277 505 0 204 40 0 0 chr2 12269093 12269118 -238418736 + (TTC)n Simple_repeat Simple_repeat 2 26 0 1487 194 37 7 chr2 12269123 12269396 -238418458 - AluJo SINE Alu -31 281 1 2332 154 19 26 chr2 12269566 12269995 -238417859 - MSTC LTR MaLR 0 428 3 489 350 25 10 chr2 12270003 12270206 -238417648 - MIR SINE MIR -18 244 39 202 118 29 0 chr2 12271183 12271217 -238416637 + CT-rich Low_complexity Low_complexity 5 39 0 1643 238 85 48 chr2 12271234 12271903 -238415951 - L1MD2 LINE L1 -13 6329 5636 774 295 116 34 chr2 12271907 12272588 -238415266 - L1MD2 LINE L1 -2639 3490 2754 858 210 49 10 chr2 12272597 12272802 -238415052 - L1MC/D LINE L1 -553 5689 5477 277 291 200 0 chr2 12273357 12273467 -238414387 - MER91A DNA MER1_type 0 196 65 713 277 90 93 chr2 12273968 12274073 -238413781 - L1MD2 LINE L1 -4882 1237 1133 2416 90 3 0 chr2 12274073 12274374 -238413480 - AluSg SINE Alu -8 302 1 713 277 90 93 chr2 12274374 12274386 -238413468 - L1MD2 LINE L1 -4986 1133 1122 2181 140 0 0 chr2 12274386 12274693 -238413161 - AluSx SINE Alu 0 312 6 713 277 90 93 chr2 12274693 12275227 -238412627 - L1MD2 LINE L1 -4997 1122 587 1036 83 0 0 chr2 12275292 12275424 -238412430 - AluY SINE Alu -17 294 163 358 388 65 4 chr2 12275445 12275677 -238412177 - L1MD2 LINE L1 -5721 398 153 1995 104 34 83 chr2 12276384 12276711 -238411143 - AluSq SINE Alu -2 311 1 834 138 26 0 chr2 12276711 12276863 -238410991 + MER50 LTR ERV1 566 721 -13 1827 126 41 0 chr2 12277041 12277347 -238410507 + AluSx SINE Alu 1 317 0 248 255 160 13 chr2 12277612 12277843 -238410011 - L1MEd LINE L1 -4887 1232 968 249 275 29 0 chr2 12278984 12279053 -238408801 - MIR SINE MIR -109 153 83 347 341 58 23 chr2 12280161 12280334 -238407520 - MIR3 SINE MIR -12 196 18 728 221 111 0 chr2 12280454 12280653 -238407201 + MER96B DNA MER1_type? 197 417 0 1011 197 26 22 chr2 12281404 12281673 -238406181 - MER58B DNA MER1_type -10 331 62 228 234 0 0 chr2 12281980 12282044 -238405810 + T-rich Low_complexity Low_complexity 1 64 0 408 71 0 0 chr2 12282713 12282769 -238405085 + (TG)n Simple_repeat Simple_repeat 2 57 0 230 292 56 0 chr2 12283338 12283410 -238404444 - MIR SINE MIR -28 234 159 257 200 18 0 chr2 12283422 12283477 -238404377 + MIR SINE MIR 13 68 -194 963 237 157 59 chr2 12283522 12283982 -238403872 + MLT1D LTR MaLR 1 505 0 340 267 0 0 chr2 12283982 12284068 -238403786 + MIR SINE MIR 163 248 -14 424 281 96 37 chr2 12284583 12285152 -238402702 + L1MEc LINE L1 1478 2085 -4874 600 185 29 6 chr2 12285238 12285411 -238402443 + GA-rich Low_complexity Low_complexity 2 178 0 203 213 0 21 chr2 12285454 12285501 -238402353 + A-rich Low_complexity Low_complexity 1 46 0 634 276 71 51 chr2 12285502 12285568 -238402286 + L1MEc LINE L1 2321 2384 -4754 2188 141 0 0 chr2 12285568 12285873 -238401981 + AluY SINE Alu 1 305 -6 634 276 71 51 chr2 12285873 12286296 -238401558 + L1MEc LINE L1 2384 2820 -4318 329 153 59 0 chr2 12286501 12286586 -238401268 + L1MEc LINE L1 3712 3801 -3156 2352 152 5 5 chr2 12286666 12287068 -238400786 - LOR1a LTR ERV1 -2 495 94 713 179 49 31 chr2 12287433 12287656 -238400198 - AluY SINE Alu -84 227 1 2184 97 14 3 chr2 12287685 12287975 -238399879 + AluY SINE Alu 1 293 -18 1855 238 99 34 chr2 12288002 12288590 -238399264 - MLT1E2 LTR MaLR 0 626 1 207 96 58 0 chr2 12289223 12289275 -238398579 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 227 352 48 38 chr2 12289757 12289862 -238397992 + MIR SINE MIR 80 185 -77 259 274 73 37 chr2 12291079 12291243 -238396611 + L1ME LINE L1 5406 5575 -546 216 0 0 0 chr2 12291490 12291514 -238396340 + (A)n Simple_repeat Simple_repeat 1 24 0 47 33 0 0 chr2 12291963 12292024 -238395830 + AT_rich Low_complexity Low_complexity 1 61 0 265 406 31 16 chr2 12292491 12292619 -238395235 - L2 LINE L2 -28 3244 3115 299 313 18 6 chr2 12293301 12293464 -238394390 + (TGAA)n Simple_repeat Simple_repeat 3 167 0 1706 125 0 99 chr2 12294081 12294385 -238393469 - AluSx SINE Alu -3 309 36 322 395 17 31 chr2 12295168 12295457 -238392397 + L3 LINE CR1 1267 1551 -26 26 0 0 0 chr2 12297174 12297200 -238390654 + AT_rich Low_complexity Low_complexity 1 26 0 530 216 0 97 chr2 12297871 12297999 -238389855 + MER5B DNA MER1_type 1 109 -69 2931 113 9 19 chr2 12297999 12298460 -238389394 - L1PA10 LINE L1 -4 6164 5709 530 216 0 97 chr2 12298460 12298507 -238389347 + MER5B DNA MER1_type 109 159 -19 200 406 100 29 chr2 12299379 12299660 -238388194 - L2 LINE L2 -31 3241 2941 269 293 24 67 chr2 12300101 12300265 -238387589 - L1MEd LINE L1 -5643 476 320 210 150 0 0 chr2 12300388 12300428 -238387426 + (CA)n Simple_repeat Simple_repeat 2 41 0 242 227 15 15 chr2 12300484 12300550 -238387304 - MLT1G1 LTR MaLR 0 595 530 2302 106 3 6 chr2 12301275 12301586 -238386268 + AluSx SINE Alu 1 310 -2 1079 248 95 47 chr2 12301755 12302198 -238385656 + MLT1L LTR MaLR 104 567 -48 41 0 0 0 chr2 12302827 12302868 -238384986 + AT_rich Low_complexity Low_complexity 1 41 0 223 236 9 28 chr2 12303094 12303200 -238384654 + A-rich Low_complexity Low_complexity 4 107 0 182 268 18 18 chr2 12303292 12303348 -238384506 + L2 LINE L2 2995 3050 -222 2578 45 0 7 chr2 12303407 12303716 -238384138 - AluY SINE Alu -4 307 1 1947 165 74 20 chr2 12303763 12304168 -238383686 - MSTA LTR MaLR -1 427 1 1119 197 23 40 chr2 12304246 12304718 -238383136 - pTR5 LTR ERV1 -1189 1249 741 955 236 25 0 chr2 12304801 12305004 -238382850 + MER58A DNA MER1_type 2 209 -15 3782 9 0 0 chr2 12305007 12305453 -238382401 + L1HS LINE L1 5710 6155 0 25 0 0 0 chr2 12305453 12305478 -238382376 + AT_rich Low_complexity Low_complexity 1 25 0 240 59 0 0 chr2 12305495 12305529 -238382325 + (A)n Simple_repeat Simple_repeat 1 34 0 251 404 0 34 chr2 12305573 12305719 -238382135 + L2 LINE L2 3084 3224 -48 451 320 26 7 chr2 12305767 12305920 -238381934 - MIR3 SINE MIR -38 170 15 211 376 64 18 chr2 12307302 12307411 -238380443 + L2 LINE L2 3118 3231 -41 303 274 36 0 chr2 12308610 12308694 -238379160 - MIR SINE MIR -122 140 54 304 191 0 0 chr2 12309152 12309199 -238378655 - L2 LINE L2 -21 3251 3205 351 330 16 69 chr2 12309338 12309542 -238378312 - MIR SINE MIR -45 217 18 314 273 78 23 chr2 12309716 12309844 -238378010 - L1ME4a LINE L1 -115 6006 5872 1701 218 76 44 chr2 12309846 12310396 -238377458 - MLT1E2 LTR MaLR -2 624 57 351 259 74 0 chr2 12310466 12310574 -238377280 - L2 LINE L2 -9 3304 3189 340 275 206 5 chr2 12310621 12310839 -238377015 - L1ME4a LINE L1 -299 5822 5561 22 0 0 0 chr2 12311258 12311280 -238376574 + AT_rich Low_complexity Low_complexity 1 22 0 239 276 0 0 chr2 12313170 12313228 -238374626 + (TG)n Simple_repeat Simple_repeat 1 58 0 610 311 27 32 chr2 12313913 12314132 -238373722 - MIR SINE MIR -19 243 26 324 0 0 0 chr2 12314185 12314221 -238373633 + (CA)n Simple_repeat Simple_repeat 2 37 0 227 244 23 12 chr2 12314704 12314790 -238373064 - L1 LINE L1 -1110 5036 4950 304 281 116 66 chr2 12314973 12315215 -238372639 - L1 LINE L1 -3228 2918 2665 191 36 36 0 chr2 12315610 12315638 -238372216 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1923 127 0 24 chr2 12315641 12315932 -238371922 - AluSx SINE Alu -28 284 1 1256 303 78 16 chr2 12315975 12317392 -238370462 - L1ME3 LINE L1 -81 6081 4570 367 310 92 15 chr2 12317406 12317677 -238370177 - L1ME3 LINE L1 -1749 4397 4106 307 279 109 57 chr2 12317981 12318228 -238369626 + L1ME4a LINE L1 5825 6084 -37 2088 122 3 3 chr2 12319508 12319804 -238368050 + AluSx SINE Alu 1 296 -16 1920 156 68 11 chr2 12319917 12320270 -238367584 - THE1C LTR MaLR -2 373 1 261 351 45 19 chr2 12320817 12320971 -238366883 - MIR SINE MIR -84 178 21 433 176 12 0 chr2 12321658 12321743 -238366111 - L1PA16 LINE L1 -5 6161 6076 243 235 17 9 chr2 12323423 12323538 -238364316 + CT-rich Low_complexity Low_complexity 1 116 0 24 77 0 0 chr2 12324312 12324364 -238363490 + AT_rich Low_complexity Low_complexity 1 52 0 1827 132 3 64 chr2 12325192 12325518 -238362336 - AluY SINE Alu -5 306 1 368 355 87 19 chr2 12328423 12328663 -238359191 + MIR SINE MIR 2 256 -6 393 22 0 0 chr2 12329258 12329304 -238358550 + (CA)n Simple_repeat Simple_repeat 1 46 0 191 181 14 0 chr2 12329310 12329382 -238358472 + CT-rich Low_complexity Low_complexity 2 74 0 1227 212 20 7 chr2 12329881 12330173 -238357681 - L1MA8 LINE L1 -2 6289 5994 202 265 29 29 chr2 12330214 12330282 -238357572 - L2 LINE L2 -25 3288 3221 543 238 126 7 chr2 12331507 12331650 -238356204 - MLT1J LTR MaLR -328 183 24 641 290 61 49 chr2 12331823 12332398 -238355456 + L1M4 LINE L1 3808 4389 -1757 23 0 0 0 chr2 12332665 12332688 -238355166 + AT_rich Low_complexity Low_complexity 1 23 0 2090 128 75 20 chr2 12332719 12333064 -238354790 + THE1B LTR MaLR 1 364 0 2970 123 0 19 chr2 12334181 12334567 -238353287 - L1PA15 LINE L1 -4 6161 5769 180 0 0 0 chr2 12334567 12334587 -238353267 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2093 93 11 0 chr2 12334587 12334865 -238352989 - AluY SINE Alu -30 281 1 2970 123 0 19 chr2 12334865 12334940 -238352914 - L1PA15 LINE L1 -394 5771 5708 602 303 95 36 chr2 12335026 12335578 -238352276 - L1MCa LINE L1 -5826 669 34 264 59 0 0 chr2 12336029 12336063 -238351791 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 215 361 76 13 chr2 12336130 12336288 -238351566 - MIR SINE MIR -64 198 31 258 237 17 0 chr2 12336823 12336882 -238350972 + L3 LINE CR1 1313 1372 -205 3321 236 44 29 chr2 12337015 12338345 -238349509 - L1M4c LINE L1 -4480 2166 817 264 222 0 0 chr2 12338345 12338417 -238349437 + A-rich Low_complexity Low_complexity 1 72 0 455 285 32 0 chr2 12338438 12338561 -238349293 - L1M4c LINE L1 -5804 738 612 1398 224 49 29 chr2 12338570 12338919 -238348935 + MLT1A1 LTR MaLR 10 365 0 292 339 66 19 chr2 12338929 12339186 -238348668 - L1M4c LINE L1 -5936 606 338 1826 179 39 18 chr2 12339645 12340028 -238347826 + MLT1B LTR MaLR 1 467 0 978 302 109 10 chr2 12340195 12340691 -238347163 + HAL1 LINE L1 202 746 -1761 345 247 0 0 chr2 12340694 12340771 -238347083 - MER105 DNA DNA -8 196 120 363 222 40 10 chr2 12340819 12340918 -238346936 - MER105 DNA DNA -98 106 5 1947 269 62 31 chr2 12340947 12341851 -238346003 + HAL1 LINE L1 788 1719 -788 24 32 0 0 chr2 12342018 12342049 -238345805 + AT_rich Low_complexity Low_complexity 1 31 0 181 309 55 0 chr2 12342132 12342187 -238345667 + MIR SINE MIR 73 130 -78 194 262 0 0 chr2 12342627 12342669 -238345185 + L2 LINE L2 3219 3260 -12 548 340 60 28 chr2 12343442 12343727 -238344127 - L3 LINE CR1 -48 1529 1236 283 250 42 14 chr2 12344540 12344612 -238343242 + MIR SINE MIR 21 94 -114 573 313 63 35 chr2 12345597 12345964 -238341890 + LTR33 LTR ERVL 90 466 -55 474 291 128 0 chr2 12346064 12346142 -238341712 + MIR SINE MIR 28 95 -167 523 75 12 12 chr2 12346142 12346222 -238341632 + MADE1 DNA Mariner 1 80 0 474 291 128 0 chr2 12346222 12346322 -238341532 + MIR SINE MIR 95 229 -33 204 320 51 13 chr2 12346989 12347067 -238340787 + MIR SINE MIR 80 160 -102 2131 116 3 7 chr2 12347185 12347479 -238340375 - AluSp SINE Alu -14 299 7 26 30 0 0 chr2 12347604 12347637 -238340217 + AT_rich Low_complexity Low_complexity 1 33 0 452 264 74 7 chr2 12347748 12347896 -238339958 - MIR SINE MIR -15 247 90 1744 179 72 19 chr2 12347901 12348295 -238339559 + MLT1D LTR MaLR 6 503 -2 270 309 0 100 chr2 12348297 12348407 -238339447 - MIR SINE MIR -155 107 9 1055 235 129 62 chr2 12348530 12348991 -238338863 + MLT1H LTR MaLR 14 547 -2 447 311 87 13 chr2 12349147 12349356 -238338498 - MIR SINE MIR -31 231 12 2404 114 17 3 chr2 12350088 12350438 -238337416 - THE1A LTR MaLR 0 355 1 11139 101 23 1 chr2 12350438 12351985 -238335869 - THE1A-int LTR MaLR 0 1580 1 479 196 74 12 chr2 12352195 12352313 -238335541 + MER20B DNA MER1_type 36 159 -60 5208 209 65 41 chr2 12352400 12353744 -238334110 + L1MC3 LINE L1 5530 6912 -873 1789 155 0 31 chr2 12353744 12354063 -238333791 + AluSx SINE Alu 1 310 0 5208 209 65 41 chr2 12354063 12354136 -238333718 + L1MC3 LINE L1 6912 6982 -803 29 60 0 0 chr2 12354169 12354219 -238333635 + AT_rich Low_complexity Low_complexity 1 50 0 311 183 24 24 chr2 12354267 12354349 -238333505 + L1MC3 LINE L1 7014 7095 -690 281 237 32 32 chr2 12354349 12354442 -238333412 + MLT1F1 LTR MaLR 33 125 -442 1384 191 28 7 chr2 12354448 12354882 -238332972 + L1MC3 LINE L1 7197 7757 -28 207 0 0 0 chr2 12354882 12354905 -238332949 + (TC)n Simple_repeat Simple_repeat 2 24 0 275 229 24 0 chr2 12354905 12354988 -238332866 - L1MC4 LINE L1 -1341 6701 6617 1163 279 53 36 chr2 12355159 12355721 -238332133 + MER20B DNA MER1_type 211 782 -1 337 347 90 0 chr2 12355937 12356159 -238331695 + MLT1J2 LTR MaLR 209 450 0 259 333 101 12 chr2 12356161 12356329 -238331525 + MIR SINE MIR 56 238 -24 198 0 0 0 chr2 12357968 12357990 -238329864 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 191 337 54 22 chr2 12358809 12358901 -238328953 + L2 LINE L2 3171 3265 -7 1367 217 39 22 chr2 12359230 12359589 -238328265 - MLT1A1 LTR MaLR 0 365 1 240 272 0 86 chr2 12360249 12360330 -238327524 + MIR SINE MIR 67 140 -68 1810 169 46 25 chr2 12360758 12361125 -238326729 + THE1C LTR MaLR 1 375 0 298 267 112 0 chr2 12361960 12362076 -238325778 + L3 LINE CR1 1289 1417 -160 300 308 33 0 chr2 12362349 12362440 -238325414 + L2 LINE L2 2264 2357 -957 598 221 55 0 chr2 12362443 12362570 -238325284 + L1PB4 LINE L1 6022 6155 -1 191 36 36 0 chr2 12362573 12362601 -238325253 + (GA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr2 12363107 12363133 -238324721 + (TG)n Simple_repeat Simple_repeat 1 26 0 23 68 0 0 chr2 12363213 12363257 -238324597 + AT_rich Low_complexity Low_complexity 1 44 0 1201 259 84 30 chr2 12363765 12364285 -238323569 + MLT1E LTR MaLR 1 593 0 493 283 28 14 chr2 12364979 12365104 -238322750 - L2 LINE L2 -5 3308 3179 2060 127 34 45 chr2 12365104 12365483 -238322371 - THE1C LTR MaLR 0 375 1 493 283 28 14 chr2 12365483 12365502 -238322352 - L2 LINE L2 -134 3179 3162 732 276 44 27 chr2 12366743 12367036 -238320818 - MER20B DNA MER1_type -288 495 198 2258 61 20 20 chr2 12367231 12367528 -238320326 - AluY SINE Alu -14 297 1 27 49 0 0 chr2 12367607 12367648 -238320206 + AT_rich Low_complexity Low_complexity 1 41 0 1418 222 11 3 chr2 12367648 12367932 -238319922 - AluJo SINE Alu -16 286 1 1213 93 114 41 chr2 12367937 12368183 -238319671 - L1MA8 LINE L1 -3 6288 6025 14264 143 17 8 chr2 12368506 12370902 -238316952 + Tigger1 DNA MER2_type 1 2417 -1 1367 132 30 8 chr2 12371122 12371357 -238316497 - L1MA9 LINE L1 -1 6311 6072 1165 313 79 34 chr2 12371837 12371894 -238315960 - LTR16C LTR ERVL 0 491 438 1552 195 45 25 chr2 12371894 12372248 -238315606 - MLT1A1 LTR MaLR 0 365 5 1165 313 79 34 chr2 12372248 12372659 -238315195 - LTR16C LTR ERVL -53 438 2 25 31 0 0 chr2 12374260 12374292 -238313562 + AT_rich Low_complexity Low_complexity 1 32 0 352 306 47 12 chr2 12374541 12374711 -238313143 + MIR SINE MIR 79 254 -8 234 341 0 11 chr2 12374717 12374805 -238313049 + CT-rich Low_complexity Low_complexity 1 87 0 1934 93 0 8 chr2 12374838 12375107 -238312747 + AluSc SINE Alu 37 303 0 206 347 112 0 chr2 12375143 12375241 -238312613 - L2 LINE L2 -12 3301 3193 * 209 355 73 0 chr2 12375208 12375332 -238312522 + MIR SINE MIR 95 227 -35 261 163 0 0 chr2 12375725 12375774 -238312080 + (TG)n Simple_repeat Simple_repeat 2 50 0 725 133 0 0 chr2 12376102 12376207 -238311647 - MSTA LTR MaLR -323 105 1 260 173 0 0 chr2 12376757 12376809 -238311045 + L1MC4 LINE L1 6652 6703 -1339 327 164 0 0 chr2 12376809 12376870 -238310984 + (CATA)n Simple_repeat Simple_repeat 4 64 0 201 341 0 0 chr2 12376884 12376966 -238310888 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 552 309 106 29 chr2 12377013 12377427 -238310427 - MLT1J1 LTR MaLR 0 446 1 1510 156 66 43 chr2 12377693 12377994 -238309860 + AluSg SINE Alu 1 308 -2 25 31 0 0 chr2 12379040 12379072 -238308782 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 12379540 12379561 -238308293 + AT_rich Low_complexity Low_complexity 1 21 0 269 358 16 16 chr2 12379902 12380025 -238307829 - L2 LINE L2 -554 2760 2638 209 198 210 25 chr2 12382268 12382349 -238305505 - MIR SINE MIR -70 138 43 190 270 34 67 chr2 12382384 12382473 -238305381 - L2 LINE L2 -8 3264 3179 315 154 10 48 chr2 12383261 12383365 -238304489 + A-rich Low_complexity Low_complexity 1 100 0 321 281 7 44 chr2 12383379 12383514 -238304340 + L2 LINE L2 2829 2958 -355 332 273 18 92 chr2 12383537 12383764 -238304090 + L2 LINE L2 3077 3286 -27 346 321 25 56 chr2 12384221 12384417 -238303437 + MIR3 SINE MIR 13 202 -6 198 0 0 0 chr2 12385692 12385714 -238302140 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 181 306 97 45 chr2 12386357 12386491 -238301363 - MIR SINE MIR -113 149 9 318 253 0 0 chr2 12387370 12387445 -238300409 + L1MC4 LINE L1 6629 6703 -1339 272 200 14 0 chr2 12387536 12387606 -238300248 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 382 313 67 0 chr2 12388224 12388358 -238299496 + MIR SINE MIR 103 245 -17 221 146 21 0 chr2 12388371 12388419 -238299435 + (CA)n Simple_repeat Simple_repeat 1 49 0 207 0 0 0 chr2 12388712 12388735 -238299119 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5439 149 8 42 chr2 12389156 12389888 -238297966 - L1MA4A LINE L1 -14 6289 5603 1914 126 3 50 chr2 12389888 12390205 -238297649 + AluSx SINE Alu 9 310 -2 5439 149 8 42 chr2 12390205 12390544 -238297310 - L1MA4A LINE L1 -700 5603 5254 265 274 12 24 chr2 12390643 12390727 -238297127 + MLT1L LTR MaLR 3 85 -530 306 284 55 0 chr2 12391302 12391429 -238296425 - MIR SINE MIR -56 206 73 321 336 36 14 chr2 12391498 12391769 -238296085 + L2 LINE L2 2766 3083 -189 193 364 34 11 chr2 12391852 12391940 -238295914 + MER5A DNA MER1_type 82 171 -18 485 301 38 25 chr2 12394086 12394569 -238293285 + L1MCc LINE L1 652 1301 -5125 374 261 87 26 chr2 12394580 12394756 -238293098 + L1MCc LINE L1 1345 1677 -4930 225 297 65 13 chr2 12394756 12394911 -238292943 + L1MCa LINE L1 1464 1626 -4800 14932 154 33 15 chr2 12394975 12397644 -238290210 + Tigger2 DNA MER2_type 1 2718 0 198 236 0 0 chr2 12397705 12397760 -238290094 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 418 269 83 19 chr2 12397771 12397987 -238289867 + L1ME2 LINE L1 5254 5483 -679 379 312 19 26 chr2 12397991 12398145 -238289709 + LTR52 LTR ERVL 132 284 -137 1790 254 62 29 chr2 12398171 12398856 -238288998 + L1ME2 LINE L1 5442 6157 -7 788 232 121 10 chr2 12400151 12400349 -238287505 - MER58A DNA MER1_type -2 222 3 185 341 57 0 chr2 12400912 12401000 -238286854 + L2 LINE L2 2307 2399 -915 468 223 14 93 chr2 12401275 12401362 -238286492 + MLT1H LTR MaLR 53 127 -422 2075 106 0 48 chr2 12401362 12401673 -238286181 - AluSx SINE Alu -12 300 5 468 223 14 93 chr2 12401673 12401724 -238286130 + MLT1H LTR MaLR 127 180 -369 468 173 15 25 chr2 12401724 12401920 -238285934 + GA-rich Low_complexity Low_complexity 1 194 0 1354 197 27 17 chr2 12402075 12402370 -238285484 - AluJo SINE Alu 0 312 15 22 0 0 0 chr2 12402992 12403014 -238284840 + AT_rich Low_complexity Low_complexity 1 22 0 237 338 119 6 chr2 12403296 12403456 -238284398 - MIR SINE MIR 0 262 85 1115 185 49 131 chr2 12404727 12405122 -238282732 - MLT1A1 LTR MaLR -1 456 1 181 280 80 0 chr2 12405512 12405562 -238282292 - MIR SINE MIR -64 144 91 2014 137 0 35 chr2 12405780 12406095 -238281759 + AluSx SINE Alu 1 304 -8 378 101 0 17 chr2 12406114 12406181 -238281673 - AluSp SINE Alu -9 293 242 461 103 0 134 chr2 12406181 12406278 -238281576 - AluSp SINE Alu -160 153 70 272 321 141 21 chr2 12406975 12407265 -238280589 - L2 LINE L2 -675 2639 2315 337 211 43 31 chr2 12407342 12407503 -238280351 + (TA)n Simple_repeat Simple_repeat 2 164 0 264 66 50 94 chr2 12407608 12407789 -238280065 + (TATAA)n Simple_repeat Simple_repeat 4 176 0 434 79 92 6 chr2 12408248 12408412 -238279442 + (TA)n Simple_repeat Simple_repeat 2 179 0 61 15 0 0 chr2 12408412 12408480 -238279374 + AT_rich Low_complexity Low_complexity 1 68 0 2003 269 93 55 chr2 12409115 12411300 -238276554 + L1ME3 LINE L1 2925 5201 -945 2464 69 3 0 chr2 12411300 12411603 -238276251 + AluY SINE Alu 1 304 -7 2003 269 93 55 chr2 12411603 12411676 -238276178 + L1ME3 LINE L1 5201 5270 -876 180 245 0 0 chr2 12411687 12411740 -238276114 + (TA)n Simple_repeat Simple_repeat 1 53 0 27 29 0 0 chr2 12411756 12411790 -238276064 + AT_rich Low_complexity Low_complexity 1 34 0 1302 261 125 39 chr2 12411842 12412597 -238275257 + L1ME3 LINE L1 5267 6100 -70 995 90 0 0 chr2 12412597 12412731 -238275123 + L1PA10 LINE L1 6031 6164 -4 1302 261 125 39 chr2 12412731 12412801 -238275053 + L1ME3 LINE L1 6100 6163 -7 195 328 103 46 chr2 12412806 12413135 -238274719 - L2 LINE L2 -1300 2014 1667 389 52 0 52 chr2 12413159 12413217 -238274637 - MLT2A1 LTR ERVL 0 453 399 224 233 0 0 chr2 12413233 12413276 -238274578 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 2473 93 77 8 chr2 12413277 12413653 -238274201 - MLT2A1 LTR ERVL -40 404 3 58 13 0 13 chr2 12414967 12414992 -238272862 + AT_rich Low_complexity Low_complexity 1 25 -50 2024 122 7 3 chr2 12414992 12415280 -238272574 + AluSp SINE Alu 1 289 -24 58 13 0 13 chr2 12415280 12415330 -238272524 + AT_rich Low_complexity Low_complexity 25 75 0 294 318 95 0 chr2 12416108 12416234 -238271620 + MIR SINE MIR 49 186 -76 426 235 29 0 chr2 12416774 12416876 -238270978 - L1MB8 LINE L1 -200 5978 5874 2566 231 45 6 chr2 12416905 12417602 -238270252 - L1MB8 LINE L1 -1049 5097 4374 24296 178 17 23 chr2 12417602 12418717 -238269137 + L1PA12 LINE L1 8 1129 -6440 183 42 0 0 chr2 12418717 12418741 -238269113 + (CAA)n Simple_repeat Simple_repeat 1 24 0 24296 178 17 23 chr2 12418741 12419705 -238268149 + L1PA12 LINE L1 1129 2098 -5471 2357 93 7 0 chr2 12419705 12420006 -238267848 - AluSq SINE Alu -4 309 7 24296 178 17 23 chr2 12420006 12421807 -238266047 + L1PA12 LINE L1 2098 3909 -3660 207 0 0 0 chr2 12421807 12421830 -238266024 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 24296 178 17 23 chr2 12421830 12423788 -238264066 + L1PA12 LINE L1 3909 7112 -457 307 255 168 37 chr2 12424780 12424941 -238262913 + MIR SINE MIR 49 230 -32 1911 154 3 3 chr2 12425169 12425461 -238262393 + AluSx SINE Alu 8 299 -13 350 321 64 32 chr2 12426443 12426575 -238261279 + L1ME3 LINE L1 3718 3844 -2302 2063 159 27 30 chr2 12426575 12426940 -238260914 - THE1B LTR MaLR 0 364 1 350 321 64 32 chr2 12426940 12427215 -238260639 + L1ME3 LINE L1 3844 4138 -2008 21 0 0 0 chr2 12427218 12427239 -238260615 + AT_rich Low_complexity Low_complexity 1 21 0 488 310 125 53 chr2 12427276 12427957 -238259897 + L1ME3 LINE L1 4205 4964 -1182 414 0 0 0 chr2 12427961 12428007 -238259847 + (CA)n Simple_repeat Simple_repeat 2 47 0 319 291 119 64 chr2 12428010 12428337 -238259517 + L1ME3 LINE L1 5002 5346 -800 394 264 53 120 chr2 12428363 12428871 -238258983 + L1ME3 LINE L1 5381 5854 -308 2296 86 0 0 chr2 12429284 12429574 -238258280 - AluSc SINE Alu -19 290 1 1097 235 87 26 chr2 12431062 12431522 -238256332 - Charlie2 DNA MER1_type -47 2815 2328 664 222 79 0 chr2 12431708 12431924 -238255930 - Charlie2a DNA MER1_type -1851 1011 779 283 91 400 0 chr2 12431927 12431982 -238255872 - MADE1 DNA Mariner -3 77 1 2182 132 83 5 chr2 12432050 12432436 -238255418 + MSTA LTR MaLR 1 416 -12 359 256 16 31 chr2 12432448 12432577 -238255277 - Charlie2a DNA MER1_type -2271 591 465 732 112 0 0 chr2 12433090 12433197 -238254657 + AluSg SINE Alu 1 107 -203 2330 95 0 0 chr2 12433214 12433520 -238254334 + AluY SINE Alu 1 306 -5 221 298 87 19 chr2 12433694 12433798 -238254056 - L2 LINE L2 -41 3231 3121 274 313 0 26 chr2 12435374 12435509 -238252345 + MIR3 SINE MIR 3 176 -32 22 0 0 0 chr2 12435597 12435619 -238252235 + AT_rich Low_complexity Low_complexity 1 22 0 336 303 35 35 chr2 12435772 12435917 -238251937 - L2 LINE L2 -1 3312 3168 1631 214 70 20 chr2 12436119 12436559 -238251295 - MLT1C LTR MaLR 0 467 6 322 278 76 49 chr2 12437694 12437838 -238250016 - MER91A DNA MER1_type -29 167 20 271 296 134 0 chr2 12438113 12438255 -238249599 + MIR SINE MIR 48 208 -54 2527 68 0 0 chr2 12438746 12439070 -238248784 + L1PA5 LINE L1 5831 6154 0 2141 199 83 6 chr2 12439846 12440338 -238247516 + L1MD2 LINE L1 5428 5957 -402 7215 170 38 6 chr2 12440384 12442782 -238245072 - L1MA4 LINE L1 -11 6289 3811 186 43 0 0 chr2 12493577 12493600 -238194254 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 302 167 0 0 chr2 12493604 12493658 -238194196 - L1MA6 LINE L1 -13 6287 6234 3483 213 21 18 chr2 12493660 12494684 -238193170 - L1MA6 LINE L1 -248 6052 5017 * 5178 144 53 19 chr2 12494681 12495597 -238192257 - THE1C-int LTR MaLR -632 948 1 1363 145 84 95 chr2 12495597 12495976 -238191878 - THE1C LTR MaLR 0 375 1 1736 278 44 29 chr2 12495976 12496494 -238191360 - L1M3b LINE L1 -5755 526 1 2056 126 48 28 chr2 12496588 12496945 -238190909 + THE1B LTR MaLR 1 364 0 21 82 0 0 chr2 12497049 12497098 -238190756 + AT_rich Low_complexity Low_complexity 1 49 0 1200 214 58 79 chr2 12497280 12497462 -238190392 - MLT1A2 LTR MaLR 0 374 190 366 23 0 0 chr2 12497462 12497505 -238190349 + (TG)n Simple_repeat Simple_repeat 1 43 0 1200 214 58 79 chr2 12497505 12497700 -238190154 - MLT1A2 LTR MaLR -184 190 5 2290 229 4 17 chr2 12498178 12498654 -238189200 - MER70A LTR ERVL -2 470 1 187 273 189 38 chr2 12499200 12499332 -238188522 + MIR3 SINE MIR 42 193 -15 216 250 18 0 chr2 12499652 12499708 -238188146 + (CACCC)n Simple_repeat Simple_repeat 1 57 0 183 314 86 71 chr2 12499751 12499961 -238187893 + MIR SINE MIR 50 262 0 256 145 16 16 chr2 12501316 12501378 -238186476 + (TA)n Simple_repeat Simple_repeat 2 63 0 304 297 75 82 chr2 12501409 12502052 -238185802 - L1MC/D LINE L1 -470 5651 5266 1330 181 140 16 chr2 12502377 12502742 -238185112 + MER65A LTR ERV1 23 432 -13 596 337 70 22 chr2 12502783 12503338 -238184516 - L1MC/D LINE L1 -1249 4897 4316 735 226 132 116 chr2 12504183 12504699 -238183155 + MLT1F1 LTR MaLR 3 567 0 663 296 47 19 chr2 12505156 12505369 -238182485 + MER58A DNA MER1_type 4 222 -2 362 343 63 38 chr2 12505705 12506020 -238181834 - MLT1H LTR MaLR -198 351 29 2200 143 19 11 chr2 12507389 12507761 -238180093 + THE1C LTR MaLR 1 375 0 332 317 41 0 chr2 12508067 12508190 -238179664 - MIR SINE MIR -48 214 87 938 244 15 29 chr2 12508595 12508869 -238178985 - MLT1C LTR MaLR -194 273 4 185 388 0 15 chr2 12508901 12508968 -238178886 + L3b LINE CR1 1501 1566 -17 249 83 0 0 chr2 12509349 12509385 -238178469 + (TG)n Simple_repeat Simple_repeat 2 37 0 263 390 94 0 chr2 12509811 12509970 -238177884 - MIR SINE MIR -44 218 45 396 40 0 0 chr2 12510069 12510119 -238177735 + (TG)n Simple_repeat Simple_repeat 1 50 0 791 263 87 76 chr2 12510436 12510941 -238176913 - MLT2B3 LTR ERVL -20 534 21 1312 246 25 17 chr2 12510941 12511303 -238176551 + MLT1A1 LTR MaLR 1 365 0 791 263 87 76 chr2 12511303 12511325 -238176529 - MLT2B3 LTR ERVL -533 21 1 425 248 55 0 chr2 12513010 12513119 -238174735 + MIR SINE MIR 89 203 -59 407 76 51 38 chr2 12513119 12513198 -238174656 + L1MB7 LINE L1 6104 6183 -1 180 0 0 0 chr2 12513893 12513913 -238173941 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2327 67 0 7 chr2 12514485 12514802 -238173052 + AluY SINE Alu 3 311 0 236 336 69 0 chr2 12514887 12515018 -238172836 - MIR SINE MIR -42 220 81 199 166 178 0 chr2 12515276 12515332 -238172522 - MIR SINE MIR -65 143 84 333 82 0 0 chr2 12515431 12515480 -238172374 + (TATAG)n Simple_repeat Simple_repeat 2 50 0 1120 300 58 33 chr2 12516155 12516851 -238171003 + HAL1 LINE L1 1482 2194 -313 316 216 5 146 chr2 12516852 12517037 -238170817 + HAL1 LINE L1 2324 2482 -25 26 64 0 0 chr2 12518267 12518314 -238169540 + AT_rich Low_complexity Low_complexity 1 47 0 180 323 20 50 chr2 12518644 12518743 -238169111 - MIR SINE MIR -92 116 21 1337 228 0 0 chr2 12518926 12519194 -238168660 + MLT1A1 LTR MaLR 1 268 -97 4328 82 39 3 chr2 12519505 12520129 -238167725 - L1P LINE L1 -1726 4420 3775 187 306 97 0 chr2 12520292 12520354 -238167500 - L2 LINE L2 -89 3183 3116 1805 156 26 0 chr2 12520362 12520664 -238167190 + AluSx SINE Alu 1 310 -2 700 198 0 11 chr2 12520992 12521174 -238166680 + GA-rich Low_complexity Low_complexity 1 180 0 266 333 68 14 chr2 12524872 12525094 -238162760 + L1ME LINE L1 4553 4786 -1360 1872 155 137 11 chr2 12525277 12525657 -238162197 + MSTA LTR MaLR 1 428 0 8619 156 16 36 chr2 12525659 12527266 -238160588 + MSTA-int LTR MaLR 3 1576 -4 1976 146 125 18 chr2 12527270 12527655 -238160199 + MSTA LTR MaLR 1 426 -2 2513 181 42 9 chr2 12527743 12528284 -238159570 - L1PB4 LINE L1 0 6156 5598 378 372 41 11 chr2 12528402 12528770 -238159084 + L1ME LINE L1 5258 5636 -526 451 366 71 17 chr2 12528805 12529100 -238158754 - L2 LINE L2 -8 3305 2995 826 300 63 101 chr2 12529138 12530024 -238157830 - L2 LINE L2 -420 2894 2042 31 88 0 0 chr2 12530502 12530582 -238157272 + AT_rich Low_complexity Low_complexity 1 80 0 2215 198 15 22 chr2 12530735 12531195 -238156659 + MSTB2 LTR MaLR 1 457 0 2488 205 71 79 chr2 12531195 12531969 -238155885 + MSTB2-int LTR MaLR 2 769 -882 1028 208 0 0 chr2 12531969 12532166 -238155688 + MLT1A1 LTR MaLR 261 457 0 229 320 95 0 chr2 12532391 12532538 -238155316 + L1ME LINE L1 5651 5811 -310 40 37 0 0 chr2 12532592 12532646 -238155208 + AT_rich Low_complexity Low_complexity 1 54 0 840 182 72 8 chr2 12533219 12533455 -238154399 - MER33 DNA MER1_type -19 305 55 1621 189 34 10 chr2 12533523 12533820 -238154034 - AluJb SINE Alu -8 304 1 264 235 44 81 chr2 12533821 12533957 -238153897 - MER104 DNA Tc2 -42 138 8 342 333 60 51 chr2 12534159 12534393 -238153461 - MLT1K LTR MaLR -234 354 119 326 279 0 74 chr2 12536251 12536373 -238151481 + MER74B LTR ERVL 70 182 -440 272 24 0 48 chr2 12536381 12536423 -238151431 + (TTA)n Simple_repeat Simple_repeat 3 42 0 7016 40 0 11 chr2 12536423 12537284 -238150570 - L1PA5 LINE L1 -18 6136 5285 366 285 44 44 chr2 12537287 12537424 -238150430 + MER74B LTR ERVL 380 516 -106 25 0 0 0 chr2 12537576 12537601 -238150253 + AT_rich Low_complexity Low_complexity 1 25 0 297 241 46 11 chr2 12537874 12537961 -238149893 + MLT1J2 LTR MaLR 66 155 -295 1690 252 65 55 chr2 12538166 12539109 -238148745 - L1MC5 LINE L1 -55 7906 6955 1529 246 56 27 chr2 12539318 12539797 -238148057 - L1MC5 LINE L1 -2007 5801 5309 28 29 0 0 chr2 12540188 12540223 -238147631 + AT_rich Low_complexity Low_complexity 1 35 0 2132 183 44 12 chr2 12541334 12541739 -238146115 - MER47B DNA MER2_type 0 418 1 2626 38 0 10 chr2 12542127 12542441 -238145413 - AluY SINE Alu 0 311 1 29 28 0 0 chr2 12542441 12542477 -238145377 + AT_rich Low_complexity Low_complexity 1 36 0 387 231 56 50 chr2 12542530 12542690 -238145164 - L1MC5 LINE L1 -1465 4681 4521 277 276 172 5 chr2 12542781 12542984 -238144870 + L1M4 LINE L1 3515 3751 -2395 593 156 0 0 chr2 12542984 12543074 -238144780 + 7SLRNA srpRNA srpRNA 213 302 -18 198 0 0 0 chr2 12543074 12543096 -238144758 + (TAA)n Simple_repeat Simple_repeat 2 23 0 271 261 93 35 chr2 12543104 12543414 -238144440 + L1M4 LINE L1 3760 4087 -2059 745 249 31 55 chr2 12543442 12543823 -238144031 + L1M4 LINE L1 4222 4593 -1553 191 233 23 0 chr2 12544628 12544671 -238143183 + MER5A DNA MER1_type 111 154 -35 23 33 0 0 chr2 12544671 12544701 -238143153 + AT_rich Low_complexity Low_complexity 1 30 0 269 321 42 71 chr2 12545191 12545359 -238142495 - MIR3 SINE MIR -43 165 3 186 43 0 0 chr2 12545648 12545671 -238142183 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 428 135 34 0 chr2 12545674 12545763 -238142091 - L1MA7 LINE L1 -2 6289 6198 411 83 0 0 chr2 12546399 12546459 -238141395 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 619 337 108 28 chr2 12546459 12547589 -238140265 + L1ME3A LINE L1 4143 5392 -770 2207 120 0 0 chr2 12547589 12547889 -238139965 - AluSq SINE Alu -13 300 1 619 337 108 28 chr2 12547889 12547986 -238139868 + L1ME3A LINE L1 5392 5480 -682 245 353 73 10 chr2 12548156 12548445 -238139409 + L1ME3A LINE L1 5645 5951 -219 180 0 0 0 chr2 12550256 12550276 -238137578 + (TTAA)n Simple_repeat Simple_repeat 4 23 0 772 293 67 62 chr2 12550305 12550906 -238136948 - L2 LINE L2 0 3313 2723 180 174 0 87 chr2 12551517 12551563 -238136291 - MIR SINE MIR -10 252 211 1395 201 119 49 chr2 12553310 12553782 -238134072 - MLT1D LTR MaLR 0 505 1 435 282 28 93 chr2 12554171 12554462 -238133392 - L2 LINE L2 -79 3234 2963 230 288 76 30 chr2 12555485 12555551 -238132303 + L2 LINE L2 3197 3265 -48 313 350 21 21 chr2 12556090 12556233 -238131621 - MIR SINE MIR -100 162 20 204 260 57 8 chr2 12556760 12556852 -238131002 - MIR SINE MIR -62 146 52 2148 109 20 0 chr2 12557099 12557403 -238130451 + AluSp SINE Alu 1 310 -3 301 369 95 5 chr2 12557666 12557888 -238129966 + MIR SINE MIR 6 247 -15 289 351 16 16 chr2 12558081 12558323 -238129531 + L1MEc LINE L1 36 277 -6119 1955 125 4 0 chr2 12558724 12558996 -238128858 + AluSx SINE Alu 3 275 -37 235 0 0 54 chr2 12559000 12559037 -238128817 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 479 234 24 102 chr2 12559222 12559556 -238128298 + L1MEc LINE L1 825 1132 -5073 1331 150 87 113 chr2 12559777 12560237 -238127617 - LTR7 LTR ERV1 -2 448 1 2362 95 48 13 chr2 12560237 12560616 -238127238 - HERVH LTR ERV1 0 7713 7322 1391 123 18 14 chr2 12560614 12560833 -238127021 - HERVH LTR ERV1 -1894 5819 5600 * 2422 143 38 0 chr2 12560834 12561227 -238126627 - HERVH LTR ERV1 -2564 5149 4742 1138 137 16 0 chr2 12561276 12561466 -238126388 - HERVH LTR ERV1 -4726 2987 2795 * 1685 100 59 0 chr2 12561464 12561703 -238126151 - HERVH LTR ERV1 -2973 4740 4488 3239 122 8 6 chr2 12561705 12562206 -238125648 - HERVH LTR ERV1 -3720 3993 3492 947 133 7 0 chr2 12562196 12562346 -238125508 - HERVH LTR ERV1 -4423 3290 3140 * 19960 102 21 5 chr2 12562340 12565280 -238122574 - HERVH LTR ERV1 -4726 2987 1 1272 145 95 124 chr2 12565282 12565743 -238122111 - LTR7 LTR ERV1 -2 448 1 233 0 62 0 chr2 12566413 12566445 -238121409 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1395 244 7 3 chr2 12566728 12567023 -238120831 + MLT2B1 LTR ERVL 1 296 -224 193 236 214 22 chr2 12567105 12567194 -238120660 - MIR SINE MIR -85 177 72 4032 297 78 49 chr2 12568528 12570351 -238117503 - L1ME2 LINE L1 -304 6655 4887 252 100 183 0 chr2 12570351 12570411 -238117443 + LTR52 LTR ERVL 19 89 -332 4032 297 78 49 chr2 12570411 12571240 -238116614 - L1ME2 LINE L1 -2072 4887 4084 2110 210 92 76 chr2 12571240 12572053 -238115801 - LTR1B LTR ERV1 0 826 1 4032 297 78 49 chr2 12572053 12572528 -238115326 - L1ME2 LINE L1 -2875 4084 3624 1799 161 58 19 chr2 12572528 12572889 -238114965 - THE1C LTR MaLR 0 375 1 9126 131 38 40 chr2 12572889 12574472 -238113382 - THE1C-int LTR MaLR 0 1580 2 1893 140 80 11 chr2 12574473 12574824 -238113030 - THE1C LTR MaLR 0 375 1 4032 297 78 49 chr2 12574824 12575187 -238112667 - L1ME2 LINE L1 -3334 3625 2998 927 279 49 21 chr2 12575188 12575615 -238112239 - L1ME2 LINE L1 -4125 2997 2559 320 218 50 30 chr2 12575797 12575898 -238111956 - L1ME2 LINE L1 -5159 1264 1162 624 342 47 4 chr2 12576542 12576776 -238111078 - HERVL40 LTR ERVL -1738 3792 3549 424 303 60 60 chr2 12578020 12578334 -238109520 - REP3 LTR ERV -54 508 195 1303 271 86 14 chr2 12578789 12579287 -238108567 - MLT1E1 LTR MaLR -114 540 7 318 298 19 10 chr2 12579699 12579803 -238108051 + MIR3 SINE MIR 89 193 -15 339 360 30 35 chr2 12580686 12580886 -238106968 + MIR SINE MIR 49 247 -15 229 286 21 83 chr2 12580979 12581171 -238106683 - REP3 LTR ERV -218 344 165 643 345 84 35 chr2 12582465 12583169 -238104685 + HAL1b LINE L1 62 799 -549 261 392 40 8 chr2 12583403 12583528 -238104326 + MER5A DNA MER1_type 52 180 -9 833 231 0 0 chr2 12584132 12584292 -238103562 + AluJb SINE Alu 129 288 -24 999 203 5 15 chr2 12585408 12585610 -238102244 - AluJo SINE Alu -19 293 94 201 311 58 29 chr2 12586690 12586793 -238101061 - L2 LINE L2 -160 3112 3007 366 42 0 0 chr2 12586861 12586909 -238100945 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1355 48 0 0 chr2 12586921 12587088 -238100766 - L1PA4 LINE L1 -8 6147 5981 428 245 20 10 chr2 12587131 12587229 -238100625 - MER81 DNA DNA -1 113 15 734 232 80 77 chr2 12587258 12587620 -238100234 - MLT1F1 LTR MaLR -140 427 65 1793 155 3 23 chr2 12587850 12588153 -238099701 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 12588308 12588330 -238099524 + AT_rich Low_complexity Low_complexity 1 22 0 1206 186 122 32 chr2 12588749 12589060 -238098794 - MER44D DNA MER2_type 0 609 1 590 243 59 76 chr2 12589265 12589602 -238098252 + MER57A LTR ERV1 103 403 0 244 300 0 0 chr2 12589932 12590002 -238097852 - MIR SINE MIR -114 148 79 224 291 78 15 chr2 12590857 12590980 -238096874 - MIR SINE MIR -63 145 34 22 56 0 0 chr2 12591604 12591640 -238096214 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr2 12592134 12592157 -238095697 + (TG)n Simple_repeat Simple_repeat 2 24 0 190 372 64 0 chr2 12593017 12593111 -238094743 + L2 LINE L2 2175 2274 -1040 1432 108 78 13 chr2 12593241 12593473 -238094381 - L1PA13 LINE L1 -3 6160 5914 212 197 0 30 chr2 12594850 12594916 -238092938 + (TGAA)n Simple_repeat Simple_repeat 2 65 0 431 293 98 76 chr2 12597103 12597552 -238090302 + L1ME LINE L1 536 1015 -5055 1929 161 16 16 chr2 12597552 12597925 -238089929 - THE1C LTR MaLR -2 373 1 431 293 98 76 chr2 12597925 12598061 -238089793 + L1ME LINE L1 1015 1146 -4924 2188 113 0 10 chr2 12598465 12598775 -238089079 + AluSx SINE Alu 1 307 -5 496 242 11 68 chr2 12598865 12599055 -238088799 + L1MA9 LINE L1 6093 6271 -41 226 309 72 28 chr2 12599167 12599348 -238088506 + L1ME LINE L1 2312 2500 -3580 920 140 7 33 chr2 12599377 12599527 -238088327 + Tigger3(Golem) DNA MER2_type 2886 3031 0 1034 292 71 38 chr2 12599536 12600378 -238087476 - L1M4 LINE L1 -778 5368 4499 340 301 99 40 chr2 12600420 12600825 -238087029 - L1M4 LINE L1 -1838 4308 3880 2400 117 96 0 chr2 12600856 12601240 -238086614 + MSTA LTR MaLR 1 421 -7 8824 178 36 13 chr2 12601248 12602671 -238085183 + MSTA-int LTR MaLR 2 1469 -182 1993 129 0 7 chr2 12602671 12602994 -238084860 + AluSx SINE Alu 1 321 0 8824 178 36 13 chr2 12602994 12603177 -238084677 + MSTA-int LTR MaLR 1469 1646 -5 1873 157 144 5 chr2 12603183 12603558 -238084296 + MSTA LTR MaLR 1 427 -1 251 276 43 26 chr2 12603770 12603886 -238083968 - L1M4 LINE L1 -2532 3614 3497 245 330 18 18 chr2 12604034 12604143 -238083711 - MER81 DNA DNA -5 109 1 22 0 0 0 chr2 12604255 12604277 -238083577 + AT_rich Low_complexity Low_complexity 1 22 0 227 309 41 0 chr2 12604411 12604508 -238083346 + HAL1b LINE L1 261 361 -987 374 300 122 15 chr2 12604522 12604792 -238083062 + L1ME4a LINE L1 4549 4847 -1299 1068 267 92 101 chr2 12604859 12606099 -238081755 + L1MC4 LINE L1 6809 8037 -5 372 287 38 73 chr2 12606291 12606504 -238081350 + L1ME4a LINE L1 5629 5829 -333 12729 150 59 4 chr2 12606504 12608797 -238079057 + Tigger1 DNA MER2_type 1 2418 0 372 287 38 73 chr2 12608797 12608900 -238078954 + L1ME4a LINE L1 5829 5934 -228 772 273 64 93 chr2 12609142 12609788 -238078066 + MLT1G LTR MaLR 4 590 0 2124 142 14 19 chr2 12610149 12610515 -238077339 - THE1B LTR MaLR 0 364 1 11089 112 10 2 chr2 12610517 12612079 -238075775 - THE1B-int LTR MaLR -5 1575 1 2166 148 3 27 chr2 12612079 12612452 -238075402 - THE1B LTR MaLR 0 364 1 31 88 0 0 chr2 12612643 12612723 -238075131 + AT_rich Low_complexity Low_complexity 1 80 0 31 0 0 0 chr2 12612817 12612848 -238075006 + AT_rich Low_complexity Low_complexity 1 31 0 243 277 39 23 chr2 12612987 12613117 -238074737 + L1ME4a LINE L1 5969 6100 -21 1523 143 4 4 chr2 12613179 12613431 -238074423 - AluSq SINE Alu 0 307 56 483 309 43 35 chr2 12613555 12613811 -238074043 - MIR SINE MIR 0 262 5 246 291 93 23 chr2 12613818 12613904 -238073950 + L2 LINE L2 3220 3311 -2 1929 172 48 54 chr2 12614669 12615310 -238072544 + Tigger3(Golem) DNA MER2_type 1 3027 -2 327 96 0 0 chr2 12616615 12616667 -238071187 + (CA)n Simple_repeat Simple_repeat 2 53 0 413 328 95 12 chr2 12616858 12617099 -238070755 + MIR SINE MIR 2 262 0 198 0 0 0 chr2 12619393 12619415 -238068439 + (T)n Simple_repeat Simple_repeat 1 22 0 198 0 0 0 chr2 12620434 12620456 -238067398 + (T)n Simple_repeat Simple_repeat 1 22 0 417 54 0 0 chr2 12621029 12621085 -238066769 + (CA)n Simple_repeat Simple_repeat 2 57 0 437 275 30 8 chr2 12621137 12621268 -238066586 + MIR SINE MIR 11 144 -118 569 81 79 3 chr2 12622084 12622408 -238065446 + (TA)n Simple_repeat Simple_repeat 1 348 0 234 346 13 13 chr2 12623446 12623524 -238064330 - MER5A DNA MER1_type -104 85 8 229 0 83 0 chr2 12624075 12624111 -238063743 + T-rich Low_complexity Low_complexity 2 40 0 909 166 0 0 chr2 12624113 12624258 -238063596 - AluJb SINE Alu -31 281 137 274 254 0 17 chr2 12624263 12624322 -238063532 - AluS SINE Alu -241 61 4 624 14 0 0 chr2 12624502 12624575 -238063279 + (CA)n Simple_repeat Simple_repeat 1 73 0 1464 218 124 47 chr2 12624621 12625345 -238062509 - LTR1B LTR ERV1 0 826 7 553 333 27 18 chr2 12626158 12626383 -238061471 + MIR SINE MIR 8 234 -28 187 371 82 44 chr2 12627013 12627307 -238060547 - L2 LINE L2 -607 2707 2403 188 135 27 0 chr2 12627878 12627915 -238059939 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 317 269 70 39 chr2 12628237 12628393 -238059461 - L1MC4a LINE L1 -1878 5930 5770 310 224 41 15 chr2 12628675 12628874 -238058980 + L1ME LINE L1 5265 5505 -661 476 281 27 32 chr2 12628874 12629095 -238058759 + L1MC4 LINE L1 6824 7043 -999 2084 84 29 3 chr2 12629366 12629676 -238058178 + L1PA13 LINE L1 5846 6163 0 612 234 122 70 chr2 12629769 12630135 -238057719 + MLT1D LTR MaLR 27 419 -48 409 261 141 29 chr2 12630338 12630644 -238057210 + L1M4 LINE L1 3635 3974 -2172 382 22 0 0 chr2 12631305 12631351 -238056503 - MADE1 DNA Mariner -34 46 1 331 315 82 14 chr2 12631400 12631546 -238056308 - MLT1K LTR MaLR -371 217 62 289 298 36 41 chr2 12632164 12632287 -238055567 - MIR SINE MIR -37 171 49 553 289 0 0 chr2 12632291 12632419 -238055435 - Tigger1 DNA MER2_type 0 2418 2291 3650 150 38 42 chr2 12632520 12632814 -238055040 - Tigger1 DNA MER2_type -671 1747 1453 7226 33 0 0 chr2 12632814 12634021 -238053833 - L1PA4 LINE L1 -1 6154 4989 3650 150 38 42 chr2 12634021 12634378 -238053476 - Tigger1 DNA MER2_type -965 1453 1097 2398 122 14 3 chr2 12634378 12634738 -238053116 - THE1B LTR MaLR 0 364 1 3650 150 38 42 chr2 12634738 12634767 -238053087 - Tigger1 DNA MER2_type -1321 1097 1069 3692 110 30 11 chr2 12634775 12635287 -238052567 - L1PA11 LINE L1 0 6174 5648 2106 142 19 27 chr2 12635287 12635654 -238052200 - THE1B LTR MaLR 0 364 1 3692 110 30 11 chr2 12635654 12635712 -238052142 - L1PA11 LINE L1 -526 5648 5593 4738 180 46 8 chr2 12635712 12636596 -238051258 - Tigger1 DNA MER2_type -1500 918 1 217 219 0 0 chr2 12636906 12636947 -238050907 + (TG)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 12637230 12637255 -238050599 + AT_rich Low_complexity Low_complexity 1 25 0 313 228 13 0 chr2 12638774 12638853 -238049001 - MER116 DNA Mariner 0 80 1 415 277 66 52 chr2 12639832 12640079 -238047775 + MIR SINE MIR 5 249 -13 341 286 16 87 chr2 12640490 12640675 -238047179 + MIR SINE MIR 49 220 -42 202 301 30 66 chr2 12640865 12641031 -238046823 - L2 LINE L2 -44 3269 3110 386 234 43 58 chr2 12641180 12641368 -238046486 - MER53 DNA DNA -3 186 2 336 303 38 54 chr2 12641386 12641571 -238046283 + MIR3 SINE MIR 15 196 -12 2229 105 0 7 chr2 12641736 12642042 -238045812 - AluSx SINE Alu -8 304 1 22 0 0 0 chr2 12642258 12642280 -238045574 + AT_rich Low_complexity Low_complexity 1 22 0 987 260 110 7 chr2 12643271 12643571 -238044283 + MER58B DNA MER1_type 11 341 0 260 342 140 0 chr2 12644298 12644412 -238043442 - MIR SINE MIR -118 144 15 2180 260 112 27 chr2 12645564 12647900 -238039954 - L1ME1 LINE L1 -64 6913 4323 300 262 43 43 chr2 12647985 12648149 -238039705 - L1ME1 LINE L1 -2744 4213 4050 343 293 137 51 chr2 12648249 12648505 -238039349 - L1ME1 LINE L1 -6563 296 19 327 366 58 25 chr2 12648901 12649177 -238038677 + MLT1J LTR MaLR 97 381 -130 686 297 20 60 chr2 12650316 12650565 -238037289 + MIR SINE MIR 3 241 -21 279 0 0 0 chr2 12650968 12650999 -238036855 + (CA)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr2 12651932 12651960 -238035894 + AT_rich Low_complexity Low_complexity 1 28 0 227 386 96 56 chr2 12652265 12652589 -238035265 + L2 LINE L2 2917 3253 -19 303 333 200 21 chr2 12652887 12653127 -238034727 + L3 LINE CR1 1246 1528 -49 4651 194 93 17 chr2 12653948 12655298 -238032556 - L1MC1 LINE L1 -14 6319 4865 187 150 33 0 chr2 12655306 12655366 -238032488 + (TA)n Simple_repeat Simple_repeat 1 62 0 258 122 0 0 chr2 12655369 12655410 -238032444 - Alu SINE Alu -12 288 248 41 48 0 0 chr2 12655410 12655472 -238032382 + AT_rich Low_complexity Low_complexity 1 62 0 585 234 7 13 chr2 12655493 12655647 -238032207 - L1MC1 LINE L1 -1304 4842 4690 201 359 0 26 chr2 12655927 12656044 -238031810 + CT-rich Low_complexity Low_complexity 3 116 0 636 335 72 3 chr2 12656115 12656422 -238031432 + LTR16A LTR ERVL 123 450 0 1962 326 57 23 chr2 12656517 12657521 -238030333 + HERV16 LTR ERVL 114 1151 -3845 819 295 36 13 chr2 12657568 12657873 -238029981 + L1MEc LINE L1 108 419 -5977 346 319 22 0 chr2 12657931 12658066 -238029788 + L1MEc LINE L1 1936 2073 -4323 423 293 140 22 chr2 12658657 12658879 -238028975 + MIR SINE MIR 5 252 -10 25 0 0 0 chr2 12659297 12659322 -238028532 + AT_rich Low_complexity Low_complexity 1 25 0 401 234 22 135 chr2 12659360 12659672 -238028182 + L1MC4 LINE L1 7763 8039 -3 711 288 29 4 chr2 12660355 12660633 -238027221 - L1MEc LINE L1 -5487 909 625 607 342 27 45 chr2 12660654 12661028 -238026826 - L1MEc LINE L1 -5992 404 38 604 309 141 49 chr2 12661035 12661482 -238026372 + L2 LINE L2 2108 2595 -719 380 343 131 21 chr2 12661484 12662030 -238025824 + L2 LINE L2 2707 3313 0 2273 81 7 3 chr2 12662106 12662402 -238025452 + AluSq SINE Alu 1 297 -16 258 32 0 0 chr2 12662408 12662439 -238025415 + (TA)n Simple_repeat Simple_repeat 2 32 0 36 0 0 0 chr2 12662621 12662657 -238025197 + AT_rich Low_complexity Low_complexity 1 36 0 2954 170 113 0 chr2 12662668 12663269 -238024585 + LTR51 LTR ERV1 3 671 0 2091 167 5 11 chr2 12663901 12664278 -238023576 + THE1C LTR MaLR 1 375 0 357 287 85 8 chr2 12664408 12664537 -238023317 + MIR SINE MIR 110 248 -14 315 0 0 0 chr2 12664547 12664582 -238023272 + (TG)n Simple_repeat Simple_repeat 2 36 0 341 277 34 8 chr2 12664961 12665080 -238022774 - L2 LINE L2 0 3313 3192 21 0 0 0 chr2 12665263 12665284 -238022570 + AT_rich Low_complexity Low_complexity 1 21 0 241 316 165 8 chr2 12666494 12666627 -238021227 - L2 LINE L2 0 3313 3160 2018 249 55 32 chr2 12666645 12667881 -238019973 - L1ME2 LINE L1 -169 5995 4735 212 57 0 29 chr2 12667953 12667988 -238019866 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 13492 26 2 1 chr2 12667988 12670336 -238017518 - L1PA3 LINE L1 -24 6131 3782 938 267 62 31 chr2 12670341 12670629 -238017225 - MLT1E LTR MaLR -296 297 1 25 0 0 0 chr2 12670903 12670928 -238016926 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 12670945 12670974 -238016880 + AT_rich Low_complexity Low_complexity 1 29 0 279 0 0 0 chr2 12671906 12671937 -238015917 + (CA)n Simple_repeat Simple_repeat 2 32 0 438 79 0 0 chr2 12672154 12672217 -238015637 + (TG)n Simple_repeat Simple_repeat 2 64 0 1606 204 28 6 chr2 12672226 12672583 -238015271 - MLT1A1 LTR MaLR 0 365 1 1776 167 10 10 chr2 12673911 12674223 -238013631 - AluJo SINE Alu 0 312 1 485 243 0 0 chr2 12674489 12674600 -238013254 - L1MA9 LINE L1 -24 6288 6178 222 327 89 23 chr2 12675237 12675451 -238012403 - L2 LINE L2 -385 2929 2702 672 231 0 0 chr2 12675873 12676007 -238011847 + AluJo SINE Alu 1 134 -178 404 317 96 46 chr2 12676215 12676518 -238011336 - HERV16 LTR ERVL -4064 932 615 2275 104 0 0 chr2 12676552 12676859 -238010995 - AluSx SINE Alu -5 307 1 623 305 98 50 chr2 12677389 12677786 -238010068 - LTR16A LTR ERVL -4 446 31 22 56 0 0 chr2 12677931 12677967 -238009887 + AT_rich Low_complexity Low_complexity 1 36 0 975 140 6 12 chr2 12678370 12678534 -238009320 + L1PA10 LINE L1 6006 6168 0 292 378 55 8 chr2 12679048 12679175 -238008679 - L2 LINE L2 -22 3250 3118 27 29 0 0 chr2 12679816 12679850 -238008004 + AT_rich Low_complexity Low_complexity 1 34 0 582 297 18 32 chr2 12679965 12680184 -238007670 + L2 LINE L2 2270 2485 -829 2610 186 38 39 chr2 12681649 12682284 -238005570 - LTR27 LTR ERV1 0 636 3 307 364 91 0 chr2 12682360 12682525 -238005329 + MIR SINE MIR 9 188 -74 180 283 21 103 chr2 12683300 12683445 -238004409 + L2 LINE L2 3171 3303 -10 32 57 0 0 chr2 12683769 12683822 -238004032 + AT_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr2 12683934 12683969 -238003885 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 12683991 12684107 -238003747 + (TA)n Simple_repeat Simple_repeat 1 118 0 23 0 0 0 chr2 12684363 12684386 -238003468 + AT_rich Low_complexity Low_complexity 1 23 0 314 45 23 0 chr2 12684471 12684515 -238003339 + (CA)n Simple_repeat Simple_repeat 2 46 0 589 294 24 48 chr2 12684673 12685003 -238002851 - MER90 LTR ERV1 0 575 254 750 166 13 0 chr2 12685003 12685217 -238002637 - L1P LINE L1 -743 5403 5203 180 0 0 0 chr2 12685217 12685237 -238002617 + (TC)n Simple_repeat Simple_repeat 1 20 0 1008 124 0 0 chr2 12685238 12685416 -238002438 + (TA)n Simple_repeat Simple_repeat 2 179 0 389 198 0 62 chr2 12685448 12685544 -238002310 - L1MC4 LINE L1 -1339 6703 6614 2589 221 7 5 chr2 12685573 12686170 -238001684 - L1P LINE L1 -970 5176 4579 4001 175 16 1 chr2 12686171 12686907 -238000947 + L1PA16 LINE L1 5411 6157 -9 180 152 0 0 chr2 12686953 12686986 -238000868 + (TG)n Simple_repeat Simple_repeat 2 34 0 1036 246 33 30 chr2 12687096 12687397 -238000457 - MER90 LTR ERV1 -311 303 2 252 235 62 37 chr2 12687712 12687793 -238000061 - MER21B LTR ERV1 -271 592 510 1152 132 3 11 chr2 12687900 12688855 -237998999 - HSATII Satellite Satellite 0 947 1 879 125 25 23 chr2 12688894 12689275 -237998579 - HSATII Satellite Satellite -63 381 1 888 139 14 8 chr2 12689381 12690564 -237997290 - HSATII Satellite Satellite -22 1189 1 24 0 0 0 chr2 12690814 12690838 -237997016 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 12690953 12690988 -237996866 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 12691010 12691126 -237996728 + (TA)n Simple_repeat Simple_repeat 1 118 0 314 45 23 0 chr2 12691490 12691534 -237996320 + (CA)n Simple_repeat Simple_repeat 2 46 0 654 226 31 0 chr2 12694410 12694561 -237993293 + MLT1B LTR MaLR 3 158 -232 1181 159 50 43 chr2 12694561 12694819 -237993035 - THE1C LTR MaLR 0 375 116 473 303 48 5 chr2 12694929 12695117 -237992737 + MLT1B LTR MaLR 208 403 -64 221 167 21 0 chr2 12695135 12695183 -237992671 + MER5C DNA MER1_type 270 318 -6 368 291 119 8 chr2 12695658 12695792 -237992062 - MIR SINE MIR -99 163 15 372 125 0 0 chr2 12696622 12696686 -237991168 - HSATII Satellite Satellite -106 64 1 1172 118 8 10 chr2 12696711 12698661 -237989193 - HSATII Satellite Satellite -1 1946 1 1248 116 11 3 chr2 12698676 12699531 -237988323 - HSATII Satellite Satellite -99 861 1 958 121 16 18 chr2 12699562 12700942 -237986912 - HSATII Satellite Satellite -5 1376 1 1131 122 8 8 chr2 12700962 12703317 -237984537 - HSATII Satellite Satellite 0 2354 1 1017 122 6 9 chr2 12703454 12704530 -237983324 - HSATII Satellite Satellite -40 1072 1 1000 102 14 21 chr2 12704561 12704979 -237982875 - HSATII Satellite Satellite 0 415 1 1002 128 14 15 chr2 12705005 12706249 -237981605 - HSATII Satellite Satellite 0 1243 1 1001 122 4 12 chr2 12706365 12707455 -237980399 - HSATII Satellite Satellite -1 1080 1 975 108 18 25 chr2 12707490 12708197 -237979657 - HSATII Satellite Satellite -1 701 1 628 320 61 16 chr2 12708670 12708917 -237978937 + MIR SINE MIR 2 259 -3 458 319 94 19 chr2 12709421 12709888 -237977966 - L1MCa LINE L1 -5145 1281 780 346 365 7 34 chr2 12710210 12710358 -237977496 + MIR SINE MIR 29 172 -90 253 330 50 10 chr2 12711352 12711452 -237976402 - MIR SINE MIR -111 151 48 333 23 0 0 chr2 12712108 12712152 -237975702 - L1PA3 LINE L1 0 6155 6112 197 328 86 26 chr2 12712176 12712292 -237975562 + MIR SINE MIR 20 142 -66 853 271 18 5 chr2 12712345 12712566 -237975288 + MER58A DNA MER1_type 1 224 0 335 233 0 0 chr2 12712578 12712651 -237975203 - MIR SINE MIR -67 195 123 1828 153 19 0 chr2 12712751 12713059 -237974795 - THE1C-int LTR MaLR -1264 316 3 1739 188 32 24 chr2 12713061 12713433 -237974421 - THE1C LTR MaLR 0 375 1 5300 130 33 17 chr2 12713434 12714485 -237973369 + L1M1 LINE L1 2696 3763 -3802 262 207 0 37 chr2 12714485 12714567 -237973287 + (TA)n Simple_repeat Simple_repeat 1 79 0 180 395 37 12 chr2 12714884 12714965 -237972889 + L2 LINE L2 3168 3250 -22 22 0 0 0 chr2 12715563 12715585 -237972269 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr2 12715910 12715938 -237971916 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 12716505 12716526 -237971328 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 12717188 12717213 -237970641 + AT_rich Low_complexity Low_complexity 1 25 0 220 364 57 0 chr2 12717385 12717473 -237970381 + L2 LINE L2 3171 3263 -9 322 304 39 10 chr2 12718370 12718472 -237969382 + MIR SINE MIR 25 129 -79 359 326 21 14 chr2 12718723 12718864 -237968990 - MLT-int LTR MaLR -1212 523 382 376 195 33 60 chr2 12719066 12719201 -237968653 - MLT1H1 LTR MaLR -24 531 423 274 296 42 78 chr2 12719388 12719585 -237968269 - MLT1H1 LTR MaLR -361 194 1 10418 186 25 10 chr2 12719774 12721720 -237966134 + L1M1 LINE L1 725 2698 -4867 1857 155 41 30 chr2 12721721 12722088 -237965766 - THE1C LTR MaLR -2 373 3 2594 113 0 13 chr2 12722090 12722470 -237965384 - THE1C-int LTR MaLR 0 1580 1206 356 306 57 8 chr2 12722949 12723073 -237964781 + L2 LINE L2 3141 3270 -2 279 0 0 0 chr2 12723913 12723944 -237963910 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 299 15 15 chr2 12724180 12724247 -237963607 - L2 LINE L2 -5 3308 3242 289 402 26 39 chr2 12724738 12724972 -237962882 - L2 LINE L2 -556 2758 2528 1080 224 55 22 chr2 12725763 12726035 -237961819 - MLT2D LTR ERVL -133 281 1 220 312 64 48 chr2 12727153 12727278 -237960576 - MIR SINE MIR -71 191 65 220 125 18 18 chr2 12727327 12727383 -237960471 + (TA)n Simple_repeat Simple_repeat 2 57 0 1297 212 0 60 chr2 12727398 12727700 -237960154 - AluJb SINE Alu -28 284 1 881 338 65 32 chr2 12728113 12728711 -237959143 - ERVL LTR ERVL -1050 4714 4097 227 58 87 51 chr2 12728841 12728979 -237958875 + (TA)n Simple_repeat Simple_repeat 1 143 0 422 52 31 94 chr2 12728993 12729185 -237958669 + (TA)n Simple_repeat Simple_repeat 1 180 0 254 284 0 0 chr2 12729193 12729281 -237958573 + L1MC4 LINE L1 6616 6703 -1339 235 283 0 22 chr2 12729255 12729347 -237958507 - L1MC4 LINE L1 -1339 6703 6614 * 198 209 0 0 chr2 12729347 12729390 -237958464 + (TA)n Simple_repeat Simple_repeat 2 44 0 227 337 0 0 chr2 12729391 12729480 -237958374 - L1MC4 LINE L1 -1339 6703 6615 219 139 0 0 chr2 12729483 12729519 -237958335 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 317 315 0 0 chr2 12729519 12729608 -237958246 + L1MC4 LINE L1 6615 6703 -1339 311 297 11 0 chr2 12729528 12729619 -237958235 - L1MC4 LINE L1 -1339 6703 6612 * 265 34 85 0 chr2 12729657 12729716 -237958138 + (ATATG)n Simple_repeat Simple_repeat 1 64 0 291 151 40 40 chr2 12729803 12729955 -237957899 + (TA)n Simple_repeat Simple_repeat 2 153 0 5586 223 38 31 chr2 12729960 12730762 -237957092 + L1 LINE L1 2341 3136 -3010 5502 68 3 9 chr2 12730762 12731496 -237956358 + L1PA8 LINE L1 5437 6172 0 5586 223 38 31 chr2 12731496 12732859 -237954995 + L1 LINE L1 3136 4437 -1709 357 135 0 124 chr2 12733321 12733410 -237954444 - MADE1 DNA Mariner 0 80 3 1845 146 0 64 chr2 12733923 12734252 -237953602 - AluSx SINE Alu -2 310 3 25 51 0 0 chr2 12734392 12734431 -237953423 + AT_rich Low_complexity Low_complexity 1 39 0 27 0 0 0 chr2 12734524 12734551 -237953303 + AT_rich Low_complexity Low_complexity 1 27 0 208 260 90 10 chr2 12735537 12735637 -237952217 + MIR3 SINE MIR 98 205 -3 1586 166 3 46 chr2 12735683 12735985 -237951869 + AluJo SINE Alu 7 295 -17 1665 172 33 44 chr2 12736256 12736622 -237951232 - THE1C LTR MaLR 0 375 14 815 243 80 24 chr2 12736748 12737123 -237950731 - MER114 LTR ERV -30 618 223 2410 129 18 36 chr2 12737265 12737708 -237950146 + L1MA2 LINE L1 5859 6293 -11 29 0 0 0 chr2 12737712 12737741 -237950113 + AT_rich Low_complexity Low_complexity 1 29 0 3843 247 59 21 chr2 12737754 12739796 -237948058 - L1MC/D LINE L1 -743 5403 3684 5056 156 50 4 chr2 12739798 12740713 -237947141 - L1MA7 LINE L1 -1 6290 5334 1299 176 88 6 chr2 12740707 12741025 -237946829 + L1MA3 LINE L1 4121 4464 -1682 * 644 184 37 18 chr2 12741841 12742004 -237945850 - L1MA8 LINE L1 -10 6281 6116 22 35 0 0 chr2 12742929 12742958 -237944896 + AT_rich Low_complexity Low_complexity 1 29 0 4085 207 15 15 chr2 12743537 12744339 -237943515 + L1PA16 LINE L1 12 813 -6752 * 5641 152 22 4 chr2 12744336 12745653 -237942201 + L1MA3 LINE L1 4788 6153 -152 5126 179 41 7 chr2 12746083 12748062 -237939792 + L1PA16 LINE L1 5544 7584 -1 254 310 26 0 chr2 12748133 12748246 -237939608 - L2 LINE L2 -630 2684 2569 497 276 41 14 chr2 12748737 12748882 -237938972 + L2 LINE L2 3165 3313 0 423 0 0 0 chr2 12750040 12750087 -237937767 + (TATAA)n Simple_repeat Simple_repeat 3 49 0 463 11 55 83 chr2 12750144 12750515 -237937339 + (TA)n Simple_repeat Simple_repeat 1 360 0 412 198 40 34 chr2 12750518 12750695 -237937159 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 1220 188 4 0 chr2 12750990 12751219 -237936635 + L1P LINE L1 4452 4681 -1465 * 5603 162 22 9 chr2 12751191 12752426 -237935428 + L1MA7 LINE L1 5039 6291 0 353 265 82 55 chr2 12752635 12753046 -237934808 + L1 LINE L1 4059 4482 -1664 1291 259 94 23 chr2 12753361 12754208 -237933646 + L1MDa LINE L1 2394 3305 -3235 2527 233 44 16 chr2 12754323 12755057 -237932797 + L1MB2 LINE L1 4181 4934 -1212 2552 40 7 3 chr2 12756796 12757100 -237930754 - AluY SINE Alu -6 305 1 199 307 134 29 chr2 12757475 12757713 -237930141 - L3 LINE CR1 -177 1400 1138 238 274 137 42 chr2 12758204 12758372 -237929482 + MIR SINE MIR 53 236 -26 243 327 13 61 chr2 12758982 12759148 -237928706 + MIR SINE MIR 50 206 -56 279 79 0 0 chr2 12759412 12759450 -237928404 + (CA)n Simple_repeat Simple_repeat 2 39 0 894 305 4 0 chr2 12759455 12759688 -237928166 + L1ME1 LINE L1 108 341 -6055 618 189 30 0 chr2 12759716 12759848 -237928006 + L1MB2 LINE L1 5666 5801 -382 67 55 0 0 chr2 12759849 12759958 -237927896 + AT_rich Low_complexity Low_complexity 1 109 0 1387 153 38 103 chr2 12759961 12760387 -237927467 + L1MB2 LINE L1 5783 6180 -3 3291 256 66 51 chr2 12760545 12762775 -237925079 + L1ME1 LINE L1 3971 6230 -5 488 282 134 32 chr2 12763980 12764569 -237923285 + L1M4 LINE L1 3713 4361 -1785 348 284 43 49 chr2 12764582 12764744 -237923110 + L1M4 LINE L1 4688 4848 -1298 29 70 0 0 chr2 12764836 12764893 -237922961 + AT_rich Low_complexity Low_complexity 1 57 0 5894 94 15 70 chr2 12764955 12765937 -237921917 - L1PA13 LINE L1 -5 6158 5250 1715 195 0 3 chr2 12765937 12766250 -237921604 - AluSx SINE Alu 0 312 1 5894 94 15 70 chr2 12766250 12766819 -237921035 - L1PA13 LINE L1 -913 5250 4651 323 343 39 6 chr2 12767133 12767311 -237920543 + L1ME LINE L1 4745 4928 -1218 555 246 88 36 chr2 12767629 12767934 -237919920 + L1ME LINE L1 5301 5621 -549 358 283 40 52 chr2 12768451 12768624 -237919230 - HERV16 LTR ERVL -959 4805 4635 1737 197 18 91 chr2 12768657 12768965 -237918889 + MER31B LTR ERV1 5 265 -201 2081 120 55 0 chr2 12768965 12769257 -237918597 - AluSg SINE Alu -2 308 1 1737 197 18 91 chr2 12769257 12769445 -237918409 + MER31B LTR ERV1 265 465 -1 279 105 0 0 chr2 12770245 12770283 -237917571 - L1MC3 LINE L1 -1305 6480 6443 24 0 0 0 chr2 12770360 12770384 -237917470 + AT_rich Low_complexity Low_complexity 1 24 0 245 286 178 16 chr2 12770733 12770918 -237916936 + HAL1b LINE L1 339 553 -795 292 300 80 27 chr2 12771610 12771760 -237916094 + MIR SINE MIR 68 225 -37 1496 322 55 25 chr2 12771938 12772479 -237915375 - HERV16 LTR ERVL -2023 2973 2450 264 59 0 0 chr2 12772479 12772513 -237915341 + (TG)n Simple_repeat Simple_repeat 1 34 0 1496 322 55 25 chr2 12772513 12773810 -237914044 - HERV16 LTR ERVL -2546 2450 962 1887 300 81 28 chr2 12773888 12774689 -237913165 - HERV16 LTR ERVL -4150 846 3 881 249 56 56 chr2 12774751 12775125 -237912729 - MLT1A2 LTR MaLR 0 374 1 286 288 0 0 chr2 12775201 12775267 -237912587 - LTR16A LTR ERVL -321 129 64 744 312 38 16 chr2 12775297 12775611 -237912243 + LTR16A LTR ERVL 120 440 -10 31 44 0 0 chr2 12775635 12775680 -237912174 + AT_rich Low_complexity Low_complexity 1 45 0 363 140 11 65 chr2 12775703 12775796 -237912058 + L1MA5 LINE L1 6213 6300 0 21 36 0 0 chr2 12776267 12776295 -237911559 + AT_rich Low_complexity Low_complexity 1 28 0 537 304 71 29 chr2 12776593 12776833 -237911021 + MIR SINE MIR 2 251 -11 196 398 34 0 chr2 12777054 12777142 -237910712 - MIR SINE MIR -112 150 60 180 0 0 0 chr2 12777946 12777966 -237909888 + (TTG)n Simple_repeat Simple_repeat 2 21 0 324 261 80 0 chr2 12779054 12779142 -237908712 - L1MC4 LINE L1 -1334 6708 6614 318 229 0 62 chr2 12779108 12779204 -237908650 + L1MC4 LINE L1 6614 6703 -1339 * 23236 176 22 22 chr2 12779955 12780672 -237907182 + L1PA10 LINE L1 1 716 -5767 192 40 0 0 chr2 12780672 12780697 -237907157 + (CACAG)n Simple_repeat Simple_repeat 1 25 0 23236 176 22 22 chr2 12780697 12786423 -237901431 + L1PA10 LINE L1 716 6471 -12 3896 132 45 74 chr2 12786588 12787914 -237899940 + pTR5 LTR ERV1 168 2295 -143 256 307 9 163 chr2 12788533 12788748 -237899106 - MER91A DNA MER1_type -1 195 14 228 86 0 0 chr2 12788903 12788938 -237898916 + (CA)n Simple_repeat Simple_repeat 2 36 0 2244 114 0 0 chr2 12788977 12789276 -237898578 - AluSx SINE Alu -11 301 3 983 378 17 19 chr2 12791220 12791807 -237896047 + L1PA16 LINE L1 788 1373 -6201 310 347 0 0 chr2 12791948 12792046 -237895808 + L1PA16 LINE L1 2085 2182 -5399 11807 224 61 14 chr2 12792352 12796561 -237891293 + L1PA16 LINE L1 2252 6769 -835 1485 181 51 40 chr2 12796561 12796932 -237890922 - THE1C LTR MaLR 0 375 1 11807 224 61 14 chr2 12796932 12797810 -237890044 + L1PA16 LINE L1 6769 7604 0 572 276 131 22 chr2 12798267 12798730 -237889124 - MLT1E1 LTR MaLR -1 653 5 237 295 74 66 chr2 12799318 12799459 -237888395 + HAL1 LINE L1 750 888 -1619 324 0 0 0 chr2 12799459 12799495 -237888359 + (TAA)n Simple_repeat Simple_repeat 2 37 0 237 295 74 66 chr2 12799495 12799719 -237888135 + HAL1 LINE L1 888 1118 -1389 449 251 151 59 chr2 12799779 12800137 -237887717 + HAL1b LINE L1 417 807 -541 2038 98 42 3 chr2 12800649 12800935 -237886919 - AluSx SINE Alu -13 299 3 686 171 17 0 chr2 12802062 12802179 -237885675 + FRAM SINE Alu 43 161 -15 4170 168 58 10 chr2 12803178 12804046 -237883808 + L1MC1 LINE L1 5425 6333 0 1033 147 0 43 chr2 12804468 12804652 -237883202 - Tigger2a DNA MER2_type -258 176 1 353 297 67 61 chr2 12804674 12806366 -237881488 + L1ME3A LINE L1 3780 5544 -618 3931 195 53 20 chr2 12806367 12807606 -237880248 + L1MB4 LINE L1 4903 6180 0 306 264 124 0 chr2 12807641 12807762 -237880092 + L1ME3A LINE L1 5561 5696 -474 431 276 103 5 chr2 12807781 12807995 -237879859 + L1ME3A LINE L1 5755 5989 -181 1745 179 30 0 chr2 12808684 12808980 -237878874 + AluJb SINE Alu 3 307 -5 2707 251 24 93 chr2 12808980 12810118 -237877736 - L1P LINE L1 -4028 2118 1060 * 3699 164 94 15 chr2 12810112 12810838 -237877016 + L1PA8 LINE L1 5390 6172 0 22 0 0 0 chr2 12810937 12810959 -237876895 + AT_rich Low_complexity Low_complexity 1 22 0 2046 131 0 10 chr2 12811126 12811417 -237876437 - AluSx SINE Alu -24 288 1 182 340 61 7 chr2 12812657 12812804 -237875050 + MIR SINE MIR 51 205 -57 30 83 0 0 chr2 12813557 12813629 -237874225 + AT_rich Low_complexity Low_complexity 1 72 0 1846 189 87 13 chr2 13013810 13014270 -237673584 + LTR54B LTR ERV1 1 494 -4 281 298 0 10 chr2 13014645 13014749 -237673105 + MER57-int LTR ERV1 389 491 -7046 397 188 6 0 chr2 13014828 13014959 -237672895 + L1PA3 LINE L1 5938 6070 -85 300 228 0 0 chr2 13015157 13015271 -237672583 + C-rich Low_complexity Low_complexity 1 114 0 279 289 9 18 chr2 13015447 13015561 -237672293 + MLT1H LTR MaLR 433 545 -4 346 308 30 8 chr2 13015564 13015697 -237672157 + MER69 DNA AcHobo 299 434 -792 1380 105 0 16 chr2 13015715 13015847 -237672007 + AluSg SINE Alu 3 133 -177 1804 140 19 51 chr2 13015847 13016161 -237671693 + AluSx SINE Alu 1 304 -8 1380 105 0 16 chr2 13016161 13016219 -237671635 + AluSg SINE Alu 133 190 -120 234 0 0 0 chr2 13016272 13016298 -237671556 + (GA)n Simple_repeat Simple_repeat 1 26 0 1784 265 88 43 chr2 13016308 13017252 -237670602 + L1MEc LINE L1 394 1379 -5017 264 293 66 19 chr2 13017465 13017677 -237670177 + L1MEc LINE L1 829 1050 -5346 2377 127 13 8 chr2 13017812 13018198 -237669656 - Harlequin LTR ERV1 -6508 388 1 1546 168 88 131 chr2 13018198 13018710 -237669144 - LTR2B LTR ERV1 0 490 1 425 222 76 41 chr2 13018920 13019091 -237668763 + L1M4 LINE L1 4744 4920 -1226 982 234 65 0 chr2 13019124 13019431 -237668423 + L1M4 LINE L1 4973 5299 -847 315 350 20 20 chr2 13019483 13019729 -237668125 + L1ME1 LINE L1 5898 6143 -23 25 65 0 0 chr2 13019730 13019776 -237668078 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 13019789 13019810 -237668044 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 13019999 13020024 -237667830 + AT_rich Low_complexity Low_complexity 1 25 0 1571 258 92 53 chr2 13020362 13020526 -237667328 + L1ME1 LINE L1 4936 5092 -1074 273 75 0 0 chr2 13020526 13020566 -237667288 + (CA)n Simple_repeat Simple_repeat 1 40 0 1571 258 92 53 chr2 13020566 13020893 -237666961 + L1ME1 LINE L1 5092 5405 -761 1076 222 125 44 chr2 13020893 13021325 -237666529 - MLT1C LTR MaLR 0 467 1 1571 258 92 53 chr2 13021325 13021893 -237665961 + L1ME1 LINE L1 5405 6026 -140 182 234 0 43 chr2 13021954 13022001 -237665853 + L3 LINE CR1 652 696 -881 1872 145 26 40 chr2 13022931 13023311 -237664543 + THE1C LTR MaLR 1 375 0 257 318 11 11 chr2 13024939 13025027 -237662827 + MIR SINE MIR 61 148 -114 256 316 105 0 chr2 13025211 13025306 -237662548 + MIR SINE MIR 126 230 -32 203 265 59 15 chr2 13025989 13026057 -237661797 + MER5B DNA MER1_type 5 75 -103 1553 106 0 55 chr2 13027243 13027479 -237660375 + AluSq SINE Alu 78 300 -13 1756 179 69 45 chr2 13027694 13028112 -237659742 - MSTC LTR MaLR 0 428 1 22 0 0 0 chr2 13028659 13028681 -237659173 + AT_rich Low_complexity Low_complexity 1 22 0 316 237 0 0 chr2 13028712 13028771 -237659083 + MER20 DNA MER1_type 1 59 -160 637 226 45 0 chr2 13028813 13028968 -237658886 + MER20 DNA MER1_type 55 216 -3 293 261 70 63 chr2 13028984 13029126 -237658728 - MIR SINE MIR -59 203 61 289 93 37 0 chr2 13029226 13029280 -237658574 + (TA)n Simple_repeat Simple_repeat 1 56 0 549 284 10 18 chr2 13029284 13029447 -237658407 - MLT2B1 LTR ERVL -87 433 228 1749 154 53 56 chr2 13029455 13029646 -237658208 - THE1C LTR MaLR 0 375 184 1646 151 102 37 chr2 13029646 13029998 -237657856 + THE1C LTR MaLR 1 375 0 1749 154 53 56 chr2 13029998 13030182 -237657672 - THE1C LTR MaLR -191 184 1 226 226 57 0 chr2 13030182 13030232 -237657622 - MLT2B1 LTR ERVL -288 232 180 480 176 88 0 chr2 13030517 13030619 -237657235 - MER20 DNA MER1_type -32 187 77 390 281 21 0 chr2 13030620 13030716 -237657138 - HERV16 LTR ERVL -4845 151 54 213 159 23 0 chr2 13031253 13031297 -237656557 + (TA)n Simple_repeat Simple_repeat 2 46 0 21 36 0 0 chr2 13032803 13032831 -237655023 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 13032936 13032959 -237654895 + (TA)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 13033042 13033063 -237654791 + AT_rich Low_complexity Low_complexity 1 21 0 201 329 43 0 chr2 13033431 13033501 -237654353 + L2 LINE L2 3198 3270 -2 42 20 0 0 chr2 13034032 13034081 -237653773 + AT_rich Low_complexity Low_complexity 1 49 0 1713 210 71 14 chr2 13034795 13035219 -237652635 - L1MB4 LINE L1 -2 6178 5731 1105 78 1 106 chr2 13035223 13035422 -237652432 - L1PA11 LINE L1 -2 6172 5992 476 371 30 5 chr2 13035426 13035628 -237652226 + L2 LINE L2 1820 2026 -1288 655 186 8 8 chr2 13036976 13037100 -237650754 - L1MD2 LINE L1 -24 6335 6212 249 299 0 11 chr2 13037597 13037684 -237650170 - L1MEd LINE L1 -4871 1248 1163 1518 166 11 70 chr2 13037887 13038242 -237649612 - L1MA9 LINE L1 0 6312 5979 435 312 59 11 chr2 13038394 13038580 -237649274 + L2 LINE L2 3119 3313 0 406 129 100 0 chr2 13040108 13040178 -237647676 - MADE1 DNA Mariner -2 78 2 189 107 0 0 chr2 13040256 13040284 -237647570 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2155 95 0 0 chr2 13040316 13040620 -237647234 + L1PA13 LINE L1 5857 6160 -3 412 386 12 12 chr2 13040725 13040971 -237646883 + MIR SINE MIR 6 251 -11 203 295 0 16 chr2 13042042 13042103 -237645751 + (CATA)n Simple_repeat Simple_repeat 3 62 0 551 268 95 25 chr2 13042623 13042866 -237644988 - L1ME1 LINE L1 -4 6162 5903 764 165 30 0 chr2 13042872 13043005 -237644849 + MER2 DNA MER2_type 6 142 -203 411 234 24 69 chr2 13043005 13043149 -237644705 - L1ME1 LINE L1 -552 5614 5476 228 197 40 26 chr2 13043403 13043479 -237644375 - L1ME2 LINE L1 -1 6163 6087 780 301 53 40 chr2 13043483 13043623 -237644231 - L1MEc LINE L1 -3279 2936 2799 1987 152 0 3 chr2 13043623 13043925 -237643929 - AluJb SINE Alu -8 304 4 780 301 53 40 chr2 13043925 13044391 -237643463 - L1MEc LINE L1 -3416 2799 2322 354 121 30 0 chr2 13044432 13044498 -237643356 + LTR60 LTR ERV1 1 68 -518 928 224 44 59 chr2 13044740 13044771 -237643083 + LTR43 LTR ERV1 190 220 -382 2156 104 7 7 chr2 13044771 13045080 -237642774 + AluSc SINE Alu 1 309 0 928 224 44 59 chr2 13045080 13045320 -237642534 + LTR43 LTR ERV1 220 457 -145 947 272 80 49 chr2 13045537 13046033 -237641821 - L1MEc LINE L1 -4092 2304 1825 2109 112 0 0 chr2 13046033 13046320 -237641534 + AluSx SINE Alu 1 287 -25 207 88 0 0 chr2 13046323 13046357 -237641497 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 947 272 80 49 chr2 13046357 13046813 -237641041 - L1MEc LINE L1 -4572 1824 1265 597 239 70 37 chr2 13047154 13047397 -237640457 + MER57-int LTR ERV1 1710 1960 -2976 * 2612 233 71 17 chr2 13047394 13048323 -237639531 + MER57-int LTR ERV1 3294 4529 -407 3422 257 14 16 chr2 13048332 13049165 -237638689 + MER57-int LTR ERV1 6312 7143 -394 1340 224 100 20 chr2 13049166 13049626 -237638228 + LTR54B LTR ERV1 1 497 -1 1499 143 109 34 chr2 13050521 13050870 -237636984 - THE1C LTR MaLR 0 375 1 409 274 130 43 chr2 13051971 13052201 -237635653 - MIR SINE MIR -1 261 12 183 368 26 13 chr2 13052328 13052404 -237635450 - MIR3 SINE MIR -117 91 15 192 40 0 0 chr2 13052439 13052464 -237635390 + (CA)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr2 13052731 13052763 -237635091 + AT_rich Low_complexity Low_complexity 1 32 0 201 211 0 0 chr2 13052785 13052837 -237635017 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 447 19 0 0 chr2 13052854 13052906 -237634948 + (CA)n Simple_repeat Simple_repeat 1 52 0 200 350 126 42 chr2 13052992 13053135 -237634719 + MIR SINE MIR 20 174 -88 330 204 20 0 chr2 13053182 13053280 -237634574 + (TA)n Simple_repeat Simple_repeat 2 101 0 357 169 48 6 chr2 13053337 13053503 -237634351 + (TA)n Simple_repeat Simple_repeat 2 174 0 1914 134 24 0 chr2 13053789 13054079 -237633775 + AluSx SINE Alu 1 297 -15 333 118 0 0 chr2 13054364 13054415 -237633439 + (CA)n Simple_repeat Simple_repeat 2 52 0 1645 85 4 0 chr2 13054523 13054758 -237633096 - L1MA2 LINE L1 0 6304 6069 561 88 0 0 chr2 13054759 13054839 -237633015 - L1MA1 LINE L1 -81 6221 6142 8926 104 16 9 chr2 13054971 13056242 -237631612 + HSMAR1 DNA Mariner 4 1284 -3 225 0 0 0 chr2 13056242 13056267 -237631587 + (TA)n Simple_repeat Simple_repeat 2 26 0 210 235 29 59 chr2 13056689 13056757 -237631097 + MIR SINE MIR 186 251 -11 193 269 15 30 chr2 13056985 13057052 -237630802 + L2 LINE L2 3203 3268 -4 233 356 30 20 chr2 13057116 13057217 -237630637 + MIR3 SINE MIR 91 192 -16 389 295 126 63 chr2 13057669 13058082 -237629772 - MLT1H LTR MaLR -4 545 107 291 332 15 49 chr2 13058155 13058420 -237629434 - HAL1 LINE L1 -504 2003 1748 271 279 43 101 chr2 13058758 13058966 -237628888 + LTR67 LTR ERVL 362 557 0 1118 186 59 116 chr2 13059070 13059348 -237628506 - MLT1A1 LTR MaLR 0 365 114 2045 129 50 19 chr2 13059348 13059712 -237628142 + THE1C LTR MaLR 1 375 0 1118 186 59 116 chr2 13059712 13059820 -237628034 - MLT1A1 LTR MaLR -251 114 1 851 292 133 49 chr2 13059847 13060875 -237626979 - HAL1 LINE L1 -883 1624 510 304 341 39 55 chr2 13060998 13061180 -237626674 - HAL1 LINE L1 -2324 183 5 1523 258 72 44 chr2 13062037 13062603 -237625251 - MER119 DNA MER1_type -1 582 1 221 382 22 29 chr2 13062691 13062827 -237625027 - MIR3 SINE MIR -3 205 71 22 35 0 0 chr2 13063336 13063365 -237624489 + AT_rich Low_complexity Low_complexity 1 29 0 250 275 123 43 chr2 13064341 13064479 -237623375 - Charlie8 DNA MER1_type -2153 264 116 201 74 0 0 chr2 13064590 13064617 -237623237 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1030 223 33 110 chr2 13065692 13066196 -237621658 + LTR8A LTR ERV1 55 586 -105 306 73 0 0 chr2 13066197 13066206 -237621648 + (TG)n Simple_repeat Simple_repeat 1 50 0 306 73 0 0 chr2 13066206 13066247 -237621607 + (TG)n Simple_repeat Simple_repeat 2 42 0 192 40 0 0 chr2 13067412 13067437 -237620417 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3765 35 2 2 chr2 13068926 13069382 -237618472 - L1PA3 LINE L1 -3 6152 5697 214 239 0 0 chr2 13070652 13070698 -237617156 + MIR SINE MIR 95 140 -122 262 376 18 0 chr2 13070824 13070933 -237616921 - MIR3 SINE MIR -15 193 83 1917 140 88 37 chr2 13072366 13072773 -237615081 - LTR23 LTR ERV1 -9 428 1 497 226 26 9 chr2 13072873 13072988 -237614866 - LTR23-int LTR ERV1 -223 4900 4784 6554 155 83 10 chr2 13072998 13074261 -237613593 - LTR49-int LTR ERV1 -657 5674 4320 215 61 30 0 chr2 13074286 13074319 -237613535 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1486 168 35 80 chr2 13074319 13074693 -237613161 - LTR49-int LTR ERV1 -4417 1914 1558 1546 200 43 130 chr2 13074818 13075488 -237612366 - LTR9 LTR ERV1 0 612 1 2078 164 50 9 chr2 13076298 13076718 -237611136 - LTR23 LTR ERV1 0 437 1 22 35 0 0 chr2 13076989 13077018 -237610836 + AT_rich Low_complexity Low_complexity 1 29 0 1324 184 92 48 chr2 13077074 13077432 -237610422 - MLT1A2 LTR MaLR 0 374 1 198 396 36 27 chr2 13077686 13077797 -237610057 - MIR SINE MIR -63 145 34 396 0 0 0 chr2 13078392 13078436 -237609418 + (CA)n Simple_repeat Simple_repeat 1 44 0 592 241 45 11 chr2 13078609 13078780 -237609074 + MLT1H LTR MaLR 1 153 -396 1829 206 84 24 chr2 13078850 13079312 -237608542 - LTR2B LTR ERV1 0 490 1 41047 66 14 21 chr2 13079312 13084822 -237603032 - Harlequin LTR ERV1 0 6896 1426 186 43 0 0 chr2 13084822 13084845 -237603009 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 41047 66 14 21 chr2 13084845 13084872 -237602982 - Harlequin LTR ERV1 -5470 1426 1400 6054 255 60 38 chr2 13084988 13087079 -237600775 - L1MD2 LINE L1 -159 6460 4264 2076 177 67 0 chr2 13087079 13087480 -237600374 - MSTA LTR MaLR 0 428 1 6054 255 60 38 chr2 13087480 13089120 -237598734 - L1MD2 LINE L1 -2355 4264 2661 428 173 0 0 chr2 13089465 13089540 -237598314 + MSTD LTR MaLR 322 396 0 1149 273 14 39 chr2 13089540 13090024 -237597830 - L1MD2 LINE L1 -5861 548 20 283 340 116 7 chr2 13092617 13092764 -237595090 + MIR SINE MIR 68 230 -32 21 0 0 0 chr2 13093136 13093157 -237594697 + AT_rich Low_complexity Low_complexity 1 21 0 1761 186 3 0 chr2 13093573 13093864 -237593990 - AluJo SINE Alu -11 301 10 3581 263 20 25 chr2 13094407 13095261 -237592593 + L1MC3 LINE L1 2 848 -5359 1965 111 0 88 chr2 13095261 13095602 -237592252 + AluSx SINE Alu 1 311 -1 3581 263 20 25 chr2 13095602 13096109 -237591745 + L1MC3 LINE L1 848 1356 -4851 1812 232 112 48 chr2 13096110 13097343 -237590511 + L1MC3 LINE L1 1605 2825 -3739 4239 239 66 53 chr2 13097479 13098768 -237589086 + L1MC3 LINE L1 2792 4063 -2501 273 57 0 0 chr2 13098768 13098803 -237589051 + (TG)n Simple_repeat Simple_repeat 2 36 0 4239 239 66 53 chr2 13098803 13101505 -237586349 + L1MC3 LINE L1 4063 5790 -774 1108 215 19 8 chr2 13101662 13101927 -237585927 + L1MC3 LINE L1 7928 8195 -8 21 0 0 0 chr2 13103594 13103615 -237584239 + AT_rich Low_complexity Low_complexity 1 21 0 487 274 52 24 chr2 13105888 13106100 -237581754 - HAL1 LINE L1 0 2507 2290 378 366 32 32 chr2 13106220 13106471 -237581383 - MIR SINE MIR 0 262 12 1546 144 4 0 chr2 13106477 13106713 -237581141 + AluSq SINE Alu 1 237 -76 431 279 0 33 chr2 13107884 13108006 -237579848 - LTR49-int LTR ERV1 -3773 2558 2441 243 0 0 0 chr2 13108151 13108178 -237579676 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 7537 28 0 0 chr2 13108178 13109466 -237578388 - L1PA3 LINE L1 -13 6142 4854 1085 243 6 61 chr2 13110768 13111097 -237576757 - LTR40b LTR ERVL 0 462 152 381 345 39 57 chr2 13111207 13111436 -237576418 - L1MEd LINE L1 -5640 479 255 23 0 0 0 chr2 13111524 13111547 -237576307 + AT_rich Low_complexity Low_complexity 1 23 0 1968 203 31 14 chr2 13111661 13112080 -237575774 - MSTB LTR MaLR 0 426 1 189 404 72 18 chr2 13112107 13112273 -237575581 + L2 LINE L2 2872 3046 -226 213 253 25 0 chr2 13112376 13112455 -237575399 + (TAA)n Simple_repeat Simple_repeat 3 83 0 201 381 79 5 chr2 13112481 13112670 -237575184 - MIR SINE MIR -37 225 23 24 0 0 0 chr2 13112693 13112717 -237575137 + AT_rich Low_complexity Low_complexity 1 24 0 212 250 33 0 chr2 13113272 13113332 -237574522 + A-rich Low_complexity Low_complexity 4 65 0 225 305 84 15 chr2 13115588 13115719 -237572135 - MIR SINE MIR 0 262 123 5507 219 36 62 chr2 13117190 13119503 -237568351 + L1MC2 LINE L1 3510 5729 -615 2028 134 3 0 chr2 13119503 13119802 -237568052 + AluSx SINE Alu 1 300 -12 5507 219 36 62 chr2 13119802 13120393 -237567461 + L1MC2 LINE L1 5729 6334 -10 333 0 0 0 chr2 13120393 13120430 -237567424 + (A)n Simple_repeat Simple_repeat 1 37 0 4780 173 39 19 chr2 13123028 13123928 -237563926 + L1MA8 LINE L1 5304 6184 -107 13472 152 22 13 chr2 13123928 13124440 -237563414 - Tigger1 DNA MER2_type 0 2418 1912 1635 196 3 0 chr2 13124440 13124736 -237563118 - AluJo SINE Alu -15 297 1 13472 152 22 13 chr2 13124736 13125776 -237562078 - Tigger1 DNA MER2_type -506 1912 882 198 0 0 0 chr2 13125776 13125798 -237562056 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2199 89 3 3 chr2 13125800 13126091 -237561763 - AluSp SINE Alu -22 291 1 13472 152 22 13 chr2 13126091 13126932 -237560922 - Tigger1 DNA MER2_type -1536 882 1 4780 173 39 19 chr2 13126932 13126998 -237560856 + L1MA8 LINE L1 6184 6290 -1 276 235 88 10 chr2 13127050 13127152 -237560702 + L1MA9 LINE L1 6116 6225 -87 208 317 10 20 chr2 13127388 13127489 -237560365 - MIR3 SINE MIR -104 104 5 252 272 28 84 chr2 13128775 13128915 -237558939 - MIR SINE MIR -65 143 18 933 268 65 74 chr2 13129054 13129513 -237558341 - MER77 LTR ERV1 -6 599 145 388 271 18 47 chr2 13129498 13129668 -237558186 - MER77 LTR ERV1 -360 245 81 * 2051 186 59 12 chr2 13129711 13130120 -237557734 - MSTA LTR MaLR 0 428 1 518 287 64 5 chr2 13131329 13131531 -237556323 + LTR50 LTR ERVL 11 224 -571 405 305 136 53 chr2 13131528 13131830 -237556024 + LTR50 LTR ERVL 356 682 -113 * 1966 269 23 44 chr2 13132507 13133116 -237554738 + L1M3e LINE L1 466 1061 -6428 3339 237 73 35 chr2 13133161 13134397 -237553457 + L1M3e LINE L1 2008 3196 -4369 1961 136 0 3 chr2 13134397 13134691 -237553163 + AluSc SINE Alu 1 293 -16 3339 237 73 35 chr2 13134691 13135754 -237552100 + L1M3e LINE L1 3196 4405 -3160 539 234 58 47 chr2 13135761 13136035 -237551819 - MER114 LTR ERV -133 515 239 249 298 0 32 chr2 13136095 13136189 -237551665 - MER114 LTR ERV -505 143 53 22 35 0 0 chr2 13136275 13136304 -237551550 + AT_rich Low_complexity Low_complexity 1 29 0 2123 122 0 3 chr2 13136408 13136711 -237551143 - AluSq SINE Alu -11 302 1 416 336 65 70 chr2 13137278 13137694 -237550160 + L1M3e LINE L1 1596 2009 -5477 539 229 0 0 chr2 13137857 13137966 -237549888 - AluJb SINE Alu -203 109 1 521 226 92 0 chr2 13137966 13138130 -237549724 + L1M3e LINE L1 4286 4464 -3101 * 3117 11 0 0 chr2 13138126 13138485 -237549369 - L1PA2 LINE L1 -543 5612 5254 4828 18 0 2 chr2 13138492 13139055 -237548799 + L1PA2 LINE L1 5591 6152 -3 1252 284 26 11 chr2 13139067 13139610 -237548244 + L1M3e LINE L1 4447 4997 -2568 3192 175 42 36 chr2 13139616 13140314 -237547540 + L1MB2 LINE L1 5442 6143 -28 216 67 0 0 chr2 13141935 13141965 -237545889 + (TG)n Simple_repeat Simple_repeat 1 30 0 290 327 48 54 chr2 13142077 13142245 -237545609 - MIR SINE MIR -11 251 85 306 0 0 0 chr2 13142598 13142632 -237545222 + (TG)n Simple_repeat Simple_repeat 2 35 0 847 394 15 0 chr2 13142769 13143170 -237544684 + L2 LINE L2 2438 2844 -470 340 292 44 74 chr2 13143309 13143684 -237544170 + MLT1H1 LTR MaLR 75 506 -49 29 0 0 0 chr2 13143907 13143936 -237543918 + AT_rich Low_complexity Low_complexity 1 29 0 237 365 36 36 chr2 13144858 13145025 -237542829 - MIR SINE MIR -11 251 85 826 263 55 41 chr2 13145208 13145501 -237542353 + L2 LINE L2 2009 2305 -1009 488 326 127 25 chr2 13145517 13145753 -237542101 - LTR16B LTR ERVL -196 268 9 821 297 120 24 chr2 13145761 13146135 -237541719 + L2 LINE L2 2567 2976 -338 205 298 71 77 chr2 13146319 13146487 -237541367 + MIR SINE MIR 25 191 -71 358 114 29 14 chr2 13146841 13146911 -237540943 + CT-rich Low_complexity Low_complexity 3 73 0 1299 152 65 115 chr2 13146921 13147243 -237540611 - AluJb SINE Alu -3 309 4 424 300 92 21 chr2 13148669 13148909 -237538945 + L1MEd LINE L1 27 283 -5836 21 71 0 0 chr2 13149072 13149114 -237538740 + AT_rich Low_complexity Low_complexity 1 42 0 329 289 72 58 chr2 13149688 13149896 -237537958 + MIR SINE MIR 8 218 -44 272 300 75 47 chr2 13150180 13150373 -237537481 - MIR SINE MIR -41 221 19 349 41 20 0 chr2 13150628 13150677 -237537177 - MADE1 DNA Mariner 0 80 31 367 80 0 0 chr2 13150719 13150769 -237537085 + MADE1 DNA Mariner 31 80 0 370 298 41 0 chr2 13150801 13150922 -237536932 - L1MC4 LINE L1 -442 7600 7475 332 115 0 82 chr2 13151188 13151249 -237536605 - MLT2D LTR ERVL 0 414 369 378 224 22 34 chr2 13151256 13151435 -237536419 + (TA)n Simple_repeat Simple_repeat 1 177 0 7456 31 16 0 chr2 13151487 13152480 -237535374 - L1PA4 LINE L1 -3 6152 5156 1832 126 25 7 chr2 13152492 13152777 -237535077 + AluSx SINE Alu 6 295 -17 1015 247 45 17 chr2 13152898 13153190 -237534664 - MLT2D LTR ERVL -114 300 1 1286 24 24 18 chr2 13153532 13153698 -237534156 + L1PA4 LINE L1 5987 6153 -2 1132 234 86 24 chr2 13153933 13154271 -237533583 + MLT2D LTR ERVL 1 359 -55 775 98 40 6 chr2 13154291 13154464 -237533390 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 245 103 0 26 chr2 13154498 13154537 -237533317 + MLT2D LTR ERVL 360 397 0 1042 313 113 44 chr2 13156864 13157609 -237530245 + L2 LINE L2 10 805 -2509 21 36 0 0 chr2 13158154 13158182 -237529672 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 13158420 13158442 -237529412 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 13158637 13158670 -237529184 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr2 13159581 13159626 -237528228 + AT_rich Low_complexity Low_complexity 1 45 0 537 238 7 33 chr2 13159626 13159777 -237528077 - L1MC3 LINE L1 -56 7729 7583 302 132 38 19 chr2 13159772 13159825 -237528029 - L1MC3 LINE L1 -585 7200 7147 * 437 299 16 16 chr2 13159824 13160008 -237527846 + L1M4 LINE L1 2499 2682 -3464 535 228 4 97 chr2 13160137 13160374 -237527480 - L1MCb LINE L1 -3261 3303 3089 420 288 0 14 chr2 13160420 13160559 -237527295 - L1MCb LINE L1 -3629 2935 2799 4634 243 21 45 chr2 13160626 13160749 -237527105 - L1PA13 LINE L1 -2709 4088 3964 1939 156 0 0 chr2 13160749 13161057 -237526797 - AluSg SINE Alu -2 308 1 4634 243 21 45 chr2 13161057 13163485 -237524369 - L1PA13 LINE L1 -2833 3964 1371 774 298 0 14 chr2 13163978 13164193 -237523661 - L1PA13 LINE L1 -6575 212 1 2918 259 60 27 chr2 13164197 13165678 -237522176 - L1MCb LINE L1 -4259 2306 363 2409 117 5 19 chr2 13165678 13166047 -237521807 - THE1B LTR MaLR 0 364 1 2918 259 60 27 chr2 13166047 13166422 -237521432 - L1MCb LINE L1 -6202 363 2 24 0 0 0 chr2 13166507 13166531 -237521323 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr2 13166791 13166831 -237521023 + (CA)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr2 13167173 13167206 -237520648 + (TG)n Simple_repeat Simple_repeat 2 34 0 598 268 46 26 chr2 13167266 13167460 -237520394 + MER20 DNA MER1_type 1 198 -21 1075 292 87 22 chr2 13168489 13168951 -237518903 + L1ME1 LINE L1 21 512 -5911 665 286 26 40 chr2 13169269 13169542 -237518312 + L1ME1 LINE L1 970 1238 -5185 498 307 61 44 chr2 13169580 13170249 -237517605 + L1ME1 LINE L1 1367 2217 -4724 313 294 159 19 chr2 13170261 13170570 -237517284 + L1ME1 LINE L1 2382 2733 -4389 599 274 89 23 chr2 13170714 13171068 -237516786 + L1ME1 LINE L1 2904 3248 -3693 2331 57 7 3 chr2 13171068 13171366 -237516488 - AluY SINE Alu -12 299 1 599 274 89 23 chr2 13171366 13171426 -237516428 + L1ME1 LINE L1 3248 3303 -3638 1756 252 70 51 chr2 13171433 13172981 -237514873 + L1ME1 LINE L1 5178 6750 -211 29 90 0 0 chr2 13173751 13173829 -237514025 + AT_rich Low_complexity Low_complexity 1 78 0 386 118 0 26 chr2 13175991 13176067 -237511787 + (TTCCC)n Simple_repeat Simple_repeat 1 74 0 1915 129 10 26 chr2 13176067 13176369 -237511485 - AluSx SINE Alu -15 297 1 2029 147 39 0 chr2 13177168 13177502 -237510352 - MER7A DNA MER2_type 0 346 2 22 0 0 0 chr2 13178006 13178028 -237509826 + AT_rich Low_complexity Low_complexity 1 22 0 344 291 129 43 chr2 13178849 13179059 -237508795 + HAL1 LINE L1 1425 1652 -855 28 29 0 0 chr2 13179276 13179311 -237508543 + AT_rich Low_complexity Low_complexity 1 35 0 321 332 89 59 chr2 13179526 13179797 -237508057 + L2 LINE L2 3031 3309 -4 228 237 0 52 chr2 13179898 13179995 -237507859 + A-rich Low_complexity Low_complexity 6 97 0 944 271 66 11 chr2 13180010 13180360 -237507494 + L1MCb LINE L1 36 404 -5641 633 194 129 16 chr2 13180371 13180645 -237507209 + L1MC3 LINE L1 5180 5481 -761 333 51 67 67 chr2 13180723 13180901 -237506953 + (TA)n Simple_repeat Simple_repeat 2 179 0 523 23 35 23 chr2 13181018 13181105 -237506749 + (TA)n Simple_repeat Simple_repeat 1 88 0 4525 220 27 15 chr2 13181106 13181450 -237506404 + L1MC3 LINE L1 5488 5827 -1958 4009 57 0 6 chr2 13181450 13181960 -237505894 + L1PA6 LINE L1 5648 6154 0 4525 220 27 15 chr2 13181960 13182733 -237505121 + L1MC3 LINE L1 5827 6618 -1167 498 147 0 0 chr2 13183399 13183474 -237504380 + AluSg/x SINE Alu 211 285 -27 507 331 39 33 chr2 13183535 13183953 -237503901 + L1MC/D LINE L1 5317 5744 -506 23 0 0 0 chr2 13184187 13184210 -237503644 + AT_rich Low_complexity Low_complexity 1 23 0 5355 162 21 26 chr2 13184212 13184790 -237503064 - L1MA4 LINE L1 -9 6291 5712 2211 73 4 0 chr2 13184790 13185064 -237502790 + AluY SINE Alu 21 295 -16 5355 162 21 26 chr2 13185064 13186194 -237501660 - L1MA4 LINE L1 -588 5712 4386 21 89 0 0 chr2 13186203 13186259 -237501595 + AT_rich Low_complexity Low_complexity 1 56 0 198 138 58 11 chr2 13186260 13186347 -237501507 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 38 51 0 0 chr2 13186351 13186410 -237501444 + AT_rich Low_complexity Low_complexity 1 59 0 3322 156 36 21 chr2 13186410 13187040 -237500814 - L1MA4 LINE L1 -1754 4392 3753 852 167 5 31 chr2 13187060 13187282 -237500572 + SVA Other Other 461 676 -710 751 201 34 130 chr2 13187421 13187701 -237500153 + MLT1A1 LTR MaLR 74 321 -44 1654 158 49 38 chr2 13187701 13188069 -237499785 + THE1C LTR MaLR 4 375 0 751 201 34 130 chr2 13188069 13188111 -237499743 + MLT1A1 LTR MaLR 321 365 0 1498 189 50 15 chr2 13188116 13188455 -237499399 + L1MC3 LINE L1 7411 7761 -24 4253 255 65 21 chr2 13189283 13190084 -237497770 + L1MDa LINE L1 510 1400 -5140 3921 61 0 0 chr2 13190084 13190577 -237497277 + L1PA5 LINE L1 5662 6154 0 4253 255 65 21 chr2 13190577 13191181 -237496673 + L1MDa LINE L1 1400 1976 -4564 1537 190 3 10 chr2 13191210 13191395 -237496459 - AluY SINE Alu 0 311 127 303 28 0 0 chr2 13191395 13191431 -237496423 + (TG)n Simple_repeat Simple_repeat 1 36 0 1537 190 3 10 chr2 13191431 13191545 -237496309 - AluY SINE Alu -184 127 14 2037 224 75 45 chr2 13191652 13192016 -237495838 + L1MD2 LINE L1 1614 1965 -4575 2345 78 16 0 chr2 13192016 13192197 -237495657 - AluY SINE Alu 0 311 121 369 0 0 0 chr2 13192197 13192238 -237495616 + (TG)n Simple_repeat Simple_repeat 2 42 0 2345 78 16 0 chr2 13192238 13192362 -237495492 - AluY SINE Alu -190 121 1 2037 224 75 45 chr2 13192362 13192780 -237495074 + L1MD2 LINE L1 1965 2420 -4120 1702 187 9 3 chr2 13192791 13193128 -237494726 - L1P LINE L1 -1352 4794 4456 4833 180 13 33 chr2 13193129 13193577 -237494277 + L1PA16 LINE L1 4924 5380 -786 2274 74 6 19 chr2 13193577 13193888 -237493966 + AluY SINE Alu 1 307 -4 4833 180 13 33 chr2 13193888 13194697 -237493157 + L1PA16 LINE L1 5380 6166 0 21 0 0 0 chr2 13194724 13194745 -237493109 + AT_rich Low_complexity Low_complexity 1 21 0 1287 261 92 5 chr2 13194757 13195442 -237492412 + L1MD2 LINE L1 2453 3204 -3336 258 250 0 42 chr2 13195442 13195514 -237492340 + AluYa8 SINE Alu 116 184 -116 4634 252 72 60 chr2 13195519 13197243 -237490611 + L1MD2 LINE L1 3540 5242 -1511 1520 229 37 0 chr2 13197243 13197593 -237490261 + MLT1A1 LTR MaLR 3 365 0 4634 252 72 60 chr2 13197593 13198614 -237489240 + L1MD2 LINE L1 5242 6249 -504 252 77 0 0 chr2 13198614 13198653 -237489201 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 3729 16 0 5 chr2 13198656 13199086 -237488768 - L1PA3 LINE L1 -15 6140 5713 4634 252 72 60 chr2 13199086 13199468 -237488386 + L1MD2 LINE L1 6250 6732 -21 1683 241 21 58 chr2 13199694 13200213 -237487641 + MLT1D LTR MaLR 6 505 0 284 224 9 93 chr2 13201156 13201263 -237486591 + MLT1J2 LTR MaLR 350 447 -3 194 253 72 12 chr2 13201266 13201349 -237486505 - L2 LINE L2 -1081 2233 2146 21 57 0 0 chr2 13201948 13201983 -237485871 + AT_rich Low_complexity Low_complexity 1 35 0 182 371 131 11 chr2 13202831 13203006 -237484848 - MIR SINE MIR -10 252 57 3890 224 50 15 chr2 13203928 13205400 -237482454 + L1MC2 LINE L1 4593 6120 -224 30 45 0 0 chr2 13205615 13205659 -237482195 + AT_rich Low_complexity Low_complexity 1 44 0 7080 35 0 1 chr2 13205677 13206535 -237481319 - L1PA4 LINE L1 -4 6151 5295 * 14074 25 1 0 chr2 13206530 13208205 -237479649 + L1PA4 LINE L1 3620 5295 -851 23 0 0 0 chr2 13208212 13208235 -237479619 + AT_rich Low_complexity Low_complexity 1 23 0 2204 95 3 0 chr2 13208849 13209143 -237478711 + AluSx SINE Alu 1 295 -17 269 262 184 0 chr2 13209285 13209388 -237478466 + L2 LINE L2 3187 3308 -5 2868 215 5 67 chr2 13209817 13210553 -237477301 - LTR8 LTR ERV1 0 691 1 901 261 5 9 chr2 13212848 13213059 -237474795 - LTR28 LTR ERV1 -324 696 487 235 47 0 47 chr2 13213060 13213103 -237474751 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 7255 31 16 2 chr2 13213103 13214450 -237473404 - L1PA3 LINE L1 -24 6131 4765 786 247 187 28 chr2 13214473 13214827 -237473027 - LTR28 LTR ERV1 -649 371 1 1469 162 23 5 chr2 13214830 13215150 -237472704 - LTR28-int LTR ERV1 -4 7087 4918 8026 150 45 6 chr2 13215151 13216468 -237471386 + THE1C-int LTR MaLR 212 1579 -1 1883 143 67 17 chr2 13216470 13216827 -237471027 + THE1C LTR MaLR 1 375 0 13636 160 36 25 chr2 13216827 13220652 -237467202 - MER52-int LTR ERV1 -524 5422 632 393 204 0 45 chr2 13220673 13220761 -237467093 - MER52-int LTR ERV1 -885 3995 3912 4272 211 27 70 chr2 13220771 13221945 -237465909 - MER52-int LTR ERV1 -440 4777 548 535 189 104 67 chr2 13221942 13222106 -237465748 - MER52-int LTR ERV1 -6516 575 406 * 544 269 96 56 chr2 13222093 13222342 -237465512 - MER52-int LTR ERV1 -6832 259 1 875 278 23 23 chr2 13222390 13222653 -237465201 - LTR28 LTR ERV1 -316 704 442 573 208 13 47 chr2 13222789 13222938 -237464916 - LTR28 LTR ERV1 -874 146 3 248 252 141 0 chr2 13223162 13223243 -237464611 - MIR SINE MIR -94 114 35 1856 40 0 0 chr2 13225977 13226200 -237461654 - L1PA4 LINE L1 -13 6142 5920 197 379 115 21 chr2 13226626 13226861 -237460993 + MIR SINE MIR 5 261 -1 239 203 125 16 chr2 13227613 13227677 -237460177 + L2 LINE L2 3015 3085 -187 1483 276 82 19 chr2 13228220 13228765 -237459089 - L1ME3 LINE L1 -6 6156 5566 1610 182 13 23 chr2 13228765 13229072 -237458782 + AluJb SINE Alu 1 304 -8 1483 276 82 19 chr2 13229072 13229152 -237458702 - L1ME3 LINE L1 -596 5566 5492 427 214 55 41 chr2 13229229 13229374 -237458480 - L1ME1 LINE L1 -18 6148 6002 11999 245 32 14 chr2 13229376 13234192 -237453662 - L1PA16 LINE L1 -285 7319 2449 243 0 0 0 chr2 13234192 13234219 -237453635 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 11999 245 32 14 chr2 13234219 13234495 -237453359 - L1PA16 LINE L1 -5155 2449 2179 373 274 0 0 chr2 13234622 13234728 -237453126 - L1ME3 LINE L1 -885 5474 5369 24 32 0 0 chr2 13235054 13235085 -237452769 + AT_rich Low_complexity Low_complexity 1 31 0 3349 187 16 14 chr2 13236520 13237214 -237450640 + L1P LINE L1 3219 3913 -2233 202 297 184 43 chr2 13237323 13237508 -237450346 - MIR SINE MIR -3 259 49 485 266 29 29 chr2 13237718 13237891 -237449963 - L2 LINE L2 0 3313 3141 1477 299 72 46 chr2 13237935 13239195 -237448659 + L1MCc LINE L1 -498 727 -5689 1662 236 27 42 chr2 13239195 13239669 -237448185 + MLT1C LTR MaLR 1 467 0 1477 299 72 46 chr2 13239669 13239947 -237447907 + L1MCc LINE L1 727 996 -5420 420 20 0 0 chr2 13239947 13239996 -237447858 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1477 299 72 46 chr2 13239996 13240025 -237447829 + L1MCc LINE L1 996 1433 -4983 23 54 0 0 chr2 13240034 13240071 -237447783 + AT_rich Low_complexity Low_complexity 1 37 0 428 234 61 8 chr2 13240243 13240403 -237447451 + L1MCc LINE L1 1710 1825 -4601 4807 154 9 4 chr2 13240403 13241669 -237446185 - L1PA16 LINE L1 -3 6163 4873 2892 226 56 5 chr2 13241691 13242260 -237445594 - L1P LINE L1 -1158 4988 4370 192 77 0 0 chr2 13242260 13242286 -237445568 + (TG)n Simple_repeat Simple_repeat 2 27 0 2892 226 56 5 chr2 13242286 13242472 -237445382 - L1P LINE L1 -1776 4370 4195 704 298 91 14 chr2 13242466 13242980 -237444874 + L1MCc LINE L1 1928 2481 -4126 * 328 284 31 53 chr2 13243001 13243226 -237444628 + L1MCc LINE L1 2727 2946 -3480 1652 192 7 10 chr2 13243330 13243622 -237444232 - AluJb SINE Alu -12 300 10 2280 143 6 19 chr2 13243622 13243987 -237443867 - THE1B LTR MaLR -2 362 3 9083 119 107 2 chr2 13243989 13245419 -237442435 - THE1B-int LTR MaLR 0 1580 1 2055 139 21 48 chr2 13245419 13245793 -237442061 - THE1B LTR MaLR 0 364 1 745 261 62 12 chr2 13245809 13246134 -237441720 + L1MCc LINE L1 3031 3371 -3055 735 228 54 0 chr2 13246134 13246301 -237441553 + LTR47A LTR ERVL 277 452 0 266 302 79 22 chr2 13246317 13246456 -237441398 + LTR47A-int LTR ERVL 15 161 -5182 470 236 6 67 chr2 13246643 13246808 -237441046 + HERV17 LTR ERV1 2131 2285 -2595 2291 249 62 23 chr2 13246832 13247530 -237440324 - MER50 LTR ERV1 0 734 10 775 256 26 64 chr2 13247537 13247909 -237439945 + HERV17 LTR ERV1 1948 2397 -3549 440 211 85 13 chr2 13247907 13248020 -237439834 + HERV17 LTR ERV1 2538 2911 -3352 * 538 191 176 15 chr2 13248029 13248165 -237439689 + MER34C LTR ERV1 160 317 -268 273 103 0 0 chr2 13248165 13248204 -237439650 + HERV17 LTR ERV1 1197 1235 -3888 2714 143 41 12 chr2 13248223 13248740 -237439114 + HERV17 LTR ERV1 1072 1603 -6213 404 148 49 12 chr2 13248740 13248821 -237439033 + MER4A LTR ERV1 1 84 -580 547 186 9 3 chr2 13248821 13248935 -237438919 - LTR10E LTR ERV1 0 590 402 2406 204 80 95 chr2 13248967 13249894 -237437960 + HERV17 LTR ERV1 26 938 -5711 1165 124 81 15 chr2 13249887 13250294 -237437560 + HERV17 LTR ERV1 709 2694 -3955 * 711 287 0 6 chr2 13250285 13250466 -237437388 + HERV17 LTR ERV1 3138 3317 -4468 * 4038 158 32 41 chr2 13250446 13251504 -237436350 + HERV17 LTR ERV1 956 3447 -3202 328 244 171 0 chr2 13251509 13251591 -237436263 - LTR8 LTR ERV1 -438 253 158 2196 79 47 0 chr2 13251591 13251931 -237435923 + MER57-int LTR ERV1 1810 2165 -4731 2505 173 10 5 chr2 13252024 13252561 -237435293 + MER57-int LTR ERV1 2567 4823 -1826 3346 206 0 5 chr2 13252571 13253158 -237434696 + MER57-int LTR ERV1 3376 3959 -2937 2200 162 17 33 chr2 13253317 13253872 -237433982 + LTR10E LTR ERV1 1 602 0 785 156 5 64 chr2 13253891 13254102 -237433752 + MER4A LTR ERV1 261 517 -147 2245 125 91 24 chr2 13254104 13254145 -237433709 + MER57-int LTR ERV1 1791 1828 -5988 3207 80 2 2 chr2 13254145 13254572 -237433282 - LTR3 LTR ERVK -2 427 1 2245 125 91 24 chr2 13254572 13255025 -237432829 + MER57-int LTR ERV1 1828 2318 -5498 3463 123 45 72 chr2 13255026 13255718 -237432136 + MER57-int LTR ERV1 2868 3540 -4276 2439 191 28 2 chr2 13255719 13256149 -237431705 - LTR8 LTR ERV1 -250 441 1 11520 139 30 73 chr2 13256149 13257286 -237430568 + MER57-int LTR ERV1 3073 4258 -3160 1758 118 50 4 chr2 13257286 13257571 -237430283 + AluSx SINE Alu 11 307 0 11520 139 30 73 chr2 13257571 13258349 -237429505 + MER57-int LTR ERV1 4258 4866 -2552 2153 132 3 0 chr2 13258349 13258659 -237429195 + AluSp SINE Alu 1 311 -2 11520 139 30 73 chr2 13258659 13259148 -237428706 + MER57-int LTR ERV1 4866 5375 -2043 3932 118 38 12 chr2 13259147 13259874 -237427980 + MER57-int LTR ERV1 5249 6223 -1593 * 381 93 0 0 chr2 13259979 13260033 -237427821 + (TG)n Simple_repeat Simple_repeat 1 54 0 341 363 45 5 chr2 13260488 13260689 -237427165 - MIR SINE MIR -3 259 51 2072 128 0 24 chr2 13261500 13261798 -237426056 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 13262403 13262424 -237425430 + AT_rich Low_complexity Low_complexity 1 21 0 190 328 0 0 chr2 13262763 13262824 -237425030 + MIR SINE MIR 172 232 -30 234 275 50 12 chr2 13263310 13263390 -237424464 + MIR SINE MIR 132 214 -48 2581 118 3 0 chr2 13263449 13263812 -237424042 + THE1B LTR MaLR 1 364 0 27 73 0 0 chr2 13264950 13265005 -237422849 + AT_rich Low_complexity Low_complexity 1 55 0 237 180 62 47 chr2 13265154 13265282 -237422572 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 * 344 182 85 0 chr2 13265234 13265399 -237422455 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 347 182 45 28 chr2 13265293 13265469 -237422385 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 32 0 0 0 chr2 13265469 13265501 -237422353 + AT_rich Low_complexity Low_complexity 1 32 0 259 234 29 29 chr2 13265504 13265675 -237422179 + (TTATA)n Simple_repeat Simple_repeat 5 175 0 * 360 207 59 6 chr2 13265664 13265833 -237422021 + (TA)n Simple_repeat Simple_repeat 2 179 0 296 289 50 69 chr2 13265924 13266083 -237421771 + MIR SINE MIR 36 191 -71 238 291 64 73 chr2 13266415 13266525 -237421329 - L2 LINE L2 0 3272 3164 351 44 0 0 chr2 13268716 13268761 -237419093 + (CA)n Simple_repeat Simple_repeat 2 46 0 2386 74 3 13 chr2 13268932 13269243 -237418611 + AluY SINE Alu 3 310 -1 283 294 20 0 chr2 13269443 13269545 -237418309 + L1MCb LINE L1 1 104 -5941 617 230 24 38 chr2 13269563 13269776 -237418078 + L1MCb LINE L1 1560 1769 -4795 654 250 11 44 chr2 13269781 13269961 -237417893 - MIR SINE MIR -87 175 2 280 226 145 0 chr2 13270864 13270926 -237416928 + MER69 DNA AcHobo 4 74 -2452 787 279 9 9 chr2 13271022 13271237 -237416617 + MER20 DNA MER1_type 1 215 -4 1899 123 44 82 chr2 13271283 13271673 -237416181 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 13271931 13271959 -237415895 + AT_rich Low_complexity Low_complexity 1 28 0 333 47 0 0 chr2 13273061 13273104 -237414750 + (TG)n Simple_repeat Simple_repeat 2 44 0 183 348 99 51 chr2 13274878 13275211 -237412643 + L3b LINE CR1 1104 1452 -131 745 154 0 0 chr2 13276347 13276470 -237411384 - AluSc SINE Alu -22 287 165 995 268 100 12 chr2 13277147 13277487 -237410367 + MLT1B LTR MaLR 1 370 -20 886 81 81 0 chr2 13277670 13277794 -237410060 + MER85 DNA T2_type 1 134 -5 251 221 63 16 chr2 13278261 13278388 -237409466 + (CATATA)n Simple_repeat Simple_repeat 5 137 0 23 0 0 0 chr2 13278478 13278501 -237409353 + AT_rich Low_complexity Low_complexity 1 23 0 202 371 77 21 chr2 13279369 13279512 -237408342 + MIR SINE MIR 91 241 -21 1044 181 160 0 chr2 13280160 13280398 -237407456 + MLT2D LTR ERVL 1 276 -138 1190 216 0 0 chr2 13280398 13280625 -237407229 + ERVL-D LTR ERVL 882 1108 -4656 5477 162 38 22 chr2 13280649 13281676 -237406178 + ERVL-D LTR ERVL 4715 5757 -7 983 137 0 0 chr2 13281676 13281822 -237406032 + MLT2D LTR ERVL 1 146 -268 1298 176 117 0 chr2 13281823 13282062 -237405792 - MLT1A1 LTR MaLR 0 365 99 182 355 45 32 chr2 13283336 13283491 -237404363 - L2 LINE L2 -179 3093 2937 28 48 0 0 chr2 13284215 13284257 -237403597 + AT_rich Low_complexity Low_complexity 1 42 0 2172 78 3 7 chr2 13285122 13285467 -237402387 - AluY SINE Alu 0 344 1 220 281 0 0 chr2 13286373 13286430 -237401424 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 192 238 0 0 chr2 13286434 13286497 -237401357 + (TG)n Simple_repeat Simple_repeat 2 64 0 24 32 0 0 chr2 13286644 13286675 -237401179 + AT_rich Low_complexity Low_complexity 1 31 0 874 153 0 0 chr2 13286889 13287020 -237400834 - FLAM_C SINE Alu -2 131 1 1637 210 21 0 chr2 13287138 13287472 -237400382 - MER58B DNA MER1_type 0 341 1 1038 197 14 10 chr2 13288147 13288355 -237399499 + MER2 DNA MER2_type 3 211 -134 34 0 0 0 chr2 13288656 13288690 -237399164 + AT_rich Low_complexity Low_complexity 1 34 0 29 28 0 0 chr2 13288744 13288780 -237399074 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chr2 13289408 13289445 -237398409 + AT_rich Low_complexity Low_complexity 1 37 0 7437 34 2 0 chr2 13289803 13291016 -237396838 - L1PA4 LINE L1 0 6155 4941 10629 37 8 1 chr2 13291016 13292334 -237395520 + L1P LINE L1 2935 4262 -1884 2458 143 61 15 chr2 13292502 13292671 -237395183 + LTR1B LTR ERV1 1 161 -665 2042 153 30 33 chr2 13292671 13293036 -237394818 - THE1B LTR MaLR 0 364 1 2458 143 61 15 chr2 13293036 13293613 -237394241 + LTR1B LTR ERV1 161 826 0 216 0 0 0 chr2 13294037 13294061 -237393793 + (TG)n Simple_repeat Simple_repeat 2 25 0 230 360 10 10 chr2 13294176 13294276 -237393578 + MLT1L LTR MaLR 432 531 -84 21 0 0 0 chr2 13296870 13296891 -237390963 + AT_rich Low_complexity Low_complexity 1 21 0 454 317 124 16 chr2 13296969 13297218 -237390636 + MER110-int LTR ERV1 159 434 -4213 255 164 60 30 chr2 13298977 13299044 -237388810 - MADE1 DNA Mariner -11 69 1 253 125 0 0 chr2 13300363 13300403 -237387451 - Alu SINE Alu -10 291 252 * 453 197 6 142 chr2 13300398 13300581 -237387273 - MER99 DNA DNA -478 350 193 1648 206 9 24 chr2 13300895 13301234 -237386620 - MLT1A1 LTR MaLR -13 352 19 353 259 89 51 chr2 13301241 13301399 -237386455 + MIR SINE MIR 91 254 -8 21 0 0 0 chr2 13301912 13301933 -237385921 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 13302151 13302180 -237385674 + AT_rich Low_complexity Low_complexity 1 29 0 650 248 100 19 chr2 13302242 13302452 -237385402 - MER89 LTR ERV1 -5 554 328 2974 151 41 12 chr2 13302456 13303042 -237384812 + MER4B LTR ERV1 1 769 -10 443 247 45 0 chr2 13303051 13303259 -237384595 - MER89 LTR ERV1 -233 326 11 22 80 0 0 chr2 13303395 13303445 -237384409 + AT_rich Low_complexity Low_complexity 1 50 0 3568 168 39 16 chr2 13303678 13304388 -237383466 - LTR8A LTR ERV1 0 727 1 42507 36 24 1 chr2 13304607 13310621 -237377233 - L1PA3 LINE L1 0 6155 1 197 126 87 10 chr2 13310967 13311070 -237376784 + (TA)n Simple_repeat Simple_repeat 1 111 0 287 347 57 0 chr2 13311103 13311227 -237376627 - L2 LINE L2 -2 3270 3140 1851 163 39 33 chr2 13311227 13311589 -237376265 + THE1B LTR MaLR 1 364 0 11009 117 10 0 chr2 13311589 13313153 -237374701 + THE1B-int LTR MaLR 1 1580 0 1643 181 47 33 chr2 13313153 13313512 -237374342 + THE1B LTR MaLR 1 364 0 436 146 101 0 chr2 13313541 13313630 -237374224 + MER4A LTR ERV1 1 98 -566 1788 107 161 83 chr2 13313630 13314003 -237373851 + MER4A LTR ERV1 261 662 -2 2477 121 72 34 chr2 13314008 13314555 -237373299 + MER4A-int LTR ERV1 1 612 -5986 385 143 0 43 chr2 13314549 13314619 -237373235 + MER4A-int LTR ERV1 733 799 -5799 * 311 137 0 0 chr2 13314689 13314740 -237373114 + MER4A-int LTR ERV1 836 886 -5712 * 1129 93 164 52 chr2 13314738 13315043 -237372811 + MER4A-int LTR ERV1 518 749 -4266 3908 97 55 21 chr2 13315075 13315745 -237372109 + MER4A-int LTR ERV1 1803 2495 -4103 1248 184 57 4 chr2 13315745 13315989 -237371865 - LTR8 LTR ERV1 -434 257 1 1159 133 0 9 chr2 13315989 13316207 -237371647 + MER4A-int LTR ERV1 2737 2952 -3646 22160 121 11 17 chr2 13316216 13321218 -237366636 + L1P3 LINE L1 10 5041 -1420 7306 28 1 0 chr2 13321218 13322116 -237365738 + L1PA3 LINE L1 5283 6183 0 375 208 0 0 chr2 13322116 13322188 -237365666 + MER4A-int LTR ERV1 2150 2221 -4537 215 59 0 29 chr2 13322193 13322227 -237365627 + (TA)n Simple_repeat Simple_repeat 2 34 0 6114 127 41 17 chr2 13322257 13323336 -237364518 + MER4A-int LTR ERV1 3921 5025 -1573 5588 117 63 38 chr2 13323338 13324355 -237363499 + MER4A-int LTR ERV1 5557 6598 0 453 167 89 0 chr2 13324356 13324446 -237363408 + MER4A LTR ERV1 1 98 -566 1552 133 42 75 chr2 13324446 13324803 -237363051 + MER4A LTR ERV1 261 664 0 288 337 98 10 chr2 13325722 13325915 -237361939 + MIR SINE MIR 53 262 0 1183 251 85 6 chr2 13326549 13326879 -237360975 - MLT1A2 LTR MaLR 0 374 19 21 0 0 0 chr2 13327176 13327197 -237360657 + AT_rich Low_complexity Low_complexity 1 21 0 621 272 42 33 chr2 13327582 13327795 -237360059 + MIR SINE MIR 2 216 -46 365 330 115 18 chr2 13327818 13328036 -237359818 - L2 LINE L2 -70 3243 3005 222 267 42 91 chr2 13328043 13328208 -237359646 - L2 LINE L2 -520 2794 2638 322 214 179 0 chr2 13328560 13328644 -237359210 - L1MD2 LINE L1 -55 6304 6206 352 300 0 18 chr2 13328655 13328765 -237359089 - L1MD2 LINE L1 -214 6145 6038 891 213 51 94 chr2 13328775 13328880 -237358974 - L1M4 LINE L1 -3136 3010 2902 1103 210 90 26 chr2 13328880 13329223 -237358631 - MLT1A1 LTR MaLR 0 365 1 891 213 51 94 chr2 13329223 13329488 -237358366 - L1M4 LINE L1 -3244 2902 2656 495 271 135 35 chr2 13331200 13331488 -237356366 - MER110A LTR ERV1 -81 387 71 246 155 31 216 chr2 13332234 13332331 -237355523 - MLT1E2 LTR MaLR -537 89 11 2268 79 0 16 chr2 13332472 13332788 -237355066 - AluY SINE Alu 0 311 1 640 302 67 62 chr2 13332841 13333349 -237354505 + L1ME LINE L1 20 533 -5537 240 111 0 0 chr2 13333349 13333385 -237354469 + (CAT)n Simple_repeat Simple_repeat 2 37 0 640 302 67 62 chr2 13333385 13333443 -237354411 + L1ME LINE L1 533 589 -5481 1985 112 0 11 chr2 13333517 13333846 -237354008 + AluSx SINE Alu 1 326 0 1455 287 22 6 chr2 13334101 13334589 -237353265 + L1M4 LINE L1 3330 3825 -2321 919 244 128 24 chr2 13334666 13335251 -237352603 + L1ME LINE L1 2562 3207 -2873 1119 273 70 52 chr2 13335258 13336015 -237351839 + L1ME1 LINE L1 2785 3555 -2525 1030 266 105 6 chr2 13336017 13336340 -237351514 + L1ME1 LINE L1 3702 4056 -2024 1372 273 31 33 chr2 13336446 13336995 -237350859 + L1ME1 LINE L1 5550 6097 -3 2096 253 68 19 chr2 13339400 13340334 -237347520 + MER45B DNA AcHobo 33 1040 0 1175 240 0 91 chr2 13340330 13340672 -237347182 + MER77 LTR ERV1 1 311 -294 * 840 231 16 0 chr2 13340658 13340840 -237347014 + MER77 LTR ERV1 421 605 0 * 662 200 53 129 chr2 13340996 13341336 -237346518 - L1M4 LINE L1 -869 5513 5200 450 127 0 0 chr2 13341338 13341409 -237346445 + (TCC)n Simple_repeat Simple_repeat 3 73 0 800 245 51 15 chr2 13342324 13342520 -237345334 + L1MDa LINE L1 75 277 -6263 260 247 0 27 chr2 13342523 13342596 -237345258 + A-rich Low_complexity Low_complexity 2 72 0 9521 189 57 61 chr2 13342626 13342814 -237345040 - L1M4 LINE L1 -3899 2485 2298 1820 99 88 0 chr2 13342814 13343077 -237344777 - AluSq SINE Alu -13 300 15 362 62 0 0 chr2 13343077 13343125 -237344729 - Alu SINE Alu -254 48 1 9521 189 57 61 chr2 13343125 13345360 -237342494 - L1M4 LINE L1 -4084 2300 24 1752 91 4 8 chr2 13345437 13345678 -237342176 - AluSg/x SINE Alu -7 305 66 444 290 19 26 chr2 13345807 13345962 -237341892 + MIR SINE MIR 103 256 -6 462 287 20 20 chr2 13346236 13346480 -237341374 + L1MDa LINE L1 2188 2431 -4111 2187 65 0 49 chr2 13346782 13347089 -237340765 - AluY SINE Alu -19 292 1 284 188 0 0 chr2 13347691 13347739 -237340115 - LTR22A LTR ERVK 0 458 411 216 162 27 0 chr2 13348570 13348607 -237339247 - L2 LINE L2 -9 3304 3267 219 387 45 67 chr2 13348989 13349614 -237338240 - L2 LINE L2 -458 2856 2246 1522 191 33 60 chr2 13350731 13351097 -237336757 - MLT1B LTR MaLR 0 390 35 364 148 2 68 chr2 13351200 13351289 -237336565 + Alu SINE Alu 234 302 0 194 301 84 48 chr2 13352342 13352425 -237335429 + L2 LINE L2 3228 3313 0 185 280 80 50 chr2 13353113 13353213 -237334641 + L2 LINE L2 2753 2855 -459 2186 108 0 0 chr2 13353346 13353642 -237334212 - AluSp SINE Alu -11 302 7 186 43 0 0 chr2 13354003 13354026 -237333828 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 13354492 13354513 -237333341 + AT_rich Low_complexity Low_complexity 1 21 0 4297 156 38 7 chr2 13355149 13355914 -237331940 - Tigger3(Golem) DNA MER2_type -1 3028 2240 514 257 28 0 chr2 13355912 13356021 -237331833 - Tigger3(Golem) DNA MER2_type -2917 112 1 * 22 35 0 0 chr2 13356114 13356143 -237331711 + AT_rich Low_complexity Low_complexity 1 29 0 405 155 0 56 chr2 13358654 13358725 -237329129 - AluJ/FRAM SINE Alu -20 292 226 189 340 116 14 chr2 13358749 13358896 -237328958 - L2 LINE L2 -977 2337 2176 32 43 0 0 chr2 13359103 13359149 -237328705 + AT_rich Low_complexity Low_complexity 1 46 0 2658 259 83 12 chr2 13359540 13360114 -237327740 + L1MC1 LINE L1 4431 4963 -1370 2034 94 14 0 chr2 13360114 13360400 -237327454 + AluY SINE Alu 1 290 -21 2658 259 83 12 chr2 13360400 13361488 -237326366 + L1MC1 LINE L1 4963 6272 -61 2118 268 37 51 chr2 13361591 13363351 -237324503 + L1M4c LINE L1 23 1924 -4460 1517 210 35 24 chr2 13363524 13363895 -237323959 - MLT1-int LTR MaLR -45 1326 952 311 379 21 7 chr2 13364086 13364231 -237323623 + MIR SINE MIR 8 154 -108 258 336 62 34 chr2 13364764 13364910 -237322944 + MIR SINE MIR 20 169 -93 1021 249 62 24 chr2 13366407 13366744 -237321110 - L1MD2 LINE L1 -19 6340 5991 249 159 0 0 chr2 13366761 13366805 -237321049 - L1M4 LINE L1 -1588 4558 4515 11528 175 25 20 chr2 13366839 13367119 -237320735 - L1 LINE L1 -2646 4919 4642 2068 117 0 0 chr2 13367119 13367410 -237320444 - AluSc SINE Alu -18 291 1 11528 175 25 20 chr2 13367410 13370375 -237317479 - L1 LINE L1 -2923 4642 1688 30 45 0 0 chr2 13370491 13370535 -237317319 + AT_rich Low_complexity Low_complexity 1 44 0 184 375 0 11 chr2 13370977 13371065 -237316789 - MIR SINE MIR -122 140 54 1905 147 0 3 chr2 13371164 13371456 -237316398 + AluSq SINE Alu 2 292 -21 957 120 0 0 chr2 13371476 13371609 -237316245 + AluSg/x SINE Alu 169 301 -11 714 129 0 4 chr2 13373173 13373288 -237314566 - LTR12 LTR ERV1 0 714 175 306 263 20 10 chr2 13373290 13373389 -237314465 - LTR30 LTR ERV1 -79 643 544 579 213 155 24 chr2 13373389 13373596 -237314258 - LTR12 LTR ERV1 -437 277 44 227 209 0 0 chr2 13373596 13373639 -237314215 - LTR30 LTR ERV1 -679 43 1 367 307 49 79 chr2 13373714 13374180 -237313674 + L2 LINE L2 1938 2389 -925 223 350 56 49 chr2 13374203 13374346 -237313508 + L2 LINE L2 2551 2694 -620 1037 201 23 9 chr2 13374409 13374628 -237313226 + MLT1C LTR MaLR 3 224 -243 730 176 34 128 chr2 13374650 13374782 -237313072 + MER2 DNA MER2_type 8 116 -229 1852 125 3 26 chr2 13374782 13375085 -237312769 - AluSx SINE Alu -16 296 1 730 176 34 128 chr2 13375085 13375156 -237312698 + MER2 DNA MER2_type 116 192 -153 679 234 160 5 chr2 13375200 13375388 -237312466 + MLT1C LTR MaLR 250 466 -1 24 0 0 0 chr2 13377457 13377481 -237310373 + AT_rich Low_complexity Low_complexity 1 24 0 315 288 144 8 chr2 13377704 13377829 -237310025 + MIR SINE MIR 121 262 0 229 331 141 0 chr2 13378628 13378749 -237309105 - L2 LINE L2 -4 3309 3172 9162 31 1 1 chr2 13378793 13379896 -237307958 - L1PA3 LINE L1 -1909 4237 3135 9767 25 1 0 chr2 13379896 13381832 -237306022 + L1PA3 LINE L1 4223 6162 0 29 94 0 0 chr2 13381873 13381958 -237305896 + AT_rich Low_complexity Low_complexity 1 85 0 219 129 0 48 chr2 13384039 13384101 -237303753 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 989 208 11 0 chr2 13384231 13384414 -237303440 - MER5A DNA MER1_type -3 186 2 1627 181 178 6 chr2 13384567 13384932 -237302922 + MSTA LTR MaLR 1 428 0 216 287 69 23 chr2 13384963 13385050 -237302804 + MIR3 SINE MIR 64 154 -54 22 0 0 0 chr2 13385423 13385445 -237302409 + AT_rich Low_complexity Low_complexity 1 22 0 422 306 37 50 chr2 13385479 13385721 -237302133 + L2 LINE L2 3075 3313 0 225 0 0 0 chr2 13385807 13385832 -237302022 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 385 275 80 55 chr2 13386268 13386468 -237301386 + MIR SINE MIR 56 260 -2 208 333 16 0 chr2 13387301 13387364 -237300490 - L2 LINE L2 -3 3310 3247 1118 204 0 27 chr2 13387369 13387589 -237300265 - MER20 DNA MER1_type -5 214 1 246 351 38 15 chr2 13387801 13387932 -237299922 - MIR SINE MIR -6 256 123 1863 137 7 0 chr2 13387966 13388271 -237299583 + AluSg SINE Alu 1 307 0 22 0 0 0 chr2 13389383 13389405 -237298449 + AT_rich Low_complexity Low_complexity 1 22 0 195 309 16 81 chr2 13389530 13389653 -237298201 - L2 LINE L2 -209 3063 2949 369 320 109 0 chr2 13389793 13389968 -237297886 - MIR SINE MIR -27 235 42 1149 86 0 0 chr2 13390543 13391109 -237296745 + (TA)n Simple_repeat Simple_repeat 1 566 0 231 61 0 0 chr2 13391301 13391334 -237296520 + (TA)n Simple_repeat Simple_repeat 1 33 0 229 44 89 0 chr2 13391462 13391507 -237296347 + (TTATA)n Simple_repeat Simple_repeat 1 49 0 501 52 67 22 chr2 13391643 13391778 -237296076 + (TA)n Simple_repeat Simple_repeat 2 142 0 181 390 7 58 chr2 13391839 13391993 -237295861 + L2 LINE L2 2948 3093 -179 1344 213 49 47 chr2 13392142 13392577 -237295277 + MLT2D LTR ERVL 1 464 0 23 0 0 0 chr2 13392581 13392604 -237295250 + AT_rich Low_complexity Low_complexity 1 23 0 413 257 83 9 chr2 13392848 13392957 -237294897 + MIR SINE MIR 33 149 -59 324 0 0 0 chr2 13394000 13394036 -237293818 + (TTA)n Simple_repeat Simple_repeat 3 38 0 1511 165 37 77 chr2 13394219 13394681 -237293173 - MER67C LTR ERV1 -100 414 1 27 29 0 0 chr2 13394797 13394831 -237293023 + AT_rich Low_complexity Low_complexity 1 34 0 430 314 30 24 chr2 13395290 13395459 -237292395 - MIR SINE MIR -28 234 65 189 0 0 0 chr2 13395819 13395840 -237292014 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 22 56 0 0 chr2 13396096 13396132 -237291722 + AT_rich Low_complexity Low_complexity 1 36 0 213 328 33 66 chr2 13396136 13396258 -237291596 + MIR3 SINE MIR 67 184 -24 342 0 0 0 chr2 13396411 13396449 -237291405 + (TA)n Simple_repeat Simple_repeat 2 39 0 1330 197 66 138 chr2 13396501 13397003 -237290851 + MLT1E2 LTR MaLR 36 501 -125 247 240 37 51 chr2 13397025 13397127 -237290727 - MIR SINE MIR -56 206 106 514 204 9 4 chr2 13397171 13397285 -237290569 + MLT1D LTR MaLR 358 505 0 3688 151 27 3 chr2 13397325 13397955 -237289899 + L1PA13 LINE L1 5513 6157 -6 185 348 0 29 chr2 13398042 13398111 -237289743 + L2 LINE L2 3179 3245 -68 24 0 0 0 chr2 13399197 13399221 -237288633 + AT_rich Low_complexity Low_complexity 1 24 0 1512 162 16 67 chr2 13399560 13399874 -237287980 - AluJo SINE Alu -14 298 1 353 362 74 28 chr2 13399926 13400385 -237287469 - L1MEc LINE L1 -4789 1607 1128 198 236 0 0 chr2 13400394 13400449 -237287405 + (CATA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr2 13400577 13400601 -237287253 + AT_rich Low_complexity Low_complexity 1 24 0 301 111 254 0 chr2 13401025 13401088 -237286766 + MADE1 DNA Mariner 2 80 0 254 295 92 30 chr2 13401168 13401473 -237286381 + L1ME3A LINE L1 4919 5242 -904 679 233 90 29 chr2 13401512 13401757 -237286097 + L1ME3A LINE L1 5898 6157 -13 217 221 26 13 chr2 13401905 13401982 -237285872 + (TA)n Simple_repeat Simple_repeat 1 78 0 446 79 13 26 chr2 13402244 13402320 -237285534 - L1PA11 LINE L1 -2749 3397 3323 * 11559 138 25 1 chr2 13402310 13405025 -237282829 + L1PA11 LINE L1 3399 6174 0 444 290 19 26 chr2 13405700 13405855 -237281999 + MIR SINE MIR 103 256 -6 23 0 0 0 chr2 13406221 13406244 -237281610 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 13406670 13406700 -237281154 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 13406721 13406756 -237281098 + AT_rich Low_complexity Low_complexity 1 35 0 638 254 63 54 chr2 13407110 13407444 -237280410 + L1M4 LINE L1 2637 2973 -3173 204 206 0 0 chr2 13409087 13409121 -237278733 + (TTG)n Simple_repeat Simple_repeat 2 35 0 659 185 7 44 chr2 13409344 13409479 -237278375 - FLAM_C SINE Alu -3 130 1 2055 132 63 17 chr2 13409560 13409908 -237277946 + THE1B LTR MaLR 1 364 0 201 322 51 94 chr2 13409975 13410230 -237277624 + L2 LINE L2 2685 2928 -386 387 222 85 59 chr2 13410647 13410800 -237277054 + L1MEc LINE L1 43 199 -6197 546 113 0 0 chr2 13411013 13411093 -237276761 + MADE1 DNA Mariner 1 80 0 212 280 0 0 chr2 13411673 13411723 -237276131 - L2 LINE L2 -15 3298 3249 651 141 7 40 chr2 13411754 13411903 -237275951 + L1MA9 LINE L1 6169 6312 0 555 286 93 88 chr2 13411923 13412310 -237275544 - LTR41 LTR ERVL -6 767 375 368 282 27 18 chr2 13412310 13412420 -237275434 - MER81 DNA DNA 0 114 4 555 286 93 88 chr2 13412420 13412580 -237275274 - LTR41 LTR ERVL -398 375 217 430 290 47 31 chr2 13413563 13413756 -237274098 - MIR SINE MIR -15 247 52 353 299 51 16 chr2 13414116 13414370 -237273484 + L1ME LINE L1 5562 5824 -297 5674 143 13 7 chr2 13414411 13415599 -237272255 + L1PB1 LINE L1 4956 6149 -2 258 272 39 10 chr2 13415710 13415813 -237272041 - MER5C DNA MER1_type -1 323 218 222 234 287 0 chr2 13415839 13415933 -237271921 - MER5C DNA MER1_type -200 124 4 359 254 146 0 chr2 13416654 13416764 -237271090 + MLT1H1 LTR MaLR 37 162 -393 2589 183 19 10 chr2 13416881 13417362 -237270492 - LTR45B LTR ERV1 0 489 5 222 363 101 50 chr2 13417471 13418270 -237269584 + L2 LINE L2 2206 3053 -219 617 209 105 0 chr2 13418514 13418735 -237269119 + L1M4 LINE L1 5122 5363 -802 271 240 0 0 chr2 13418750 13418800 -237269054 - L1M4b LINE L1 -6797 62 13 205 182 45 0 chr2 13418984 13419028 -237268826 + T-rich Low_complexity Low_complexity 2 47 0 405 276 22 77 chr2 13419732 13419913 -237267941 - MIR SINE MIR -13 249 79 25 0 0 0 chr2 13421205 13421230 -237266624 + AT_rich Low_complexity Low_complexity 1 25 0 809 168 0 0 chr2 13421230 13421373 -237266481 - L1MA4 LINE L1 -9 6291 6149 1364 48 0 5 chr2 13421373 13421586 -237266268 - L1P3 LINE L1 -715 5439 5228 5240 53 12 0 chr2 13421586 13422245 -237265609 + L1PA8 LINE L1 5502 6172 0 8200 178 25 41 chr2 13422253 13424457 -237263397 + L1M1 LINE L1 16 2859 -4706 2302 138 3 3 chr2 13424448 13424817 -237263037 + L1MA3 LINE L1 5484 5852 -453 * 1133 122 5 70 chr2 13424811 13424987 -237262867 - L1M1 LINE L1 -487 5813 5652 * 2140 153 3 27 chr2 13424987 13425360 -237262494 - THE1B LTR MaLR 0 364 1 1133 122 5 70 chr2 13425360 13425396 -237262458 - L1M1 LINE L1 -648 5652 5615 462 327 48 24 chr2 13425515 13425763 -237262091 - MIR SINE MIR -1 261 8 1847 162 3 3 chr2 13426215 13426524 -237261330 + AluSx SINE Alu 1 309 -3 24 53 0 0 chr2 13427250 13427288 -237260566 + AT_rich Low_complexity Low_complexity 1 38 0 2206 81 3 17 chr2 13427820 13428118 -237259736 + AluY SINE Alu 1 294 -17 383 139 28 14 chr2 13428537 13428609 -237259245 - L1MB1 LINE L1 -1 6167 6095 777 133 0 21 chr2 13428609 13428752 -237259102 - L1MB1 LINE L1 -3 6165 6026 202 316 51 0 chr2 13429307 13429405 -237258449 - MIR SINE MIR -47 215 113 295 326 0 11 chr2 13430027 13430119 -237257735 - MLT1I LTR MaLR -305 104 14 956 300 58 40 chr2 13430409 13430963 -237256891 - L1ME LINE L1 -5380 690 127 297 231 42 106 chr2 13431454 13431762 -237256092 - MER110A LTR ERV1 -104 364 39 249 267 171 48 chr2 13434390 13434536 -237253318 + MIR SINE MIR 58 221 -41 1606 210 3 31 chr2 13434925 13435278 -237252576 + MER2 DNA MER2_type 2 344 0 385 244 8 34 chr2 13435750 13435869 -237251985 + MLT1K LTR MaLR 463 578 -10 2142 109 3 0 chr2 13436095 13436388 -237251466 + AluSx SINE Alu 1 294 -18 226 287 197 8 chr2 13436901 13437023 -237250831 - L2 LINE L2 -7 3306 3162 254 335 34 34 chr2 13438782 13439021 -237248833 + L1MEc LINE L1 692 930 -5466 7603 30 0 0 chr2 13439034 13440355 -237247499 + L1PA3 LINE L1 4875 6195 0 272 274 73 50 chr2 13440425 13440742 -237247112 + L1MEc LINE L1 952 1275 -4940 296 131 0 48 chr2 13440799 13440883 -237246971 + (TC)n Simple_repeat Simple_repeat 1 80 0 21 0 0 0 chr2 13442362 13442383 -237245471 + AT_rich Low_complexity Low_complexity 1 21 0 1159 269 180 27 chr2 13443217 13443767 -237244087 - MER76 LTR ERV -54 634 1 208 294 11 167 chr2 13444387 13444567 -237243287 - MIR SINE MIR -43 219 68 21 0 0 0 chr2 13444937 13444958 -237242896 + AT_rich Low_complexity Low_complexity 1 21 0 246 200 50 17 chr2 13445421 13445481 -237242373 + MIR SINE MIR 135 196 -66 3009 79 49 14 chr2 13445534 13445574 -237242280 - MLT2A1 LTR ERVL 0 444 407 252 59 0 0 chr2 13445574 13445608 -237242246 + (TA)n Simple_repeat Simple_repeat 2 35 0 3009 79 49 14 chr2 13445608 13445996 -237241858 - MLT2A1 LTR ERVL -37 407 1 228 352 134 32 chr2 13446567 13446911 -237240943 + L2 LINE L2 2444 2822 -492 2015 131 13 0 chr2 13447637 13447935 -237239919 + AluSx SINE Alu 6 307 -5 296 261 155 70 chr2 13450857 13450999 -237236855 + L2 LINE L2 3158 3311 -2 280 304 130 22 chr2 13451070 13451254 -237236600 + L2 LINE L2 1396 1599 -1715 241 306 82 53 chr2 13452142 13452312 -237235542 - MIR SINE MIR -18 244 70 1425 123 20 20 chr2 13452471 13452724 -237235130 - L1MA5A LINE L1 -2 6295 6043 26 93 0 0 chr2 13453131 13453206 -237234648 + AT_rich Low_complexity Low_complexity 1 75 0 2016 125 0 16 chr2 13453342 13453669 -237234185 + AluSx SINE Alu 1 322 0 264 207 46 23 chr2 13453847 13453934 -237233920 - L1MB7 LINE L1 -9 6175 6087 329 235 82 0 chr2 13454156 13454254 -237233600 - MIR SINE MIR -46 216 111 13763 179 37 24 chr2 13454300 13454443 -237233411 + L1MA3 LINE L1 18 158 -7566 5839 18 0 0 chr2 13454443 13455115 -237232739 + L1PA3 LINE L1 5481 6152 -3 13763 179 37 24 chr2 13455115 13462151 -237225703 + L1MA3 LINE L1 158 7724 0 677 316 179 12 chr2 13462313 13462816 -237225038 + L2 LINE L2 1777 2363 -951 195 162 0 0 chr2 13463008 13463045 -237224809 + CT-rich Low_complexity Low_complexity 2 38 0 238 281 74 66 chr2 13463320 13463441 -237224413 + L2 LINE L2 2362 2483 -831 1759 140 4 7 chr2 13463445 13463717 -237224137 - AluSx SINE Alu -6 306 36 2023 150 0 0 chr2 13463724 13464064 -237223790 - L1MA5 LINE L1 -2 6940 6601 742 182 0 27 chr2 13464064 13464212 -237223642 - L1MA5 LINE L1 -873 5915 5772 * 4377 227 55 30 chr2 13464211 13465632 -237222222 - L1MA5 LINE L1 -2488 4300 2844 2540 231 210 41 chr2 13465649 13467010 -237220844 - L1MA5 LINE L1 -3991 2798 1212 1683 304 55 25 chr2 13467100 13467734 -237220120 - L1MA5 LINE L1 -6132 657 5 251 374 103 33 chr2 13467793 13468478 -237219376 + L2 LINE L2 2554 3287 -26 9941 124 34 6 chr2 13468482 13468940 -237218914 + THE1C-int LTR MaLR 2 446 -1134 2011 133 3 0 chr2 13468940 13469234 -237218620 + AluSg SINE Alu 1 295 -15 9941 124 34 6 chr2 13469234 13470311 -237217543 + THE1C-int LTR MaLR 446 1580 0 1629 138 57 81 chr2 13470311 13470695 -237217159 + THE1C LTR MaLR 1 375 0 1113 205 12 101 chr2 13471092 13471428 -237216426 + MLT1E3 LTR MaLR 319 624 0 24 0 0 0 chr2 13471545 13471569 -237216285 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 13472023 13472044 -237215810 + AT_rich Low_complexity Low_complexity 1 21 0 351 78 0 0 chr2 13472592 13472643 -237215211 + (TG)n Simple_repeat Simple_repeat 1 51 0 273 296 0 0 chr2 13472820 13472901 -237214953 + MLT1A2 LTR MaLR 7 87 -287 * 352 148 0 0 chr2 13472899 13472953 -237214901 + MLT1A2 LTR MaLR 321 374 0 475 303 88 8 chr2 13473450 13473701 -237214153 - HAL1 LINE L1 -5 2502 2232 642 260 68 41 chr2 13473860 13474079 -237213775 - MIR SINE MIR -36 226 2 335 296 132 6 chr2 13474113 13474272 -237213582 - HAL1 LINE L1 -475 2032 1854 332 378 58 18 chr2 13474409 13474634 -237213220 - HAL1 LINE L1 -1594 913 680 587 271 28 11 chr2 13474766 13474943 -237212911 - MLT1A1 LTR MaLR 0 365 186 1548 256 59 18 chr2 13475125 13475750 -237212104 - L1M4 LINE L1 -1214 4932 4282 210 176 0 0 chr2 13475860 13475894 -237211960 + T-rich Low_complexity Low_complexity 1 34 0 376 198 22 44 chr2 13475894 13476076 -237211778 - L1M4 LINE L1 -2884 3262 3085 788 349 30 0 chr2 13476211 13476512 -237211342 - L2 LINE L2 -988 2326 2017 310 356 33 58 chr2 13476540 13476815 -237211039 + MLT1H1 LTR MaLR 31 298 -257 195 100 0 0 chr2 13476818 13476848 -237211006 + (TG)n Simple_repeat Simple_repeat 1 30 0 380 287 25 0 chr2 13476964 13477086 -237210768 - L1MEd LINE L1 -5993 126 2 251 289 70 9 chr2 13477097 13477211 -237210643 + MIR SINE MIR 87 207 -55 236 381 12 0 chr2 13478381 13478465 -237209389 - MIR SINE MIR -140 122 38 219 125 0 0 chr2 13478627 13478667 -237209187 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr2 13479374 13479403 -237208451 + AT_rich Low_complexity Low_complexity 1 29 0 431 83 0 0 chr2 13479997 13480057 -237207797 + L1PBa LINE L1 1276 1335 -5528 219 288 64 56 chr2 13480246 13480371 -237207483 + MIR SINE MIR 31 156 -106 332 304 177 41 chr2 13480395 13480813 -237207041 - MLT1H LTR MaLR -2 547 73 215 253 107 0 chr2 13481463 13481538 -237206316 + MIR SINE MIR 47 129 -133 1177 158 113 25 chr2 13481597 13481837 -237206017 + MSTA LTR MaLR 1 261 -167 3023 40 3 3 chr2 13481837 13482208 -237205646 + L1PA3 LINE L1 4104 4474 -1672 7534 31 39 1 chr2 13482308 13483951 -237203903 + L1PA3 LINE L1 4472 6152 -3 971 121 145 0 chr2 13483981 13484147 -237203707 + MSTA LTR MaLR 239 428 0 2490 284 24 25 chr2 13484547 13485372 -237202482 + L1MB7 LINE L1 54 877 -5665 2394 244 29 39 chr2 13485371 13486228 -237201626 + L1MB7 LINE L1 4640 5488 -1156 * 283 215 46 15 chr2 13486228 13486358 -237201496 + (TTAAA)n Simple_repeat Simple_repeat 1 134 0 3516 196 51 6 chr2 13486358 13487266 -237200588 + L1MB7 LINE L1 5724 6674 -8 324 339 9 0 chr2 13487769 13487881 -237199973 + L2 LINE L2 2167 2279 -1035 181 217 0 43 chr2 13488628 13488674 -237199180 + MIR SINE MIR 152 195 -67 28 71 0 0 chr2 13490528 13490584 -237197270 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 13491077 13491100 -237196754 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 13491670 13491695 -237196159 + AT_rich Low_complexity Low_complexity 1 25 0 666 111 0 10 chr2 13491710 13491809 -237196045 + MER4A LTR ERV1 1 98 -566 2341 114 2 96 chr2 13491809 13492255 -237195599 + MER4A LTR ERV1 261 664 0 248 325 88 31 chr2 13492426 13492586 -237195268 + MIR SINE MIR 13 181 -81 1771 174 18 0 chr2 13492596 13492929 -237194925 + L1MA4 LINE L1 5936 6274 -26 466 347 6 6 chr2 13493503 13493676 -237194178 - MER5B DNA MER1_type 0 178 6 2603 130 9 25 chr2 13493876 13494314 -237193540 + MER57B LTR ERV1 1 431 -3 4087 155 24 6 chr2 13494317 13494980 -237192874 + MER57B-int LTR ERV1 1 675 -6862 * 4164 174 49 15 chr2 13494974 13496327 -237191527 + MER57B-int LTR ERV1 288 1775 -4171 1114 101 10 8 chr2 13496314 13496487 -237191367 + MER57B-int LTR ERV1 1503 2017 -3929 * 254 91 68 0 chr2 13496463 13496507 -237191347 + MER57B-int LTR ERV1 2167 2213 -3733 * 14317 167 91 61 chr2 13496495 13498217 -237189637 + MER57B-int LTR ERV1 3336 5005 -2532 2189 90 0 13 chr2 13498217 13498518 -237189336 + AluSg SINE Alu 14 310 0 14317 167 91 61 chr2 13498518 13500501 -237187353 + MER57B-int LTR ERV1 5005 7151 -386 706 118 31 31 chr2 13500501 13500628 -237187226 + LTR54B LTR ERV1 5 131 -367 1436 121 121 0 chr2 13500628 13500859 -237186995 + MER57B-int LTR ERV1 7279 7537 0 2756 105 16 23 chr2 13500859 13501296 -237186558 + MER57B LTR ERV1 1 434 0 32 43 0 0 chr2 13501445 13501491 -237186363 + AT_rich Low_complexity Low_complexity 1 46 0 777 212 6 24 chr2 13501495 13501665 -237186189 + AluJo SINE Alu 5 171 -141 379 326 98 19 chr2 13501730 13502180 -237185674 - MLT2E LTR ERVL -74 554 42 433 280 83 38 chr2 13502257 13503210 -237184644 + L1ME3A LINE L1 5072 6090 -80 1933 49 23 102 chr2 13503300 13503630 -237184224 + AluY SINE Alu 1 306 0 244 307 88 18 chr2 13503855 13503969 -237183885 + L2 LINE L2 3015 3136 -177 775 257 5 0 chr2 13503989 13504176 -237183678 + Tigger6a DNA MER2_type 2 189 -894 * 2226 213 46 28 chr2 13504169 13504751 -237183103 + Tigger6a DNA MER2_type 425 1017 -66 985 331 110 49 chr2 13504941 13505721 -237182133 - L2 LINE L2 -431 2883 2031 5004 24 0 3 chr2 13505721 13506309 -237181545 + L1PA3 LINE L1 5570 6155 0 985 331 110 49 chr2 13506309 13506502 -237181352 - L2 LINE L2 -1283 2031 1851 330 224 8 24 chr2 13506510 13506635 -237181219 - L1MEc LINE L1 -4130 2266 2144 1801 203 129 27 chr2 13506636 13507154 -237180700 - L1MC3 LINE L1 -16 7769 7199 1243 254 40 55 chr2 13507142 13507689 -237180165 - L1M4 LINE L1 -1143 5003 4465 * 383 83 97 42 chr2 13507980 13508052 -237179802 + L1PB4 LINE L1 6074 6149 -7 22 0 0 0 chr2 13508270 13508292 -237179562 + AT_rich Low_complexity Low_complexity 1 22 0 193 300 60 40 chr2 13508433 13508533 -237179321 + MIR SINE MIR 10 111 -151 1743 261 63 54 chr2 13508917 13509352 -237178502 - L1ME1 LINE L1 -2 6164 5718 252 0 0 0 chr2 13509352 13509380 -237178474 + (TG)n Simple_repeat Simple_repeat 2 29 0 1743 261 63 54 chr2 13509380 13509706 -237178148 - L1ME1 LINE L1 -448 5718 5396 501 283 94 5 chr2 13509812 13510035 -237177819 - L1ME1 LINE L1 -748 5398 5156 687 206 70 45 chr2 13510040 13510102 -237177752 - L1ME1 LINE L1 -1435 4711 4652 1211 254 56 58 chr2 13510102 13510606 -237177248 - MLT1D LTR MaLR -2 503 1 687 206 70 45 chr2 13510606 13510829 -237177025 - L1ME1 LINE L1 -1494 4652 4419 215 260 0 41 chr2 13511225 13511298 -237176556 + CT-rich Low_complexity Low_complexity 4 73 0 22 99 0 0 chr2 13512918 13512989 -237174865 + AT_rich Low_complexity Low_complexity 1 71 0 21 36 0 0 chr2 13513097 13513125 -237174729 + AT_rich Low_complexity Low_complexity 1 28 0 203 375 23 16 chr2 13514735 13514863 -237172991 - L3 LINE CR1 -105 1472 1344 2378 58 0 55 chr2 13515191 13515516 -237172338 - AluY SINE Alu -4 307 1 21 0 0 0 chr2 13517222 13517243 -237170611 + AT_rich Low_complexity Low_complexity 1 21 0 203 311 9 9 chr2 13517274 13517380 -237170474 + (TA)n Simple_repeat Simple_repeat 2 107 0 234 211 0 0 chr2 13517380 13517432 -237170422 - L1MC4 LINE L1 -1339 6703 6652 193 355 27 0 chr2 13517499 13517609 -237170245 - MIR SINE MIR -110 152 40 4200 187 38 68 chr2 13518222 13518576 -237169278 - L1 LINE L1 -1055 5091 4728 7431 35 0 0 chr2 13518576 13519676 -237168178 - L1PA3 LINE L1 0 6155 5093 4200 187 38 68 chr2 13519676 13519972 -237167882 - L1 LINE L1 -1418 4728 4425 1882 156 7 3 chr2 13519972 13520279 -237167575 - AluSx SINE Alu 0 312 5 4200 187 38 68 chr2 13520279 13520758 -237167096 - L1 LINE L1 -1721 4425 3995 545 144 10 0 chr2 13520886 13520990 -237166864 + (CA)n Simple_repeat Simple_repeat 1 105 0 224 363 118 15 chr2 13521294 13521429 -237166425 + L2 LINE L2 3165 3313 0 29 0 0 0 chr2 13521575 13521604 -237166250 + AT_rich Low_complexity Low_complexity 1 29 0 217 281 31 0 chr2 13522212 13522276 -237165578 + MIR SINE MIR 76 141 -121 396 0 0 0 chr2 13522327 13522371 -237165483 + (CA)n Simple_repeat Simple_repeat 2 45 0 1657 195 10 0 chr2 13522384 13522691 -237165163 + AluJb SINE Alu 1 310 -2 6657 18 0 0 chr2 13523601 13524365 -237163489 - L1PA4 LINE L1 -8 6147 5384 5692 29 0 1 chr2 13524363 13525055 -237162799 + L1PA4 LINE L1 4704 5394 -752 * 240 315 0 22 chr2 13525454 13525546 -237162308 + GA-rich Low_complexity Low_complexity 3 92 0 2183 142 6 6 chr2 13526316 13526676 -237161178 + MER46B DNA MER2_type 2 236 0 226 264 73 36 chr2 13527325 13527435 -237160419 - MER103 DNA DNA -10 156 43 1606 199 3 7 chr2 13527443 13527735 -237160119 - AluJo SINE Alu -18 294 4 22 0 0 0 chr2 13528507 13528529 -237159325 + AT_rich Low_complexity Low_complexity 1 22 0 235 266 81 73 chr2 13529212 13529336 -237158518 - MIR SINE MIR -64 144 20 227 225 0 38 chr2 13529370 13529450 -237158404 + CT-rich Low_complexity Low_complexity 2 78 0 4256 160 16 27 chr2 13529477 13529807 -237158047 + L1PB4 LINE L1 5363 5695 -461 2115 110 3 0 chr2 13529807 13530107 -237157747 + AluSg SINE Alu 1 301 -9 4256 160 16 27 chr2 13530107 13530578 -237157276 + L1PB4 LINE L1 5695 6155 -1 2125 116 0 0 chr2 13530586 13530878 -237156976 + AluSx SINE Alu 1 292 -20 1316 273 113 20 chr2 13530895 13531716 -237156138 - L1MEc LINE L1 -3131 3084 2148 198 0 0 0 chr2 13531716 13531738 -237156116 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1316 273 113 20 chr2 13531738 13532055 -237155799 - L1MEc LINE L1 -4067 2148 1862 362 175 62 0 chr2 13532073 13532153 -237155701 - L1MB4 LINE L1 0 6180 6096 1068 153 0 0 chr2 13532268 13532454 -237155400 - AluSq SINE Alu 0 314 129 26 88 0 0 chr2 13533023 13533091 -237154763 + AT_rich Low_complexity Low_complexity 1 68 0 260 312 0 32 chr2 13533616 13533709 -237154145 + MIR3 SINE MIR 67 156 -52 6394 220 41 20 chr2 13533968 13536925 -237150929 - L1MA4 LINE L1 -6 7713 4658 1766 236 42 33 chr2 13536931 13537752 -237150102 - L1MA4 LINE L1 -3726 3839 3015 842 265 58 22 chr2 13537736 13538147 -237149707 - L1MEc LINE L1 -2786 3429 3004 * 4064 198 20 70 chr2 13538162 13539079 -237148775 + L1MA9 LINE L1 4874 5690 -622 336 24 0 0 chr2 13539079 13539120 -237148734 + (CA)n Simple_repeat Simple_repeat 2 42 0 4064 198 20 70 chr2 13539120 13539714 -237148140 + L1MA9 LINE L1 5690 6312 0 34 0 0 0 chr2 13539718 13539752 -237148102 + AT_rich Low_complexity Low_complexity 1 34 0 789 307 83 30 chr2 13539756 13540458 -237147396 - L1MEc LINE L1 -4591 1805 1041 2274 105 0 0 chr2 13540458 13540763 -237147091 - AluSx SINE Alu -7 305 1 789 307 83 30 chr2 13540763 13540982 -237146872 - L1MEc LINE L1 -5355 1041 835 386 367 52 39 chr2 13541070 13541528 -237146326 - L1MEc LINE L1 -5711 685 222 28 0 0 0 chr2 13541718 13541746 -237146108 + AT_rich Low_complexity Low_complexity 1 28 0 227 299 188 0 chr2 13542303 13542420 -237145434 + MIR SINE MIR 35 173 -89 2368 72 0 0 chr2 13543317 13543623 -237144231 - AluY SINE Alu -5 306 1 198 320 39 68 chr2 13544391 13544494 -237143360 + MIR3 SINE MIR 15 114 -94 2297 44 17 7 chr2 13544529 13544823 -237143031 + AluY SINE Alu 1 297 -14 239 305 145 15 chr2 13545133 13545264 -237142590 - L2 LINE L2 -8 3305 3158 332 319 0 0 chr2 13545273 13545364 -237142490 + L1MC4 LINE L1 6613 6703 -1339 * 359 289 0 0 chr2 13545284 13545374 -237142480 - L1MC4 LINE L1 -1339 6703 6614 696 269 152 63 chr2 13545392 13545546 -237142308 - L2 LINE L2 -134 3179 3040 1819 112 29 4 chr2 13545546 13545822 -237142032 - AluSx SINE Alu -17 295 13 696 269 152 63 chr2 13545822 13546225 -237141629 - L2 LINE L2 -273 3040 2608 422 319 70 14 chr2 13547349 13547562 -237140292 - MLT1G LTR MaLR -12 578 354 359 297 17 80 chr2 13547840 13548015 -237139839 - L2 LINE L2 -4 3309 3146 744 337 239 22 chr2 13548134 13549272 -237138582 - L2 LINE L2 -339 2975 1591 2163 102 6 6 chr2 13549469 13549782 -237138072 + AluSp SINE Alu 1 313 0 438 126 133 106 chr2 13550141 13550292 -237137562 - L1MA4 LINE L1 0 6300 6146 24 0 0 70 chr2 13550919 13550962 -237136892 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 13550991 13551019 -237136835 + AT_rich Low_complexity Low_complexity 1 28 0 229 307 0 0 chr2 13551032 13551120 -237136734 - L1M4 LINE L1 -1439 4707 4620 654 285 35 59 chr2 13551704 13551960 -237135894 + MIR SINE MIR 13 262 0 24 0 0 0 chr2 13553870 13553894 -237133960 + AT_rich Low_complexity Low_complexity 1 24 0 795 225 221 28 chr2 13553912 13554072 -237133782 + L1MC5 LINE L1 6693 6821 -1140 1968 110 7 21 chr2 13554072 13554363 -237133491 + AluSq SINE Alu 1 287 -26 795 225 221 28 chr2 13554363 13554660 -237133194 + L1MC5 LINE L1 6821 7238 -723 255 114 0 0 chr2 13557627 13557671 -237130183 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 405 181 0 0 chr2 13557930 13558013 -237129841 - AluJ/FRAM SINE Alu -9 303 221 1884 156 33 33 chr2 13559283 13559617 -237128237 - MER1B DNA MER1_type -5 334 1 399 284 24 8 chr2 13559867 13559994 -237127860 - HsTC2 DNA Tc2 0 1900 1772 453 284 27 7 chr2 13560159 13560307 -237127547 - HsTC2 DNA Tc2 -217 1681 1531 474 315 0 0 chr2 13560511 13560638 -237127216 - HsTC2 DNA Tc2 -1750 148 22 21 0 0 0 chr2 13560993 13561014 -237126840 + AT_rich Low_complexity Low_complexity 1 21 0 607 194 45 8 chr2 13561233 13561367 -237126487 - MIR SINE MIR 0 262 124 232 375 14 28 chr2 13561459 13561603 -237126251 + MIR SINE MIR 3 144 -118 3586 280 103 14 chr2 13561609 13562032 -237125822 + L1PB1 LINE L1 5 389 -5752 216 0 0 0 chr2 13562032 13562056 -237125798 + (GA)n Simple_repeat Simple_repeat 2 25 0 3586 280 103 14 chr2 13562056 13562887 -237124967 + L1PB1 LINE L1 389 1371 -4770 406 280 59 72 chr2 13562889 13563048 -237124806 + FAM SINE Alu 1 149 -26 353 254 0 9 chr2 13563062 13563172 -237124682 + L1PB1 LINE L1 1391 1499 -4642 2374 138 14 0 chr2 13563174 13563530 -237124324 - THE1B LTR MaLR 0 364 4 9319 120 66 12 chr2 13563533 13565032 -237122822 - THE1B-int LTR MaLR 0 1580 1 2316 127 25 6 chr2 13565034 13565389 -237122465 - THE1B LTR MaLR -2 362 1 499 230 62 82 chr2 13565411 13565592 -237122262 + L1PB1 LINE L1 1504 1670 -4519 * 5072 219 11 12 chr2 13565588 13566809 -237121045 - L1PB1 LINE L1 -1871 4339 3121 * 5299 171 22 32 chr2 13566805 13567060 -237120794 + L1PB1 LINE L1 4359 4615 -1600 1868 148 67 17 chr2 13567060 13567417 -237120437 + THE1C LTR MaLR 1 375 0 5299 171 22 32 chr2 13567417 13569039 -237118815 + L1PB1 LINE L1 4615 6215 0 1552 262 81 46 chr2 13569105 13569328 -237118526 + L1MA9 LINE L1 2690 2904 -4661 999 196 5 0 chr2 13569328 13569542 -237118312 + L1MA4 LINE L1 6077 6291 -9 1552 262 81 46 chr2 13569542 13570442 -237117412 + L1MA9 LINE L1 2904 3848 -3717 4629 62 13 0 chr2 13570449 13571047 -237116807 + L1PA7 LINE L1 5548 6153 -1 9696 210 38 57 chr2 13571437 13572825 -237115029 + L1MA9 LINE L1 3842 5256 -2475 273 235 0 0 chr2 13572825 13572876 -237114978 + MLT1A1 LTR MaLR 52 102 -263 9696 210 38 57 chr2 13572876 13574758 -237113096 + L1MA9 LINE L1 5256 7090 -641 2196 204 51 8 chr2 13574774 13575096 -237112758 + L1MA9 LINE L1 7195 7549 -182 240 35 0 0 chr2 13575096 13575125 -237112729 + (TA)n Simple_repeat Simple_repeat 1 29 0 2196 204 51 8 chr2 13575125 13575316 -237112538 + L1MA9 LINE L1 7549 7730 -1 282 257 54 49 chr2 13575484 13575616 -237112238 + MIR SINE MIR 19 151 -77 227 267 22 22 chr2 13577432 13577522 -237110332 - L1MC4 LINE L1 -1339 6703 6614 291 314 31 38 chr2 13577757 13577916 -237109938 + MIR SINE MIR 104 261 -1 21 0 0 0 chr2 13577921 13577942 -237109912 + AT_rich Low_complexity Low_complexity 1 21 0 514 212 76 15 chr2 13578337 13578473 -237109381 + L1ME1 LINE L1 5783 5906 -260 1524 228 0 3 chr2 13578486 13578793 -237109061 + MLT1A1 LTR MaLR 60 365 0 805 236 25 21 chr2 13578794 13579031 -237108823 + L1ME1 LINE L1 5913 6150 -16 335 235 12 148 chr2 13579447 13579609 -237108245 - MIR SINE MIR -103 159 20 724 301 125 21 chr2 13580135 13580471 -237107383 + MER45C DNA AcHobo 4 374 -579 375 237 13 0 chr2 13580614 13580690 -237107164 + MER45C DNA AcHobo 877 953 0 22 0 0 0 chr2 13581199 13581221 -237106633 + AT_rich Low_complexity Low_complexity 1 22 0 382 162 0 0 chr2 13581224 13581298 -237106556 - L1MA5 LINE L1 0 6300 6227 319 137 0 0 chr2 13581312 13581363 -237106491 + L1MA5 LINE L1 6035 6085 -215 722 290 35 5 chr2 13581413 13581613 -237106241 - MIR SINE MIR -37 225 20 4859 162 23 59 chr2 13581693 13582803 -237105051 - MER11C LTR ERVK 0 1071 1 1088 142 64 37 chr2 13582803 13583021 -237104833 + LTR51 LTR ERV1 8 231 -440 475 275 99 28 chr2 13583086 13583297 -237104557 - MIR SINE MIR -13 249 24 431 287 82 0 chr2 13583408 13583530 -237104324 - MER63 DNA MER1_type -78 758 1 630 101 0 0 chr2 13583726 13583835 -237104019 + (G)n Simple_repeat Simple_repeat 1 109 0 223 269 10 29 chr2 13583835 13583939 -237103915 + G-rich Low_complexity Low_complexity 1 102 0 1944 213 161 41 chr2 13584201 13584882 -237102972 - LTR1B LTR ERV1 -75 751 1 21 57 0 0 chr2 13585175 13585210 -237102644 + AT_rich Low_complexity Low_complexity 1 35 0 3021 68 3 3 chr2 13585270 13585652 -237102202 - MLT2A1 LTR ERVL -62 382 1 633 247 80 65 chr2 13585756 13586080 -237101774 + L1ME1 LINE L1 3794 4122 -2024 5783 32 0 1 chr2 13586080 13586766 -237101088 + L1PA3 LINE L1 5468 6152 -3 359 242 189 14 chr2 13586829 13587110 -237100744 + L1ME1 LINE L1 4114 4443 -1703 * 443 190 74 25 chr2 13587094 13587215 -237100639 + L1MA9 LINE L1 6161 6287 -25 * 516 261 40 76 chr2 13587213 13587438 -237100416 + L1ME1 LINE L1 4422 4633 -1513 1799 108 3 35 chr2 13587438 13587752 -237100102 + AluSx SINE Alu 4 307 -5 516 261 40 76 chr2 13587752 13587855 -237099999 + L1ME1 LINE L1 4633 4738 -1408 1305 284 38 30 chr2 13587881 13588701 -237099153 + L1ME1 LINE L1 5004 5843 -323 413 314 223 18 chr2 13588930 13589548 -237098306 - L2 LINE L2 -767 2547 1803 245 314 70 29 chr2 13590537 13590709 -237097145 - MIR SINE MIR -47 215 37 201 293 0 0 chr2 13591013 13591071 -237096783 + (TGAA)n Simple_repeat Simple_repeat 4 61 0 1523 139 0 0 chr2 13592171 13592401 -237095453 - AluSq SINE Alu -83 230 1 184 372 89 26 chr2 13592430 13592621 -237095233 + L2 LINE L2 2470 2672 -642 215 318 187 0 chr2 13593010 13593117 -237094737 + L2 LINE L2 2915 3041 -272 363 240 67 95 chr2 13593119 13593298 -237094556 - MLT1E2 LTR MaLR -238 267 91 311 189 32 63 chr2 13593309 13593404 -237094450 - L1MC4 LINE L1 -1339 6703 6612 296 18 0 70 chr2 13593404 13593461 -237094393 + (TA)n Simple_repeat Simple_repeat 2 54 0 350 194 0 122 chr2 13593479 13593577 -237094277 - MLT1E2 LTR MaLR -540 86 1 697 209 0 0 chr2 13593626 13593741 -237094113 - FLAM_A SINE Alu -18 115 1 191 146 24 0 chr2 13593769 13593810 -237094044 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 1071 233 124 18 chr2 13594396 13594791 -237093063 + L1ME LINE L1 323 759 -5311 611 221 0 27 chr2 13594862 13595011 -237092843 - L1 LINE L1 -1455 4691 4547 1516 246 72 17 chr2 13597351 13597770 -237090084 - MLT1F LTR MaLR -30 512 71 549 94 250 0 chr2 13597790 13597886 -237089968 - THE1B-int LTR MaLR -1460 120 1 2045 120 50 36 chr2 13597894 13598251 -237089603 - THE1B LTR MaLR 0 364 3 261 319 0 0 chr2 13598253 13598325 -237089529 - MLT1F LTR MaLR -467 75 4 5320 72 7 1 chr2 13598531 13599240 -237088614 + L1PA7 LINE L1 5424 6136 -18 180 351 61 8 chr2 13600663 13600794 -237087060 - MIR3 SINE MIR -34 174 37 4045 203 30 18 chr2 13601460 13602757 -237085097 - L1MB8 LINE L1 -6 6172 4858 36 62 0 0 chr2 13602917 13602981 -237084873 + AT_rich Low_complexity Low_complexity 1 64 0 501 188 30 0 chr2 13603489 13603590 -237084264 + MLT1J LTR MaLR 72 175 -336 213 39 0 0 chr2 13603699 13603725 -237084129 + (GA)n Simple_repeat Simple_repeat 1 26 0 485 222 40 16 chr2 13603725 13603851 -237084003 + L1MC4 LINE L1 7913 8041 -1 1764 288 83 19 chr2 13603955 13604151 -237083703 - L1MC4a LINE L1 -7 7801 7619 2077 109 0 50 chr2 13604151 13604472 -237083382 - AluSx SINE Alu -5 307 3 1764 288 83 19 chr2 13604472 13605078 -237082776 - L1MC4a LINE L1 -189 7619 6947 29 28 0 0 chr2 13606307 13606343 -237081511 + AT_rich Low_complexity Low_complexity 1 36 0 210 196 20 0 chr2 13606666 13606717 -237081137 + T-rich Low_complexity Low_complexity 3 54 0 1816 136 47 17 chr2 13606930 13607231 -237080623 + AluSx SINE Alu 3 312 0 22 0 0 0 chr2 13607349 13607371 -237080483 + AT_rich Low_complexity Low_complexity 1 22 0 257 346 165 16 chr2 13608496 13608739 -237079115 + L2 LINE L2 1168 1446 -1868 428 246 331 0 chr2 13608808 13608950 -237078904 - MER5A DNA MER1_type 0 189 1 452 346 61 65 chr2 13609134 13609951 -237077903 + L2 LINE L2 1758 2571 -743 751 316 101 72 chr2 13610066 13610777 -237077077 - L1MEd LINE L1 -4890 1229 493 2211 105 0 3 chr2 13610777 13611081 -237076773 + AluSg SINE Alu 1 303 -7 751 316 101 72 chr2 13611081 13611132 -237076722 - L1MEd LINE L1 -5626 493 445 260 357 0 0 chr2 13611200 13611284 -237076570 + L2 LINE L2 3227 3310 -3 454 66 13 13 chr2 13611860 13611936 -237075918 + (TA)n Simple_repeat Simple_repeat 1 76 0 800 263 216 11 chr2 13612303 13612664 -237075190 - LTR33A LTR ERVL 0 523 89 256 91 0 36 chr2 13613255 13613310 -237074544 + (TA)n Simple_repeat Simple_repeat 1 53 0 2079 162 25 133 chr2 13613436 13614065 -237073789 - L1MC3 LINE L1 0 7785 7225 515 238 0 0 chr2 13614068 13614190 -237073664 - L1MC3 LINE L1 -693 7092 6971 34 0 0 0 chr2 13614191 13614225 -237073629 + AT_rich Low_complexity Low_complexity 1 34 0 264 266 81 16 chr2 13614236 13614360 -237073494 - L1ME LINE L1 -435 5686 5555 212 291 158 9 chr2 13615478 13615588 -237072266 + MIR SINE MIR 30 154 -54 203 254 32 16 chr2 13617191 13617254 -237070600 + MIR SINE MIR 91 154 -108 186 87 65 0 chr2 13617624 13617670 -237070184 + (TA)n Simple_repeat Simple_repeat 1 49 0 22 0 0 0 chr2 13619099 13619121 -237068733 + AT_rich Low_complexity Low_complexity 1 22 0 1622 123 54 19 chr2 13619259 13619520 -237068334 - AluSx SINE Alu -18 294 25 1305 284 38 30 chr2 13619679 13620499 -237067355 - L1ME1 LINE L1 -323 5777 4938 518 252 46 82 chr2 13620525 13620628 -237067226 - L1ME1 LINE L1 -1408 4672 4567 2110 115 0 3 chr2 13620628 13620933 -237066921 - AluSx SINE Alu -5 307 4 518 252 46 82 chr2 13620933 13621158 -237066696 - L1ME1 LINE L1 -1513 4567 4356 443 190 74 25 chr2 13621156 13621277 -237066577 - L1MA9 LINE L1 -25 6287 6161 * 359 242 189 14 chr2 13621261 13621542 -237066312 - L1ME1 LINE L1 -1703 4377 4048 * 5813 32 0 0 chr2 13621605 13622290 -237065564 - L1PA3 LINE L1 -3 6152 5468 645 246 80 65 chr2 13622289 13622614 -237065240 - L1ME1 LINE L1 -2023 4057 3728 3021 68 3 3 chr2 13622718 13623100 -237064754 + MLT2A1 LTR ERVL 1 382 -62 1221 305 60 56 chr2 13623100 13624782 -237063072 - L1ME1 LINE L1 -4485 1776 57 900 256 98 14 chr2 13624832 13625179 -237062675 - L1M4 LINE L1 -1745 4401 4026 438 254 113 11 chr2 13625163 13625340 -237062514 - L1MEc LINE L1 -3696 2519 2325 * 1443 285 42 63 chr2 13625390 13626523 -237061331 - L1MEc LINE L1 -4842 1554 445 7383 164 18 11 chr2 13626547 13627179 -237060675 + HSMAR2 DNA Mariner 2 628 -674 1223 113 24 38 chr2 13627179 13627392 -237060462 - L1PA15 LINE L1 -3 6162 5953 7383 164 18 11 chr2 13627392 13628050 -237059804 + HSMAR2 DNA Mariner 628 1301 -1 869 176 11 27 chr2 13628094 13628282 -237059572 - L1MA7 LINE L1 -178 6113 5929 692 124 55 7 chr2 13628282 13628419 -237059435 + L1MA7 LINE L1 6132 6283 -8 1854 151 7 7 chr2 13629363 13629684 -237058170 + AluSx SINE Alu 2 312 0 207 167 0 0 chr2 13629915 13629951 -237057903 - MER5B DNA MER1_type -8 170 135 514 304 27 41 chr2 13630209 13630429 -237057425 + MIR SINE MIR 2 218 -44 2208 212 47 8 chr2 13630984 13631512 -237056342 + L1MB8 LINE L1 5624 6172 -6 347 298 48 0 chr2 13631744 13631868 -237055986 - MLT1G1 LTR MaLR 0 595 466 289 310 0 11 chr2 13632568 13632655 -237055199 + L2 LINE L2 3228 3313 0 321 15 75 15 chr2 13632752 13632819 -237055035 + (TA)n Simple_repeat Simple_repeat 2 72 0 803 244 157 37 chr2 13632870 13633247 -237054607 - MSTB LTR MaLR -4 422 1 183 156 0 0 chr2 13633937 13633969 -237053885 + (TATATG)n Simple_repeat Simple_repeat 6 37 0 4537 119 9 4 chr2 13634012 13634703 -237053151 + L1PA10 LINE L1 4730 6162 -1 4537 110 11 0 chr2 13634703 13635360 -237052494 + L1PA10 LINE L1 5504 6167 -1 593 264 53 94 chr2 13635362 13635817 -237052037 + L1MEc LINE L1 1533 1968 -4428 444 303 57 84 chr2 13635882 13636358 -237051496 + L1MEc LINE L1 1749 2211 -4185 267 217 0 0 chr2 13636367 13636427 -237051427 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1786 250 36 7 chr2 13636548 13637107 -237050747 + L1MB8 LINE L1 4477 5051 -1095 301 192 6 84 chr2 13637128 13637295 -237050559 + (TA)n Simple_repeat Simple_repeat 1 154 0 3191 216 44 22 chr2 13637345 13637937 -237049917 + L1MB8 LINE L1 5126 5753 -425 1559 183 3 7 chr2 13637937 13638270 -237049584 + AluJb SINE Alu 1 332 0 3191 216 44 22 chr2 13638270 13638671 -237049183 + L1MB8 LINE L1 5753 6144 -34 377 222 68 17 chr2 13638684 13638801 -237049053 + L1M4 LINE L1 5616 5738 -440 261 86 0 0 chr2 13638802 13638837 -237049017 + AluSp SINE Alu 136 170 -133 574 263 75 22 chr2 13638852 13639116 -237048738 - L1M4 LINE L1 -432 5742 5468 232 414 39 0 chr2 13639216 13639320 -237048534 - L2 LINE L2 -4 3268 3161 1123 219 19 4 chr2 13641157 13641422 -237046432 - L1MB8 LINE L1 -191 5987 5719 22 0 0 0 chr2 13641583 13641605 -237046249 + AT_rich Low_complexity Low_complexity 1 22 0 313 24 24 0 chr2 13642179 13642220 -237045634 + MADE1 DNA Mariner 2 43 -37 496 302 64 42 chr2 13642250 13642515 -237045339 + MLT1K LTR MaLR 306 576 -12 28 48 0 0 chr2 13643057 13643099 -237044755 + AT_rich Low_complexity Low_complexity 1 42 0 235 267 0 27 chr2 13643181 13643256 -237044598 + (TATG)n Simple_repeat Simple_repeat 4 76 0 465 231 41 0 chr2 13643288 13643409 -237044445 + L1ME1 LINE L1 6016 6141 -25 181 281 188 10 chr2 13643902 13643998 -237043856 + MIR SINE MIR 133 245 -17 * 269 286 0 44 chr2 13643996 13644087 -237043767 - MIR SINE MIR -115 147 61 1954 132 0 0 chr2 13644477 13644795 -237043059 + AluSg SINE Alu 3 320 0 181 196 36 0 chr2 13644873 13644929 -237042925 + CT-rich Low_complexity Low_complexity 4 61 0 214 215 31 54 chr2 13645395 13645525 -237042329 + (TAAA)n Simple_repeat Simple_repeat 2 128 0 25 65 0 0 chr2 13645567 13645613 -237042241 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr2 13646510 13646545 -237041309 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 13646620 13646650 -237041204 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 13646669 13646691 -237041163 + AT_rich Low_complexity Low_complexity 1 22 0 1435 179 195 8 chr2 13647226 13647605 -237040249 + LTR47A LTR ERVL 1 450 -2 991 140 7 0 chr2 13647943 13648086 -237039768 + AluSq SINE Alu 145 288 -25 584 273 82 62 chr2 13648652 13648908 -237038946 - MIR SINE MIR 0 262 2 2467 66 0 0 chr2 13649047 13649352 -237038502 - AluY SINE Alu -6 305 1 474 270 112 18 chr2 13649554 13649750 -237038104 + MLT1H1 LTR MaLR 32 213 -329 318 289 44 14 chr2 13650061 13650330 -237037524 - L1MCa LINE L1 -4938 1669 1194 426 264 26 80 chr2 13650716 13651027 -237036827 - HAL1b LINE L1 -45 1303 1010 22 35 0 0 chr2 13651048 13651077 -237036777 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 13651230 13651251 -237036603 + AT_rich Low_complexity Low_complexity 1 21 0 1822 110 0 0 chr2 13651308 13651563 -237036291 - AluSx SINE Alu 0 312 58 225 0 0 0 chr2 13651597 13651622 -237036232 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 181 244 0 0 chr2 13652089 13652130 -237035724 - L2 LINE L2 -9 3304 3264 275 140 34 39 chr2 13653984 13654163 -237033691 + (TA)n Simple_repeat Simple_repeat 2 179 0 243 184 29 39 chr2 13654176 13654279 -237033575 + (TA)n Simple_repeat Simple_repeat 2 103 0 478 212 29 29 chr2 13654546 13654683 -237033171 + L1M4b LINE L1 1353 1489 -5370 409 243 129 124 chr2 13654726 13655113 -237032741 - MLT2B1 LTR ERVL 0 520 132 228 207 43 129 chr2 13655242 13655382 -237032472 + L2 LINE L2 3088 3215 -98 1325 170 0 5 chr2 13655413 13655637 -237032217 - AluJo SINE Alu -5 307 85 266 369 0 0 chr2 13655641 13655725 -237032129 + L2 LINE L2 3189 3272 0 285 75 0 0 chr2 13656214 13656254 -237031600 + (TG)n Simple_repeat Simple_repeat 1 40 0 254 372 32 0 chr2 13657663 13657757 -237030097 - MIR SINE MIR -145 117 21 234 333 155 0 chr2 13658408 13658537 -237029317 + MIR3 SINE MIR 43 191 -17 728 272 5 0 chr2 13658586 13658788 -237029066 + MER3 DNA MER1_type 2 204 -5 229 316 158 11 chr2 13658899 13658994 -237028860 + MIR3 SINE MIR 9 117 -91 569 306 70 8 chr2 13659033 13659275 -237028579 + L1M4 LINE L1 9 265 -6277 15011 144 16 101 chr2 13659481 13662882 -237024972 + L1PA7 LINE L1 12 3122 -3024 11894 90 5 0 chr2 13662882 13662947 -237024907 + L1PA7 LINE L1 3606 3669 -2485 354 23 0 0 chr2 13662947 13662990 -237024864 + (CA)n Simple_repeat Simple_repeat 2 44 0 11894 90 5 0 chr2 13662990 13665407 -237022447 + L1PA7 LINE L1 3669 6151 -3 24 0 0 0 chr2 13665407 13665431 -237022423 + AT_rich Low_complexity Low_complexity 1 24 0 1169 274 3 8 chr2 13665533 13665906 -237021948 + L1M4 LINE L1 2635 3005 -3639 * 1778 203 104 10 chr2 13665902 13666410 -237021444 + L1M4 LINE L1 829 1384 -5158 1178 137 16 143 chr2 13666422 13666737 -237021117 + L1MA9 LINE L1 6038 6312 0 1773 246 40 71 chr2 13666781 13667357 -237020497 + L1M4 LINE L1 2539 3131 -3513 183 80 0 0 chr2 13667357 13667382 -237020472 + (TG)n Simple_repeat Simple_repeat 2 26 0 1773 246 40 71 chr2 13667382 13667847 -237020007 + L1M4 LINE L1 3131 3545 -3099 2174 106 0 10 chr2 13667847 13668150 -237019704 - AluSc SINE Alu -5 304 5 1773 246 40 71 chr2 13668150 13668192 -237019662 + L1M4 LINE L1 3545 3587 -3057 474 387 11 7 chr2 13668192 13668453 -237019401 - L2 LINE L2 -301 3012 2753 2076 207 20 4 chr2 13668945 13669438 -237018416 - L1 LINE L1 -2205 3941 3441 * 2438 220 7 19 chr2 13669428 13669968 -237017886 + L1MA9 LINE L1 5630 6163 -149 854 239 37 0 chr2 13669976 13670164 -237017690 + AluJo SINE Alu 95 289 -23 622 205 35 19 chr2 13670168 13670483 -237017371 + GA-rich Low_complexity Low_complexity 1 320 0 312 250 0 0 chr2 13670502 13670578 -237017276 + L1MA10 LINE L1 6183 6258 -76 485 291 7 27 chr2 13671138 13671286 -237016568 + MIR SINE MIR 7 151 -111 25 51 0 0 chr2 13671311 13671350 -237016504 + AT_rich Low_complexity Low_complexity 1 39 0 2157 81 0 3 chr2 13671651 13671971 -237015883 - AluY SINE Alu 0 319 1 23 0 0 0 chr2 13672703 13672726 -237015128 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 13673069 13673093 -237014761 + AT_rich Low_complexity Low_complexity 1 24 0 236 317 18 72 chr2 13674105 13674272 -237013582 + MIR SINE MIR 82 239 -23 2243 93 0 22 chr2 13674288 13674601 -237013253 - AluSc SINE Alu -3 306 1 237 211 141 0 chr2 13674942 13675013 -237012841 + L1P1 LINE L1 5617 5697 -458 310 293 47 13 chr2 13675128 13675356 -237012498 + L1MC4a LINE L1 5712 5950 -171 22 0 0 0 chr2 13676137 13676159 -237011695 + AT_rich Low_complexity Low_complexity 1 22 0 221 301 14 0 chr2 13676295 13676368 -237011486 + MIR SINE MIR 189 262 0 6047 78 1 2 chr2 13676868 13677661 -237010193 + L1P LINE L1 3 794 -5352 43267 41 4 3 chr2 13677822 13683963 -237003891 + L1PA4 LINE L1 8 6152 -3 24 53 0 0 chr2 13684908 13684946 -237002908 + AT_rich Low_complexity Low_complexity 1 38 0 205 293 20 61 chr2 13685307 13685406 -237002448 - MIR3 SINE MIR -21 187 93 487 229 62 22 chr2 13685557 13685736 -237002118 - L1MD3 LINE L1 -1 7994 7809 1065 211 21 0 chr2 13685738 13685980 -237001874 + L1MB5 LINE L1 5928 6174 0 262 355 70 40 chr2 13686002 13686374 -237001480 - L2 LINE L2 -688 2626 2244 1831 167 128 13 chr2 13686666 13687050 -237000804 + MSTA LTR MaLR 1 428 0 233 261 63 54 chr2 13687521 13687632 -237000222 + L1ME LINE L1 4532 4643 -1503 373 296 101 77 chr2 13687849 13688142 -236999712 + L1ME LINE L1 4782 5094 -1052 2224 105 0 16 chr2 13688142 13688457 -236999397 - AluSq SINE Alu -3 310 1 373 296 101 77 chr2 13688457 13688669 -236999185 + L1ME LINE L1 5094 5299 -847 262 289 63 19 chr2 13688729 13688888 -236998966 + L1ME LINE L1 5621 5786 -335 24 53 0 0 chr2 13688905 13688943 -236998911 + AT_rich Low_complexity Low_complexity 1 38 0 266 356 0 0 chr2 13689062 13689208 -236998646 + (TA)n Simple_repeat Simple_repeat 1 146 0 368 296 106 53 chr2 13689624 13689831 -236998023 + L1M4 LINE L1 3635 3860 -2286 2351 83 0 0 chr2 13689831 13690133 -236997721 + AluY SINE Alu 1 302 -9 368 296 106 53 chr2 13690133 13690189 -236997665 + L1M4 LINE L1 3860 3912 -2234 343 311 22 11 chr2 13690770 13690950 -236996904 + L1MEd LINE L1 903 1084 -5035 26 0 0 0 chr2 13691241 13691267 -236996587 + AT_rich Low_complexity Low_complexity 1 26 0 272 315 28 6 chr2 13692574 13692755 -236995099 + L1M4 LINE L1 3759 3943 -2203 393 333 51 46 chr2 13693720 13693957 -236993897 + L3 LINE CR1 609 846 -731 2625 33 0 0 chr2 13694429 13694732 -236993122 - AluY SINE Alu -8 303 1 1162 37 0 0 chr2 13694733 13694867 -236992987 - AluY SINE Alu -177 134 1 22 0 0 0 chr2 13695945 13695967 -236991887 + AT_rich Low_complexity Low_complexity 1 22 0 294 357 29 19 chr2 13695980 13696190 -236991664 + MIR SINE MIR 35 246 -16 22 0 0 0 chr2 13696413 13696435 -236991419 + AT_rich Low_complexity Low_complexity 1 22 0 349 165 23 65 chr2 13696874 13697003 -236990851 - MER2 DNA MER2_type -136 209 22 1077 277 39 10 chr2 13697133 13697440 -236990414 + LTR53 LTR ERVL 194 509 -10 196 268 85 49 chr2 13698350 13698432 -236989422 - L2 LINE L2 -2 3311 3227 243 0 0 0 chr2 13699783 13699810 -236988044 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 2169 130 0 0 chr2 13700364 13700671 -236987183 - AluSc SINE Alu -2 307 1 452 283 22 60 chr2 13701356 13701540 -236986314 + MER8 DNA MER2_type 1 177 -62 383 162 14 27 chr2 13701573 13701647 -236986207 - Tigger2 DNA MER2_type -2645 73 1 319 136 2 2 chr2 13701685 13701736 -236986118 + Alu SINE Alu 2 46 -256 1484 205 10 13 chr2 13701946 13702248 -236985606 - AluJb SINE Alu -11 301 1 186 366 14 0 chr2 13702521 13702592 -236985262 + MIR SINE MIR 64 135 -127 206 301 221 28 chr2 13703300 13703513 -236984341 - MIR SINE MIR -6 256 3 261 305 53 33 chr2 13703576 13703727 -236984127 + MIR SINE MIR 109 262 0 200 300 90 10 chr2 13705101 13705201 -236982653 + MIR SINE MIR 91 198 -64 26 30 0 0 chr2 13705201 13705234 -236982620 + AT_rich Low_complexity Low_complexity 1 33 0 414 131 51 51 chr2 13705349 13705669 -236982185 + (TTAAA)n Simple_repeat Simple_repeat 1 320 0 347 187 66 18 chr2 13705600 13705766 -236982088 + (TTTAA)n Simple_repeat Simple_repeat 1 174 0 * 1491 218 26 12 chr2 13705832 13706171 -236981683 + MLT1A1 LTR MaLR 6 349 -16 1549 141 146 68 chr2 13706171 13706568 -236981286 - MSTA LTR MaLR 0 428 1 2033 167 55 40 chr2 13706661 13707081 -236980773 - MSTB LTR MaLR 0 426 1 180 278 37 74 chr2 13708671 13708779 -236979075 + L2 LINE L2 3160 3263 -9 186 318 0 0 chr2 13709773 13709836 -236978018 + MIR SINE MIR 62 124 -84 228 317 85 55 chr2 13710294 13710458 -236977396 + MIR SINE MIR 87 255 -7 30 0 0 0 chr2 13710593 13710623 -236977231 + AT_rich Low_complexity Low_complexity 1 30 0 767 195 0 16 chr2 13710859 13711044 -236976810 + L1MA7 LINE L1 6109 6290 -1 1338 205 114 40 chr2 13711577 13711928 -236975926 + MLT1B LTR MaLR 4 380 -10 2292 114 42 28 chr2 13711994 13712353 -236975501 - THE1B LTR MaLR 0 364 1 650 219 11 3 chr2 13713090 13713433 -236974421 + GA-rich Low_complexity Low_complexity 1 346 0 305 232 28 46 chr2 13713551 13713659 -236974195 - MLT1H1 LTR MaLR -2 540 448 266 277 10 29 chr2 13713841 13713944 -236973910 - MLT1I LTR MaLR -260 175 70 2066 181 7 20 chr2 13714322 13714726 -236973128 + Tigger1 DNA MER2_type 1 399 -2019 21 0 0 0 chr2 13715831 13715852 -236972002 + AT_rich Low_complexity Low_complexity 1 21 0 210 279 68 104 chr2 13716353 13716392 -236971462 - MIR SINE MIR -51 157 118 6435 25 1 0 chr2 13716392 13717144 -236970710 + L1PA3 LINE L1 5401 6153 -2 210 279 68 104 chr2 13717144 13717283 -236970571 - MIR SINE MIR -90 118 16 256 224 24 71 chr2 13717554 13717614 -236970240 - MIR SINE MIR -3 259 203 1274 232 54 77 chr2 13717614 13718131 -236969723 + MLT1D LTR MaLR 1 505 0 256 224 24 71 chr2 13718131 13718155 -236969699 - MIR SINE MIR -59 203 179 222 274 0 16 chr2 13718155 13718217 -236969637 - MIR SINE MIR -198 64 4 250 328 50 8 chr2 13718907 13719026 -236968828 + L1ME4a LINE L1 5483 5606 -515 303 264 129 31 chr2 13719612 13719775 -236968079 + L1ME4a LINE L1 5927 6105 -16 2271 131 37 0 chr2 13721348 13721699 -236966155 + THE1B LTR MaLR 1 364 0 192 333 36 36 chr2 13721735 13721873 -236965981 + MIR SINE MIR 20 157 -105 2420 153 11 52 chr2 13722079 13722537 -236965317 - Tigger2 DNA MER2_type 0 2718 2280 387 203 0 0 chr2 13722535 13722604 -236965250 - Tigger2 DNA MER2_type -2649 69 1 * 450 251 82 55 chr2 13722651 13722906 -236964948 - L1MC4 LINE L1 -32 8010 7749 24 32 0 0 chr2 13722965 13722996 -236964858 + AT_rich Low_complexity Low_complexity 1 31 0 325 308 97 26 chr2 13723006 13723233 -236964621 - L1MC4 LINE L1 -462 7580 7338 768 97 0 18 chr2 13723235 13723349 -236964505 + FRAM SINE Alu 60 171 -5 338 278 166 22 chr2 13724243 13724466 -236963388 + L2 LINE L2 2108 2362 -952 297 377 45 0 chr2 13728096 13728250 -236959604 - MIR3 SINE MIR -3 205 45 242 328 98 25 chr2 13728552 13728674 -236959180 + MIR SINE MIR 17 147 -61 209 306 157 0 chr2 13728694 13728815 -236959039 - MIR SINE MIR 0 262 123 760 293 45 4 chr2 13728838 13729084 -236958770 + MIR SINE MIR 2 257 -5 778 257 71 7 chr2 13729418 13729698 -236958156 + L1MC4 LINE L1 7381 7678 -364 1826 155 0 20 chr2 13729953 13730249 -236957605 + AluSx SINE Alu 1 290 -22 1791 231 20 39 chr2 13730363 13730874 -236956980 - MLT1D LTR MaLR -4 501 1 226 327 36 45 chr2 13731085 13731135 -236956719 + L2 LINE L2 3157 3206 -66 1534 238 79 25 chr2 13731135 13731614 -236956240 + MLT1D LTR MaLR 1 505 0 226 327 36 45 chr2 13731614 13731673 -236956181 + L2 LINE L2 3206 3265 -7 256 250 0 0 chr2 13731675 13731727 -236956127 + GA-rich Low_complexity Low_complexity 4 55 0 1109 165 6 0 chr2 13733386 13733568 -236954286 + Tigger1 DNA MER2_type 2236 2418 0 2193 61 27 24 chr2 13734383 13734680 -236953174 + AluY SINE Alu 1 298 -13 256 272 12 12 chr2 13735758 13735839 -236952015 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 317 266 85 32 chr2 13735919 13736013 -236951841 + L2 LINE L2 3199 3297 -16 1326 254 87 33 chr2 13736182 13736905 -236950949 + L1M4 LINE L1 2402 3163 -2983 950 202 21 0 chr2 13736926 13737114 -236950740 + MLT1C LTR MaLR 276 467 0 314 296 0 0 chr2 13738492 13738590 -236949264 - MLT1-int LTR MaLR -1268 103 6 23 0 0 0 chr2 13739050 13739073 -236948781 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 13739388 13739414 -236948440 + AT_rich Low_complexity Low_complexity 1 26 0 297 0 0 0 chr2 13739470 13739503 -236948351 + (CA)n Simple_repeat Simple_repeat 2 34 0 2505 254 63 6 chr2 13739610 13740247 -236947607 + ERVL LTR ERVL 52 724 -5040 272 284 12 0 chr2 13740256 13740337 -236947517 - MLT1E LTR MaLR -452 141 60 6174 203 20 19 chr2 13740337 13741738 -236946116 - L1P LINE L1 -1679 4467 3065 777 215 50 20 chr2 13741774 13741974 -236945880 - MER3 DNA MER1_type 0 209 4 254 202 281 0 chr2 13742690 13742779 -236945075 + MIR SINE MIR 3 116 -146 2371 78 3 10 chr2 13742792 13743101 -236944753 + AluY SINE Alu 1 307 -4 237 254 0 0 chr2 13743221 13743280 -236944574 + (TTA)n Simple_repeat Simple_repeat 2 60 0 665 320 71 43 chr2 13743708 13744102 -236943752 + MLT1J LTR MaLR 1 405 -106 25 31 0 0 chr2 13744571 13744603 -236943251 + AT_rich Low_complexity Low_complexity 1 32 0 201 290 29 0 chr2 13744677 13744746 -236943108 + (TG)n Simple_repeat Simple_repeat 2 72 0 1129 224 76 7 chr2 13744767 13745070 -236942784 - MER2 DNA MER2_type -1 344 21 350 239 74 103 chr2 13745135 13745378 -236942476 - MER106B DNA MER1_type 0 1059 1 21 36 0 0 chr2 13745896 13745924 -236941930 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 13746295 13746323 -236941531 + AT_rich Low_complexity Low_complexity 1 28 0 291 343 17 35 chr2 13746456 13746628 -236941226 - MIR SINE MIR -74 188 20 284 347 62 34 chr2 13746782 13746958 -236940896 - MIR3 SINE MIR -9 199 19 1463 35 0 0 chr2 13747115 13747289 -236940565 + L1PA3 LINE L1 5978 6151 -4 1595 148 9 99 chr2 13747838 13748182 -236939672 + AluSp SINE Alu 1 313 0 23 68 0 0 chr2 13748183 13748227 -236939627 + AT_rich Low_complexity Low_complexity 1 44 0 1811 144 14 0 chr2 13748777 13749054 -236938800 - AluSp SINE Alu -30 283 3 985 194 0 30 chr2 13749064 13749265 -236938589 + MER3 DNA MER1_type 14 208 -1 365 318 5 78 chr2 13749576 13749768 -236938086 - MIR3 SINE MIR -1 207 30 204 67 0 0 chr2 13750986 13751016 -236936838 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 259 183 0 50 chr2 13752000 13752060 -236935794 - MLT2D LTR ERVL -2 518 462 335 169 14 0 chr2 13752083 13752154 -236935700 + GA-rich Low_complexity Low_complexity 1 72 0 1495 225 25 3 chr2 13752158 13752473 -236935381 - MLT2D LTR ERVL -89 325 4 323 350 62 46 chr2 13753115 13753355 -236934499 - L2 LINE L2 -830 2484 2241 520 293 27 0 chr2 13753860 13754007 -236933847 - MIR SINE MIR -46 216 66 21 36 0 0 chr2 13754292 13754320 -236933534 + AT_rich Low_complexity Low_complexity 1 28 0 9684 50 2 2 chr2 13755459 13756691 -236931163 - L1P LINE L1 -1089 5057 3825 7192 50 3 2 chr2 13756691 13757679 -236930175 + L1PA5 LINE L1 5166 6154 0 31 0 0 0 chr2 13757714 13757745 -236930109 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 13757754 13757778 -236930076 + AT_rich Low_complexity Low_complexity 1 24 0 1036 228 65 45 chr2 13757907 13758263 -236929591 - MLT1A1 LTR MaLR 0 365 3 216 360 171 17 chr2 13758356 13758531 -236929323 - L3 LINE CR1 -69 1508 1307 21 0 0 0 chr2 13758650 13758671 -236929183 + AT_rich Low_complexity Low_complexity 1 21 0 1224 276 123 31 chr2 13759131 13759765 -236928089 + L1M4 LINE L1 1106 1797 -4587 2121 135 36 14 chr2 13759869 13760225 -236927629 - THE1B LTR MaLR 0 364 1 3606 124 83 26 chr2 13760687 13761347 -236926507 - L1PA16 LINE L1 0 6166 5469 385 286 20 27 chr2 13763580 13763727 -236924127 - MIR SINE MIR -25 237 92 259 311 82 37 chr2 13764102 13764237 -236923617 + MIR SINE MIR 53 193 -69 457 355 70 4 chr2 13765366 13765608 -236922246 + MIR SINE MIR 2 259 -3 242 274 78 17 chr2 13765836 13766015 -236921839 - L1M4 LINE L1 -3568 2578 2389 541 277 10 20 chr2 13766048 13766250 -236921604 + L1M4 LINE L1 2961 3160 -3222 * 1003 279 132 25 chr2 13766244 13766826 -236921028 + L1M4 LINE L1 4549 5190 -1192 185 386 10 10 chr2 13767323 13767424 -236920430 + MIR SINE MIR 75 175 -87 581 294 111 67 chr2 13770184 13770528 -236917326 - L2 LINE L2 -3 3310 2952 345 144 39 39 chr2 13771260 13771413 -236916441 + (TA)n Simple_repeat Simple_repeat 2 154 0 339 280 84 71 chr2 13771694 13772286 -236915568 + L1M4 LINE L1 4456 5055 -1091 6644 54 0 53 chr2 13772347 13773365 -236914489 + L1PA6 LINE L1 5214 6181 0 438 319 92 8 chr2 13773420 13773777 -236914077 - L1ME4a LINE L1 -153 5968 5582 378 322 64 25 chr2 13775283 13775519 -236912335 - L1ME LINE L1 -303 5818 5574 243 0 0 0 chr2 13776597 13776624 -236911230 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1347 94 89 52 chr2 13777067 13777280 -236910574 - AluSq SINE Alu -18 295 75 384 216 162 48 chr2 13777346 13777513 -236910341 - L2 LINE L2 0 3313 3128 454 257 65 14 chr2 13777725 13777877 -236909977 + MIR SINE MIR 30 187 -66 425 309 28 46 chr2 13778266 13778483 -236909371 - MIR SINE MIR -3 259 47 516 242 11 54 chr2 13778731 13778917 -236908937 + MER96B DNA MER1_type? 1 178 -239 237 193 193 0 chr2 13778973 13779030 -236908824 - MER58A DNA MER1_type -31 76 9 3711 193 167 62 chr2 13779696 13780907 -236906947 + MER52A LTR ERV1 240 1512 -65 292 138 17 35 chr2 13780902 13780960 -236906894 + MER52C LTR ERV1 1222 1278 0 * 352 192 19 0 chr2 13781112 13781216 -236906638 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 244 279 59 73 chr2 13782990 13783194 -236904660 + LTR67 LTR ERVL 357 557 0 310 234 52 0 chr2 13783690 13783767 -236904087 - MER94 DNA DNA -53 81 1 351 0 0 0 chr2 13784035 13784074 -236903780 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 13784770 13784792 -236903062 + AT_rich Low_complexity Low_complexity 1 22 0 327 309 24 16 chr2 13785950 13786076 -236901778 - MIR SINE MIR -27 235 109 424 294 120 40 chr2 13786077 13786352 -236901502 + L2 LINE L2 3017 3313 0 390 345 48 62 chr2 13787098 13787388 -236900466 + L2 LINE L2 2987 3272 0 2236 105 3 19 chr2 13788636 13788951 -236898903 - AluSp SINE Alu -3 310 1 212 307 71 39 chr2 13789319 13789446 -236898408 - L2 LINE L2 -1 3312 3182 22 0 0 0 chr2 13789687 13789709 -236898145 + AT_rich Low_complexity Low_complexity 1 22 0 255 273 235 16 chr2 13789945 13790128 -236897726 + LTR16C LTR ERVL 236 458 -33 1011 315 36 8 chr2 13790503 13790868 -236896986 - LTR16A LTR ERVL 0 450 76 285 284 43 26 chr2 13791390 13791506 -236896348 + L2 LINE L2 2945 3062 -251 254 277 188 9 chr2 13791743 13791855 -236895999 + L2 LINE L2 3134 3265 -7 623 284 98 58 chr2 13793318 13793646 -236894208 - LTR67 LTR ERVL -10 547 207 220 109 18 36 chr2 13793880 13793935 -236893919 + (TCTCC)n Simple_repeat Simple_repeat 3 56 0 22 35 0 0 chr2 13795053 13795082 -236892772 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 13795610 13795654 -236892200 + AT_rich Low_complexity Low_complexity 1 44 0 1718 253 89 81 chr2 13795756 13795980 -236891874 + L1MC4 LINE L1 5706 5927 -1754 1169 265 95 55 chr2 13795980 13796547 -236891307 - MLT1E LTR MaLR 0 593 4 1718 253 89 81 chr2 13796547 13796601 -236891253 + L1MC4 LINE L1 5927 5979 -1702 336 64 0 0 chr2 13796601 13796648 -236891206 + (CA)n Simple_repeat Simple_repeat 1 47 0 1718 253 89 81 chr2 13796648 13797291 -236890563 + L1MC4 LINE L1 5979 6615 -1066 2354 93 0 0 chr2 13797291 13797601 -236890253 - AluY SINE Alu -1 310 1 1718 253 89 81 chr2 13797601 13798871 -236888983 + L1MC4 LINE L1 6615 7681 0 483 87 0 0 chr2 13799884 13799953 -236887901 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 225 213 120 0 chr2 13799956 13800031 -236887823 + L1MC4a LINE L1 7724 7807 -1 237 234 0 0 chr2 13800187 13800234 -236887620 + GA-rich Low_complexity Low_complexity 1 47 0 299 253 114 44 chr2 13800452 13800610 -236887244 + HAL1 LINE L1 1501 1669 -838 1565 199 107 135 chr2 13801200 13802170 -236885684 + LTR1B LTR ERV1 1 1020 0 234 294 65 22 chr2 13802201 13802293 -236885561 + L2 LINE L2 3137 3232 -40 2041 49 7 6 chr2 13802646 13802933 -236884921 - L1PA3 LINE L1 -248 5907 5660 2103 65 4 0 chr2 13802935 13803211 -236884643 + L1PA3 LINE L1 5879 6155 0 386 293 68 14 chr2 13803621 13803768 -236884086 - MIR SINE MIR -13 249 95 189 351 95 7 chr2 13805235 13805383 -236882471 + MIR SINE MIR 30 190 -72 2665 3 3 0 chr2 13806796 13807085 -236880769 + AluYa5 SINE Alu 1 290 -21 1175 111 5 50 chr2 13807188 13807386 -236880468 - L1PA12 LINE L1 -292 5876 5688 5160 203 14 8 chr2 13807396 13808796 -236879058 - L1PA12 LINE L1 -564 5601 4193 1180 147 0 0 chr2 13808800 13808977 -236878877 + THE1B LTR MaLR 1 177 -187 308 343 105 37 chr2 13809005 13809358 -236878496 - L1MC/D LINE L1 -444 5798 5422 286 238 131 79 chr2 13809786 13810000 -236877854 - L3 LINE CR1 -175 1402 1178 535 323 53 8 chr2 13811497 13811760 -236876094 - LTR16A1 LTR ERVL -11 446 172 234 331 49 25 chr2 13811923 13812086 -236875768 - MIR3 SINE MIR -5 203 37 2652 178 4 13 chr2 13812506 13812967 -236874887 - LTR32 LTR ERVL 0 471 15 215 379 35 17 chr2 13813530 13813646 -236874208 + L3 LINE CR1 1230 1347 -230 2023 145 85 18 chr2 13813672 13814073 -236873781 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 13815475 13815496 -236872358 + AT_rich Low_complexity Low_complexity 1 21 0 1415 273 18 32 chr2 13815830 13816614 -236871240 + L1ME2 LINE L1 2999 3746 -2400 1298 221 158 9 chr2 13816647 13816969 -236870885 + MSTB LTR MaLR 1 370 -56 1111 60 7 0 chr2 13816984 13817133 -236870721 - L1PA4 LINE L1 -3 6152 6003 462 73 59 0 chr2 13817162 13817230 -236870624 + MSTB LTR MaLR 357 428 0 949 212 174 22 chr2 13817231 13817553 -236870301 + L1ME2 LINE L1 3785 4171 -1975 267 31 0 0 chr2 13817553 13817585 -236870269 + (TAA)n Simple_repeat Simple_repeat 2 33 0 949 212 174 22 chr2 13817585 13817630 -236870224 + L1ME2 LINE L1 4171 4208 -1938 1482 241 104 32 chr2 13817634 13818164 -236869690 + L1ME2 LINE L1 5586 6153 -11 2218 79 13 13 chr2 13818463 13818768 -236869086 + AluY SINE Alu 1 305 -6 288 384 30 45 chr2 13819181 13819379 -236868475 - MIR3 SINE MIR -6 202 8 333 0 0 0 chr2 13819434 13819471 -236868383 + (CA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr2 13819971 13819992 -236867862 + AT_rich Low_complexity Low_complexity 1 21 0 208 0 0 59 chr2 13820386 13820420 -236867434 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 3306 214 29 42 chr2 13822498 13823320 -236864534 + MER52A LTR ERV1 232 1736 -19 508 238 86 13 chr2 13823335 13823486 -236864368 - MLT1H LTR MaLR -375 174 13 210 293 24 0 chr2 13824296 13824378 -236863476 + (TTCA)n Simple_repeat Simple_repeat 4 87 0 25 0 0 0 chr2 13824645 13824670 -236863184 + AT_rich Low_complexity Low_complexity 1 25 0 6890 97 10 5 chr2 13824950 13826759 -236861095 + L1PA7 LINE L1 4350 6152 -2 480 202 190 11 chr2 13826919 13827163 -236860691 - L1ME2 LINE L1 -203 6030 5712 306 179 16 4 chr2 13827166 13827255 -236860599 - L1P4 LINE L1 -693 5473 5382 1970 252 67 46 chr2 13827271 13828034 -236859820 - L1ME2 LINE L1 -721 5514 4727 735 239 12 12 chr2 13828034 13828201 -236859653 + FAM SINE Alu 2 168 -7 1970 252 67 46 chr2 13828201 13828629 -236859225 - L1ME2 LINE L1 -1508 4727 4310 1234 117 9 72 chr2 13828632 13828855 -236858999 - AluSq SINE Alu 0 313 105 2307 252 65 72 chr2 13828857 13829065 -236858789 - L1ME2 LINE L1 -1932 4283 4075 2250 111 0 0 chr2 13829065 13829372 -236858482 - AluSx SINE Alu -5 307 1 2307 252 65 72 chr2 13829372 13829964 -236857890 - L1ME2 LINE L1 -2140 4075 3480 1881 161 3 0 chr2 13829964 13830262 -236857592 - AluJo SINE Alu -11 301 3 2307 252 65 72 chr2 13830262 13830541 -236857313 - L1ME2 LINE L1 -2735 3480 3201 387 41 0 0 chr2 13830541 13830590 -236857264 + (CA)n Simple_repeat Simple_repeat 2 50 0 1997 176 42 33 chr2 13830600 13831026 -236856828 + Tigger2a DNA MER2_type 2 431 -3 441 0 0 0 chr2 13831029 13831078 -236856776 + (TG)n Simple_repeat Simple_repeat 2 50 0 2307 252 65 72 chr2 13831078 13831457 -236856397 - L1ME2 LINE L1 -3025 3190 2818 975 288 48 6 chr2 13831463 13832084 -236855770 - L1ME2 LINE L1 -3622 2593 1989 944 273 107 38 chr2 13832128 13832948 -236854906 - L1ME2 LINE L1 -4485 1911 1035 2051 193 82 66 chr2 13832961 13833750 -236854104 - MER52A LTR ERV1 -810 945 1 2255 109 0 7 chr2 13834084 13834387 -236853467 - AluSg SINE Alu -9 301 1 245 319 0 28 chr2 13835971 13836043 -236851811 + MIR SINE MIR 51 120 -142 21 36 0 0 chr2 13836162 13836190 -236851664 + AT_rich Low_complexity Low_complexity 1 28 0 522 266 110 12 chr2 13836540 13836713 -236851141 - L2 LINE L2 0 3313 3124 4591 200 23 7 chr2 13837103 13838127 -236849727 + L1 LINE L1 3278 4318 -1828 1966 165 67 20 chr2 13840550 13840955 -236846899 - MSTA LTR MaLR 0 428 5 774 302 36 4 chr2 13840984 13841236 -236846618 + MIR SINE MIR 1 260 -2 643 206 65 13 chr2 13842338 13842493 -236845361 - MIR SINE MIR -37 225 63 248 131 81 19 chr2 13843584 13843744 -236844110 + (TA)n Simple_repeat Simple_repeat 2 171 0 181 191 52 7 chr2 13843755 13843891 -236843963 + (TA)n Simple_repeat Simple_repeat 2 143 0 217 350 106 34 chr2 13844072 13844309 -236843545 - L2 LINE L2 -204 3068 2815 1156 235 26 53 chr2 13845073 13845528 -236842326 - L1MDa LINE L1 -2105 4435 3993 571 233 101 13 chr2 13845561 13845720 -236842134 - FRAM SINE Alu 0 40 1 398 276 114 20 chr2 13845865 13846111 -236841743 - L1MDa LINE L1 -4009 2531 2263 257 258 104 112 chr2 13847119 13847308 -236840546 + LTR41 LTR ERVL 510 698 -75 1550 103 9 5 chr2 13847308 13847522 -236840332 - AluSc SINE Alu -12 297 83 257 258 104 112 chr2 13847522 13847592 -236840262 + LTR41 LTR ERVL 698 767 -6 3082 94 61 2 chr2 13847988 13848447 -236839407 - LTR19A LTR ERV1 0 486 1 1632 143 4 16 chr2 13849002 13849253 -236838601 + AluSx SINE Alu 50 297 -15 284 296 42 22 chr2 13849718 13849823 -236838031 + MIR SINE MIR 39 143 -76 348 24 0 0 chr2 13850536 13850577 -236837277 + (CA)n Simple_repeat Simple_repeat 1 41 0 496 290 105 0 chr2 13850683 13850893 -236836961 + MIR SINE MIR 17 252 -10 539 114 0 11 chr2 13852489 13852577 -236835277 + Tigger2 DNA MER2_type 2399 2485 -233 235 194 81 0 chr2 13852578 13852640 -236835214 - L1MA4 LINE L1 -5 6295 6229 518 200 30 0 chr2 13852640 13852740 -236835114 - U6 snRNA snRNA 0 107 5 738 158 70 6 chr2 13852744 13852915 -236834939 + Tigger2 DNA MER2_type 2473 2654 -64 971 150 0 0 chr2 13852920 13853073 -236834781 - L1PA13 LINE L1 -20 6143 5991 234 191 0 24 chr2 13853080 13853122 -236834732 + Tigger2 DNA MER2_type 2667 2707 -11 1468 246 30 15 chr2 13853791 13854070 -236833784 + MER63B DNA MER1_type 1 289 -773 2201 115 7 0 chr2 13854070 13854374 -236833480 - AluSq SINE Alu -7 306 1 1468 246 30 15 chr2 13854374 13854501 -236833353 + MER63B DNA MER1_type 289 413 -23 4861 148 19 6 chr2 13855068 13856924 -236830930 - L1PA15 LINE L1 -7 6158 4261 381 338 22 22 chr2 13856945 13857081 -236830773 - MIR3 SINE MIR -15 193 58 2024 128 0 10 chr2 13857180 13857478 -236830376 - AluSc SINE Alu -14 295 1 350 317 14 41 chr2 13858750 13858895 -236828959 + L2 LINE L2 3173 3313 0 341 93 35 35 chr2 13858900 13858986 -236828868 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 2158 128 3 10 chr2 13860150 13860462 -236827392 - AluSx SINE Alu -2 310 1 297 284 35 52 chr2 13860600 13860716 -236827138 + L2 LINE L2 3158 3271 -1 2127 143 0 0 chr2 13861065 13861373 -236826481 + AluSx SINE Alu 1 308 -4 258 321 22 44 chr2 13862796 13862933 -236824921 - L2 LINE L2 -213 3059 2926 282 318 88 7 chr2 13863472 13863620 -236824234 - MIR SINE MIR -68 194 35 1983 123 0 14 chr2 13864263 13864592 -236823262 + AluSx SINE Alu 1 325 0 224 246 94 70 chr2 13864620 13864791 -236823063 - MIR SINE MIR 0 262 88 244 314 0 0 chr2 13864871 13864941 -236822913 + MIR SINE MIR 85 154 -108 383 201 2 116 chr2 13865639 13865684 -236822170 + MSTC LTR MaLR 5 54 -342 2094 108 3 29 chr2 13865684 13865990 -236821864 + AluSq SINE Alu 1 298 -15 383 201 2 116 chr2 13865990 13866057 -236821797 + MSTC LTR MaLR 54 110 -286 200 355 78 27 chr2 13867092 13867348 -236820506 + L2 LINE L2 2951 3219 -94 182 272 74 62 chr2 13867367 13867448 -236820406 - MIR3 SINE MIR -17 191 110 259 377 44 6 chr2 13867728 13867887 -236819967 - MIR SINE MIR -12 250 86 248 300 75 17 chr2 13868600 13868720 -236819134 + MIR SINE MIR 81 207 -55 478 196 98 12 chr2 13868720 13868883 -236818971 - Charlie5 DNA MER1_type 0 2624 2448 186 43 0 0 chr2 13869322 13869345 -236818509 + (T)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr2 13869955 13869984 -236817870 + AT_rich Low_complexity Low_complexity 1 29 0 331 276 12 0 chr2 13870011 13870181 -236817673 + (TA)n Simple_repeat Simple_repeat 2 173 0 189 259 99 61 chr2 13870315 13870446 -236817408 + L2 LINE L2 2948 3083 -189 557 216 37 6 chr2 13870491 13870653 -236817201 - HsTC2 DNA Tc2 0 1900 1734 278 319 114 30 chr2 13870657 13870823 -236817031 - HsTC2 DNA Tc2 -1718 180 1 199 273 0 65 chr2 13871038 13871115 -236816739 + L2 LINE L2 3242 3313 0 711 164 40 109 chr2 13871958 13872159 -236815695 + MER5A DNA MER1_type 3 189 0 399 210 11 177 chr2 13872957 13873138 -236814716 + MER63 DNA MER1_type 7 783 -53 425 221 49 0 chr2 13873435 13873557 -236814297 + L1 LINE L1 4109 4236 -1910 204 109 36 18 chr2 13873629 13873684 -236814170 + (TA)n Simple_repeat Simple_repeat 1 56 0 3161 203 27 19 chr2 13873694 13874443 -236813411 + L1 LINE L1 4211 4965 -1181 658 212 0 0 chr2 13874444 13874562 -236813292 + Tigger7 DNA MER2_type 1 118 -615 466 261 119 54 chr2 13874846 13875325 -236812529 + MER34B LTR ERV1 6 565 0 306 211 11 84 chr2 13875326 13875421 -236812433 - MIR SINE MIR -101 161 74 6408 122 26 5 chr2 13875492 13876553 -236811301 + L1PBa LINE L1 1392 2475 -4388 363 44 0 0 chr2 13877258 13877303 -236810551 + (CA)n Simple_repeat Simple_repeat 2 46 0 361 350 145 14 chr2 13877531 13877882 -236809972 - L2 LINE L2 -1882 1432 1036 2807 246 48 14 chr2 13878042 13879014 -236808840 + L1MDa LINE L1 2546 3547 -2993 7089 45 7 6 chr2 13880623 13882272 -236805582 + L1PA4 LINE L1 4504 6155 0 1675 176 54 8 chr2 13882272 13882634 -236805220 + L1PB4 LINE L1 5769 6155 -1 610 338 107 13 chr2 13882638 13883023 -236804831 - ERVL LTR ERVL -948 4816 4396 22 0 0 0 chr2 13883228 13883250 -236804604 + AT_rich Low_complexity Low_complexity 1 22 0 307 312 175 7 chr2 13883450 13883604 -236804250 - LTR16C LTR ERVL -127 364 185 991 162 30 5 chr2 13883674 13883872 -236803982 - MER57B LTR ERV1 0 434 232 411 171 0 0 chr2 13885521 13885626 -236802228 + G-rich Low_complexity Low_complexity 1 105 0 280 304 33 0 chr2 13886553 13886645 -236801209 + MIR SINE MIR 109 203 -59 27 29 0 0 chr2 13886790 13886824 -236801030 + AT_rich Low_complexity Low_complexity 1 34 0 1742 237 86 0 chr2 13887720 13888176 -236799678 - MLT1D LTR MaLR -8 497 3 227 269 62 48 chr2 13888574 13888719 -236799135 + L2 LINE L2 2966 3112 -160 1582 209 94 30 chr2 13889240 13889708 -236798146 - Charlie1b DNA MER1_type -24 499 2 218 260 41 55 chr2 13890666 13890739 -236797115 - L2 LINE L2 -224 3048 2977 21 36 0 0 chr2 13891368 13891396 -236796458 + AT_rich Low_complexity Low_complexity 1 28 0 1360 124 0 0 chr2 13891396 13891606 -236796248 - L1MA1 LINE L1 0 6302 6093 638 217 121 24 chr2 13891871 13892037 -236795817 - MER101B LTR ERV1 -386 184 3 1612 200 113 45 chr2 13892865 13893472 -236794382 + LTR48B LTR ERV1 1 707 0 4111 196 66 39 chr2 13893492 13893686 -236794168 + L1MC3 LINE L1 6655 6842 -943 276 30 0 0 chr2 13893686 13893719 -236794135 + (GA)n Simple_repeat Simple_repeat 1 33 0 4111 196 66 39 chr2 13893719 13894122 -236793732 + L1MC3 LINE L1 6842 7232 -553 1206 209 90 11 chr2 13894122 13894399 -236793455 + AluJo SINE Alu 1 299 -3 4111 196 66 39 chr2 13894399 13894813 -236793041 + L1MC3 LINE L1 7232 7695 -90 373 215 0 0 chr2 13895922 13895987 -236791867 - AluJb SINE Alu -3 299 235 881 157 0 20 chr2 13895987 13896134 -236791720 - AluJb SINE Alu -168 144 1 1060 174 10 0 chr2 13896208 13896404 -236791450 + L1PBa LINE L1 3 200 -6663 755 144 0 0 chr2 13896406 13896524 -236791330 + L1PBa LINE L1 636 753 -6110 * 2537 100 22 0 chr2 13896513 13896883 -236790971 + L1PBa LINE L1 2309 2686 -4177 1091 217 13 0 chr2 13896986 13897216 -236790638 + L1MC1 LINE L1 6101 6333 0 230 284 60 0 chr2 13897993 13898060 -236789794 - L2 LINE L2 -35 3237 3167 1761 170 71 152 chr2 13898163 13898953 -236788901 + LTR8A LTR ERV1 2 727 0 21 0 0 0 chr2 13899442 13899463 -236788391 + AT_rich Low_complexity Low_complexity 1 21 0 4628 20 11 0 chr2 13901211 13901758 -236786096 + L1PA4 LINE L1 5601 6153 -2 198 278 22 56 chr2 13902123 13902213 -236785641 - MIR SINE MIR -123 139 53 192 294 106 0 chr2 13903206 13903291 -236784563 + MIR3 SINE MIR 90 183 -25 377 185 0 0 chr2 13904515 13904596 -236783258 - L1MB7 LINE L1 0 6184 6104 * 3054 236 7 15 chr2 13904593 13905319 -236782535 - L1MB8 LINE L1 -27 6151 5432 274 315 20 54 chr2 13905406 13905555 -236782299 + L1MC5 LINE L1 7751 7894 -67 307 304 33 0 chr2 13906494 13906586 -236781268 - MIR SINE MIR -83 125 31 2367 175 45 7 chr2 13906986 13907431 -236780423 + MLT1C LTR MaLR 4 465 -2 2021 141 0 3 chr2 13907747 13908045 -236779809 - AluSx SINE Alu -15 297 1 324 346 154 34 chr2 13908237 13908529 -236779325 - L3 LINE CR1 -852 725 399 210 338 13 13 chr2 13909811 13909888 -236777966 + MIR SINE MIR 47 123 -139 291 104 0 0 chr2 13909907 13909955 -236777899 + (TG)n Simple_repeat Simple_repeat 2 49 0 1484 165 11 15 chr2 13909999 13910271 -236777583 + AluJb SINE Alu 40 310 -2 240 368 75 11 chr2 13910427 13910601 -236777253 - MER5A DNA MER1_type -3 186 2 525 184 19 0 chr2 13912402 13912505 -236775349 + MER58 DNA MER1_type 2310 2414 -6 1042 206 12 74 chr2 13913106 13913363 -236774491 - MLT1A1 LTR MaLR -124 241 1 272 100 0 20 chr2 13913501 13913551 -236774303 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1064 163 0 16 chr2 13913559 13913749 -236774105 - AluYa5 SINE Alu -19 292 106 954 89 51 25 chr2 13913857 13914015 -236773839 + L1PA5 LINE L1 5932 6093 -61 406 267 41 0 chr2 13914032 13914178 -236773676 + (TATATG)n Simple_repeat Simple_repeat 3 154 0 728 54 0 0 chr2 13914181 13914274 -236773580 + L1PA5 LINE L1 6058 6150 -4 225 132 40 53 chr2 13914521 13914597 -236773257 + (TA)n Simple_repeat Simple_repeat 2 76 0 383 224 0 0 chr2 13914636 13914703 -236773151 - ORSL DNA AcHobo -208 67 1 204 395 12 0 chr2 13914710 13914796 -236773058 + L2 LINE L2 2967 3053 -219 321 208 0 0 chr2 13915441 13915518 -236772336 + (TA)n Simple_repeat Simple_repeat 1 77 0 333 222 17 131 chr2 13917324 13917385 -236770469 + MER69A DNA AcHobo 1 67 -2459 1723 119 119 0 chr2 13917385 13917653 -236770201 - AluSg SINE Alu 0 300 1 333 222 17 131 chr2 13917653 13917767 -236770087 + MER69A DNA AcHobo 67 156 -21 268 355 91 69 chr2 13917886 13918067 -236769787 + L2 LINE L2 2837 3013 -259 1995 115 20 14 chr2 13918067 13918363 -236769491 + AluSx SINE Alu 1 298 -14 268 355 91 69 chr2 13918363 13918589 -236769265 + L2 LINE L2 3013 3253 -19 380 314 29 58 chr2 13919105 13919242 -236768612 - L2 LINE L2 -7 3265 3133 2411 144 30 37 chr2 13919300 13919731 -236768123 - MSTC LTR MaLR 0 428 1 257 305 150 18 chr2 13919817 13919984 -236767870 - L2 LINE L2 -523 2791 2603 369 329 111 5 chr2 13920779 13920986 -236766868 + MIR SINE MIR 17 245 -17 337 316 34 26 chr2 13922287 13922404 -236765450 + MER5B DNA MER1_type 1 118 -60 387 232 19 13 chr2 13922506 13922661 -236765193 + (TATATG)n Simple_repeat Simple_repeat 3 158 0 2336 140 40 55 chr2 13922673 13923167 -236764687 + L1MA9 LINE L1 5821 6307 -5 189 195 0 0 chr2 13923195 13923236 -236764618 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 1162 190 37 48 chr2 13923237 13923505 -236764349 - L1MD2 LINE L1 -43 6316 6052 263 368 66 33 chr2 13924386 13924489 -236763365 - L2 LINE L2 0 3272 3161 2475 104 69 46 chr2 13924489 13924879 -236762975 + MLT2A1 LTR ERVL 1 403 -41 309 51 0 0 chr2 13924879 13924918 -236762936 + (TG)n Simple_repeat Simple_repeat 2 40 0 2475 104 69 46 chr2 13924918 13924961 -236762893 + MLT2A1 LTR ERVL 403 444 0 263 368 66 33 chr2 13924961 13925009 -236762845 - L2 LINE L2 -111 3161 3116 215 264 24 16 chr2 13925749 13925874 -236761980 + (TTA)n Simple_repeat Simple_repeat 3 128 0 232 271 83 31 chr2 13925964 13926060 -236761794 - MIR SINE MIR -66 142 42 186 143 0 0 chr2 13926393 13926428 -236761426 + (CA)n Simple_repeat Simple_repeat 2 36 0 326 359 51 18 chr2 13926538 13926697 -236761157 + MIR SINE MIR 25 194 -68 2355 69 10 0 chr2 13926697 13926987 -236760867 + AluSc SINE Alu 1 293 -16 326 359 51 18 chr2 13926987 13927044 -236760810 + MIR SINE MIR 194 248 -14 226 122 41 20 chr2 13927475 13927524 -236760330 + GA-rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr2 13927901 13927930 -236759924 + AT_rich Low_complexity Low_complexity 1 29 0 512 262 125 12 chr2 13928002 13928170 -236759684 - MER5A DNA MER1_type -2 187 1 2218 108 0 3 chr2 13928357 13928654 -236759200 + AluSc SINE Alu 1 296 -13 206 367 0 0 chr2 13929276 13929336 -236758518 + MIR SINE MIR 87 146 -62 24 32 0 0 chr2 13930397 13930428 -236757426 + AT_rich Low_complexity Low_complexity 1 31 0 275 281 34 0 chr2 13930715 13930804 -236757050 + MIR3 SINE MIR 111 202 -6 373 295 58 43 chr2 13931262 13931401 -236756453 - MIR3 SINE MIR -47 161 21 197 359 51 0 chr2 13932865 13932943 -236754911 + MIR3 SINE MIR 79 160 -48 262 360 36 0 chr2 13933147 13933258 -236754596 - L2 LINE L2 0 3272 3158 232 313 32 114 chr2 13933632 13933878 -236753976 - L2 LINE L2 -491 2823 2598 239 256 47 35 chr2 13934674 13934760 -236753094 + L3 LINE CR1 1348 1434 -143 2543 91 3 11 chr2 13934769 13935130 -236752724 - L1PA8 LINE L1 0 6172 5815 226 307 95 44 chr2 13935152 13935289 -236752565 + MIR SINE MIR 50 193 -69 345 304 156 49 chr2 13936770 13937218 -236750636 - L2 LINE L2 -632 2682 2187 1828 182 3 3 chr2 13937994 13938302 -236749552 - AluJb SINE Alu -4 308 1 191 328 35 26 chr2 13938533 13938649 -236749205 + MIR3 SINE MIR 63 179 -29 218 277 60 12 chr2 13939633 13939716 -236748138 + MIR SINE MIR 17 103 -105 1775 158 3 11 chr2 13941048 13941372 -236746482 + AluSx SINE Alu 1 322 0 186 375 80 9 chr2 13941901 13942013 -236745841 + L2 LINE L2 3116 3235 -37 246 128 0 0 chr2 13942205 13942244 -236745610 + (GGATG)n Simple_repeat Simple_repeat 1 39 0 344 296 0 0 chr2 13942315 13942403 -236745451 - MIR SINE MIR -23 239 152 4305 205 103 16 chr2 13942456 13943730 -236744124 - Charlie1a DNA MER1_type -48 1407 24 286 290 100 10 chr2 13943755 13943855 -236743999 - MIR SINE MIR -120 142 34 1243 292 112 72 chr2 13944389 13945536 -236742318 + L2 LINE L2 1571 2762 -552 441 306 169 31 chr2 13945587 13945943 -236741911 + L2 LINE L2 2888 3292 -21 1943 133 3 7 chr2 13946061 13946347 -236741507 + AluSx SINE Alu 1 285 -27 10133 184 12 7 chr2 13946565 13949895 -236737959 + L1PB1 LINE L1 2803 6149 -2 341 319 0 0 chr2 13949920 13950011 -236737843 - MIR SINE MIR -170 92 2 401 304 37 51 chr2 13950363 13950464 -236737390 - MIR SINE MIR -1 261 160 1935 168 123 8 chr2 13950464 13950846 -236737008 - MSTA LTR MaLR 0 428 3 401 304 37 51 chr2 13950846 13950958 -236736896 - MIR SINE MIR -102 160 51 211 373 48 24 chr2 13950980 13951106 -236736748 - L2 LINE L2 -257 3015 2887 2444 144 67 8 chr2 13951218 13951620 -236736234 + MSTA LTR MaLR 3 428 0 21 57 0 0 chr2 13952263 13952298 -236735556 + AT_rich Low_complexity Low_complexity 1 35 0 2181 134 0 6 chr2 13952358 13952671 -236735183 + AluSx SINE Alu 1 311 -1 181 362 0 0 chr2 13952673 13952731 -236735123 - MIR SINE MIR -162 100 43 533 290 70 11 chr2 13953842 13954028 -236733826 - MIR SINE MIR -15 247 51 723 209 55 0 chr2 13954228 13954391 -236733463 - L1PA16 LINE L1 -4 6162 5991 327 265 56 31 chr2 13954715 13954877 -236732977 + MLT1C LTR MaLR 302 467 0 270 81 0 0 chr2 13955266 13955303 -236732551 + (CA)n Simple_repeat Simple_repeat 2 38 0 2031 149 49 0 chr2 13955849 13956199 -236731655 + L1MC1 LINE L1 5459 5825 -508 2066 153 8 6 chr2 13956317 13956676 -236731178 + L1PA13 LINE L1 5788 6147 -16 25 0 0 0 chr2 13956680 13956705 -236731149 + AT_rich Low_complexity Low_complexity 1 25 0 557 191 71 0 chr2 13956760 13956886 -236730968 - MER45A DNA AcHobo 0 178 44 276 351 77 62 chr2 13956953 13957212 -236730642 + L2 LINE L2 3006 3268 -4 23 0 0 0 chr2 13957334 13957357 -236730497 + AT_rich Low_complexity Low_complexity 1 23 0 189 390 52 19 chr2 13958055 13958209 -236729645 - MER5A DNA MER1_type -7 182 24 7185 103 9 22 chr2 13958560 13959645 -236728209 - MER11C LTR ERVK 0 1071 1 313 273 80 0 chr2 13959851 13959939 -236727915 + L2 LINE L2 3219 3313 0 484 316 85 16 chr2 13959988 13960295 -236727559 - LTR16A LTR ERVL -8 442 115 3852 164 10 13 chr2 13960642 13961355 -236726499 - MER50 LTR ERV1 -23 711 1 201 143 0 0 chr2 13964947 13964982 -236722872 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 210 194 0 0 chr2 13965372 13965434 -236722420 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 591 157 86 60 chr2 13965573 13965756 -236722098 + MLT1B LTR MaLR 8 180 -194 1520 155 26 3 chr2 13966719 13967023 -236720831 - L1MA1 LINE L1 -58 6244 5934 1048 170 12 69 chr2 13967307 13967432 -236720422 + MER96B DNA MER1_type? 3 109 -308 2380 90 7 0 chr2 13967432 13967731 -236720123 + AluSq SINE Alu 1 301 -12 1048 170 12 69 chr2 13967731 13967852 -236720002 + MER96B DNA MER1_type? 109 235 -182 283 361 80 53 chr2 13970401 13970664 -236717190 - L2 LINE L2 -576 2738 2469 1361 209 46 19 chr2 13971014 13971469 -236716385 + MLT2A2 LTR ERVL 2 475 -40 388 89 33 22 chr2 13971469 13971559 -236716295 + (TA)n Simple_repeat Simple_repeat 2 92 0 331 111 0 0 chr2 13971559 13971613 -236716241 + MLT2A2 LTR ERVL 400 453 0 184 348 43 31 chr2 13971651 13971812 -236716042 + L2 LINE L2 2796 2958 -356 2770 256 23 56 chr2 13972100 13973388 -236714466 - L1M2 LINE L1 -2805 3577 2329 2541 223 57 16 chr2 13973404 13974126 -236713728 + L1M2 LINE L1 3571 4329 -2053 2149 85 17 0 chr2 13974126 13974419 -236713435 + AluY SINE Alu 1 298 -13 2541 223 57 16 chr2 13974419 13974489 -236713365 + L1M2 LINE L1 4329 4395 -1987 1301 169 66 42 chr2 13974617 13974961 -236712893 + Tigger7 DNA MER2_type 129 2431 -56 6474 194 127 29 chr2 13974961 13976560 -236711294 + MER52A LTR ERV1 1 1755 0 253 267 17 0 chr2 13976560 13976618 -236711236 + Tigger7 DNA MER2_type 2428 2486 -1 2373 192 27 10 chr2 13976621 13977426 -236710428 + L1M2 LINE L1 5203 6022 -526 353 344 23 0 chr2 13977988 13978116 -236709738 - L2 LINE L2 0 3313 3183 847 167 48 0 chr2 13979285 13979471 -236708383 + L1MA4A LINE L1 6098 6292 -11 198 407 11 0 chr2 13979588 13979679 -236708175 - MIR SINE MIR -77 131 40 13878 181 27 19 chr2 13979987 13982177 -236705677 + L1PA14 LINE L1 2049 4280 -1881 423 0 0 0 chr2 13982177 13982224 -236705630 + (TG)n Simple_repeat Simple_repeat 2 48 0 13878 181 27 19 chr2 13982224 13984122 -236703732 + L1PA14 LINE L1 4280 6161 0 360 64 0 0 chr2 13984163 13984210 -236703644 + (TG)n Simple_repeat Simple_repeat 2 48 0 262 281 110 12 chr2 13984283 13984365 -236703489 + MIR SINE MIR 30 119 -89 555 201 140 49 chr2 13985024 13985188 -236702666 + AluJb SINE Alu 134 312 0 277 195 11 23 chr2 13985196 13985283 -236702571 + GA-rich Low_complexity Low_complexity 5 90 0 1260 126 0 11 chr2 13987032 13987206 -236700648 - AluSg/x SINE Alu -9 303 132 507 247 135 28 chr2 13987214 13987392 -236700462 - ERVL LTR ERVL -691 5073 4877 2437 191 55 3 chr2 13987433 13987582 -236700272 + L1 LINE L1 4000 4140 -2006 216 0 0 0 chr2 13987582 13987606 -236700248 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 2437 191 55 3 chr2 13987606 13988033 -236699821 + L1 LINE L1 4140 4606 -1540 1071 239 71 13 chr2 13988057 13988430 -236699424 + L1 LINE L1 4950 5347 -799 180 0 0 0 chr2 13988430 13988450 -236699404 + (CTTG)n Simple_repeat Simple_repeat 2 21 0 1591 175 17 10 chr2 13988456 13988856 -236698998 - AluJo SINE Alu 0 407 6 2281 158 16 13 chr2 13988859 13989306 -236698548 + L1P5 LINE L1 5338 5785 -371 2050 85 17 30 chr2 13989306 13989601 -236698253 + AluY SINE Alu 1 291 -20 3631 26 2 0 chr2 13989606 13990058 -236697796 + L1P LINE L1 3424 3876 -2270 277 264 18 18 chr2 13990158 13990268 -236697586 - ERVL LTR ERVL -1676 4088 3979 406 299 62 42 chr2 13990540 13991637 -236696217 + L1ME LINE L1 4370 5494 -670 495 193 35 0 chr2 13992551 13992696 -236695158 + GA-rich Low_complexity Low_complexity 1 150 0 252 198 25 12 chr2 13994022 13994103 -236693751 + CT-rich Low_complexity Low_complexity 1 82 0 925 213 88 0 chr2 13994115 13994331 -236693523 - MLT1D LTR MaLR -270 235 1 2068 215 86 35 chr2 13994331 13995108 -236692746 + L1MDa LINE L1 1686 2502 -4038 2020 178 0 0 chr2 13995137 13995446 -236692408 + AluSx SINE Alu 1 309 -3 1650 191 0 51 chr2 13995575 13995890 -236691964 - AluJo SINE Alu -13 299 1 311 276 24 47 chr2 13996010 13996137 -236691717 - MIR SINE MIR -112 150 27 246 341 57 51 chr2 13997095 13997271 -236690583 + MIR3 SINE MIR 30 206 -2 309 333 24 16 chr2 13997574 13997697 -236690157 - MIR3 SINE MIR -83 125 2 203 327 82 9 chr2 13998680 13998790 -236689064 + MIR SINE MIR 33 150 -58 503 341 17 17 chr2 14000022 14000201 -236687653 + MIR SINE MIR 2 180 -82 295 289 248 8 chr2 14000224 14000345 -236687509 + L3 LINE CR1 1411 1560 -17 335 250 36 91 chr2 14000491 14000717 -236687137 + MIR SINE MIR 10 216 -46 1051 157 47 51 chr2 14002229 14002271 -236685583 + MER92B LTR ERV1 1 42 -594 2067 117 14 51 chr2 14002271 14002621 -236685233 + MER1B DNA MER1_type 1 337 0 1051 157 47 51 chr2 14002621 14002813 -236685041 + MER92B LTR ERV1 42 234 -402 461 178 47 0 chr2 14002819 14002926 -236684928 + MER92B LTR ERV1 525 636 0 190 321 124 37 chr2 14003586 14003804 -236684050 + MIR SINE MIR 20 256 -6 320 243 209 10 chr2 14004309 14004515 -236683339 + L1MC4 LINE L1 6459 6705 -1337 213 293 10 10 chr2 14004557 14004656 -236683198 + (TA)n Simple_repeat Simple_repeat 1 99 0 1850 260 54 11 chr2 14004657 14005300 -236682554 + L1MC4 LINE L1 6654 7324 -718 1549 217 42 17 chr2 14005310 14005715 -236682139 - LTR52 LTR ERVL -2 419 5 3409 258 32 21 chr2 14005720 14006709 -236681145 - LTR52-int LTR ERVL -1 3555 2328 1973 189 80 133 chr2 14006729 14007525 -236680329 - LTR28 LTR ERV1 0 1020 119 296 199 92 61 chr2 14007540 14007671 -236680183 - MER61B LTR ERV1 -290 135 1 880 221 0 44 chr2 14007671 14007897 -236679957 - LTR52-int LTR ERVL -1130 2426 2211 488 273 28 0 chr2 14007913 14008056 -236679798 + LTR52 LTR ERVL 259 405 -16 1478 233 68 68 chr2 14008069 14008777 -236679077 + L1MC4 LINE L1 7328 8035 -7 1479 247 100 18 chr2 14009019 14009794 -236678060 + L1ME3 LINE L1 5254 6118 -44 2195 115 3 0 chr2 14009897 14010193 -236677661 + AluSq SINE Alu 1 297 -16 7422 45 0 0 chr2 14011109 14012026 -236675828 + L1PA5 LINE L1 5235 6151 -3 328 294 89 44 chr2 14012032 14012212 -236675642 + L2 LINE L2 2619 2806 -508 4986 183 23 12 chr2 14013725 14015241 -236672613 + L1MA9 LINE L1 4784 6312 0 2503 139 10 17 chr2 14016108 14016524 -236671330 - MSTB LTR MaLR -10 405 5 1807 191 32 30 chr2 14016547 14017102 -236670752 + MLT2A2 LTR ERVL 3 554 0 5539 185 53 26 chr2 14017108 14018711 -236669143 - MLT1A1-int LTR MaLR -19 1632 6 202 329 12 12 chr2 14018797 14018882 -236668972 + MIR SINE MIR 53 137 -125 3697 208 32 11 chr2 14018917 14019901 -236667953 - Charlie1a DNA MER1_type 0 1455 372 1442 207 138 12 chr2 14019901 14020307 -236667547 + MER119 DNA MER1_type 1 457 -126 * 3797 149 42 8 chr2 14020284 14021022 -236666832 + Tigger3(Golem) DNA MER2_type 2266 3028 -1 1325 232 68 11 chr2 14021143 14021497 -236666357 - Charlie1a DNA MER1_type -1077 378 5 207 0 0 0 chr2 14021746 14021769 -236666085 + (T)n Simple_repeat Simple_repeat 1 23 0 1134 347 15 15 chr2 14022756 14023301 -236664553 - ERVL LTR ERVL -516 5248 4704 296 205 39 128 chr2 14023471 14023627 -236664227 - MLT1A1 LTR MaLR 0 396 255 577 200 63 117 chr2 14023686 14023891 -236663963 - MLT1A1 LTR MaLR -171 194 1 2625 245 113 78 chr2 14023891 14025145 -236662709 - MLT1A1-int LTR MaLR 0 1651 383 2161 126 3 3 chr2 14025145 14025447 -236662407 - AluSg SINE Alu -8 302 1 2625 245 113 78 chr2 14025447 14025842 -236662012 - MLT1A1-int LTR MaLR -1268 383 3 836 236 10 10 chr2 14025843 14026038 -236661816 - MLT1A1 LTR MaLR 0 365 171 893 182 25 45 chr2 14026053 14026251 -236661603 - MLT1A1 LTR MaLR -171 194 1 1438 188 177 24 chr2 14026356 14026787 -236661067 + MER66A LTR ERV1 97 474 -4 1372 235 92 40 chr2 14026795 14027319 -236660535 + MER66A-int LTR ERV1 1 551 -6125 7625 229 27 20 chr2 14027420 14030039 -236657815 + MER66A-int LTR ERV1 737 3120 -3211 436 236 0 18 chr2 14030017 14030127 -236657727 + MER66A-int LTR ERV1 3337 3444 -3232 * 394 273 9 0 chr2 14030065 14030175 -236657679 + LTR57-int LTR ERVL 1319 1429 -3914 * 1805 214 30 90 chr2 14030177 14030912 -236656942 + MER66A-int LTR ERV1 3744 4434 -2242 1482 228 0 0 chr2 14030927 14031234 -236656620 + AluJb SINE Alu 1 307 0 275 241 76 25 chr2 14031235 14031314 -236656540 + MER4B LTR ERV1 79 161 -449 386 225 58 58 chr2 14031315 14031453 -236656401 + MER66A-int LTR ERV1 5915 6052 -1704 2459 171 5 2 chr2 14031454 14031880 -236655974 + MER66A-int LTR ERV1 6250 6676 0 1473 196 72 56 chr2 14031917 14032369 -236655485 + MER66A LTR ERV1 97 478 0 669 333 44 43 chr2 14032997 14033355 -236654499 - HERVL LTR ERVL -1796 3702 3346 1157 240 66 6 chr2 14033355 14033672 -236654182 - MER58B DNA MER1_type -4 337 2 669 333 44 43 chr2 14033672 14034079 -236653775 - HERVL LTR ERVL -2152 3346 2939 282 266 48 8 chr2 14034199 14034323 -236653531 - L1ME3 LINE L1 -11 6151 6023 310 238 79 0 chr2 14034389 14034490 -236653364 - L1ME3 LINE L1 -272 5890 5782 2053 146 0 7 chr2 14034672 14034980 -236652874 + AluSq SINE Alu 1 306 -7 23 0 0 0 chr2 14035248 14035271 -236652583 + AT_rich Low_complexity Low_complexity 1 23 0 475 312 13 51 chr2 14135778 14135935 -236551919 + MIR3 SINE MIR 27 177 -31 1352 220 60 26 chr2 14136166 14136250 -236551604 + MLT1A1 LTR MaLR 1 81 -284 1603 67 0 14 chr2 14136250 14136459 -236551395 + AluY SINE Alu 105 310 -1 1352 220 60 26 chr2 14136459 14136724 -236551130 + MLT1A1 LTR MaLR 81 362 -3 549 263 130 8 chr2 14140033 14140196 -236547658 + MIR SINE MIR 3 182 -80 391 247 38 38 chr2 14141405 14141563 -236546291 + L1ME4a LINE L1 5725 5882 -239 263 318 130 21 chr2 14142221 14142413 -236545441 - MIR SINE MIR 0 262 50 948 190 63 0 chr2 14142700 14142874 -236544980 - L1PB4 LINE L1 0 6156 5972 222 239 128 9 chr2 14143055 14143164 -236544690 - MIR SINE MIR -15 247 126 624 303 83 37 chr2 14143237 14143804 -236544050 + L1ME4a LINE L1 5512 6104 -17 282 73 0 0 chr2 14144867 14144908 -236542946 + (TC)n Simple_repeat Simple_repeat 2 42 0 2086 229 29 44 chr2 14145036 14145561 -236542293 + MLT2B3 LTR ERVL 1 517 -37 407 188 0 35 chr2 14145563 14145648 -236542206 + MLT2A1 LTR ERVL 361 442 -2 226 261 54 0 chr2 14145919 14146011 -236541843 + GA-rich Low_complexity Low_complexity 3 99 0 853 192 0 0 chr2 14146469 14146599 -236541255 - FRAM SINE Alu -38 138 9 277 312 81 102 chr2 14147497 14147607 -236540247 + MIR3 SINE MIR 17 123 -85 1173 203 74 7 chr2 14147607 14147903 -236539951 + MER33 DNA MER1_type 5 320 -4 277 312 81 102 chr2 14147903 14147978 -236539876 + MIR3 SINE MIR 123 198 -10 250 312 9 46 chr2 14148920 14149029 -236538825 - MER20B DNA MER1_type -642 141 37 269 287 8 74 chr2 14149886 14150008 -236537846 - MIR3 SINE MIR -36 172 59 2940 112 44 34 chr2 14150347 14150852 -236537002 + MLT2A1 LTR ERVL 1 519 -1 1785 157 13 0 chr2 14151627 14151927 -236535927 - L1MB1 LINE L1 -122 6046 5743 622 149 70 0 chr2 14151927 14152031 -236535823 + L1MB1 LINE L1 6047 6168 0 267 229 16 0 chr2 14152051 14152112 -236535742 + MIR SINE MIR 198 259 -3 2197 120 3 0 chr2 14152141 14152441 -236535413 + AluSq SINE Alu 1 301 -12 841 209 18 0 chr2 14152965 14153128 -236534726 + FRAM SINE Alu 1 166 0 23 0 0 0 chr2 14153168 14153191 -236534663 + AT_rich Low_complexity Low_complexity 1 23 0 324 224 88 20 chr2 14153217 14153364 -236534490 + L1MDb LINE L1 1194 1350 -5059 426 223 47 47 chr2 14153403 14153551 -236534303 + L1M4 LINE L1 4203 4350 -1796 216 342 90 34 chr2 14153757 14153991 -236533863 + L2 LINE L2 2989 3235 -37 268 278 56 68 chr2 14154311 14154473 -236533381 + MIR SINE MIR 89 248 -14 2321 67 0 41 chr2 14154554 14154869 -236532985 + AluY SINE Alu 1 302 -9 1088 141 6 0 chr2 14154879 14155049 -236532805 + AluSg/x SINE Alu 142 312 0 456 227 45 9 chr2 14156971 14157081 -236530773 - MLT1I LTR MaLR 0 409 296 1404 213 59 0 chr2 14157625 14157898 -236529956 - AluSx SINE Alu -23 289 1 23 0 0 0 chr2 14158773 14158796 -236529058 + AT_rich Low_complexity Low_complexity 1 23 0 420 147 0 0 chr2 14159333 14159408 -236528446 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 253 293 54 27 chr2 14159681 14159828 -236528026 - L1ME3A LINE L1 -15 6155 6005 363 284 0 20 chr2 14160398 14160500 -236527354 - MIR3 SINE MIR -26 182 83 2114 136 3 0 chr2 14160969 14161278 -236526576 - AluSx SINE Alu -2 310 1 1514 166 147 3 chr2 14161658 14161971 -236525883 + MER46B DNA MER2_type 1 233 -3 399 344 22 28 chr2 14161984 14162164 -236525690 - MIR3 SINE MIR -15 193 15 215 167 24 0 chr2 14162292 14162334 -236525520 + MIR SINE MIR 108 150 -112 220 277 46 0 chr2 14162415 14162480 -236525374 + MIR SINE MIR 81 148 -114 420 313 8 15 chr2 14163780 14163914 -236523940 - MER5B DNA MER1_type -42 136 4 205 146 42 0 chr2 14164138 14164186 -236523668 + (TA)n Simple_repeat Simple_repeat 2 51 0 287 268 12 12 chr2 14165249 14165331 -236522523 - MLT1I LTR MaLR -6 403 322 267 224 95 82 chr2 14165500 14165647 -236522207 - MLT1J2 LTR MaLR -301 149 1 180 328 78 16 chr2 14165682 14165746 -236522108 - L2 LINE L2 -229 3084 3017 206 316 45 51 chr2 14166002 14166179 -236521675 + L2 LINE L2 2435 2610 -704 744 168 41 77 chr2 14166190 14166386 -236521468 + MLT1A2 LTR MaLR 13 201 -164 2212 141 29 6 chr2 14166396 14166743 -236521111 - THE1A LTR MaLR 0 355 1 2266 69 14 0 chr2 14166743 14167033 -236520821 - THE1A-int LTR MaLR 0 1580 1287 775 218 26 0 chr2 14167033 14167189 -236520665 + MLT1A2 LTR MaLR 215 374 0 280 321 115 48 chr2 14167368 14167698 -236520156 + L2 LINE L2 2916 3267 -5 1812 106 0 109 chr2 14167881 14168202 -236519652 + AluSc SINE Alu 3 288 -21 647 338 14 0 chr2 14168207 14168417 -236519437 - MIR SINE MIR -8 254 42 706 339 77 50 chr2 14169083 14169473 -236518381 - L2 LINE L2 0 3272 2894 2079 123 0 0 chr2 14169473 14169791 -236518063 + AluSx SINE Alu 1 318 0 706 339 77 50 chr2 14169791 14171058 -236516796 - L2 LINE L2 -378 2894 1496 191 327 67 19 chr2 14171217 14171321 -236516533 + MIR3 SINE MIR 4 112 -96 442 291 16 16 chr2 14171528 14171655 -236516199 - MER5A DNA MER1_type -23 166 40 1119 234 58 69 chr2 14172944 14173393 -236514461 - MLT1J2 LTR MaLR 0 450 7 603 272 113 25 chr2 14174057 14174296 -236513558 - MIR SINE MIR 0 262 3 223 303 0 30 chr2 14175365 14175431 -236512423 + MIR SINE MIR 82 145 -63 183 156 0 0 chr2 14176718 14176750 -236511104 + (CGGAG)n Simple_repeat Simple_repeat 1 32 0 212 158 0 0 chr2 14177226 14177264 -236510590 + (CA)n Simple_repeat Simple_repeat 2 39 0 189 107 0 0 chr2 14180138 14180166 -236507688 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 189 0 0 0 chr2 14181505 14181526 -236506328 + (A)n Simple_repeat Simple_repeat 1 21 0 237 224 0 0 chr2 14182245 14182303 -236505551 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 225 0 0 0 chr2 14182469 14182494 -236505360 + (CA)n Simple_repeat Simple_repeat 2 26 0 673 154 51 82 chr2 14184280 14184475 -236503379 + MER53 DNA DNA 1 189 0 195 357 116 21 chr2 14184974 14185243 -236502611 + L2 LINE L2 2760 3047 -225 226 384 26 20 chr2 14189244 14189395 -236498459 - MIR SINE MIR -79 183 32 1425 202 91 20 chr2 14190834 14191175 -236496679 + MLT1A1 LTR MaLR 1 365 0 1718 223 84 12 chr2 14191622 14192110 -236495744 - Charlie1b DNA MER1_type 0 523 1 1972 184 17 6 chr2 14193122 14193475 -236494379 + MLT1A1 LTR MaLR 2 358 -7 600 318 23 10 chr2 14193964 14194266 -236493588 - L1ME4a LINE L1 -218 5903 5598 736 299 36 21 chr2 14194771 14195158 -236492696 - L1ME LINE L1 -530 5574 5189 1816 117 4 0 chr2 14195381 14195657 -236492197 + AluY SINE Alu 34 310 0 473 265 89 63 chr2 14195877 14196233 -236491621 - L1ME LINE L1 -1094 4986 4606 620 305 5 5 chr2 14196243 14196443 -236491411 - L1ME LINE L1 -1979 4101 3902 1884 266 77 7 chr2 14196448 14197046 -236490808 + L1ME3A LINE L1 5446 6085 -85 27 29 0 0 chr2 14197046 14197080 -236490774 + AT_rich Low_complexity Low_complexity 1 34 0 346 341 14 7 chr2 14197200 14197338 -236490516 + MIR3 SINE MIR 59 197 -11 1435 219 42 28 chr2 14197567 14197927 -236489927 - MLT1A1 LTR MaLR 0 365 1 585 289 107 39 chr2 14198250 14198614 -236489240 + MLT1J LTR MaLR 123 511 0 796 278 92 48 chr2 14199296 14199667 -236488187 - L2 LINE L2 -7 3306 2920 218 256 0 0 chr2 14200188 14200227 -236487627 - L2 LINE L2 -33 3239 3201 279 294 179 32 chr2 14200374 14200592 -236487262 + MIR SINE MIR 13 262 0 345 238 12 0 chr2 14200759 14200843 -236487011 - HsTC2 DNA Tc2 -1808 90 6 733 258 129 7 chr2 14201232 14201980 -236485874 - L1ME LINE L1 -3242 2838 1923 920 304 86 54 chr2 14201990 14203574 -236484280 - L1ME LINE L1 -4376 1885 3 263 295 71 45 chr2 14203583 14203695 -236484159 + MER5B DNA MER1_type 41 155 -23 27 0 0 0 chr2 14204236 14204263 -236483591 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 14204449 14204483 -236483371 + AT_rich Low_complexity Low_complexity 1 34 0 327 25 0 0 chr2 14205245 14205285 -236482569 + (TG)n Simple_repeat Simple_repeat 2 41 0 2782 40 0 0 chr2 14205456 14205806 -236482048 - L1PA2 LINE L1 -838 5308 4959 7552 9 2 0 chr2 14205806 14206663 -236481191 + L1PA2 LINE L1 5295 6155 0 311 258 43 86 chr2 14207667 14207853 -236480001 - L1ME LINE L1 -532 5589 5412 27 62 0 0 chr2 14207892 14207940 -236479914 + AT_rich Low_complexity Low_complexity 1 48 0 252 122 0 0 chr2 14207940 14207981 -236479873 + (TA)n Simple_repeat Simple_repeat 2 42 0 958 155 7 7 chr2 14207982 14208137 -236479717 - AluSg/x SINE Alu -21 291 137 246 164 0 0 chr2 14208310 14208365 -236479489 + (TA)n Simple_repeat Simple_repeat 1 55 0 321 345 20 14 chr2 14208542 14208690 -236479164 - LTR67 LTR ERVL -1 556 408 1009 264 28 12 chr2 14208952 14209206 -236478648 - MIR SINE MIR -1 261 4 180 74 0 0 chr2 14209408 14209435 -236478419 + L2 LINE L2 3287 3313 0 560 259 52 60 chr2 14209491 14209723 -236478131 + LTR33 LTR ERVL 1 230 -291 456 235 0 26 chr2 14209832 14209947 -236477907 + LTR33 LTR ERVL 385 496 -25 31 0 0 0 chr2 14210106 14210137 -236477717 + AT_rich Low_complexity Low_complexity 1 31 0 566 292 84 100 chr2 14210157 14211050 -236476804 - L1ME LINE L1 -1605 4541 3660 407 284 140 54 chr2 14213109 14213574 -236474280 - MLT1H LTR MaLR -15 534 30 317 372 100 46 chr2 14213967 14214206 -236473648 + L2 LINE L2 3021 3272 0 309 265 25 86 chr2 14214377 14214539 -236473315 + MIR3 SINE MIR 51 202 -6 501 314 47 21 chr2 14216347 14216538 -236471316 + MIR3 SINE MIR 1 196 -12 516 263 137 21 chr2 14216585 14216775 -236471079 - MIR SINE MIR -23 239 28 273 299 95 8 chr2 14216868 14216998 -236470856 - MIR3 SINE MIR -44 164 21 320 287 77 21 chr2 14217355 14217498 -236470356 - MIR3 SINE MIR -9 199 49 2201 125 3 0 chr2 14217519 14217830 -236470024 - AluSx SINE Alu 0 312 1 278 221 79 142 chr2 14217903 14217955 -236469899 - MLT1I LTR MaLR -141 268 214 2222 181 37 22 chr2 14217955 14218413 -236469441 + MLT1C LTR MaLR 3 467 0 278 221 79 142 chr2 14218413 14218550 -236469304 - MLT1I LTR MaLR -195 214 91 21 0 0 0 chr2 14218922 14218943 -236468911 + AT_rich Low_complexity Low_complexity 1 21 0 600 162 18 9 chr2 14219303 14219414 -236468440 + MER81 DNA DNA 1 112 -2 371 252 37 0 chr2 14219515 14219622 -236468232 + MER81 DNA DNA 1 111 -3 569 216 40 8 chr2 14219636 14219761 -236468093 - MIR SINE MIR -63 145 17 229 387 0 9 chr2 14220227 14220338 -236467516 + MIR SINE MIR 33 142 -66 231 331 39 45 chr2 14220447 14220601 -236467253 + MIR SINE MIR 26 178 -84 195 42 0 0 chr2 14220808 14220832 -236467022 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 30 0 0 0 chr2 14220888 14220918 -236466936 + AT_rich Low_complexity Low_complexity 1 30 0 455 274 77 69 chr2 14220954 14221228 -236466626 - MLT1J LTR MaLR 0 511 236 265 254 30 0 chr2 14221552 14221619 -236466235 - MLT1L LTR MaLR -546 69 1 22 35 0 0 chr2 14221900 14221929 -236465925 + AT_rich Low_complexity Low_complexity 1 29 0 21 89 0 0 chr2 14222083 14222139 -236465715 + AT_rich Low_complexity Low_complexity 1 56 0 248 240 150 10 chr2 14223615 14223715 -236464139 - MIR SINE MIR -73 189 76 1466 66 0 0 chr2 14223767 14223981 -236463873 + L1PA8 LINE L1 5966 6179 0 1558 333 107 17 chr2 14224859 14225824 -236462030 + L2 LINE L2 417 1468 -1846 2192 162 38 23 chr2 14226013 14226052 -236461802 - MLT2A2 LTR ERVL 0 554 517 495 0 0 0 chr2 14226052 14226107 -236461747 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2192 162 38 23 chr2 14226107 14226602 -236461252 - MLT2A2 LTR ERVL -37 517 1 1937 327 85 75 chr2 14226603 14227852 -236460002 + L2 LINE L2 1527 2788 -526 1919 145 0 0 chr2 14228369 14228699 -236459155 + AluSx SINE Alu 1 330 0 242 318 16 0 chr2 14228838 14228901 -236458953 + L2 LINE L2 3123 3186 -86 2367 227 39 6 chr2 14229901 14230417 -236457437 - MER87 LTR ERV1 -6 535 3 381 22 0 0 chr2 14230488 14230534 -236457320 + (CA)n Simple_repeat Simple_repeat 2 47 0 461 328 4 43 chr2 14230775 14231007 -236456847 - L1MEc LINE L1 -5676 720 498 656 285 8 42 chr2 14231142 14231402 -236456452 - L1MEc LINE L1 -6090 306 56 213 361 12 0 chr2 14232047 14232130 -236455724 - MIR SINE MIR -74 134 51 348 340 52 36 chr2 14232616 14232810 -236455044 + L3 LINE CR1 1247 1443 -134 6144 29 4 1 chr2 14233006 14233739 -236454115 + L1PA4 LINE L1 5417 6151 -4 22 0 0 0 chr2 14233959 14233981 -236453873 + AT_rich Low_complexity Low_complexity 1 22 0 6855 69 159 28 chr2 14234741 14235860 -236451994 - MER11A LTR ERVK 0 1266 1 190 377 149 11 chr2 14237285 14237460 -236450394 + L2 LINE L2 2958 3156 -116 190 200 36 73 chr2 14237516 14237571 -236450283 - L2 LINE L2 -1 3271 3219 * 341 339 35 9 chr2 14237562 14237677 -236450177 + L2 LINE L2 3151 3268 -4 309 51 0 0 chr2 14238251 14238290 -236449564 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 14238420 14238455 -236449399 + AT_rich Low_complexity Low_complexity 1 35 0 303 44 0 0 chr2 14238948 14238993 -236448861 + L1PA3 LINE L1 6111 6155 0 1743 198 83 30 chr2 14239695 14240155 -236447699 - MLT1D LTR MaLR 0 505 22 530 298 192 0 chr2 14240223 14240431 -236447423 - MIR SINE MIR -2 260 13 309 26 0 0 chr2 14241315 14241353 -236446501 + (CA)n Simple_repeat Simple_repeat 2 39 0 230 239 194 0 chr2 14241523 14241590 -236446264 + MIR SINE MIR 36 115 -93 228 333 21 43 chr2 14241714 14241807 -236446047 + L2 LINE L2 3181 3271 -1 2179 169 48 0 chr2 14242443 14242821 -236445033 + MSTD LTR MaLR 1 396 0 497 263 50 53 chr2 14243173 14243435 -236444419 + MIR SINE MIR 2 262 0 22 0 0 0 chr2 14243569 14243591 -236444263 + AT_rich Low_complexity Low_complexity 1 22 0 198 350 150 0 chr2 14244221 14244301 -236443553 - L2 LINE L2 -47 3225 3134 936 209 121 85 chr2 14244390 14244777 -236443077 - MER57A LTR ERV1 0 403 3 348 286 157 31 chr2 14244853 14245108 -236442746 - L2 LINE L2 -337 2977 2691 402 325 32 0 chr2 14245443 14245597 -236442257 + MIR SINE MIR 101 259 -3 603 329 76 4 chr2 14245660 14245897 -236441957 - MIR SINE MIR -5 257 4 219 227 76 15 chr2 14245897 14245962 -236441892 + MIR SINE MIR 63 131 -77 286 296 56 24 chr2 14245962 14246087 -236441767 + MLT1J2 LTR MaLR 32 160 -290 989 284 30 62 chr2 14246266 14246868 -236440986 + HsTC2a DNA Tc2 1 583 -161 1017 304 61 39 chr2 14246868 14247512 -236440342 + L1ME LINE L1 5 662 -5408 192 288 17 17 chr2 14247553 14247612 -236440242 + MIR SINE MIR 76 134 -128 25 0 0 0 chr2 14247616 14247641 -236440213 + AT_rich Low_complexity Low_complexity 1 25 0 216 310 69 88 chr2 14248254 14248470 -236439384 + MIR SINE MIR 1 212 -50 204 125 0 0 chr2 14248885 14248917 -236438937 + (T)n Simple_repeat Simple_repeat 1 32 0 1490 213 89 9 chr2 14249533 14249961 -236437893 - MLT1C LTR MaLR 0 467 6 397 248 88 22 chr2 14250730 14250867 -236436987 - MIR SINE MIR 0 262 117 289 217 0 17 chr2 14251055 14251115 -236436739 + MIR SINE MIR 95 153 -109 336 347 60 40 chr2 14251672 14251822 -236436032 - MIR3 SINE MIR -11 197 45 823 198 89 10 chr2 14251858 14252060 -236435794 - MER20 DNA MER1_type 0 219 2 400 301 38 107 chr2 14252355 14252644 -236435210 + L2 LINE L2 2996 3264 -8 2018 161 46 10 chr2 14252685 14253228 -236434626 - L1M2 LINE L1 -743 5403 4971 3652 127 37 97 chr2 14253245 14253364 -236434490 + L1MA6 LINE L1 5536 5661 -639 2456 86 0 6 chr2 14253364 14253677 -236434177 + AluY SINE Alu 1 311 0 3652 127 37 97 chr2 14253677 14253893 -236433961 + L1MA6 LINE L1 5661 5888 -412 275 143 20 0 chr2 14253893 14253977 -236433877 - AluS SINE Alu 0 315 231 3652 127 37 97 chr2 14253977 14254405 -236433449 + L1MA6 LINE L1 5888 6300 0 1252 145 208 25 chr2 14254933 14255195 -236432659 + AluSx SINE Alu 1 306 0 187 311 202 25 chr2 14257327 14257446 -236430408 - MIR SINE MIR -102 160 21 219 386 90 7 chr2 14258214 14258359 -236429495 - L2 LINE L2 -333 2980 2824 1061 221 28 0 chr2 14259216 14259433 -236428421 - MER58A DNA MER1_type 0 224 2 375 295 48 42 chr2 14260030 14260196 -236427658 + MIR SINE MIR 68 234 -28 225 298 116 25 chr2 14260630 14260751 -236427103 + MIR3 SINE MIR 38 169 -39 522 284 96 23 chr2 14261067 14261285 -236426569 + MIR SINE MIR 25 258 -4 199 314 29 29 chr2 14261777 14261847 -236426007 - L2 LINE L2 -3 3269 3200 1870 124 56 25 chr2 14262040 14262395 -236425459 + THE1C LTR MaLR 10 375 0 286 377 27 0 chr2 14263234 14263380 -236424474 + L3 LINE CR1 1236 1385 -192 213 154 0 0 chr2 14263687 14263726 -236424128 + CT-rich Low_complexity Low_complexity 2 40 0 339 113 0 0 chr2 14263726 14263779 -236424075 + (CA)n Simple_repeat Simple_repeat 1 53 0 2055 131 0 13 chr2 14263942 14264247 -236423607 + AluSx SINE Alu 1 301 -11 510 197 15 36 chr2 14264686 14264823 -236423031 + LTR45 LTR ERV1 391 524 -1 257 291 241 25 chr2 14264943 14265146 -236422708 - MIR SINE MIR -14 248 2 24 32 0 0 chr2 14265626 14265657 -236422197 + AT_rich Low_complexity Low_complexity 1 31 0 213 355 120 22 chr2 14265927 14266110 -236421744 + MIR SINE MIR 49 249 -13 723 260 57 16 chr2 14266228 14266420 -236421434 - MIR SINE MIR -44 218 19 942 222 23 36 chr2 14266447 14266668 -236421186 + MER20 DNA MER1_type 1 218 -1 312 342 46 46 chr2 14267163 14267315 -236420539 - MIR3 SINE MIR -49 159 8 494 266 72 22 chr2 14268618 14268757 -236419097 - MIR3 SINE MIR -49 159 14 371 60 0 0 chr2 14269076 14269126 -236418728 - L1PA6 LINE L1 -7 6147 6098 1803 197 36 23 chr2 14269732 14270123 -236417731 - MSTD LTR MaLR 0 396 1 338 331 35 55 chr2 14270204 14270349 -236417505 + MIR SINE MIR 15 156 -52 1840 174 83 25 chr2 14271446 14271854 -236416000 + MSTB1 LTR MaLR 1 432 0 244 250 48 77 chr2 14272218 14272322 -236415532 - L2 LINE L2 0 3313 3213 282 347 8 0 chr2 14272926 14273047 -236414807 + LTR16B LTR ERVL 4 125 -339 388 171 184 32 chr2 14273084 14273242 -236414612 + MER96B DNA MER1_type? 49 230 -187 640 296 81 3 chr2 14273247 14273544 -236414310 + LTR16B LTR ERVL 145 464 0 213 39 0 0 chr2 14273770 14273796 -236414058 + (TATG)n Simple_repeat Simple_repeat 2 27 0 490 315 91 14 chr2 14276954 14277173 -236410681 - MIR SINE MIR -7 255 20 2014 170 29 10 chr2 14277294 14277677 -236410177 - MLT1B LTR MaLR 0 390 1 305 205 28 159 chr2 14278352 14278635 -236409219 + MLT1J LTR MaLR 128 373 -138 2040 116 41 0 chr2 14278899 14279193 -236408661 + AluSc SINE Alu 1 306 -3 451 274 6 45 chr2 14279465 14279622 -236408232 - L2 LINE L2 -1 3312 3162 210 261 0 0 chr2 14279625 14279671 -236408183 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 201 239 128 83 chr2 14279728 14279837 -236408017 + MIR3 SINE MIR 92 205 -3 183 352 14 14 chr2 14280086 14280157 -236407697 + L2 LINE L2 3223 3293 -20 279 0 0 0 chr2 14280167 14280198 -236407656 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1272 241 65 6 chr2 14282133 14282485 -236405369 + MLT1C LTR MaLR 95 467 0 440 281 50 7 chr2 14283571 14283710 -236404144 + MIR SINE MIR 116 260 -2 197 176 0 20 chr2 14283728 14283779 -236404075 + GA-rich Low_complexity Low_complexity 1 50 0 2117 204 30 42 chr2 14284052 14284558 -236403296 + MLT1D LTR MaLR 3 502 -3 608 270 131 18 chr2 14285913 14286135 -236401719 + MIR SINE MIR 4 250 -12 279 285 114 32 chr2 14286137 14286260 -236401594 + MIR SINE MIR 34 140 -68 222 276 145 0 chr2 14287493 14287569 -236400285 - L2 LINE L2 -38 3234 3148 231 342 25 8 chr2 14287716 14287836 -236400018 - MLT1L LTR MaLR -2 613 492 477 0 0 0 chr2 14288070 14288123 -236399731 + (TGGA)n Simple_repeat Simple_repeat 4 56 0 246 284 168 0 chr2 14289041 14289136 -236398718 - MIR3 SINE MIR -12 196 86 391 293 5 7 chr2 14289619 14290308 -236397546 + (CA)n Simple_repeat Simple_repeat 1 687 0 540 322 0 0 chr2 14290359 14290874 -236396980 + (CA)n Simple_repeat Simple_repeat 1 515 0 530 282 0 6 chr2 14290899 14291080 -236396774 + (CA)n Simple_repeat Simple_repeat 1 180 0 435 247 121 24 chr2 14291551 14291717 -236396137 - MIR SINE MIR -13 249 68 1134 8 0 0 chr2 14291774 14291895 -236395959 - L1PA3 LINE L1 0 6155 6035 4451 16 0 0 chr2 14291895 14292390 -236395464 + L1PA3 LINE L1 5474 5968 -187 233 281 0 18 chr2 14292407 14292464 -236395390 - L2 LINE L2 -230 3042 2987 220 338 14 29 chr2 14292905 14293044 -236394810 + L2 LINE L2 2599 2735 -579 369 310 44 9 chr2 14294095 14294208 -236393646 - L2 LINE L2 -17 3296 3180 203 225 225 50 chr2 14294608 14294647 -236393207 - MIR SINE MIR -109 153 122 261 0 0 0 chr2 14294647 14294676 -236393178 + (GA)n Simple_repeat Simple_repeat 2 30 0 203 225 225 50 chr2 14294676 14294716 -236393138 - MIR SINE MIR -140 122 60 184 303 78 49 chr2 14294995 14295137 -236392717 + MIR SINE MIR 111 256 -6 214 290 43 14 chr2 14295161 14295230 -236392624 - MIR SINE MIR -68 140 70 311 299 0 0 chr2 14295620 14295687 -236392167 - L2 LINE L2 -16 3256 3190 180 384 60 20 chr2 14295690 14295841 -236392013 + L2 LINE L2 3092 3248 -24 439 280 60 33 chr2 14296100 14296282 -236391572 - MIR SINE MIR -29 233 47 654 243 161 23 chr2 14296486 14296704 -236391150 + MIR SINE MIR 4 251 -11 437 308 48 7 chr2 14296713 14296859 -236390995 - MIR SINE MIR -26 236 85 983 235 145 0 chr2 14297577 14297866 -236389988 - L1ME1 LINE L1 -1 6165 5835 208 300 138 23 chr2 14297868 14297998 -236389856 - MER5B DNA MER1_type 0 178 34 6522 158 38 0 chr2 14297998 14299250 -236388604 + L1MC1 LINE L1 5043 6331 -2 503 289 56 6 chr2 14299302 14299503 -236388351 - MIR SINE MIR -46 216 8 1426 134 0 18 chr2 14300090 14300313 -236387541 - L1PB1 LINE L1 -191 5960 5742 1689 205 51 56 chr2 14300779 14301247 -236386607 - MLT1C LTR MaLR 0 467 2 363 291 27 9 chr2 14302133 14302243 -236385611 + L2 LINE L2 2677 2788 -526 438 200 50 0 chr2 14302464 14302544 -236385310 + MER96 DNA MER1_type? 1 84 -91 296 220 0 0 chr2 14302539 14302598 -236385256 - MER96 DNA MER1_type? -114 61 3 * 247 327 27 18 chr2 14302878 14302988 -236384866 - L2 LINE L2 -227 3045 2935 504 123 37 18 chr2 14303946 14304109 -236383745 + (TA)n Simple_repeat Simple_repeat 1 166 0 24 53 0 0 chr2 14304117 14304155 -236383699 + AT_rich Low_complexity Low_complexity 1 38 0 296 157 52 179 chr2 14304215 14304349 -236383505 - MER112 DNA MER1_type -7 253 137 288 0 0 0 chr2 14304379 14304411 -236383443 + (TG)n Simple_repeat Simple_repeat 1 32 0 348 317 84 18 chr2 14304519 14304686 -236383168 + MIR SINE MIR 20 197 -65 526 264 67 11 chr2 14304688 14304866 -236382988 + MIR SINE MIR 9 196 -66 214 233 128 83 chr2 14305566 14305699 -236382155 - MER5A DNA MER1_type -6 183 45 192 230 44 115 chr2 14305743 14305856 -236381998 + MIR SINE MIR 95 199 -63 441 216 193 0 chr2 14306945 14307097 -236380757 - MER5A DNA MER1_type 0 189 4 448 253 53 47 chr2 14307118 14307288 -236380566 + MER5B DNA MER1_type 1 171 -7 335 267 139 18 chr2 14307835 14308000 -236379854 + MIR3 SINE MIR 3 187 -21 471 245 41 24 chr2 14308151 14308354 -236379500 + MLT1J LTR MaLR 11 282 -331 2179 124 0 0 chr2 14308702 14309008 -236378846 + AluSx SINE Alu 1 306 -6 259 286 190 47 chr2 14310848 14311190 -236376664 + L2 LINE L2 2586 2976 -338 273 288 122 22 chr2 14311313 14311452 -236376402 + MIR SINE MIR 47 199 -63 1208 111 28 17 chr2 14311596 14311776 -236376078 - L1PA16 LINE L1 -5 6161 5980 250 378 25 34 chr2 14312323 14312442 -236375412 + L2 LINE L2 3150 3267 -5 180 374 55 22 chr2 14312548 14312639 -236375215 - MIR SINE MIR -133 129 36 265 330 9 0 chr2 14315393 14315508 -236372346 + (CATATA)n Simple_repeat Simple_repeat 2 117 0 27 0 0 0 chr2 14317137 14317164 -236370690 + AT_rich Low_complexity Low_complexity 1 27 0 199 313 67 15 chr2 14317214 14317348 -236370506 - L2 LINE L2 -1277 2037 1897 511 295 92 33 chr2 14317471 14317742 -236370112 - MLT1I LTR MaLR 0 409 123 181 356 114 23 chr2 14317811 14317943 -236369911 + L2 LINE L2 3117 3260 -12 209 294 174 22 chr2 14318244 14318336 -236369518 - MIR3 SINE MIR -8 200 95 21 0 0 0 chr2 14318568 14318589 -236369265 + AT_rich Low_complexity Low_complexity 1 21 0 395 290 26 52 chr2 14318911 14319066 -236368788 - MIR3 SINE MIR -49 159 9 248 296 82 0 chr2 14319640 14319738 -236368116 + MIR SINE MIR 47 152 -110 23 0 0 0 chr2 14320508 14320531 -236367323 + AT_rich Low_complexity Low_complexity 1 23 0 2181 112 0 0 chr2 14320531 14320816 -236367038 - AluSx SINE Alu -27 285 1 22 35 0 0 chr2 14321090 14321119 -236366735 + AT_rich Low_complexity Low_complexity 1 29 0 218 179 36 54 chr2 14321193 14321249 -236366605 - MIR3 SINE MIR -48 160 106 605 264 75 38 chr2 14321323 14321535 -236366319 - MIR SINE MIR -14 248 29 890 279 154 13 chr2 14322680 14323317 -236364537 + L2 LINE L2 2574 3313 0 234 278 100 0 chr2 14323550 14323640 -236364214 + MIR SINE MIR 76 174 -88 207 271 0 17 chr2 14324359 14324418 -236363436 + GA-rich Low_complexity Low_complexity 3 60 0 6011 108 2 1 chr2 14325717 14326569 -236361285 + L1PA13 LINE L1 5310 6162 -1 3347 31 5 8 chr2 14326767 14327154 -236360700 - L1PA3 LINE L1 -5 6150 5765 36922 38 2 2 chr2 14327254 14333193 -236354661 - L1PA3 LINE L1 -218 5937 9 294 326 152 30 chr2 14333472 14333604 -236354250 + L2 LINE L2 3125 3272 0 399 272 253 20 chr2 14333708 14333910 -236353944 - MIR SINE MIR -11 251 3 401 277 35 21 chr2 14333911 14334052 -236353802 + MIR3 SINE MIR 61 203 -5 2089 106 0 88 chr2 14334365 14334559 -236353295 - AluSp SINE Alu -11 302 147 2375 100 3 0 chr2 14334559 14334870 -236352984 - AluSp SINE Alu -1 312 1 2089 106 0 88 chr2 14334870 14335006 -236352848 - AluSp SINE Alu -166 147 1 1977 131 0 7 chr2 14335237 14335560 -236352294 + AluSg SINE Alu 1 321 0 376 230 0 0 chr2 14335609 14335683 -236352171 + L1MDb LINE L1 481 554 -5855 761 206 5 42 chr2 14335733 14335922 -236351932 + L1MDb LINE L1 653 834 -5575 1731 229 32 8 chr2 14335928 14336330 -236351524 - MER47B DNA MER2_type 0 418 7 1020 148 0 51 chr2 14336369 14336585 -236351269 + L1MDb LINE L1 871 1075 -5334 1067 188 54 122 chr2 14336585 14337003 -236350851 + MLT1B LTR MaLR 1 457 0 1892 234 95 33 chr2 14337003 14337831 -236350023 + L1MDb LINE L1 1048 1927 -4479 310 164 327 9 chr2 14337908 14338018 -236349836 + MER4C LTR ERV1 302 446 -19 22 0 0 0 chr2 14339516 14339538 -236348316 + AT_rich Low_complexity Low_complexity 1 22 0 311 282 145 0 chr2 14340637 14340754 -236347100 + MIR SINE MIR 64 197 -65 1586 287 66 43 chr2 14340991 14341851 -236346003 + L1MC4 LINE L1 7160 8039 -3 235 293 0 0 chr2 14341855 14341913 -236345941 - MIR3 SINE MIR -27 181 124 8276 35 3 0 chr2 14342190 14343247 -236344607 - L1P LINE L1 -3504 2642 1583 24 32 0 0 chr2 14343646 14343677 -236344177 + AT_rich Low_complexity Low_complexity 1 31 0 2962 221 66 48 chr2 14343681 14344731 -236343123 - L1ME1 LINE L1 -5 6230 5128 685 198 8 143 chr2 14344731 14344983 -236342871 - MER20 DNA MER1_type -1 218 1 2962 221 66 48 chr2 14344983 14345672 -236342182 - L1ME1 LINE L1 -1107 5128 4453 914 238 135 76 chr2 14345672 14345950 -236341904 + LTR28 LTR ERV1 1 261 -1494 1616 58 4 86 chr2 14345950 14346207 -236341647 + AluY SINE Alu 73 308 -3 914 238 135 76 chr2 14346207 14346948 -236340906 + LTR28 LTR ERV1 261 1742 -13 4557 265 52 25 chr2 14346964 14349266 -236338588 - L1ME1 LINE L1 -1767 4448 2091 1846 121 91 26 chr2 14349266 14349605 -236338249 + THE1B LTR MaLR 2 362 -2 4557 265 52 25 chr2 14349605 14350144 -236337710 - L1ME1 LINE L1 -4124 2091 1568 219 88 0 0 chr2 14350297 14350331 -236337523 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 1057 227 122 29 chr2 14350334 14350890 -236336964 - L1ME1 LINE L1 -5096 1300 693 * 5896 25 0 1 chr2 14350885 14351629 -236336225 - L1P LINE L1 -770 5376 4634 4471 14 4 0 chr2 14351629 14352137 -236335717 + L1PA2 LINE L1 5642 6155 0 1698 266 65 21 chr2 14352149 14352710 -236335144 - L1ME1 LINE L1 -5693 703 110 2207 117 0 7 chr2 14352710 14353034 -236334820 - AluSx SINE Alu 0 312 1 1698 266 65 21 chr2 14353034 14353099 -236334755 - L1ME1 LINE L1 -6286 110 49 2824 220 27 10 chr2 14353132 14353758 -236334096 - MER82 DNA MER2_type -15 638 2 300 310 54 16 chr2 14354092 14354221 -236333633 - L2 LINE L2 -1 3271 3138 328 304 30 129 chr2 14354381 14354746 -236333108 - L2 LINE L2 -411 2903 2575 214 354 97 65 chr2 14354775 14355083 -236332771 + L2 LINE L2 2869 3186 -86 999 140 43 38 chr2 14355132 14355318 -236332536 - MER5A DNA MER1_type 0 189 3 207 255 0 0 chr2 14355400 14355447 -236332407 + (TG)n Simple_repeat Simple_repeat 2 48 0 381 22 0 0 chr2 14356525 14356571 -236331283 + (TG)n Simple_repeat Simple_repeat 2 47 0 198 338 189 25 chr2 14356778 14356979 -236330875 + MIR SINE MIR 9 242 -20 180 77 0 0 chr2 14356987 14357013 -236330841 + (TC)n Simple_repeat Simple_repeat 1 26 0 342 227 91 65 chr2 14357216 14357370 -236330484 - MIR SINE MIR -71 191 34 2077 111 88 20 chr2 14357426 14357767 -236330087 + THE1B LTR MaLR 1 364 0 9452 112 14 10 chr2 14357767 14359244 -236328610 + THE1B-int LTR MaLR 1 1483 -97 407 110 0 24 chr2 14359344 14359426 -236328428 + THE1B-int LTR MaLR 1499 1578 -2 2216 106 66 23 chr2 14359428 14359777 -236328077 + THE1B LTR MaLR 1 364 0 392 285 124 27 chr2 14359781 14359967 -236327887 + MIR SINE MIR 46 249 -13 1832 177 0 7 chr2 14360300 14360599 -236327255 + AluJo SINE Alu 1 297 -15 743 253 109 30 chr2 14360625 14360827 -236327027 + MER20 DNA MER1_type 1 218 -1 190 333 8 34 chr2 14360852 14360969 -236326885 - L2 LINE L2 -649 2665 2552 377 310 58 35 chr2 14361269 14361440 -236326414 - MLT1G1 LTR MaLR -206 389 215 2097 127 116 10 chr2 14361963 14362350 -236325504 + MSTA LTR MaLR 1 428 0 8109 151 26 52 chr2 14362352 14363967 -236323887 + MSTA-int LTR MaLR 3 1575 -5 1942 176 99 8 chr2 14363969 14364361 -236323493 + MSTA LTR MaLR 1 428 0 587 323 126 39 chr2 14364723 14365333 -236322521 + L2 LINE L2 2137 2799 -515 2205 147 12 0 chr2 14365333 14365666 -236322188 + MER1B DNA MER1_type 1 337 0 248 376 50 21 chr2 14366590 14366731 -236321123 + L2 LINE L2 3123 3267 -5 351 378 11 32 chr2 14366976 14367164 -236320690 + MIR3 SINE MIR 18 201 -7 389 322 72 5 chr2 14367539 14367724 -236320130 - MIR SINE MIR -56 206 6 757 282 30 71 chr2 14368042 14368407 -236319447 + L2 LINE L2 2918 3267 -5 5968 102 4 5 chr2 14368839 14369847 -236318007 + L1MA1 LINE L1 5146 6152 -150 2371 65 16 0 chr2 14370091 14370397 -236317457 - AluY SINE Alu 0 311 1 2060 110 0 69 chr2 14370903 14371222 -236316632 + AluSg SINE Alu 1 297 -13 205 235 47 82 chr2 14371730 14371815 -236316039 - MIR3 SINE MIR -43 165 84 226 324 42 0 chr2 14372142 14372213 -236315641 - MIR SINE MIR -188 74 1 354 324 14 40 chr2 14372579 14372727 -236315127 - MIR3 SINE MIR -23 185 42 288 328 41 33 chr2 14373286 14373408 -236314446 - MIR SINE MIR -116 146 24 433 262 200 0 chr2 14373697 14373842 -236314012 + MER5A DNA MER1_type 6 179 -10 285 371 56 64 chr2 14374743 14375120 -236312734 - L2 LINE L2 0 3272 2899 382 156 2 39 chr2 14375204 14375299 -236312555 + MLT1F1 LTR MaLR 465 567 0 * 449 185 44 67 chr2 14375299 14375433 -236312421 + MER69 DNA AcHobo 15 145 -2381 410 160 11 0 chr2 14375432 14375526 -236312328 + MER69 DNA AcHobo 2336 2430 -96 * 439 169 0 0 chr2 14376627 14376704 -236311150 - L1MB1 LINE L1 -609 5725 5649 2181 166 48 0 chr2 14376708 14377124 -236310730 + L1MB1 LINE L1 5733 6168 0 864 310 71 33 chr2 14377227 14378025 -236309829 - L2 LINE L2 0 3313 2438 254 333 13 0 chr2 14379020 14379098 -236308756 + MER5B DNA MER1_type 3 81 -97 420 272 116 87 chr2 14379104 14379656 -236308198 - MLT1L LTR MaLR -7 608 41 216 254 52 155 chr2 14379867 14379998 -236307856 - MER91A DNA MER1_type -22 174 68 798 233 111 0 chr2 14379998 14380187 -236307667 + MER63A DNA MER1_type 1 210 0 216 254 52 155 chr2 14380187 14380248 -236307606 - MER91A DNA MER1_type -128 68 2 21 0 0 0 chr2 14380522 14380543 -236307311 + AT_rich Low_complexity Low_complexity 1 21 0 495 400 4 16 chr2 14380809 14381064 -236306790 + MIR SINE MIR 3 254 -8 259 182 26 26 chr2 14381436 14381513 -236306341 + (TTTG)n Simple_repeat Simple_repeat 2 78 0 463 197 76 4 chr2 14381923 14382085 -236305769 - MER20 DNA MER1_type -1 218 1 289 314 76 0 chr2 14382091 14382196 -236305658 - MIR SINE MIR -84 178 66 306 229 144 78 chr2 14382551 14382704 -236305150 + MIR SINE MIR 87 249 -13 474 298 62 31 chr2 14382860 14383021 -236304833 + MIR3 SINE MIR 19 184 -24 13023 23 9 1 chr2 14384356 14385987 -236301867 + L1PA2 LINE L1 3402 5044 -1102 4197 13 0 0 chr2 14386087 14386561 -236301293 + L1PA2 LINE L1 5675 6148 -7 913 188 35 23 chr2 14386571 14386832 -236301022 + L1M1 LINE L1 2897 3160 -2986 * 11259 179 32 60 chr2 14386829 14388552 -236299302 + L1MA3 LINE L1 10 1638 -5927 222 37 0 0 chr2 14388552 14388579 -236299275 + (GA)n Simple_repeat Simple_repeat 2 28 0 11259 179 32 60 chr2 14388579 14389456 -236298398 + L1MA3 LINE L1 1638 2538 -5027 6297 143 22 12 chr2 14389446 14391580 -236296274 + L1MA3 LINE L1 5575 7724 0 * 5235 158 34 23 chr2 14391564 14392832 -236295022 + L1M1 LINE L1 4250 5540 -743 * 736 217 12 37 chr2 14392940 14393100 -236294754 + MIR SINE MIR 42 198 -64 1966 185 6 0 chr2 14393100 14393446 -236294408 - MER7A DNA MER2_type 0 346 1 736 217 12 37 chr2 14393446 14393484 -236294370 + MIR SINE MIR 198 235 -27 228 67 0 0 chr2 14393899 14393929 -236293925 + (A)n Simple_repeat Simple_repeat 1 30 0 255 160 40 0 chr2 14394320 14394370 -236293484 - L2 LINE L2 0 3313 3262 395 383 32 34 chr2 14394573 14394983 -236292871 - L2 LINE L2 -353 2961 2553 2299 198 42 14 chr2 14395027 14395105 -236292749 - LTR53 LTR ERVL 0 519 445 2089 108 68 34 chr2 14395105 14395457 -236292397 - THE1B LTR MaLR 0 364 1 2299 198 42 14 chr2 14395457 14395877 -236291977 - LTR53 LTR ERVL -74 445 7 295 162 15 29 chr2 14396171 14396239 -236291615 + MLT1H LTR MaLR 483 549 0 3114 184 4 25 chr2 14396460 14397145 -236290709 + L1MA4 LINE L1 5629 6299 -1 2002 113 73 0 chr2 14398286 14398560 -236289294 - AluSg SINE Alu -16 294 1 455 303 45 86 chr2 14398607 14398851 -236289003 + MIR SINE MIR 23 256 -6 515 269 42 12 chr2 14398866 14399033 -236288821 - MLT1J2 LTR MaLR -2 448 277 1303 196 53 94 chr2 14399364 14399833 -236288021 - LTR7 LTR ERV1 0 450 1 282 299 38 87 chr2 14399888 14400072 -236287782 - MIR3 SINE MIR -12 196 22 2330 109 0 13 chr2 14400180 14400493 -236287361 + AluSg SINE Alu 1 309 -1 309 275 50 55 chr2 14400605 14400787 -236287067 + MIR SINE MIR 53 233 -29 872 278 25 16 chr2 14400801 14401046 -236286808 + MIR SINE MIR 16 262 0 272 256 0 45 chr2 14401252 14401334 -236286520 + MIR SINE MIR 73 150 -58 220 270 157 82 chr2 14401921 14401953 -236285901 - MIR SINE MIR -72 190 162 186 43 0 0 chr2 14401953 14401976 -236285878 + (TTA)n Simple_repeat Simple_repeat 2 24 0 220 270 157 82 chr2 14401976 14402102 -236285752 - MIR SINE MIR -100 162 20 205 382 44 22 chr2 14402663 14402799 -236285055 - MIR3 SINE MIR -63 145 7 390 346 47 16 chr2 14404184 14404385 -236283469 - MIR SINE MIR -14 248 4 484 312 40 24 chr2 14405395 14405642 -236282212 + LTR16C LTR ERVL 146 396 -95 2139 271 42 54 chr2 14406093 14407381 -236280473 + L1MEc LINE L1 18 1289 -5107 464 298 24 0 chr2 14407495 14407700 -236280154 + L1MEc LINE L1 1623 1832 -4564 1076 228 118 56 chr2 14407719 14408565 -236279289 + L1MEc LINE L1 1869 2761 -3454 323 97 0 9 chr2 14408577 14408643 -236279211 - AluSg/x SINE Alu -77 225 176 713 143 29 58 chr2 14408643 14408809 -236279045 - LTR12 LTR ERV1 -108 606 379 3835 121 56 44 chr2 14408810 14409486 -236278368 - LTR12 LTR ERV1 -4 684 1 277 171 0 0 chr2 14409488 14409529 -236278325 - AluSg/x SINE Alu -128 172 132 752 170 0 15 chr2 14409529 14409664 -236278190 - AluJo/FLAM SINE Alu -169 133 1 1445 238 165 66 chr2 14409664 14410492 -236277362 + L1MEc LINE L1 2745 3489 -2726 2359 69 0 50 chr2 14410492 14410810 -236277044 + AluY SINE Alu 1 302 -9 1445 238 165 66 chr2 14410810 14411468 -236276386 + L1MEc LINE L1 3489 4379 -1836 2103 113 10 3 chr2 14411487 14411779 -236276075 + AluSg SINE Alu 1 294 -16 24 0 0 0 chr2 14411809 14411833 -236276021 + AT_rich Low_complexity Low_complexity 1 24 0 1515 279 64 61 chr2 14411884 14412708 -236275146 - HERV16 LTR ERVL -2318 2678 1852 2377 325 98 14 chr2 14412925 14414330 -236273524 - HERV16 LTR ERVL -3471 1525 2 707 331 43 12 chr2 14414330 14414729 -236273125 - LTR16A LTR ERVL -18 432 22 452 128 73 64 chr2 14414770 14414879 -236272975 - L1MC1 LINE L1 0 6333 6224 3140 151 13 4 chr2 14414987 14415542 -236272312 - L1MC1 LINE L1 -100 6233 5674 334 296 105 71 chr2 14416884 14417316 -236270538 + HAL1b LINE L1 49 506 -842 2141 180 6 53 chr2 14417316 14417788 -236270066 + L1PA16 LINE L1 5716 6165 -1 334 296 105 71 chr2 14417788 14417906 -236269948 + HAL1b LINE L1 506 618 -730 944 205 83 5 chr2 14417907 14418112 -236269742 + MER58A DNA MER1_type 3 223 -1 203 304 0 0 chr2 14419828 14419874 -236267980 + MIR SINE MIR 31 76 -132 1479 170 38 42 chr2 14419962 14420264 -236267590 + AluJb SINE Alu 19 319 0 2036 297 123 27 chr2 14420834 14422306 -236265548 - L2 LINE L2 0 3313 1716 213 342 145 38 chr2 14422443 14422835 -236265019 + L2 LINE L2 2804 3237 -35 2205 112 14 0 chr2 14423377 14423671 -236264183 + AluSx SINE Alu 1 298 -14 2183 116 0 0 chr2 14424460 14424768 -236263086 - AluSx SINE Alu 0 308 1 422 214 22 0 chr2 14424972 14425061 -236262793 - ORSL DNA AcHobo -184 91 1 186 357 67 0 chr2 14426029 14426126 -236261728 + MIR3 SINE MIR 51 154 -54 2137 116 0 23 chr2 14426873 14427201 -236260653 + AluSq SINE Alu 1 313 0 317 324 76 30 chr2 14427841 14428070 -236259784 - MIR SINE MIR -13 249 10 208 295 90 66 chr2 14428236 14428358 -236259496 + MIR SINE MIR 19 143 -65 700 310 60 62 chr2 14429180 14429709 -236258145 - L1 LINE L1 -2216 3930 3403 692 253 87 33 chr2 14429751 14430083 -236257771 - L1 LINE L1 -2835 3311 2962 421 360 7 7 chr2 14430120 14430273 -236257581 + LTR33 LTR ERVL 28 180 -341 508 219 171 6 chr2 14430387 14430551 -236257303 + LTR33 LTR ERVL 331 521 0 1613 239 67 82 chr2 14430684 14431332 -236256522 + HAL1 LINE L1 1639 2272 -235 2236 95 7 3 chr2 14431332 14431627 -236256227 + AluSc SINE Alu 1 296 -13 1613 239 67 82 chr2 14431627 14431855 -236255999 + HAL1 LINE L1 2272 2502 -5 475 193 129 12 chr2 14431869 14432012 -236255842 + L1PB4 LINE L1 5028 5196 -950 2373 63 0 31 chr2 14432012 14432329 -236255525 + AluY SINE Alu 1 307 -4 475 193 129 12 chr2 14432329 14432356 -236255498 + L1PB4 LINE L1 5196 5218 -928 * 854 247 5 5 chr2 14432344 14432567 -236255287 + L1PB4 LINE L1 5934 6156 0 497 228 15 44 chr2 14433631 14433767 -236254087 - MIR SINE MIR -61 147 16 249 324 104 39 chr2 14434712 14434894 -236252960 + MIR SINE MIR 32 225 -37 1920 147 8 62 chr2 14435159 14435527 -236252327 + THE1A LTR MaLR 1 348 -7 542 257 96 38 chr2 14435617 14435917 -236251937 - MLT1H1 LTR MaLR -129 420 63 193 245 19 38 chr2 14437763 14437816 -236250038 + L2 LINE L2 3188 3239 -33 * 292 225 0 28 chr2 14437812 14437883 -236249971 - MIR SINE MIR 0 262 194 2012 153 0 0 chr2 14438795 14439096 -236248758 - AluSx SINE Alu -11 301 1 1070 217 18 32 chr2 14440265 14440635 -236247219 - MLT2B3 LTR ERVL 0 554 193 196 295 39 26 chr2 14440823 14440901 -236246953 - MIR SINE MIR -17 245 167 2404 58 7 0 chr2 14440901 14441192 -236246662 + AluY SINE Alu 1 293 -18 977 173 40 4 chr2 14441212 14441410 -236246444 - MLT2B3 LTR ERVL -320 200 2 225 184 0 0 chr2 14441439 14441477 -236246377 + L2 LINE L2 3235 3272 0 226 317 73 0 chr2 14442130 14442212 -236245642 + L2 LINE L2 3159 3246 -26 360 218 0 0 chr2 14442223 14442310 -236245544 + (CAG)n Simple_repeat Simple_repeat 2 88 0 395 231 109 101 chr2 14442322 14442560 -236245294 - MIR SINE MIR -3 259 20 221 308 243 0 chr2 14443932 14444039 -236243815 + MIR3 SINE MIR 30 162 -46 617 210 32 0 chr2 14444074 14444198 -236243656 + MER5A DNA MER1_type 1 128 -61 2409 78 7 0 chr2 14444211 14444518 -236243336 + AluY SINE Alu 1 309 -2 195 274 0 0 chr2 14444970 14445021 -236242833 - L3 LINE CR1 -3 1574 1524 * 419 319 42 18 chr2 14445012 14445178 -236242676 - MER5B DNA MER1_type -7 171 2 2351 62 41 0 chr2 14445178 14445469 -236242385 + AluY SINE Alu 1 303 -8 207 0 0 0 chr2 14445494 14445517 -236242337 + (A)n Simple_repeat Simple_repeat 1 23 0 207 291 76 13 chr2 14446377 14446456 -236241398 - MIR SINE MIR -131 131 48 181 286 130 13 chr2 14446470 14446547 -236241307 + MIR3 SINE MIR 112 197 -11 247 307 229 7 chr2 14447626 14447779 -236240075 + MIR SINE MIR 2 188 -74 472 164 0 14 chr2 14448002 14448075 -236239779 - AluS SINE Alu -237 73 2 1298 136 9 33 chr2 14448076 14448289 -236239565 + THE1B LTR MaLR 157 364 0 203 269 103 0 chr2 14448289 14448367 -236239487 + MIR SINE MIR 104 189 -73 380 318 20 26 chr2 14448386 14448537 -236239317 + MIR3 SINE MIR 48 197 -11 2106 242 115 13 chr2 14449290 14449828 -236238026 - MLT1E LTR MaLR 0 593 1 284 299 134 0 chr2 14450415 14450512 -236237342 - L2 LINE L2 -1 3312 3203 321 356 29 11 chr2 14450876 14451050 -236236804 - L2 LINE L2 -541 2773 2597 11851 132 13 8 chr2 14451371 14453187 -236234667 - Tigger1 DNA MER2_type -7 2411 586 3379 141 28 6 chr2 14453474 14454012 -236233842 - Tigger1 DNA MER2_type -1797 621 72 266 338 0 0 chr2 14454749 14454817 -236233037 + MIR3 SINE MIR 93 160 -48 786 265 37 0 chr2 14454904 14455093 -236232761 - MLT1B LTR MaLR -7 383 188 1037 118 59 18 chr2 14455234 14455403 -236232451 - MLT1B LTR MaLR -214 176 1 2416 77 0 0 chr2 14455539 14455836 -236232018 + AluY SINE Alu 1 297 -14 245 155 17 0 chr2 14455838 14455896 -236231958 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 302 368 32 0 chr2 14456112 14456237 -236231617 - L2 LINE L2 -2 3270 3142 347 329 46 46 chr2 14458787 14459024 -236228830 - L2 LINE L2 -836 2478 2242 1448 283 129 51 chr2 14459044 14460976 -236226878 - L1ME3 LINE L1 -15 6950 4849 537 316 59 7 chr2 14461085 14461373 -236226481 - L1ME3 LINE L1 -2426 4515 4213 355 272 56 56 chr2 14461462 14461730 -236226124 - L1ME3 LINE L1 -4546 2576 2309 516 287 127 61 chr2 14461748 14462206 -236225648 - L1ME3 LINE L1 -4866 2065 1632 253 187 116 116 chr2 14462208 14462363 -236225491 - L1ME3 LINE L1 -4962 1461 1307 8974 201 26 16 chr2 14462766 14467199 -236220655 + L1M3f LINE L1 3 4476 -1852 * 21393 160 31 15 chr2 14467198 14467275 -236220579 + L1M1 LINE L1 15 89 -7476 249 57 0 0 chr2 14467275 14467310 -236220544 + (CA)n Simple_repeat Simple_repeat 2 36 0 21393 160 31 15 chr2 14467310 14470829 -236217025 + L1M1 LINE L1 89 3693 -3872 2441 92 0 0 chr2 14470829 14471133 -236216721 + AluY SINE Alu 1 304 -7 21393 160 31 15 chr2 14471133 14471792 -236216062 + L1M1 LINE L1 3693 4340 -3225 26268 42 42 3 chr2 14471792 14475066 -236212788 + L1P LINE L1 1 3399 -2747 389 335 57 5 chr2 14475469 14475663 -236212191 + MIR SINE MIR 27 230 -32 226 304 18 0 chr2 14475696 14475752 -236212102 - L2 LINE L2 -15 3257 3201 866 250 73 88 chr2 14475755 14475974 -236211880 + L1MC4a LINE L1 5380 5601 -2207 5610 87 3 30 chr2 14475974 14476733 -236211121 - L1PA10 LINE L1 -12 6156 5419 866 250 73 88 chr2 14476733 14477045 -236210809 + L1MC4a LINE L1 5601 5903 -1905 801 167 42 0 chr2 14477441 14477585 -236210269 - MLT1A1 LTR MaLR 0 365 216 198 103 0 0 chr2 14477632 14477661 -236210193 + (CTTG)n Simple_repeat Simple_repeat 4 32 0 805 115 0 20 chr2 14477662 14477810 -236210044 + (TTTC)n Simple_repeat Simple_repeat 3 147 0 1377 219 54 3 chr2 14477832 14478306 -236209548 - AluJb SINE Alu 0 489 1 669 233 7 0 chr2 14478312 14478458 -236209396 - MLT1A1 LTR MaLR -218 147 1 2847 242 119 104 chr2 14478470 14479803 -236208051 - MLT1A1-int LTR MaLR -14 1357 5 434 266 40 24 chr2 14480615 14480739 -236207115 - MIR3 SINE MIR -21 187 62 1070 121 153 11 chr2 14481075 14481265 -236206589 + MER20 DNA MER1_type 1 217 -2 207 260 135 21 chr2 14482194 14482290 -236205564 + MIR SINE MIR 30 136 -72 224 354 158 16 chr2 14482856 14482983 -236204871 - L2 LINE L2 0 3272 3128 516 316 146 29 chr2 14482991 14483512 -236204342 - L2 LINE L2 -42 3271 2694 237 333 145 31 chr2 14483597 14483756 -236204098 - MER5B DNA MER1_type -1 177 1 370 297 76 49 chr2 14483893 14484524 -236203330 + L1M4 LINE L1 3689 4325 -1821 524 264 69 86 chr2 14484617 14485094 -236202760 + L1M4 LINE L1 4398 4866 -1280 7633 181 24 8 chr2 14485312 14485493 -236202361 + L1P LINE L1 3740 3917 -2229 2906 9 0 0 chr2 14485493 14485810 -236202044 - AluYb8 SINE Alu -1 317 1 7633 181 24 8 chr2 14485810 14487190 -236200664 + L1P LINE L1 3917 5326 -820 238 160 0 60 chr2 14487464 14487514 -236200340 + MIR SINE MIR 126 172 -90 2306 89 0 0 chr2 14488271 14488578 -236199276 + AluSg SINE Alu 1 307 0 2496 103 6 0 chr2 14489107 14489456 -236198398 + L1PA8A LINE L1 5763 6113 -18 207 0 0 0 chr2 14489460 14489483 -236198371 + (TAA)n Simple_repeat Simple_repeat 2 24 0 204 363 25 6 chr2 14489644 14489747 -236198107 - MIR SINE MIR -87 121 19 21 57 0 0 chr2 14490443 14490478 -236197376 + AT_rich Low_complexity Low_complexity 1 35 0 232 306 82 20 chr2 14490929 14491076 -236196778 + L2 LINE L2 2907 3062 -210 232 353 53 30 chr2 14491174 14491307 -236196547 + L2 LINE L2 3118 3253 -19 367 362 14 14 chr2 14491635 14491773 -236196081 - L3 LINE CR1 -7 1570 1433 2075 208 70 25 chr2 14491798 14492356 -236195498 + MLT1E2 LTR MaLR 37 619 -7 546 275 114 0 chr2 14492360 14492553 -236195301 - L3 LINE CR1 -122 1455 1241 378 283 7 14 chr2 14492969 14493107 -236194747 + L1MEc LINE L1 44 180 -6216 375 376 5 9 chr2 14493192 14493402 -236194452 + L1MEc LINE L1 196 404 -5992 468 347 42 62 chr2 14493483 14493606 -236194248 + L1MEc LINE L1 543 667 -5729 1208 234 86 27 chr2 14493606 14494047 -236193807 + MLT1C LTR MaLR 1 467 0 468 347 42 62 chr2 14494047 14494326 -236193528 + L1MEc LINE L1 667 937 -5459 200 373 0 17 chr2 14494503 14494562 -236193292 + MIR SINE MIR 46 103 -159 241 164 104 45 chr2 14494687 14494754 -236193100 + MLT1K LTR MaLR 179 249 -339 364 213 13 0 chr2 14495685 14495760 -236192094 - MIR SINE MIR -69 139 64 180 214 0 89 chr2 14496265 14496321 -236191533 + L3 LINE CR1 1214 1264 -313 502 291 135 13 chr2 14496444 14496674 -236191180 - MIR SINE MIR 0 262 5 312 321 47 74 chr2 14497250 14497440 -236190414 + HAL1 LINE L1 370 554 -1953 1428 261 98 40 chr2 14497592 14498513 -236189341 + HAL1 LINE L1 738 1711 -796 313 289 120 67 chr2 14498601 14498826 -236189028 + MLT1J2 LTR MaLR 56 292 -158 681 304 106 37 chr2 14498965 14499455 -236188399 + MLT1H1 LTR MaLR 32 555 0 244 290 154 44 chr2 14499469 14499904 -236187950 + HAL1 LINE L1 1720 2202 -305 657 296 82 10 chr2 14500060 14500266 -236187588 + MIR SINE MIR 20 240 -22 316 361 42 0 chr2 14500465 14500584 -236187270 + MIR SINE MIR 121 244 -18 299 287 197 28 chr2 14500633 14500887 -236186967 + L3b LINE CR1 1165 1461 -122 184 299 0 15 chr2 14501104 14501171 -236186683 + L3b LINE CR1 1165 1230 -353 27 0 0 0 chr2 14503953 14503980 -236183874 + AT_rich Low_complexity Low_complexity 1 27 0 199 180 20 60 chr2 14504526 14504576 -236183278 - MIR3 SINE MIR -2 206 159 291 54 0 0 chr2 14506321 14506358 -236181496 + (TG)n Simple_repeat Simple_repeat 2 38 0 1733 93 0 24 chr2 14506376 14506624 -236181230 + AluSx SINE Alu 64 305 -7 278 312 113 30 chr2 14506764 14507101 -236180753 + L1ME4a LINE L1 5699 6063 -58 1990 118 0 36 chr2 14507168 14507472 -236180382 + AluSx SINE Alu 1 293 -19 690 181 8 15 chr2 14507668 14507801 -236180053 - FLAM_A SINE Alu -1 132 1 197 149 85 21 chr2 14508213 14508260 -236179594 - MIR SINE MIR -114 94 45 32 0 0 0 chr2 14508292 14508324 -236179530 + AT_rich Low_complexity Low_complexity 1 32 0 627 223 38 13 chr2 14508561 14508718 -236179136 + MER5B DNA MER1_type 4 164 -14 477 157 293 14 chr2 14508723 14508863 -236178991 + MER5A DNA MER1_type 11 189 0 337 281 74 8 chr2 14509432 14509553 -236178301 - MER94 DNA DNA -1 133 5 371 281 55 43 chr2 14510135 14510299 -236177555 - MIR SINE MIR -12 250 85 22 0 0 0 chr2 14510840 14510862 -236176992 + AT_rich Low_complexity Low_complexity 1 22 0 186 340 46 59 chr2 14510896 14511049 -236176805 - L2 LINE L2 -11 3261 3111 211 367 54 34 chr2 14511102 14511249 -236176605 + L2 LINE L2 3123 3272 0 330 252 48 19 chr2 14511993 14512096 -236175758 - MER5A DNA MER1_type -21 168 63 2358 54 0 0 chr2 14512098 14512393 -236175461 - L1PA4 LINE L1 -1 6154 5860 249 59 0 0 chr2 14512393 14512427 -236175427 + L1PA4 LINE L1 5830 5863 -291 646 204 116 0 chr2 14512767 14512914 -236174940 - FAM SINE Alu -10 165 2 478 341 38 19 chr2 14513264 14513475 -236174379 - MIR SINE MIR -7 255 41 1124 136 16 62 chr2 14514129 14514371 -236173483 + L1PA14 LINE L1 5930 6160 -1 1607 186 42 8 chr2 14514509 14514870 -236172984 - L1MA9 LINE L1 -1 6311 5939 2130 135 122 13 chr2 14516410 14516796 -236171058 + MSTA LTR MaLR 1 428 0 202 359 51 26 chr2 14516833 14516950 -236170904 + MIR SINE MIR 34 153 -109 238 359 81 20 chr2 14517855 14518053 -236169801 - MIR SINE MIR -20 242 33 182 118 29 0 chr2 14518308 14518342 -236169512 + (TA)n Simple_repeat Simple_repeat 1 35 0 1439 104 5 5 chr2 14518662 14518883 -236168971 - pTR5 LTR ERV1 -2046 392 172 294 214 31 20 chr2 14518886 14518984 -236168870 - LTR30 LTR ERV1 -80 642 544 4659 129 95 67 chr2 14518984 14520136 -236167718 - pTR5 LTR ERV1 -413 2025 743 410 329 154 8 chr2 14520387 14520627 -236167227 - L2 LINE L2 0 3313 3039 1407 201 7 34 chr2 14521547 14521845 -236166009 - AluJb SINE Alu -21 291 2 1124 197 12 8 chr2 14522156 14522400 -236165454 - L1MB1 LINE L1 -1 6167 5923 219 250 40 26 chr2 14522525 14522601 -236165253 - MIR SINE MIR -95 113 37 319 347 78 4 chr2 14523239 14523484 -236164370 + L1ME LINE L1 5556 5818 -303 461 291 63 13 chr2 14524830 14524988 -236162866 + MIR SINE MIR 20 185 -77 28 0 0 0 chr2 14525841 14525869 -236161985 + AT_rich Low_complexity Low_complexity 1 28 0 322 301 44 64 chr2 14525919 14526112 -236161742 - MIR SINE MIR -60 202 12 351 65 0 0 chr2 14526637 14526683 -236161171 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 384 181 0 0 chr2 14526674 14526757 -236161097 + (TA)n Simple_repeat Simple_repeat 1 83 0 22 0 0 0 chr2 14527329 14527351 -236160503 + AT_rich Low_complexity Low_complexity 1 22 0 273 327 46 33 chr2 14527761 14527914 -236159940 - MIR SINE MIR -96 166 12 13601 195 27 33 chr2 14528455 14529899 -236157955 + L1MA5A LINE L1 1045 2496 -4443 2067 129 3 3 chr2 14529899 14530194 -236157660 - AluSx SINE Alu -17 295 1 13601 195 27 33 chr2 14530194 14530539 -236157315 + L1MA5A LINE L1 2496 2842 -4097 1840 164 7 7 chr2 14530539 14530826 -236157028 + AluSx SINE Alu 1 287 -25 13601 195 27 33 chr2 14530826 14533091 -236154763 + L1MA5A LINE L1 2842 5119 -1820 1820 143 97 32 chr2 14533091 14533433 -236154421 - THE1B LTR MaLR 0 364 1 13601 195 27 33 chr2 14533433 14533885 -236153969 + L1MA5A LINE L1 5119 5572 -1367 1230 102 23 0 chr2 14533885 14534061 -236153793 - L1MA2 LINE L1 0 6304 6125 13601 195 27 33 chr2 14534061 14535475 -236152379 + L1MA5A LINE L1 5572 6937 -2 1665 213 25 17 chr2 14536650 14537012 -236150842 + MLT1A1 LTR MaLR 1 365 0 333 338 66 7 chr2 14537039 14537175 -236150679 - MIR SINE MIR -116 146 3 241 326 103 87 chr2 14537929 14537987 -236149867 - L2 LINE L2 -10 3262 3206 2067 120 0 23 chr2 14537987 14538287 -236149567 + AluSx SINE Alu 1 293 -19 241 326 103 87 chr2 14538287 14538412 -236149442 - L2 LINE L2 -66 3206 3076 194 320 72 52 chr2 14538497 14538594 -236149260 - L2 LINE L2 -202 3070 2972 321 191 58 164 chr2 14538944 14539133 -236148721 - LTR16A LTR ERVL -2 448 280 206 313 152 0 chr2 14539226 14539325 -236148529 + MIR SINE MIR 139 252 -10 480 274 176 49 chr2 14539501 14539870 -236147984 + L2 LINE L2 2291 2706 -608 23 54 0 0 chr2 14539884 14539921 -236147933 + AT_rich Low_complexity Low_complexity 1 37 0 551 292 73 61 chr2 14540169 14540844 -236147010 - L1ME2 LINE L1 -217 5947 5265 4864 118 22 20 chr2 14540996 14541762 -236146092 - L1PA15 LINE L1 0 6165 5398 1910 303 47 47 chr2 14541868 14542570 -236145284 + MER57-int LTR ERV1 6233 6937 -600 2138 119 0 7 chr2 14542570 14542872 -236144982 - AluSx SINE Alu -8 304 5 1910 303 47 47 chr2 14542872 14543081 -236144773 + MER57-int LTR ERV1 6936 7144 -393 804 187 215 124 chr2 14543081 14543455 -236144399 + MER57B LTR ERV1 1 403 0 648 241 126 0 chr2 14544089 14544263 -236143591 + L3 LINE CR1 1264 1459 -118 302 331 105 8 chr2 14544433 14544557 -236143297 + MIR SINE MIR 46 181 -81 192 250 33 33 chr2 14545974 14546034 -236141820 + L2 LINE L2 3242 3301 -12 1668 212 66 20 chr2 14547118 14547467 -236140387 - MLT1A1 LTR MaLR 0 365 1 412 321 73 0 chr2 14548473 14548638 -236139216 + MIR SINE MIR 8 184 -78 195 300 0 0 chr2 14549129 14549169 -236138685 - MIR SINE MIR -163 99 60 2028 148 45 35 chr2 14550131 14550508 -236137346 + L1MB2 LINE L1 5779 6159 -12 336 102 0 0 chr2 14550510 14550559 -236137295 + (CA)n Simple_repeat Simple_repeat 1 49 0 354 335 57 0 chr2 14550575 14550733 -236137121 + MIR SINE MIR 20 186 -76 296 345 57 11 chr2 14550778 14550955 -236136899 - L2 LINE L2 -504 2810 2626 191 278 37 0 chr2 14551330 14551384 -236136470 + MIR3 SINE MIR 144 199 -9 320 275 91 27 chr2 14551803 14551943 -236135911 + MIR SINE MIR 7 151 -61 325 258 0 94 chr2 14554168 14554296 -236133558 - MER5B DNA MER1_type -62 116 1 2355 94 0 3 chr2 14554524 14554823 -236133031 - AluSx SINE Alu -14 298 1 285 232 21 84 chr2 14555055 14555150 -236132704 + MIR SINE MIR 18 106 -156 210 204 23 0 chr2 14555168 14555212 -236132642 - MIR SINE MIR -109 153 109 365 253 12 0 chr2 14555721 14555804 -236132050 + MIR3 SINE MIR 90 173 -35 233 298 128 66 chr2 14557196 14557427 -236130427 - MIR3 SINE MIR -10 252 4 386 318 106 23 chr2 14558288 14558505 -236129349 - MIR SINE MIR -27 235 1 2172 108 10 3 chr2 14559349 14559654 -236128200 - AluSq SINE Alu -6 307 1 192 326 20 0 chr2 14559667 14559716 -236128138 + L2 LINE L2 3129 3178 -94 483 232 42 28 chr2 14560369 14560511 -236127343 + L2 LINE L2 3166 3309 -4 343 309 112 78 chr2 14562121 14562367 -236125487 - L1ME4a LINE L1 -225 5896 5660 2172 169 37 5 chr2 14562367 14562745 -236125109 + MLT1B LTR MaLR 1 390 0 343 309 112 78 chr2 14562745 14563026 -236124828 - L1ME4a LINE L1 -461 5660 5351 372 293 176 24 chr2 14563560 14563765 -236124089 + MIR SINE MIR 20 255 -7 348 265 37 22 chr2 14565051 14565187 -236122667 + L3 LINE CR1 1223 1360 -217 330 239 261 23 chr2 14565438 14565568 -236122286 + MIR SINE MIR 8 168 -94 2280 77 30 0 chr2 14565691 14565991 -236121863 - AluY SINE Alu -2 309 1 1346 222 121 27 chr2 14566994 14567185 -236120669 + L1MD2 LINE L1 5914 6086 -273 231 36 0 0 chr2 14567185 14567213 -236120641 + (CA)n Simple_repeat Simple_repeat 2 29 0 1346 222 121 27 chr2 14567213 14567293 -236120561 + L1MD2 LINE L1 6086 6157 -202 1176 151 84 36 chr2 14567293 14567518 -236120336 - MER46A DNA MER2_type 0 236 1 1346 222 121 27 chr2 14567518 14567650 -236120204 + L1MD2 LINE L1 6157 6356 -3 240 174 0 70 chr2 14568912 14568998 -236118856 + (TATATG)n Simple_repeat Simple_repeat 2 81 0 228 322 11 23 chr2 14569460 14569547 -236118307 + L2 LINE L2 3182 3267 -5 305 301 14 27 chr2 14569982 14570128 -236117726 - L1ME4a LINE L1 -209 5912 5769 639 179 138 0 chr2 14571390 14571535 -236116319 + MER3 DNA MER1_type 40 204 -5 191 347 194 10 chr2 14571549 14571647 -236116207 + L2 LINE L2 2909 3024 -248 279 232 62 54 chr2 14573008 14573120 -236114734 - MIR SINE MIR -54 208 96 266 304 25 0 chr2 14574310 14574389 -236113465 - MIR3 SINE MIR -46 162 82 3271 144 22 38 chr2 14574936 14575470 -236112384 - MER1A DNA MER1_type -1 526 1 203 328 85 21 chr2 14575833 14576022 -236111832 + MIR SINE MIR 31 231 -31 240 227 160 0 chr2 14576794 14576869 -236110985 - L1MC4 LINE L1 -1341 6701 6615 242 194 16 0 chr2 14576873 14576935 -236110919 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 266 227 20 193 chr2 14577832 14577982 -236109872 + MIR SINE MIR 20 143 -119 222 118 0 0 chr2 14578104 14578138 -236109716 + (TTA)n Simple_repeat Simple_repeat 2 35 0 201 356 37 15 chr2 14579652 14579787 -236108067 + MER5A DNA MER1_type 17 154 -35 512 269 72 14 chr2 14580410 14580618 -236107236 + MIR SINE MIR 2 221 -41 22 35 0 0 chr2 14581199 14581228 -236106626 + AT_rich Low_complexity Low_complexity 1 29 0 287 262 148 49 chr2 14582278 14582400 -236105454 - MIR SINE MIR -71 191 58 1008 260 54 80 chr2 14582572 14583057 -236104797 + L2 LINE L2 2841 3312 -1 213 39 0 0 chr2 14583076 14583102 -236104752 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 27 29 0 0 chr2 14583109 14583143 -236104711 + AT_rich Low_complexity Low_complexity 1 34 0 767 320 28 49 chr2 14584534 14584818 -236103036 + L1MDb LINE L1 138 415 -6128 2235 220 99 27 chr2 14584823 14585522 -236102332 + L1MDb LINE L1 1531 2279 -4261 795 251 52 21 chr2 14585526 14585853 -236102001 + L1M4 LINE L1 4080 4416 -1730 634 211 58 2 chr2 14585866 14586065 -236101789 + MSTC LTR MaLR 1 210 -186 685 151 196 22 chr2 14586066 14586245 -236101609 + L1MD2 LINE L1 5870 6079 -280 3884 165 10 14 chr2 14586245 14586959 -236100895 + MER50 LTR ERV1 1 711 -23 1406 173 14 14 chr2 14586959 14587243 -236100611 + L1MD2 LINE L1 6075 6358 -1 251 306 74 46 chr2 14588061 14588169 -236099685 + MIR SINE MIR 65 175 -87 2409 76 0 3 chr2 14589571 14589872 -236097982 + AluY SINE Alu 1 300 -11 291 344 65 19 chr2 14590422 14590576 -236097278 + MIR SINE MIR 100 260 -2 1878 157 41 3 chr2 14590623 14590917 -236096937 - AluJb SINE Alu -7 305 1 240 233 0 0 chr2 14592244 14592287 -236095567 + MIR SINE MIR 206 248 -14 2144 96 7 0 chr2 14593239 14593564 -236094290 - AluSp SINE Alu 0 327 1 382 254 94 43 chr2 14593688 14593826 -236094028 + MIR SINE MIR 40 184 -78 355 316 68 23 chr2 14593961 14594138 -236093716 + MIR SINE MIR 66 250 -12 957 209 145 59 chr2 14594448 14594573 -236093281 + L1MC4a LINE L1 6138 6251 -1557 570 71 0 0 chr2 14594573 14594657 -236093197 + (TG)n Simple_repeat Simple_repeat 1 84 0 957 209 145 59 chr2 14594657 14594703 -236093151 + L1MC4a LINE L1 6251 6292 -1516 1652 190 16 10 chr2 14594703 14595013 -236092841 + AluJo SINE Alu 1 312 0 957 209 145 59 chr2 14595013 14595246 -236092608 + L1MC4a LINE L1 6292 6578 -1230 3917 66 2 0 chr2 14595246 14595748 -236092106 + L1PA5 LINE L1 5652 6154 0 2350 120 20 32 chr2 14595784 14596335 -236091519 + L1MA2 LINE L1 3207 3749 -3816 1315 225 68 6 chr2 14596335 14596673 -236091181 + THE1B LTR MaLR 6 364 0 8673 138 38 43 chr2 14596675 14598261 -236089593 + THE1C-int LTR MaLR 3 1580 0 1628 168 85 26 chr2 14598263 14598615 -236089239 + THE1C LTR MaLR 3 375 0 3347 223 52 15 chr2 14598626 14598801 -236089053 + L1MA2 LINE L1 3769 3936 -3629 2115 122 47 39 chr2 14598801 14599162 -236088692 - THE1B LTR MaLR 0 364 1 3347 223 52 15 chr2 14599162 14600250 -236087604 + L1MA2 LINE L1 3936 5140 -2425 * 6537 134 10 2 chr2 14600246 14602003 -236085851 + L1MA2 LINE L1 5955 7723 0 368 243 114 4 chr2 14602026 14602236 -236085618 + L1MD3 LINE L1 7559 7985 0 268 349 77 0 chr2 14602924 14603119 -236084735 + L2 LINE L2 2610 2819 -495 2355 104 41 16 chr2 14603300 14603665 -236084189 + THE1C LTR MaLR 1 374 -1 500 272 66 0 chr2 14603769 14603905 -236083949 - MIR SINE MIR -51 211 67 254 354 0 0 chr2 14603934 14604013 -236083841 + L2 LINE L2 3186 3264 -8 212 371 34 34 chr2 14604291 14604380 -236083474 + MIR SINE MIR 3 91 -171 190 210 290 16 chr2 14604853 14604915 -236082939 + MIR SINE MIR 23 101 -107 212 306 97 93 chr2 14604966 14605182 -236082672 - L2 LINE L2 -94 3219 3003 * 324 333 0 18 chr2 14605173 14605287 -236082567 + MIR3 SINE MIR 93 204 -4 189 336 63 35 chr2 14606468 14606611 -236081243 - MIR3 SINE MIR -46 162 16 21 0 0 0 chr2 14608621 14608642 -236079212 + AT_rich Low_complexity Low_complexity 1 21 0 2004 119 13 23 chr2 14609151 14609454 -236078400 - AluSx SINE Alu -12 300 1 6141 64 6 73 chr2 14610048 14611019 -236076835 - SVA Other Other 0 1386 481 182 308 0 15 chr2 14612062 14612127 -236075727 + MIR SINE MIR 186 249 -13 601 307 4 57 chr2 14612621 14612865 -236074989 + MIR SINE MIR 18 248 -14 312 252 135 1 chr2 14613403 14613503 -236074351 - MIR SINE MIR -93 115 3 227 316 53 0 chr2 14613975 14614108 -236073746 + L1MC4 LINE L1 7898 8037 -5 2033 99 0 0 chr2 14614309 14614571 -236073283 + AluSc SINE Alu 35 296 -13 569 209 223 0 chr2 14616664 14616812 -236071042 + MER5A DNA MER1_type 9 189 0 354 229 82 16 chr2 14616873 14616995 -236070859 + MIR SINE MIR 107 236 -26 1762 179 39 6 chr2 14617519 14617876 -236069978 - L1MA6 LINE L1 -1877 4269 3901 * 5265 157 37 25 chr2 14617874 14619786 -236068068 + L1MA6 LINE L1 4276 6236 -64 2327 113 3 0 chr2 14619786 14620097 -236067757 + AluSx SINE Alu 1 312 0 5265 157 37 25 chr2 14620097 14620163 -236067691 + L1MA6 LINE L1 6236 6300 0 2203 120 3 3 chr2 14620226 14620535 -236067319 + AluSq SINE Alu 1 309 -4 189 0 0 0 chr2 14621120 14621141 -236066713 + (A)n Simple_repeat Simple_repeat 1 21 0 242 355 118 18 chr2 14621616 14621895 -236065959 + L2 LINE L2 2936 3242 -30 325 277 50 0 chr2 14622165 14622266 -236065588 + MIR SINE MIR 46 151 -111 405 174 91 50 chr2 14623606 14623727 -236064127 - MIR SINE MIR -7 255 130 321 313 116 45 chr2 14625611 14625835 -236062019 + MIR SINE MIR 12 251 -11 558 272 119 25 chr2 14625870 14626072 -236061782 - MIR SINE MIR -1 261 41 605 230 72 34 chr2 14626284 14626549 -236061305 + L1MC5 LINE L1 7611 7885 -76 181 197 0 99 chr2 14626571 14626642 -236061212 - MIR SINE MIR -82 180 117 1653 128 135 4 chr2 14627008 14627282 -236060572 + AluJb SINE Alu 1 310 -2 37 81 0 0 chr2 14627323 14627409 -236060445 + AT_rich Low_complexity Low_complexity 1 86 0 1186 95 0 24 chr2 14628287 14628498 -236059356 - AluSg/x SINE Alu 0 335 127 2359 76 0 7 chr2 14628498 14628801 -236059053 - AluSg SINE Alu -9 301 1 386 356 53 22 chr2 14629718 14630038 -236057816 + L1ME4a LINE L1 5630 5959 -162 255 61 0 0 chr2 14630096 14630129 -236057725 + (TG)n Simple_repeat Simple_repeat 2 34 0 212 161 0 18 chr2 14630129 14630147 -236057707 + (TA)n Simple_repeat Simple_repeat 2 19 -37 1165 162 83 5 chr2 14630147 14630363 -236057491 - MER46A DNA MER2_type -3 233 1 212 161 0 18 chr2 14630363 14630400 -236057454 + (TA)n Simple_repeat Simple_repeat 19 56 0 183 80 0 0 chr2 14630416 14630441 -236057413 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 21 36 0 0 chr2 14630619 14630647 -236057207 + AT_rich Low_complexity Low_complexity 1 28 0 2020 81 0 50 chr2 14631065 14631362 -236056492 + AluY SINE Alu 19 300 -11 239 339 39 31 chr2 14631658 14631785 -236056069 - MIR SINE MIR -60 148 21 446 301 142 19 chr2 14632203 14632412 -236055442 + MIR SINE MIR 10 248 -14 198 323 48 16 chr2 14632541 14632665 -236055189 + L2 LINE L2 2776 2903 -411 690 201 14 0 chr2 14633739 14633878 -236053976 + L2 LINE L2 2501 2641 -673 392 297 117 34 chr2 14633929 14634168 -236053686 + MLT1J1 LTR MaLR 65 323 -123 572 266 123 30 chr2 14635815 14636233 -236051621 + L2 LINE L2 2677 3128 -185 205 327 18 0 chr2 14636263 14636318 -236051536 + L2 LINE L2 3230 3285 -28 564 77 0 0 chr2 14636326 14636404 -236051450 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 685 253 10 21 chr2 14636515 14636709 -236051145 - MER58C DNA MER1_type -23 192 1 387 374 37 41 chr2 14636938 14637184 -236050670 + L2 LINE L2 3027 3271 -1 350 283 68 118 chr2 14637477 14637859 -236049995 - L2 LINE L2 -1 3271 2909 406 151 0 0 chr2 14637878 14637951 -236049903 - MER41B LTR ERV1 -1 634 562 2567 116 50 0 chr2 14637951 14638390 -236049464 + L1PA7 LINE L1 1976 2436 -3710 303 163 0 0 chr2 14638407 14638487 -236049367 + (TA)n Simple_repeat Simple_repeat 1 80 0 20594 77 8 0 chr2 14638525 14642196 -236045658 + L1PA7 LINE L1 2480 6154 0 3108 101 30 0 chr2 14642207 14642672 -236045182 - MER41A LTR ERV1 -75 479 1 2399 87 3 0 chr2 14642944 14643255 -236044599 + AluSp SINE Alu 2 313 0 471 341 82 39 chr2 14643490 14643795 -236044059 - L2 LINE L2 -14 3258 2941 944 240 93 20 chr2 14644219 14644519 -236043335 + Charlie2 DNA MER1_type 1 322 -2460 2967 158 128 11 chr2 14644535 14645168 -236042686 + LTR8A LTR ERV1 2 708 -19 245 179 0 36 chr2 14645201 14645257 -236042597 + Charlie2 DNA MER1_type 1878 1931 -931 7517 184 31 12 chr2 14645288 14645630 -236042224 - L1PB1 LINE L1 -9 6142 5808 207 0 0 0 chr2 14645630 14645653 -236042201 + (TG)n Simple_repeat Simple_repeat 1 23 0 7517 184 31 12 chr2 14645653 14647020 -236040834 - L1PB1 LINE L1 -343 5808 4354 180 0 0 0 chr2 14647020 14647040 -236040814 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7517 184 31 12 chr2 14647040 14648116 -236039738 - L1PB1 LINE L1 -1797 4354 3301 1915 127 22 0 chr2 14648123 14648399 -236039455 - AluSx SINE Alu -10 302 21 1209 216 60 24 chr2 14648399 14648769 -236039085 + Charlie2 DNA MER1_type 1916 2298 -564 4519 59 26 17 chr2 14648780 14649808 -236038046 + MER11A LTR ERVK 1 1266 0 238 250 168 53 chr2 14649808 14650008 -236037846 + Charlie2 DNA MER1_type 2308 2531 -331 1393 207 90 18 chr2 14650008 14650490 -236037364 + MER67B LTR ERV1 1 418 -243 436 233 38 18 chr2 14650461 14650692 -236037162 + MER67A LTR ERV1 273 543 0 * 522 189 161 23 chr2 14650714 14650931 -236036923 + Charlie2 DNA MER1_type 2555 2801 -61 291 330 45 27 chr2 14650999 14651111 -236036743 + MER5A DNA MER1_type 7 120 -69 279 116 0 0 chr2 14651468 14651511 -236036343 + MER112 DNA MER1_type 1 43 -217 407 298 61 17 chr2 14652982 14653163 -236034691 + MLT1K LTR MaLR 383 571 -17 181 331 169 0 chr2 14653207 14653331 -236034523 - MIR3 SINE MIR -62 146 2 835 181 0 0 chr2 14653878 14654011 -236033843 - AluJb SINE Alu -23 289 157 724 152 0 0 chr2 14654013 14654118 -236033736 - AluSq/x SINE Alu -206 107 3 225 355 59 33 chr2 14654122 14654274 -236033580 + L2 LINE L2 2688 2843 -471 350 337 84 17 chr2 14655339 14655517 -236032337 + MIR SINE MIR 12 201 -61 1940 121 95 14 chr2 14656666 14657013 -236030841 + THE1C LTR MaLR 1 375 0 388 241 0 46 chr2 14657087 14657195 -236030659 + L2 LINE L2 1245 1347 -1967 250 329 24 0 chr2 14657195 14657280 -236030574 + L2 LINE L2 1499 1585 -1729 26 0 0 0 chr2 14657298 14657324 -236030530 + AT_rich Low_complexity Low_complexity 1 26 0 681 321 60 0 chr2 14657395 14657647 -236030207 + L2 LINE L2 2069 2335 -979 414 89 89 54 chr2 14657649 14657761 -236030093 - L1MD3 LINE L1 -1 7994 7879 223 369 83 0 chr2 14657932 14658016 -236029838 + L2 LINE L2 3145 3235 -37 22 0 0 0 chr2 14658427 14658449 -236029405 + AT_rich Low_complexity Low_complexity 1 22 0 514 236 208 5 chr2 14659099 14659315 -236028539 + Charlie5 DNA MER1_type 2364 2623 0 23 0 0 0 chr2 14660061 14660084 -236027770 + AT_rich Low_complexity Low_complexity 1 23 0 3664 175 64 9 chr2 14660165 14660902 -236026952 + Charlie1 DNA MER1_type 1851 2643 -118 1905 118 56 7 chr2 14660902 14661189 -236026665 - AluSc SINE Alu -8 301 1 3664 175 64 9 chr2 14661189 14661309 -236026545 + Charlie1 DNA MER1_type 2643 2755 -6 354 285 181 7 chr2 14664204 14664348 -236023506 + MIR SINE MIR 1 169 -93 226 301 12 48 chr2 14664412 14664495 -236023359 - MIR SINE MIR -175 87 8 2194 91 7 24 chr2 14664520 14664818 -236023036 + AluY SINE Alu 1 293 -18 2067 128 0 55 chr2 14665482 14665809 -236022045 - AluSx SINE Alu -3 309 1 328 283 19 19 chr2 14666698 14666814 -236021040 + MIR SINE MIR 40 154 -70 467 374 28 0 chr2 14667294 14667473 -236020381 + MIR3 SINE MIR 16 199 -9 268 397 11 35 chr2 14669128 14669302 -236018552 + L2 LINE L2 3096 3265 -7 207 289 0 0 chr2 14669329 14669374 -236018480 - L2 LINE L2 -23 3249 3205 185 309 18 0 chr2 14669982 14670037 -236017817 - MIR SINE MIR -64 144 89 233 216 10 69 chr2 14671057 14671159 -236016695 + GA-rich Low_complexity Low_complexity 3 98 0 323 220 212 0 chr2 14671204 14671322 -236016532 - MIR SINE MIR -64 198 56 285 330 113 22 chr2 14672257 14672442 -236015412 - MIR SINE MIR 0 262 61 522 277 181 70 chr2 14673513 14673906 -236013948 + L2 LINE L2 2839 3269 -3 2570 98 13 16 chr2 14674028 14674404 -236013450 + THE1C LTR MaLR 1 375 0 305 327 102 29 chr2 14674414 14674619 -236013235 - MIR SINE MIR -38 224 5 328 349 8 23 chr2 14675046 14675175 -236012679 - MIR SINE MIR -111 151 25 920 330 63 67 chr2 14675989 14676383 -236011471 + L2 LINE L2 1947 2341 -931 2162 109 0 23 chr2 14676383 14676686 -236011168 - AluSx SINE Alu -16 296 1 920 330 63 67 chr2 14676686 14677625 -236010229 + L2 LINE L2 2341 3272 0 720 166 41 59 chr2 14678130 14678299 -236009555 + MER20 DNA MER1_type 1 166 -53 322 333 105 18 chr2 14678895 14679066 -236008788 - L2 LINE L2 -2 3270 3085 472 216 60 65 chr2 14679565 14679750 -236008104 - MER58C DNA MER1_type 0 215 32 1419 198 38 42 chr2 14679791 14679905 -236007949 - AluJo SINE Alu 0 312 199 183 80 0 0 chr2 14679905 14679930 -236007924 + (CCCA)n Simple_repeat Simple_repeat 2 26 0 1419 198 38 42 chr2 14679930 14680128 -236007726 - AluJo SINE Alu -113 199 1 2130 129 7 3 chr2 14680442 14680745 -236007109 + AluSc SINE Alu 1 304 -5 474 154 46 0 chr2 14680745 14680875 -236006979 + GA-rich Low_complexity Low_complexity 2 137 0 305 312 214 0 chr2 14681322 14681476 -236006378 + MIR3 SINE MIR 19 205 -3 707 267 42 33 chr2 14681918 14682158 -236005696 + MIR SINE MIR 14 255 -7 1890 134 0 50 chr2 14682709 14683007 -236004847 - AluSx SINE Alu -25 287 5 347 356 141 20 chr2 14684759 14685065 -236002789 - L2 LINE L2 -1 3271 2929 433 299 66 6 chr2 14686145 14686312 -236001542 + MIR SINE MIR 73 249 -13 247 333 111 21 chr2 14686510 14686654 -236001200 + MIR SINE MIR 26 182 -80 219 333 83 0 chr2 14686871 14686955 -236000899 + MIR3 SINE MIR 104 194 -14 1717 142 60 11 chr2 14686983 14687280 -236000574 + AluSx SINE Alu 1 310 0 1370 159 4 37 chr2 14687322 14687599 -236000255 + AluJo SINE Alu 48 316 0 253 309 114 57 chr2 14687815 14687990 -235999864 - MIR SINE MIR -59 203 19 1840 148 143 13 chr2 14688081 14688460 -235999394 + MSTA LTR MaLR 1 428 0 231 61 0 0 chr2 14688583 14688616 -235999238 + (TG)n Simple_repeat Simple_repeat 2 34 0 755 160 0 30 chr2 14688785 14688916 -235998938 + FLAM_C SINE Alu 1 127 -16 554 151 123 84 chr2 14692116 14692295 -235995559 - MER21A LTR ERV1 0 931 746 277 267 12 12 chr2 14692293 14692379 -235995475 - MLT2A2 LTR ERVL -175 278 193 * 187 317 0 87 chr2 14692428 14692532 -235995322 - L2 LINE L2 -164 3108 3014 261 365 33 43 chr2 14692656 14692867 -235994987 - L2 LINE L2 -556 2758 2550 2040 171 35 29 chr2 14693383 14693934 -235993920 + MLT2A2 LTR ERVL 1 554 0 1963 146 58 22 chr2 14694794 14695156 -235992698 + THE1C LTR MaLR 1 375 0 2668 129 21 5 chr2 14695156 14695638 -235992216 + THE1C-int LTR MaLR 1 486 -1150 1300 102 5 15 chr2 14695647 14695844 -235992010 + THE1C-int LTR MaLR 1386 1580 0 1833 134 62 56 chr2 14695844 14696176 -235991678 + THE1C LTR MaLR 1 337 -38 2299 91 20 0 chr2 14696176 14696473 -235991381 - AluSq SINE Alu -10 303 1 1833 134 62 56 chr2 14696473 14696513 -235991341 + THE1C LTR MaLR 337 375 0 2080 24 0 0 chr2 14699368 14699618 -235988236 - L1P LINE L1 -1976 4170 3921 1186 0 0 0 chr2 14699618 14699780 -235988074 + L1PA3 LINE L1 6014 6176 0 516 254 90 25 chr2 14701393 14701637 -235986217 + MER74B LTR ERVL 363 622 0 1001 172 78 16 chr2 14701782 14702038 -235985816 - MER46C DNA MER2_type -39 299 28 1488 210 7 23 chr2 14702993 14703303 -235984551 - AluJo SINE Alu -7 305 1 25 75 0 0 chr2 14703980 14704033 -235983821 + AT_rich Low_complexity Low_complexity 1 53 0 363 250 19 28 chr2 14704279 14704387 -235983467 - L1MC/D LINE L1 -2124 5684 5578 582 244 54 66 chr2 14704732 14704798 -235983056 + L1ME LINE L1 39 104 -5966 1936 151 0 22 chr2 14704798 14705117 -235982737 + AluSx SINE Alu 1 312 0 582 244 54 66 chr2 14705117 14705308 -235982546 + L1ME LINE L1 104 293 -5777 1359 228 84 39 chr2 14705343 14705878 -235981976 + L1ME2 LINE L1 5579 6137 -27 25 0 0 0 chr2 14706824 14706849 -235981005 + AT_rich Low_complexity Low_complexity 1 25 0 35634 87 8 8 chr2 14706981 14713158 -235974696 + L1PA6 LINE L1 11 6154 0 21 36 0 0 chr2 14713689 14713717 -235974137 + AT_rich Low_complexity Low_complexity 1 28 0 1377 181 4 20 chr2 14714311 14714608 -235973246 + AluJo SINE Alu 37 329 0 191 349 0 0 chr2 14714671 14714734 -235973120 - MER5B DNA MER1_type -113 65 3 204 269 0 0 chr2 14714889 14714941 -235972913 - MIR SINE MIR -111 151 100 374 324 79 79 chr2 14715132 14715450 -235972404 + L2 LINE L2 2925 3242 -30 2082 148 14 6 chr2 14715905 14716256 -235971598 - Tigger1 DNA MER2_type 0 2418 2065 * 5172 129 22 4 chr2 14716237 14717066 -235970788 - Tigger1 DNA MER2_type -1571 847 4 337 283 128 41 chr2 14717728 14717947 -235969907 + MLT1J LTR MaLR 102 339 -172 251 313 0 20 chr2 14719041 14719140 -235968714 + GA-rich Low_complexity Low_complexity 4 100 0 999 296 152 17 chr2 14719995 14720790 -235967064 + L2 LINE L2 2402 3313 0 24 32 0 0 chr2 14721854 14721885 -235965969 + AT_rich Low_complexity Low_complexity 1 31 0 2266 234 16 45 chr2 14722478 14723123 -235964731 + MLT1E2 LTR MaLR 1 626 0 21 107 0 0 chr2 14723337 14723421 -235964433 + AT_rich Low_complexity Low_complexity 1 84 0 293 327 201 28 chr2 14724044 14724298 -235963556 - L2 LINE L2 -452 2862 2565 406 266 85 40 chr2 14724707 14724884 -235962970 - MIR SINE MIR -1 261 77 2419 74 3 0 chr2 14724912 14725209 -235962645 - AluY SINE Alu -8 303 6 349 327 31 19 chr2 14725320 14725479 -235962375 - L1ME4a LINE L1 0 6121 5961 840 215 54 0 chr2 14725549 14725754 -235962100 - L1ME3A LINE L1 -85 6085 5870 709 158 0 24 chr2 14725798 14725925 -235961929 + FLAM_C SINE Alu 18 141 -2 1558 244 78 10 chr2 14725934 14726619 -235961235 - L1ME3A LINE L1 -355 5815 5086 1047 179 28 32 chr2 14726620 14726838 -235961016 + AluJo SINE Alu 85 301 -11 222 301 68 29 chr2 14726968 14727071 -235960783 + L2 LINE L2 3146 3252 -61 2003 131 7 0 chr2 14727178 14727469 -235960385 + AluSg SINE Alu 1 293 -17 746 195 0 0 chr2 14727724 14727852 -235960002 + AluJo SINE Alu 7 134 -178 33 56 0 0 chr2 14727854 14727908 -235959946 + AT_rich Low_complexity Low_complexity 1 54 0 650 200 131 0 chr2 14727908 14728017 -235959837 + AluJo SINE Alu 144 278 -34 1222 88 0 6 chr2 14728017 14728188 -235959666 + L1PB1 LINE L1 5980 6149 -2 650 200 131 0 chr2 14728188 14728223 -235959631 + AluJo SINE Alu 278 307 -5 405 39 0 0 chr2 14729387 14729438 -235958416 + (CA)n Simple_repeat Simple_repeat 2 52 0 1783 163 0 17 chr2 14729454 14729748 -235958106 + AluJo SINE Alu 1 289 -23 253 378 51 10 chr2 14729980 14730078 -235957776 - L2 LINE L2 -30 3242 3141 2451 267 88 77 chr2 14730218 14731708 -235956146 - L2 LINE L2 0 3313 1812 1844 176 0 14 chr2 14731830 14732166 -235955688 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 14732319 14732344 -235955510 + AT_rich Low_complexity Low_complexity 1 25 0 281 262 58 58 chr2 14732901 14733010 -235954844 + L1ME4a LINE L1 5672 5780 -341 247 75 0 38 chr2 14733010 14733063 -235954791 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 281 262 58 58 chr2 14733063 14733228 -235954626 + L1ME4a LINE L1 5779 5946 -175 32 43 0 0 chr2 14733401 14733447 -235954407 + AT_rich Low_complexity Low_complexity 1 46 0 228 224 17 0 chr2 14734331 14734389 -235953465 - L1ME3A LINE L1 -1158 4988 4930 921 196 41 78 chr2 14734452 14734955 -235952899 + L1M4 LINE L1 5009 5482 -696 13247 107 10 4 chr2 14734978 14737859 -235949995 + L1PA8A LINE L1 3230 6122 -9 1281 203 47 17 chr2 14737863 14738159 -235949695 + L1M4 LINE L1 5474 5778 -406 250 222 0 0 chr2 14740309 14740363 -235947491 + MER3 DNA MER1_type 37 90 -119 * 436 125 0 0 chr2 14740326 14740398 -235947456 - MER3 DNA MER1_type -6 203 132 837 159 30 0 chr2 14740398 14740530 -235947324 + AluSq/x SINE Alu 1 136 -177 644 247 7 27 chr2 14740530 14740680 -235947174 - MER3 DNA MER1_type -62 147 1 25 0 0 0 chr2 14740816 14740841 -235947013 + AT_rich Low_complexity Low_complexity 1 25 0 1156 276 73 83 chr2 14741405 14742121 -235945733 + L1ME3A LINE L1 5301 6008 -162 1922 135 14 3 chr2 14742121 14742410 -235945444 + AluSx SINE Alu 1 292 -20 1156 276 73 83 chr2 14742410 14742557 -235945297 + L1ME3A LINE L1 6008 6155 -15 306 0 0 0 chr2 14742597 14742631 -235945223 + (CA)n Simple_repeat Simple_repeat 1 34 0 3688 176 20 16 chr2 14743038 14743744 -235944110 - MER50 LTR ERV1 -23 711 3 206 234 21 0 chr2 14744847 14744894 -235942960 + MIR SINE MIR 144 191 -71 1655 196 31 54 chr2 14745609 14746001 -235941853 - MER31-int LTR ERV1 -1965 5572 5190 1189 190 48 48 chr2 14745989 14746152 -235941702 - MER31-int LTR ERV1 -1885 3051 2889 * 864 178 70 19 chr2 14746152 14746309 -235941545 - FRAM SINE Alu 0 166 2 1189 190 48 48 chr2 14746309 14746476 -235941378 - MER31-int LTR ERV1 -2046 2890 2721 1663 164 86 17 chr2 14746477 14746769 -235941085 + AluJb SINE Alu 1 312 0 651 243 30 78 chr2 14746783 14746816 -235941038 - MER31-int LTR ERV1 -2205 2731 2698 2066 159 86 21 chr2 14746816 14747188 -235940666 - MSTD LTR MaLR 0 396 1 651 243 30 78 chr2 14747188 14747422 -235940432 - MER31-int LTR ERV1 -2238 2698 2477 762 233 14 33 chr2 14747428 14747638 -235940216 - MER31-int LTR ERV1 -2561 2562 2357 361 378 46 26 chr2 14747694 14747996 -235939858 + L2 LINE L2 2919 3226 -46 2436 77 6 6 chr2 14748615 14748927 -235938927 - AluSp SINE Alu -1 312 1 372 341 24 6 chr2 14749024 14749188 -235938666 - L3 LINE CR1 -179 1398 1232 833 283 60 0 chr2 14749922 14750155 -235937699 - MIR SINE MIR -3 259 13 296 323 81 10 chr2 14750165 14750264 -235937590 + L2 LINE L2 3202 3307 -6 784 214 52 6 chr2 14750347 14750520 -235937334 - MER5A DNA MER1_type -2 187 7 351 78 0 0 chr2 14750804 14750855 -235936999 + (CA)n Simple_repeat Simple_repeat 2 52 0 224 222 67 4 chr2 14751484 14751549 -235936305 - MIR SINE MIR -135 73 4 254 288 68 34 chr2 14751653 14751771 -235936083 + L2 LINE L2 3185 3306 -7 3275 77 70 0 chr2 14752128 14752170 -235935684 - MLT2A1 LTR ERVL 0 444 406 253 61 20 20 chr2 14752170 14752219 -235935635 + (TA)n Simple_repeat Simple_repeat 2 50 0 3275 77 70 0 chr2 14752219 14752591 -235935263 - MLT2A1 LTR ERVL -38 406 1 184 240 147 0 chr2 14752626 14752701 -235935153 + L3 LINE CR1 1253 1338 -239 336 284 119 45 chr2 14752868 14753044 -235934810 + MIR SINE MIR 8 196 -66 216 0 0 0 chr2 14754534 14754558 -235933296 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 259 279 50 83 chr2 14754726 14754928 -235932926 + MIR SINE MIR 23 217 -45 268 243 9 9 chr2 14755016 14755123 -235932731 + GA-rich Low_complexity Low_complexity 2 108 0 292 312 117 32 chr2 14755651 14755805 -235932049 - MIR SINE MIR -48 214 48 1821 245 85 35 chr2 14755832 14756374 -235931480 - MLT1G1 LTR MaLR -25 570 2 278 50 25 0 chr2 14756704 14756744 -235931110 + (CA)n Simple_repeat Simple_repeat 1 41 0 952 145 50 13 chr2 14758302 14758461 -235929393 + FRAM SINE Alu 1 162 -14 1450 196 68 27 chr2 14758992 14759201 -235928653 - MLT1A1 LTR MaLR -14 351 121 2063 123 63 36 chr2 14759201 14759566 -235928288 - THE1C LTR MaLR 0 375 1 1450 196 68 27 chr2 14759566 14759693 -235928161 - MLT1A1 LTR MaLR -244 121 1 917 239 43 10 chr2 14759694 14759903 -235927951 + MER58A DNA MER1_type 1 216 -8 1524 81 72 32 chr2 14760250 14760471 -235927383 - MER30 DNA MER1_type 0 230 1 216 67 0 0 chr2 14761756 14761786 -235926068 + (GA)n Simple_repeat Simple_repeat 1 30 0 1566 208 14 20 chr2 14761786 14762142 -235925712 - MLT1A1 LTR MaLR -1 364 11 294 29 0 0 chr2 14762151 14762186 -235925668 + (GA)n Simple_repeat Simple_repeat 2 36 0 299 286 65 129 chr2 14762710 14763122 -235924732 + L2 LINE L2 2866 3251 -21 4216 121 35 33 chr2 14763478 14764170 -235923684 - L1MC1 LINE L1 -5 6328 5636 2134 168 94 8 chr2 14764173 14764567 -235923287 + MSTA LTR MaLR 1 428 0 379 0 0 0 chr2 14764596 14764640 -235923214 + L1PA3 LINE L1 6109 6152 -3 265 300 11 11 chr2 14764757 14764847 -235923007 - MIR SINE MIR -125 137 48 29 0 0 0 chr2 14765027 14765056 -235922798 + AT_rich Low_complexity Low_complexity 1 29 0 283 219 207 0 chr2 14765301 14765383 -235922471 - Charlie7 DNA MER1_type -2513 99 1 216 325 151 0 chr2 14765557 14765723 -235922131 + MIR SINE MIR 2 192 -70 1626 199 93 30 chr2 14765891 14766311 -235921543 + L1MB5 LINE L1 5711 6159 -15 1166 213 106 10 chr2 14767815 14768116 -235919738 - MER46C DNA MER2_type -8 330 1 694 212 179 0 chr2 14769040 14769191 -235918663 - MER45A DNA AcHobo 0 178 1 478 332 62 5 chr2 14769257 14769465 -235918389 + MIR SINE MIR 36 255 -7 771 214 33 33 chr2 14769617 14769832 -235918022 + LTR16C LTR ERVL 190 404 -87 2561 175 19 9 chr2 14769838 14770260 -235917594 - MSTB LTR MaLR 0 426 1 7054 195 41 33 chr2 14770260 14770656 -235917198 - MLT1A1-int LTR MaLR 0 1651 1260 2735 161 26 0 chr2 14770656 14771073 -235916781 + MSTA LTR MaLR 1 428 0 7054 195 41 33 chr2 14771073 14772375 -235915479 - MLT1A1-int LTR MaLR -391 1260 4 2461 120 35 107 chr2 14772379 14772838 -235915016 - MSTB LTR MaLR 0 426 1 231 167 0 0 chr2 14772848 14772890 -235914964 + LTR16C LTR ERVL 449 490 -1 2248 120 31 111 chr2 14773639 14774089 -235913765 + MSTB LTR MaLR 1 414 -12 1867 209 10 33 chr2 14774229 14774716 -235913138 - Charlie4a DNA MER1_type -7 501 26 263 331 40 54 chr2 14775632 14775780 -235912074 + MIR SINE MIR 42 187 -75 442 273 84 21 chr2 14775848 14775991 -235911863 + MIR SINE MIR 92 243 -19 2121 83 9 94 chr2 14776600 14776939 -235910915 + AluSq SINE Alu 1 310 -3 923 233 125 66 chr2 14777321 14777849 -235910005 - MLT1H1 LTR MaLR -4 622 2 360 281 34 20 chr2 14778541 14778687 -235909167 - MER103 DNA DNA -3 163 16 1263 189 120 49 chr2 14779611 14779805 -235908049 + MLT1B LTR MaLR 1 180 -210 216 0 0 0 chr2 14779805 14779829 -235908025 + (TC)n Simple_repeat Simple_repeat 2 25 0 1263 189 120 49 chr2 14779829 14779983 -235907871 + MLT1B LTR MaLR 180 374 -16 1405 205 7 40 chr2 14780431 14780728 -235907126 + AluJo SINE Alu 5 291 -21 21 0 0 0 chr2 14780729 14780750 -235907104 + AT_rich Low_complexity Low_complexity 1 21 0 285 165 10 136 chr2 14781286 14781389 -235906465 - HAL1 LINE L1 -112 2395 2306 228 279 58 53 chr2 14781399 14781589 -235906265 - L1ME3A LINE L1 -11 6159 5969 1448 232 161 76 chr2 14781607 14781689 -235906165 - L1MC5 LINE L1 -368 7593 7519 2274 167 21 5 chr2 14781689 14782072 -235905782 + MLT1B LTR MaLR 1 389 -1 1448 232 161 76 chr2 14782072 14782876 -235904978 - L1MC5 LINE L1 -442 7519 6582 378 0 0 0 chr2 14782876 14782918 -235904936 + (CA)n Simple_repeat Simple_repeat 2 43 0 1448 232 161 76 chr2 14782918 14783035 -235904819 - L1MC5 LINE L1 -1379 6582 6476 265 299 127 28 chr2 14783190 14783474 -235904380 - HAL1b LINE L1 -511 837 526 302 330 27 66 chr2 14783641 14783899 -235903955 - HAL1b LINE L1 -1046 302 55 263 187 44 0 chr2 14784279 14784370 -235903484 + (TATAA)n Simple_repeat Simple_repeat 3 97 0 328 278 68 12 chr2 14785015 14785177 -235902677 - HAL1 LINE L1 -164 2343 2173 684 255 132 38 chr2 14785337 14785678 -235902176 - HAL1 LINE L1 -1606 901 529 304 325 181 48 chr2 14785966 14786280 -235901574 - HAL1 LINE L1 -2135 372 17 1812 168 20 20 chr2 14786378 14786735 -235901119 + MLT1A1 LTR MaLR 4 360 -5 413 324 111 5 chr2 14787785 14787992 -235899862 + MIR SINE MIR 2 230 -32 2379 213 44 21 chr2 14787992 14788560 -235899294 + L1ME1 LINE L1 5581 6161 -5 249 128 0 0 chr2 14788586 14788625 -235899229 + MIR SINE MIR 218 256 -6 1397 200 23 58 chr2 14788789 14789134 -235898720 - MLT1B LTR MaLR 0 390 58 1118 298 45 13 chr2 14789157 14789539 -235898315 + LTR16C LTR ERVL 98 491 0 183 371 21 10 chr2 14789622 14789719 -235898135 - L2 LINE L2 -190 3082 2985 339 113 0 0 chr2 14789753 14789815 -235898039 + (GA)n Simple_repeat Simple_repeat 1 62 0 386 259 75 20 chr2 14790612 14790759 -235897095 + L3 LINE CR1 610 764 -813 3876 64 0 4 chr2 14790831 14791287 -235896567 - L1PA7 LINE L1 -13 6141 5688 3070 67 12 7 chr2 14791290 14791694 -235896160 + L1PA7 LINE L1 5254 5659 -495 302 283 81 0 chr2 14791769 14791868 -235895986 + L2 LINE L2 3202 3308 -5 2539 132 22 0 chr2 14791888 14792244 -235895610 - THE1B LTR MaLR 0 364 1 275 319 121 0 chr2 14792585 14792701 -235895153 - L2 LINE L2 -1 3271 3142 183 246 53 18 chr2 14792746 14792803 -235895051 + L2 LINE L2 3255 3313 0 279 206 83 33 chr2 14792826 14792921 -235894933 - MER5A DNA MER1_type -59 119 30 639 117 0 0 chr2 14793158 14793261 -235894593 + (TTCC)n Simple_repeat Simple_repeat 4 106 0 182 163 265 0 chr2 14793754 14793803 -235894051 + L2 LINE L2 3248 3309 -4 22 56 0 0 chr2 14794687 14794723 -235893131 + AT_rich Low_complexity Low_complexity 1 36 0 3963 220 117 31 chr2 14794779 14796055 -235891799 - Charlie7 DNA MER1_type -79 2533 1148 257 302 73 0 chr2 14796078 14796174 -235891680 - MER91C DNA MER1_type -23 117 15 606 251 40 60 chr2 14796181 14796432 -235891422 - Charlie7 DNA MER1_type -1462 1150 905 378 287 66 12 chr2 14796532 14796699 -235891155 - Charlie7 DNA MER1_type -2371 241 66 238 290 65 9 chr2 14796805 14796912 -235890942 - L1ME4a LINE L1 -6 6115 6003 1887 122 33 0 chr2 14796943 14797214 -235890640 - AluSg SINE Alu -30 280 1 264 167 0 0 chr2 14797235 14797283 -235890571 + (TG)n Simple_repeat Simple_repeat 1 48 0 966 264 5 0 chr2 14797312 14797505 -235890349 - MER58A DNA MER1_type -29 195 2 430 102 88 0 chr2 14797508 14797655 -235890199 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 403 57 119 16 chr2 14797663 14797967 -235889887 + (TA)n Simple_repeat Simple_repeat 1 335 0 * 695 85 45 28 chr2 14797944 14798120 -235889734 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 653 75 58 23 chr2 14798148 14798321 -235889533 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 251 182 227 0 chr2 14798339 14798405 -235889449 - MIR SINE MIR 0 262 182 1415 188 26 32 chr2 14798447 14798796 -235889058 + MLT1A1 LTR MaLR 20 428 0 497 223 120 65 chr2 14799018 14799202 -235888652 + LTR16C LTR ERVL 147 340 -151 2249 135 33 33 chr2 14800652 14801016 -235886838 + THE1B LTR MaLR 1 364 0 752 236 140 14 chr2 14802443 14802735 -235885119 - L1ME4a LINE L1 -252 5869 5541 2220 120 0 0 chr2 14802806 14803105 -235884749 - AluSx SINE Alu -13 299 1 1246 181 33 8 chr2 14804171 14804406 -235883448 - Tigger2a DNA MER2_type -2274 434 191 2205 132 0 0 chr2 14804406 14804717 -235883137 + AluSx SINE Alu 1 311 -1 1182 142 0 21 chr2 14804755 14804945 -235882909 - Tigger2a DNA MER2_type -225 209 24 473 217 151 60 chr2 14806158 14806191 -235881663 + Charlie8 DNA MER1_type 45 74 -256 2451 85 0 3 chr2 14806191 14806496 -235881358 + AluSg SINE Alu 1 304 -6 473 217 151 60 chr2 14806496 14806628 -235881226 + Charlie8 DNA MER1_type 74 225 -105 448 262 95 48 chr2 14806699 14806867 -235880987 + MIR3 SINE MIR 26 201 -7 820 165 8 0 chr2 14806958 14807091 -235880763 + AluJo SINE Alu 1 134 -178 196 343 205 24 chr2 14807387 14807553 -235880301 + MIR3 SINE MIR 13 208 0 197 297 16 31 chr2 14808352 14808416 -235879438 + L2 LINE L2 3210 3272 0 1230 243 101 42 chr2 14808943 14808981 -235878873 - MLT2B1 LTR ERVL 0 520 486 309 26 0 0 chr2 14808981 14809019 -235878835 + (TG)n Simple_repeat Simple_repeat 2 39 0 1230 243 101 42 chr2 14809019 14809436 -235878418 - MLT2B1 LTR ERVL -34 486 38 335 62 21 0 chr2 14809436 14809484 -235878370 - MER52C LTR ERV1 0 1278 1230 4712 200 93 15 chr2 14809489 14810647 -235877207 - MER52A LTR ERV1 -243 1512 202 319 190 0 0 chr2 14811244 14811302 -235876552 - MER52A LTR ERV1 -1697 58 1 243 191 0 0 chr2 14811302 14811342 -235876512 - MLT2B1 LTR ERVL -373 41 2 1859 124 9 53 chr2 14811876 14812198 -235875656 + AluJb SINE Alu 1 308 -4 396 320 48 52 chr2 14812199 14812430 -235875424 - MIR SINE MIR -12 250 21 377 335 72 0 chr2 14813321 14813488 -235874366 + MIR SINE MIR 48 226 -36 400 308 0 0 chr2 14813852 14813956 -235873898 + L2 LINE L2 3210 3313 0 596 288 68 27 chr2 14814134 14814353 -235873501 - MIR SINE MIR -2 260 33 1827 264 62 14 chr2 14815240 14815759 -235872095 + MLT1H1 LTR MaLR 12 555 0 297 360 22 11 chr2 14816846 14817024 -235870830 - MIR SINE MIR -64 198 19 285 207 74 58 chr2 14817402 14817523 -235870331 + L1ME4a LINE L1 5967 6089 -32 248 333 86 8 chr2 14817937 14818054 -235869800 + L2 LINE L2 2654 2779 -535 197 341 29 58 chr2 14818081 14818254 -235869600 + L2 LINE L2 2881 3048 -224 2449 100 0 0 chr2 14818257 14818566 -235869288 + AluSg SINE Alu 1 309 -1 368 303 49 21 chr2 14818680 14818822 -235869032 + L2 LINE L2 3122 3267 -5 2093 114 94 28 chr2 14818856 14819208 -235868646 + THE1C LTR MaLR 1 375 0 255 61 0 0 chr2 14820445 14820478 -235867376 + (TG)n Simple_repeat Simple_repeat 2 34 0 564 274 169 37 chr2 14820527 14820958 -235866896 - LTR33 LTR ERVL -8 513 26 385 281 118 58 chr2 14820981 14821395 -235866459 - L1MD2 LINE L1 -324 5845 5365 213 216 11 34 chr2 14821581 14821669 -235866185 + (TTATA)n Simple_repeat Simple_repeat 2 87 0 726 141 0 0 chr2 14821786 14821914 -235865940 + (TTCC)n Simple_repeat Simple_repeat 1 128 0 292 308 91 35 chr2 14821921 14822207 -235865647 - L1MD2 LINE L1 -1134 5012 4711 266 260 47 53 chr2 14822377 14822546 -235865308 + L1ME3A LINE L1 5757 5927 -242 2315 102 10 0 chr2 14822735 14823038 -235864816 - AluSq SINE Alu -3 310 5 1615 164 26 10 chr2 14823088 14823392 -235864462 - AluJb SINE Alu -3 309 1 321 284 95 35 chr2 14823708 14824211 -235863643 + L1ME LINE L1 5127 5669 -452 693 223 129 45 chr2 14824548 14824597 -235863257 - MER20 DNA MER1_type 0 219 176 2277 97 0 0 chr2 14824597 14824895 -235862959 - AluSg SINE Alu -12 298 1 693 223 129 45 chr2 14824895 14825047 -235862807 - MER20 DNA MER1_type -43 176 1 407 224 17 43 chr2 14825096 14825212 -235862642 - MLT1G1 LTR MaLR -482 113 1 396 269 21 0 chr2 14825212 14825305 -235862549 + MIR3 SINE MIR 62 156 -52 2572 154 46 2 chr2 14827033 14827443 -235860411 + MSTC LTR MaLR 1 428 0 205 200 0 22 chr2 14827568 14827613 -235860241 + (CTA)n Simple_repeat Simple_repeat 3 46 0 319 277 40 79 chr2 14827960 14828137 -235859717 - MIR SINE MIR -65 197 28 2123 141 35 3 chr2 14828394 14828734 -235859120 - L1MB1 LINE L1 0 6168 5818 813 131 0 0 chr2 14828739 14828869 -235858985 + (TCTCC)n Simple_repeat Simple_repeat 2 131 0 1663 182 0 67 chr2 14828869 14829198 -235858656 - AluJb SINE Alu -5 307 1 9034 165 37 81 chr2 14829198 14831443 -235856411 - L1MB1 LINE L1 -481 5831 3752 219 69 0 0 chr2 14831443 14831472 -235856382 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9034 165 37 81 chr2 14831472 14832105 -235855749 - L1MB1 LINE L1 -2560 3752 3093 316 260 89 41 chr2 14832103 14832226 -235855628 + L1 LINE L1 2536 2664 -3482 * 1997 153 15 73 chr2 14832314 14832726 -235855128 - MLT1B LTR MaLR 0 390 3 238 322 0 0 chr2 14833033 14833092 -235854762 - L2 LINE L2 -13 3259 3201 230 317 60 30 chr2 14834779 14834962 -235852892 - MIR SINE MIR -6 256 20 446 280 14 21 chr2 14835421 14835564 -235852290 - MIR SINE MIR -65 197 56 320 336 53 0 chr2 14836090 14836203 -235851651 - MIR SINE MIR -112 150 32 294 50 0 0 chr2 14836251 14836291 -235851563 + (T)n Simple_repeat Simple_repeat 1 40 0 375 276 372 0 chr2 14836379 14836578 -235851276 - L3 LINE CR1 -182 1395 1123 222 254 15 45 chr2 14836904 14836971 -235850883 - L2 LINE L2 -5 3267 3203 1301 141 13 53 chr2 14837830 14838057 -235849797 - MER20 DNA MER1_type -1 218 1 1832 105 0 8 chr2 14838095 14838352 -235849502 - L1PB1 LINE L1 -459 5692 5438 3093 124 22 0 chr2 14838352 14838795 -235849059 + L1PB1 LINE L1 5675 6143 -8 2291 97 6 3 chr2 14839109 14839420 -235848434 + AluSx SINE Alu 1 312 0 875 281 62 11 chr2 14839834 14840161 -235847693 - L1MC4 LINE L1 -100 7708 7472 472 260 60 13 chr2 14840369 14840519 -235847335 - L1MC4 LINE L1 -1422 6620 6464 227 271 96 66 chr2 14840931 14841097 -235846757 + L2 LINE L2 1933 2103 -1211 410 246 79 8 chr2 14841219 14841345 -235846509 + MER103 DNA DNA 31 165 -1 331 294 119 0 chr2 14841668 14841811 -235846043 + MIR SINE MIR 50 209 -53 187 300 43 0 chr2 14841839 14841909 -235845945 - MIR SINE MIR -103 105 33 466 296 64 10 chr2 14841915 14842119 -235845735 + MIR SINE MIR 36 251 -11 396 241 145 28 chr2 14842757 14842902 -235844952 - MIR3 SINE MIR -30 178 17 1666 209 67 34 chr2 14843015 14843609 -235844245 - Charlie2 DNA MER1_type -25 2837 2224 544 299 23 73 chr2 14843678 14843939 -235843915 - Charlie2 DNA MER1_type -2533 249 2 255 378 51 47 chr2 14844121 14844396 -235843458 - L2 LINE L2 -49 3223 2948 448 279 58 41 chr2 14844657 14844829 -235843025 - MIR SINE MIR -74 188 14 288 246 0 14 chr2 14845123 14845192 -235842662 - L2 LINE L2 0 3313 3246 264 271 136 12 chr2 14845362 14845535 -235842319 - MIR SINE MIR -68 140 2 693 223 80 27 chr2 14845703 14845891 -235841963 + MER46C DNA MER2_type 139 336 -2 308 189 14 0 chr2 14845913 14845987 -235841867 + GA-rich Low_complexity Low_complexity 1 75 0 337 336 9 9 chr2 14846144 14846254 -235841600 - MIR SINE MIR -69 139 30 216 309 114 60 chr2 14847175 14847473 -235840381 + L2 LINE L2 2954 3267 -5 269 254 18 55 chr2 14848113 14848223 -235839631 + L2 LINE L2 3201 3306 -7 659 252 73 23 chr2 14848244 14848462 -235839392 - MIR SINE MIR -12 250 22 24 0 0 0 chr2 14849615 14849639 -235838215 + AT_rich Low_complexity Low_complexity 1 24 0 332 237 154 19 chr2 14850001 14850157 -235837697 + L1MCc LINE L1 24 200 -6223 1798 178 22 3 chr2 14850346 14850666 -235837188 + L1M2 LINE L1 5474 5799 -513 228 266 242 23 chr2 14850948 14851076 -235836778 + L2 LINE L2 3096 3251 -21 508 225 0 39 chr2 14851922 14852051 -235835803 - L1M4 LINE L1 -1145 5001 4878 2121 105 0 3 chr2 14852069 14852375 -235835479 + AluSx SINE Alu 1 305 0 3504 199 20 18 chr2 14852377 14853142 -235834712 - L1MB8 LINE L1 -16 6162 5397 521 308 0 64 chr2 14853144 14853316 -235834538 + FRAM SINE Alu 1 161 -15 2955 273 96 18 chr2 14853352 14853510 -235834344 - L1MB8 LINE L1 -746 5400 5256 1765 205 54 25 chr2 14853510 14853915 -235833939 - LTR52 LTR ERVL -3 418 2 2955 273 96 18 chr2 14853915 14855120 -235832734 - L1MB8 LINE L1 -890 5256 3897 1120 208 39 17 chr2 14855120 14855351 -235832503 - MER8 DNA MER2_type 0 239 4 2955 273 96 18 chr2 14855351 14855468 -235832386 - L1MB8 LINE L1 -2249 3897 3791 1503 239 66 18 chr2 14855468 14855908 -235831946 - MLT1C LTR MaLR 0 467 7 3502 256 48 33 chr2 14855914 14857281 -235830573 - L1MB8 LINE L1 -2351 3795 2409 1940 216 108 21 chr2 14857277 14857860 -235829994 - L1MEc LINE L1 -5223 1173 540 * 1871 209 12 0 chr2 14857863 14858208 -235829646 - MER68 LTR ERV1 -42 520 172 359 167 0 0 chr2 14858213 14858279 -235829575 - Charlie2 DNA MER1_type -912 1950 1885 713 198 30 42 chr2 14858281 14858448 -235829406 - MER58B DNA MER1_type 0 341 177 2133 142 3 0 chr2 14858448 14858759 -235829095 - AluSx SINE Alu 0 312 1 512 303 75 31 chr2 14859062 14859356 -235828498 - Charlie2 DNA MER1_type -2547 315 9 1732 141 53 11 chr2 14859672 14859955 -235827899 + AluSx SINE Alu 1 295 -17 467 214 0 0 chr2 14859990 14860079 -235827775 + MIR SINE MIR 101 189 -73 1885 183 102 10 chr2 14860101 14860494 -235827360 - MSTB1 LTR MaLR 0 432 4 579 278 7 0 chr2 14861189 14861340 -235826514 + MIR SINE MIR 111 262 0 259 274 12 60 chr2 14861335 14861419 -235826435 - L2 LINE L2 -2 3270 3191 * 192 304 38 121 chr2 14861904 14862193 -235825661 - L2 LINE L2 -202 3070 2806 344 285 16 32 chr2 14862547 14862670 -235825184 - MIR SINE MIR -63 145 25 436 295 115 16 chr2 14863360 14863543 -235824311 - MIR3 SINE MIR -5 203 3 264 340 10 10 chr2 14863773 14863873 -235823981 + MIR SINE MIR 32 131 -131 288 0 0 0 chr2 14864435 14864467 -235823387 + (CA)n Simple_repeat Simple_repeat 2 33 0 1355 174 24 96 chr2 14864551 14864884 -235822970 - MLT1B LTR MaLR -76 314 6 2671 112 11 11 chr2 14864884 14865259 -235822595 + THE1C LTR MaLR 1 375 0 9918 127 38 44 chr2 14865259 14866848 -235821006 + THE1C-int LTR MaLR 1 1580 0 2671 111 16 8 chr2 14866851 14867220 -235820634 + THE1C LTR MaLR 4 375 0 234 327 118 68 chr2 14868581 14868979 -235818875 + L2 LINE L2 2854 3271 -1 304 326 51 7 chr2 14869956 14870094 -235817760 + MIR SINE MIR 119 262 0 782 186 45 0 chr2 14871189 14871366 -235816488 - L1MA4 LINE L1 -3 6479 6295 2490 127 0 3 chr2 14871366 14871710 -235816144 + L1PB1 LINE L1 5789 6134 -17 2505 152 2 73 chr2 14871722 14872214 -235815640 - L1MA4 LINE L1 -178 6304 5848 * 8647 219 45 57 chr2 14872210 14875328 -235812526 - L1MA4 LINE L1 -743 5585 2544 6435 188 41 20 chr2 14875301 14875668 -235812186 - L1MA4 LINE L1 -4073 1255 897 * 1989 130 32 0 chr2 14875668 14875945 -235811909 - AluSx SINE Alu -26 286 1 6435 188 41 20 chr2 14875945 14877171 -235810683 - L1MA4 LINE L1 -4431 897 1 300 316 96 0 chr2 14877211 14877395 -235810459 + MIR SINE MIR 32 237 -25 2565 39 0 16 chr2 14877411 14877723 -235810131 - AluY SINE Alu -3 308 2 21 0 0 0 chr2 14877942 14877963 -235809891 + AT_rich Low_complexity Low_complexity 1 21 0 332 330 85 0 chr2 14878004 14878110 -235809744 + MIR SINE MIR 33 147 -61 2876 141 26 5 chr2 14879097 14879516 -235808338 - MSTA LTR MaLR 0 428 1 311 300 40 0 chr2 14879592 14879692 -235808162 + MIR3 SINE MIR 65 168 -40 280 269 21 32 chr2 14880664 14880757 -235807097 + L2 LINE L2 3192 3283 -30 497 329 79 22 chr2 14880956 14881233 -235806621 + L3 LINE CR1 1065 1357 -220 1214 148 124 5 chr2 14881245 14881462 -235806392 - MSTA LTR MaLR -50 378 136 226 290 43 0 chr2 14882245 14882314 -235805540 + MIR SINE MIR 23 94 -168 218 349 125 20 chr2 14883246 14883398 -235804456 + MIR SINE MIR 25 192 -70 367 235 160 45 chr2 14883521 14883592 -235804262 - MIR SINE MIR 0 262 201 2154 110 10 7 chr2 14883592 14883893 -235803961 - AluSg SINE Alu -8 302 1 367 235 160 45 chr2 14883893 14883982 -235803872 - MIR SINE MIR -61 201 124 2539 186 36 36 chr2 14883982 14884454 -235803400 + MER70A LTR ERVL 1 472 0 367 235 160 45 chr2 14884454 14884492 -235803362 - MIR SINE MIR -138 124 40 702 306 56 48 chr2 14886344 14887109 -235800745 + HAL1 LINE L1 998 1768 -739 382 288 38 76 chr2 14887281 14887465 -235800389 + HAL1b LINE L1 754 930 -418 519 315 25 49 chr2 14888501 14888704 -235799150 + MIR3 SINE MIR 6 203 -5 184 344 56 0 chr2 14889126 14889216 -235798638 + MIR3 SINE MIR 69 163 -45 * 238 230 194 71 chr2 14889198 14889326 -235798528 + MIR SINE MIR 17 158 -60 2002 153 172 3 chr2 14891652 14892018 -235795836 - MSTA LTR MaLR 0 428 1 2221 96 3 0 chr2 14892155 14892458 -235795396 + AluSx SINE Alu 1 304 0 226 345 86 7 chr2 14892577 14892716 -235795138 + MER5A DNA MER1_type 1 150 -39 4409 168 37 41 chr2 14893905 14894524 -235793330 + L1MB3 LINE L1 5276 5893 -290 1935 169 11 101 chr2 14894524 14894979 -235792875 - MLT2D LTR ERVL 0 414 1 4409 168 37 41 chr2 14894979 14895268 -235792586 + L1MB3 LINE L1 5893 6181 -2 251 284 257 0 chr2 14895623 14895771 -235792083 + MER5A DNA MER1_type 4 189 0 262 236 47 66 chr2 14896123 14896229 -235791625 - MIR SINE MIR -64 198 95 283 296 61 10 chr2 14896831 14896929 -235790925 - L2 LINE L2 0 3272 3170 223 273 0 0 chr2 14897080 14897124 -235790730 - MIR SINE MIR -127 81 38 747 226 38 85 chr2 14897788 14898023 -235789831 + MER58A DNA MER1_type 1 224 0 189 147 0 0 chr2 14898989 14899023 -235788831 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 321 253 152 10 chr2 14900524 14900623 -235787231 + MIR SINE MIR 81 193 -69 418 317 21 7 chr2 14901640 14901782 -235786072 - MIR SINE MIR -70 192 49 2369 230 69 84 chr2 14901929 14902447 -235785407 + MER69B DNA AcHobo 100 603 -1923 1935 144 7 7 chr2 14902447 14902752 -235785102 + AluSg SINE Alu 1 305 -5 2369 230 69 84 chr2 14902752 14903056 -235784798 + MER69B DNA AcHobo 603 910 -316 1143 271 76 87 chr2 14904548 14905264 -235782590 + L1ME3A LINE L1 5301 6008 -162 1922 135 14 3 chr2 14905264 14905553 -235782301 + AluSx SINE Alu 1 292 -20 1143 271 76 87 chr2 14905553 14905700 -235782154 + L1ME3A LINE L1 6008 6155 -15 306 0 0 0 chr2 14905740 14905774 -235782080 + (CA)n Simple_repeat Simple_repeat 1 34 0 3688 176 20 16 chr2 14906181 14906887 -235780967 - MER50 LTR ERV1 -23 711 3 206 234 21 0 chr2 14907991 14908038 -235779816 + MIR SINE MIR 144 191 -71 2228 190 69 9 chr2 14908555 14908992 -235778862 + MER31B LTR ERV1 4 466 0 234 0 0 0 chr2 14909190 14909216 -235778638 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2480 148 59 5 chr2 14909381 14909787 -235778067 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 14909839 14909860 -235777994 + AT_rich Low_complexity Low_complexity 1 21 0 974 192 36 60 chr2 14910757 14911059 -235776795 + MER31A LTR ERV1 1 295 -190 854 159 62 11 chr2 14911144 14911320 -235776534 + MER93b LTR ERV1 189 373 0 413 109 0 0 chr2 14911320 14911375 -235776479 + MER31A LTR ERV1 360 414 -71 542 112 31 71 chr2 14911397 14911495 -235776359 - AluJb SINE Alu -179 133 40 2520 169 36 89 chr2 14911654 14912259 -235775595 + LTR35 LTR ERV1 1 573 -45 276 269 0 15 chr2 14912259 14912320 -235775534 + (TG)n Simple_repeat Simple_repeat 2 62 0 1581 214 0 0 chr2 14912320 14912614 -235775240 - AluJo SINE Alu -18 294 1 28 71 0 0 chr2 14913427 14913483 -235774371 + AT_rich Low_complexity Low_complexity 1 56 0 228 283 151 28 chr2 14913595 14913701 -235774153 + L2 LINE L2 3175 3293 -20 3058 137 28 8 chr2 14913704 14914200 -235773654 - Tigger3(Golem) DNA MER2_type -1 3028 2523 560 192 0 92 chr2 14914223 14914343 -235773511 - FRAM SINE Alu -31 145 37 212 314 57 0 chr2 14914443 14914513 -235773341 + L2 LINE L2 3145 3218 -54 6381 40 7 56 chr2 14914975 14915896 -235771958 + SVA Other Other 534 1386 0 790 285 71 38 chr2 14916451 14916687 -235771167 + L2 LINE L2 2910 3164 -149 2110 142 11 62 chr2 14916687 14917061 -235770793 - THE1A LTR MaLR 0 355 1 790 285 71 38 chr2 14917061 14917192 -235770662 + L2 LINE L2 3164 3289 -24 257 299 159 28 chr2 14917249 14917356 -235770498 + MIR SINE MIR 24 144 -64 324 188 0 0 chr2 14917585 14917654 -235770200 + GA-rich Low_complexity Low_complexity 2 70 0 332 290 114 19 chr2 14917696 14917958 -235769896 + L1M4c LINE L1 1309 1595 -4789 1938 140 3 10 chr2 14917958 14918251 -235769603 + AluSg SINE Alu 1 291 -19 1282 254 109 31 chr2 14918266 14919109 -235768745 + L1M4c LINE L1 2893 3971 -2411 2150 117 3 0 chr2 14919674 14919973 -235767881 + AluSx SINE Alu 1 300 -12 329 333 15 15 chr2 14921445 14921577 -235766277 - L2 LINE L2 -23 3290 3159 2095 118 0 3 chr2 14921587 14921876 -235765978 + AluSx SINE Alu 1 288 -24 627 251 80 25 chr2 14922282 14922481 -235765373 - MIR SINE MIR 0 262 53 210 383 25 0 chr2 14922572 14922653 -235765201 - L2 LINE L2 -682 2632 2550 1640 174 11 7 chr2 14922674 14922999 -235764855 + AluJb SINE Alu 1 326 0 1918 134 6 35 chr2 14923098 14923412 -235764442 + AluJo SINE Alu 1 305 -7 271 234 13 0 chr2 14923569 14923646 -235764208 + MIR SINE MIR 183 260 -2 2263 123 0 0 chr2 14923803 14924112 -235763742 - AluSx SINE Alu -1 311 3 210 369 18 27 chr2 14924254 14924365 -235763489 + L2 LINE L2 3155 3264 -8 21 0 0 0 chr2 14924586 14924607 -235763247 + AT_rich Low_complexity Low_complexity 1 21 0 307 265 0 0 chr2 14925033 14925113 -235762741 - MER5A DNA MER1_type -49 140 50 22 35 0 0 chr2 14925284 14925313 -235762541 + AT_rich Low_complexity Low_complexity 1 29 0 396 303 158 13 chr2 14925315 14925549 -235762305 + L1ME4a LINE L1 5548 5815 -306 1281 162 4 40 chr2 14925550 14925778 -235762076 + Tigger2a DNA MER2_type 2 221 -213 2133 65 0 43 chr2 14926021 14926299 -235761555 - AluSc SINE Alu -12 297 32 21 57 0 0 chr2 14926771 14926806 -235761048 + AT_rich Low_complexity Low_complexity 1 35 0 948 175 0 0 chr2 14926911 14927135 -235760719 + CT-rich Low_complexity Low_complexity 1 224 0 279 291 45 37 chr2 14927658 14927792 -235760062 + L1MEd LINE L1 43 177 -5942 481 281 55 47 chr2 14927845 14928223 -235759631 + L1MEd LINE L1 269 784 -5335 1116 185 12 0 chr2 14928332 14928505 -235759349 + FAM SINE Alu 1 175 0 206 133 0 44 chr2 14929298 14929343 -235758511 + (CATA)n Simple_repeat Simple_repeat 2 44 0 225 263 102 8 chr2 14930580 14930698 -235757156 + L1ME4a LINE L1 5980 6108 -13 476 83 0 0 chr2 14931299 14931359 -235756495 - MER1B DNA MER1_type 0 339 280 * 1348 173 0 0 chr2 14931355 14931557 -235756297 - MER1B DNA MER1_type -95 202 1 261 182 0 0 chr2 14931641 14931696 -235756158 + (TA)n Simple_repeat Simple_repeat 1 55 0 1848 144 37 17 chr2 14932017 14932315 -235755539 + AluJo SINE Alu 4 307 -5 235 300 100 36 chr2 14932783 14932893 -235754961 - L2 LINE L2 -5 3267 3151 337 261 0 0 chr2 14933392 14933461 -235754393 + L2 LINE L2 3240 3308 -5 191 59 0 29 chr2 14933472 14933506 -235754348 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 314 289 149 25 chr2 14933702 14933823 -235754031 + L2 LINE L2 3108 3243 -29 206 283 57 104 chr2 14934696 14934802 -235753052 + MIR SINE MIR 59 159 -103 188 333 107 28 chr2 14934903 14935080 -235752774 - L2 LINE L2 -163 3109 2919 1282 165 95 126 chr2 14935107 14935519 -235752335 - MER83 LTR ERV1 0 448 50 593 186 0 26 chr2 14935518 14935631 -235752223 - MER83 LTR ERV1 -338 110 1 * 192 77 0 0 chr2 14935730 14935756 -235752098 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 1156 250 88 59 chr2 14935932 14936494 -235751360 + L2 LINE L2 2727 3311 -2 1440 191 89 0 chr2 14936994 14937276 -235750578 - AluJb SINE Alu -5 307 1 476 295 8 0 chr2 14937764 14937893 -235749961 + MER94 DNA DNA 5 134 0 455 265 105 108 chr2 14938167 14938473 -235749381 + MLT1K LTR MaLR 242 546 -42 1046 160 0 0 chr2 14938603 14938759 -235749095 - AluJ SINE Alu -23 289 134 218 314 265 0 chr2 14938925 14939027 -235748827 - MIR SINE MIR -114 148 20 810 141 0 63 chr2 14939305 14939447 -235748407 - AluJ SINE Alu -169 133 1 186 43 0 0 chr2 14939592 14939615 -235748239 + (CAT)n Simple_repeat Simple_repeat 1 23 0 186 247 52 78 chr2 14939671 14939748 -235748106 - MIR SINE MIR -125 137 63 2243 92 0 33 chr2 14940012 14940318 -235747536 + AluSx SINE Alu 1 296 -16 23 33 0 0 chr2 14940630 14940660 -235747194 + AT_rich Low_complexity Low_complexity 1 30 0 2353 87 0 3 chr2 14941019 14941318 -235746536 + AluSq SINE Alu 1 298 -15 227 301 68 8 chr2 14941467 14941600 -235746254 + L1MC4 LINE L1 7899 8039 -3 2383 71 0 3 chr2 14941886 14942182 -235745672 - AluY SINE Alu -16 295 1 1160 174 4 51 chr2 14942282 14942517 -235745337 + AluJo SINE Alu 85 308 -4 286 303 90 6 chr2 14942579 14942757 -235745097 - L1MEd LINE L1 -5015 1104 912 851 283 123 13 chr2 14942835 14942940 -235744914 - L1MEd LINE L1 -5290 829 737 306 0 0 0 chr2 14942940 14942974 -235744880 + (TG)n Simple_repeat Simple_repeat 2 35 0 851 283 123 13 chr2 14942974 14943250 -235744604 - L1MEd LINE L1 -5382 737 406 271 380 0 9 chr2 14944966 14945074 -235742780 + MIR SINE MIR 26 132 -130 460 169 36 0 chr2 14945119 14945185 -235742669 + MER67A LTR ERV1 15 83 -460 1771 211 118 47 chr2 14945185 14945776 -235742078 + MER67B LTR ERV1 1 633 -28 235 339 8 62 chr2 14945900 14946030 -235741824 + MER5A DNA MER1_type 15 137 -52 1993 143 3 13 chr2 14946053 14946360 -235741494 - AluSx SINE Alu -8 304 1 2157 220 10 44 chr2 14946627 14947146 -235740708 + LTR31 LTR ERV1 104 604 -15 3272 64 59 7 chr2 14947291 14947712 -235740142 - MLT2A1 LTR ERVL 0 444 2 267 186 0 51 chr2 14947743 14947802 -235740052 + MLT1H1 LTR MaLR 53 108 -447 1551 212 70 68 chr2 14948199 14948295 -235739559 + MER49 LTR ERV1 4 98 -825 2163 99 0 3 chr2 14948295 14948599 -235739255 + AluSx SINE Alu 1 303 0 1551 212 70 68 chr2 14948599 14949120 -235738734 + MER49 LTR ERV1 98 806 -117 1687 148 83 0 chr2 14949120 14949275 -235738579 - AluJb SINE Alu -12 300 159 221 0 0 33 chr2 14949275 14949305 -235738549 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1687 148 83 0 chr2 14949305 14949426 -235738428 - AluJb SINE Alu -153 159 1 1551 212 70 68 chr2 14949426 14949545 -235738309 + MER49 LTR ERV1 806 923 0 288 295 92 35 chr2 14949825 14949895 -235737959 + L2 LINE L2 1637 1702 -1612 1744 169 10 10 chr2 14949895 14950197 -235737657 + AluJo SINE Alu 1 302 -10 288 295 92 35 chr2 14950197 14950353 -235737501 + L2 LINE L2 1702 1876 -1438 408 268 197 0 chr2 14950544 14950686 -235737168 + MER5A DNA MER1_type 17 186 -3 267 328 151 65 chr2 14950686 14951267 -235736587 + L2 LINE L2 2126 2761 -553 795 183 30 71 chr2 14951267 14951464 -235736390 + MER5A DNA MER1_type 1 189 0 267 328 151 65 chr2 14951464 14951479 -235736375 + L2 LINE L2 2761 2773 -541 2082 207 131 20 chr2 14951601 14952089 -235735765 + MLT1F LTR MaLR 1 542 0 485 318 15 108 chr2 14952096 14952495 -235735359 + L2 LINE L2 2907 3268 -4 249 121 0 0 chr2 14952638 14952671 -235735183 + MLT1G1 LTR MaLR 1 33 -562 4520 139 20 20 chr2 14952671 14953402 -235734452 + ERVL-D LTR ERVL 4724 5454 -310 281 176 29 0 chr2 14953407 14953475 -235734379 + (TATG)n Simple_repeat Simple_repeat 3 72 0 896 147 0 15 chr2 14953523 14953659 -235734195 - AluJo SINE Alu -178 134 1 1778 128 30 23 chr2 14953659 14953964 -235733890 + ERVL-D LTR ERVL 5447 5753 -11 1946 159 18 95 chr2 14953968 14954039 -235733815 + MLT2D LTR ERVL 1 76 -338 2188 110 7 13 chr2 14954039 14954347 -235733507 + AluSq SINE Alu 1 306 -7 1946 159 18 95 chr2 14954347 14954401 -235733453 + MLT2D LTR ERVL 76 133 -281 1755 150 11 25 chr2 14954401 14954687 -235733167 + AluJb SINE Alu 11 292 -20 1946 159 18 95 chr2 14954687 14955001 -235732853 + MLT2D LTR ERVL 133 407 -7 1864 163 3 3 chr2 14955058 14955352 -235732502 + AluJo SINE Alu 3 296 -16 783 260 218 25 chr2 14955360 14955796 -235732058 + MLT1G3 LTR MaLR 1 595 0 2022 237 35 51 chr2 14956942 14957490 -235730364 + MLT1F LTR MaLR 1 539 -3 1648 264 57 22 chr2 14957497 14957952 -235729902 - MLT1J LTR MaLR -2 509 39 1118 261 89 44 chr2 14958087 14958615 -235729239 + MLT1H1 LTR MaLR 3 554 -1 200 361 59 30 chr2 14958617 14958786 -235729068 - L2 LINE L2 -295 2977 2804 1465 179 13 42 chr2 14959898 14960008 -235727846 - AluJb SINE Alu -14 298 186 1848 73 0 45 chr2 14960008 14960255 -235727599 + AluY SINE Alu 60 295 -16 1465 179 13 42 chr2 14960255 14960451 -235727403 - AluJb SINE Alu -126 186 1 1287 199 61 101 chr2 14960495 14960871 -235726983 + MLT1A1 LTR MaLR 1 361 -4 2318 80 0 3 chr2 14961205 14961491 -235726363 - AluSx SINE Alu -27 285 1 588 131 180 0 chr2 14961513 14961635 -235726219 - L1MB7 LINE L1 0 6184 6041 1830 153 14 4 chr2 14963002 14963283 -235724571 - AluJo SINE Alu -28 284 1 216 211 11 158 chr2 14963422 14963517 -235724337 + MER91C DNA MER1_type 30 110 -30 995 241 36 5 chr2 14963600 14963824 -235724030 - MIR SINE MIR -26 236 6 942 124 0 0 chr2 14963825 14963962 -235723892 - AluSg/x SINE Alu -9 303 167 2306 80 10 0 chr2 14963970 14964147 -235723707 - AluSg SINE Alu -5 305 122 279 0 0 0 chr2 14964147 14964178 -235723676 + (TG)n Simple_repeat Simple_repeat 2 32 0 2306 80 10 0 chr2 14964178 14964302 -235723552 - AluSg SINE Alu -188 122 1 299 265 83 61 chr2 14964405 14964537 -235723317 + MIR SINE MIR 51 185 -77 1855 101 0 4 chr2 14966168 14966416 -235721438 - AluSx SINE Alu -32 280 34 2203 107 10 10 chr2 14967023 14967331 -235720523 + AluY SINE Alu 2 309 -2 497 259 145 6 chr2 14968039 14968246 -235719608 - MIR SINE MIR -24 238 6 1788 168 3 7 chr2 14969105 14969402 -235718452 - AluJo SINE Alu -4 308 13 22 0 0 0 chr2 14971335 14971357 -235716497 + AT_rich Low_complexity Low_complexity 1 22 0 497 365 109 8 chr2 14971601 14971996 -235715858 + L3 LINE CR1 1098 1532 -45 2179 95 0 47 chr2 14972497 14972840 -235715014 - AluSx SINE Alu 0 312 1 291 276 125 30 chr2 14973070 14973302 -235714552 + L1 LINE L1 4763 5016 -1130 3063 181 41 5 chr2 14973400 14973964 -235713890 - MER21B-int LTR ERV1 -2914 3844 3261 912 54 0 0 chr2 14973964 14974075 -235713779 - AluY SINE Alu 0 311 201 1418 193 16 0 chr2 14974078 14974321 -235713533 - MER21B-int LTR ERV1 -3944 247 1 302 256 24 12 chr2 14974371 14974453 -235713401 - MER21B LTR ERV1 -54 809 727 1995 173 106 3 chr2 14974525 14974894 -235712960 - MER21B LTR ERV1 -128 735 329 1943 119 12 44 chr2 14975919 14976238 -235711616 - AluSx SINE Alu -3 309 1 1097 305 72 4 chr2 14977852 14978443 -235709411 - L2 LINE L2 -9 3304 2659 1571 249 150 43 chr2 14978445 14979159 -235708695 - L2 LINE L2 -1121 2193 1404 933 233 89 21 chr2 14979713 14979949 -235707905 - MIR SINE MIR 0 262 11 795 190 6 62 chr2 14980047 14980226 -235707628 - FRAM SINE Alu -14 162 1 1462 183 119 4 chr2 14980814 14981082 -235706772 - AluJb SINE Alu -13 299 1 489 114 14 142 chr2 14981416 14981474 -235706380 - L1MB5 LINE L1 0 6174 6138 2122 114 7 3 chr2 14981474 14981771 -235706083 + AluSx SINE Alu 1 298 -14 489 114 14 142 chr2 14981771 14981846 -235706008 - L1MB5 LINE L1 -36 6138 6055 909 196 35 23 chr2 14981897 14982070 -235705784 - FAM SINE Alu 0 175 1 187 380 42 0 chr2 14982178 14982249 -235705605 - L2 LINE L2 -6 3307 3234 201 234 19 131 chr2 14983010 14983117 -235704737 + MER5A DNA MER1_type 46 140 -49 1717 181 16 0 chr2 14983155 14983458 -235704396 - AluJo SINE Alu -4 308 1 1127 198 54 7 chr2 14983458 14983736 -235704118 - L1M4 LINE L1 -948 5198 4908 6709 60 9 42 chr2 14984109 14985414 -235702440 - SVA Other Other -520 1386 432 5817 75 27 18 chr2 14985428 14986282 -235701572 - SVA Other Other -520 866 5 25 0 0 0 chr2 14986406 14986431 -235701423 + AT_rich Low_complexity Low_complexity 1 25 0 1969 108 63 7 chr2 14987061 14987348 -235700506 - AluSq SINE Alu -10 303 1 827 211 128 40 chr2 14987682 14988026 -235699828 + MLT1A1 LTR MaLR 1 396 0 311 227 30 0 chr2 14988661 14988727 -235699127 + L2 LINE L2 3227 3294 -19 207 0 0 0 chr2 14989112 14989135 -235698719 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1946 112 18 0 chr2 14989138 14989290 -235698564 - AluSx SINE Alu -30 282 121 225 0 0 0 chr2 14989290 14989315 -235698539 + (TG)n Simple_repeat Simple_repeat 2 26 0 1946 112 18 0 chr2 14989315 14989439 -235698415 - AluSx SINE Alu -191 121 1 520 238 69 48 chr2 14989453 14989642 -235698212 - MIR SINE MIR 0 262 70 268 307 92 26 chr2 14989781 14989934 -235697920 + MIR SINE MIR 100 262 0 494 218 123 52 chr2 14989971 14990182 -235697672 - MIR SINE MIR -4 258 33 21 0 0 0 chr2 14990330 14990351 -235697503 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 14990701 14990739 -235697115 + AT_rich Low_complexity Low_complexity 1 38 0 1508 179 61 7 chr2 14991552 14991848 -235696006 - MER52A LTR ERV1 0 1755 1444 * 2222 204 131 14 chr2 14991834 14992339 -235695515 - MER52A LTR ERV1 -990 765 202 268 247 72 10 chr2 14992684 14992781 -235695073 - MER52A LTR ERV1 -1652 103 1 254 229 71 0 chr2 14993228 14993298 -235694556 - MIR SINE MIR -112 150 76 23 0 0 0 chr2 14993380 14993403 -235694451 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 14994030 14994060 -235693794 + AT_rich Low_complexity Low_complexity 1 30 0 1982 120 20 23 chr2 14994534 14994833 -235693021 - AluSq SINE Alu -15 298 1 2176 135 0 3 chr2 14994877 14995181 -235692673 - AluSx SINE Alu -9 303 1 1054 110 30 0 chr2 14995378 14995542 -235692312 - L1MB3 LINE L1 -1 6182 6014 565 235 80 44 chr2 14997305 14997530 -235690324 + L1M4 LINE L1 2174 2407 -3739 2227 104 116 0 chr2 14997599 14997935 -235689919 - THE1C LTR MaLR 0 375 1 2331 220 103 37 chr2 14997942 14998668 -235689186 + L1ME2 LINE L1 5381 6154 -10 350 206 71 52 chr2 15002367 15002522 -235685332 - L1MC4 LINE L1 -2 8040 7883 24 67 0 0 chr2 15003814 15003859 -235683995 + AT_rich Low_complexity Low_complexity 1 45 0 1829 132 0 63 chr2 15004775 15005130 -235682724 - AluJb SINE Alu 0 312 1 300 299 123 13 chr2 15005625 15005779 -235682075 - MIR3 SINE MIR -17 191 21 285 262 0 0 chr2 15006169 15006230 -235681624 + MLT1J LTR MaLR 148 208 -303 977 191 0 11 chr2 15007095 15007278 -235680576 - AluJb SINE Alu -1 311 131 342 335 132 0 chr2 15007773 15007955 -235679899 - L1ME LINE L1 -391 5730 5525 297 265 10 39 chr2 15008837 15008939 -235678915 - MER5A DNA MER1_type -90 99 1 611 228 111 19 chr2 15009113 15009275 -235678579 - MER5B DNA MER1_type -1 177 1 264 257 50 50 chr2 15009526 15009627 -235678227 - MARNA DNA Mariner -73 513 413 709 285 40 5 chr2 15011834 15012065 -235675789 - MIR SINE MIR 0 262 24 212 226 0 38 chr2 15012251 15012304 -235675550 - MIR SINE MIR -55 153 103 2194 130 0 6 chr2 15012327 15012642 -235675212 - AluSq SINE Alu 0 313 1 2006 153 0 13 chr2 15012769 15013083 -235674771 - AluJo SINE Alu -2 310 1 1024 220 29 4 chr2 15014460 15014705 -235673149 + L1M4 LINE L1 2479 2729 -3417 1868 201 7 14 chr2 15014708 15015145 -235672709 + L1M4 LINE L1 2813 3246 -2900 274 281 0 12 chr2 15015146 15015228 -235672626 - MIR SINE MIR -150 112 32 377 265 52 22 chr2 15015237 15015373 -235672481 + L2 LINE L2 3132 3271 -1 257 202 67 45 chr2 15016976 15017065 -235670789 - MLT1J LTR MaLR -5 506 416 767 267 34 103 chr2 15017112 15017557 -235670297 - MLT1J LTR MaLR -93 418 5 351 290 99 59 chr2 15017634 15017906 -235669948 - L2 LINE L2 0 3272 2990 859 248 191 51 chr2 15018061 15018578 -235669276 - MLT1K LTR MaLR 0 615 2 273 289 67 30 chr2 15018621 15018756 -235669098 - MIR3 SINE MIR -68 140 1 1366 159 133 30 chr2 15018883 15019153 -235668701 + AluJb SINE Alu 1 298 -14 2372 95 0 0 chr2 15019620 15019924 -235667930 - AluSx SINE Alu -8 304 1 2688 172 42 0 chr2 15019954 15020455 -235667399 + L1MB3 LINE L1 5622 6143 -40 2257 112 0 3 chr2 15020455 15020760 -235667094 - AluSx SINE Alu -8 304 1 537 118 12 0 chr2 15021093 15021178 -235666676 + L1MB8 LINE L1 6087 6172 -6 1609 184 8 15 chr2 15021517 15021784 -235666070 + AluJb SINE Alu 2 266 -46 838 26 26 52 chr2 15021811 15021965 -235665889 + (GGAA)n Simple_repeat Simple_repeat 3 152 0 1012 161 0 0 chr2 15022469 15022624 -235665230 + AluSg/x SINE Alu 134 288 -24 377 319 73 39 chr2 15023500 15023732 -235664122 - L3 LINE CR1 -352 1225 986 2006 141 10 7 chr2 15024752 15025049 -235662805 - AluSx SINE Alu -14 298 1 2495 70 0 22 chr2 15025049 15025365 -235662489 - AluY SINE Alu -2 309 1 23 0 0 0 chr2 15025375 15025398 -235662456 + AT_rich Low_complexity Low_complexity 1 23 0 368 295 38 24 chr2 15025940 15026134 -235661720 - MIR SINE MIR -58 150 3 257 311 107 0 chr2 15026606 15026728 -235661126 + MIR SINE MIR 47 181 -81 250 366 18 6 chr2 15028868 15029032 -235658822 - L2 LINE L2 -559 2755 2590 396 272 0 10 chr2 15029234 15029337 -235658517 + MER5A DNA MER1_type 60 161 -28 196 292 133 9 chr2 15029404 15029517 -235658337 + L2 LINE L2 3144 3270 -2 716 253 50 0 chr2 15030274 15030472 -235657382 - MER3 DNA MER1_type 0 209 2 1971 126 0 14 chr2 15030639 15030955 -235656899 + AluY SINE Alu 1 312 0 418 218 18 55 chr2 15031529 15031639 -235656215 - LTR67 LTR ERVL -449 108 3 1006 336 22 24 chr2 15031752 15032293 -235655561 + L2 LINE L2 2317 2856 -458 207 333 57 38 chr2 15032342 15032501 -235655353 + L2 LINE L2 2916 3077 -195 497 298 37 37 chr2 15032717 15032932 -235654922 + MIR SINE MIR 47 261 -1 974 250 28 20 chr2 15033112 15033364 -235654490 - MIR SINE MIR -8 254 1 776 263 18 28 chr2 15034164 15034381 -235653473 - MIR SINE MIR -41 221 7 2275 80 0 10 chr2 15036280 15036569 -235651285 - AluY SINE Alu -11 300 15 2373 205 104 4 chr2 15037001 15037548 -235650306 + L1MB5 LINE L1 5573 6174 0 398 229 83 10 chr2 15040063 15040159 -235647695 - L2 LINE L2 0 3272 3170 197 179 71 18 chr2 15040158 15040214 -235647640 + MIR SINE MIR 199 257 -5 * 213 392 40 20 chr2 15041442 15041641 -235646213 - L2 LINE L2 -244 3028 2826 207 0 0 0 chr2 15043072 15043095 -235644759 + (T)n Simple_repeat Simple_repeat 1 23 0 2437 82 0 13 chr2 15043113 15043428 -235644426 - AluY SINE Alu 0 311 1 2610 148 19 2 chr2 15043430 15043897 -235643957 - L1M3 LINE L1 -345 5823 5349 309 286 67 9 chr2 15043898 15044003 -235643851 - MIR3 SINE MIR -88 120 10 276 277 40 113 chr2 15044552 15044729 -235643125 + MIR SINE MIR 5 168 -40 207 218 18 73 chr2 15044751 15044806 -235643048 - L2 LINE L2 -17 3255 3204 1737 209 72 59 chr2 15044897 15044943 -235642911 + MLT1F LTR MaLR 1 45 -497 2349 100 3 0 chr2 15044943 15045243 -235642611 - AluSp SINE Alu -12 301 1 1737 209 72 59 chr2 15045243 15045722 -235642132 + MLT1F LTR MaLR 45 533 -9 271 311 52 37 chr2 15046760 15046895 -235640959 + MIR SINE MIR 35 171 -91 1409 192 32 3 chr2 15047390 15047702 -235640152 + L1MB8 LINE L1 5852 6172 -6 262 284 53 11 chr2 15047815 15047910 -235639944 - MIR3 SINE MIR -50 158 60 397 305 29 29 chr2 15048276 15048450 -235639404 - MIR3 SINE MIR -23 185 12 312 298 153 15 chr2 15048855 15048986 -235638868 + MIR SINE MIR 44 192 -70 2079 127 7 0 chr2 15049290 15049582 -235638272 - AluSq SINE Alu -19 294 1 2260 107 24 0 chr2 15050029 15050327 -235637527 + AluSx SINE Alu 1 305 -7 280 328 40 56 chr2 15050547 15050672 -235637182 - MIR SINE MIR -66 142 20 936 160 33 144 chr2 15051211 15051517 -235636337 + LTR35 LTR ERV1 296 567 -51 225 226 0 0 chr2 15051517 15051570 -235636284 + (TG)n Simple_repeat Simple_repeat 1 53 0 1613 214 0 0 chr2 15051584 15051878 -235635976 - AluJo SINE Alu -18 294 1 28 71 0 0 chr2 15052691 15052747 -235635107 + AT_rich Low_complexity Low_complexity 1 56 0 235 283 151 28 chr2 15052859 15052965 -235634889 + L2 LINE L2 3175 3293 -20 2804 137 28 8 chr2 15052968 15053464 -235634390 - Tigger3b DNA MER2_type 0 1231 726 1379 216 0 51 chr2 15053487 15053783 -235634071 - AluJo SINE Alu -31 281 1 2447 148 81 6 chr2 15053794 15054313 -235633541 - Tigger3b DNA MER2_type -656 575 18 2227 122 0 0 chr2 15054364 15054667 -235633187 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr2 15054800 15054821 -235633033 + AT_rich Low_complexity Low_complexity 1 21 0 2376 101 0 16 chr2 15054830 15055148 -235632706 + AluSp SINE Alu 1 313 0 1621 154 0 93 chr2 15055329 15055653 -235632201 + AluJo SINE Alu 1 294 -8 499 225 141 31 chr2 15055876 15056067 -235631787 + MLT2C1 LTR ERVL 13 224 -173 853 139 0 53 chr2 15056074 15056225 -235631629 + FLAM_C SINE Alu 1 143 0 234 273 8 61 chr2 15056318 15056450 -235631404 + MLT2C1 LTR ERVL 336 460 -4 1501 193 30 10 chr2 15056966 15057267 -235630587 + MLT1F1 LTR MaLR 85 391 -176 377 289 65 107 chr2 15057262 15057384 -235630470 + MLT1G LTR MaLR 52 178 -377 * 2282 94 7 0 chr2 15057384 15057681 -235630173 + AluSp SINE Alu 1 299 -14 377 289 65 107 chr2 15057681 15058084 -235629770 + MLT1G LTR MaLR 178 555 0 288 281 161 45 chr2 15058528 15058707 -235629147 - MIR SINE MIR -51 211 14 291 290 113 61 chr2 15059051 15059282 -235628572 + MIR SINE MIR 14 256 -6 337 113 62 1 chr2 15059525 15059609 -235628245 + Alu SINE Alu 242 290 -12 549 216 134 47 chr2 15060584 15060755 -235627099 - MIR SINE MIR -29 233 48 237 261 23 11 chr2 15060945 15061033 -235626821 - L1MC4 LINE L1 -14 8028 7940 280 227 9 18 chr2 15061107 15061217 -235626637 + (CATATA)n Simple_repeat Simple_repeat 2 110 0 475 189 0 0 chr2 15061221 15061316 -235626538 - L1MC4 LINE L1 -126 7916 7822 2372 101 0 0 chr2 15061325 15061631 -235626223 - AluSg SINE Alu -4 306 1 316 294 39 20 chr2 15061852 15062005 -235625849 + MLT1I LTR MaLR 93 248 -161 186 133 0 0 chr2 15062940 15062970 -235624884 + (CA)n Simple_repeat Simple_repeat 2 31 0 674 205 25 56 chr2 15063271 15063432 -235624422 + MIR SINE MIR 17 172 -90 1693 156 7 18 chr2 15063442 15063724 -235624130 - AluJb SINE Alu -27 285 7 2654 89 18 8 chr2 15063724 15064117 -235623737 + THE1C-int LTR MaLR 1184 1580 0 1822 143 54 40 chr2 15064117 15064487 -235623367 + THE1C LTR MaLR 1 375 0 222 250 200 0 chr2 15064490 15064570 -235623284 + MIR SINE MIR 163 258 -4 249 316 113 38 chr2 15064647 15064780 -235623074 - MIR SINE MIR -81 181 39 433 236 161 35 chr2 15065061 15065235 -235622619 - MIR SINE MIR -1 261 66 1809 185 0 0 chr2 15066478 15066764 -235621090 - AluJb SINE Alu -26 286 1 21 0 0 0 chr2 15067525 15067546 -235620308 + AT_rich Low_complexity Low_complexity 1 21 0 369 275 47 62 chr2 15067927 15068120 -235619734 - MIR SINE MIR -5 257 68 265 323 116 12 chr2 15068834 15069085 -235618769 + L1MC4a LINE L1 5633 5909 -1899 428 304 111 37 chr2 15070053 15070431 -235617423 + L1MB5 LINE L1 4976 5381 -765 236 239 0 0 chr2 15070521 15070567 -235617287 + L1MB5 LINE L1 5589 5634 -2174 731 239 86 14 chr2 15070585 15070794 -235617060 - MIR SINE MIR -37 225 2 2233 140 0 19 chr2 15071585 15071957 -235615897 - MER47A DNA MER2_type -1 365 1 25 31 0 0 chr2 15072070 15072102 -235615752 + AT_rich Low_complexity Low_complexity 1 32 0 632 151 0 0 chr2 15073072 15073178 -235614676 + L1MB5 LINE L1 6069 6174 0 21 36 0 0 chr2 15073226 15073254 -235614600 + AT_rich Low_complexity Low_complexity 1 28 0 734 167 45 15 chr2 15073381 15073513 -235614341 - AluJo SINE Alu -176 136 1 28 86 0 0 chr2 15073639 15073709 -235614145 + AT_rich Low_complexity Low_complexity 1 70 0 28 0 0 0 chr2 15074459 15074487 -235613367 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 15074617 15074647 -235613207 + AT_rich Low_complexity Low_complexity 1 30 0 236 365 48 7 chr2 15075417 15075562 -235612292 - L2 LINE L2 -3 3310 3160 304 316 110 37 chr2 15075622 15076020 -235611834 - L2 LINE L2 -250 3022 2596 21 36 0 0 chr2 15076299 15076327 -235611527 + AT_rich Low_complexity Low_complexity 1 28 0 243 305 11 74 chr2 15077374 15077469 -235610385 + MIR SINE MIR 51 139 -69 209 385 33 11 chr2 15079380 15079471 -235608383 - L2 LINE L2 -187 3085 2993 249 306 93 0 chr2 15079706 15079814 -235608040 + L2 LINE L2 2219 2336 -978 2095 82 45 0 chr2 15080217 15080484 -235607370 - AluY SINE Alu -16 295 17 1853 159 0 10 chr2 15080772 15081068 -235606786 - AluJb SINE Alu -19 293 1 566 261 37 5 chr2 15081192 15081410 -235606444 - L1M4 LINE L1 -1538 4608 4384 1786 237 16 20 chr2 15081535 15082084 -235605770 + L1ME3A LINE L1 5416 5962 -208 557 263 17 17 chr2 15082328 15082503 -235605351 + LTR16C LTR ERVL 287 461 -30 207 238 0 24 chr2 15082637 15082679 -235605175 - MIR SINE MIR -137 71 31 227 233 233 0 chr2 15082776 15082879 -235604975 + L1ME2 LINE L1 53 179 -6217 542 125 0 0 chr2 15082891 15082971 -235604883 - AluJ/FRAM SINE Alu -11 301 222 960 278 147 8 chr2 15082971 15083461 -235604393 + L1ME2 LINE L1 191 748 -5648 * 1213 250 32 22 chr2 15083458 15083862 -235603992 + L1MA9 LINE L1 5867 6274 -38 915 249 71 85 chr2 15083881 15083966 -235603888 + L1ME2 LINE L1 738 823 -5573 2280 87 14 3 chr2 15083966 15084255 -235603599 + AluSg SINE Alu 1 292 -18 915 249 71 85 chr2 15084255 15085410 -235602444 + L1ME2 LINE L1 823 1960 -4436 1648 224 73 29 chr2 15085477 15087086 -235600768 + L1ME2 LINE L1 4282 6063 -170 510 233 23 40 chr2 15087122 15087296 -235600558 + L1MA10 LINE L1 6004 6333 -1 24 0 0 0 chr2 15087305 15087329 -235600525 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr2 15088927 15088967 -235598887 + AT_rich Low_complexity Low_complexity 1 40 0 347 274 335 6 chr2 15089183 15089362 -235598492 - MIR SINE MIR -6 256 19 25 0 0 0 chr2 15090476 15090501 -235597353 + AT_rich Low_complexity Low_complexity 1 25 0 198 71 0 0 chr2 15091224 15091252 -235596602 + (TG)n Simple_repeat Simple_repeat 2 29 0 1652 159 51 4 chr2 15091254 15091564 -235596290 - AluJo SINE Alu 0 323 1 961 268 208 34 chr2 15092759 15093771 -235594083 + HAL1 LINE L1 1243 2430 -77 324 221 19 91 chr2 15093877 15094031 -235593823 - L1MC4 LINE L1 -408 7634 7492 320 292 31 0 chr2 15094012 15094108 -235593746 - L1MC5 LINE L1 -550 7411 7313 * 471 289 93 32 chr2 15094094 15094405 -235593449 - L1MC4a LINE L1 -393 7415 7086 244 230 27 27 chr2 15094499 15094573 -235593281 + GA-rich Low_complexity Low_complexity 2 75 0 289 289 0 13 chr2 15094577 15094653 -235593201 - MIR3 SINE MIR -49 159 85 231 325 0 0 chr2 15096076 15096153 -235591701 + MIR SINE MIR 124 200 -62 1872 133 32 52 chr2 15096495 15096842 -235591012 - MER2 DNA MER2_type -1 343 4 324 0 0 0 chr2 15096998 15097034 -235590820 + (TG)n Simple_repeat Simple_repeat 2 37 0 900 144 0 0 chr2 15097042 15097174 -235590680 - FLAM_C SINE Alu -1 132 1 863 255 19 14 chr2 15097183 15097391 -235590463 - MIR SINE MIR -25 237 29 2198 122 0 6 chr2 15097634 15097946 -235589908 - AluSx SINE Alu -2 310 1 1430 272 67 34 chr2 15098857 15100254 -235587600 + L1MC/D LINE L1 4278 5734 -787 324 202 157 0 chr2 15100279 15100368 -235587486 + MER3 DNA MER1_type 107 209 0 229 250 11 33 chr2 15100718 15100810 -235587044 + L1ME LINE L1 5410 5499 -671 1979 186 110 22 chr2 15100876 15101338 -235586516 - MLT1D LTR MaLR -2 503 1 282 315 38 33 chr2 15101615 15101799 -235586055 - L1MCa LINE L1 -746 1744 1407 455 320 110 14 chr2 15101800 15102019 -235585835 + MIR SINE MIR 2 241 -21 733 159 0 16 chr2 15102023 15102149 -235585705 + FLAM_C SINE Alu 1 124 -19 367 366 41 5 chr2 15102209 15102403 -235585451 - L1MCa LINE L1 -4797 1513 1313 943 296 102 66 chr2 15102449 15103322 -235584532 - L1MCa LINE L1 -4903 1216 313 398 326 40 43 chr2 15104367 15104643 -235583211 - L1MCa LINE L1 -5831 288 14 1017 298 69 6 chr2 15105304 15105666 -235582188 + MLT1I LTR MaLR 25 409 0 1840 209 28 43 chr2 15105839 15106371 -235581483 + MER65B LTR ERV1 1 524 -7 384 376 110 19 chr2 15106396 15106715 -235581139 - L2 LINE L2 0 3272 2925 188 396 38 0 chr2 15106775 15106934 -235580920 - L2 LINE L2 -463 2851 2687 286 297 92 46 chr2 15107462 15107657 -235580197 - L3 LINE CR1 -10 1567 1364 2405 86 0 0 chr2 15107796 15108097 -235579757 + AluSx SINE Alu 1 301 -11 615 297 36 10 chr2 15108193 15108388 -235579466 + MIR SINE MIR 8 207 -55 216 0 0 0 chr2 15109219 15109243 -235578611 + (GA)n Simple_repeat Simple_repeat 2 25 0 2298 101 0 7 chr2 15109655 15109963 -235577891 + AluSx SINE Alu 1 306 -6 195 230 0 150 chr2 15111251 15111351 -235576503 + L2 LINE L2 3223 3307 -6 265 299 133 77 chr2 15111566 15111971 -235575883 - L2 LINE L2 -14 3258 2831 225 0 0 0 chr2 15112469 15112494 -235575360 + (TG)n Simple_repeat Simple_repeat 2 26 0 246 81 0 0 chr2 15112523 15112560 -235575294 + (TG)n Simple_repeat Simple_repeat 2 38 0 774 214 7 7 chr2 15112561 15112715 -235575139 - FAM SINE Alu -17 158 5 2260 107 0 3 chr2 15112845 15113145 -235574709 - AluY SINE Alu -12 299 1 2853 159 56 16 chr2 15114952 15115524 -235572330 - L1MC1 LINE L1 -6 6327 5733 603 176 114 0 chr2 15115529 15115660 -235572194 + L1MC2 LINE L1 6189 6334 -10 225 231 119 90 chr2 15116228 15116362 -235571492 + MIR3 SINE MIR 41 178 -30 34 0 0 0 chr2 15116605 15116639 -235571215 + AT_rich Low_complexity Low_complexity 1 34 0 236 393 8 33 chr2 15116836 15116958 -235570896 - MIR3 SINE MIR -75 133 15 208 239 0 0 chr2 15117665 15117711 -235570143 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 272 292 35 35 chr2 15117889 15118033 -235569821 + MER5B DNA MER1_type 29 172 -6 197 281 171 91 chr2 15118421 15118631 -235569223 + MIR SINE MIR 19 245 -17 181 305 76 47 chr2 15118936 15119172 -235568682 + L2 LINE L2 1935 2177 -1137 532 320 75 9 chr2 15119250 15119478 -235568376 - HAL1 LINE L1 -880 1627 1385 580 275 101 27 chr2 15119488 15119935 -235567919 - HAL1 LINE L1 -1173 1334 855 359 294 122 20 chr2 15119937 15120182 -235567672 - HAL1 LINE L1 -1708 799 530 915 172 43 48 chr2 15121287 15121496 -235566358 + MER3 DNA MER1_type 2 209 0 1277 188 0 52 chr2 15121581 15121831 -235566023 + AluJo SINE Alu 1 237 -75 2167 114 17 0 chr2 15121895 15122192 -235565662 + AluY SINE Alu 1 302 -9 258 243 43 0 chr2 15122318 15122388 -235565466 + MIR3 SINE MIR 133 205 -3 188 324 0 15 chr2 15122622 15122690 -235565164 - L2 LINE L2 -526 2788 2722 204 125 0 0 chr2 15123495 15123527 -235564327 + (ATG)n Simple_repeat Simple_repeat 2 33 0 620 299 60 20 chr2 15123578 15123829 -235564025 - MIR SINE MIR 0 262 2 1976 138 7 7 chr2 15123942 15124240 -235563614 - AluSx SINE Alu -14 298 1 422 328 15 8 chr2 15124577 15124708 -235563146 + L2 LINE L2 3182 3313 0 760 284 34 21 chr2 15126295 15126531 -235561323 + MIR SINE MIR 10 248 -14 1356 157 12 94 chr2 15126948 15127267 -235560587 + AluJo SINE Alu 1 293 -19 203 206 49 39 chr2 15127346 15127448 -235560406 + (CAAGA)n Simple_repeat Simple_repeat 5 107 0 815 228 86 39 chr2 15128543 15128775 -235559079 - MIR SINE MIR -10 252 10 252 276 14 145 chr2 15129814 15129959 -235557895 + L2 LINE L2 3040 3165 -107 219 296 0 28 chr2 15130030 15130101 -235557753 + (TGGA)n Simple_repeat Simple_repeat 4 72 0 540 234 24 0 chr2 15130336 15130460 -235557394 + FLAM_A SINE Alu 1 127 -6 21 0 0 0 chr2 15130886 15130907 -235556947 + AT_rich Low_complexity Low_complexity 1 21 0 1503 266 49 67 chr2 15131538 15132147 -235555707 + L1MEc LINE L1 11 605 -5791 2234 86 3 25 chr2 15132147 15132462 -235555392 + AluY SINE Alu 1 308 -3 1503 266 49 67 chr2 15132462 15132612 -235555242 + L1MEc LINE L1 605 756 -5640 44111 37 1 4 chr2 15132634 15138801 -235549053 + L1PA3 LINE L1 2 6154 -1 2339 247 74 43 chr2 15138826 15140167 -235547687 + L1MEc LINE L1 758 2219 -4177 302 253 21 77 chr2 15140227 15140421 -235547433 + L1MEc LINE L1 2178 2360 -4036 572 266 148 5 chr2 15140573 15140776 -235547078 + L1ME3A LINE L1 5937 6168 -2 1135 199 77 106 chr2 15140921 15141297 -235546557 - MLT1A1 LTR MaLR 0 365 1 228 227 162 3 chr2 15141540 15141621 -235546233 - MIR SINE MIR -56 152 72 32 0 0 0 chr2 15142354 15142386 -235545468 + AT_rich Low_complexity Low_complexity 1 32 0 195 306 16 16 chr2 15143518 15143580 -235544274 + L2 LINE L2 2998 3059 -213 309 109 0 0 chr2 15144158 15144204 -235543650 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 1594 183 7 4 chr2 15144205 15144484 -235543370 - AluJo SINE Alu -32 280 1 1485 161 45 3 chr2 15145112 15145403 -235542451 + L1MB2 LINE L1 5855 6157 -14 2393 52 24 0 chr2 15145451 15145738 -235542116 + AluY SINE Alu 5 298 -13 2441 83 0 0 chr2 15146904 15147206 -235540648 - AluSc SINE Alu -3 306 5 558 126 27 45 chr2 15147480 15147591 -235540263 + L1MD3 LINE L1 7730 7838 -157 2342 78 10 0 chr2 15148043 15148336 -235539518 - AluSx SINE Alu -16 296 1 437 248 44 0 chr2 15148507 15148620 -235539234 + L1MD3 LINE L1 7838 7955 -40 596 243 71 12 chr2 15148711 15148880 -235538974 - MIR SINE MIR 0 262 84 431 256 34 8 chr2 15149591 15149708 -235538146 - L2 LINE L2 0 3313 3194 680 254 68 42 chr2 15149720 15149984 -235537870 - L2 LINE L2 0 3313 3043 513 286 136 14 chr2 15149998 15150278 -235537576 - L2 LINE L2 -144 3169 2856 2294 167 49 5 chr2 15151451 15151859 -235535995 + MSTB LTR MaLR 1 426 0 2186 82 53 0 chr2 15152630 15152912 -235534942 - AluY SINE Alu -14 297 1 201 287 357 6 chr2 15153029 15153186 -235534668 + MIR SINE MIR 50 261 -1 27 29 0 0 chr2 15154224 15154258 -235533596 + AT_rich Low_complexity Low_complexity 1 34 0 404 223 65 50 chr2 15155318 15155457 -235532397 - L2 LINE L2 0 3313 3173 259 270 0 139 chr2 15155597 15155712 -235532142 + L2 LINE L2 3174 3272 0 353 289 155 56 chr2 15155740 15156114 -235531740 - L2 LINE L2 -907 2407 1997 1707 192 0 3 chr2 15156124 15156416 -235531438 + AluJo SINE Alu 1 291 -21 534 319 111 28 chr2 15156417 15156887 -235530967 + L2 LINE L2 725 1233 -2081 533 236 70 79 chr2 15156893 15157236 -235530618 + L1MC5 LINE L1 7556 7895 -66 910 290 112 39 chr2 15157280 15157869 -235529985 + L2 LINE L2 1218 1849 -1465 426 274 105 26 chr2 15158051 15158204 -235529650 + MIR SINE MIR 6 170 -92 366 266 62 0 chr2 15158278 15158391 -235529463 - L2 LINE L2 -5 3308 3189 180 353 163 41 chr2 15158445 15158666 -235529188 + L2 LINE L2 3021 3268 -4 27 29 0 0 chr2 15158934 15158968 -235528886 + AT_rich Low_complexity Low_complexity 1 34 0 1886 173 3 0 chr2 15159790 15160085 -235527769 + AluJb SINE Alu 2 297 -15 2420 50 0 0 chr2 15162231 15162548 -235525306 - L1P LINE L1 -2891 3255 2939 4680 54 0 3 chr2 15162548 15163133 -235524721 + L1PA5 LINE L1 5565 6152 -2 462 271 9 0 chr2 15163579 15163686 -235524168 - L2 LINE L2 -2 3311 3204 1397 120 0 10 chr2 15163906 15164114 -235523740 + AluSq SINE Alu 96 301 -12 1351 236 52 35 chr2 15164750 15165118 -235522736 + MLT1A2 LTR MaLR 1 374 0 438 220 207 7 chr2 15165215 15165365 -235522489 + LTR41 LTR ERVL 8 187 -586 387 276 91 47 chr2 15165809 15166063 -235521791 + LTR41 LTR ERVL 503 767 -6 2075 113 3 0 chr2 15167680 15167994 -235519860 - AluSx SINE Alu 0 315 1 22 80 0 0 chr2 15169060 15169110 -235518744 + AT_rich Low_complexity Low_complexity 1 50 0 2135 114 24 0 chr2 15169574 15169872 -235517982 + AluSg SINE Alu 1 305 -5 2071 96 35 0 chr2 15170402 15170684 -235517170 - AluSx SINE Alu -19 293 2 239 139 0 0 chr2 15170921 15170964 -235516890 - L1ME4a LINE L1 -1 6120 6078 204 228 152 25 chr2 15172970 15173049 -235514805 + L2 LINE L2 3184 3272 0 1708 197 3 3 chr2 15173192 15173496 -235514358 + AluJo SINE Alu 1 304 -8 27 0 0 0 chr2 15173561 15173588 -235514266 + AT_rich Low_complexity Low_complexity 1 27 0 2586 188 12 2 chr2 15173951 15174447 -235513407 - L1MB5 LINE L1 -8 6166 5666 241 213 0 0 chr2 15174700 15174747 -235513107 + MER39 LTR ERV1 1 47 -660 2119 130 76 80 chr2 15174799 15175283 -235512571 + MER39 LTR ERV1 1 554 -153 1672 146 52 4 chr2 15175283 15175551 -235512303 - AluJb SINE Alu -31 281 1 2119 130 76 80 chr2 15175551 15175705 -235512149 + MER39 LTR ERV1 554 707 0 657 142 0 9 chr2 15175952 15176058 -235511796 + MER39 LTR ERV1 598 702 -5 262 321 160 0 chr2 15176298 15176404 -235511450 - L2 LINE L2 -2 3270 3148 861 70 86 0 chr2 15177565 15177693 -235510161 - MER85 DNA T2_type 0 139 1 21 0 0 0 chr2 15178415 15178436 -235509418 + AT_rich Low_complexity Low_complexity 1 21 0 182 345 0 18 chr2 15178669 15178724 -235509130 + MIR SINE MIR 54 107 -155 993 220 72 5 chr2 15180487 15180710 -235507144 + MER8 DNA MER2_type 2 239 0 224 295 13 0 chr2 15182606 15182684 -235505170 + GA-rich Low_complexity Low_complexity 2 80 0 379 279 74 0 chr2 15183086 15183208 -235504646 + Charlie8 DNA MER1_type 136 266 -2151 301 254 0 0 chr2 15183289 15183352 -235504502 + Charlie8 DNA MER1_type 2343 2405 -12 275 357 39 31 chr2 15183760 15183889 -235503965 - MIR3 SINE MIR -53 155 26 27 29 0 0 chr2 15184171 15184205 -235503649 + AT_rich Low_complexity Low_complexity 1 34 0 1011 225 76 86 chr2 15184217 15184588 -235503266 + MER39 LTR ERV1 1 536 -171 2539 71 0 0 chr2 15184588 15184899 -235502955 + AluY SINE Alu 1 311 0 1011 225 76 86 chr2 15184899 15185070 -235502784 + MER39 LTR ERV1 536 707 0 410 220 85 51 chr2 15185246 15185423 -235502431 - L1MC5 LINE L1 -64 7897 7715 1945 148 0 14 chr2 15185595 15185892 -235501962 - AluJb SINE Alu -17 295 3 1802 155 57 35 chr2 15186068 15186435 -235501419 + THE1C LTR MaLR 1 375 0 2075 139 3 0 chr2 15186519 15186820 -235501034 + AluSx SINE Alu 1 302 -10 2036 116 23 0 chr2 15186956 15187257 -235500597 - AluSx SINE Alu -4 308 1 335 323 32 38 chr2 15187382 15187540 -235500314 + MIR SINE MIR 57 213 -49 387 203 138 89 chr2 15188374 15188665 -235499189 + L1MC5 LINE L1 7223 7527 -434 3206 191 46 10 chr2 15188876 15189207 -235498647 + L1MB8 LINE L1 5444 5762 -416 378 91 0 0 chr2 15189207 15189262 -235498592 + (CA)n Simple_repeat Simple_repeat 2 56 0 3206 191 46 10 chr2 15189262 15189631 -235498223 + L1MB8 LINE L1 5762 6169 -9 343 216 10 10 chr2 15189711 15189813 -235498041 + GA-rich Low_complexity Low_complexity 4 105 0 885 340 135 36 chr2 15189881 15190872 -235496982 - L2 LINE L2 -29 3284 2196 24 0 0 70 chr2 15191471 15191514 -235496340 + AT_rich Low_complexity Low_complexity 1 40 0 4577 88 22 12 chr2 15191558 15191717 -235496137 + L1PA13 LINE L1 5482 5638 -525 1552 118 226 47 chr2 15191717 15191880 -235495974 + MSTA LTR MaLR 1 133 -295 192 40 0 0 chr2 15191880 15191905 -235495949 + (TC)n Simple_repeat Simple_repeat 1 25 0 1552 118 226 47 chr2 15191905 15192063 -235495791 + MSTA LTR MaLR 133 261 -167 2074 138 10 3 chr2 15192063 15192361 -235495493 - AluSx SINE Alu -12 300 1 1552 118 226 47 chr2 15192361 15192401 -235495453 + MSTA LTR MaLR 261 428 0 4577 88 22 12 chr2 15192401 15192908 -235494946 + L1PA13 LINE L1 5638 6155 -8 323 236 22 79 chr2 15192749 15192927 -235494927 + L1PA2 LINE L1 5988 6155 0 379 228 0 142 chr2 15193476 15193603 -235494251 - L2 LINE L2 -7 3306 3198 342 0 0 0 chr2 15193636 15193674 -235494180 + (CA)n Simple_repeat Simple_repeat 1 38 0 2255 58 51 7 chr2 15193787 15194079 -235493775 + AluY SINE Alu 1 305 -6 1958 106 73 0 chr2 15194153 15194428 -235493426 + AluY SINE Alu 1 295 -16 899 10 0 0 chr2 15194718 15194818 -235493036 - AluYa5/8 SINE Alu -7 303 204 1095 155 0 0 chr2 15194902 15195063 -235492791 - AluJb SINE Alu -18 294 134 5406 129 36 26 chr2 15195484 15196423 -235491431 - Tigger3b DNA MER2_type 0 1231 284 319 231 0 15 chr2 15196423 15196488 -235491366 - MER2 DNA MER2_type 0 345 282 * 442 287 0 0 chr2 15196463 15196557 -235491297 - MER8 DNA MER2_type -60 179 86 239 256 16 74 chr2 15197072 15197193 -235490661 - L1ME3 LINE L1 -8 6154 6041 1302 165 30 0 chr2 15197842 15198079 -235489775 + L1M4 LINE L1 5485 5728 -446 202 318 0 11 chr2 15199167 15199255 -235488599 + A-rich Low_complexity Low_complexity 4 90 0 480 285 66 41 chr2 15199395 15199788 -235488066 + HAL1b LINE L1 231 633 -715 1451 252 150 4 chr2 15200022 15200474 -235487380 - L2 LINE L2 -1405 1909 1392 196 240 0 20 chr2 15200677 15200727 -235487127 - MIR SINE MIR -55 207 159 542 179 5 122 chr2 15201657 15201853 -235486001 - L1MC4 LINE L1 -4 8038 7866 1739 103 4 0 chr2 15201855 15202089 -235485765 + AluSq SINE Alu 1 235 -78 217 211 18 18 chr2 15202405 15202462 -235485392 + MIR SINE MIR 98 154 -108 2394 73 0 0 chr2 15202992 15203281 -235484573 - AluSg SINE Alu -21 289 1 311 306 150 17 chr2 15203347 15203527 -235484327 + MLT1I LTR MaLR 3 206 -203 248 243 108 0 chr2 15203753 15203827 -235484027 + L2 LINE L2 3232 3313 0 578 249 76 35 chr2 15203870 15204067 -235483787 + MIR SINE MIR 48 252 -10 1844 187 70 41 chr2 15205545 15206004 -235481850 + MLT1D LTR MaLR 1 472 -33 288 263 17 25 chr2 15206615 15206733 -235481121 + L1MC5 LINE L1 7329 7445 -516 1566 194 10 17 chr2 15206840 15207129 -235480725 + AluJo SINE Alu 1 287 -25 1041 207 37 43 chr2 15207140 15207439 -235480415 + L1MC5 LINE L1 7617 7913 -48 34 84 0 0 chr2 15207771 15207854 -235480000 + AT_rich Low_complexity Low_complexity 1 83 0 231 287 81 11 chr2 15208275 15208362 -235479492 - L2 LINE L2 -23 3249 3157 530 146 125 0 chr2 15208496 15208592 -235479262 + AluJb SINE Alu 81 188 -124 368 179 51 0 chr2 15208592 15208670 -235479184 + AluS SINE Alu 221 302 0 320 267 109 63 chr2 15209215 15209436 -235478418 + L1ME LINE L1 4466 4696 -1450 2032 109 3 3 chr2 15209594 15209877 -235477977 + AluSx SINE Alu 21 303 -9 230 239 132 13 chr2 15209877 15210036 -235477818 + L1ME LINE L1 5212 5389 -757 227 284 31 0 chr2 15210085 15210157 -235477697 + L1ME LINE L1 5521 5586 -535 970 97 0 19 chr2 15210270 15210424 -235477430 - L1PA15 LINE L1 -1 6164 6014 1129 203 166 66 chr2 15210758 15211138 -235476716 - Tigger5 DNA MER2_type 0 2323 1 2281 115 25 27 chr2 15211804 15212169 -235475685 - THE1B LTR MaLR 0 364 1 1604 144 20 52 chr2 15212563 15212869 -235474985 - AluJb SINE Alu -7 305 10 463 143 13 0 chr2 15212876 15212953 -235474901 - MER5A DNA MER1_type -111 78 1 1544 212 0 14 chr2 15213253 15213550 -235474304 + AluJb SINE Alu 1 293 -19 1180 195 113 13 chr2 15213645 15213947 -235473907 - MER58B DNA MER1_type -1 340 9 245 337 163 12 chr2 15213986 15214152 -235473702 + MIR SINE MIR 66 256 -6 214 367 31 20 chr2 15214205 15214303 -235473551 - L2 LINE L2 -27 3245 3147 607 219 0 31 chr2 15214565 15214693 -235473161 - L2 LINE L2 -1 3312 3189 194 306 59 24 chr2 15214740 15214825 -235473029 - L2 LINE L2 0 3272 3185 982 207 32 18 chr2 15214899 15215116 -235472738 + MER58A DNA MER1_type 1 220 -4 442 359 141 23 chr2 15215118 15215773 -235472081 - L2 LINE L2 -433 2881 2150 1173 151 80 0 chr2 15215843 15216082 -235471772 - Tigger2 DNA MER2_type 0 2718 2461 1833 123 14 11 chr2 15216113 15216398 -235471456 - Tigger2 DNA MER2_type -1940 778 493 2229 140 9 3 chr2 15216398 15216740 -235471114 - MER2 DNA MER2_type 0 344 1 2006 142 0 0 chr2 15216765 15217079 -235470775 + AluSx SINE Alu 1 314 0 264 266 11 53 chr2 15217899 15217993 -235469861 + MER5B DNA MER1_type 89 178 0 367 318 8 32 chr2 15218490 15218616 -235469238 - MIR SINE MIR -70 138 16 21 0 0 0 chr2 15218616 15218637 -235469217 + AT_rich Low_complexity Low_complexity 1 21 0 253 236 0 0 chr2 15218657 15218712 -235469142 + L1MB7 LINE L1 6070 6124 -60 243 346 0 0 chr2 15220219 15220323 -235467531 + A-rich Low_complexity Low_complexity 1 104 0 206 267 56 67 chr2 15220374 15220464 -235467390 - L2 LINE L2 -41 3231 3143 1217 243 13 71 chr2 15220481 15220860 -235466994 - MLT1A1 LTR MaLR -8 357 1 373 174 41 6 chr2 15221474 15221646 -235466208 + (TA)n Simple_repeat Simple_repeat 1 178 0 2138 116 3 0 chr2 15221719 15222013 -235465841 + AluSx SINE Alu 1 295 -17 244 229 0 0 chr2 15222014 15222075 -235465779 + L1MC4 LINE L1 6652 6712 -1330 1792 162 26 0 chr2 15222351 15222654 -235465200 + AluJb SINE Alu 1 311 -1 28 0 0 0 chr2 15223186 15223214 -235464640 + AT_rich Low_complexity Low_complexity 1 28 0 253 257 71 7 chr2 15223460 15223600 -235464254 + L1MEd LINE L1 893 1041 -5078 1826 248 75 40 chr2 15223769 15224500 -235463354 + HAL1 LINE L1 1151 1907 -600 313 180 0 0 chr2 15224502 15224552 -235463302 + 5S rRNA rRNA 2 51 -70 282 225 54 18 chr2 15224592 15224703 -235463151 + HAL1 LINE L1 1954 2068 -439 1084 266 88 23 chr2 15224722 15225211 -235462643 + L2 LINE L2 2784 3313 0 482 270 74 47 chr2 15225293 15225344 -235462510 + HAL1 LINE L1 2108 2156 -351 2555 60 0 0 chr2 15225344 15225644 -235462210 + AluY SINE Alu 4 303 -8 482 270 74 47 chr2 15225644 15225888 -235461966 + HAL1 LINE L1 2156 2411 -96 23 54 0 0 chr2 15225943 15225980 -235461874 + AT_rich Low_complexity Low_complexity 1 37 0 1268 271 95 26 chr2 15226040 15226703 -235461151 + L1ME3 LINE L1 5258 5966 -196 483 18 0 0 chr2 15226807 15226863 -235460991 + (TG)n Simple_repeat Simple_repeat 2 57 0 256 276 213 8 chr2 15227309 15227436 -235460418 - MIR SINE MIR -6 256 104 2597 231 30 26 chr2 15227812 15228275 -235459579 + L1ME2 LINE L1 5429 5898 -266 1709 170 57 33 chr2 15228275 15228373 -235459481 + MER2 DNA MER2_type 1 95 -249 2181 112 0 3 chr2 15228373 15228720 -235459134 + AluY SINE Alu 1 311 0 1709 170 57 33 chr2 15228720 15228957 -235458897 + MER2 DNA MER2_type 95 344 0 2597 231 30 26 chr2 15228957 15229216 -235458638 + L1ME2 LINE L1 5898 6154 -10 331 320 84 39 chr2 15229255 15229458 -235458396 + L1MC4 LINE L1 7829 8040 -2 709 256 34 94 chr2 15230246 15230629 -235457225 + MER34 LTR ERV1 1 360 -182 342 233 9 8 chr2 15230629 15230857 -235456997 + AluJo SINE Alu 1 297 -5 564 200 37 63 chr2 15230859 15231049 -235456805 + MER34 LTR ERV1 353 537 -5 909 194 36 16 chr2 15231092 15231339 -235456515 + MER33 DNA MER1_type 45 296 -28 614 190 15 103 chr2 15231533 15231728 -235456126 + MER5B DNA MER1_type 1 178 0 255 103 0 0 chr2 15232991 15233030 -235454824 + (CA)n Simple_repeat Simple_repeat 2 40 0 235 303 79 0 chr2 15233127 15233203 -235454651 - L2 LINE L2 -1882 1432 1351 259 346 99 49 chr2 15233460 15233784 -235454070 + L2 LINE L2 2523 2862 -452 2334 97 3 6 chr2 15233846 15234157 -235453697 - AluSx SINE Alu -2 310 1 244 293 186 55 chr2 15234166 15234419 -235453435 + L2 LINE L2 2933 3218 -54 300 226 39 122 chr2 15234688 15234869 -235452985 + L1MC4 LINE L1 7864 8029 -13 349 206 71 52 chr2 15238326 15238481 -235449373 - L1MC4 LINE L1 -2 8040 7883 24 67 0 0 chr2 15239773 15239818 -235448036 + AT_rich Low_complexity Low_complexity 1 45 0 1829 129 0 63 chr2 15240734 15241093 -235446761 - AluJb SINE Alu 0 312 1 354 303 121 12 chr2 15241588 15241753 -235446101 - MIR3 SINE MIR -17 191 9 275 262 0 0 chr2 15242132 15242193 -235445661 + MLT1J LTR MaLR 148 208 -303 975 200 0 0 chr2 15243058 15243238 -235444616 - AluJb SINE Alu -2 310 131 226 235 20 0 chr2 15243324 15243375 -235444479 - L1ME4a LINE L1 -92 6029 5978 326 349 125 0 chr2 15243733 15243925 -235443929 - L1ME4a LINE L1 -391 5730 5515 343 255 10 39 chr2 15244797 15244899 -235442955 - MER5A DNA MER1_type -90 99 1 637 228 111 19 chr2 15245073 15245235 -235442619 - MER5B DNA MER1_type -1 177 1 240 257 50 50 chr2 15245486 15245587 -235442267 - MARNA DNA Mariner -73 513 413 803 276 49 11 chr2 15247794 15248049 -235439805 - MIR SINE MIR 0 262 3 241 206 29 73 chr2 15248211 15248279 -235439575 - MIR SINE MIR -55 153 89 2228 130 0 6 chr2 15248287 15248602 -235439252 - AluSq SINE Alu 0 313 1 2069 150 0 13 chr2 15248729 15249043 -235438811 - AluJo SINE Alu -2 310 1 199 284 68 14 chr2 15249942 15250016 -235437838 + L2 LINE L2 3187 3264 -8 981 224 29 4 chr2 15250420 15250665 -235437189 + L1M4 LINE L1 2479 2729 -3417 1791 208 7 14 chr2 15250668 15251105 -235436749 + L1M4 LINE L1 2813 3246 -2900 307 281 0 12 chr2 15251106 15251188 -235436666 - MIR SINE MIR -150 112 32 435 265 52 22 chr2 15251197 15251333 -235436521 + L2 LINE L2 3132 3271 -1 228 202 67 45 chr2 15252936 15253025 -235434829 - MLT1J LTR MaLR -5 506 416 673 269 34 99 chr2 15253079 15253522 -235434332 - MLT1J LTR MaLR -93 418 5 450 290 99 59 chr2 15253599 15253871 -235433983 - L2 LINE L2 0 3272 2990 745 246 194 52 chr2 15254039 15254543 -235433311 - MLT1K LTR MaLR -11 577 2 328 289 67 30 chr2 15254586 15254721 -235433133 - MIR3 SINE MIR -68 140 1 1389 159 133 30 chr2 15254848 15255118 -235432736 + AluJb SINE Alu 1 298 -14 2382 96 0 0 chr2 15255585 15255888 -235431966 - AluSx SINE Alu -9 303 1 2582 170 42 0 chr2 15255918 15256419 -235431435 + L1MB3 LINE L1 5622 6143 -40 2283 112 0 3 chr2 15256419 15256724 -235431130 - AluSx SINE Alu -8 304 1 521 118 12 0 chr2 15257056 15257141 -235430713 + L1MB8 LINE L1 6087 6172 -6 1633 184 8 15 chr2 15257480 15257747 -235430107 + AluJb SINE Alu 2 266 -46 838 26 26 52 chr2 15257774 15257928 -235429926 + (GGAA)n Simple_repeat Simple_repeat 3 152 0 1025 161 0 0 chr2 15258432 15258587 -235429267 + AluSg/x SINE Alu 132 286 -24 493 293 138 39 chr2 15259413 15259696 -235428158 - L3 LINE CR1 -281 1296 986 2011 149 10 7 chr2 15260711 15261013 -235426841 - AluSx SINE Alu -9 303 1 2474 73 0 22 chr2 15261013 15261326 -235426528 - AluY SINE Alu -5 306 1 23 0 0 0 chr2 15261336 15261359 -235426495 + AT_rich Low_complexity Low_complexity 1 23 0 448 307 81 20 chr2 15261857 15262095 -235425759 - MIR SINE MIR -9 253 3 320 312 122 21 chr2 15262550 15262739 -235425115 + MIR SINE MIR 34 241 -21 325 366 18 6 chr2 15264826 15264990 -235422864 - L2 LINE L2 -559 2755 2590 436 296 2 15 chr2 15265148 15265323 -235422531 + MER5A DNA MER1_type 7 178 0 248 274 142 18 chr2 15265362 15265475 -235422379 + L2 LINE L2 3144 3270 -2 746 248 50 0 chr2 15266234 15266432 -235421422 - MER3 DNA MER1_type 0 209 2 2002 123 0 14 chr2 15266599 15266915 -235420939 + AluY SINE Alu 1 312 0 393 218 18 55 chr2 15267489 15267599 -235420255 - LTR67 LTR ERVL -449 108 3 1193 340 45 56 chr2 15267631 15268626 -235419228 + L2 LINE L2 2242 3225 -47 606 297 37 37 chr2 15268650 15268892 -235418962 + MIR SINE MIR 20 261 -1 1063 254 28 20 chr2 15269072 15269324 -235418530 - MIR SINE MIR -8 254 1 422 249 67 83 chr2 15269424 15269617 -235418237 + L1ME4a LINE L1 5930 6119 -2 861 258 18 28 chr2 15270130 15270347 -235417507 - MIR SINE MIR -41 221 7 225 342 88 44 chr2 15270865 15270979 -235416875 - L3b LINE CR1 -24 1559 1441 2294 82 0 10 chr2 15272243 15272535 -235415319 - AluY SINE Alu -8 303 15 180 282 56 28 chr2 15272750 15272821 -235415033 + MIR SINE MIR 118 190 -72 2211 207 104 4 chr2 15272967 15273514 -235414340 + L1MB5 LINE L1 5573 6174 0 214 341 76 8 chr2 15275645 15275806 -235412048 - MIR SINE MIR -50 212 40 440 218 99 10 chr2 15276028 15276129 -235411725 - L2 LINE L2 0 3313 3204 224 179 71 18 chr2 15276123 15276179 -235411675 + MIR SINE MIR 199 257 -5 * 193 392 40 20 chr2 15277407 15277606 -235410248 - L2 LINE L2 -244 3028 2826 207 0 0 0 chr2 15279037 15279060 -235408794 + (T)n Simple_repeat Simple_repeat 1 23 0 2487 82 0 13 chr2 15279078 15279393 -235408461 - AluY SINE Alu 0 311 1 2674 148 19 2 chr2 15279395 15279862 -235407992 - L1M3 LINE L1 -345 5823 5349 311 286 67 9 chr2 15279863 15279968 -235407886 - MIR3 SINE MIR -88 120 10 286 277 40 113 chr2 15280517 15280694 -235407160 + MIR SINE MIR 5 168 -40 212 232 18 36 chr2 15280715 15280771 -235407083 - L2 LINE L2 -14 3299 3245 1855 207 72 59 chr2 15280862 15280908 -235406946 + MLT1F LTR MaLR 1 45 -497 2382 100 3 0 chr2 15280908 15281208 -235406646 - AluSp SINE Alu -12 301 1 1855 207 72 59 chr2 15281208 15281687 -235406167 + MLT1F LTR MaLR 45 533 -9 196 330 17 42 chr2 15282335 15282453 -235405401 - L2 LINE L2 -477 2837 2723 296 311 52 37 chr2 15282725 15282860 -235404994 + MIR SINE MIR 35 171 -91 1506 192 32 3 chr2 15283355 15283667 -235404187 + L1MB8 LINE L1 5852 6172 -6 287 294 49 10 chr2 15283773 15283875 -235403979 - MIR3 SINE MIR -43 165 60 437 305 29 29 chr2 15284241 15284415 -235403439 - MIR3 SINE MIR -23 185 12 333 307 158 8 chr2 15284824 15284951 -235402903 + MIR SINE MIR 47 192 -70 2110 127 7 0 chr2 15285255 15285547 -235402307 - AluSq SINE Alu -19 294 1 2293 107 24 0 chr2 15285994 15286292 -235401562 + AluSx SINE Alu 1 305 -7 286 328 40 56 chr2 15286512 15286637 -235401217 - MIR SINE MIR -66 142 20 840 250 29 41 chr2 15287233 15287477 -235400377 + MIR SINE MIR 22 262 0 1981 66 0 59 chr2 15287723 15288056 -235399798 + L1PA7 LINE L1 5867 6182 0 355 278 8 24 chr2 15288170 15288296 -235399558 + MLT1I LTR MaLR 25 148 -261 619 255 98 0 chr2 15288347 15288500 -235399354 - MER58B DNA MER1_type 0 341 174 418 211 17 51 chr2 15288512 15288634 -235399220 + MER3 DNA MER1_type 6 2335 0 560 245 92 0 chr2 15288645 15288808 -235399046 + MLT1I LTR MaLR 232 409 0 315 372 11 21 chr2 15288808 15288996 -235398858 + L2 LINE L2 2864 3049 -223 5825 59 22 16 chr2 15289068 15290282 -235397572 - SVA Other Other -520 1047 1 2044 178 51 12 chr2 15291229 15291639 -235396215 + MSTB1 LTR MaLR 7 432 0 26 50 0 0 chr2 15293009 15293049 -235394805 + AT_rich Low_complexity Low_complexity 1 40 0 270 305 51 11 chr2 15293510 15293627 -235394227 + MIR SINE MIR 74 193 -42 279 244 100 0 chr2 15293654 15293744 -235394110 - L2 LINE L2 -264 3008 2910 787 207 7 0 chr2 15294593 15294738 -235393116 - MLT1G1 LTR MaLR 0 595 450 2191 75 0 0 chr2 15294775 15295041 -235392813 + AluY SINE Alu 33 298 -13 1113 223 9 0 chr2 15295175 15295395 -235392459 - AluJo SINE Alu 0 312 91 500 326 36 36 chr2 15295410 15295717 -235392137 - MLT1G1-int LTR MaLR -821 550 244 793 280 206 3 chr2 15295798 15296094 -235391760 - MLT1G1 LTR MaLR 0 595 240 351 226 274 0 chr2 15296134 15296258 -235391596 - MLT1G1 LTR MaLR -437 158 1 341 154 0 0 chr2 15296304 15296356 -235391498 + Alu SINE Alu 1 52 -247 * 636 243 26 7 chr2 15296317 15296469 -235391385 + MLT1E3 LTR MaLR 464 618 -6 875 248 28 83 chr2 15296470 15296857 -235390997 - MLT1B LTR MaLR -2 388 23 310 378 24 19 chr2 15297285 15297494 -235390360 - MIR SINE MIR -36 226 17 183 319 44 11 chr2 15298333 15298424 -235389430 - L2 LINE L2 -42 3230 3137 208 325 72 0 chr2 15298578 15298661 -235389193 - MIR SINE MIR -78 184 96 2388 79 0 13 chr2 15299414 15299719 -235388135 + AluSx SINE Alu 6 306 -6 1021 284 107 28 chr2 15300076 15300498 -235387356 - MER115 DNA AcHobo -238 455 1 232 196 107 0 chr2 15300718 15300774 -235387080 + MIR SINE MIR 68 129 -133 182 295 51 13 chr2 15301739 15301817 -235386037 + MIR SINE MIR 148 228 -34 602 196 0 0 chr2 15302256 15302358 -235385496 + FLAM_A SINE Alu 20 121 -21 362 62 297 0 chr2 15302662 15302771 -235385083 + AluSc SINE Alu 196 323 0 2332 172 21 13 chr2 15302786 15303263 -235384591 + L1MC1 LINE L1 5840 6320 -13 249 338 70 7 chr2 15303828 15303970 -235383884 - L2 LINE L2 -1 3312 3162 215 348 11 0 chr2 15304221 15304310 -235383544 - L2 LINE L2 -489 2825 2736 351 65 0 0 chr2 15304854 15304900 -235382954 + (TG)n Simple_repeat Simple_repeat 2 47 0 1467 110 18 5 chr2 15305074 15305292 -235382562 - pTR5 LTR ERV1 -2046 392 172 258 296 10 0 chr2 15305295 15305393 -235382461 - LTR30 LTR ERV1 -80 642 544 4520 112 26 35 chr2 15305397 15306476 -235381378 - pTR5 LTR ERV1 -417 2021 743 1645 132 8 0 chr2 15306580 15306831 -235381023 - L1PB3 LINE L1 -9 6145 5893 37 0 0 0 chr2 15306837 15306874 -235380980 + AT_rich Low_complexity Low_complexity 1 37 0 2145 70 3 54 chr2 15307074 15307423 -235380431 + AluY SINE Alu 1 334 0 209 310 28 0 chr2 15308330 15308401 -235379453 - MIR SINE MIR -89 119 47 487 276 23 35 chr2 15308429 15308603 -235379251 + MLT1L LTR MaLR 28 199 -416 5478 90 6 1 chr2 15308603 15309380 -235378474 - L1PA8 LINE L1 -14 6158 5378 1115 221 62 96 chr2 15309399 15309816 -235378038 + MLT1L LTR MaLR 196 598 -17 321 277 86 106 chr2 15309856 15310195 -235377659 + L2 LINE L2 2927 3258 -14 269 230 195 0 chr2 15310523 15310610 -235377244 + MIR SINE MIR 42 145 -63 4267 116 45 17 chr2 15310663 15311354 -235376500 - MER50 LTR ERV1 -24 710 1 940 194 6 6 chr2 15311497 15311667 -235376187 - FRAM SINE Alu -11 165 1 2171 207 62 40 chr2 15311721 15312210 -235375644 + MER74A LTR ERVL 16 519 -39 2563 87 3 8 chr2 15312210 15312567 -235375287 - THE1A LTR MaLR 0 355 1 2171 207 62 40 chr2 15312567 15312608 -235375246 + MER74A LTR ERVL 519 558 0 185 374 136 4 chr2 15314190 15314463 -235373391 + L2 LINE L2 2446 2754 -560 2061 212 26 11 chr2 15314625 15315078 -235372776 - MLT1C LTR MaLR -7 460 1 423 299 88 0 chr2 15315215 15315352 -235372502 + L2 LINE L2 3124 3272 0 191 306 108 25 chr2 15315422 15315579 -235372275 + L2 LINE L2 2623 2792 -522 260 265 60 0 chr2 15315590 15315673 -235372181 + L1ME LINE L1 5756 5843 -278 2378 160 29 47 chr2 15315689 15316139 -235371715 - MLT2B2 LTR ERVL -73 442 1 1998 216 58 11 chr2 15316407 15316869 -235370985 + MLT1E2 LTR MaLR 143 626 0 1830 161 48 7 chr2 15316884 15317176 -235370678 - AluJb SINE Alu -8 304 1 229 280 30 113 chr2 15317483 15317651 -235370203 - MIR SINE MIR -74 188 35 248 200 15 15 chr2 15319887 15319952 -235367902 - MLT2B2 LTR ERVL 0 515 451 2955 3 0 0 chr2 15320012 15320321 -235367533 - AluYa5 SINE Alu -2 309 1 195 365 19 9 chr2 15320729 15320836 -235367018 - L2 LINE L2 -286 2986 2879 2551 37 44 0 chr2 15321155 15321450 -235366404 + AluY SINE Alu 1 308 -3 309 312 38 32 chr2 15321485 15321642 -235366212 - L2 LINE L2 -814 2500 2343 365 320 124 36 chr2 15322515 15322903 -235364951 - L1ME3 LINE L1 -296 5866 5445 388 286 40 8 chr2 15323027 15323153 -235364701 - MIR SINE MIR -2 260 131 316 282 53 30 chr2 15323615 15323746 -235364108 + LTR67 LTR ERVL 424 557 0 1790 142 126 0 chr2 15323974 15324292 -235363562 - THE1B LTR MaLR -2 362 5 1890 175 7 0 chr2 15324409 15324717 -235363137 - AluJo SINE Alu -2 310 1 258 286 61 10 chr2 15324959 15325057 -235362797 + L2 LINE L2 3136 3238 -34 317 339 69 0 chr2 15325201 15325331 -235362523 - L2 LINE L2 -13 3259 3121 279 323 24 24 chr2 15325556 15325683 -235362171 - L2 LINE L2 -14 3258 3132 1896 157 10 0 chr2 15325690 15325990 -235361864 - AluJo SINE Alu -9 303 1 181 185 37 93 chr2 15326087 15326141 -235361713 - L2 LINE L2 0 3313 3263 269 368 125 32 chr2 15327033 15327313 -235360541 - L2 LINE L2 -49 3223 2918 529 315 208 16 chr2 15328564 15329117 -235358737 - L3 LINE CR1 -16 1561 903 314 279 48 108 chr2 15329417 15329470 -235358384 - L3 LINE CR1 -1083 494 439 2008 151 0 3 chr2 15329470 15329787 -235358067 - AluSx SINE Alu 0 312 1 314 279 48 108 chr2 15329787 15329984 -235357870 - L3 LINE CR1 -1138 439 259 1675 140 81 31 chr2 15330041 15330398 -235357456 + THE1C LTR MaLR 1 375 0 402 266 37 0 chr2 15330672 15330781 -235357073 + MER94 DNA DNA 1 113 -21 192 232 7 162 chr2 15331229 15331371 -235356483 - MIR3 SINE MIR -3 205 86 219 361 31 8 chr2 15331844 15332013 -235355841 + MIR SINE MIR 88 262 0 684 201 88 34 chr2 15332031 15332235 -235355619 - MER20 DNA MER1_type -3 216 2 305 300 107 27 chr2 15332274 15332424 -235355430 + MIR SINE MIR 6 167 -95 2426 64 0 3 chr2 15332706 15333002 -235354852 - AluY SINE Alu -14 297 3 290 270 133 0 chr2 15333123 15333272 -235354582 - MIR SINE MIR -65 143 23 218 297 8 51 chr2 15333338 15333368 -235354486 + GA-rich Low_complexity Low_complexity 5 35 -82 2004 172 21 3 chr2 15333368 15333751 -235354103 - MLT1B LTR MaLR 0 390 1 218 297 8 51 chr2 15333751 15333838 -235354016 + GA-rich Low_complexity Low_complexity 35 117 0 210 257 29 0 chr2 15334443 15334513 -235353341 - MIR SINE MIR -56 152 81 1260 243 23 32 chr2 15334998 15335344 -235352510 - MLT1C LTR MaLR 0 467 125 425 310 103 59 chr2 15336313 15336414 -235351440 - L2 LINE L2 -2 3311 3216 2361 87 7 0 chr2 15336414 15336703 -235351151 + AluSc SINE Alu 3 293 -16 425 310 103 59 chr2 15336703 15336940 -235350914 - L2 LINE L2 -97 3216 2958 1352 57 119 0 chr2 15337033 15337227 -235350627 + MER30 DNA MER1_type 14 230 0 303 261 34 0 chr2 15338254 15338342 -235349512 - MIR SINE MIR -71 137 47 186 305 17 85 chr2 15338654 15338831 -235349023 + L3 LINE CR1 774 938 -639 936 120 8 15 chr2 15338835 15338968 -235348886 - AluSq/x SINE Alu -181 132 1 521 338 71 11 chr2 15338984 15339253 -235348601 + L3 LINE CR1 938 1222 -355 189 356 81 0 chr2 15339352 15339439 -235348415 + L3 LINE CR1 1417 1510 -67 611 215 246 0 chr2 15339454 15339649 -235348205 - MIR SINE MIR 0 262 20 180 311 14 40 chr2 15339645 15339719 -235348135 + L3 LINE CR1 1504 1575 -2 * 252 286 51 0 chr2 15340537 15340635 -235347219 + L2 LINE L2 2946 3048 -224 201 74 0 0 chr2 15341444 15341471 -235346383 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 188 286 0 20 chr2 15341862 15341911 -235345943 - MIR SINE MIR -89 173 126 2171 104 27 7 chr2 15342240 15342537 -235345317 - AluSg SINE Alu -7 303 1 425 273 43 2 chr2 15343082 15343281 -235344573 - MIR SINE MIR -7 255 5 235 323 177 25 chr2 15344016 15344174 -235343680 - MIR SINE MIR -15 247 66 444 317 51 40 chr2 15344619 15344945 -235342909 + L2 LINE L2 2555 2886 -428 303 260 0 13 chr2 15345001 15345078 -235342776 + L2 LINE L2 2894 2969 -303 208 0 0 0 chr2 15345446 15345469 -235342385 + (TTTA)n Simple_repeat Simple_repeat 2 108 0 1872 139 18 4 chr2 15345469 15345749 -235342105 - AluSx SINE Alu -28 284 1 247 319 11 43 chr2 15345763 15345857 -235341997 - MIR SINE MIR -164 98 8 498 244 208 25 chr2 15346422 15346696 -235341158 + MLT1J2 LTR MaLR 1 324 -126 395 253 12 0 chr2 15346714 15346797 -235341057 + L2 LINE L2 3189 3272 0 181 307 188 0 chr2 15346827 15346928 -235340926 - MIR SINE MIR -72 190 71 269 320 34 54 chr2 15347088 15347235 -235340619 + MER5A DNA MER1_type 18 161 -28 * 426 340 27 7 chr2 15347109 15347259 -235340595 - MER5B DNA MER1_type -22 156 4 602 293 44 0 chr2 15347271 15347452 -235340402 + MIR SINE MIR 20 208 -54 981 261 80 3 chr2 15347780 15348094 -235339760 - L1MD2 LINE L1 -205 6154 5817 1038 93 7 0 chr2 15348100 15348240 -235339614 - AluSg/x SINE Alu -2 310 170 1790 218 107 6 chr2 15348242 15348710 -235339144 - L1ME1 LINE L1 -340 5826 5312 2498 241 43 30 chr2 15348731 15349700 -235338154 - L1ME1 LINE L1 -5 6095 5109 1270 233 167 12 chr2 15349704 15350124 -235337730 - L1MD2 LINE L1 -10 6349 5865 562 117 47 39 chr2 15350130 15350258 -235337596 - L1MDa LINE L1 -3922 2618 2490 * 1267 170 26 26 chr2 15350241 15350552 -235337302 - L1MDa LINE L1 -4375 2165 1855 * 2070 237 94 16 chr2 15350551 15351047 -235336807 - L1ME1 LINE L1 -1054 5026 4570 1036 203 85 42 chr2 15351047 15351377 -235336477 + MER2 DNA MER2_type 1 344 0 2070 237 94 16 chr2 15351377 15351712 -235336142 - L1ME1 LINE L1 -1510 4570 3977 895 201 6 0 chr2 15351712 15351876 -235335978 - MLT1E LTR MaLR 0 593 429 255 191 0 0 chr2 15351876 15351918 -235335936 + AluSp SINE Alu 136 177 -126 1731 191 26 0 chr2 15351998 15352302 -235335552 - AluJo SINE Alu 0 312 1 4044 246 20 25 chr2 15352304 15353631 -235334223 - L1ME1 LINE L1 -2299 3781 2462 300 253 42 42 chr2 15353624 15353719 -235334135 - L1ME1 LINE L1 -5970 100 6 * 198 345 95 0 chr2 15354285 15354401 -235333453 - MIR3 SINE MIR -69 139 13 751 295 0 20 chr2 15354810 15355010 -235332844 - MIR SINE MIR 0 262 67 511 308 133 56 chr2 15355657 15355979 -235331875 + L2 LINE L2 2926 3272 0 341 256 53 6 chr2 15356193 15356324 -235331530 - MIR SINE MIR -9 199 58 277 224 0 66 chr2 15357601 15357677 -235330177 - MIR SINE MIR -100 108 38 290 241 36 24 chr2 15357714 15357797 -235330057 + MIR3 SINE MIR 110 193 -15 297 235 139 12 chr2 15358004 15358122 -235329732 + MIR SINE MIR 54 182 -68 411 277 62 15 chr2 15358479 15358609 -235329245 - MIR SINE MIR -70 192 57 194 321 36 0 chr2 15358820 15358876 -235328978 - L2 LINE L2 0 3272 3215 525 270 56 42 chr2 15359538 15359753 -235328101 + MIR SINE MIR 13 230 -32 400 323 214 5 chr2 15359893 15360085 -235327769 - L3 LINE CR1 -8 1569 1338 251 333 82 0 chr2 15360448 15360605 -235327249 + MIR SINE MIR 1 171 -37 285 159 159 0 chr2 15362318 15362381 -235325473 + L1MC1 LINE L1 6259 6331 -2 424 329 7 0 chr2 15362484 15362621 -235325233 + MIR SINE MIR 109 246 -16 185 354 31 31 chr2 15363743 15363873 -235323981 - MIR3 SINE MIR -76 132 3 257 298 85 21 chr2 15364399 15364493 -235323361 + MIR3 SINE MIR 60 159 -49 194 343 125 28 chr2 15364661 15364877 -235322977 - L2 LINE L2 -337 2977 2741 186 189 0 0 chr2 15364901 15364938 -235322916 + (TAA)n Simple_repeat Simple_repeat 2 38 0 1122 198 28 32 chr2 15364970 15365222 -235322632 + MLT1A1 LTR MaLR 115 365 0 237 245 98 98 chr2 15365486 15365690 -235322164 + L2 LINE L2 2507 2710 -604 3687 160 26 75 chr2 15365692 15366565 -235321289 + L1MB5 LINE L1 5344 6174 0 1197 271 89 19 chr2 15366623 15367188 -235320666 + L2 LINE L2 2703 3313 0 226 284 0 15 chr2 15367321 15367388 -235320466 + MIR SINE MIR 173 238 -24 1767 181 10 44 chr2 15367552 15367939 -235319915 + MLT1B LTR MaLR 6 379 -11 266 0 29 0 chr2 15368487 15368521 -235319333 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1493 218 68 2 chr2 15368574 15368969 -235318885 + MER97a DNA MER1_type? 243 663 -231 1635 142 84 18 chr2 15368969 15369244 -235318610 - AluJb SINE Alu -13 299 7 381 226 43 34 chr2 15369250 15369309 -235318545 + MER97b DNA MER1_type? 725 782 -271 627 149 0 26 chr2 15369309 15369423 -235318431 + L1MA3 LINE L1 6195 6305 0 381 226 43 34 chr2 15369423 15369532 -235318322 + MER97b DNA MER1_type? 782 1051 -2 294 357 24 0 chr2 15369748 15369874 -235317980 + MIR3 SINE MIR 52 180 -28 272 294 106 44 chr2 15371010 15371190 -235316664 - MIR SINE MIR -33 229 39 2508 112 3 32 chr2 15371278 15371653 -235316201 + THE1B LTR MaLR 1 364 0 363 283 30 41 chr2 15372306 15372487 -235315367 - MIR SINE MIR -63 145 16 381 272 169 42 chr2 15373120 15373333 -235314521 + MIR SINE MIR 12 251 -11 391 229 77 77 chr2 15373458 15373628 -235314226 - MIR3 SINE MIR -32 176 7 221 245 230 0 chr2 15373716 15373826 -235314028 + MIR SINE MIR 45 190 -56 477 318 35 12 chr2 15373993 15374166 -235313688 + MIR3 SINE MIR 15 191 -17 201 333 28 9 chr2 15375377 15375485 -235312369 + MIR SINE MIR 38 147 -61 187 295 172 0 chr2 15376168 15376290 -235311564 + MIR3 SINE MIR 10 152 -56 259 341 91 0 chr2 15376364 15376496 -235311358 + MIR SINE MIR 48 191 -71 2262 101 0 46 chr2 15376584 15376911 -235310943 + AluSq SINE Alu 1 312 -1 182 254 141 45 chr2 15376967 15377144 -235310710 + L2 LINE L2 2760 2953 -361 304 235 15 0 chr2 15377170 15377238 -235310616 + MER81 DNA DNA 26 94 -20 396 248 31 16 chr2 15377339 15377468 -235310386 + L2 LINE L2 3102 3232 -81 277 306 149 15 chr2 15377490 15377624 -235310230 - MIR SINE MIR -77 185 34 211 315 43 11 chr2 15377652 15377744 -235310110 + L2 LINE L2 3219 3313 0 464 302 23 17 chr2 15378535 15378707 -235309147 - MIR SINE MIR -43 219 47 279 244 61 12 chr2 15378780 15378862 -235308992 - MIR3 SINE MIR -21 187 102 212 317 77 0 chr2 15381274 15381378 -235306476 + MIR3 SINE MIR 82 193 -15 1193 249 12 15 chr2 15382092 15382429 -235305425 + L1ME2 LINE L1 5820 6155 -9 1939 179 97 2 chr2 15382442 15382873 -235304981 + L1MB8 LINE L1 5707 6178 0 225 273 168 28 chr2 15383099 15383242 -235304612 + MIR SINE MIR 97 259 -3 * 229 328 26 35 chr2 15383232 15383348 -235304506 - MIR SINE MIR -102 160 46 1951 162 14 14 chr2 15383615 15383655 -235304199 + MLT1A1 LTR MaLR 1 40 -325 7539 38 2 0 chr2 15383655 15385007 -235302847 - L1PA4 LINE L1 0 6155 4803 1951 162 14 14 chr2 15385007 15385331 -235302523 + MLT1A1 LTR MaLR 39 365 0 2145 161 36 0 chr2 15386197 15386588 -235301266 - L1MB3 LINE L1 -10 6173 5769 197 298 35 0 chr2 15386610 15386667 -235301187 - L2 LINE L2 -31 3282 3224 2104 127 0 0 chr2 15387350 15387683 -235300171 - AluSx SINE Alu 0 333 1 1808 176 3 3 chr2 15388040 15388342 -235299512 + AluJo SINE Alu 5 306 -6 1936 154 3 0 chr2 15388397 15388716 -235299138 - AluSx SINE Alu 0 320 1 726 133 4 16 chr2 15390140 15390397 -235297457 + (TG)n Simple_repeat Simple_repeat 1 254 0 265 273 91 30 chr2 15390737 15390836 -235297018 - L2 LINE L2 0 3313 3209 352 254 54 39 chr2 15391918 15392048 -235295806 - L3 LINE CR1 -47 1530 1399 499 196 92 49 chr2 15392271 15392456 -235295398 - MIR3 SINE MIR -57 151 7 505 282 107 29 chr2 15395210 15395416 -235292438 - MIR SINE MIR -20 242 21 494 322 65 15 chr2 15395384 15395583 -235292271 + MIR SINE MIR 37 245 -17 * 812 253 93 4 chr2 15395733 15395800 -235292054 - MIR SINE MIR -5 257 197 2175 124 0 0 chr2 15395800 15396098 -235291756 - AluSx SINE Alu -14 298 1 812 253 93 4 chr2 15396098 15396255 -235291599 - MIR SINE MIR -65 197 13 445 248 28 28 chr2 15396286 15396431 -235291423 + L2 LINE L2 3169 3313 0 673 117 36 0 chr2 15396822 15396959 -235290895 + (TCCA)n Simple_repeat Simple_repeat 3 144 0 633 149 37 0 chr2 15396987 15397148 -235290706 + (TCCA)n Simple_repeat Simple_repeat 4 170 0 29 0 0 0 chr2 15448233 15448262 -235239592 + AT_rich Low_complexity Low_complexity 1 29 0 221 165 108 108 chr2 15448546 15448629 -235239225 - MIR SINE MIR -63 145 66 2179 106 7 0 chr2 15449159 15449460 -235238394 - AluSp SINE Alu -10 303 1 2167 98 3 16 chr2 15450279 15450586 -235237268 + AluSx SINE Alu 1 303 -9 306 0 0 0 chr2 15450714 15450748 -235237106 + (TA)n Simple_repeat Simple_repeat 1 34 0 247 237 0 144 chr2 15451978 15452053 -235235801 - L3 LINE CR1 -16 1561 1507 2033 189 45 13 chr2 15452053 15452502 -235235352 - MLT1C LTR MaLR -1 466 4 247 237 0 144 chr2 15452502 15452544 -235235310 - L3 LINE CR1 -70 1507 1461 318 318 0 0 chr2 15452631 15452719 -235235135 - L2 LINE L2 -1 3312 3225 376 247 0 0 chr2 15452878 15452959 -235234895 + MER94 DNA DNA 2 82 -52 184 276 43 69 chr2 15452979 15453095 -235234759 - L3 LINE CR1 -386 1191 1079 267 322 54 13 chr2 15454780 15454929 -235232925 - MIR3 SINE MIR -43 165 11 1483 153 58 0 chr2 15455293 15455534 -235232320 + AluSq SINE Alu 1 255 -58 1636 171 10 3 chr2 15455576 15455868 -235231986 - AluJo SINE Alu -18 294 1 191 315 39 46 chr2 15456043 15456173 -235231681 - MIR SINE MIR -57 205 77 220 309 85 11 chr2 15456190 15456284 -235231570 - MIR SINE MIR -26 236 136 1008 259 36 68 chr2 15456294 15456870 -235230984 + L1MC4a LINE L1 4637 5194 -952 7265 53 2 1 chr2 15456928 15457926 -235229928 + L1PA6 LINE L1 5158 6154 0 287 257 0 0 chr2 15457951 15458025 -235229829 + L1MC4a LINE L1 5368 5441 -733 39 0 0 0 chr2 15458036 15458075 -235229779 + AT_rich Low_complexity Low_complexity 1 39 0 873 283 99 27 chr2 15458075 15458487 -235229367 + L1ME3 LINE L1 5374 5834 -328 1954 93 62 0 chr2 15458487 15458777 -235229077 + AluSx SINE Alu 1 308 -4 873 283 99 27 chr2 15458777 15458887 -235228967 + L1ME3 LINE L1 5834 5935 -227 322 279 50 35 chr2 15459067 15459268 -235228586 + L1MC4a LINE L1 5683 5886 -1922 237 265 137 51 chr2 15460187 15460304 -235227550 + L2 LINE L2 3129 3255 -17 269 279 38 0 chr2 15460392 15460471 -235227383 + ORSL DNA AcHobo 1 82 -193 2019 113 24 3 chr2 15460471 15460764 -235227090 + AluSx SINE Alu 1 299 -13 234 216 39 0 chr2 15460764 15460815 -235227039 + ORSL DNA AcHobo 221 273 -2 2263 107 0 0 chr2 15461081 15461390 -235226464 - AluSx SINE Alu -3 309 1 243 372 110 28 chr2 15461414 15461704 -235226150 - L2 LINE L2 -784 2530 2217 2020 141 0 0 chr2 15462353 15462652 -235225202 + AluSx SINE Alu 1 299 -13 1935 132 4 0 chr2 15462669 15462977 -235224877 + AluSx SINE Alu 1 309 0 708 349 48 14 chr2 15462979 15463274 -235224580 - L3 LINE CR1 -21 1556 1252 2138 115 0 7 chr2 15463435 15463739 -235224115 + AluSg SINE Alu 1 302 -8 630 226 194 5 chr2 15464027 15464213 -235223641 + MIR SINE MIR 30 250 -12 2059 101 21 3 chr2 15464675 15464961 -235222893 - AluSx SINE Alu -21 291 1 386 318 40 0 chr2 15465628 15465754 -235222100 + MIR3 SINE MIR 72 202 -6 1781 139 0 7 chr2 15466320 15466608 -235221246 + AluJb SINE Alu 26 311 -1 2251 91 7 3 chr2 15467180 15467487 -235220367 - AluSc SINE Alu -1 308 1 1336 265 79 36 chr2 15467852 15468483 -235219371 + HAL1 LINE L1 1083 1740 -767 1999 186 28 0 chr2 15468507 15468862 -235218992 - MLT1A1 LTR MaLR 0 365 1 944 288 43 29 chr2 15468928 15469234 -235218620 - MLT1I LTR MaLR -57 352 57 504 296 84 47 chr2 15469264 15469670 -235218184 + HAL1 LINE L1 1823 2243 -264 1618 171 7 30 chr2 15469782 15470086 -235217768 + AluJo SINE Alu 1 297 -15 369 267 68 62 chr2 15470873 15470910 -235216944 + L1ME4a LINE L1 5762 5797 -324 2247 99 0 0 chr2 15470910 15471212 -235216642 - AluSx SINE Alu -9 303 2 369 267 68 62 chr2 15471212 15471320 -235216534 + L1ME4a LINE L1 5797 5908 -213 513 264 16 8 chr2 15471476 15471597 -235216257 + MIR3 SINE MIR 38 159 -49 2174 73 0 3 chr2 15472375 15472662 -235215192 + AluY SINE Alu 1 286 -25 216 0 0 0 chr2 15472662 15472686 -235215168 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2196 67 17 3 chr2 15472888 15473188 -235214666 - AluY SINE Alu -7 304 1 201 273 15 15 chr2 15474120 15474186 -235213668 + L3 LINE CR1 878 943 -634 630 277 184 0 chr2 15475061 15475267 -235212587 - MIR SINE MIR -4 258 15 245 322 136 47 chr2 15475741 15475955 -235211899 + MIR SINE MIR 25 257 -5 523 291 30 0 chr2 15476015 15476180 -235211674 - L3 LINE CR1 -228 1349 1180 396 364 63 31 chr2 15477085 15477404 -235210450 + L3b LINE CR1 1179 1507 -76 374 203 38 0 chr2 15477849 15477928 -235209926 + Tigger3(Golem) DNA MER2_type 1 82 -2947 * 1167 155 91 94 chr2 15477926 15477955 -235209899 + Tigger3(Golem) DNA MER2_type 2722 2750 -279 1895 152 0 0 chr2 15477955 15478245 -235209609 - AluSx SINE Alu -22 290 1 1167 155 91 94 chr2 15478245 15478290 -235209564 + Tigger3(Golem) DNA MER2_type 2750 2794 -235 2070 68 0 90 chr2 15478290 15478657 -235209197 - AluSg SINE Alu 0 339 1 183 42 0 0 chr2 15478658 15478682 -235209172 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2069 98 3 3 chr2 15478682 15478968 -235208886 - AluSq SINE Alu -27 286 1 1167 155 91 94 chr2 15478968 15479197 -235208657 + Tigger3(Golem) DNA MER2_type 2792 3029 0 222 283 0 0 chr2 15479197 15479257 -235208597 + (TATG)n Simple_repeat Simple_repeat 3 62 0 2467 226 66 21 chr2 15479279 15479842 -235208012 + MER82 DNA MER2_type 7 594 -59 811 179 19 12 chr2 15479844 15480006 -235207848 - AluSp SINE Alu -16 297 135 272 254 16 0 chr2 15480006 15480069 -235207785 + MER82 DNA MER2_type 589 652 -1 264 161 37 0 chr2 15480523 15480604 -235207250 + (TG)n Simple_repeat Simple_repeat 1 84 0 896 291 42 0 chr2 15480660 15480901 -235206953 + MIR SINE MIR 12 262 0 705 160 120 4 chr2 15481514 15481739 -235206115 + AluSx SINE Alu 5 255 -57 198 128 0 0 chr2 15481764 15481803 -235206051 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 835 260 70 45 chr2 15481828 15482344 -235205510 + HAL1 LINE L1 1978 2506 -1 918 151 7 0 chr2 15483157 15483303 -235204551 - AluSg/x SINE Alu -26 286 140 217 200 44 0 chr2 15483333 15483378 -235204476 + CT-rich Low_complexity Low_complexity 3 49 0 24 0 0 0 chr2 15483378 15483402 -235204452 + AT_rich Low_complexity Low_complexity 1 24 0 524 294 80 33 chr2 15483457 15483732 -235204122 - L2 LINE L2 -101 3212 2925 301 263 128 38 chr2 15483823 15483956 -235203898 - LTR16A LTR ERVL -10 440 296 798 264 68 28 chr2 15483970 15484296 -235203558 - HERV16 LTR ERVL -4468 528 190 521 319 72 50 chr2 15484472 15484559 -235203295 - LTR16A LTR ERVL -30 420 336 2176 116 0 0 chr2 15484559 15484869 -235202985 + AluSx SINE Alu 2 311 -1 521 319 72 50 chr2 15484869 15485101 -235202753 - LTR16A LTR ERVL -114 336 94 2193 116 3 0 chr2 15485634 15485945 -235201909 + AluSx SINE Alu 1 312 0 631 160 15 2 chr2 15485972 15486234 -235201620 + AluSx SINE Alu 1 308 -1 198 175 100 0 chr2 15486443 15486483 -235201371 - L2 LINE L2 -11 3261 3218 611 243 79 21 chr2 15487247 15487436 -235200418 + MIR SINE MIR 12 211 -51 245 325 145 75 chr2 15487792 15487846 -235200008 + L2 LINE L2 2485 2534 -780 1925 133 0 3 chr2 15487846 15488169 -235199685 - AluSx SINE Alu 0 322 1 245 325 145 75 chr2 15488169 15488368 -235199486 + L2 LINE L2 2534 2757 -557 217 329 12 37 chr2 15488568 15488650 -235199204 - L2 LINE L2 0 3313 3234 345 87 0 0 chr2 15488767 15488813 -235199041 - Alu SINE Alu -262 46 1 246 160 0 20 chr2 15488876 15488926 -235198928 - L2 LINE L2 -1 3312 3264 1855 141 0 35 chr2 15489225 15489537 -235198317 + AluSx SINE Alu 1 301 -11 602 186 0 0 chr2 15489878 15489980 -235197874 + MLT1I LTR MaLR 308 409 0 275 272 123 41 chr2 15490859 15490999 -235196855 - MIR SINE MIR -68 140 23 2024 121 6 19 chr2 15491498 15491813 -235196041 + AluSx SINE Alu 1 311 -1 1716 91 43 0 chr2 15492029 15492283 -235195571 + AluSx SINE Alu 1 265 -47 27 0 0 0 chr2 15492287 15492314 -235195540 + AT_rich Low_complexity Low_complexity 1 27 0 1033 145 19 39 chr2 15493770 15493804 -235194050 + AluSg/x SINE Alu 106 139 -173 2117 124 0 0 chr2 15493804 15494103 -235193751 + AluSx SINE Alu 1 299 -13 1033 145 19 39 chr2 15494103 15494275 -235193579 + AluSg/x SINE Alu 139 308 -4 443 286 133 32 chr2 15494331 15495026 -235192828 - L1ME4a LINE L1 -113 6008 5219 1969 133 0 7 chr2 15495276 15495576 -235192278 - AluJb SINE Alu -14 298 1 200 111 28 0 chr2 15495665 15495701 -235192153 + (TG)n Simple_repeat Simple_repeat 2 38 0 1143 195 180 0 chr2 15495934 15496206 -235191648 - MSTD LTR MaLR 0 396 76 3253 129 23 4 chr2 15496289 15496776 -235191078 + MER41E LTR ERV1 1 496 -16 397 200 12 12 chr2 15496767 15496847 -235191007 - MSTD LTR MaLR -316 80 1 * 216 237 301 11 chr2 15497118 15497211 -235190643 - MIR SINE MIR -73 135 16 274 274 27 0 chr2 15498345 15498418 -235189436 - MIR SINE MIR -87 175 101 216 135 0 0 chr2 15502263 15502300 -235185554 + (T)n Simple_repeat Simple_repeat 1 37 0 534 270 220 10 chr2 15503509 15503709 -235184145 - MIR SINE MIR -1 261 20 231 167 0 0 chr2 15503781 15503823 -235184031 + (TA)n Simple_repeat Simple_repeat 2 43 0 2153 103 0 0 chr2 15503829 15504131 -235183723 - AluSq SINE Alu -11 302 1 203 175 0 0 chr2 15504322 15504362 -235183492 + GA-rich Low_complexity Low_complexity 3 42 0 193 287 53 43 chr2 15505955 15506049 -235181805 - MIR SINE MIR -87 175 81 206 292 92 0 chr2 15506549 15506614 -235181240 + L3 LINE CR1 1265 1335 -242 231 273 45 34 chr2 15506788 15506876 -235180978 - MIR SINE MIR -60 148 60 2060 117 0 7 chr2 15506911 15507210 -235180644 - AluSc SINE Alu -12 297 1 212 353 69 0 chr2 15508639 15508741 -235179113 + L2 LINE L2 3146 3254 -18 261 254 123 14 chr2 15509257 15509395 -235178459 + L1ME1 LINE L1 3006 3158 -2988 621 122 8 15 chr2 15509395 15509633 -235178221 + AluSx SINE Alu 19 306 -6 6853 215 43 82 chr2 15509639 15509731 -235178123 + L1ME1 LINE L1 3170 3264 -2902 2419 180 13 15 chr2 15509731 15510193 -235177661 + MER65C LTR ERV1 1 461 0 6853 215 43 82 chr2 15510193 15511634 -235176220 + L1ME1 LINE L1 3264 4760 -1406 2036 122 10 10 chr2 15511634 15511946 -235175908 + AluSx SINE Alu 1 312 0 6853 215 43 82 chr2 15511946 15512488 -235175366 + L1ME1 LINE L1 4760 5322 -844 1449 181 61 20 chr2 15512488 15512781 -235175073 + AluJo SINE Alu 1 305 -7 6853 215 43 82 chr2 15512781 15513173 -235174681 + L1ME1 LINE L1 5322 5728 -438 2379 113 25 22 chr2 15513173 15513536 -235174318 + THE1B LTR MaLR 1 364 0 6853 215 43 82 chr2 15513536 15513573 -235174281 + L1ME1 LINE L1 5728 5765 -401 2233 111 0 0 chr2 15513573 15513880 -235173974 + AluSx SINE Alu 1 307 -5 6853 215 43 82 chr2 15513880 15514124 -235173730 + L1ME1 LINE L1 5765 6017 -149 2389 81 3 0 chr2 15514124 15514432 -235173422 + AluSp SINE Alu 5 313 0 6853 215 43 82 chr2 15514432 15514494 -235173360 + L1ME1 LINE L1 6017 6080 -86 602 217 9 0 chr2 15514494 15514609 -235173245 + FLAM_A SINE Alu 1 116 -17 266 85 0 21 chr2 15514618 15514665 -235173189 + (TA)n Simple_repeat Simple_repeat 1 46 0 6853 215 43 82 chr2 15514665 15514728 -235173126 + L1ME1 LINE L1 6088 5929 -237 2076 115 26 0 chr2 15514728 15515033 -235172821 + AluSq SINE Alu 1 313 0 6853 215 43 82 chr2 15515033 15515126 -235172728 + L1ME1 LINE L1 5928 6023 -143 2064 114 0 0 chr2 15515126 15515423 -235172431 + AluSx SINE Alu 1 297 -15 659 200 19 19 chr2 15515434 15515589 -235172265 + L1MA10 LINE L1 6180 6334 0 267 299 60 22 chr2 15515639 15515773 -235172081 + HAL1 LINE L1 1810 1948 -559 2083 102 7 0 chr2 15515798 15516081 -235171773 + AluSx SINE Alu 1 285 -27 836 283 133 54 chr2 15516481 15517242 -235170612 + L2 LINE L2 1863 2683 -631 1985 141 0 0 chr2 15517498 15517802 -235170052 - AluSx SINE Alu -8 304 1 461 281 20 48 chr2 15517855 15518001 -235169853 + MIR3 SINE MIR 4 145 -63 25 0 0 0 chr2 15518610 15518635 -235169219 + AT_rich Low_complexity Low_complexity 1 25 0 373 254 125 49 chr2 15518989 15519253 -235168601 + HAL1 LINE L1 2220 2503 -4 742 129 17 46 chr2 15519260 15519500 -235168354 + GA-rich Low_complexity Low_complexity 1 233 0 2076 119 10 0 chr2 15519650 15519952 -235167902 + AluSp SINE Alu 1 305 -8 611 271 88 41 chr2 15520548 15520832 -235167022 + L1MC4a LINE L1 5706 6010 -1798 1328 133 24 139 chr2 15520832 15521169 -235166685 + AluSx SINE Alu 1 298 -4 611 271 88 41 chr2 15521169 15521224 -235166630 + L1MC4a LINE L1 6010 6061 -1747 595 304 120 69 chr2 15521227 15521717 -235166137 + L1MC4a LINE L1 6082 6596 -1212 279 191 0 0 chr2 15521717 15521780 -235166074 + GA-rich Low_complexity Low_complexity 1 63 0 242 182 45 0 chr2 15521783 15521827 -235166027 + L1MC4 LINE L1 6697 6742 -1300 1771 42 9 0 chr2 15521827 15522041 -235165813 + L1PA3 LINE L1 5937 6152 -3 1874 220 32 131 chr2 15522099 15522824 -235165030 + L1MC5 LINE L1 6669 7230 -731 453 81 0 0 chr2 15522824 15522886 -235164968 + (TGGA)n Simple_repeat Simple_repeat 3 64 0 1874 220 32 131 chr2 15522886 15523358 -235164496 + L1MC5 LINE L1 7230 7747 -214 426 197 28 0 chr2 15523489 15523560 -235164294 + MER81 DNA DNA 5 77 -37 1495 194 51 0 chr2 15523563 15523856 -235163998 + AluJb SINE Alu 1 308 -4 505 299 138 31 chr2 15523872 15524257 -235163597 + L1MC/D LINE L1 5353 5778 -2030 1736 145 0 53 chr2 15524258 15524561 -235163293 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr2 15524566 15524588 -235163266 + AT_rich Low_complexity Low_complexity 1 22 0 325 236 97 0 chr2 15524725 15524797 -235163057 - MER58 DNA MER1_type 0 2420 2342 283 323 96 25 chr2 15524788 15524986 -235162868 + MLT1J2 LTR MaLR 116 327 -123 * 1479 164 141 0 chr2 15525065 15525321 -235162533 + AluJo SINE Alu 2 293 -9 231 286 31 61 chr2 15525563 15525661 -235162193 - MIR SINE MIR -75 187 93 263 307 46 38 chr2 15526071 15526231 -235161623 + MIR SINE MIR 30 188 -57 1141 231 108 91 chr2 15526477 15526574 -235161280 + MLT1G1 LTR MaLR 1 95 -500 2066 123 0 0 chr2 15526574 15526874 -235160980 + AluSq SINE Alu 1 300 -13 1141 231 108 91 chr2 15526874 15527361 -235160493 + MLT1G1 LTR MaLR 95 595 0 381 295 102 55 chr2 15527556 15527922 -235159932 - L2 LINE L2 0 3272 2864 2084 116 0 10 chr2 15527922 15528233 -235159621 + AluSx SINE Alu 1 308 -4 381 295 102 55 chr2 15528233 15528374 -235159480 - L2 LINE L2 -408 2864 2731 432 0 0 0 chr2 15528668 15528716 -235159138 + (CA)n Simple_repeat Simple_repeat 1 48 0 243 88 0 0 chr2 15529208 15529242 -235158612 + (CA)n Simple_repeat Simple_repeat 1 34 0 288 100 125 75 chr2 15530035 15530115 -235157739 + MER5A DNA MER1_type 9 92 -97 205 186 68 34 chr2 15530645 15530704 -235157150 - MIR SINE MIR -70 192 132 455 309 67 6 chr2 15531882 15532047 -235155807 - MIR SINE MIR -80 182 8 1841 157 0 10 chr2 15532502 15532815 -235155039 + AluSx SINE Alu 2 311 -1 3037 150 2 43 chr2 15532969 15533550 -235154304 + L1MB3 LINE L1 5613 6169 -14 437 226 104 0 chr2 15533600 15533715 -235154139 - MIR SINE MIR -66 142 16 236 311 37 30 chr2 15533843 15533978 -235153876 + MIR3 SINE MIR 66 201 -7 198 0 0 0 chr2 15534447 15534469 -235153385 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 809 249 117 36 chr2 15534678 15535181 -235152673 - L1ME4a LINE L1 0 6121 5578 180 263 128 98 chr2 15535350 15535483 -235152371 + MIR3 SINE MIR 5 141 -67 588 222 54 76 chr2 15536489 15536674 -235151180 + HAL1 LINE L1 25 205 -2302 230 252 119 84 chr2 15536864 15536883 -235150971 + HAL1 LINE L1 1301 1318 -1189 486 0 0 0 chr2 15536883 15536937 -235150917 + (TA)n Simple_repeat Simple_repeat 2 55 0 1460 171 0 8 chr2 15536937 15537189 -235150665 - AluJb SINE Alu -26 286 37 230 252 119 84 chr2 15537189 15537311 -235150543 + HAL1 LINE L1 1317 1448 -1059 203 54 81 0 chr2 15537323 15537360 -235150494 + T-rich Low_complexity Low_complexity 3 42 0 794 207 59 17 chr2 15537375 15537612 -235150242 + HAL1 LINE L1 1508 1754 -753 4674 231 67 109 chr2 15537631 15538239 -235149615 + L1MEc LINE L1 66 698 -5698 950 129 8 0 chr2 15538239 15538371 -235149483 + FLAM_C SINE Alu 1 133 0 4674 231 67 109 chr2 15538371 15538561 -235149293 + L1MEc LINE L1 698 895 -5501 1722 157 3 23 chr2 15538561 15538867 -235148987 + AluSx SINE Alu 1 300 -12 4674 231 67 109 chr2 15538867 15539207 -235148647 + L1MEc LINE L1 895 1248 -5148 295 274 23 3 chr2 15539207 15539323 -235148531 + MLT1F1 LTR MaLR 30 147 -420 4674 231 67 109 chr2 15539323 15539375 -235148479 + L1MEc LINE L1 1248 1301 -5095 1901 140 3 0 chr2 15539375 15539667 -235148187 + AluSx SINE Alu 1 293 -19 4674 231 67 109 chr2 15539667 15540665 -235147189 + L1MEc LINE L1 1301 2274 -4122 437 287 32 43 chr2 15540670 15540858 -235146996 + MLT1F1 LTR MaLR 1 186 -356 225 132 0 0 chr2 15540858 15540896 -235146958 + (TC)n Simple_repeat Simple_repeat 2 39 0 212 119 0 24 chr2 15540917 15540959 -235146895 + (TC)n Simple_repeat Simple_repeat 2 42 0 962 216 118 15 chr2 15540959 15541276 -235146578 + MLT1F1 LTR MaLR 184 567 0 3674 146 41 65 chr2 15541327 15541635 -235146219 + L1MB4 LINE L1 5444 5758 -422 1903 117 0 4 chr2 15541635 15541908 -235145946 + AluSx SINE Alu 21 292 -20 3674 146 41 65 chr2 15541908 15542066 -235145788 + L1MB4 LINE L1 5758 5918 -262 2147 113 3 3 chr2 15542066 15542375 -235145479 + AluSg1 SINE Alu 1 309 0 3674 146 41 65 chr2 15542375 15542662 -235145192 + L1MB4 LINE L1 5918 6180 0 538 259 102 25 chr2 15542660 15542934 -235144920 + L1MEc LINE L1 2262 2556 -3659 * 1922 127 0 10 chr2 15542935 15543226 -235144628 + AluSx SINE Alu 1 288 -24 533 196 0 0 chr2 15543255 15543357 -235144497 + U13 snRNA snRNA 1 102 -2 22 0 0 0 chr2 15543366 15543388 -235144466 + AT_rich Low_complexity Low_complexity 1 22 0 1694 212 20 36 chr2 15543388 15543671 -235144183 + L1MEc LINE L1 2546 2821 -3394 2054 128 0 0 chr2 15543671 15543969 -235143885 - AluSx SINE Alu -14 298 1 1694 212 20 36 chr2 15543969 15544129 -235143725 + L1MEc LINE L1 2821 2982 -3233 4104 150 93 50 chr2 15544494 15545436 -235142418 - THE1C-int LTR MaLR -597 983 1 2505 112 11 16 chr2 15545436 15545812 -235142042 - THE1C LTR MaLR 0 375 2 2785 237 38 3 chr2 15545813 15546396 -235141458 + MER82 DNA MER2_type 45 647 -6 1959 141 3 3 chr2 15546732 15547031 -235140823 + AluSx SINE Alu 1 299 -13 482 318 103 20 chr2 15548839 15549034 -235138820 - MIR SINE MIR -15 247 37 185 289 58 0 chr2 15549657 15549709 -235138145 + L2 LINE L2 3217 3271 -1 612 167 0 0 chr2 15549763 15549865 -235137989 + MER81 DNA DNA 7 108 -6 271 333 72 56 chr2 15549872 15550061 -235137793 - L2 LINE L2 -21 3251 3067 1516 51 0 0 chr2 15550061 15550238 -235137616 - AluY SINE Alu -14 297 121 271 333 72 56 chr2 15550238 15550480 -235137374 - L2 LINE L2 -205 3067 2813 330 211 0 0 chr2 15550589 15550646 -235137208 - L2 LINE L2 -1 3271 3215 460 211 238 7 chr2 15552125 15552272 -235135582 + MER5A DNA MER1_type 9 189 0 680 222 0 81 chr2 15552280 15552465 -235135389 + MER5B DNA MER1_type 1 170 -8 582 278 22 120 chr2 15552642 15552868 -235134986 + L2 LINE L2 2981 3167 -105 1958 88 4 0 chr2 15552868 15553117 -235134737 - AluSc SINE Alu -45 264 15 582 278 22 120 chr2 15553117 15553214 -235134640 + L2 LINE L2 3167 3272 0 206 333 43 0 chr2 15553221 15553290 -235134564 - L2 LINE L2 -64 3249 3178 380 243 18 36 chr2 15556143 15556254 -235131600 + L3 LINE CR1 1312 1420 -157 204 256 0 0 chr2 15556272 15556311 -235131543 - L2 LINE L2 -20 3293 3255 391 285 73 29 chr2 15556336 15556473 -235131381 - MIR3 SINE MIR -63 145 3 934 207 122 89 chr2 15556486 15556878 -235130976 - MLT1G1 LTR MaLR -98 497 93 2062 145 58 32 chr2 15557079 15557615 -235130239 - MLT2A2 LTR ERVL 0 554 3 199 364 82 0 chr2 15557620 15557730 -235130124 - L2 LINE L2 -575 2739 2621 289 319 64 0 chr2 15558342 15558436 -235129418 - MLT1G1 LTR MaLR -489 106 7 1587 230 49 37 chr2 15558523 15558592 -235129262 - MER119 DNA MER1_type -38 545 478 216 0 0 0 chr2 15558592 15558616 -235129238 + (TA)n Simple_repeat Simple_repeat 1 24 0 1587 230 49 37 chr2 15558616 15558983 -235128871 - MER119 DNA MER1_type -105 478 71 2185 130 10 0 chr2 15558983 15559291 -235128563 + AluSq SINE Alu 1 311 -2 1587 230 49 37 chr2 15559291 15559363 -235128491 - MER119 DNA MER1_type -512 71 1 2390 103 0 0 chr2 15559808 15560109 -235127745 + AluSx SINE Alu 2 302 -10 2767 128 25 11 chr2 15561276 15561395 -235126459 - L1PA16 LINE L1 0 6166 6050 2589 44 0 0 chr2 15561395 15561691 -235126163 - AluY SINE Alu -15 296 1 2767 128 25 11 chr2 15561691 15562016 -235125838 - L1PA16 LINE L1 -116 6050 5716 201 125 125 0 chr2 15562021 15562061 -235125793 - MIR SINE MIR -62 146 102 2117 127 0 0 chr2 15563220 15563526 -235124328 - AluSq SINE Alu 0 306 1 200 139 0 23 chr2 15563815 15563858 -235123996 + (TCC)n Simple_repeat Simple_repeat 1 42 0 234 108 0 0 chr2 15563912 15563949 -235123905 - MIR SINE MIR -67 141 105 191 397 25 0 chr2 15564150 15564271 -235123583 + MIR SINE MIR 114 237 -25 1116 236 63 0 chr2 15564305 15564542 -235123312 + MIR SINE MIR 10 261 -1 1408 179 103 19 chr2 15564693 15564956 -235122898 + AluJo SINE Alu 1 285 -27 280 333 99 58 chr2 15565034 15565346 -235122508 - L2 LINE L2 -6 3266 2942 281 338 63 46 chr2 15566110 15566357 -235121497 + MIR3 SINE MIR 5 253 -9 299 299 112 19 chr2 15566452 15566559 -235121295 - L2 LINE L2 0 3272 3156 2537 107 13 16 chr2 15566796 15567170 -235120684 - THE1C LTR MaLR -2 373 1 4359 131 33 11 chr2 15567170 15567903 -235119951 - THE1C-int LTR MaLR 0 1580 832 193 315 55 0 chr2 15568612 15568685 -235119169 - MIR3 SINE MIR -9 199 123 1755 186 9 25 chr2 15568719 15569042 -235118812 - 7SLRNA srpRNA srpRNA -1 319 2 671 226 66 104 chr2 15569079 15569367 -235118487 - L2 LINE L2 0 3313 3037 2422 105 0 0 chr2 15569492 15569798 -235118056 + AluSg SINE Alu 1 306 -4 238 290 41 94 chr2 15569875 15569902 -235117952 + MIR SINE MIR 8 35 -227 2226 110 0 7 chr2 15569902 15570194 -235117660 + AluSx SINE Alu 1 290 -22 238 290 41 94 chr2 15570194 15570228 -235117626 + MIR SINE MIR 35 69 -193 2455 84 3 0 chr2 15570228 15570527 -235117327 + AluSp SINE Alu 1 300 -13 238 290 41 94 chr2 15570527 15570656 -235117198 + MIR SINE MIR 69 186 -76 1668 179 11 7 chr2 15570656 15570941 -235116913 - AluJb SINE Alu -26 286 1 238 290 41 94 chr2 15570941 15570993 -235116861 + MIR SINE MIR 186 239 -23 298 305 63 42 chr2 15571773 15571935 -235115919 + MIR3 SINE MIR 20 187 -21 1740 201 0 79 chr2 15572011 15572172 -235115682 + MSTD LTR MaLR 3 175 -221 4991 96 39 0 chr2 15572172 15572837 -235115017 + LTR8 LTR ERV1 1 691 0 1740 201 0 79 chr2 15572837 15573021 -235114833 + MSTD LTR MaLR 175 310 -86 2465 87 3 0 chr2 15573021 15573333 -235114521 + AluSp SINE Alu 1 313 0 1740 201 0 79 chr2 15573333 15573414 -235114440 + MSTD LTR MaLR 310 396 0 337 316 66 0 chr2 15573419 15573555 -235114299 + MIR SINE MIR 47 191 -71 205 281 31 0 chr2 15573749 15573813 -235114041 + L2 LINE L2 3246 3311 -2 274 165 72 124 chr2 15574780 15574840 -235113014 - MER81 DNA DNA 0 114 59 2228 114 3 0 chr2 15574840 15575147 -235112707 + AluSx SINE Alu 1 308 -4 274 165 72 124 chr2 15575147 15575183 -235112671 - MER81 DNA DNA -55 59 23 2321 100 3 0 chr2 15575749 15576060 -235111794 + AluSx SINE Alu 1 312 0 2222 108 3 0 chr2 15576941 15577259 -235110595 + AluSq SINE Alu 1 319 0 878 210 0 31 chr2 15578250 15578408 -235109446 + AluSg/x SINE Alu 120 272 -38 19988 51 3 1 chr2 15578408 15581679 -235106175 + L1PA5 LINE L1 2875 6149 -5 878 210 0 31 chr2 15581679 15581715 -235106139 + AluSg/x SINE Alu 272 308 -2 317 161 81 0 chr2 15581739 15581801 -235106053 + MER5B DNA MER1_type 109 175 -3 285 362 43 5 chr2 15581829 15582014 -235105840 + L2 LINE L2 2275 2466 -848 432 263 206 19 chr2 15582504 15582713 -235105141 + MIR SINE MIR 7 254 -8 2024 139 0 23 chr2 15582716 15583018 -235104836 - AluJb SINE Alu -17 295 1 24 0 0 0 chr2 15583024 15583048 -235104806 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 124 15 chr2 15583278 15583415 -235104439 + MIR SINE MIR 45 196 -66 185 281 70 0 chr2 15583477 15583534 -235104320 - MIR SINE MIR -65 197 137 1593 212 107 21 chr2 15584320 15584750 -235103104 - MLT1C LTR MaLR 0 467 1 2604 51 0 0 chr2 15584770 15585066 -235102788 - AluY SINE Alu -15 296 1 334 293 70 38 chr2 15585069 15585226 -235102628 - L2 LINE L2 -10 3262 3101 2128 144 0 6 chr2 15585541 15585854 -235102000 - AluSx SINE Alu -1 311 1 234 274 169 31 chr2 15587063 15587214 -235100640 + MIR SINE MIR 1 156 -65 5537 135 37 47 chr2 15587286 15588053 -235099801 - Tigger1 DNA MER2_type -1406 1012 256 2537 81 10 0 chr2 15588053 15588363 -235099491 + AluSq SINE Alu 1 313 0 5537 135 37 47 chr2 15588363 15588616 -235099238 - Tigger1 DNA MER2_type -2162 256 2 269 317 29 19 chr2 15589384 15589488 -235098366 + MIR SINE MIR 30 134 -74 1701 194 10 0 chr2 15589710 15590004 -235097850 + AluJb SINE Alu 1 297 -15 208 348 104 26 chr2 15590644 15590759 -235097095 + MIR3 SINE MIR 7 130 -78 2082 148 3 0 chr2 15590763 15591073 -235096781 - AluSx SINE Alu -1 311 1 346 231 29 29 chr2 15591333 15591437 -235096417 + MIR SINE MIR 49 152 -110 840 180 0 103 chr2 15592564 15592641 -235095213 - MER3 DNA MER1_type 0 209 126 2145 131 28 47 chr2 15592641 15592905 -235094949 + L1MB4 LINE L1 5758 6012 -168 1229 83 193 0 chr2 15592905 15593097 -235094757 - MER30 DNA MER1_type 0 230 2 2145 131 28 47 chr2 15593097 15593261 -235094593 + L1MB4 LINE L1 6012 6178 -2 840 180 0 103 chr2 15593261 15593416 -235094438 - MER3 DNA MER1_type -83 126 1 446 259 40 75 chr2 15594602 15594776 -235093078 - MIR3 SINE MIR -5 203 36 1737 129 4 0 chr2 15594847 15595088 -235092766 - AluSq SINE Alu -14 299 58 1768 101 8 8 chr2 15595089 15595327 -235092527 - AluSx SINE Alu -74 238 1 29 28 0 0 chr2 15595416 15595452 -235092402 + AT_rich Low_complexity Low_complexity 1 36 0 2470 87 0 0 chr2 15595462 15595760 -235092094 + AluY SINE Alu 1 298 -13 360 328 86 11 chr2 15595797 15595983 -235091871 + MIR SINE MIR 20 219 -43 313 297 34 23 chr2 15596226 15596374 -235091480 + MIR SINE MIR 1 144 -67 2313 107 7 0 chr2 15596576 15596875 -235090979 - AluSx SINE Alu -11 301 1 231 297 57 97 chr2 15597186 15597361 -235090493 - L3 LINE CR1 -14 1563 1396 227 100 0 25 chr2 15597386 15597426 -235090428 + (TTTTC)n Simple_repeat Simple_repeat 3 41 0 825 189 0 0 chr2 15597431 15597563 -235090291 - FLAM_C SINE Alu -1 132 1 1983 157 0 13 chr2 15597567 15597880 -235089974 - AluJb SINE Alu -1 311 3 866 253 64 40 chr2 15597962 15598232 -235089622 - MIR SINE MIR 0 262 9 2303 116 3 0 chr2 15598728 15599039 -235088815 - AluSx SINE Alu 0 312 1 261 0 0 0 chr2 15599112 15599141 -235088713 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2245 90 7 0 chr2 15599143 15599422 -235088432 - AluSq SINE Alu -31 282 2 181 208 19 75 chr2 15599741 15599794 -235088060 + L2 LINE L2 3241 3290 -23 209 56 0 56 chr2 15601997 15602033 -235085821 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 198 270 0 0 chr2 15602059 15602133 -235085721 + (TG)n Simple_repeat Simple_repeat 1 74 0 529 197 0 22 chr2 15603111 15603294 -235084560 + (TG)n Simple_repeat Simple_repeat 2 180 0 540 204 0 0 chr2 15603322 15603498 -235084356 + (TG)n Simple_repeat Simple_repeat 2 177 0 605 193 0 6 chr2 15603515 15603696 -235084158 + (TG)n Simple_repeat Simple_repeat 1 180 0 537 217 0 0 chr2 15603707 15603887 -235083967 + (TG)n Simple_repeat Simple_repeat 1 180 0 1947 132 0 0 chr2 15604782 15605054 -235082800 - AluSq SINE Alu -24 289 18 479 314 52 13 chr2 15605079 15605232 -235082622 - MIR SINE MIR -12 250 92 2242 91 13 17 chr2 15605865 15606163 -235081691 - AluSx SINE Alu -15 297 1 339 267 104 7 chr2 15606251 15606386 -235081468 + MIR3 SINE MIR 54 201 -7 918 127 0 0 chr2 15606883 15607041 -235080813 + (CA)n Simple_repeat Simple_repeat 1 158 0 2394 96 0 0 chr2 15607063 15607364 -235080490 + AluSg SINE Alu 1 301 -9 339 277 32 0 chr2 15607692 15607786 -235080068 - MIR3 SINE MIR -5 203 107 1549 219 58 11 chr2 15608357 15608704 -235079150 + MLT1A1 LTR MaLR 1 363 -2 2201 118 0 3 chr2 15608708 15609014 -235078840 - AluSx SINE Alu -7 305 1 281 293 0 13 chr2 15609041 15609116 -235078738 - MIR SINE MIR -63 145 72 296 268 60 104 chr2 15609465 15609648 -235078206 + MIR SINE MIR 77 251 -11 2342 107 0 0 chr2 15609990 15610290 -235077564 - AluSx SINE Alu -10 302 3 339 236 0 14 chr2 15610317 15610389 -235077465 + MIR SINE MIR 79 149 -113 963 114 0 0 chr2 15610542 15610673 -235077181 - FLAM_C SINE Alu -2 131 1 213 39 0 0 chr2 15610812 15610838 -235077016 + (GA)n Simple_repeat Simple_repeat 1 26 0 428 247 120 27 chr2 15610839 15610989 -235076865 + MIR SINE MIR 8 171 -91 312 302 0 0 chr2 15611468 15611554 -235076300 + MIR3 SINE MIR 114 199 -9 933 159 7 7 chr2 15611874 15612102 -235075752 + CT-rich Low_complexity Low_complexity 1 228 -339 2362 103 0 13 chr2 15612102 15612413 -235075441 - AluSp SINE Alu -6 307 1 933 159 7 7 chr2 15612413 15612441 -235075413 + CT-rich Low_complexity Low_complexity 227 567 0 2063 154 10 0 chr2 15612441 15612747 -235075107 - AluSx SINE Alu -3 309 1 360 152 0 0 chr2 15612906 15612972 -235074882 + GA-rich Low_complexity Low_complexity 1 66 0 2005 113 0 0 chr2 15613083 15613348 -235074506 + AluSx SINE Alu 5 269 -43 189 0 0 0 chr2 15613375 15613396 -235074458 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 181 343 55 14 chr2 15613722 15613795 -235074059 - L2 LINE L2 -39 3274 3199 294 361 68 8 chr2 15614000 15614133 -235073721 + L2 LINE L2 3124 3264 -8 253 287 93 46 chr2 15614135 15614243 -235073611 - MIR SINE MIR -75 133 21 721 134 29 29 chr2 15614409 15614581 -235073273 + CT-rich Low_complexity Low_complexity 3 174 0 747 180 0 180 chr2 15614651 15614901 -235072953 - AluSp SINE Alu -107 206 2 1755 123 8 0 chr2 15614954 15615198 -235072656 + AluSx SINE Alu 53 298 -14 252 345 88 9 chr2 15615343 15615456 -235072398 - MIR3 SINE MIR -43 165 44 369 43 0 0 chr2 15615471 15615518 -235072336 + (CA)n Simple_repeat Simple_repeat 2 48 0 354 271 47 0 chr2 15616202 15616309 -235071545 - MIR SINE MIR -59 203 92 262 258 237 0 chr2 15616599 15616692 -235071162 + L2 LINE L2 3158 3272 0 * 326 299 95 47 chr2 15616681 15616892 -235070962 - L2 LINE L2 -15 3257 3037 276 256 98 112 chr2 15616866 15617143 -235070711 + L3 LINE CR1 1268 1540 -37 * 2214 126 7 0 chr2 15617172 15617481 -235070373 - AluSp SINE Alu 0 313 3 189 276 0 17 chr2 15618054 15618112 -235069742 - MIR SINE MIR -67 141 85 227 288 0 27 chr2 15618401 15618474 -235069380 - L2 LINE L2 -215 3057 2987 408 269 30 0 chr2 15618482 15618754 -235069100 + (TCCA)n Simple_repeat Simple_repeat 1 280 0 231 224 28 0 chr2 15618774 15618881 -235068973 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 301 225 33 0 chr2 15618896 15619047 -235068807 + (TCCA)n Simple_repeat Simple_repeat 1 156 0 398 258 67 8 chr2 15619102 15619222 -235068632 - MIR SINE MIR -16 246 120 217 360 96 45 chr2 15619314 15619628 -235068226 + L2 LINE L2 2622 2951 -363 1830 194 35 30 chr2 15620201 15620573 -235067281 + MLT1A2 LTR MaLR 1 374 0 229 336 77 0 chr2 15620996 15621100 -235066754 + MIR SINE MIR 33 144 -64 736 205 0 0 chr2 15621406 15621528 -235066326 + AluJo SINE Alu 2 123 -189 186 133 0 0 chr2 15621529 15621559 -235066295 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1068 193 5 0 chr2 15621570 15621757 -235066097 + AluJo SINE Alu 118 305 -7 222 152 0 65 chr2 15622207 15622253 -235065601 + MIR SINE MIR 210 252 -10 * 300 136 0 0 chr2 15622225 15622269 -235065585 + L2 LINE L2 3270 3313 0 208 143 29 0 chr2 15622715 15622750 -235065104 + GA-rich Low_complexity Low_complexity 1 36 0 369 142 39 39 chr2 15622761 15622916 -235064938 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 213 320 48 63 chr2 15623914 15624120 -235063734 + L2 LINE L2 2637 2839 -475 1499 165 8 8 chr2 15625654 15625902 -235061952 + AluJo SINE Alu 33 280 -32 369 306 98 6 chr2 15626078 15626251 -235061603 + MIR SINE MIR 74 262 0 352 199 114 121 chr2 15626648 15626814 -235061040 + MIR SINE MIR 19 183 -79 522 57 0 0 chr2 15627139 15627209 -235060645 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 244 145 0 48 chr2 15627212 15627274 -235060580 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 1186 77 6 17 chr2 15627274 15627455 -235060399 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1921 151 4 0 chr2 15627456 15627734 -235060120 - AluSx SINE Alu -33 279 1 422 268 183 0 chr2 15627980 15628133 -235059721 + MER5A DNA MER1_type 9 189 0 384 226 9 52 chr2 15628937 15629052 -235058802 - Charlie2 DNA MER1_type -2634 148 39 432 288 30 15 chr2 15629081 15629213 -235058641 - MIR SINE MIR -20 242 109 231 152 38 25 chr2 15629581 15629660 -235058194 + CT-rich Low_complexity Low_complexity 2 81 0 252 305 0 0 chr2 15630064 15630123 -235057731 + L2 LINE L2 3209 3267 -5 2232 125 3 6 chr2 15630349 15630662 -235057192 + AluSx SINE Alu 1 312 0 250 296 148 0 chr2 15630679 15630794 -235057060 + MIR SINE MIR 2 133 -129 221 305 86 19 chr2 15631000 15631105 -235056749 - MIR SINE MIR -74 134 23 274 377 31 8 chr2 15631168 15631298 -235056556 + MIR3 SINE MIR 70 202 -6 261 264 25 83 chr2 15631439 15631560 -235056294 + L2 LINE L2 3151 3264 -8 805 257 8 9 chr2 15631771 15631986 -235055868 - MIR SINE MIR -6 256 42 433 229 53 23 chr2 15631974 15632105 -235055749 - MIR SINE MIR -19 243 109 * 576 200 15 37 chr2 15632184 15632319 -235055535 + MIR SINE MIR 19 150 -112 21 0 0 0 chr2 15632775 15632796 -235055058 + AT_rich Low_complexity Low_complexity 1 21 0 187 336 8 69 chr2 15633040 15633171 -235054683 - L2 LINE L2 -5 3308 3186 190 266 125 0 chr2 15633240 15633304 -235054550 + MIR SINE MIR 84 155 -107 945 248 81 0 chr2 15633307 15633529 -235054325 + MIR SINE MIR 2 241 -21 207 280 65 19 chr2 15633550 15633657 -235054197 + MIR SINE MIR 148 259 -3 623 259 24 6 chr2 15633739 15633909 -235053945 + MER5B DNA MER1_type 3 175 -3 1918 132 63 0 chr2 15633953 15634240 -235053614 - AluSx SINE Alu -7 305 1 729 295 106 73 chr2 15634313 15635033 -235052821 - L2 LINE L2 -9 3304 2499 2193 126 19 43 chr2 15635033 15635406 -235052448 - THE1B LTR MaLR 0 364 1 729 295 106 73 chr2 15635406 15635736 -235052118 - L2 LINE L2 -814 2499 2181 321 336 0 8 chr2 15636192 15636311 -235051543 + MIR3 SINE MIR 70 187 -21 379 239 68 34 chr2 15636759 15636876 -235050978 - L1MC5 LINE L1 -910 7051 6931 308 242 105 52 chr2 15636843 15636905 -235050949 - L1MC4 LINE L1 -969 7073 7016 * 2148 128 23 0 chr2 15636905 15637210 -235050644 - AluSx SINE Alu 0 312 1 308 242 105 52 chr2 15637210 15637235 -235050619 - L1MC4 LINE L1 -1026 7016 6994 1910 109 0 8 chr2 15637235 15637492 -235050362 - AluSg SINE Alu -6 304 50 308 242 105 52 chr2 15637492 15637556 -235050298 - L1MC4 LINE L1 -1048 6994 6913 420 250 158 8 chr2 15637561 15637681 -235050173 - MIR SINE MIR -71 191 54 246 309 136 0 chr2 15637940 15638050 -235049804 - L2 LINE L2 -239 3033 2909 24 32 0 0 chr2 15638402 15638433 -235049421 + AT_rich Low_complexity Low_complexity 1 31 0 245 250 147 22 chr2 15638469 15638605 -235049249 + L1ME4a LINE L1 5636 5788 -333 1862 177 7 0 chr2 15638682 15638992 -235048862 - AluJb SINE Alu 0 312 1 300 196 196 38 chr2 15639109 15639242 -235048612 + L1ME4a LINE L1 5967 6120 -1 243 333 57 57 chr2 15640718 15640877 -235046977 - L2 LINE L2 -2 3270 3112 217 323 118 11 chr2 15641439 15641532 -235046322 - L2 LINE L2 -1 3271 3169 740 161 25 0 chr2 15641717 15641835 -235046019 - FLAM_C SINE Alu -11 122 2 1976 140 0 7 chr2 15642053 15642353 -235045501 - AluSx SINE Alu -14 298 1 2356 110 0 0 chr2 15642563 15642872 -235044982 - AluSx SINE Alu -3 309 1 218 157 20 20 chr2 15643888 15643939 -235043915 + (GAGTG)n Simple_repeat Simple_repeat 1 51 0 191 271 157 0 chr2 15643992 15644062 -235043792 + MIR3 SINE MIR 127 207 -1 614 329 69 0 chr2 15644080 15644369 -235043485 + L1ME4a LINE L1 5566 5874 -247 1914 147 35 0 chr2 15644572 15644857 -235042997 + AluJb SINE Alu 11 305 -7 296 273 127 33 chr2 15646841 15646991 -235040863 - MIR3 SINE MIR -29 179 16 297 208 26 11 chr2 15848641 15848750 -234839104 - AluJ/monomer SINE Alu -256 46 2 2285 82 0 10 chr2 15848980 15849284 -234838570 - AluSx SINE Alu -11 301 1 231 197 28 70 chr2 15849692 15849763 -234838091 + MIR SINE MIR 54 122 -86 310 239 18 64 chr2 15850269 15850378 -234837476 + MIR SINE MIR 43 146 -116 2266 91 0 3 chr2 15850388 15850697 -234837157 - AluSg SINE Alu -2 308 1 202 274 0 0 chr2 15850887 15850938 -234836916 + (TG)n Simple_repeat Simple_repeat 1 51 0 499 325 69 35 chr2 15851288 15851722 -234836132 + L1ME4a LINE L1 5293 5754 -367 1704 147 63 0 chr2 15851722 15852007 -234835847 + AluSx SINE Alu 6 308 -4 499 325 69 35 chr2 15852007 15852169 -234835685 + L1ME4a LINE L1 5754 5909 -212 665 314 114 29 chr2 15853615 15853696 -234834158 + L2 LINE L2 2521 2594 -719 1968 176 52 6 chr2 15853696 15854043 -234833811 + MLT1A1 LTR MaLR 1 363 -2 665 314 114 29 chr2 15854043 15854439 -234833415 + L2 LINE L2 2594 3046 -267 1864 126 0 0 chr2 15854547 15854816 -234833038 + AluSx SINE Alu 2 270 -42 1697 132 0 45 chr2 15855133 15855267 -234832587 + AluJo SINE Alu 9 147 -163 2095 118 14 0 chr2 15855267 15855563 -234832291 + AluSq SINE Alu 2 301 -12 1697 132 0 45 chr2 15855563 15855743 -234832111 + AluJo SINE Alu 147 310 0 216 319 29 14 chr2 15855777 15855846 -234832008 - MIR3 SINE MIR -126 82 13 22 0 0 0 chr2 15855915 15855937 -234831917 + AT_rich Low_complexity Low_complexity 1 22 0 261 247 47 24 chr2 15856881 15856966 -234830888 - MIR SINE MIR -80 128 42 1571 120 12 4 chr2 15858055 15858297 -234829557 + AluJo SINE Alu 63 306 -6 283 335 42 42 chr2 15858730 15858897 -234828957 + MIR3 SINE MIR 33 199 -9 617 212 66 100 chr2 15859297 15859556 -234828298 - MIR SINE MIR 0 262 13 210 346 56 0 chr2 15859708 15859815 -234828039 - L2 LINE L2 0 3272 3160 248 281 16 0 chr2 15859821 15859885 -234827969 - L3 LINE CR1 -174 1403 1339 345 234 37 19 chr2 15859900 15860007 -234827847 + MER94 DNA DNA 18 126 -8 243 306 48 20 chr2 15860051 15860198 -234827656 - L3 LINE CR1 -298 1279 1129 220 328 164 35 chr2 15860602 15860919 -234826935 - L2 LINE L2 -88 3184 2827 208 297 178 10 chr2 15861622 15861723 -234826131 + MIR SINE MIR 40 157 -105 206 325 65 13 chr2 15861725 15861802 -234826052 + MIR SINE MIR 117 197 -65 303 316 85 17 chr2 15862106 15862283 -234825571 + L2 LINE L2 2708 2896 -418 313 260 80 20 chr2 15862745 15862845 -234825009 - MIR SINE MIR -93 169 64 543 256 16 8 chr2 15863831 15863960 -234823894 - MIR SINE MIR -113 149 20 305 336 67 0 chr2 15864226 15864345 -234823509 + L2 LINE L2 3146 3272 0 281 244 139 29 chr2 15865082 15865254 -234822600 + L1ME LINE L1 5592 5782 -339 1963 139 0 0 chr2 15865328 15865629 -234822225 - AluSq SINE Alu -12 301 1 358 219 55 202 chr2 15865831 15866178 -234821676 - L2 LINE L2 -20 3252 2957 2066 115 20 0 chr2 15866521 15866825 -234821029 - AluSg SINE Alu 0 310 1 408 333 213 30 chr2 15866929 15867247 -234820607 - L2 LINE L2 -415 2899 2641 1738 165 0 32 chr2 15867247 15867556 -234820298 + AluJo SINE Alu 1 299 -13 408 333 213 30 chr2 15867556 15868176 -234819678 - L2 LINE L2 -673 2641 1789 1389 205 106 54 chr2 15868483 15868927 -234818927 - MLT1C LTR MaLR 0 467 1 180 0 0 0 chr2 15869612 15869632 -234818222 + (TTGG)n Simple_repeat Simple_repeat 1 20 0 880 153 0 0 chr2 15869634 15869765 -234818089 - FRAM SINE Alu -23 153 23 213 39 0 0 chr2 15870317 15870343 -234817511 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 251 114 23 0 chr2 15870363 15870407 -234817447 + CT-rich Low_complexity Low_complexity 4 48 0 226 250 196 11 chr2 15870651 15870743 -234817111 + MIR SINE MIR 20 128 -80 211 217 0 22 chr2 15870847 15870893 -234816961 + L2 LINE L2 3265 3309 -4 2221 67 7 0 chr2 15871332 15871645 -234816209 + AluSp SINE Alu 1 315 0 222 150 0 0 chr2 15871666 15871706 -234816148 + (TTCCC)n Simple_repeat Simple_repeat 2 41 0 374 274 196 17 chr2 15872277 15872456 -234815398 + MIR SINE MIR 49 259 -3 2155 125 0 3 chr2 15874016 15874329 -234813525 - AluSx SINE Alu 0 312 1 2269 57 0 0 chr2 15874356 15874688 -234813166 - AluY SINE Alu 0 332 1 1651 187 0 10 chr2 15875384 15875689 -234812165 - AluJb SINE Alu -10 302 1 843 134 15 22 chr2 15876768 15876902 -234810952 + FLAM_C SINE Alu 1 133 0 4017 196 18 54 chr2 15876946 15877584 -234810270 - L1MB5 LINE L1 -36 6138 5479 2125 110 3 10 chr2 15877584 15877894 -234809960 - AluSq SINE Alu -3 310 3 4017 196 18 54 chr2 15877894 15878109 -234809745 - L1MB5 LINE L1 -695 5479 5258 1770 162 7 0 chr2 15878109 15878399 -234809455 - AluSx SINE Alu -20 292 1 4017 196 18 54 chr2 15878399 15878749 -234809105 - L1MB5 LINE L1 -916 5258 4964 622 264 38 50 chr2 15879138 15879399 -234808455 - MER46C DNA MER2_type -1 337 80 1175 142 16 129 chr2 15879433 15879743 -234808111 - AluJb SINE Alu -14 298 24 939 159 0 2 chr2 15879751 15879990 -234807864 - AluJb SINE Alu -8 304 22 261 0 0 0 chr2 15880006 15880035 -234807819 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2064 107 0 0 chr2 15880036 15880316 -234807538 - AluSx SINE Alu -32 280 1 231 169 73 140 chr2 15882337 15882515 -234805339 - L2 LINE L2 -190 3082 2917 317 206 21 202 chr2 15882570 15882636 -234805218 - L1MC4 LINE L1 0 8042 7966 2105 112 7 0 chr2 15882636 15882930 -234804924 - AluSx SINE Alu -16 296 1 317 206 21 202 chr2 15882930 15883106 -234804748 - L1MC4 LINE L1 -76 7966 7844 478 304 37 19 chr2 15883281 15883442 -234804412 - MIR SINE MIR -77 185 22 2005 125 3 28 chr2 15883446 15883766 -234804088 - AluSx SINE Alu 0 312 1 2025 132 0 3 chr2 15883768 15884072 -234803782 - AluSx SINE Alu -8 304 2 354 234 69 86 chr2 15884404 15884579 -234803275 + MIR SINE MIR 61 232 -30 475 262 39 0 chr2 15884810 15884913 -234802941 + L2 LINE L2 3199 3305 -8 2175 101 0 0 chr2 15884921 15885208 -234802646 + AluSq SINE Alu 8 294 -19 573 285 93 36 chr2 15885455 15885530 -234802324 - MLT1I LTR MaLR 0 409 340 1396 195 3 25 chr2 15885530 15885848 -234802006 + AluJo SINE Alu 2 312 0 573 285 93 36 chr2 15885848 15886074 -234801780 - MLT1I LTR MaLR -69 340 91 221 276 112 0 chr2 15886240 15886338 -234801516 - MIR3 SINE MIR -2 206 98 861 173 0 0 chr2 15886429 15886579 -234801275 + FRAM SINE Alu 12 161 -15 221 323 85 80 chr2 15886667 15886868 -234800986 - L2 LINE L2 -40 3232 3031 296 314 29 44 chr2 15887185 15887366 -234800488 - MIR SINE MIR -67 141 3 224 228 18 18 chr2 15887481 15887538 -234800316 + L2 LINE L2 3256 3312 -1 2140 121 0 0 chr2 15887657 15887964 -234799890 - AluY SINE Alu -4 307 1 247 336 84 17 chr2 15888020 15888139 -234799715 + MIR SINE MIR 49 175 -87 234 311 219 12 chr2 15888254 15888418 -234799436 + MIR SINE MIR 6 203 -59 235 208 0 0 chr2 15888830 15888883 -234798971 - MER91A DNA MER1_type -143 53 1 381 330 32 80 chr2 15889970 15890370 -234797484 - L2 LINE L2 -19 3253 2873 204 172 31 31 chr2 15890612 15890676 -234797178 + A-rich Low_complexity Low_complexity 6 69 0 2183 113 0 0 chr2 15890681 15890981 -234796873 + AluSx SINE Alu 1 300 -12 1030 215 14 14 chr2 15891241 15891460 -234796394 + MER20 DNA MER1_type 1 219 0 730 192 96 59 chr2 15891568 15891823 -234796031 + MLT1A2 LTR MaLR 1 351 -23 325 102 70 173 chr2 15892826 15892980 -234794874 - MLT1L LTR MaLR 0 577 449 375 225 23 78 chr2 15893314 15893443 -234794411 - MLT1L LTR MaLR -350 265 144 274 188 10 125 chr2 15894276 15894372 -234793482 - MER69 DNA AcHobo -13 2513 2429 1694 204 80 0 chr2 15894377 15894742 -234793112 + MLT2D LTR ERVL 1 444 -20 518 187 0 27 chr2 15894742 15894995 -234792859 + CT-rich Low_complexity Low_complexity 1 246 0 234 295 26 0 chr2 15895054 15895132 -234792722 - MER69 DNA AcHobo -97 80 1 1101 217 66 37 chr2 15897518 15897911 -234789943 + MLT1C LTR MaLR 8 467 0 23 0 0 0 chr2 15898225 15898248 -234789606 + AT_rich Low_complexity Low_complexity 1 23 0 2701 200 65 42 chr2 15898856 15899567 -234788287 - LTR8A LTR ERV1 0 727 1 1459 260 46 8 chr2 15899622 15900126 -234787728 + LTR28 LTR ERV1 1 1232 -131 336 284 37 0 chr2 15900730 15900811 -234787043 - MLT1G LTR MaLR -195 395 312 202 299 58 35 chr2 15901597 15901684 -234786170 + L2 LINE L2 2976 3064 -208 1261 206 8 4 chr2 15901800 15902053 -234785801 - AluJo SINE Alu -58 254 1 490 282 31 57 chr2 15902468 15902695 -234785159 - L2 LINE L2 -865 2449 2229 481 280 150 5 chr2 15902757 15902950 -234784904 + MLT1J LTR MaLR 89 309 -202 1945 224 35 23 chr2 15902958 15903475 -234784379 - MER39 LTR ERV1 0 707 5 2577 108 14 11 chr2 15903600 15903970 -234783884 - THE1C LTR MaLR -4 371 1 35 24 0 0 chr2 15903984 15904026 -234783828 + AT_rich Low_complexity Low_complexity 1 42 0 3335 191 25 47 chr2 15904029 15904853 -234783001 - L1MD2 LINE L1 -384 5975 5176 1734 150 38 0 chr2 15904853 15905146 -234782708 - AluSx SINE Alu -8 304 1 3335 191 25 47 chr2 15905146 15905229 -234782625 - L1MD2 LINE L1 -1183 5176 5093 289 301 157 30 chr2 15905613 15905779 -234782075 - L2 LINE L2 -6 3307 3121 423 232 27 72 chr2 15905893 15906059 -234781795 + MER45A DNA AcHobo 1 145 -33 1878 191 3 11 chr2 15906465 15906816 -234781038 + MER7A DNA MER2_type 1 346 0 252 282 0 51 chr2 15906845 15906923 -234780931 - MIR SINE MIR -118 144 71 300 250 133 8 chr2 15907700 15907828 -234780026 - MIR SINE MIR -100 162 19 281 302 23 12 chr2 15908808 15908894 -234778960 - MIR SINE MIR -118 144 58 231 321 131 0 chr2 15908905 15908989 -234778865 + MIR3 SINE MIR 62 156 -52 320 348 62 0 chr2 15909146 15909258 -234778596 - L2 LINE L2 -18 3254 3136 2098 92 27 0 chr2 15909276 15909570 -234778284 + AluSq SINE Alu 1 302 -11 1436 154 91 18 chr2 15909583 15909869 -234777985 + AluJo SINE Alu 4 310 -2 240 226 118 43 chr2 15909929 15910022 -234777832 + MIR SINE MIR 76 175 -87 601 240 34 28 chr2 15910307 15910486 -234777368 + MIR SINE MIR 13 192 -70 221 234 21 0 chr2 15910614 15910661 -234777193 + C-rich Low_complexity Low_complexity 2 49 0 563 219 35 0 chr2 15910821 15910935 -234776919 + MIR SINE MIR 75 192 -70 1968 117 0 59 chr2 15911303 15911627 -234776227 + AluSg SINE Alu 1 305 -5 255 264 68 96 chr2 15911649 15911742 -234776112 - MIR SINE MIR 0 262 168 1752 166 0 31 chr2 15911742 15911922 -234775932 - AluJo SINE Alu -2 310 143 2209 81 3 7 chr2 15911922 15912230 -234775624 - AluY SINE Alu -4 307 1 1752 166 0 31 chr2 15912230 15912369 -234775485 - AluJo SINE Alu -169 143 1 255 264 68 96 chr2 15912369 15912525 -234775329 - MIR SINE MIR -94 168 20 436 315 72 52 chr2 15913711 15914016 -234773838 + L2 LINE L2 2920 3230 -42 547 211 163 15 chr2 15914040 15914328 -234773526 - MLT1J2 LTR MaLR -22 424 71 222 260 0 0 chr2 15914366 15914416 -234773438 + L3 LINE CR1 1346 1395 -182 215 296 102 87 chr2 15915614 15915802 -234772052 - L2 LINE L2 0 3272 3082 285 306 33 16 chr2 15915802 15915923 -234771931 + MIR3 SINE MIR 3 125 -83 374 196 118 10 chr2 15916072 15916174 -234771680 - MIR3 SINE MIR -31 177 65 370 251 48 78 chr2 15917536 15917625 -234770229 - MER112 DNA MER1_type -7 253 170 2014 136 0 0 chr2 15917625 15917933 -234769921 + AluSx SINE Alu 1 308 -4 370 251 48 78 chr2 15917933 15918010 -234769844 - MER112 DNA MER1_type -90 170 92 263 313 61 9 chr2 15918156 15918271 -234769583 + MIR SINE MIR 89 209 -53 482 284 0 0 chr2 15919362 15919478 -234768376 - MIR SINE MIR -10 252 137 544 219 19 45 chr2 15919510 15919665 -234768189 + MER63 DNA MER1_type 1 777 -59 337 322 41 33 chr2 15919698 15919819 -234768035 - MIR SINE MIR -84 124 3 330 87 0 0 chr2 15919932 15919978 -234767876 + (CACCC)n Simple_repeat Simple_repeat 2 47 0 190 359 57 19 chr2 15920507 15920613 -234767241 - L2 LINE L2 0 3272 3163 * 250 365 112 17 chr2 15920612 15920790 -234767064 + L2 LINE L2 2865 3059 -213 263 310 26 35 chr2 15921244 15921357 -234766497 - MIR3 SINE MIR -9 199 88 363 244 0 106 chr2 15921663 15921786 -234766068 - MER94 DNA DNA -5 129 20 25793 24 0 7 chr2 15921853 15925679 -234762175 - L1PA3 LINE L1 0 6155 2351 12800 46 79 5 chr2 15925679 15927311 -234760543 - L1P LINE L1 -4389 1757 1 1994 128 0 16 chr2 15928322 15928627 -234759227 + AluJb SINE Alu 13 312 0 735 154 0 0 chr2 15928798 15928934 -234758920 + (TCCA)n Simple_repeat Simple_repeat 2 137 0 291 267 95 26 chr2 15928934 15929050 -234758804 - L2 LINE L2 0 3272 3149 1801 163 3 0 chr2 15929312 15929606 -234758248 - AluJb SINE Alu -17 295 1 359 246 52 52 chr2 15929606 15929740 -234758114 + MIR SINE MIR 91 224 -38 211 288 45 0 chr2 15929748 15929814 -234758040 - L2 LINE L2 0 3272 3204 417 271 111 60 chr2 15929958 15930157 -234757697 - MIR SINE MIR -3 259 51 399 214 201 17 chr2 15930544 15930677 -234757177 - FLAM_A SINE Alu -5 128 3 438 20 0 0 chr2 15931251 15931302 -234756552 + (CAG)n Simple_repeat Simple_repeat 1 51 0 228 163 0 0 chr2 15931302 15931345 -234756509 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 383 234 77 163 chr2 15931438 15931647 -234756207 + MER91A DNA MER1_type 1 191 -5 2102 224 8 3 chr2 15932031 15932423 -234755431 - MER70A LTR ERVL 0 472 79 1163 166 9 18 chr2 15932425 15932642 -234755212 - AluJo SINE Alu -14 298 84 422 299 11 48 chr2 15932714 15932901 -234754953 - L2 LINE L2 -3 3310 3131 189 255 78 0 chr2 15933842 15933893 -234753961 - L2 LINE L2 -1 3271 3217 180 301 63 77 chr2 15933997 15934140 -234753714 - L2 LINE L2 -161 3111 2971 232 217 29 58 chr2 15934648 15934717 -234753137 + MIR3 SINE MIR 119 185 -23 230 294 59 25 chr2 15934901 15935020 -234752834 - MIR SINE MIR -68 140 18 211 343 110 23 chr2 15936701 15936920 -234750934 - MIR SINE MIR -16 246 9 225 333 30 20 chr2 15937403 15937502 -234750352 - MIR SINE MIR -22 240 141 2453 198 11 19 chr2 15937872 15938346 -234749508 + MER82 DNA MER2_type 1 470 -183 853 143 0 7 chr2 15938350 15938490 -234749364 + FLAM_C SINE Alu 1 139 -4 565 311 67 0 chr2 15938492 15938672 -234749182 + MER82 DNA MER2_type 447 638 -15 234 0 0 0 chr2 15939799 15939825 -234748029 + (T)n Simple_repeat Simple_repeat 1 26 0 246 295 86 19 chr2 15940270 15940375 -234747479 + MIR SINE MIR 24 135 -73 258 284 27 0 chr2 15941639 15941713 -234746141 - MIR3 SINE MIR -21 187 112 283 287 47 33 chr2 15942061 15942211 -234745643 + MIR3 SINE MIR 20 171 -37 1014 254 35 19 chr2 15943027 15943283 -234744571 - MIR SINE MIR 0 262 3 346 302 149 27 chr2 15944525 15944747 -234743107 - MIR SINE MIR 0 262 14 383 294 118 18 chr2 15945672 15945842 -234742012 + MIR SINE MIR 72 258 -4 4202 160 24 21 chr2 15945882 15946602 -234741252 + MER72 LTR ERV1 1 722 0 2816 242 15 23 chr2 15946764 15947208 -234740646 + MER82 DNA MER2_type 5 444 -209 9310 112 6 0 chr2 15947208 15948487 -234739367 + HSMAR1 DNA Mariner 1 1287 0 2816 242 15 23 chr2 15948487 15948696 -234739158 + MER82 DNA MER2_type 444 653 0 187 350 92 6 chr2 15948758 15948921 -234738933 - L2 LINE L2 -1903 1411 1235 189 0 0 0 chr2 15949134 15949155 -234738699 + (A)n Simple_repeat Simple_repeat 1 21 0 497 276 147 0 chr2 15949536 15949692 -234738162 + MER5A DNA MER1_type 10 188 -1 974 239 96 96 chr2 15950529 15951465 -234736389 - L1ME4a LINE L1 -12 6109 5170 2032 154 0 0 chr2 15953236 15953541 -234734313 + AluSx SINE Alu 1 305 -7 312 256 65 53 chr2 15955948 15956220 -234731634 - L1ME LINE L1 -551 5570 5297 388 299 46 31 chr2 15956598 15956792 -234731062 + MER117 DNA MER1_type 1 197 0 261 271 139 33 chr2 15956814 15956936 -234730918 - MIR3 SINE MIR -52 156 22 218 180 20 20 chr2 15957421 15957471 -234730383 + (TTAA)n Simple_repeat Simple_repeat 2 51 0 288 327 71 9 chr2 15957705 15957818 -234730036 - L2 LINE L2 -13 3259 3140 2295 115 0 3 chr2 15957839 15958153 -234729701 + AluSq SINE Alu 1 313 0 461 113 0 0 chr2 15958188 15958250 -234729604 - L1PA16 LINE L1 -95 6071 6010 394 116 130 0 chr2 15958250 15958315 -234729539 + L1PA16 LINE L1 6078 6155 -11 1783 174 3 3 chr2 15958377 15958670 -234729184 - AluJb SINE Alu -16 296 4 326 180 16 0 chr2 15958710 15958771 -234729083 - MER2 DNA MER2_type -16 329 268 1146 168 14 5 chr2 15958798 15959007 -234728847 - MER2 DNA MER2_type -134 211 1 546 236 93 33 chr2 15959737 15959919 -234727935 + MIR SINE MIR 68 260 -2 262 309 21 10 chr2 15960005 15960102 -234727752 + MIR3 SINE MIR 99 196 -12 4012 190 62 23 chr2 15960323 15961143 -234726711 + MER21B LTR ERV1 1 852 -11 38 51 0 0 chr2 15961606 15961665 -234726189 + AT_rich Low_complexity Low_complexity 1 59 0 284 264 118 56 chr2 15961682 15961826 -234726028 - MIR SINE MIR -18 244 92 250 271 17 0 chr2 15962500 15962559 -234725295 + C-rich Low_complexity Low_complexity 1 60 0 224 325 174 58 chr2 15962559 15962972 -234724882 - L2 LINE L2 -5 3267 2807 327 318 82 15 chr2 15963668 15963863 -234723991 - MIR SINE MIR -26 236 29 186 296 19 19 chr2 15963926 15963980 -234723874 + MIR SINE MIR 17 70 -192 186 289 72 41 chr2 15964010 15964107 -234723747 + MIR SINE MIR 163 262 0 417 247 112 18 chr2 15964728 15964898 -234722956 - MIR SINE MIR -71 191 6 1847 180 7 0 chr2 15965440 15965740 -234722114 - AluJb SINE Alu -10 302 1 387 0 0 0 chr2 15965743 15965786 -234722068 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 2152 91 4 4 chr2 15965790 15966066 -234721788 - AluSx SINE Alu -24 288 13 859 243 0 20 chr2 15966135 15966337 -234721517 + MER3 DNA MER1_type 12 209 0 26 30 0 0 chr2 15967338 15967371 -234720483 + AT_rich Low_complexity Low_complexity 1 33 0 1128 206 0 0 chr2 15967912 15968101 -234719753 + MER5A DNA MER1_type 1 189 0 2171 121 7 0 chr2 15968136 15968433 -234719421 + AluSx SINE Alu 1 299 -13 215 355 125 34 chr2 15968439 15968760 -234719094 - L2 LINE L2 -568 2746 2397 2220 117 10 0 chr2 15969271 15969578 -234718276 - AluSx SINE Alu -2 310 1 362 280 17 42 chr2 15969578 15969685 -234718169 - MIR3 SINE MIR -10 198 93 543 323 12 36 chr2 15969801 15970052 -234717802 - MIR SINE MIR -17 245 1 345 306 127 52 chr2 15970180 15970353 -234717501 + L2 LINE L2 3077 3262 -10 2333 107 7 0 chr2 15970373 15970683 -234717171 + AluSx SINE Alu 1 312 0 206 260 87 58 chr2 15970715 15970819 -234717035 + L2 LINE L2 3166 3272 0 342 134 0 97 chr2 15970826 15970896 -234716958 + AluS SINE Alu 2 57 -246 302 350 71 7 chr2 15971366 15971506 -234716348 - MIR SINE MIR -94 168 20 426 287 116 12 chr2 15972696 15972860 -234714994 - MIR SINE MIR -19 243 63 2298 74 0 23 chr2 15972868 15973201 -234714653 - AluSg SINE Alu 0 310 1 359 299 28 9 chr2 15973504 15973611 -234714243 + MIR3 SINE MIR 82 190 -18 2085 115 24 3 chr2 15975940 15976228 -234711626 - AluSq SINE Alu -17 296 3 187 31 62 0 chr2 15976435 15976467 -234711387 + T-rich Low_complexity Low_complexity 2 35 0 568 210 153 45 chr2 15976571 15976728 -234711126 + MER5A DNA MER1_type 16 189 0 269 290 84 30 chr2 15977314 15977445 -234710409 - MIR SINE MIR 0 262 125 183 167 24 24 chr2 15978383 15978425 -234709429 - L2 LINE L2 -5 3308 3267 945 230 140 4 chr2 15978646 15978911 -234708943 + MLT1D LTR MaLR 205 505 0 258 288 131 25 chr2 15979172 15979332 -234708522 - L2 LINE L2 -173 3099 2923 203 380 44 32 chr2 15979397 15979555 -234708299 - L2 LINE L2 -498 2816 2657 248 397 47 34 chr2 15979812 15980109 -234707745 + L3 LINE CR1 49 349 -1228 210 37 0 0 chr2 15980940 15980967 -234706887 + (CA)n Simple_repeat Simple_repeat 1 27 0 3111 199 98 32 chr2 15982035 15982177 -234705677 - MER21B LTR ERV1 -2 861 730 204 40 0 0 chr2 15982177 15982202 -234705652 + (CAATT)n Simple_repeat Simple_repeat 2 26 0 3111 199 98 32 chr2 15982202 15982784 -234705070 - MER21B LTR ERV1 -133 730 89 346 405 16 5 chr2 15984179 15984364 -234703490 + MIR SINE MIR 24 210 -52 198 271 106 24 chr2 15984334 15984419 -234703435 + L2 LINE L2 2766 2857 -457 * 194 98 78 20 chr2 15984624 15984726 -234703128 + (TA)n Simple_repeat Simple_repeat 2 109 0 477 34 0 0 chr2 15985107 15985166 -234702688 + (CA)n Simple_repeat Simple_repeat 2 60 0 3625 191 12 21 chr2 15986846 15987046 -234700808 - L1MC2 LINE L1 -2 7764 7564 2378 85 0 0 chr2 15987046 15987340 -234700514 - AluSg SINE Alu -16 294 1 3625 191 12 21 chr2 15987340 15987885 -234699969 - L1MC2 LINE L1 -202 7564 6137 241 325 78 95 chr2 15988104 15988516 -234699338 + L2 LINE L2 2825 3229 -43 539 241 69 0 chr2 15989425 15989541 -234698313 + L1ME4a LINE L1 5519 5642 -479 2681 212 100 111 chr2 15989560 15990597 -234697257 - L1MC5 LINE L1 -33 7928 6883 1962 163 165 11 chr2 15990597 15991033 -234696821 + MLT1D LTR MaLR 3 505 0 2681 212 100 111 chr2 15991033 15991462 -234696392 - L1MC5 LINE L1 -1078 6883 6451 285 98 0 0 chr2 15991468 15991509 -234696345 + (TA)n Simple_repeat Simple_repeat 1 41 0 260 184 0 0 chr2 15991583 15991661 -234696193 - Alu SINE Alu 0 323 246 796 304 73 72 chr2 15991685 15992383 -234695471 - L1M4 LINE L1 -1723 4423 3722 893 200 65 0 chr2 15992383 15992538 -234695316 - FAM SINE Alu -10 165 1 796 304 73 72 chr2 15992538 15992937 -234694917 - L1M4 LINE L1 -2424 3722 3325 284 289 167 4 chr2 15993083 15993322 -234694532 + L1ME4a LINE L1 5733 6010 -111 264 269 0 15 chr2 15993558 15993625 -234694229 + CT-rich Low_complexity Low_complexity 4 69 0 199 266 239 18 chr2 15993700 15993809 -234694045 - L2 LINE L2 -1 3312 3180 689 214 65 13 chr2 15993844 15993998 -234693856 + MER5A DNA MER1_type 2 163 -26 1488 228 21 9 chr2 15994015 15994340 -234693514 - MER58B DNA MER1_type -1 340 12 681 246 146 80 chr2 15994352 15994778 -234693076 - L3 LINE CR1 -174 1403 950 653 322 118 42 chr2 15994957 15996199 -234691655 + L2 LINE L2 1973 3313 0 228 305 195 0 chr2 15996225 15996307 -234691547 + L2 LINE L2 3159 3256 -16 249 274 14 0 chr2 15996324 15996397 -234691457 + (TGAA)n Simple_repeat Simple_repeat 3 76 0 185 252 46 130 chr2 15996928 15997059 -234690795 - L2 LINE L2 -13 3300 3181 186 133 0 0 chr2 15997953 15997983 -234689871 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 266 343 34 46 chr2 15998961 15999136 -234688718 - MIR SINE MIR -55 207 35 2290 99 0 13 chr2 15999387 15999700 -234688154 + AluY SINE Alu 1 309 -2 3897 189 21 4 chr2 15999795 16000511 -234687343 - L1MB2 LINE L1 -1 6170 5443 3169 244 75 45 chr2 16000873 16002039 -234685815 + L1ME1 LINE L1 3975 5228 -938 2099 132 3 28 chr2 16002039 16002357 -234685497 - AluSx SINE Alu -2 310 1 3169 244 75 45 chr2 16002357 16003320 -234684534 + L1ME1 LINE L1 5228 6161 -5 213 320 90 62 chr2 16003556 16003734 -234684120 + MIR3 SINE MIR 9 191 -17 22 0 0 0 chr2 16003762 16003784 -234684070 + AT_rich Low_complexity Low_complexity 1 22 0 1595 280 114 34 chr2 16004806 16005375 -234682479 - L2 LINE L2 -3 3310 2788 1162 234 167 34 chr2 16005375 16005819 -234682035 - MLT1D LTR MaLR -2 503 1 1595 280 114 34 chr2 16005819 16006401 -234681453 - L2 LINE L2 -525 2788 2057 847 197 80 5 chr2 16007643 16007831 -234680023 - MER20 DNA MER1_type -17 202 1 449 289 24 6 chr2 16007839 16008005 -234679849 + MER5A DNA MER1_type 1 169 -20 343 245 10 29 chr2 16008040 16008142 -234679712 + MER5B DNA MER1_type 18 117 -61 343 162 162 66 chr2 16009132 16009268 -234678586 + LTR50 LTR ERVL 1 149 -646 427 263 149 69 chr2 16009394 16009770 -234678084 + LTR33A LTR ERVL 292 523 0 257 354 71 9 chr2 16009785 16009997 -234677857 - L2 LINE L2 -222 3050 2826 250 330 10 0 chr2 16010161 16010258 -234677596 - L2 LINE L2 -572 2742 2645 200 274 110 0 chr2 16010328 16010401 -234677453 + MIR3 SINE MIR 78 158 -50 2134 97 10 35 chr2 16012083 16012374 -234675480 + AluSq SINE Alu 1 285 -28 180 97 0 0 chr2 16012374 16012405 -234675449 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 2134 97 10 35 chr2 16012405 16012423 -234675431 + AluSq SINE Alu 285 302 -11 300 221 44 15 chr2 16013351 16013419 -234674435 + MIR SINE MIR 84 153 -109 506 316 5 38 chr2 16013620 16013829 -234674025 - MIR SINE MIR -59 203 2 208 362 73 59 chr2 16014705 16014878 -234672976 + L2 LINE L2 2539 2708 -606 1485 173 64 0 chr2 16014878 16015157 -234672697 - AluJb SINE Alu 0 314 20 208 362 73 59 chr2 16015157 16015322 -234672532 + L2 LINE L2 2708 2883 -431 209 359 54 0 chr2 16015594 16015686 -234672168 + L2 LINE L2 3208 3304 -9 258 81 0 0 chr2 16015850 16015887 -234671967 + (TG)n Simple_repeat Simple_repeat 1 37 0 183 273 30 0 chr2 16017697 16017763 -234670091 - MIR3 SINE MIR -41 167 100 198 170 21 21 chr2 16019386 16019433 -234668421 + MIR SINE MIR 86 132 -130 207 0 0 0 chr2 16019487 16019510 -234668344 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2241 108 0 0 chr2 16019521 16019808 -234668046 - AluSx SINE Alu -25 287 1 283 256 85 0 chr2 16020185 16020335 -234667519 + MIR SINE MIR 30 194 -58 1394 107 56 5 chr2 16020475 16020691 -234667163 + MER30 DNA MER1_type 1 227 -3 334 299 8 0 chr2 16022511 16022628 -234665226 - MIR SINE MIR -58 150 33 265 266 6 6 chr2 16023974 16024151 -234663703 + (CATA)n Simple_repeat Simple_repeat 2 178 0 422 286 0 20 chr2 16024153 16024300 -234663554 + (CA)n Simple_repeat Simple_repeat 1 144 0 375 247 0 0 chr2 16024318 16024476 -234663378 + (CA)n Simple_repeat Simple_repeat 1 158 0 22 0 0 0 chr2 16025391 16025413 -234662441 + AT_rich Low_complexity Low_complexity 1 22 0 2481 44 40 0 chr2 16025753 16026051 -234661803 - AluY SINE Alu -1 310 1 814 288 107 36 chr2 16026491 16026904 -234660950 + LTR16A LTR ERVL 4 445 -5 215 59 0 29 chr2 16027338 16027372 -234660482 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 254 289 191 29 chr2 16028259 16028432 -234659422 - MIR3 SINE MIR -3 205 5 3496 126 55 17 chr2 16029072 16029651 -234658203 + MER7C DNA MER2_type 2 602 0 10525 186 39 4 chr2 16029682 16032284 -234655570 + L1MA4A LINE L1 923 3615 -3233 8983 128 6 0 chr2 16032290 16033565 -234654289 + HSMAR1 DNA Mariner 1 1282 -5 10777 172 46 9 chr2 16033570 16034433 -234653421 + L1MA4A LINE L1 3622 4452 -2553 213 39 0 0 chr2 16034433 16034459 -234653395 + (TA)n Simple_repeat Simple_repeat 2 27 0 10777 172 46 9 chr2 16034459 16036860 -234650994 + L1MA4A LINE L1 4452 6997 -8 22 35 0 0 chr2 16036861 16036890 -234650964 + AT_rich Low_complexity Low_complexity 1 29 0 2046 117 10 10 chr2 16036978 16037276 -234650578 + AluSc SINE Alu 3 300 -9 1639 256 157 39 chr2 16037476 16038239 -234649615 - HAL1 LINE L1 -1653 854 2 3210 185 24 26 chr2 16039621 16040041 -234647813 + L1MB3 LINE L1 5497 5917 -266 2139 141 0 0 chr2 16040041 16040345 -234647509 - AluSx SINE Alu -7 305 2 3210 185 24 26 chr2 16040345 16040579 -234647275 + L1MB3 LINE L1 5917 6150 -33 1408 164 13 4 chr2 16040579 16040838 -234647016 + AluJb SINE Alu 50 310 0 272 71 0 0 chr2 16040838 16040880 -234646974 + L1MB4 LINE L1 6139 6180 0 788 191 62 11 chr2 16041598 16041776 -234646078 - MER5A DNA MER1_type 0 189 3 1460 144 104 15 chr2 16042047 16042317 -234645537 + MSTA LTR MaLR 2 295 -133 9530 148 14 22 chr2 16042352 16042854 -234645000 + MSTA-int LTR MaLR 5 510 -1070 207 0 0 0 chr2 16042854 16042877 -234644977 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9530 148 14 22 chr2 16042877 16043957 -234643897 + MSTA-int LTR MaLR 510 1574 -6 1558 180 196 14 chr2 16043963 16044325 -234643529 + MSTA LTR MaLR 1 428 0 2517 87 0 0 chr2 16045000 16045309 -234642545 - AluY SINE Alu -2 309 1 495 311 39 14 chr2 16045540 16045828 -234642026 - L1ME3A LINE L1 -154 5967 5678 443 274 100 66 chr2 16045868 16046419 -234641435 - L1 LINE L1 -1273 4873 4343 2336 103 0 6 chr2 16046419 16046730 -234641124 - AluSq SINE Alu -3 310 2 443 274 100 66 chr2 16046730 16047070 -234640784 - L1 LINE L1 -1803 4343 3943 2261 114 0 0 chr2 16047070 16047376 -234640478 + AluSg SINE Alu 1 306 -4 443 274 100 66 chr2 16047376 16047404 -234640450 - L1 LINE L1 -2203 3943 3917 602 268 150 38 chr2 16047419 16048254 -234639600 - L1 LINE L1 -2479 3667 2740 1901 166 0 22 chr2 16048293 16048606 -234639248 - AluJo SINE Alu -2 310 5 369 298 70 0 chr2 16048915 16049073 -234638781 - L1 LINE L1 -3537 2609 2441 2167 113 0 0 chr2 16049304 16049611 -234638243 - AluSx SINE Alu 0 307 1 21 57 0 0 chr2 16049700 16049735 -234638119 + AT_rich Low_complexity Low_complexity 1 35 0 889 105 0 15 chr2 16049807 16049940 -234637914 + L1PB1 LINE L1 6020 6150 -1 273 86 52 0 chr2 16049947 16050005 -234637849 + (TA)n Simple_repeat Simple_repeat 2 62 0 394 318 78 31 chr2 16050211 16050425 -234637429 - HAL1 LINE L1 -833 1674 1471 2015 88 3 88 chr2 16050425 16050733 -234637121 + AluY SINE Alu 1 282 -29 331 70 0 0 chr2 16050690 16050733 -234637121 + Alu SINE Alu 239 335 0 454 19 0 0 chr2 16050733 16050787 -234637067 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 394 318 78 31 chr2 16050787 16050958 -234636896 - HAL1 LINE L1 -1035 1472 1270 186 43 0 0 chr2 16050992 16051015 -234636839 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2162 107 7 0 chr2 16051017 16051297 -234636557 - AluSp SINE Alu -31 282 1 339 343 28 28 chr2 16051946 16052089 -234635765 + MIR3 SINE MIR 44 186 -22 627 254 50 28 chr2 16053342 16053553 -234634301 - MER20B DNA MER1_type 0 219 1 272 275 61 84 chr2 16053825 16053956 -234633898 + L2 LINE L2 3145 3272 0 275 209 275 0 chr2 16054225 16054316 -234633538 - MER96 DNA MER1_type? -9 166 51 394 297 78 8 chr2 16054361 16054489 -234633365 - MIR SINE MIR -110 152 16 333 267 20 0 chr2 16054500 16054601 -234633253 + MER5C DNA MER1_type 26 128 -196 185 205 103 26 chr2 16054654 16054732 -234633122 + MER5C DNA MER1_type 241 324 0 22 56 0 0 chr2 16054850 16054886 -234632968 + AT_rich Low_complexity Low_complexity 1 36 0 262 191 118 88 chr2 16055108 16055244 -234632610 - L1ME LINE L1 -291 5879 5740 393 224 31 10 chr2 16055248 16055346 -234632508 + LTR41 LTR ERVL 2 101 -672 958 223 125 105 chr2 16055499 16055908 -234631946 + LTR41 LTR ERVL 351 767 -6 500 287 121 24 chr2 16055917 16056770 -234631084 - L1ME LINE L1 -425 5739 4802 617 297 94 5 chr2 16056856 16057068 -234630786 - MIR SINE MIR -31 231 1 522 304 130 4 chr2 16057364 16057587 -234630267 + MIR SINE MIR 2 249 -13 697 264 24 6 chr2 16058286 16058453 -234629401 - MIR SINE MIR -8 254 85 377 274 11 0 chr2 16060724 16060819 -234627035 + MER94 DNA DNA 39 134 0 26 88 0 0 chr2 16061119 16061187 -234626667 + AT_rich Low_complexity Low_complexity 1 68 0 383 293 0 32 chr2 16061341 16061485 -234626369 - L1M4 LINE L1 -1091 5055 4916 757 277 106 43 chr2 16061726 16062452 -234625402 - L1M4 LINE L1 -1404 4742 3971 1559 181 20 3 chr2 16062513 16062811 -234625043 - L1MA4 LINE L1 -20 6280 5978 230 204 20 0 chr2 16062954 16063003 -234624851 + (TATG)n Simple_repeat Simple_repeat 2 51 0 3891 226 167 37 chr2 16063117 16064477 -234623377 - L1MD3 LINE L1 0 7995 6459 1977 139 7 3 chr2 16064630 16064918 -234622936 - AluJb SINE Alu -23 289 1 418 294 14 28 chr2 16065546 16065689 -234622165 + CT-rich Low_complexity Low_complexity 4 144 0 492 297 73 10 chr2 16065692 16065884 -234621970 + MIR SINE MIR 47 250 -12 1825 193 20 50 chr2 16066718 16067118 -234620736 - MLT1B LTR MaLR 0 390 3 246 293 233 13 chr2 16068357 16068507 -234619347 + MIR SINE MIR 15 197 -65 334 282 9 18 chr2 16068513 16068623 -234619231 + MIR SINE MIR 56 164 -98 228 222 139 83 chr2 16068655 16068763 -234619091 + MIR SINE MIR 149 262 0 1249 196 80 3 chr2 16069134 16069260 -234618594 + MER33 DNA MER1_type 1 116 -2469 1826 171 13 3 chr2 16069260 16069564 -234618290 + AluJo SINE Alu 1 307 -5 1249 196 80 3 chr2 16069564 16069738 -234618116 + MER33 DNA MER1_type 116 324 0 286 270 44 80 chr2 16069986 16070123 -234617731 + L2 LINE L2 2919 3050 -222 2141 132 0 28 chr2 16070700 16071019 -234616835 - AluSx SINE Alu -2 310 1 302 324 48 28 chr2 16071504 16071649 -234616205 + HAL1 LINE L1 1287 1434 -1073 2296 105 0 0 chr2 16071736 16072030 -234615824 - AluSq SINE Alu -17 296 3 361 322 25 89 chr2 16072224 16072709 -234615145 + L1ME LINE L1 5316 5769 -352 32 67 0 0 chr2 16072711 16072771 -234615083 + AT_rich Low_complexity Low_complexity 1 60 0 1646 264 90 40 chr2 16073008 16073956 -234613898 - L2 LINE L2 0 3313 2305 2375 111 18 12 chr2 16074198 16074531 -234613323 - L1PA10 LINE L1 -4 6164 5830 509 257 78 5 chr2 16074531 16074749 -234613105 - L1M4 LINE L1 -2753 3393 3160 242 244 64 26 chr2 16074761 16074839 -234613015 + MIR SINE MIR 170 250 -12 271 197 14 56 chr2 16075322 16075393 -234612461 + MER91 DNA MER1_type 73 140 0 643 266 121 8 chr2 16075671 16076043 -234611811 + L1ME4a LINE L1 5705 6118 -3 227 353 134 10 chr2 16076647 16076848 -234611006 + MIR SINE MIR 14 239 -23 363 331 135 0 chr2 16077516 16077694 -234610160 - MIR SINE MIR -16 246 45 189 74 0 0 chr2 16078569 16078596 -234609258 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 215 263 58 73 chr2 16078598 16078735 -234609119 + MIR3 SINE MIR 10 144 -64 317 299 98 17 chr2 16079259 16079433 -234608421 - MER5A DNA MER1_type -1 188 1 187 238 225 0 chr2 16079461 16079541 -234608313 - MIR3 SINE MIR -8 200 103 1510 193 25 0 chr2 16079923 16080198 -234607656 + AluJo SINE Alu 11 292 -20 2174 107 10 3 chr2 16080200 16080498 -234607356 + AluSq SINE Alu 1 300 -13 228 348 115 20 chr2 16080686 16080991 -234606863 + L2 LINE L2 1615 1948 -1366 201 261 60 82 chr2 16080979 16081113 -234606741 + MIR SINE MIR 120 250 -12 * 363 169 0 0 chr2 16081600 16081671 -234606183 + (TG)n Simple_repeat Simple_repeat 1 71 0 275 258 75 21 chr2 16082066 16082159 -234605695 + MIR SINE MIR 50 147 -61 297 307 86 14 chr2 16082173 16082313 -234605541 - L2 LINE L2 -1 3271 3122 405 300 175 41 chr2 16082334 16082901 -234604953 - L2 LINE L2 -823 2491 1849 816 65 0 0 chr2 16083019 16083126 -234604728 + (TTCC)n Simple_repeat Simple_repeat 1 107 0 4606 88 0 5 chr2 16083126 16083725 -234604129 - L1PB1 LINE L1 -13 6138 5543 244 184 0 26 chr2 16087089 16087165 -234600689 + (CA)n Simple_repeat Simple_repeat 2 75 0 441 136 36 28 chr2 16087592 16087851 -234600003 + (CA)n Simple_repeat Simple_repeat 1 261 0 264 115 80 0 chr2 16087915 16088028 -234599826 + (CA)n Simple_repeat Simple_repeat 2 123 0 328 114 57 40 chr2 16088063 16088239 -234599615 + (CA)n Simple_repeat Simple_repeat 2 180 0 504 102 73 0 chr2 16088303 16088556 -234599298 + (CA)n Simple_repeat Simple_repeat 1 271 0 282 124 74 0 chr2 16088572 16088693 -234599161 + (CA)n Simple_repeat Simple_repeat 2 131 0 246 214 51 10 chr2 16088705 16088803 -234599051 + (CA)n Simple_repeat Simple_repeat 1 102 0 248 0 31 0 chr2 16088869 16088901 -234598953 + (CA)n Simple_repeat Simple_repeat 2 34 0 454 230 24 24 chr2 16089135 16089300 -234598554 + (CA)n Simple_repeat Simple_repeat 1 165 0 319 231 57 46 chr2 16089665 16089774 -234598080 + MIR SINE MIR 42 150 -62 22 0 0 0 chr2 16089851 16089873 -234597981 + AT_rich Low_complexity Low_complexity 1 22 0 212 245 0 0 chr2 16090013 16090062 -234597792 + T-rich Low_complexity Low_complexity 1 49 0 288 267 0 13 chr2 16090691 16090766 -234597088 + L2 LINE L2 3198 3271 -1 2272 113 3 0 chr2 16092711 16093020 -234594834 + AluSg SINE Alu 1 310 0 221 208 52 31 chr2 16093477 16093573 -234594281 - L3b LINE CR1 -207 1376 1279 339 217 22 28 chr2 16094027 16094207 -234593647 + (TA)n Simple_repeat Simple_repeat 2 180 0 333 274 219 0 chr2 16094262 16094426 -234593428 - MIR SINE MIR -56 206 7 1368 77 0 0 chr2 16094553 16094723 -234593131 + AluY SINE Alu 130 299 -12 301 226 147 10 chr2 16094853 16094955 -234592899 - L2 LINE L2 -2 3311 3196 379 229 42 2 chr2 16095595 16095710 -234592144 - MIR SINE MIR -62 146 37 237 286 0 0 chr2 16096104 16096167 -234591687 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 247 361 57 25 chr2 16096173 16096331 -234591523 - L2 LINE L2 0 3272 3110 204 313 109 47 chr2 16097142 16097531 -234590323 - L2 LINE L2 -238 3034 2606 266 301 124 9 chr2 16098588 16098701 -234589153 - MIR3 SINE MIR -41 167 42 2061 144 102 3 chr2 16098811 16099164 -234588690 - MLT1B LTR MaLR -2 388 1 300 287 70 38 chr2 16099298 16099455 -234588399 - MIR SINE MIR -49 213 52 203 147 29 0 chr2 16101121 16101155 -234586699 + L2 LINE L2 3255 3289 -24 352 268 130 7 chr2 16101307 16101445 -234586409 + MIR SINE MIR 104 258 -4 231 359 35 47 chr2 16103306 16103476 -234584378 - MIR SINE MIR -70 192 25 210 220 0 0 chr2 16103561 16103620 -234584234 + (CAT)n Simple_repeat Simple_repeat 1 59 0 867 183 0 0 chr2 16103669 16103849 -234584005 + (CAT)n Simple_repeat Simple_repeat 1 180 0 559 71 24 0 chr2 16104363 16104447 -234583407 - L1PB2 LINE L1 -3 6148 6063 857 244 62 0 chr2 16104601 16104810 -234583044 + MER58A DNA MER1_type 3 224 0 2853 253 107 75 chr2 16104816 16105474 -234582380 + L2 LINE L2 1486 2122 -1191 915 203 184 44 chr2 16105474 16105794 -234582060 - MLT1A1 LTR MaLR 0 365 1 2853 253 107 75 chr2 16105794 16106911 -234580943 + L2 LINE L2 2122 3313 0 302 352 49 6 chr2 16107426 16107588 -234580266 + MIR SINE MIR 23 191 -71 180 278 151 48 chr2 16108001 16108127 -234579727 - MIR3 SINE MIR -68 140 2 2367 85 7 3 chr2 16108186 16108493 -234579361 + AluSq SINE Alu 1 308 -5 820 174 29 17 chr2 16108538 16108710 -234579144 + MLT1A1 LTR MaLR 3 176 -189 2854 178 11 15 chr2 16108930 16109465 -234578389 - L1MA6 LINE L1 -6 6294 5762 387 225 83 138 chr2 16109470 16109638 -234578216 - L2 LINE L2 -7 3306 3163 1926 148 7 0 chr2 16109638 16109922 -234577932 + AluSx SINE Alu 1 286 -26 387 225 83 138 chr2 16109922 16110078 -234577776 - L2 LINE L2 -150 3163 3000 21 36 0 0 chr2 16110078 16110106 -234577748 + AT_rich Low_complexity Low_complexity 1 28 0 253 331 41 8 chr2 16110224 16110345 -234577509 - L3 LINE CR1 -142 1435 1311 806 262 99 60 chr2 16110345 16110727 -234577127 + MLT1J2 LTR MaLR 1 397 -53 223 241 17 17 chr2 16111043 16111101 -234576753 + L2 LINE L2 3215 3272 0 2586 44 0 19 chr2 16112921 16113238 -234574616 - AluY SINE Alu 0 311 1 185 116 43 101 chr2 16113291 16113360 -234574494 - L2 LINE L2 -95 3218 3154 432 323 80 67 chr2 16113708 16114338 -234573516 - L2 LINE L2 -39 3233 2542 480 321 96 65 chr2 16114338 16115102 -234572752 + L1M4 LINE L1 4134 4920 -1226 194 308 93 9 chr2 16116759 16116866 -234570988 - MIR SINE MIR -13 249 134 579 246 153 5 chr2 16117677 16117880 -234569974 - MLT1L LTR MaLR -339 276 44 256 324 0 0 chr2 16118168 16118239 -234569615 - MIR SINE MIR -132 130 60 1618 229 106 1 chr2 16118291 16118752 -234569102 - MLT1F1 LTR MaLR 0 542 1 273 341 64 70 chr2 16121902 16122260 -234565594 - L2 LINE L2 0 3272 2917 400 228 343 14 chr2 16122577 16122796 -234565058 - MER5C DNA MER1_type -2 322 32 256 335 130 31 chr2 16123488 16123716 -234564138 + L2 LINE L2 2077 2281 -1033 2327 195 71 25 chr2 16123716 16124197 -234563657 + MLT1D LTR MaLR 3 505 0 256 335 130 31 chr2 16124197 16124353 -234563501 + L2 LINE L2 2281 2499 -815 183 288 68 14 chr2 16124376 16124449 -234563405 + L2 LINE L2 2764 2840 -474 318 313 102 54 chr2 16124529 16124823 -234563031 + L2 LINE L2 2956 3263 -9 363 245 43 0 chr2 16125060 16125154 -234562700 - MIR SINE MIR 0 262 165 646 252 7 0 chr2 16125244 16125383 -234562471 - MIR SINE MIR -120 142 3 266 323 100 8 chr2 16125451 16125581 -234562273 - L2 LINE L2 0 3313 3172 252 366 29 23 chr2 16126251 16126423 -234561431 + MIR SINE MIR 47 219 -43 223 178 0 0 chr2 16126527 16126572 -234561282 - L2 LINE L2 0 3313 3269 225 269 32 65 chr2 16127122 16127215 -234560639 + MIR SINE MIR 118 207 -55 1548 187 92 38 chr2 16127245 16127614 -234560240 - MLT1B LTR MaLR -1 389 1 1286 265 98 70 chr2 16129304 16129604 -234558250 - HAL1 LINE L1 -21 2486 2196 834 244 60 5 chr2 16129604 16129805 -234558049 + MER58C DNA MER1_type 3 214 -1 1286 265 98 70 chr2 16129805 16130443 -234557411 - HAL1 LINE L1 -311 2196 1522 404 351 176 28 chr2 16130546 16130933 -234556921 - HAL1 LINE L1 -1757 750 307 195 266 153 95 chr2 16131249 16131490 -234556364 - L2 LINE L2 -4 3268 3014 469 299 48 39 chr2 16131735 16131966 -234555888 - MIR SINE MIR -25 237 5 268 310 136 11 chr2 16133065 16133249 -234554605 - MIR SINE MIR -16 246 40 207 0 0 0 chr2 16134010 16134033 -234553821 + (TA)n Simple_repeat Simple_repeat 1 23 0 2103 123 0 13 chr2 16134034 16134342 -234553512 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr2 16134469 16134493 -234553361 + AT_rich Low_complexity Low_complexity 1 24 0 399 294 94 71 chr2 16135290 16135630 -234552224 + L2 LINE L2 2907 3254 -18 255 323 10 0 chr2 16135815 16135914 -234551940 - MER117 DNA MER1_type -96 101 2 323 265 7 143 chr2 16136739 16136886 -234550968 - MER91C DNA MER1_type -13 127 1 27 62 0 0 chr2 16137101 16137149 -234550705 + AT_rich Low_complexity Low_complexity 1 48 0 1179 242 5 96 chr2 16137234 16137631 -234550223 - MLT1A2 LTR MaLR -13 361 1 506 288 50 3 chr2 16137678 16137882 -234549972 + MLT1F1 LTR MaLR 7 285 -282 354 259 83 102 chr2 16138172 16138485 -234549369 + MLT1F-int LTR MaLR 1028 1334 -37 1842 248 100 22 chr2 16138500 16139000 -234548854 + MLT1F LTR MaLR 4 542 0 304 305 49 37 chr2 16139083 16139247 -234548607 + MIR3 SINE MIR 24 189 -19 454 234 27 98 chr2 16139524 16139661 -234548193 + MIR SINE MIR 42 164 -98 1725 155 67 67 chr2 16139661 16139993 -234547861 + THE1C LTR MaLR 1 335 -40 2236 125 3 0 chr2 16139993 16140297 -234547557 - AluSq SINE Alu -8 305 1 1725 155 67 67 chr2 16140297 16140339 -234547515 + THE1C LTR MaLR 334 375 0 454 234 27 98 chr2 16140339 16140385 -234547469 + MIR SINE MIR 164 212 -50 203 286 92 107 chr2 16140848 16141054 -234546800 + L2 LINE L2 2994 3196 -76 2847 10 0 0 chr2 16141088 16141395 -234546459 - AluYa5 SINE Alu -4 307 1 222 191 0 0 chr2 16141429 16141476 -234546378 + GA-rich Low_complexity Low_complexity 2 48 0 263 272 136 0 chr2 16141591 16141672 -234546182 - MIR SINE MIR -105 157 66 2950 41 0 9 chr2 16142194 16142536 -234545318 - L1PA5 LINE L1 -2 6152 5814 355 333 41 10 chr2 16142562 16142757 -234545097 + L2 LINE L2 2148 2348 -966 185 318 71 12 chr2 16142916 16143001 -234544853 - MIR SINE MIR -79 129 40 208 235 0 0 chr2 16143256 16143307 -234544547 + (CAA)n Simple_repeat Simple_repeat 1 51 0 243 0 0 0 chr2 16144047 16144074 -234543780 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 187 247 63 134 chr2 16144397 16144620 -234543234 + MIR SINE MIR 47 253 -9 278 264 103 70 chr2 16144756 16144929 -234542925 + MLT1J LTR MaLR 1 156 -294 556 145 0 103 chr2 16145050 16145159 -234542695 + MLT1J LTR MaLR 339 458 -53 2100 110 0 0 chr2 16145159 16145471 -234542383 + AluY SINE Alu 1 312 0 1998 134 20 0 chr2 16145474 16145772 -234542082 + AluSq SINE Alu 1 304 -9 556 145 0 103 chr2 16145772 16145802 -234542052 + MLT1J LTR MaLR 460 468 -43 338 308 51 8 chr2 16146365 16146482 -234541372 - L2 LINE L2 -1 3312 3191 189 273 68 0 chr2 16146546 16146590 -234541264 - L2 LINE L2 -75 3197 3151 233 366 99 30 chr2 16147765 16147896 -234539958 + L2 LINE L2 2600 2739 -575 293 338 51 13 chr2 16148558 16148715 -234539139 - MIR SINE MIR -65 197 35 240 269 30 30 chr2 16148715 16148782 -234539072 + L2 LINE L2 3232 3298 -15 472 287 100 32 chr2 16148884 16149382 -234538472 - L1ME4a LINE L1 -70 6051 5520 887 260 79 62 chr2 16149513 16149987 -234537867 - L1ME LINE L1 -549 5684 5192 2204 121 0 3 chr2 16149987 16150284 -234537570 + AluSc SINE Alu 1 296 -13 887 260 79 62 chr2 16150284 16150428 -234537426 - L1ME LINE L1 -1041 5192 5052 * 1166 270 31 47 chr2 16150426 16151097 -234536757 - L1MEc LINE L1 -3467 2748 2116 3089 260 56 55 chr2 16151135 16151260 -234536594 - L1MEc LINE L1 -4451 1945 1822 1672 174 24 17 chr2 16151260 16151553 -234536301 - AluJb SINE Alu -17 295 1 3089 260 56 55 chr2 16151553 16152353 -234535501 - L1MEc LINE L1 -4574 1822 1024 1822 134 76 10 chr2 16152353 16152644 -234535210 - AluSg SINE Alu 0 310 1 3089 260 56 55 chr2 16152644 16153605 -234534249 - L1MEc LINE L1 -5372 1024 37 242 271 0 0 chr2 16153606 16153665 -234534189 + MER5B DNA MER1_type 115 173 -5 323 303 86 45 chr2 16153679 16153904 -234533950 - L1ME4a LINE L1 -639 5482 5271 1683 172 72 19 chr2 16153906 16154226 -234533628 - MER44D DNA MER2_type 0 609 3 1888 156 175 80 chr2 16154693 16154775 -234533079 - MLT2B1 LTR ERVL 0 520 447 316 21 62 0 chr2 16154775 16154823 -234533031 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1888 156 175 80 chr2 16154823 16155215 -234532639 - MLT2B1 LTR ERVL -73 447 1 497 243 41 93 chr2 16155611 16155879 -234531975 - L1MCb LINE L1 -5471 574 321 373 328 8 15 chr2 16157551 16157682 -234530172 + MIR SINE MIR 17 146 -62 201 247 43 0 chr2 16159079 16159146 -234528708 - MIR SINE MIR -80 182 113 207 373 0 13 chr2 16159260 16159335 -234528519 + MIR3 SINE MIR 15 88 -120 406 338 63 34 chr2 16159400 16159669 -234528185 + L2 LINE L2 2608 2884 -430 206 329 0 55 chr2 16159995 16160068 -234527786 + L2 LINE L2 3245 3313 0 395 237 44 0 chr2 16161035 16161149 -234526705 + MIR SINE MIR 61 179 -83 377 276 41 0 chr2 16161347 16161445 -234526409 - MER94 DNA DNA -32 102 1 215 248 214 17 chr2 16162229 16162346 -234525508 + MIR3 SINE MIR 62 201 -7 264 240 177 0 chr2 16162514 16162610 -234525244 + L2 LINE L2 3201 3313 0 402 206 14 0 chr2 16162835 16162908 -234524946 + MER2 DNA MER2_type 1 74 -271 5297 140 18 13 chr2 16163732 16164568 -234523286 + L1MC1 LINE L1 5494 6333 0 248 296 169 12 chr2 16165865 16166037 -234521817 - MIR SINE MIR -4 258 60 2358 181 91 44 chr2 16166120 16166555 -234521299 + MLT2B1 LTR ERVL 1 463 -57 279 114 0 0 chr2 16166555 16166599 -234521255 + (TG)n Simple_repeat Simple_repeat 1 44 0 2358 181 91 44 chr2 16166599 16166660 -234521194 + MLT2B1 LTR ERVL 463 520 0 2304 107 7 0 chr2 16166927 16167236 -234520618 + AluSx SINE Alu 1 311 -1 213 355 71 12 chr2 16167689 16167858 -234519996 - MIR SINE MIR 0 262 84 209 303 56 63 chr2 16168591 16168733 -234519121 + MIR SINE MIR 52 192 -70 1909 204 52 12 chr2 16169200 16169601 -234518253 - MSTB LTR MaLR -2 424 8 2117 258 65 21 chr2 16170466 16171141 -234516713 - MER20B DNA MER1_type -14 769 65 370 254 29 43 chr2 16173203 16173341 -234514513 - L1ME LINE L1 -393 5728 5593 308 334 116 36 chr2 16174743 16175083 -234512771 + L2 LINE L2 2624 2997 -275 2008 135 28 0 chr2 16175521 16175810 -234512044 - AluSx SINE Alu -15 297 1 184 261 22 0 chr2 16177372 16177418 -234510436 + L2 LINE L2 3267 3313 0 202 352 0 11 chr2 16177665 16177753 -234510101 + L3 LINE CR1 1289 1375 -202 1932 271 110 27 chr2 16177787 16178495 -234509359 + LTR41 LTR ERVL 1 767 -6 27 29 0 0 chr2 16178828 16178862 -234508992 + AT_rich Low_complexity Low_complexity 1 34 0 493 273 182 16 chr2 16178873 16179060 -234508794 - MIR SINE MIR -16 246 29 268 357 77 58 chr2 16179788 16180113 -234507741 + L2 LINE L2 2942 3272 0 343 368 7 0 chr2 16180148 16180284 -234507570 + MIR3 SINE MIR 72 208 0 2076 150 16 0 chr2 16180901 16181273 -234506581 - AluSx SINE Alu 0 377 1 326 227 30 0 chr2 16181656 16181722 -234506132 - MIR SINE MIR -68 140 73 21 0 0 0 chr2 16182191 16182212 -234505642 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 16182962 16183002 -234504852 + AT_rich Low_complexity Low_complexity 1 40 0 315 274 55 62 chr2 16183083 16183229 -234504625 - HAL1 LINE L1 -740 1767 1623 610 249 67 79 chr2 16183245 16183324 -234504530 - HAL1 LINE L1 -976 1531 1453 195 42 0 0 chr2 16183324 16183348 -234504506 + (TC)n Simple_repeat Simple_repeat 1 24 0 610 249 67 79 chr2 16183348 16183482 -234504372 - HAL1 LINE L1 -1054 1453 1319 2034 73 0 22 chr2 16183482 16183754 -234504100 + AluY SINE Alu 1 266 -45 610 249 67 79 chr2 16183754 16184046 -234503808 - HAL1 LINE L1 -1188 1319 1031 22 70 0 0 chr2 16184063 16184106 -234503748 + AT_rich Low_complexity Low_complexity 1 43 0 1292 199 81 75 chr2 16185048 16185420 -234502434 - MLT1A2 LTR MaLR 0 374 1 6830 87 19 0 chr2 16185471 16186595 -234501259 + L1PA14 LINE L1 5023 6159 -2 22 0 0 0 chr2 16186705 16186727 -234501127 + AT_rich Low_complexity Low_complexity 1 22 0 267 300 153 40 chr2 16187772 16187922 -234499932 - MIR3 SINE MIR -23 185 19 1204 256 52 59 chr2 16187953 16188411 -234499443 + L2 LINE L2 2804 3258 -55 281 317 48 75 chr2 16189259 16189445 -234498409 + MIR3 SINE MIR 25 205 -3 183 355 32 0 chr2 16189793 16189886 -234497968 + L2 LINE L2 2942 3037 -235 330 265 151 52 chr2 16191197 16191333 -234496521 - MIR3 SINE MIR -53 155 4 327 298 115 25 chr2 16191413 16191648 -234496206 - LTR33 LTR ERVL -67 454 199 470 233 17 0 chr2 16191681 16191801 -234496053 - LTR33 LTR ERVL -387 134 13 5039 94 5 6 chr2 16192059 16192727 -234495127 - L1PA13 LINE L1 -2 6161 5495 890 276 124 49 chr2 16193836 16194597 -234493257 + L2 LINE L2 2448 3313 0 198 246 70 18 chr2 16194788 16194845 -234493009 + MIR SINE MIR 107 166 -96 247 270 0 0 chr2 16195236 16195299 -234492555 + MIR SINE MIR 161 223 -39 414 335 62 22 chr2 16195861 16196085 -234491769 - MIR SINE MIR -10 252 20 227 308 62 0 chr2 16196331 16196396 -234491458 + MIR3 SINE MIR 116 184 -24 1728 176 43 54 chr2 16196745 16197114 -234490740 - MLT1A1 LTR MaLR 0 365 1 2744 208 75 61 chr2 16197575 16198492 -234489362 - MER63C DNA MER1_type 0 930 1 328 303 55 35 chr2 16199133 16199278 -234488576 - MIR SINE MIR -16 246 99 1917 139 17 7 chr2 16199278 16199579 -234488275 - AluSx SINE Alu -8 304 1 197 154 0 90 chr2 16249983 16250054 -234437800 + MIR SINE MIR 96 142 -66 226 358 28 45 chr2 16250660 16250805 -234437049 + MIR SINE MIR 7 150 -112 1214 277 107 2 chr2 16250805 16251198 -234436656 - MER57B LTR ERV1 0 434 1 226 358 28 45 chr2 16251198 16251228 -234436626 + MIR SINE MIR 150 179 -83 1635 142 52 10 chr2 16251541 16251830 -234436024 - AluSx SINE Alu -11 301 1 186 43 0 0 chr2 16251960 16251983 -234435871 + (CAAT)n Simple_repeat Simple_repeat 3 25 0 21 36 0 0 chr2 16252547 16252575 -234435279 + GC_rich Low_complexity Low_complexity 1 28 0 3421 96 19 74 chr2 16252625 16254286 -234433568 + SVA Other Other 393 1077 -309 236 68 0 45 chr2 16254799 16254843 -234433011 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 185 196 78 0 chr2 16255517 16255568 -234432286 - L3 LINE CR1 -1239 338 284 3260 85 16 5 chr2 16255595 16256032 -234431822 - MLT2A1 LTR ERVL 0 444 3 1276 220 10 0 chr2 16256034 16256330 -234431524 - HERVL-A1 LTR ERVL 0 5654 5356 678 311 135 50 chr2 16256528 16257241 -234430613 - L1 LINE L1 -2368 3778 3006 499 266 40 28 chr2 16257614 16257791 -234430063 + MLT1A2 LTR MaLR 1 179 -195 21 0 0 0 chr2 16257882 16257903 -234429951 + GC_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 16257956 16257981 -234429873 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 16258033 16258054 -234429800 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 16258082 16258105 -234429749 + GC_rich Low_complexity Low_complexity 1 23 0 296 29 0 0 chr2 16258217 16258251 -234429603 + (G)n Simple_repeat Simple_repeat 1 34 0 412 197 0 22 chr2 16258546 16258683 -234429171 + CT-rich Low_complexity Low_complexity 1 134 0 1626 158 217 17 chr2 16259611 16260016 -234427838 - MER51A LTR ERV1 -148 486 1 210 118 0 0 chr2 16260402 16260436 -234427418 + (TG)n Simple_repeat Simple_repeat 1 34 0 1895 119 58 7 chr2 16261047 16261324 -234426530 - AluSx SINE Alu -20 292 2 622 286 112 24 chr2 16261327 16261847 -234426007 - L2 LINE L2 -161 3152 2596 219 344 31 47 chr2 16263580 16263708 -234424146 + MIR3 SINE MIR 44 169 -39 2069 125 3 26 chr2 16265594 16265897 -234421957 - AluSx SINE Alu -16 296 1 354 333 36 18 chr2 16266567 16266735 -234421119 + MIR SINE MIR 79 249 -13 204 352 0 28 chr2 16267383 16267454 -234420400 + MIR SINE MIR 60 128 -80 305 241 0 0 chr2 16267467 16267525 -234420329 + L2 LINE L2 2917 2974 -340 296 282 51 0 chr2 16267662 16267740 -234420114 + L2 LINE L2 3230 3311 -2 * 446 368 90 16 chr2 16267731 16268052 -234419802 - L3 LINE CR1 -317 1260 916 447 317 68 16 chr2 16268094 16268343 -234419511 - MIR SINE MIR 0 262 1 182 276 41 92 chr2 16268541 16268639 -234419215 - MIR3 SINE MIR -5 203 111 360 0 0 0 chr2 16268898 16268938 -234418916 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 286 157 14 chr2 16268988 16269058 -234418796 + L2 LINE L2 3155 3234 -38 2217 102 0 23 chr2 16269078 16269382 -234418472 + AluSc SINE Alu 1 297 -12 222 198 49 0 chr2 16270332 16270413 -234417441 + GA-rich Low_complexity Low_complexity 4 88 0 2513 126 3 3 chr2 16270789 16271153 -234416701 + THE1B LTR MaLR 1 364 0 250 304 59 39 chr2 16271444 16271546 -234416308 - MIR SINE MIR -2 260 157 409 203 326 14 chr2 16273118 16273256 -234414598 + MER5A DNA MER1_type 9 189 0 198 333 0 0 chr2 16273460 16273517 -234414337 - MIR SINE MIR -17 245 189 211 239 55 92 chr2 16273575 16273684 -234414170 + MIR3 SINE MIR 104 208 0 645 306 6 0 chr2 16274736 16274919 -234412935 - MIR SINE MIR 0 262 79 259 248 248 8 chr2 16275832 16275957 -234411897 - MIR3 SINE MIR -21 187 33 232 364 0 0 chr2 16276718 16276784 -234411070 + L3 LINE CR1 1399 1464 -113 284 291 136 0 chr2 16276971 16277081 -234410773 + MIR3 SINE MIR 14 138 -70 317 225 11 0 chr2 16277265 16277354 -234410500 + (CATA)n Simple_repeat Simple_repeat 3 92 0 240 157 0 20 chr2 16277360 16277411 -234410443 + LTR66 LTR ERVL 390 439 -171 451 302 68 64 chr2 16277872 16278167 -234409687 + L2 LINE L2 2974 3269 -3 379 289 82 86 chr2 16278866 16279181 -234408673 + L2 LINE L2 2957 3270 -2 738 297 103 62 chr2 16279563 16280031 -234407823 + L2 LINE L2 2827 3313 0 402 325 30 54 chr2 16280575 16280778 -234407076 - MIR SINE MIR -60 202 5 457 278 69 35 chr2 16282105 16282278 -234405576 - MIR3 SINE MIR 0 208 30 186 43 0 0 chr2 16282606 16282629 -234405225 + (TC)n Simple_repeat Simple_repeat 2 24 0 281 309 118 18 chr2 16284967 16285077 -234402777 - MIR SINE MIR -57 151 31 941 277 22 0 chr2 16285413 16285644 -234402210 - MIR SINE MIR 0 262 27 297 314 151 5 chr2 16286170 16286355 -234401499 - MIR SINE MIR 0 262 51 632 250 0 0 chr2 16286573 16286705 -234401149 + MER94 DNA DNA 1 132 -2 454 314 54 54 chr2 16288063 16288321 -234399533 - MIR SINE MIR -1 261 4 251 250 29 128 chr2 16289014 16289186 -234398668 + MIR SINE MIR 46 201 -61 215 298 183 29 chr2 16289595 16289699 -234398155 + MIR SINE MIR 113 232 -30 206 196 18 54 chr2 16290105 16290161 -234397693 + MIR3 SINE MIR 11 64 -144 301 283 9 38 chr2 16290380 16290486 -234397368 + MIR SINE MIR 33 136 -72 1101 148 188 64 chr2 16291407 16291680 -234396174 - AluSg SINE Alu 0 305 2 349 344 101 16 chr2 16291685 16291874 -234395980 + L2 LINE L2 2594 2798 -516 187 409 32 0 chr2 16291910 16292003 -234395851 - MIR3 SINE MIR -102 106 11 275 265 48 0 chr2 16292192 16292275 -234395579 - MIR SINE MIR -71 191 105 197 311 19 19 chr2 16292298 16292401 -234395453 + L2 LINE L2 2248 2350 -964 819 228 10 35 chr2 16292748 16292950 -234394904 - MER63A DNA MER1_type -13 197 1 387 245 113 6 chr2 16292966 16293093 -234394761 + MIR SINE MIR 24 160 -68 707 186 96 51 chr2 16293112 16293289 -234394565 + MER20 DNA MER1_type 35 219 0 231 343 15 0 chr2 16293445 16293512 -234394342 + L2 LINE L2 3204 3271 -1 245 391 22 17 chr2 16294434 16294613 -234393241 - MIR3 SINE MIR -16 192 13 1191 170 0 5 chr2 16294812 16295000 -234392854 + AluJb SINE Alu 120 306 -6 1645 201 19 35 chr2 16295249 16295618 -234392236 + MLT1A1 LTR MaLR 3 365 0 371 272 69 9 chr2 16295787 16295922 -234391932 - MIR3 SINE MIR -38 170 15 184 279 40 100 chr2 16296320 16296621 -234391233 - L2 LINE L2 -146 3126 2844 246 244 79 71 chr2 16296825 16296952 -234390902 + MIR SINE MIR 70 197 -65 23 33 0 0 chr2 16297961 16297991 -234389863 + AT_rich Low_complexity Low_complexity 1 30 0 2476 276 138 12 chr2 16299831 16300954 -234386900 + L2 LINE L2 1901 3153 -160 310 266 130 34 chr2 16300963 16301170 -234386684 - L1MCa LINE L1 -4305 2121 1895 348 216 0 54 chr2 16301176 16301250 -234386604 + L2 LINE L2 3244 3313 0 254 235 118 15 chr2 16301896 16301964 -234385890 + L2 LINE L2 3193 3267 -5 301 383 52 7 chr2 16302082 16302236 -234385618 + MIR SINE MIR 90 250 -12 313 357 48 18 chr2 16303347 16303515 -234384339 + MIR SINE MIR 90 262 0 227 288 0 30 chr2 16304103 16304169 -234383685 + MIR3 SINE MIR 104 167 -41 2207 196 58 58 chr2 16304615 16305135 -234382719 + MLT2B1 LTR ERVL 1 520 0 496 35 0 0 chr2 16305135 16305192 -234382662 - ERVL LTR ERVL -3207 2557 2501 351 322 21 70 chr2 16305573 16305846 -234382008 + L2 LINE L2 2795 3064 -249 703 207 7 8 chr2 16305998 16306151 -234381703 - MIR SINE MIR -49 213 63 229 316 34 60 chr2 16306728 16306845 -234381009 - L2 LINE L2 -11 3302 3189 1102 209 88 4 chr2 16307002 16307275 -234380579 - MER2 DNA MER2_type -1 344 49 349 296 0 18 chr2 16307594 16307763 -234380091 + (CAGTA)n Simple_repeat Simple_repeat 3 168 0 385 278 73 69 chr2 16307896 16308184 -234379670 + MLT1I LTR MaLR 98 386 -23 250 335 63 31 chr2 16311034 16311225 -234376629 - L2 LINE L2 -24 3248 3052 * 1437 229 64 60 chr2 16311210 16311709 -234376145 + L2 LINE L2 2813 3313 0 23 33 0 0 chr2 16312485 16312515 -234375339 + AT_rich Low_complexity Low_complexity 1 30 0 191 324 77 77 chr2 16312563 16312785 -234375069 + MIR SINE MIR 32 253 -9 436 282 58 6 chr2 16313310 16313466 -234374388 - MIR3 SINE MIR -29 179 16 283 245 6 6 chr2 16314165 16314324 -234373530 + (CA)n Simple_repeat Simple_repeat 2 160 0 208 173 0 19 chr2 16315459 16315511 -234372343 + T-rich Low_complexity Low_complexity 2 52 0 519 218 57 0 chr2 16315687 16315811 -234372043 - MER46C DNA MER2_type -1 337 207 357 193 136 11 chr2 16315875 16315963 -234371891 - MER46C DNA MER2_type -233 105 7 279 252 179 53 chr2 16316399 16316550 -234371304 - MIR SINE MIR -61 201 32 348 167 20 39 chr2 16316654 16316756 -234371098 + T-rich Low_complexity Low_complexity 1 100 0 423 303 1 16 chr2 16317250 16317399 -234370455 + MIR SINE MIR 6 151 -62 286 267 44 22 chr2 16318172 16318262 -234369592 - MIR3 SINE MIR -6 202 111 322 222 171 34 chr2 16318524 16318641 -234369213 + L2 LINE L2 3138 3270 -2 1737 148 30 0 chr2 16319027 16319297 -234368557 + AluJb SINE Alu 27 304 -8 448 275 77 2 chr2 16319764 16319918 -234367936 + MIR SINE MIR 28 187 -62 381 352 105 18 chr2 16320326 16320545 -234367309 - MIR SINE MIR -24 238 1 255 356 67 48 chr2 16320801 16321009 -234366845 + L2 LINE L2 3061 3272 0 259 235 63 0 chr2 16321255 16321329 -234366525 - MIR SINE MIR -56 152 86 429 279 57 0 chr2 16321982 16322104 -234365750 + MIR SINE MIR 84 212 -50 314 182 0 81 chr2 16323675 16323853 -234364001 + (CCCCG)n Simple_repeat Simple_repeat 1 163 0 318 67 0 0 chr2 16323870 16323915 -234363939 + (CCCCG)n Simple_repeat Simple_repeat 5 49 0 25 51 0 0 chr2 16323917 16323956 -234363898 + GC_rich Low_complexity Low_complexity 1 39 0 2248 107 0 3 chr2 16325077 16325376 -234362478 - AluSg SINE Alu -9 301 4 411 21 0 0 chr2 16325450 16325498 -234362356 + (CA)n Simple_repeat Simple_repeat 2 49 0 276 331 183 0 chr2 16327005 16327147 -234360707 + MIR SINE MIR 19 186 -76 183 42 0 0 chr2 16327192 16327216 -234360638 + (TG)n Simple_repeat Simple_repeat 1 24 0 268 378 21 34 chr2 16327714 16327947 -234359907 + L2 LINE L2 2864 3093 -179 3211 198 30 24 chr2 16328013 16328363 -234359491 + MER82 DNA MER2_type 1 358 -295 2154 107 0 7 chr2 16328363 16328653 -234359201 - AluSc SINE Alu -21 288 1 3211 198 30 24 chr2 16328653 16328929 -234358925 + MER82 DNA MER2_type 358 631 -22 318 347 7 67 chr2 16328944 16329094 -234358760 + L2 LINE L2 3132 3272 0 265 341 15 44 chr2 16329545 16329680 -234358174 + MIR SINE MIR 46 176 -86 229 204 0 0 chr2 16329678 16329722 -234358132 - L2 LINE L2 -5 3308 3265 * 2858 132 9 21 chr2 16329793 16330225 -234357629 - MSTA LTR MaLR -1 427 1 213 264 110 33 chr2 16330661 16330752 -234357102 - MIR SINE MIR -79 129 32 23 33 0 0 chr2 16331101 16331131 -234356723 + AT_rich Low_complexity Low_complexity 1 30 0 396 344 152 23 chr2 16331257 16331652 -234356202 + L2 LINE L2 2522 2967 -347 636 221 27 17 chr2 16332600 16332772 -234355082 - MIR3 SINE MIR -11 197 23 283 329 53 48 chr2 16333026 16333233 -234354621 + MIR SINE MIR 12 219 -43 221 56 0 28 chr2 16333352 16333388 -234354466 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 307 206 118 14 chr2 16333904 16334053 -234353801 + MLT1J2 LTR MaLR 25 182 -227 403 279 78 60 chr2 16334380 16335080 -234352774 - L1ME LINE L1 -552 5601 4889 285 86 0 0 chr2 16335224 16335259 -234352595 - U2 snRNA snRNA -153 35 1 186 219 21 10 chr2 16335324 16335420 -234352434 + (TA)n Simple_repeat Simple_repeat 2 98 0 738 302 61 44 chr2 16335523 16335817 -234352037 - L1ME LINE L1 -1618 4511 4223 958 287 5 0 chr2 16335817 16336040 -234351814 + MER58A DNA MER1_type 1 224 0 738 302 61 44 chr2 16336040 16336467 -234351387 - L1ME LINE L1 -1906 4223 3778 343 323 115 79 chr2 16336522 16336867 -234350987 - L1ME LINE L1 -5357 762 431 1907 144 13 17 chr2 16336867 16337166 -234350688 - AluSx SINE Alu -14 298 1 343 323 115 79 chr2 16337166 16337517 -234350337 - L1ME LINE L1 -5688 431 41 371 245 38 9 chr2 16338870 16338976 -234348878 + MIR SINE MIR 25 133 -75 201 303 13 0 chr2 16339361 16339437 -234348417 + L3 LINE CR1 1301 1377 -200 6650 37 0 3 chr2 16339544 16340294 -234347560 - L1PA4 LINE L1 0 6155 5408 263 85 21 0 chr2 16342621 16342668 -234345186 + (CA)n Simple_repeat Simple_repeat 1 48 0 982 177 0 0 chr2 16342792 16342950 -234344904 + AluJb SINE Alu 133 290 -22 862 106 7 7 chr2 16343650 16343792 -234344062 + (TTTC)n Simple_repeat Simple_repeat 4 145 0 222 91 0 0 chr2 16345685 16345718 -234342136 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 199 308 13 51 chr2 16345830 16345908 -234341946 + L3 LINE CR1 1392 1466 -111 303 267 174 31 chr2 16346120 16346281 -234341573 - MER20 DNA MER1_type -1 218 35 223 318 91 31 chr2 16346634 16346764 -234341090 + MIR SINE MIR 34 171 -68 2334 92 0 0 chr2 16346831 16347125 -234340729 + AluY SINE Alu 1 294 -17 1960 225 86 45 chr2 16347294 16347890 -234339964 - MLT1E2 LTR MaLR -6 620 1 271 336 38 38 chr2 16348115 16348353 -234339501 + HAL1 LINE L1 1423 1660 -847 22 56 0 0 chr2 16348544 16348580 -234339274 + AT_rich Low_complexity Low_complexity 1 36 0 348 303 38 57 chr2 16349095 16349306 -234338548 + L1M4 LINE L1 2328 2534 -3612 302 51 0 0 chr2 16349910 16349949 -234337905 + L1ME3A LINE L1 6124 6162 -8 22 0 0 0 chr2 16350370 16350392 -234337462 + AT_rich Low_complexity Low_complexity 1 22 0 305 47 23 0 chr2 16350702 16350745 -234337109 + (CA)n Simple_repeat Simple_repeat 1 44 0 302 294 130 23 chr2 16351341 16351603 -234336251 + L1M4 LINE L1 4400 4689 -1457 351 289 123 22 chr2 16352621 16352898 -234334956 - L1M4 LINE L1 -2634 3512 3208 22 0 0 0 chr2 16352908 16352930 -234334924 + AT_rich Low_complexity Low_complexity 1 22 0 7003 164 16 24 chr2 16352946 16354003 -234333851 - L1PB3 LINE L1 0 6154 5090 2792 102 3 0 chr2 16354003 16354357 -234333497 + THE1A LTR MaLR 1 355 0 7003 164 16 24 chr2 16354357 16354733 -234333121 - L1PB3 LINE L1 -1064 5090 4712 2433 138 25 3 chr2 16354733 16355089 -234332765 + THE1B LTR MaLR 1 364 0 7003 164 16 24 chr2 16355089 16356096 -234331758 - L1PB3 LINE L1 -1442 4712 3750 23 0 0 0 chr2 16356176 16356199 -234331655 + AT_rich Low_complexity Low_complexity 1 23 0 3252 117 10 10 chr2 16356245 16356748 -234331106 + L1PB3 LINE L1 5278 5780 -371 396 0 0 0 chr2 16356748 16356792 -234331062 + (TA)n Simple_repeat Simple_repeat 2 45 0 2435 147 3 13 chr2 16356841 16357216 -234330638 + L1PB3 LINE L1 5782 6152 -2 2220 90 10 7 chr2 16357562 16357861 -234329993 - AluSg SINE Alu -10 300 1 202 351 0 13 chr2 16358271 16358348 -234329506 - L2 LINE L2 -1 3312 3237 185 322 123 72 chr2 16358483 16358620 -234329234 - L2 LINE L2 -443 2871 2742 1371 255 30 14 chr2 16358620 16358988 -234328866 - MLT1A2 LTR MaLR 0 374 1 185 322 123 72 chr2 16358988 16359282 -234328572 - L2 LINE L2 -572 2742 2418 338 279 92 71 chr2 16359359 16359793 -234328061 + L1M4 LINE L1 3044 3486 -2660 1883 278 42 47 chr2 16360744 16361883 -234325971 - L1M4 LINE L1 -1094 5052 3920 290 304 0 0 chr2 16363959 16364038 -234323816 - MIR3 SINE MIR -25 183 105 1340 198 232 11 chr2 16364295 16364644 -234323210 - MSTB LTR MaLR 0 426 1 1957 219 58 30 chr2 16365033 16365553 -234322301 - MER74A LTR ERVL -22 600 2 193 286 65 0 chr2 16366024 16366101 -234321753 + MIR SINE MIR 109 190 -72 2040 151 0 0 chr2 16366839 16367151 -234320703 - AluSx SINE Alu 0 312 1 23 0 0 0 chr2 16367363 16367386 -234320468 + AT_rich Low_complexity Low_complexity 1 23 0 2227 143 13 41 chr2 16367407 16367800 -234320054 - MLT1B LTR MaLR -8 382 1 225 243 68 14 chr2 16367807 16367881 -234319973 - MLT1H LTR MaLR -6 543 466 611 232 80 71 chr2 16367988 16368390 -234319464 + MLT1G1 LTR MaLR 107 528 -2 1302 311 140 27 chr2 16368400 16369351 -234318503 - L2 LINE L2 -287 3026 1974 521 255 122 32 chr2 16369502 16369690 -234318164 + MIR SINE MIR 45 249 -13 814 296 12 28 chr2 16369981 16370234 -234317620 + MIR SINE MIR 14 262 0 335 313 35 21 chr2 16370221 16370365 -234317489 + L3 LINE CR1 1431 1576 -1 * 317 295 45 0 chr2 16370686 16370798 -234317056 + MIR SINE MIR 98 214 -48 653 178 6 64 chr2 16371729 16371886 -234315968 - L1MA7 LINE L1 -23 6268 6121 285 281 11 0 chr2 16372412 16372501 -234315353 + (TG)n Simple_repeat Simple_repeat 1 90 0 1112 212 91 74 chr2 16373848 16374268 -234313586 - LTR16A LTR ERVL -7 443 17 205 195 13 13 chr2 16374462 16374539 -234313315 + (TG)n Simple_repeat Simple_repeat 1 77 0 232 313 0 15 chr2 16375832 16375899 -234311955 - L2 LINE L2 -215 3057 2992 197 231 215 25 chr2 16376373 16376494 -234311360 + MIR3 SINE MIR 60 203 -5 216 0 0 0 chr2 16376502 16376526 -234311328 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr2 16376845 16376868 -234310986 + AT_rich Low_complexity Low_complexity 1 23 0 355 269 58 42 chr2 16377382 16377511 -234310343 + MIR SINE MIR 37 166 -62 5495 143 30 1 chr2 16377760 16378647 -234309207 - L1PA16 LINE L1 0 6166 5254 2087 129 190 11 chr2 16378709 16379072 -234308782 - MSTA LTR MaLR 0 428 1 299 189 306 9 chr2 16379652 16379763 -234308091 - MIR SINE MIR -66 196 53 2370 102 0 0 chr2 16379775 16380080 -234307774 + AluSc SINE Alu 1 305 -4 226 325 25 0 chr2 16380544 16380624 -234307230 + L2 LINE L2 2716 2797 -517 327 386 25 0 chr2 16380698 16380861 -234306993 - LTR16C LTR ERVL -254 237 71 22 35 0 0 chr2 16381720 16381749 -234306105 + AT_rich Low_complexity Low_complexity 1 29 0 252 86 0 0 chr2 16382706 16382741 -234305113 + (TG)n Simple_repeat Simple_repeat 2 36 0 489 321 82 52 chr2 16383466 16383796 -234304058 + L2 LINE L2 2932 3271 -1 288 331 51 22 chr2 16383952 16384095 -234303759 - MIR SINE MIR -63 145 9 258 176 0 0 chr2 16384499 16384550 -234303304 + CT-rich Low_complexity Low_complexity 2 52 0 235 321 25 12 chr2 16384710 16384791 -234303063 + MIR SINE MIR 33 114 -94 283 366 36 0 chr2 16384821 16384933 -234302921 + L2 LINE L2 3121 3236 -36 2089 135 76 22 chr2 16385942 16386298 -234301556 + THE1C LTR MaLR 1 375 0 714 274 70 57 chr2 16388735 16389136 -234298718 - L1ME3 LINE L1 -213 5949 5544 2100 139 0 0 chr2 16389162 16389488 -234298366 - AluSx SINE Alu 0 330 5 363 44 0 0 chr2 16389571 16389616 -234298238 + (CA)n Simple_repeat Simple_repeat 2 46 0 585 266 110 86 chr2 16389931 16390502 -234297352 - L1MEd LINE L1 -4971 1148 564 226 269 106 28 chr2 16390921 16391062 -234296792 - L1MEd LINE L1 -5962 157 6 199 247 273 13 chr2 16391085 16391235 -234296619 + L2 LINE L2 3124 3312 -1 415 241 63 90 chr2 16391993 16392200 -234295654 + MIR3 SINE MIR 2 207 -1 197 258 121 32 chr2 16392771 16392895 -234294959 - L2 LINE L2 0 3313 3179 1030 201 50 65 chr2 16392897 16393176 -234294678 + ORSL DNA AcHobo 1 275 0 192 403 0 22 chr2 16394016 16394155 -234293699 + L2 LINE L2 2896 3031 -241 744 308 49 59 chr2 16395170 16395595 -234292259 - L2 LINE L2 -1 3312 2892 469 328 40 13 chr2 16395593 16395762 -234292092 - MIR SINE MIR -62 146 2 * 2382 200 29 2 chr2 16396846 16397261 -234290593 - MSTB LTR MaLR 0 426 1 877 261 58 0 chr2 16397834 16398060 -234289794 - MIR SINE MIR -8 254 16 405 281 41 8 chr2 16398075 16398196 -234289658 - MIR SINE MIR -59 149 25 598 279 42 6 chr2 16398365 16398530 -234289324 - MER5B DNA MER1_type 0 178 8 1363 176 35 24 chr2 16398810 16399099 -234288755 - MLT1A1 LTR MaLR -15 350 59 282 157 0 0 chr2 16399103 16399154 -234288700 + MLT1A2 LTR MaLR 56 106 -268 1190 210 71 118 chr2 16400957 16401137 -234286717 + MLT1C LTR MaLR 1 188 -279 2090 131 0 19 chr2 16401137 16401451 -234286403 + AluSc SINE Alu 1 308 -1 1190 210 71 118 chr2 16401451 16401760 -234286094 + MLT1C LTR MaLR 188 467 0 278 363 42 32 chr2 16402732 16402922 -234284932 - MIR SINE MIR -11 251 60 182 284 105 42 chr2 16403868 16403963 -234283891 + L2 LINE L2 358 458 -2856 511 254 150 22 chr2 16403970 16404337 -234283517 + LTR16A1 LTR ERVL 1 457 0 389 227 9 0 chr2 16404549 16404659 -234283195 + CT-rich Low_complexity Low_complexity 1 111 0 298 316 156 30 chr2 16404666 16405103 -234282751 + L2 LINE L2 967 1458 -1856 268 22 22 43 chr2 16405152 16405198 -234282656 + (CAAAAA)n Simple_repeat Simple_repeat 1 45 0 193 417 7 0 chr2 16405789 16405928 -234281926 + L2 LINE L2 2271 2410 -904 3387 78 16 0 chr2 16405948 16406383 -234281471 - MLT2A1 LTR ERVL 0 444 3 44245 76 13 1 chr2 16406385 16411970 -234275884 - HERVL-A1 LTR ERVL 0 5654 1 3322 84 9 9 chr2 16411970 16412409 -234275445 - MLT2A1 LTR ERVL 0 444 6 486 215 179 36 chr2 16412414 16412609 -234275245 + MLT1D LTR MaLR 16 238 -267 233 250 65 109 chr2 16413020 16413204 -234274650 - MIR3 SINE MIR 0 208 33 441 328 16 11 chr2 16415561 16415747 -234272107 - MIR3 SINE MIR -14 194 8 25 0 0 0 chr2 16415775 16415800 -234272054 + AT_rich Low_complexity Low_complexity 1 25 0 401 282 99 65 chr2 16416013 16416524 -234271330 - L2 LINE L2 -84 3229 2691 431 298 65 28 chr2 16416761 16416976 -234270878 + MIR SINE MIR 40 262 0 301 274 52 26 chr2 16417894 16418047 -234269807 + MIR SINE MIR 9 165 -97 2166 97 0 0 chr2 16418142 16418465 -234269389 + AluSg SINE Alu 1 323 0 299 257 47 41 chr2 16418761 16418932 -234268922 + L2 LINE L2 2514 2685 -629 895 112 8 8 chr2 16419519 16419653 -234268201 + L1MA4A LINE L1 5656 5789 -514 200 125 50 0 chr2 16419694 16419734 -234268120 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 2824 151 44 4 chr2 16419751 16420248 -234267606 + L1MA4A LINE L1 5783 6299 -4 23 0 0 0 chr2 16420697 16420720 -234267134 + AT_rich Low_complexity Low_complexity 1 23 0 22 94 0 0 chr2 16420876 16420940 -234266914 + AT_rich Low_complexity Low_complexity 1 64 0 2837 146 162 9 chr2 16421733 16422283 -234265571 - MER51A LTR ERV1 0 634 1 213 154 0 0 chr2 16422669 16422708 -234265146 + (TG)n Simple_repeat Simple_repeat 2 40 0 254 282 0 0 chr2 16424405 16424476 -234263378 + L1MC/D LINE L1 5813 5883 -1925 366 328 35 11 chr2 16424594 16424768 -234263086 - L1ME LINE L1 -420 5701 5524 1855 236 65 35 chr2 16424883 16425403 -234262451 + MLT1E LTR MaLR 57 592 -1 321 311 33 38 chr2 16425962 16426145 -234261709 - LTR37B LTR ERV1 -270 198 17 264 243 9 103 chr2 16426998 16427105 -234260749 - MLT1H LTR MaLR 0 549 453 906 186 88 5 chr2 16427263 16427478 -234260376 - MLT1H LTR MaLR -316 233 1 365 275 11 0 chr2 16427526 16427617 -234260237 + MER82 DNA MER2_type 2 93 -560 1828 244 20 24 chr2 16428100 16428555 -234259299 + MER82 DNA MER2_type 201 653 0 277 293 28 0 chr2 16429496 16429602 -234258252 + L2 LINE L2 3153 3261 -11 216 228 0 0 chr2 16429617 16429674 -234258180 + GA-rich Low_complexity Low_complexity 1 57 0 188 178 22 178 chr2 16429817 16429907 -234257947 + MER5A DNA MER1_type 113 188 -1 266 184 40 40 chr2 16430390 16430466 -234257388 + Charlie7 DNA MER1_type 47 122 -2490 914 239 95 35 chr2 16430500 16430960 -234256894 + L2 LINE L2 2573 3061 -252 223 348 67 0 chr2 16431632 16431767 -234256087 - MIR SINE MIR -15 247 104 389 257 20 0 chr2 16432154 16432255 -234255599 - MER5A DNA MER1_type -77 112 10 609 148 95 143 chr2 16432279 16432468 -234255386 + MER58C DNA MER1_type 36 215 0 492 249 22 61 chr2 16433656 16433837 -234254017 - MIR SINE MIR -76 186 13 401 303 48 45 chr2 16434136 16434466 -234253388 + L1ME4a LINE L1 5569 5899 -222 1633 148 61 25 chr2 16434467 16434744 -234253110 + AluJo SINE Alu 1 287 -25 23 54 0 0 chr2 16434946 16434983 -234252871 + AT_rich Low_complexity Low_complexity 1 37 0 453 76 0 0 chr2 16435376 16435442 -234252412 + (TG)n Simple_repeat Simple_repeat 1 66 0 417 323 129 5 chr2 16436078 16436295 -234251559 - MIR SINE MIR -3 259 16 1708 231 17 3 chr2 16437357 16437717 -234250137 + MLT1A1 LTR MaLR 1 365 0 334 243 299 55 chr2 16437893 16438332 -234249522 + MLT1H1 LTR MaLR 1 552 -3 2254 101 59 34 chr2 16438362 16438717 -234249137 + THE1B LTR MaLR 1 364 0 265 258 30 15 chr2 16438804 16438870 -234248984 + MIR SINE MIR 37 103 -159 614 245 77 63 chr2 16439680 16439966 -234247888 + L2 LINE L2 3022 3311 -2 233 271 115 16 chr2 16440003 16440125 -234247729 + L2 LINE L2 3136 3269 -3 254 341 146 8 chr2 16440406 16440529 -234247325 + L2 LINE L2 3133 3272 0 1153 280 79 30 chr2 16440851 16441380 -234246474 + MLT1H1 LTR MaLR 1 555 0 1128 221 119 14 chr2 16442010 16442313 -234245541 + MLT1D LTR MaLR 32 390 -115 2440 143 2 10 chr2 16442315 16442708 -234245146 + MLT1B LTR MaLR 1 390 0 224 280 0 90 chr2 16442816 16442916 -234244938 + MIR SINE MIR 28 118 -144 2075 143 0 3 chr2 16443657 16443964 -234243890 - AluSx SINE Alu -6 306 1 1976 151 0 10 chr2 16443967 16444266 -234243588 - AluSx SINE Alu -16 296 1 370 333 0 25 chr2 16445217 16445379 -234242475 + GA-rich Low_complexity Low_complexity 4 161 0 21 36 0 0 chr2 16445498 16445526 -234242328 + AT_rich Low_complexity Low_complexity 1 28 0 246 267 264 17 chr2 16445736 16446024 -234241830 - L2 LINE L2 -86 3186 2828 224 269 10 67 chr2 16446320 16446424 -234241430 + MIR3 SINE MIR 96 193 -15 889 195 0 13 chr2 16446939 16447098 -234240756 - FRAM SINE Alu -19 157 1 255 252 81 36 chr2 16447360 16447471 -234240383 - MIR SINE MIR -30 232 117 360 159 0 0 chr2 16447945 16448008 -234239846 - MER31B LTR ERV1 0 466 404 2429 143 14 45 chr2 16448023 16448444 -234239410 + MER72 LTR ERV1 311 718 -4 192 375 39 16 chr2 16448535 16448663 -234239191 - MIR3 SINE MIR -64 144 14 1596 179 186 13 chr2 16448703 16448874 -234238980 + MER31B LTR ERV1 1 141 -325 2620 144 28 19 chr2 16448874 16449298 -234238556 - MSTA LTR MaLR 0 428 1 1596 179 186 13 chr2 16449298 16449523 -234238331 + MER31B LTR ERV1 141 466 0 489 188 42 0 chr2 16449545 16449640 -234238214 - MER72 LTR ERV1 -434 288 190 2242 113 3 0 chr2 16449640 16449942 -234237912 - THE1C LTR MaLR 0 375 73 2702 86 60 21 chr2 16449944 16450375 -234237479 - LTR7 LTR ERV1 -2 448 1 2621 94 43 33 chr2 16450375 16450969 -234236885 - HERVH LTR ERV1 0 7713 5600 4316 151 3 1 chr2 16450970 16451631 -234236223 - HERVH LTR ERV1 -2564 5149 4488 3468 104 6 0 chr2 16451633 16452124 -234235730 - HERVH LTR ERV1 -3720 3993 3500 890 149 20 0 chr2 16452123 16452271 -234235583 - HERVH LTR ERV1 -4423 3290 3140 * 20470 92 17 17 chr2 16452265 16455269 -234232585 - HERVH LTR ERV1 -4726 2987 1 2706 90 58 21 chr2 16455271 16455703 -234232151 - LTR7 LTR ERV1 -2 448 1 580 138 0 11 chr2 16455703 16455780 -234232074 - THE1C LTR MaLR -297 78 1 710 190 41 56 chr2 16455780 16455975 -234231879 - MER72 LTR ERV1 -528 194 3 602 252 35 0 chr2 16456031 16456174 -234231680 + MIR SINE MIR 7 154 -108 303 328 40 24 chr2 16456837 16456931 -234230923 + MIR SINE MIR 53 151 -111 1036 249 120 15 chr2 16456931 16457324 -234230530 - MER57B LTR ERV1 0 434 1 303 328 40 24 chr2 16457324 16457354 -234230500 + MIR SINE MIR 151 179 -83 1723 146 42 3 chr2 16457667 16457955 -234229899 - AluSx SINE Alu -11 301 3 276 338 186 8 chr2 16458027 16458290 -234229564 - L3 LINE CR1 -997 580 271 552 226 47 94 chr2 16458871 16459105 -234228749 + MER39 LTR ERV1 271 493 -214 29 28 0 0 chr2 16459697 16459733 -234228121 + AT_rich Low_complexity Low_complexity 1 36 0 955 112 13 0 chr2 16459745 16459897 -234227957 + MER11B LTR ERVK 1060 1213 -23 2397 40 28 31 chr2 16459971 16460296 -234227558 - LTR17 LTR ERV1 -456 324 1 998 47 0 0 chr2 16460296 16460423 -234227431 - HERV17 LTR ERV1 0 8626 8500 1544 159 116 29 chr2 16460569 16460845 -234227009 + AluJb SINE Alu 5 304 -8 2918 229 31 3 chr2 16460900 16461668 -234226186 - L1M3 LINE L1 -1053 5093 4304 680 191 6 67 chr2 16461663 16461784 -234226070 + L1M3 LINE L1 5086 5213 -933 * 2240 120 42 25 chr2 16461784 16462141 -234225713 - THE1B LTR MaLR -1 363 1 11773 93 10 0 chr2 16462141 16463705 -234224149 - THE1B-int LTR MaLR 0 1580 2 1928 135 93 9 chr2 16463706 16464040 -234223814 - THE1B LTR MaLR 0 364 3 680 191 6 67 chr2 16464040 16464093 -234223761 + L1M3 LINE L1 5211 5252 -894 2539 135 21 63 chr2 16464153 16464724 -234223130 + L1M3 LINE L1 5256 5802 -366 1007 319 42 33 chr2 16464752 16465590 -234222264 + L1MEc LINE L1 1266 2110 -4286 1579 311 9 33 chr2 16465592 16466171 -234221683 + L1ME1 LINE L1 35 599 -5797 1224 265 67 0 chr2 16466172 16466666 -234221188 + L1ME1 LINE L1 647 1173 -5223 578 275 0 30 chr2 16466688 16466950 -234220904 + L1ME1 LINE L1 2141 2394 -4002 2660 235 34 16 chr2 16467105 16467851 -234220003 + L1ME1 LINE L1 5472 6230 -5 32 26 0 0 chr2 16468840 16468879 -234218975 + AT_rich Low_complexity Low_complexity 1 39 0 614 245 13 0 chr2 16469189 16469348 -234218506 - L1ME2 LINE L1 -125 6039 5879 223 135 19 19 chr2 16469395 16469447 -234218407 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1519 183 67 0 chr2 16469449 16469717 -234218137 - AluJb SINE Alu -26 286 1 1070 259 135 11 chr2 16469717 16470426 -234217428 - L1ME2 LINE L1 -275 5891 5092 269 237 97 9 chr2 16470491 16470605 -234217249 - L1MA7 LINE L1 -7 6284 6161 325 345 112 4 chr2 16470857 16471089 -234216765 - L1ME LINE L1 -597 5565 5309 1847 184 91 17 chr2 16471236 16471699 -234216155 - MLT1D LTR MaLR -7 498 2 2062 112 75 26 chr2 16472022 16472369 -234215485 - THE1B LTR MaLR 0 364 1 2980 199 28 18 chr2 16472388 16473071 -234214783 - MER54A LTR ERVL -7 894 15 641 387 58 17 chr2 16473483 16473845 -234214009 + L2 LINE L2 161 537 -2777 232 224 0 20 chr2 16473914 16473963 -234213891 + C-rich Low_complexity Low_complexity 1 48 0 1365 315 61 54 chr2 16474007 16475042 -234212812 + L2 LINE L2 2272 3308 -5 321 293 33 50 chr2 16475068 16475249 -234212605 - L1ME LINE L1 -871 5275 5098 423 326 143 9 chr2 16475487 16475717 -234212137 - MIR SINE MIR 0 262 2 264 289 148 44 chr2 16475734 16475869 -234211985 + MIR SINE MIR 52 200 -62 352 326 90 34 chr2 16476355 16476588 -234211266 - L3 LINE CR1 -40 1537 1292 258 203 39 23 chr2 16476588 16476706 -234211148 + (TA)n Simple_repeat Simple_repeat 2 124 -7 207 0 0 0 chr2 16476706 16476729 -234211125 + (CA)n Simple_repeat Simple_repeat 2 24 0 258 203 39 23 chr2 16476729 16476738 -234211116 + (TA)n Simple_repeat Simple_repeat 124 131 0 300 280 247 27 chr2 16476751 16476789 -234211065 - L3 LINE CR1 -291 1286 1258 1232 195 121 76 chr2 16476789 16477276 -234210578 + LTR54 LTR ERV1 1 509 -1 300 280 247 27 chr2 16477276 16477423 -234210431 - L3 LINE CR1 -319 1258 1060 6241 51 4 0 chr2 16477453 16478259 -234209595 - L1PA7 LINE L1 0 6154 5346 475 309 58 16 chr2 16479320 16479511 -234208343 + MIR SINE MIR 4 202 -60 389 304 104 0 chr2 16479550 16479665 -234208189 - MER91B DNA MER1_type -44 146 20 22 0 0 0 chr2 16480066 16480088 -234207766 + AT_rich Low_complexity Low_complexity 1 22 0 719 322 142 34 chr2 16480227 16481089 -234206765 + L2 LINE L2 2377 3313 0 2399 180 9 5 chr2 16481135 16481584 -234206270 - LOR1b LTR ERV1 -10 451 1 28 61 0 0 chr2 16481851 16481900 -234205954 + AT_rich Low_complexity Low_complexity 1 49 0 454 203 17 0 chr2 16482161 16482279 -234205575 + CT-rich Low_complexity Low_complexity 2 121 0 13945 142 22 20 chr2 16482724 16484722 -234203132 - Tigger1 DNA MER2_type 0 2418 410 1277 161 203 0 chr2 16484722 16484988 -234202866 - AluSp SINE Alu 0 314 1 13945 142 22 20 chr2 16484988 16485400 -234202454 - Tigger1 DNA MER2_type -2008 410 1 323 302 9 19 chr2 16486490 16486596 -234201258 + MIR3 SINE MIR 50 154 -54 23 33 0 0 chr2 16487227 16487257 -234200597 + AT_rich Low_complexity Low_complexity 1 30 0 410 231 30 41 chr2 16487275 16487444 -234200410 - L1MC5 LINE L1 -76 7885 7719 234 174 0 0 chr2 16487513 16487559 -234200295 + (TA)n Simple_repeat Simple_repeat 1 46 0 339 235 0 0 chr2 16487631 16487716 -234200138 + MER53 DNA DNA 97 181 -8 1170 213 46 72 chr2 16487746 16488315 -234199539 - L1MC5 LINE L1 -299 7662 7109 29 28 0 0 chr2 16488344 16488380 -234199474 + AT_rich Low_complexity Low_complexity 1 36 0 485 324 163 28 chr2 16488538 16488961 -234198893 - L1MC4a LINE L1 -1633 6175 5696 40 21 0 0 chr2 16489324 16489371 -234198483 + AT_rich Low_complexity Low_complexity 1 47 0 30 0 0 0 chr2 16490239 16490269 -234197585 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr2 16490369 16490389 -234197465 + (T)n Simple_repeat Simple_repeat 1 20 0 1959 104 3 13 chr2 16490589 16490898 -234196956 + MSTA-int LTR MaLR 1275 1580 0 1746 150 200 11 chr2 16490898 16491258 -234196596 + MSTA LTR MaLR 1 428 0 368 327 0 0 chr2 16491264 16491374 -234196480 + MER81 DNA DNA 5 114 0 202 374 42 24 chr2 16492260 16492426 -234195428 + MIR3 SINE MIR 40 208 0 1789 166 28 0 chr2 16492791 16493081 -234194773 - AluJb SINE Alu -14 298 1 265 246 31 0 chr2 16493636 16493701 -234194153 + MSTC LTR MaLR 6 72 -356 715 312 39 13 chr2 16493701 16493932 -234193922 - MIR SINE MIR -23 239 3 249 139 0 0 chr2 16494740 16494783 -234193071 + (TTCCC)n Simple_repeat Simple_repeat 3 45 0 339 338 70 6 chr2 16495343 16495500 -234192354 + L1MEc LINE L1 36 202 -6194 385 251 59 39 chr2 16495528 16495731 -234192123 + L1ME2 LINE L1 5949 6155 -9 1584 169 33 4 chr2 16498088 16498403 -234189451 + AluJb SINE Alu 1 323 0 192 239 0 0 chr2 16498460 16498506 -234189348 + MIR SINE MIR 66 111 -97 402 294 132 35 chr2 16499226 16499515 -234188339 + L2 LINE L2 2083 2399 -915 360 0 0 0 chr2 16500071 16500111 -234187743 + (CA)n Simple_repeat Simple_repeat 1 40 0 210 91 0 0 chr2 16501227 16501260 -234186594 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2312 81 0 0 chr2 16501267 16501574 -234186280 - L1PA8A LINE L1 -18 6113 5807 2223 116 0 3 chr2 16501885 16502216 -234185638 + AluSg SINE Alu 1 330 0 1652 179 47 0 chr2 16502833 16503112 -234184742 + AluJb SINE Alu 13 304 -8 340 315 108 21 chr2 16503304 16503620 -234184234 + L2 LINE L2 1840 2243 -1071 185 372 58 45 chr2 16503685 16503841 -234184013 + L2 LINE L2 2394 2551 -763 223 191 44 44 chr2 16504013 16504081 -234183773 + (TAAAG)n Simple_repeat Simple_repeat 5 72 0 221 317 12 24 chr2 16504520 16504602 -234183252 + L2 LINE L2 3227 3307 -6 348 246 56 56 chr2 16505040 16505182 -234182672 + HERVL40 LTR ERVL 3642 3783 -1747 2095 141 0 3 chr2 16505184 16505496 -234182358 - AluSq SINE Alu 0 313 3 1717 246 28 43 chr2 16505497 16505582 -234182272 + HERVL40 LTR ERVL 3769 3854 -1676 1236 153 161 15 chr2 16505582 16505843 -234182011 - AluJo SINE Alu -3 299 1 1717 246 28 43 chr2 16505843 16506290 -234181564 + HERVL40 LTR ERVL 3854 4293 -1237 705 304 21 12 chr2 16506286 16506529 -234181325 + HERVL40 LTR ERVL 4427 4671 -859 * 1254 59 5 48 chr2 16506930 16507117 -234180737 - L1PA11 LINE L1 -2 6172 5994 963 225 15 59 chr2 16507645 16507976 -234179878 + HERVL40 LTR ERVL 2803 5522 -8 1241 267 65 29 chr2 16507988 16508434 -234179420 + LTR40b LTR ERVL 1 462 0 451 357 30 30 chr2 16508616 16508885 -234178969 - L3 LINE CR1 -242 1335 1067 1108 187 24 125 chr2 16509100 16509469 -234178385 + MLT1C LTR MaLR 59 390 0 1261 188 110 99 chr2 16509475 16509845 -234178009 - MLT1D LTR MaLR 0 505 127 1971 154 7 0 chr2 16509845 16510138 -234177716 - AluSx SINE Alu -17 295 1 1261 188 110 99 chr2 16510138 16510241 -234177613 - MLT1D LTR MaLR -378 127 27 383 122 51 0 chr2 16510250 16510348 -234177506 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 229 294 49 29 chr2 16510774 16510876 -234176978 - L2 LINE L2 -32 3240 3137 329 258 371 0 chr2 16511569 16511728 -234176126 + MIR SINE MIR 4 221 -41 1021 252 35 46 chr2 16512403 16512903 -234174951 + PABL_B LTR ERV1 2 647 -20 304 308 53 81 chr2 16513150 16513397 -234174457 - L1M2a LINE L1 -6585 583 344 318 265 22 38 chr2 16514349 16514534 -234173320 - HAL1b LINE L1 -526 822 641 272 310 94 25 chr2 16514531 16514776 -234173078 - HAL1b LINE L1 -1004 344 83 * 497 249 20 43 chr2 16514937 16515159 -234172695 - L1ME LINE L1 -478 5686 5471 4666 180 29 3 chr2 16515164 16516667 -234171187 - L1PA16 LINE L1 0 6166 4628 2412 135 5 13 chr2 16516728 16517106 -234170748 + THE1C LTR MaLR 1 375 0 6151 61 2 44 chr2 16517203 16518352 -234169502 - L1PA7 LINE L1 -4 6150 4969 192 152 0 0 chr2 16519883 16519916 -234167938 + (CA)n Simple_repeat Simple_repeat 2 34 0 2325 91 3 0 chr2 16520813 16521109 -234166745 - AluSp SINE Alu -16 297 1 187 145 133 72 chr2 16522259 16522342 -234165512 - MIR SINE MIR -30 232 145 840 228 0 12 chr2 16522368 16522535 -234165319 + FRAM SINE Alu 2 166 -10 205 317 195 24 chr2 16522617 16522781 -234165073 + L3 LINE CR1 1375 1566 -11 311 271 42 0 chr2 16523132 16523250 -234164604 - L1ME4a LINE L1 -7 6114 5992 1322 196 99 35 chr2 16523325 16523455 -234164399 - Charlie1 DNA MER1_type -5 2756 2636 2149 59 44 0 chr2 16523455 16523767 -234164087 - AluY SINE Alu 0 324 1 1322 196 99 35 chr2 16523767 16524058 -234163796 - Charlie1 DNA MER1_type -125 2636 2307 707 210 6 54 chr2 16524064 16524110 -234163744 - Charlie1 DNA MER1_type -2602 159 112 2214 128 0 0 chr2 16524110 16524414 -234163440 + AluSg SINE Alu 1 304 -6 707 210 6 54 chr2 16524414 16524534 -234163320 - Charlie1 DNA MER1_type -2649 112 1 503 322 113 27 chr2 16524608 16524981 -234162873 - L1ME4a LINE L1 -339 5782 5378 1771 183 3 0 chr2 16525070 16525355 -234162499 - AluJb SINE Alu -25 287 2 1855 194 30 89 chr2 16525447 16525943 -234161911 - MLT1C LTR MaLR 0 467 1 225 264 107 50 chr2 16526138 16526259 -234161595 - MIR SINE MIR -50 212 85 312 263 117 23 chr2 16527015 16527186 -234160668 + L1ME3A LINE L1 5762 5948 -222 209 221 135 77 chr2 16527527 16527631 -234160223 - L2 LINE L2 -26 3287 3178 186 333 0 0 chr2 16527671 16527719 -234160135 + L2 LINE L2 2589 2636 -678 219 292 42 41 chr2 16527861 16528050 -234159804 + L2 LINE L2 2791 2970 -302 598 226 52 94 chr2 16531159 16531487 -234156367 + LTR37A LTR ERV1 111 424 -2 4525 134 10 34 chr2 16532272 16532733 -234155121 + L1PB4 LINE L1 5346 5780 -376 279 0 0 0 chr2 16532733 16532764 -234155090 + (CA)n Simple_repeat Simple_repeat 2 32 0 4525 134 10 34 chr2 16532764 16533133 -234154721 + L1PB4 LINE L1 5780 6156 0 248 322 56 22 chr2 16533167 16533257 -234154597 - L3 LINE CR1 -206 1371 1279 213 65 0 0 chr2 16533973 16534004 -234153850 + (TTA)n Simple_repeat Simple_repeat 3 33 0 13919 23 2 0 chr2 16534004 16536388 -234151466 - L1PA3 LINE L1 -18 6137 3750 9284 27 0 8 chr2 16536388 16537599 -234150255 + L1PA3 LINE L1 2555 3755 -2391 3422 129 27 15 chr2 16537670 16538191 -234149663 - MER1A DNA MER1_type 0 527 1 410 317 55 18 chr2 16539552 16539716 -234148138 - MIR SINE MIR -72 190 21 229 286 61 0 chr2 16541054 16541152 -234146702 - L1ME4a LINE L1 -26 6095 5992 271 206 130 54 chr2 16541166 16541258 -234146596 - L2 LINE L2 -17 3296 3198 553 259 85 21 chr2 16542288 16542477 -234145377 - MIR SINE MIR -15 247 47 481 211 16 0 chr2 16542686 16542814 -234145040 + CT-rich Low_complexity Low_complexity 3 132 0 537 187 32 8 chr2 16544294 16544417 -234143437 - L1MB7 LINE L1 0 6184 6059 3692 231 51 83 chr2 16544434 16544992 -234142862 - L1M4 LINE L1 -1876 4270 3696 2384 79 0 0 chr2 16544992 16545284 -234142570 + AluSp SINE Alu 1 292 -21 3692 231 51 83 chr2 16545284 16546136 -234141718 - L1M4 LINE L1 -2450 3696 2819 832 81 0 0 chr2 16546136 16546247 -234141607 - AluY SINE Alu -1 310 200 3692 231 51 83 chr2 16546247 16546605 -234141249 - L1M4 LINE L1 -3327 2819 2451 274 339 73 23 chr2 16546724 16546901 -234140953 - MIR SINE MIR -27 235 50 271 331 45 64 chr2 16547200 16547357 -234140497 + MIR SINE MIR 1 154 -108 397 214 151 31 chr2 16547626 16547785 -234140069 - L1M4 LINE L1 -2946 3200 3023 436 88 0 0 chr2 16547790 16547858 -234139996 - L1MA3 LINE L1 0 6305 6238 16267 103 9 15 chr2 16548176 16548905 -234138949 + Charlie3 DNA MER1_type 46 778 -1928 2076 147 13 32 chr2 16548905 16549285 -234138569 + THE1C LTR MaLR 1 373 -2 16267 103 9 15 chr2 16549285 16550991 -234136863 + Charlie3 DNA MER1_type 778 2467 -239 408 65 0 32 chr2 16550989 16551051 -234136803 + Charlie3 DNA MER1_type 2653 2712 0 * 339 354 10 29 chr2 16551445 16551651 -234136203 + L1MEd LINE L1 871 1072 -5047 1820 180 0 3 chr2 16551925 16552236 -234135618 - AluJo SINE Alu -2 310 1 325 256 53 23 chr2 16552375 16552508 -234135346 + HAL1 LINE L1 1500 1636 -871 221 224 15 15 chr2 16552651 16552718 -234135136 + A-rich Low_complexity Low_complexity 3 69 0 25 75 0 0 chr2 16553038 16553091 -234134763 + AT_rich Low_complexity Low_complexity 1 53 0 24 0 0 0 chr2 16553494 16553518 -234134336 + AT_rich Low_complexity Low_complexity 1 24 0 462 309 111 36 chr2 16553597 16553904 -234133950 + L1M4 LINE L1 4034 4363 -1783 309 289 27 52 chr2 16553981 16554215 -234133639 + L1M4 LINE L1 4640 4867 -1279 558 278 69 0 chr2 16554756 16554929 -234132925 + MER45B DNA AcHobo 153 337 -703 2371 175 39 0 chr2 16554931 16555422 -234132432 + MER45B DNA AcHobo 520 1029 -11 2053 146 0 31 chr2 16555776 16556098 -234131756 - AluSx SINE Alu 0 312 1 26 0 0 0 chr2 16556338 16556364 -234131490 + AT_rich Low_complexity Low_complexity 1 26 0 760 95 0 95 chr2 16556365 16556502 -234131352 - FLAM_C SINE Alu 0 143 20 27 0 0 0 chr2 16556531 16556558 -234131296 + AT_rich Low_complexity Low_complexity 1 27 0 737 86 0 243 chr2 16558446 16558668 -234129186 - MLT2A1 LTR ERVL 0 444 277 1057 86 33 0 chr2 16558669 16558820 -234129034 - LTR1 LTR ERV1 -196 589 434 2696 134 25 16 chr2 16558895 16559344 -234128510 + HUERS-P2 LTR ERV1 2631 3083 -5 3776 150 42 70 chr2 16559391 16560199 -234127655 + LTR1 LTR ERV1 1 785 0 1197 99 0 0 chr2 16560201 16560372 -234127482 - HERVL-A1 LTR ERVL -2313 3341 3171 1073 81 7 0 chr2 16560369 16560518 -234127336 + HERVL LTR ERVL 1708 1857 -3797 * 22539 85 12 7 chr2 16560514 16563246 -234124608 - HERVL-A1 LTR ERVL -2486 3168 452 240 35 0 0 chr2 16563246 16563275 -234124579 + (TA)n Simple_repeat Simple_repeat 2 30 0 1543 23 0 0 chr2 16563276 16563452 -234124402 - L1PA5 LINE L1 -11 6143 5968 22539 85 12 7 chr2 16563452 16563868 -234123986 - HERVL-A1 LTR ERVL -5201 453 1 3330 73 35 0 chr2 16563868 16564295 -234123559 - MLT2A1 LTR ERVL 0 444 3 23 33 0 0 chr2 16564450 16564480 -234123374 + AT_rich Low_complexity Low_complexity 1 30 0 2033 112 47 0 chr2 16564825 16565103 -234122751 + AluSx SINE Alu 1 291 -21 319 231 103 0 chr2 16565322 16565400 -234122454 - L2 LINE L2 -36 3277 3192 2095 124 7 0 chr2 16565424 16565734 -234122120 + AluSg SINE Alu 1 312 0 957 233 19 20 chr2 16566155 16566432 -234121422 - MLT2D LTR ERVL -72 342 66 22 35 0 0 chr2 16566501 16566530 -234121324 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 16566592 16566614 -234121240 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr2 16566631 16566670 -234121184 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 16567094 16567115 -234120739 + AT_rich Low_complexity Low_complexity 1 21 0 2118 92 0 14 chr2 16567215 16567497 -234120357 + AluY SINE Alu 1 278 -33 374 315 159 19 chr2 16567586 16567894 -234119960 + L1ME LINE L1 5386 5736 -434 1983 173 12 26 chr2 16567968 16568390 -234119464 - Tigger2a DNA MER2_type -7 427 12 1879 153 45 11 chr2 16568445 16568798 -234119056 - L1PB4 LINE L1 -2 6154 5790 27 0 0 0 chr2 16569109 16569136 -234118718 + AT_rich Low_complexity Low_complexity 1 27 0 2136 137 50 6 chr2 16569742 16570101 -234117753 - THE1C LTR MaLR 0 375 1 279 224 0 13 chr2 16570112 16570188 -234117666 - MLT1J LTR MaLR -10 501 427 27979 73 16 6 chr2 16570215 16574025 -234113829 + HERVL-A2 LTR ERVL 1808 5654 0 739 79 26 0 chr2 16574025 16574139 -234113715 + MLT2A2 LTR ERVL 1 117 -336 916 113 60 0 chr2 16574139 16574290 -234113564 + MLT2A1 LTR ERVL 285 444 0 744 271 5 0 chr2 16574421 16574613 -234113241 - MLT1J LTR MaLR -318 193 1 26 0 0 0 chr2 16575130 16575156 -234112698 + AT_rich Low_complexity Low_complexity 1 26 0 213 39 0 0 chr2 16575183 16575209 -234112645 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 680 178 0 68 chr2 16575209 16575355 -234112499 + MER2 DNA MER2_type 1 136 -209 236 48 0 214 chr2 16575375 16575459 -234112395 - L1MA2 LINE L1 0 6304 6239 486 75 88 0 chr2 16575459 16575539 -234112315 + L1MA1 LINE L1 6081 6167 -135 950 123 18 24 chr2 16575539 16575709 -234112145 + MER2 DNA MER2_type 122 290 -55 21 0 0 0 chr2 16575891 16575912 -234111942 + AT_rich Low_complexity Low_complexity 1 21 0 2501 50 3 3 chr2 16576687 16576987 -234110867 + AluY SINE Alu 1 300 -11 21 36 0 0 chr2 16577479 16577507 -234110347 + AT_rich Low_complexity Low_complexity 1 28 0 251 193 35 0 chr2 16578128 16578185 -234109669 + GA-rich Low_complexity Low_complexity 3 61 0 257 408 8 8 chr2 16579159 16579279 -234108575 - MIR SINE MIR -66 142 23 258 275 208 20 chr2 16579877 16580026 -234107828 + L2 LINE L2 3112 3288 -25 230 228 41 76 chr2 16580428 16580494 -234107360 + MER65B LTR ERV1 2 69 -462 1975 124 112 6 chr2 16580494 16580833 -234107021 + THE1C LTR MaLR 1 375 0 230 228 41 76 chr2 16580833 16580911 -234106943 + MER65B LTR ERV1 69 141 -390 21 0 0 0 chr2 16581271 16581292 -234106562 + AT_rich Low_complexity Low_complexity 1 21 0 277 322 31 46 chr2 16581725 16581986 -234105868 + MER65A LTR ERV1 187 443 -2 226 150 0 0 chr2 16581994 16582034 -234105820 + LTR67 LTR ERVL 497 536 -21 27 29 0 0 chr2 16582499 16582533 -234105321 + AT_rich Low_complexity Low_complexity 1 34 0 311 288 12 0 chr2 16583111 16583191 -234104663 + MIR3 SINE MIR 112 192 -16 250 368 128 32 chr2 16583383 16583914 -234103940 - L2 LINE L2 -154 3118 2535 3073 137 16 11 chr2 16584096 16584660 -234103194 - L1PBa LINE L1 -4829 2034 1468 257 372 37 34 chr2 16585215 16585511 -234102343 + L1MEc LINE L1 137 433 -5963 629 258 40 33 chr2 16585774 16586224 -234101630 + L1MEc LINE L1 670 4266 -1949 884 191 21 2 chr2 16586438 16586653 -234101201 - L1MA8 LINE L1 -361 5939 5724 1605 161 62 4 chr2 16587002 16587276 -234100578 + AluJo SINE Alu 1 290 -22 264 57 0 0 chr2 16588276 16588311 -234099543 + MADE1 DNA Mariner 46 80 0 552 284 110 21 chr2 16588735 16588971 -234098883 - MIR SINE MIR -3 259 3 3891 138 30 28 chr2 16589015 16589725 -234098129 - MER50 LTR ERV1 -23 711 1 189 289 0 0 chr2 16590302 16590347 -234097507 - L3 LINE CR1 -9 1568 1524 379 368 42 10 chr2 16591061 16591254 -234096600 + MIR SINE MIR 1 199 -63 571 135 129 31 chr2 16592830 16592993 -234094861 - MER53 DNA DNA -1 188 10 930 223 45 18 chr2 16593103 16593323 -234094531 + MIR SINE MIR 31 256 -6 327 301 34 91 chr2 16594051 16594260 -234093594 + MIR SINE MIR 10 206 -56 478 150 24 24 chr2 16595157 16595284 -234092570 + GA-rich Low_complexity Low_complexity 4 130 0 22 35 0 0 chr2 16597838 16597867 -234089987 + AT_rich Low_complexity Low_complexity 1 29 0 595 197 98 0 chr2 16597916 16598038 -234089816 + AluJo SINE Alu 1 134 -178 26 30 0 0 chr2 16598039 16598072 -234089782 + AT_rich Low_complexity Low_complexity 1 33 0 284 193 0 35 chr2 16598593 16598650 -234089204 + MIR3 SINE MIR 127 181 -27 240 167 0 0 chr2 16598765 16598813 -234089041 + (TGGA)n Simple_repeat Simple_repeat 4 51 0 1564 198 46 48 chr2 16598961 16599128 -234088726 + MLT2D LTR ERVL 1 167 -247 1902 169 36 3 chr2 16599128 16599460 -234088394 + MER61A LTR ERV1 1 343 0 1564 198 46 48 chr2 16599460 16599707 -234088147 + MLT2D LTR ERVL 167 414 0 203 333 26 0 chr2 16600228 16600306 -234087548 + L2 LINE L2 3234 3313 0 209 325 162 0 chr2 16601154 16601271 -234086583 - MIR SINE MIR -65 197 62 228 398 26 18 chr2 16601355 16601468 -234086386 + L2 LINE L2 3138 3251 -21 874 300 108 27 chr2 16601880 16602115 -234085739 + L2 LINE L2 2905 3182 -131 210 71 0 0 chr2 16602115 16602143 -234085711 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 874 300 108 27 chr2 16602143 16602277 -234085577 + L2 LINE L2 3182 3304 -9 260 236 0 14 chr2 16602370 16602442 -234085412 + LTR66 LTR ERVL 368 438 -172 221 350 0 48 chr2 16652948 16653051 -234034803 + MIR SINE MIR 33 130 -78 354 156 0 0 chr2 16654116 16654180 -234033674 + (CA)n Simple_repeat Simple_repeat 2 65 0 316 250 0 0 chr2 16654211 16654283 -234033571 - MIR SINE MIR -106 156 85 704 234 40 54 chr2 16654679 16654901 -234032953 - MER20 DNA MER1_type 0 219 1 1489 158 23 4 chr2 16655246 16655512 -234032342 + MSTA LTR MaLR 1 271 -157 199 238 12 24 chr2 16655636 16655720 -234032134 + G-rich Low_complexity Low_complexity 6 88 0 201 349 0 12 chr2 16655721 16655807 -234032047 + GA-rich Low_complexity Low_complexity 2 86 0 453 181 75 30 chr2 16655916 16656049 -234031805 + MSTA LTR MaLR 290 428 0 442 311 221 23 chr2 16656473 16656570 -234031284 - L2 LINE L2 -135 3178 3102 1002 79 0 7 chr2 16656570 16656710 -234031144 - MER85 DNA T2_type 0 139 1 442 311 221 23 chr2 16656710 16657141 -234030713 - L2 LINE L2 -211 3102 2543 353 353 86 11 chr2 16657890 16658077 -234029777 - L1ME3A LINE L1 -8 6162 5962 1017 249 24 90 chr2 16658176 16658685 -234029169 - L1MC5 LINE L1 -452 7509 7035 929 213 206 22 chr2 16660079 16660351 -234027503 + MSTD LTR MaLR 1 322 -74 1245 159 171 27 chr2 16660365 16660619 -234027235 + MSTA LTR MaLR 1 306 -69 2410 118 21 16 chr2 16660619 16660992 -234026862 + THE1C LTR MaLR 1 375 0 1245 159 171 27 chr2 16660992 16661074 -234026780 + MSTA LTR MaLR 306 375 0 1272 301 91 60 chr2 16661074 16662486 -234025368 - L2 LINE L2 -32 3281 1820 510 165 173 45 chr2 16662833 16662966 -234024888 + MER3 DNA MER1_type 60 209 0 413 226 60 0 chr2 16662966 16663007 -234024847 - MER3 DNA MER1_type -162 47 2 188 257 95 68 chr2 16663850 16663924 -234023930 - MIR3 SINE MIR -50 158 83 276 331 53 38 chr2 16664390 16664523 -234023331 - L2 LINE L2 -4 3268 3134 294 240 140 10 chr2 16664662 16664762 -234023092 + LTR50 LTR ERVL 104 216 -579 267 185 56 0 chr2 16664788 16664842 -234023012 + LTR50 LTR ERVL 328 384 -411 25 31 0 0 chr2 16664981 16665013 -234022841 + AT_rich Low_complexity Low_complexity 1 32 0 279 304 13 0 chr2 16665097 16665176 -234022678 + ERVL LTR ERVL 580 659 -5105 2182 98 0 44 chr2 16665177 16665493 -234022361 - AluSg SINE Alu -8 302 1 406 325 79 25 chr2 16665620 16665900 -234021954 + ERVL LTR ERVL 856 1150 -4614 858 188 24 6 chr2 16665921 16666086 -234021768 + MLT1D LTR MaLR 338 505 0 242 252 96 35 chr2 16666499 16666614 -234021240 - L2 LINE L2 -227 3086 2965 1949 158 3 0 chr2 16667170 16667480 -234020374 + AluSq SINE Alu 3 313 0 1760 192 0 19 chr2 16668294 16668601 -234019253 + AluJb SINE Alu 1 301 -11 1705 164 4 0 chr2 16668699 16668968 -234018886 + AluSq SINE Alu 1 270 -43 392 196 17 73 chr2 16668975 16669154 -234018700 + (CACCC)n Simple_repeat Simple_repeat 3 171 0 293 306 115 32 chr2 16669877 16670034 -234017820 + MIR SINE MIR 93 262 0 1872 188 35 35 chr2 16670898 16671446 -234016408 + MLT2A2 LTR ERVL 3 554 0 21 0 0 0 chr2 16671465 16671486 -234016368 + AT_rich Low_complexity Low_complexity 1 21 0 2129 197 38 20 chr2 16671533 16672040 -234015814 - L1MB7 LINE L1 -7 6177 5662 775 243 19 34 chr2 16672036 16672304 -234015550 - L1MB7 LINE L1 -1612 4534 4271 * 443 270 9 0 chr2 16672308 16672423 -234015431 - L1MB7 LINE L1 -2234 3912 3797 208 278 10 0 chr2 16672522 16672619 -234015235 + (TA)n Simple_repeat Simple_repeat 2 99 0 2370 279 105 23 chr2 16672688 16673240 -234014614 - L1MB7 LINE L1 -2416 3730 3225 2376 87 0 7 chr2 16673240 16673550 -234014304 - AluSx SINE Alu -4 308 1 2370 279 105 23 chr2 16673550 16674168 -234013686 - L1MB7 LINE L1 -2921 3225 2442 258 81 0 0 chr2 16674168 16674205 -234013649 + (TG)n Simple_repeat Simple_repeat 2 38 0 2370 279 105 23 chr2 16674205 16674318 -234013536 - L1MB7 LINE L1 -3704 2442 2340 * 4164 234 72 77 chr2 16674317 16675763 -234012091 - L1M4c LINE L1 -4146 2679 1228 2154 106 0 3 chr2 16675763 16676082 -234011772 - AluSx SINE Alu 0 318 1 4164 234 72 77 chr2 16676082 16676208 -234011646 - L1M4c LINE L1 -5597 1228 1103 231 88 0 0 chr2 16676208 16676242 -234011612 + (TTG)n Simple_repeat Simple_repeat 3 36 0 4164 234 72 77 chr2 16676242 16677173 -234010681 - L1M4c LINE L1 -5722 1103 17 21 36 0 0 chr2 16677187 16677215 -234010639 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 16679376 16679397 -234008457 + AT_rich Low_complexity Low_complexity 1 21 0 12851 176 36 15 chr2 16679756 16679922 -234007932 - L1MA3 LINE L1 -11 7713 7552 2128 123 0 0 chr2 16679922 16680214 -234007640 + AluSg SINE Alu 3 294 -16 12851 176 36 15 chr2 16680214 16683812 -234004042 - L1MA3 LINE L1 -172 7552 3866 451 87 43 0 chr2 16683795 16683864 -234003990 - L1MA3 LINE L1 -3927 3638 3567 * 10792 186 78 31 chr2 16683866 16685498 -234002356 - L1MA3 LINE L1 -4099 3466 2012 7904 97 11 17 chr2 16685498 16687478 -234000376 - L1PA8 LINE L1 0 6172 4198 10792 186 78 31 chr2 16687478 16688956 -233998898 - L1MA3 LINE L1 -5553 2012 605 260 273 67 79 chr2 16689074 16689239 -233998615 + MER103 DNA DNA 3 165 -1 385 336 24 8 chr2 16689725 16689850 -233998004 + MIR SINE MIR 34 160 -102 1554 178 14 14 chr2 16690490 16690777 -233997077 + AluJo SINE Alu 1 287 -25 253 262 85 61 chr2 16691973 16692137 -233995717 - L2 LINE L2 -37 3276 3109 262 338 83 7 chr2 16692446 16692591 -233995263 - MLT1L LTR MaLR -392 223 68 218 306 106 12 chr2 16692599 16692684 -233995170 - L2 LINE L2 -266 3047 2955 306 271 35 0 chr2 16692695 16692780 -233995074 - MIR SINE MIR -8 254 167 1000 139 6 0 chr2 16692782 16692940 -233994914 - MLT2D LTR ERVL -246 168 10 1288 315 192 28 chr2 16693040 16694293 -233993561 + L2 LINE L2 931 2389 -925 271 287 13 70 chr2 16694428 16694585 -233993269 - Charlie8 DNA MER1_type -2182 235 88 1668 197 14 40 chr2 16694808 16695178 -233992676 - MLT1A1 LTR MaLR 0 365 6 12648 149 29 33 chr2 16695549 16697594 -233990260 + Tigger1 DNA MER2_type 1 2051 -367 1483 195 44 0 chr2 16697594 16697891 -233989963 + AluJb SINE Alu 3 312 0 12648 149 29 33 chr2 16697891 16698100 -233989754 + Tigger1 DNA MER2_type 2051 2249 -169 2142 116 7 0 chr2 16698100 16698392 -233989462 + AluSx SINE Alu 1 294 -18 12648 149 29 33 chr2 16698392 16698562 -233989292 + Tigger1 DNA MER2_type 2249 2418 0 1625 205 22 11 chr2 16698708 16699074 -233988780 - L1MB1 LINE L1 -349 5819 5450 1301 173 88 10 chr2 16699071 16699378 -233988476 + L1MB1 LINE L1 5852 6139 -50 * 1175 158 37 20 chr2 16699778 16700024 -233987830 + L1MA10 LINE L1 6082 6331 -3 302 262 161 36 chr2 16701343 16701511 -233986343 - MIR SINE MIR -54 208 20 239 259 222 19 chr2 16701545 16701653 -233986201 + MIR3 SINE MIR 73 202 -6 1630 213 124 7 chr2 16701695 16702098 -233985756 - LTR40a LTR ERVL 0 519 70 225 334 158 42 chr2 16702236 16702834 -233985020 - L2 LINE L2 -23 3249 2581 26 0 0 0 chr2 16702834 16702860 -233984994 + AT_rich Low_complexity Low_complexity 1 26 0 652 264 50 88 chr2 16703002 16703263 -233984591 + MIR SINE MIR 12 262 0 26 0 0 0 chr2 16703403 16703429 -233984425 + AT_rich Low_complexity Low_complexity 1 26 0 5067 134 10 11 chr2 16703429 16704232 -233983622 - L1PA15 LINE L1 -3 6162 5361 182 268 54 0 chr2 16704620 16704676 -233983178 + MIR SINE MIR 74 132 -130 278 177 42 42 chr2 16705850 16705946 -233981908 - L1M4 LINE L1 -410 5774 5679 3355 221 32 28 chr2 16706172 16707057 -233980797 - L1M3 LINE L1 -705 5473 4577 1876 141 40 45 chr2 16707057 16707434 -233980420 - THE1C LTR MaLR 0 375 1 3355 221 32 28 chr2 16707434 16707655 -233980199 - L1M3 LINE L1 -1601 4577 4358 * 6689 204 17 22 chr2 16707653 16707705 -233980149 - L1MC1 LINE L1 -1 6332 6281 2376 21 11 4 chr2 16707705 16707985 -233979869 + AluY SINE Alu 17 298 -13 6689 204 17 22 chr2 16707985 16708941 -233978913 - L1MC1 LINE L1 -52 6281 5321 486 160 59 0 chr2 16708941 16709060 -233978794 - L1MA5 LINE L1 -4 6296 6171 6689 204 17 22 chr2 16709060 16710952 -233976902 - L1MC1 LINE L1 -1012 5321 3443 4126 206 28 10 chr2 16710955 16711277 -233976577 - L1M4 LINE L1 -377 6299 5984 4037 142 14 1 chr2 16711277 16711945 -233975909 - L1PA15 LINE L1 -6 6159 5484 1569 36 20 0 chr2 16711951 16712147 -233975707 - L1PA4 LINE L1 0 6155 5956 4126 206 28 10 chr2 16712147 16713119 -233974735 - L1M4 LINE L1 -696 5980 4974 966 227 4 19 chr2 16713123 16713379 -233974475 + L1P LINE L1 4202 4453 -1693 10400 164 22 9 chr2 16713392 16715225 -233972629 - Tigger1 DNA MER2_type -562 1856 1 4951 258 78 52 chr2 16715230 16718387 -233969467 - L1M4c LINE L1 -3291 3353 1 21 0 0 0 chr2 16719063 16719084 -233968770 + AT_rich Low_complexity Low_complexity 1 21 0 197 216 0 0 chr2 16719663 16719700 -233968154 + L3 LINE CR1 1535 1571 -6 2169 128 7 0 chr2 16719816 16720113 -233967741 - AluSx SINE Alu -11 301 3 9204 134 33 14 chr2 16720113 16721598 -233966256 - THE1C-int LTR MaLR -67 1513 1 1108 122 70 52 chr2 16721604 16721833 -233966021 - THE1C LTR MaLR -5 370 138 313 219 0 0 chr2 16721834 16721898 -233965956 - L1PB4 LINE L1 -55 6101 6038 238 359 132 0 chr2 16721900 16722067 -233965787 + L2 LINE L2 2860 3048 -265 1123 312 147 35 chr2 16722386 16722869 -233964985 + L2 LINE L2 1797 2225 -1088 2132 145 3 0 chr2 16722869 16723173 -233964681 - AluSx SINE Alu -7 305 1 1123 312 147 35 chr2 16723173 16724041 -233963813 + L2 LINE L2 2225 3313 0 359 282 145 0 chr2 16724501 16724618 -233963236 - L2 LINE L2 0 3313 3180 1097 306 63 27 chr2 16724657 16725102 -233962752 - L2 LINE L2 0 3313 2853 408 326 94 56 chr2 16725118 16725458 -233962396 + L2 LINE L2 2820 3172 -100 180 183 14 28 chr2 16725492 16725563 -233962291 + GA-rich Low_complexity Low_complexity 2 71 0 358 153 0 47 chr2 16726099 16726184 -233961670 - L1PA11 LINE L1 0 6174 6094 2201 95 3 0 chr2 16727361 16727657 -233960197 - AluY SINE Alu -14 297 1 564 304 91 42 chr2 16728355 16729223 -233958631 + L1MC4a LINE L1 4109 5019 -1127 2071 251 118 42 chr2 16729429 16729813 -233958041 + L1MC4a LINE L1 5254 5608 -2200 2283 109 0 0 chr2 16729813 16730124 -233957730 + AluSq SINE Alu 1 311 -2 2071 251 118 42 chr2 16730124 16730680 -233957174 + L1MC4a LINE L1 5608 6265 -1543 415 335 28 6 chr2 16731038 16731214 -233956640 + MIR SINE MIR 14 193 -69 241 348 26 0 chr2 16731268 16731383 -233956471 + L2 LINE L2 3196 3313 0 271 454 27 6 chr2 16732527 16732710 -233955144 + MIR3 SINE MIR 5 191 -17 439 234 28 48 chr2 16732753 16732898 -233954956 - MIR3 SINE MIR -48 160 19 22 70 0 0 chr2 16733033 16733076 -233954778 + AT_rich Low_complexity Low_complexity 1 43 0 347 274 34 26 chr2 16733182 16733299 -233954555 + MIR SINE MIR 109 226 -36 196 211 0 19 chr2 16733314 16733366 -233954488 - MIR SINE MIR -107 155 105 379 364 29 12 chr2 16733448 16733621 -233954233 + MIR SINE MIR 13 188 -74 2151 133 96 20 chr2 16734281 16734679 -233953175 - MSTA LTR MaLR 0 428 1 291 332 216 29 chr2 16735073 16735383 -233952471 + L3 LINE CR1 438 805 -772 658 256 6 0 chr2 16735583 16735755 -233952099 + MER119 DNA MER1_type 106 278 -305 239 323 0 0 chr2 16736139 16736201 -233951653 + L2 LINE L2 2914 2975 -339 2546 172 32 8 chr2 16736241 16736335 -233951519 - L1MC2 LINE L1 -296 6037 5947 1808 161 39 0 chr2 16736335 16736665 -233951189 - L1MC2 LINE L1 -5 6339 5997 2546 172 32 8 chr2 16736665 16737129 -233950725 - L1MC2 LINE L1 -386 5947 5464 199 205 0 0 chr2 16738165 16738204 -233949650 + MIR SINE MIR 66 104 -104 260 353 23 23 chr2 16739307 16739440 -233948414 - MIR3 SINE MIR -11 197 65 222 37 0 0 chr2 16739685 16739712 -233948142 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 296 350 29 21 chr2 16740586 16740726 -233947128 - MIR SINE MIR -108 154 14 1476 196 16 57 chr2 16741276 16741664 -233946190 + MLT1A2 LTR MaLR 1 372 -2 1637 180 9 25 chr2 16742521 16742838 -233945016 - AluJo SINE Alu 0 312 1 637 225 107 24 chr2 16743943 16744232 -233943622 + HsTC2 DNA Tc2 1584 1896 -2 346 333 96 10 chr2 16744367 16744658 -233943196 + L1 LINE L1 3623 3938 -2208 377 315 150 31 chr2 16745017 16745277 -233942577 - L2 LINE L2 0 3313 3023 235 273 65 42 chr2 16745321 16745537 -233942317 + L1 LINE L1 4342 4562 -1584 1833 174 14 20 chr2 16745554 16745898 -233941956 + MER61A LTR ERV1 2 343 0 266 343 27 20 chr2 16745981 16746127 -233941727 - L2 LINE L2 -924 2390 2244 323 182 13 0 chr2 16748137 16748214 -233939640 + GA-rich Low_complexity Low_complexity 3 80 0 192 400 0 0 chr2 16748703 16748768 -233939086 - MIR SINE MIR -106 102 38 32 0 0 0 chr2 16748941 16748973 -233938881 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr2 16749227 16749253 -233938601 + AT_rich Low_complexity Low_complexity 1 26 0 1140 276 19 91 chr2 16749774 16750235 -233937619 + L1ME LINE L1 132 559 -5837 391 280 86 33 chr2 16750403 16750832 -233937022 + L1ME LINE L1 3597 4048 -2167 1137 176 30 29 chr2 16750855 16751267 -233936587 - MLT1D LTR MaLR 0 505 6 216 0 0 0 chr2 16751303 16751327 -233936527 + (TC)n Simple_repeat Simple_repeat 2 25 0 218 103 0 26 chr2 16751327 16751366 -233936488 + (TA)n Simple_repeat Simple_repeat 2 39 0 439 309 101 42 chr2 16751414 16751889 -233935965 + L1ME LINE L1 4168 4670 -1545 1922 152 3 0 chr2 16752177 16752473 -233935381 + AluSx SINE Alu 1 297 -15 27 0 0 0 chr2 16752734 16752761 -233935093 + AT_rich Low_complexity Low_complexity 1 27 0 315 257 30 10 chr2 16752921 16753022 -233934832 + L1MC5 LINE L1 7808 7910 -51 2356 90 3 0 chr2 16753680 16753980 -233933874 - AluSc SINE Alu -8 301 1 329 252 40 80 chr2 16754245 16754337 -233933517 + L1ME LINE L1 5333 5418 -2459 7493 31 2 0 chr2 16754337 16755425 -233932429 + L1PA3 LINE L1 5066 6155 0 329 252 40 80 chr2 16755425 16755483 -233932371 + L1ME LINE L1 5418 5477 -2400 265 269 23 8 chr2 16755702 16755832 -233932022 + L1ME LINE L1 5763 5894 -296 344 240 210 0 chr2 16756208 16756308 -233931546 - L2 LINE L2 -8 3305 3185 21 36 0 0 chr2 16756810 16756838 -233931016 + AT_rich Low_complexity Low_complexity 1 28 0 530 282 84 15 chr2 16757816 16758089 -233929765 - L1ME3A LINE L1 -104 6066 5775 1722 189 93 31 chr2 16758089 16758617 -233929237 - MLT2A2 LTR ERVL 0 554 1 9164 124 42 47 chr2 16758618 16760207 -233927647 + THE1B-int LTR MaLR 1 1580 0 2582 102 14 11 chr2 16760207 16760570 -233927284 + THE1B LTR MaLR 1 364 0 845 262 58 9 chr2 16760570 16761031 -233926823 - L1ME3A LINE L1 -391 5779 5266 1704 221 20 6 chr2 16761163 16761520 -233926334 + MLT1A2 LTR MaLR 2 363 -11 2421 225 19 21 chr2 16761531 16762157 -233925697 + MLT1A2-int LTR MaLR 1 625 -1110 1881 226 11 20 chr2 16762583 16763021 -233924833 + MLT1A2-int LTR MaLR 1302 1735 0 1321 191 55 76 chr2 16763021 16763403 -233924451 + MLT1A2 LTR MaLR 1 374 0 287 238 228 0 chr2 16763524 16763625 -233924229 - MER5C DNA MER1_type -200 124 1 1029 184 35 4 chr2 16763679 16763935 -233923919 - Charlie5 DNA MER1_type -87 2525 2262 280 158 26 66 chr2 16763943 16764019 -233923835 - Charlie5 DNA MER1_type -2513 99 27 719 138 0 21 chr2 16764020 16764165 -233923689 + L1P LINE L1 4600 4741 -1405 222 345 34 14 chr2 16764665 16764813 -233923041 + MIR SINE MIR 99 249 -13 2082 146 3 0 chr2 16766041 16766350 -233921504 - AluSg SINE Alu 0 310 1 2570 119 3 11 chr2 16766672 16767049 -233920805 + THE1C LTR MaLR 2 375 0 9454 136 24 31 chr2 16767049 16768641 -233919213 + THE1C-int LTR MaLR 1 1580 0 2156 93 10 13 chr2 16768641 16768952 -233918902 + THE1C LTR MaLR 1 310 -65 1158 171 4 80 chr2 16768945 16769220 -233918634 - MER7A DNA MER2_type -94 252 1 * 236 294 28 28 chr2 16769220 16769329 -233918525 - MIR SINE MIR -2 260 152 348 301 187 0 chr2 16769337 16769460 -233918394 - MER5A DNA MER1_type -8 181 36 430 317 0 28 chr2 16769477 16769619 -233918235 - MIR SINE MIR -90 172 35 511 343 42 13 chr2 16770273 16770512 -233917342 - MIR SINE MIR -5 257 12 2249 100 10 3 chr2 16771354 16771654 -233916200 - AluSq SINE Alu -11 302 1 21 0 0 0 chr2 16771946 16771967 -233915887 + AT_rich Low_complexity Low_complexity 1 21 0 234 378 36 69 chr2 16772924 16773493 -233914361 + L2 LINE L2 2660 3271 -1 215 186 23 0 chr2 16774578 16774621 -233913233 + A-rich Low_complexity Low_complexity 3 46 0 24 67 0 0 chr2 16774741 16774786 -233913068 + AT_rich Low_complexity Low_complexity 1 45 0 1915 149 48 107 chr2 16774957 16775453 -233912401 + MLT1C LTR MaLR 1 467 0 5682 149 21 12 chr2 16775453 16776480 -233911374 - Tigger1 DNA MER2_type -2 2416 1380 1084 128 55 66 chr2 16776470 16776512 -233911342 - Tigger1 DNA MER2_type -2164 254 213 * 1567 189 50 4 chr2 16776512 16776816 -233911038 + AluJb SINE Alu 1 317 0 1084 128 55 66 chr2 16776816 16777028 -233910826 - Tigger1 DNA MER2_type -2205 213 1 641 239 19 19 chr2 16777439 16777502 -233910352 - MER20 DNA MER1_type 0 219 157 549 0 0 0 chr2 16777502 16777563 -233910291 + (CA)n Simple_repeat Simple_repeat 1 61 0 641 239 19 19 chr2 16777563 16777658 -233910196 - MER20 DNA MER1_type -61 158 61 1438 184 125 33 chr2 16777947 16778468 -233909386 - MLT2A2 LTR ERVL 0 554 1 346 272 144 17 chr2 16780243 16780416 -233907438 - MIR SINE MIR -60 202 8 202 351 11 21 chr2 16780564 16780658 -233907196 - MIR SINE MIR -156 106 14 1374 179 120 99 chr2 16780722 16781117 -233906737 + MLT2B1 LTR ERVL 1 409 -111 2264 100 7 0 chr2 16781117 16781408 -233906446 + AluSp SINE Alu 1 293 -20 1374 179 120 99 chr2 16781408 16781487 -233906367 + MLT2B1 LTR ERVL 409 485 -35 2519 137 11 48 chr2 16781597 16782036 -233905818 + MSTB LTR MaLR 4 426 0 288 0 0 0 chr2 16782057 16782089 -233905765 + (CA)n Simple_repeat Simple_repeat 1 32 0 3471 248 58 72 chr2 16782736 16785213 -233902641 - L1ME1 LINE L1 -3 6163 3730 1449 59 5 0 chr2 16785213 16785400 -233902454 - L1PA5 LINE L1 0 6154 5967 3471 248 58 72 chr2 16785400 16785916 -233901938 - L1ME1 LINE L1 -2436 3730 3208 1563 127 17 4 chr2 16785932 16786168 -233901686 - AluSx SINE Alu -12 300 62 300 213 43 0 chr2 16786168 16786252 -233901602 - L1M4 LINE L1 -1416 4730 4640 533 114 0 0 chr2 16786255 16786334 -233901520 - AluSx SINE Alu -233 79 1 728 319 16 40 chr2 16786524 16786775 -233901079 + MIR SINE MIR 16 260 -2 213 94 0 0 chr2 16786986 16787018 -233900836 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1973 129 7 0 chr2 16787022 16787301 -233900553 - AluSx SINE Alu -31 281 1 2370 268 107 24 chr2 16789089 16789409 -233898445 - L2 LINE L2 -26 3287 2995 1675 184 33 6 chr2 16789409 16789746 -233898108 + L1PA16 LINE L1 5821 6166 0 2370 268 107 24 chr2 16789746 16790486 -233897368 - L2 LINE L2 -318 2995 2151 421 181 101 14 chr2 16790548 16790686 -233897168 - MER5C DNA MER1_type -48 276 127 1195 106 35 26 chr2 16791218 16791445 -233896409 - L1MA9 LINE L1 0 6312 6084 479 227 8 34 chr2 16791681 16791800 -233896054 - MER5C DNA MER1_type -196 128 13 452 270 203 22 chr2 16791899 16792121 -233895733 - L2 LINE L2 -1162 2152 1891 195 42 0 0 chr2 16792574 16792598 -233895256 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2277 115 0 3 chr2 16792605 16792961 -233894893 - AluSx SINE Alu 0 355 1 209 319 125 0 chr2 16795055 16795127 -233892727 - L2 LINE L2 -5 3267 3187 544 309 126 50 chr2 16795885 16796490 -233891364 - L2 LINE L2 -440 2874 2224 25 0 0 0 chr2 16797650 16797675 -233890179 + AT_rich Low_complexity Low_complexity 1 25 0 787 135 11 34 chr2 16798282 16798460 -233889394 - L1MA8 LINE L1 0 6291 6118 1737 223 6 11 chr2 16799438 16799801 -233888053 - MLT1A1 LTR MaLR -2 363 3 362 296 72 0 chr2 16800128 16800253 -233887601 + L2 LINE L2 3180 3313 0 633 324 28 47 chr2 16800773 16801026 -233886828 - MIR SINE MIR 0 262 15 380 254 192 6 chr2 16801945 16802122 -233885732 - L1MC5 LINE L1 -728 7233 7024 279 265 60 0 chr2 16802932 16803015 -233884839 + MIR SINE MIR 123 210 -52 298 175 32 0 chr2 16803736 16803799 -233884055 - MER94 DNA DNA -45 89 25 396 167 0 0 chr2 16804443 16804515 -233883339 + (CA)n Simple_repeat Simple_repeat 1 72 0 613 295 5 36 chr2 16804800 16804993 -233882861 + MER20 DNA MER1_type 28 214 -5 333 329 68 81 chr2 16805398 16805967 -233881887 + L1MC4a LINE L1 6119 6680 -1128 353 286 48 5 chr2 16806199 16806388 -233881466 + L1M4 LINE L1 2320 2516 -3630 1889 253 52 11 chr2 16806538 16807254 -233880600 - L1M4 LINE L1 -1857 4289 3545 319 274 0 0 chr2 16807292 16807387 -233880467 - L1M4 LINE L1 -2740 3406 3312 207 0 0 0 chr2 16807731 16807754 -233880100 + (TAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 16808390 16808411 -233879443 + AT_rich Low_complexity Low_complexity 1 21 0 245 220 34 0 chr2 16808430 16808489 -233879365 - L1ME LINE L1 -280 5841 5781 1645 96 42 27 chr2 16810596 16810857 -233876997 + AluY SINE Alu 36 300 -11 473 369 5 0 chr2 16810952 16811139 -233876715 + MIR SINE MIR 65 252 -10 826 145 24 92 chr2 16811497 16811704 -233876150 - 7SK RNA RNA 0 193 1 3471 123 63 22 chr2 16811808 16812395 -233875459 - LTR36 LTR ERV1 0 611 1 421 343 45 0 chr2 16813151 16813329 -233874525 + MIR SINE MIR 23 208 -54 318 243 0 0 chr2 16813371 16813441 -233874413 + MIR SINE MIR 81 150 -112 284 333 36 30 chr2 16813937 16814102 -233873752 + L2 LINE L2 2208 2373 -941 381 282 19 45 chr2 16814425 16814603 -233873251 + MIR SINE MIR 42 208 -54 569 326 84 45 chr2 16814671 16815230 -233872624 + L2 LINE L2 1465 2045 -1269 256 185 46 0 chr2 16815886 16815951 -233871903 - L1ME1 LINE L1 -7 6954 6887 1466 230 21 12 chr2 16816003 16816338 -233871516 - L1ME1 LINE L1 -79 6882 6545 1148 248 25 89 chr2 16816357 16816874 -233870980 + MLT1D LTR MaLR 22 505 0 1118 241 136 50 chr2 16816874 16817331 -233870523 - L1ME1 LINE L1 -410 6551 6056 1417 220 46 76 chr2 16817333 16817910 -233869944 - MLT1E3 LTR MaLR -2 622 1 1358 228 21 75 chr2 16817910 16818379 -233869475 - L1ME1 LINE L1 -881 6060 5617 300 252 84 7 chr2 16818374 16818517 -233869337 + L1M4 LINE L1 2836 2989 -3157 * 1745 32 0 0 chr2 16818586 16818802 -233869052 - L1PA4 LINE L1 -914 5232 5017 7018 34 19 35 chr2 16818802 16819747 -233868107 + L1PA4 LINE L1 5223 6152 -3 2929 272 76 26 chr2 16819794 16821206 -233866648 + L1M4 LINE L1 3073 4554 -1592 300 250 42 0 chr2 16821203 16821299 -233866555 - L1ME1 LINE L1 -3663 3278 3179 * 1317 276 64 29 chr2 16821403 16822032 -233865822 + MER49 LTR ERV1 94 923 0 1097 282 65 45 chr2 16822033 16822215 -233865639 - L1ME1 LINE L1 -4136 2986 2809 2526 71 0 3 chr2 16822215 16822524 -233865330 - AluY SINE Alu -3 308 1 1097 282 65 45 chr2 16822524 16823100 -233864754 - L1ME1 LINE L1 -4313 2809 2213 381 186 24 0 chr2 16823102 16823226 -233864628 + (TA)n Simple_repeat Simple_repeat 1 127 0 1213 241 47 39 chr2 16823260 16824025 -233863829 - L1ME1 LINE L1 -4891 1532 1218 388 297 113 21 chr2 16824112 16824439 -233863415 - L1ME1 LINE L1 -6056 367 11 27 49 0 0 chr2 16825512 16825553 -233862301 + AT_rich Low_complexity Low_complexity 1 41 0 236 169 15 46 chr2 16826067 16826132 -233861722 - HAL1b LINE L1 -535 813 751 1931 151 3 0 chr2 16826854 16827165 -233860689 + AluSx SINE Alu 1 312 0 941 193 22 37 chr2 16827417 16827793 -233860061 - MER4C LTR ERV1 0 695 149 646 152 12 109 chr2 16827868 16827948 -233859906 - MER4C LTR ERV1 -316 149 92 202 28 28 28 chr2 16827948 16827984 -233859870 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 646 152 12 109 chr2 16827984 16828068 -233859786 - MER4C LTR ERV1 -373 92 1 576 246 80 6 chr2 16828297 16828472 -233859382 + L1MCa LINE L1 7 194 -6232 758 187 97 87 chr2 16828472 16828782 -233859072 - LTR48 LTR ERV1 0 787 475 2486 138 44 50 chr2 16828915 16829415 -233858439 + L1MC2 LINE L1 5833 6329 -15 2853 254 107 44 chr2 16829541 16831729 -233856125 + L1M4 LINE L1 2262 4619 -1527 1455 141 52 19 chr2 16831743 16832013 -233855841 - Tigger7 DNA MER2_type -1 2486 2208 370 250 12 0 chr2 16832016 16832096 -233855758 - Tigger7 DNA MER2_type -380 170 90 2563 126 40 75 chr2 16832102 16832449 -233855405 - L1PA16 LINE L1 -9 6157 5830 426 39 0 0 chr2 16832449 16832501 -233855353 + (TG)n Simple_repeat Simple_repeat 2 53 0 2563 126 40 75 chr2 16832501 16832647 -233855207 - L1PA16 LINE L1 -336 5830 5681 815 214 21 31 chr2 16832652 16832844 -233855010 + L1P LINE L1 4833 5022 -1124 582 162 9 9 chr2 16832845 16832950 -233854904 - Tigger7 DNA MER2_type -2374 113 9 1247 271 40 4 chr2 16832961 16833414 -233854440 + L1M4 LINE L1 4639 5107 -1039 299 294 50 25 chr2 16833601 16833720 -233854134 - L2 LINE L2 0 3313 3192 2093 93 20 3 chr2 16835320 16835620 -233852234 - AluSq SINE Alu -8 305 1 310 316 115 0 chr2 16837046 16837185 -233850669 - MIR SINE MIR -6 256 102 401 382 51 0 chr2 16837576 16837754 -233850100 - L2 LINE L2 0 3272 3086 231 181 24 24 chr2 16839074 16839157 -233848697 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 2270 104 0 0 chr2 16839835 16840134 -233847720 - AluSx SINE Alu -13 299 1 3130 112 73 20 chr2 16840331 16840821 -233847033 - MER1A DNA MER1_type -13 516 1 27 62 0 0 chr2 16840949 16840997 -233846857 + AT_rich Low_complexity Low_complexity 1 48 0 269 253 0 13 chr2 16841046 16841121 -233846733 + (TG)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr2 16841143 16841171 -233846683 + AT_rich Low_complexity Low_complexity 1 28 0 7152 49 5 2 chr2 16841191 16842174 -233845680 + L1PA5 LINE L1 5163 6148 -6 285 314 95 0 chr2 16842422 16842527 -233845327 + MIR SINE MIR 128 242 -20 2263 82 0 0 chr2 16842677 16842970 -233844884 + AluY SINE Alu 2 294 -17 1966 131 3 14 chr2 16843851 16843981 -233843873 + AluSx SINE Alu 1 131 -181 423 0 0 0 chr2 16843981 16844028 -233843826 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1966 131 3 14 chr2 16844028 16844188 -233843666 + AluSx SINE Alu 131 288 -24 223 323 108 0 chr2 16844458 16844551 -233843303 + L2 LINE L2 3170 3272 0 385 313 21 28 chr2 16844599 16844743 -233843111 - MIR3 SINE MIR 0 208 66 203 350 50 12 chr2 16845018 16845098 -233842756 - MIR SINE MIR -109 99 17 2371 80 7 0 chr2 16845142 16845443 -233842411 + AluSc SINE Alu 1 303 -6 282 292 92 17 chr2 16845597 16845717 -233842137 - L2 LINE L2 -1 3312 3184 554 304 70 10 chr2 16850441 16850642 -233837212 - MIR SINE MIR -41 221 9 274 250 125 25 chr2 16850958 16851038 -233836816 + L2 LINE L2 3185 3272 0 23 0 0 0 chr2 16851411 16851434 -233836420 + AT_rich Low_complexity Low_complexity 1 23 0 399 336 93 22 chr2 16851932 16852158 -233835696 - MIR SINE MIR -2 260 19 1848 221 100 18 chr2 16852632 16853294 -233834560 - L1M4 LINE L1 -2896 3250 2535 755 219 6 0 chr2 16853303 16853472 -233834382 - L1MB7 LINE L1 -19 6165 5996 5773 55 25 1 chr2 16853821 16854555 -233833299 - L1PA7 LINE L1 -3 6151 5401 355 318 121 20 chr2 16855064 16855262 -233832592 - L3b LINE CR1 -227 1356 1139 185 356 58 0 chr2 16855359 16855446 -233832408 - MIR SINE MIR -122 140 49 700 207 29 23 chr2 16855446 16855620 -233832234 + MER5B DNA MER1_type 4 178 0 3678 164 17 5 chr2 16855626 16856286 -233831568 + L1PA13 LINE L1 4486 5153 -993 4967 125 6 31 chr2 16856317 16857151 -233830703 + L1PA13 LINE L1 5347 6159 -4 402 238 158 67 chr2 16857166 16857330 -233830524 - MER5A DNA MER1_type -1 188 10 679 297 8 1 chr2 16857349 16857526 -233830328 + MER5B DNA MER1_type 1 189 0 387 355 20 0 chr2 16857741 16857893 -233829961 + L3 LINE CR1 1255 1409 -168 870 289 76 65 chr2 16857966 16858664 -233829190 + L2 LINE L2 2457 3172 -141 522 279 8 0 chr2 16858653 16858775 -233829079 - L2 LINE L2 0 3313 3191 * 290 278 42 68 chr2 16858779 16858939 -233828915 + L2 LINE L2 3128 3309 0 27 0 0 0 chr2 16858939 16858966 -233828888 + AT_rich Low_complexity Low_complexity 1 27 0 584 233 92 18 chr2 16859098 16859200 -233828654 + MER5A DNA MER1_type 10 130 -59 998 179 0 18 chr2 16859200 16859368 -233828486 - FAM SINE Alu -9 166 2 584 233 92 18 chr2 16859368 16859428 -233828426 + MER5A DNA MER1_type 130 184 -5 208 246 46 0 chr2 16859435 16859500 -233828354 - MIR3 SINE MIR -51 157 90 404 305 73 13 chr2 16860525 16860676 -233827178 + MIR SINE MIR 12 171 -91 205 284 90 0 chr2 16861182 16861249 -233826605 + MER5B DNA MER1_type 86 158 -20 583 340 47 13 chr2 16861799 16862034 -233825820 - MIR SINE MIR 0 262 20 201 229 0 0 chr2 16862306 16862354 -233825500 + CT-rich Low_complexity Low_complexity 4 51 0 334 353 191 13 chr2 16862436 16862739 -233825115 + L2 LINE L2 2897 3253 -19 2172 162 45 38 chr2 16863773 16864198 -233823656 - MSTA LTR MaLR 0 428 1 337 339 48 58 chr2 16864203 16864392 -233823462 + L2 LINE L2 3125 3311 -2 216 77 51 51 chr2 16864415 16864454 -233823400 - MIR SINE MIR -106 156 118 186 369 0 0 chr2 16865204 16865269 -233822585 - L2 LINE L2 -62 3210 3146 214 322 0 0 chr2 16865913 16865972 -233821882 - L2 LINE L2 -51 3221 3163 484 321 71 19 chr2 16866168 16866380 -233821474 - MIR SINE MIR -28 234 12 664 200 36 6 chr2 16867656 16867821 -233820033 + L1ME3 LINE L1 5786 5955 -207 204 263 145 0 chr2 16867912 16867988 -233819866 + L2 LINE L2 2935 3021 -251 2451 71 0 0 chr2 16868170 16868466 -233819388 - AluY SINE Alu -15 296 1 221 333 83 0 chr2 16869351 16869447 -233818407 + MIR SINE MIR 51 133 -75 449 312 91 74 chr2 16870193 16870546 -233817308 - L2 LINE L2 0 3272 2914 4607 181 25 22 chr2 16871437 16872408 -233815446 + L1MA9 LINE L1 5339 6312 0 1155 273 52 9 chr2 16873096 16873594 -233814260 + MER69 DNA AcHobo 8 568 -658 745 236 239 14 chr2 16873582 16874009 -233813845 + MER69 DNA AcHobo 2000 2522 -4 * 200 301 12 36 chr2 16875235 16875318 -233812536 + MIR SINE MIR 54 134 -74 448 201 65 26 chr2 16875472 16875626 -233812228 - MER103 DNA DNA -4 162 3 438 88 0 0 chr2 16876311 16876379 -233811475 + (TGGA)n Simple_repeat Simple_repeat 2 69 0 191 284 30 0 chr2 16876599 16876666 -233811188 - L2 LINE L2 -73 3240 3172 300 363 79 46 chr2 16877366 16877735 -233810119 - L2 LINE L2 -663 2651 2271 260 324 19 0 chr2 16877829 16877934 -233809920 - MIR SINE MIR -10 252 146 651 270 157 22 chr2 16877941 16878171 -233809683 + MIR SINE MIR 2 262 0 260 291 10 29 chr2 16878151 16878254 -233809600 - MIR SINE MIR -93 169 69 * 233 386 26 33 chr2 16879445 16879598 -233808256 + MIR3 SINE MIR 52 203 -5 251 0 59 0 chr2 16880174 16880208 -233807646 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2238 109 0 0 chr2 16880289 16880591 -233807263 + AluSx SINE Alu 3 304 -8 190 256 0 0 chr2 16880761 16880804 -233807050 + L2 LINE L2 3262 3304 -9 2800 143 86 46 chr2 16881731 16882429 -233805425 + pTR5 LTR ERV1 741 1466 -972 4160 112 108 101 chr2 16882851 16884238 -233803616 + pTR5 LTR ERV1 66 2438 0 306 339 188 14 chr2 16884475 16884805 -233803049 + L2 LINE L2 2716 3090 -182 21 57 0 0 chr2 16885841 16885876 -233801978 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 16886976 16887013 -233800841 + AT_rich Low_complexity Low_complexity 1 37 0 195 364 64 69 chr2 16889519 16889956 -233797898 - L2 LINE L2 -14 3258 2824 546 153 14 10 chr2 16889998 16890291 -233797563 + (TA)n Simple_repeat Simple_repeat 1 294 0 343 37 19 19 chr2 16891758 16891812 -233796042 + (TG)n Simple_repeat Simple_repeat 2 55 0 316 183 19 77 chr2 16891815 16891919 -233795935 - LTR50 LTR ERVL -3 792 695 445 211 46 11 chr2 16892187 16892296 -233795558 - MLT1E1 LTR MaLR -128 509 347 345 246 140 9 chr2 16892326 16892440 -233795414 - MLT1E1 LTR MaLR -349 277 149 1856 194 7 65 chr2 16892548 16892966 -233794888 - MSTD LTR MaLR -2 394 1 908 205 82 61 chr2 16893582 16893875 -233793979 + MLT1E2 LTR MaLR 1 299 -327 652 243 24 12 chr2 16893897 16894066 -233793788 + MLT1E2 LTR MaLR 402 572 -52 1532 121 8 4 chr2 16894066 16894315 -233793539 - L1PA6 LINE L1 0 6154 5905 5241 48 3 12 chr2 16894419 16895426 -233792428 - L1PA6 LINE L1 -245 5909 4912 254 173 0 120 chr2 16895428 16895503 -233792351 + MLT1E2 LTR MaLR 559 624 0 219 88 0 0 chr2 16895640 16895674 -233792180 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 290 359 23 16 chr2 16896605 16896733 -233791121 + MIR SINE MIR 12 140 -122 280 303 22 34 chr2 16897038 16897127 -233790727 + L2 LINE L2 3185 3272 0 528 239 50 70 chr2 16897718 16897919 -233789935 - MLT1D LTR MaLR -286 219 23 2394 251 45 20 chr2 16897957 16898761 -233789093 + L1ME3A LINE L1 3611 4434 -1712 11903 200 45 20 chr2 16898800 16899567 -233788287 - L1MA9 LINE L1 -256 7077 6330 198 0 0 0 chr2 16899567 16899589 -233788265 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 11903 200 45 20 chr2 16899589 16899818 -233788036 - L1MA9 LINE L1 -1003 6330 6108 2583 40 0 0 chr2 16899818 16900117 -233787737 + AluY SINE Alu 1 299 -12 11903 200 45 20 chr2 16900117 16902835 -233785019 - L1MA9 LINE L1 -1225 6108 3275 1857 222 78 50 chr2 16902828 16903157 -233784697 - L1MA9 LINE L1 -4517 2581 2262 * 1748 185 13 0 chr2 16903157 16903459 -233784395 - AluJb SINE Alu -6 306 1 1857 222 78 50 chr2 16903459 16903482 -233784372 - L1MA9 LINE L1 -4836 2262 2241 2191 102 10 3 chr2 16903482 16903776 -233784078 - AluSg SINE Alu -14 296 1 1857 222 78 50 chr2 16903776 16904051 -233783803 - L1MA9 LINE L1 -4857 2241 1975 261 0 0 0 chr2 16904051 16904080 -233783774 + (TG)n Simple_repeat Simple_repeat 2 30 0 1857 222 78 50 chr2 16904080 16904385 -233783469 - L1MA9 LINE L1 -5123 1975 1675 300 264 55 142 chr2 16904505 16904816 -233783038 - L1MA9 LINE L1 -5552 1616 1333 238 349 6 40 chr2 16905021 16905196 -233782658 - L1MA9 LINE L1 -5967 1131 963 1761 221 18 37 chr2 16905204 16905715 -233782139 + L1ME3A LINE L1 4862 5362 -784 2014 268 25 2 chr2 16905716 16906287 -233781567 + L1ME1 LINE L1 5578 6161 -5 260 70 23 0 chr2 16906444 16906487 -233781367 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 687 148 35 0 chr2 16906487 16906602 -233781252 - AluSp/q SINE Alu -32 281 163 1420 131 4 48 chr2 16906604 16906833 -233781021 - AluSp SINE Alu -94 219 1 1381 287 123 21 chr2 16906871 16907614 -233780240 + L1ME3A LINE L1 5347 6164 -6 24 53 0 0 chr2 16908148 16908186 -233779668 + AT_rich Low_complexity Low_complexity 1 38 0 330 295 84 0 chr2 16908692 16908787 -233779067 + L2 LINE L2 3208 3310 -3 184 268 18 0 chr2 16910231 16910287 -233777567 - MIR SINE MIR 0 262 206 1549 195 7 24 chr2 16910776 16911068 -233776786 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr2 16911070 16911096 -233776758 + AT_rich Low_complexity Low_complexity 1 26 0 187 279 23 0 chr2 16912277 16912320 -233775534 + L2 LINE L2 3210 3253 -19 205 279 114 57 chr2 16912563 16912721 -233775133 - MIR3 SINE MIR -6 202 36 30 0 0 0 chr2 16913418 16913448 -233774406 + AT_rich Low_complexity Low_complexity 1 30 0 2972 97 4 21 chr2 16913449 16913914 -233773940 - L1MA3 LINE L1 -1 6304 5848 252 0 0 0 chr2 16914454 16914482 -233773372 + (A)n Simple_repeat Simple_repeat 1 28 0 279 0 0 0 chr2 16915088 16915119 -233772735 + (GA)n Simple_repeat Simple_repeat 2 32 0 1606 170 12 87 chr2 16915849 16916184 -233771670 + AluJb SINE Alu 1 310 -2 269 260 0 10 chr2 16916211 16916311 -233771543 + GA-rich Low_complexity Low_complexity 1 99 0 414 294 77 28 chr2 16917557 16917635 -233770219 + MLT1I LTR MaLR 63 136 -273 2519 118 37 55 chr2 16917635 16918069 -233769785 - MSTA LTR MaLR -2 426 1 414 294 77 28 chr2 16918069 16918238 -233769616 + MLT1I LTR MaLR 136 322 -87 2091 137 23 3 chr2 16918246 16918552 -233769302 - AluSx SINE Alu 0 312 1 302 342 27 27 chr2 16919227 16919338 -233768516 + L2 LINE L2 3162 3272 0 310 306 136 14 chr2 16920009 16920156 -233767698 + MIR SINE MIR 36 200 -62 2285 119 26 98 chr2 16921371 16921832 -233766022 + MSTA LTR MaLR 1 428 0 280 258 55 9 chr2 16921925 16922034 -233765820 + MIR SINE MIR 37 155 -66 4896 117 24 10 chr2 16922458 16923267 -233764587 + L1PA15 LINE L1 5346 6165 0 329 209 93 71 chr2 16923273 16923455 -233764399 + L1M4 LINE L1 4614 4799 -1347 447 276 30 15 chr2 16924882 16925016 -233762838 + MIR SINE MIR 126 261 -1 21 0 0 0 chr2 16925055 16925076 -233762778 + AT_rich Low_complexity Low_complexity 1 21 0 601 285 150 74 chr2 16925944 16927315 -233760539 + L1MDa LINE L1 897 2254 -841 756 231 12 0 chr2 16927472 16927645 -233760209 + LTR55 LTR ERV 4 178 -370 2064 192 50 8 chr2 16927725 16928240 -233759614 - L1 LINE L1 -1855 4291 3755 343 357 64 11 chr2 16928870 16929136 -233758718 + L1ME LINE L1 4722 5001 -1145 54 62 0 0 chr2 16929272 16929368 -233758486 + AT_rich Low_complexity Low_complexity 1 96 0 265 284 131 17 chr2 16929390 16929626 -233758228 + L1ME LINE L1 5542 5804 -317 2353 70 10 16 chr2 16929840 16930153 -233757701 - AluYa5 SINE Alu 0 311 1 472 208 47 9 chr2 16930526 16930632 -233757222 - MER81 DNA DNA -2 112 3 384 259 103 14 chr2 16931066 16931223 -233756631 - MIR SINE MIR -54 208 41 22 0 0 0 chr2 16931484 16931506 -233756348 + AT_rich Low_complexity Low_complexity 1 22 0 191 362 0 0 chr2 16932060 16932118 -233755736 - L2 LINE L2 -220 3052 2995 306 0 0 0 chr2 16933685 16933719 -233754135 + (A)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr2 16934324 16934355 -233753499 + (GA)n Simple_repeat Simple_repeat 2 32 0 342 127 32 0 chr2 16935300 16935363 -233752491 + MER53 DNA DNA 124 188 -1 311 318 47 0 chr2 16935628 16935757 -233752097 + MIR SINE MIR 64 198 -64 187 277 0 46 chr2 16935833 16935898 -233751956 + L2 LINE L2 3252 3313 0 2225 120 0 7 chr2 16936184 16936492 -233751362 + AluSq SINE Alu 1 306 -7 223 234 32 117 chr2 16936594 16936688 -233751166 + L2 LINE L2 3226 3311 -2 231 209 0 0 chr2 16936691 16936734 -233751120 - MIR SINE MIR 0 262 220 507 292 81 89 chr2 16936741 16937286 -233750568 + L2 LINE L2 2738 3272 0 276 327 161 47 chr2 16939160 16939564 -233748290 + L2 LINE L2 2336 2785 -529 372 71 0 0 chr2 16940134 16940190 -233747664 + (TC)n Simple_repeat Simple_repeat 2 57 0 258 56 0 0 chr2 16940190 16940226 -233747628 + (CA)n Simple_repeat Simple_repeat 1 36 0 201 290 16 16 chr2 16941177 16941239 -233746615 - MIR SINE MIR -5 257 196 465 133 0 0 chr2 16941241 16941316 -233746538 + (CA)n Simple_repeat Simple_repeat 2 76 0 328 319 0 0 chr2 16941329 16941423 -233746431 - MIR SINE MIR -73 189 96 363 347 102 27 chr2 16941980 16942429 -233745425 + L2 LINE L2 1491 1973 -1341 258 294 0 0 chr2 16942504 16942572 -233745282 - L2 LINE L2 -1 3312 3245 2065 120 7 7 chr2 16942754 16943053 -233744801 - AluSx SINE Alu -13 299 1 538 143 11 0 chr2 16943229 16943320 -233744534 + L1PB1 LINE L1 5691 5782 -369 2485 117 5 3 chr2 16944351 16944728 -233743126 + L1PB1 LINE L1 5769 6146 -5 442 329 41 62 chr2 16944807 16945302 -233742552 - L2 LINE L2 -226 3046 2555 189 0 0 0 chr2 16946229 16946250 -233741604 + (TTA)n Simple_repeat Simple_repeat 1 21 0 881 159 29 58 chr2 16947872 16948080 -233739774 + MLT1A1 LTR MaLR 1 202 -163 393 233 117 0 chr2 16948105 16948208 -233739646 - MER45 DNA AcHobo -61 117 3 228 326 28 85 chr2 16948344 16948485 -233739369 + MIR3 SINE MIR 3 135 -73 216 333 12 12 chr2 16948477 16948561 -233739293 + MER5A DNA MER1_type 85 168 -21 * 237 250 18 0 chr2 16948510 16948566 -233739288 - MER5B DNA MER1_type -105 73 17 3952 145 38 16 chr2 16949080 16949810 -233738044 - L1MC1 LINE L1 0 6333 5588 618 294 42 32 chr2 16949834 16950413 -233737441 - L1ME LINE L1 -358 5804 5218 351 282 125 32 chr2 16950446 16950694 -233737160 - L1ME LINE L1 -1119 5027 4757 946 152 28 128 chr2 16950751 16951001 -233736853 - L1MC1 LINE L1 -87 6246 6022 358 244 12 0 chr2 16951003 16951089 -233736765 + Charlie5 DNA MER1_type 15 101 -2511 833 267 96 81 chr2 16951263 16951941 -233735913 - L1ME LINE L1 -2749 3397 2710 2653 99 7 24 chr2 16952033 16952458 -233735396 - MER11C LTR ERVK 0 1071 654 1540 202 67 21 chr2 16952570 16952946 -233734908 - MER52A LTR ERV1 -1362 393 1 238 255 20 10 chr2 16953967 16954069 -233733785 + L1MEc LINE L1 829 931 -5465 24 0 0 0 chr2 16954301 16954325 -233733529 + AT_rich Low_complexity Low_complexity 1 24 0 416 305 138 34 chr2 16954963 16955232 -233732622 - MLT1J1 LTR MaLR -23 423 127 643 162 0 0 chr2 16955658 16955763 -233732091 + AluSg/x SINE Alu 197 301 -11 247 209 174 0 chr2 16956096 16956211 -233731643 - L1ME LINE L1 -220 5901 5767 244 235 0 44 chr2 16956263 16956331 -233731523 - MIR SINE MIR -67 195 131 852 286 11 34 chr2 16958418 16958680 -233729174 + MIR SINE MIR 2 257 -5 270 347 27 48 chr2 16959080 16959227 -233728627 - MIR3 SINE MIR -7 201 58 2013 147 7 0 chr2 16959239 16959655 -233728199 + L1PA15 LINE L1 5392 5981 -184 441 310 28 0 chr2 16959719 16959864 -233727990 - L2 LINE L2 0 3313 3165 1292 153 0 5 chr2 16959915 16960124 -233727730 + L1PA15 LINE L1 5955 6162 -3 278 294 18 28 chr2 16961762 16961871 -233725983 + MIR SINE MIR 155 262 0 1437 296 120 27 chr2 16963453 16963600 -233724254 - L2 LINE L2 -10 3303 3171 2662 191 2 23 chr2 16963600 16964072 -233723782 - MER88 LTR ERVL 0 464 3 1437 296 120 27 chr2 16964072 16964839 -233723015 - L2 LINE L2 -142 3171 2302 286 298 128 46 chr2 16965184 16965402 -233722452 - L2 LINE L2 -58 3214 2979 239 292 108 15 chr2 16965917 16966047 -233721807 + L2 LINE L2 2851 2992 -280 2096 123 3 0 chr2 16966257 16966549 -233721305 + AluSq SINE Alu 17 309 -4 482 282 70 40 chr2 16967304 16967531 -233720323 - MIR SINE MIR -8 254 21 625 286 17 0 chr2 16968520 16968698 -233719156 - MIR SINE MIR -10 252 72 1535 114 5 9 chr2 16968703 16968922 -233718932 + MER30 DNA MER1_type 13 230 0 361 302 130 47 chr2 16968924 16969153 -233718701 - HAL1 LINE L1 -1148 1359 1098 735 226 0 0 chr2 16969153 16969268 -233718586 - FLAM_A SINE Alu -18 115 1 361 302 130 47 chr2 16969268 16969339 -233718515 - HAL1 LINE L1 -1409 1098 1034 219 171 0 0 chr2 16969650 16969685 -233718169 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 1834 187 15 80 chr2 16970369 16970780 -233717074 - MLT1B LTR MaLR -6 384 1 516 270 119 11 chr2 16970780 16970965 -233716889 - L2 LINE L2 -1008 2306 2102 188 143 0 0 chr2 16971481 16971509 -233716345 - L2 LINE L2 -5 3267 3240 236 315 41 14 chr2 16971711 16971784 -233716070 + L3b LINE CR1 1507 1581 -2 2117 112 10 3 chr2 16973425 16973721 -233714133 - AluSq SINE Alu -15 298 1 456 309 7 0 chr2 16974145 16974297 -233713557 - LTR16B LTR ERVL -303 161 9 216 328 124 48 chr2 16975195 16975509 -233712345 - L2 LINE L2 -23 3249 2912 523 256 88 37 chr2 16976015 16976100 -233711754 + L1M4 LINE L1 2944 3023 -3123 2015 126 28 0 chr2 16976100 16976385 -233711469 + AluSx SINE Alu 1 293 -19 523 256 88 37 chr2 16976385 16976572 -233711282 + L1M4 LINE L1 3023 3230 -2916 1073 270 76 5 chr2 16976634 16977042 -233710812 + L1M4 LINE L1 3364 3800 -2346 204 133 50 0 chr2 16977095 16977155 -233710699 + (TA)n Simple_repeat Simple_repeat 2 64 0 625 247 108 71 chr2 16977358 16977844 -233710010 + MLT1F LTR MaLR 44 538 -4 256 303 42 34 chr2 16978644 16978763 -233709091 + L2 LINE L2 3160 3279 -34 324 338 93 36 chr2 16978854 16978993 -233708861 + L2 LINE L2 3124 3270 -2 271 312 124 25 chr2 16979159 16979320 -233708534 - MIR SINE MIR -50 212 35 193 270 22 34 chr2 16979397 16979486 -233708368 + MIR SINE MIR 78 165 -97 58 87 0 0 chr2 16979501 16979650 -233708204 + AT_rich Low_complexity Low_complexity 1 149 0 388 323 55 0 chr2 16980566 16980693 -233707161 - MIR SINE MIR -109 153 20 258 322 59 0 chr2 16981055 16981173 -233706681 - MIR3 SINE MIR -26 182 58 491 210 0 10 chr2 16981213 16981313 -233706541 + MER94 DNA DNA 2 100 -34 739 259 44 35 chr2 16981380 16981608 -233706246 - MIR SINE MIR -21 241 12 195 250 132 0 chr2 16981766 16981842 -233706012 + MIR3 SINE MIR 98 183 -25 333 362 80 0 chr2 16982004 16982167 -233705687 - MIR SINE MIR -82 180 5 1652 195 0 16 chr2 16985966 16986273 -233701581 + AluJo SINE Alu 1 302 -10 2196 100 0 0 chr2 16986337 16986653 -233701201 - AluSg SINE Alu 0 316 1 495 251 82 41 chr2 16986974 16987145 -233700709 - MER5B DNA MER1_type 0 178 1 759 279 5 15 chr2 16988325 16988526 -233699328 + MER58A DNA MER1_type 1 199 -25 246 364 46 13 chr2 16989460 16989611 -233698243 + MIR SINE MIR 77 232 -30 2127 111 16 16 chr2 16989752 16990058 -233697796 - AluSp SINE Alu -7 306 1 869 235 98 125 chr2 16990142 16990712 -233697142 - MLT1H1 LTR MaLR 0 555 1 462 305 69 20 chr2 16991073 16991276 -233696578 - MIR SINE MIR -30 232 20 352 176 20 0 chr2 16992219 16992321 -233695533 + (CA)n Simple_repeat Simple_repeat 2 105 0 419 217 66 38 chr2 16992608 16992714 -233695140 - MER103 DNA DNA -53 113 5 300 235 154 22 chr2 16992953 16993089 -233694765 - MIR3 SINE MIR -21 187 34 2968 75 6 3 chr2 16993638 16993999 -233693855 - THE1B LTR MaLR 0 364 3 196 310 86 0 chr2 16995732 16995790 -233692064 - L3 LINE CR1 -12 1565 1503 674 235 12 53 chr2 16995809 16995979 -233691875 + MER45A DNA AcHobo 16 178 0 203 133 0 0 chr2 16996141 16996171 -233691683 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 531 243 107 6 chr2 16996600 16996769 -233691085 - MIR SINE MIR -2 260 75 507 357 38 13 chr2 16996856 16997091 -233690763 - L3 LINE CR1 -87 1490 1250 438 311 0 25 chr2 16997263 16997382 -233690472 - MIR SINE MIR -133 129 14 24 0 0 0 chr2 16997932 16997956 -233689898 + AT_rich Low_complexity Low_complexity 1 24 0 633 299 61 34 chr2 17001038 17001366 -233686488 - MLT1K LTR MaLR -8 580 244 1450 182 48 4 chr2 17001699 17001968 -233685886 + MLT2B1 LTR ERVL 1 281 -239 332 297 18 45 chr2 17002069 17002180 -233685674 - L3 LINE CR1 -840 737 630 742 170 57 19 chr2 17002214 17002373 -233685481 + MLT2B2 LTR ERVL 332 496 -19 206 265 33 26 chr2 17002551 17002702 -233685152 + (CACCC)n Simple_repeat Simple_repeat 5 156 0 272 246 55 82 chr2 17002917 17003027 -233684827 + L2 LINE L2 3203 3309 -4 346 358 128 20 chr2 17003033 17003477 -233684377 - L3 LINE CR1 -814 763 272 519 327 43 14 chr2 17003795 17004006 -233683848 - MIR SINE MIR 0 262 46 208 295 196 18 chr2 17004418 17004530 -233683324 + L2 LINE L2 3140 3271 -1 330 191 107 12 chr2 17005562 17005646 -233682208 - MER81 DNA DNA -3 111 20 324 168 76 0 chr2 17005996 17006127 -233681727 + (TA)n Simple_repeat Simple_repeat 1 141 0 646 338 100 30 chr2 17006441 17006963 -233680891 - L2 LINE L2 0 3313 2761 6161 177 47 29 chr2 17006978 17007699 -233680155 - L1MC3 LINE L1 -6 7779 7024 183 100 0 0 chr2 17007699 17007729 -233680125 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6161 177 47 29 chr2 17007729 17008251 -233679603 - L1MC3 LINE L1 -761 7024 6513 294 36 455 0 chr2 17008300 17008355 -233679499 - MADE1 DNA Mariner 0 80 1 5033 222 16 9 chr2 17008377 17009473 -233678381 - L1MC3 LINE L1 -1238 6547 5445 555 315 79 21 chr2 17009699 17009978 -233677876 - MER102b DNA MER1_type 0 341 47 437 320 132 30 chr2 17010056 17010390 -233677464 - L2 LINE L2 -568 2746 2379 516 312 3 4 chr2 17010392 17010557 -233677297 - MIR SINE MIR -15 193 30 1932 176 90 9 chr2 17011612 17012044 -233675810 - MLT1C LTR MaLR 0 467 1 252 0 0 0 chr2 17012591 17012619 -233675235 + (TC)n Simple_repeat Simple_repeat 1 28 0 2107 159 63 0 chr2 17014012 17014363 -233673491 + MER83C LTR ERV1 1 373 0 267 302 108 23 chr2 17015037 17015166 -233672688 + MIR SINE MIR 2 141 -121 223 293 17 0 chr2 17015232 17015290 -233672564 + L2 LINE L2 3233 3291 -22 721 266 112 17 chr2 17015440 17015673 -233672181 + MIR SINE MIR 8 262 0 265 149 43 0 chr2 17015988 17016035 -233671819 - L2 LINE L2 0 3313 3265 1170 203 159 22 chr2 17017076 17017441 -233670413 - Tigger5 DNA MER2_type 0 2323 4 308 216 182 0 chr2 17017557 17017645 -233670209 + MER5A DNA MER1_type 83 186 -3 364 244 35 0 chr2 17017741 17017827 -233670027 - L2 LINE L2 -2044 1270 1182 556 159 10 3 chr2 17017827 17017946 -233669908 + MLT1D LTR MaLR 350 505 0 494 291 119 0 chr2 17017989 17018199 -233669655 + MLT1J2 LTR MaLR 198 432 -18 1648 158 31 58 chr2 17020101 17020482 -233667372 + MLT1B LTR MaLR 20 390 0 218 278 28 14 chr2 17020825 17020897 -233666957 + L2 LINE L2 3240 3312 -1 239 412 76 0 chr2 17020961 17021092 -233666762 - L2 LINE L2 -5 3267 3127 788 136 0 14 chr2 17071697 17071837 -233616017 + L1MA4 LINE L1 6159 6296 -4 180 293 147 13 chr2 17071997 17072072 -233615782 + L2 LINE L2 3187 3271 -1 197 333 106 0 chr2 17072205 17072346 -233615508 + L2 LINE L2 2898 3053 -219 6944 114 16 19 chr2 17073063 17074766 -233613088 - L1MA3 LINE L1 0 6305 4605 298 283 57 38 chr2 17074826 17074932 -233612922 - MIR3 SINE MIR -41 167 60 361 312 39 54 chr2 17076217 17076422 -233611432 - L2 LINE L2 0 3313 3112 190 254 79 16 chr2 17076574 17076637 -233611217 + L2 LINE L2 2969 3035 -237 999 70 0 0 chr2 17077631 17077760 -233610094 - L1PBa LINE L1 -6728 135 7 2714 23 0 0 chr2 17077760 17078064 -233609790 - AluYa5 SINE Alu -7 304 1 262 275 64 9 chr2 17078558 17078667 -233609187 - MIR SINE MIR -78 130 16 304 316 65 36 chr2 17079171 17079310 -233608544 + L2 LINE L2 3125 3267 -5 26 30 0 0 chr2 17079521 17079554 -233608300 + AT_rich Low_complexity Low_complexity 1 33 0 335 348 76 8 chr2 17080246 17080364 -233607490 - MIR SINE MIR -59 149 24 485 259 265 6 chr2 17081657 17081827 -233606027 - MIR SINE MIR -33 229 16 239 182 0 0 chr2 17081949 17081993 -233605861 + MIR SINE MIR 109 152 -110 455 305 93 43 chr2 17082089 17082391 -233605463 + HERVL LTR ERVL 2448 2764 -2890 258 288 68 0 chr2 17085190 17085263 -233602591 + MIR SINE MIR 46 123 -139 212 196 0 43 chr2 17086113 17086159 -233601695 - MIR SINE MIR 0 262 219 186 306 124 33 chr2 17086673 17086794 -233601060 - MIR SINE MIR -116 146 15 360 309 59 25 chr2 17088018 17088254 -233599600 + L1MC5 LINE L1 4360 4603 -1543 648 240 0 0 chr2 17088255 17088434 -233599420 + (TA)n Simple_repeat Simple_repeat 2 180 0 250 289 0 0 chr2 17088441 17088531 -233599323 - L1MC4 LINE L1 -1339 6703 6614 25 0 0 0 chr2 17088575 17088600 -233599254 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr2 17088622 17088644 -233599210 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2377 112 27 3 chr2 17088697 17089063 -233598791 + THE1C LTR MaLR 1 375 0 6991 182 128 62 chr2 17089063 17090536 -233597318 + THE1C-int LTR MaLR 1 1571 -9 2193 134 21 21 chr2 17090546 17090919 -233596935 + THE1C LTR MaLR 3 375 0 1324 191 0 0 chr2 17090922 17091174 -233596680 - L1 LINE L1 -1799 4347 4096 * 5889 162 7 4 chr2 17091166 17092867 -233594987 + L1PB1 LINE L1 4437 6146 -5 33 25 0 0 chr2 17092874 17092914 -233594940 + AT_rich Low_complexity Low_complexity 1 40 0 1707 99 63 0 chr2 17092914 17093200 -233594654 + L1PA14 LINE L1 5884 6185 0 1784 271 58 38 chr2 17093299 17094013 -233593841 + L1MC5 LINE L1 4762 5066 -1080 2207 99 7 13 chr2 17094013 17094316 -233593538 - AluSx SINE Alu -11 301 1 1784 271 58 38 chr2 17094316 17094662 -233593192 + L1MC5 LINE L1 5066 5403 -743 1089 245 82 68 chr2 17094940 17095515 -233592339 + L1MC5 LINE L1 6637 7219 -742 284 164 194 0 chr2 17095706 17095773 -233592081 + MER116 DNA Mariner 1 80 0 541 256 70 58 chr2 17095778 17096247 -233591607 + L1MC5 LINE L1 7357 7831 -130 1248 258 101 90 chr2 17097050 17097292 -233590562 + MLT1E LTR MaLR 1 239 -354 2820 148 6 48 chr2 17097292 17097787 -233590067 + MER101 LTR ERV1 1 474 0 1248 258 101 90 chr2 17097787 17098080 -233589774 + MLT1E LTR MaLR 239 542 -51 224 370 0 0 chr2 17098426 17098499 -233589355 - L2 LINE L2 0 3272 3200 234 136 0 0 chr2 17098733 17098777 -233589077 + (A)n Simple_repeat Simple_repeat 1 44 0 29 70 0 0 chr2 17099193 17099250 -233588604 + AT_rich Low_complexity Low_complexity 1 57 0 315 273 184 24 chr2 17099660 17100030 -233587824 - L1M4 LINE L1 -2535 3611 3183 4645 209 40 10 chr2 17100267 17100981 -233586873 - L1 LINE L1 -2546 3600 2836 2064 148 0 6 chr2 17100981 17101292 -233586562 - AluSq SINE Alu -4 309 1 4645 209 40 10 chr2 17101292 17101738 -233586116 - L1 LINE L1 -3310 2836 2405 8541 169 19 16 chr2 17101752 17104431 -233583423 + L1MA5A LINE L1 3595 6280 -17 249 302 112 39 chr2 17104461 17104792 -233583062 - L1M4 LINE L1 -3385 2761 2407 1888 152 19 45 chr2 17104884 17105258 -233582596 + THE1B LTR MaLR 1 364 0 11406 108 10 1 chr2 17105258 17106823 -233581031 + THE1B-int LTR MaLR 1 1579 -1 1881 152 16 51 chr2 17106825 17107200 -233580654 + THE1B LTR MaLR 3 364 0 272 256 60 15 chr2 17107201 17107334 -233580520 - L1M4 LINE L1 -3861 2285 2147 1524 193 0 40 chr2 17107616 17107938 -233579916 - AluJb SINE Alu -3 309 1 889 274 129 11 chr2 17107993 17108373 -233579481 + LTR16B LTR ERVL 38 462 -2 2256 116 48 22 chr2 17109644 17109999 -233577855 + THE1B LTR MaLR 1 364 0 334 302 88 25 chr2 17110154 17110313 -233577541 - L1M4 LINE L1 -786 5360 5192 189 308 13 26 chr2 17110434 17110512 -233577342 + MIR SINE MIR 30 106 -102 269 333 54 0 chr2 17110626 17110719 -233577135 - MIR SINE MIR -142 120 23 337 292 108 0 chr2 17111102 17111232 -233576622 - MIR SINE MIR -14 248 105 236 300 121 66 chr2 17112595 17112868 -233574986 + L2 LINE L2 2447 2734 -580 313 319 65 36 chr2 17112900 17113038 -233574816 + MER5A DNA MER1_type 1 142 -47 557 299 110 39 chr2 17113428 17113709 -233574145 + L1MEd LINE L1 425 725 -5394 1605 235 27 64 chr2 17113811 17114372 -233573482 + L1MC5 LINE L1 6695 7234 -727 848 228 97 20 chr2 17114392 17114732 -233573122 + L1MC5 LINE L1 7250 7524 -437 1402 182 119 62 chr2 17114732 17115101 -233572753 - MLT1B LTR MaLR 0 390 1 2160 187 24 22 chr2 17115115 17115532 -233572322 - MLT1B-int LTR MaLR -15 1356 939 388 253 21 0 chr2 17115548 17115643 -233572211 - MLT1B LTR MaLR -291 99 3 316 262 90 0 chr2 17115643 17115765 -233572089 + L1MC5 LINE L1 7516 7648 -313 5643 135 28 8 chr2 17115791 17116753 -233571101 + L1MA5 LINE L1 5316 6296 -4 557 224 88 18 chr2 17116774 17117002 -233570852 + L1MC5 LINE L1 7683 7926 -35 253 301 18 0 chr2 17117159 17117272 -233570582 + L1ME3A LINE L1 4537 4651 -1495 282 143 0 0 chr2 17117333 17117382 -233570472 + (GAA)n Simple_repeat Simple_repeat 2 50 0 424 313 107 8 chr2 17117398 17117660 -233570194 + L1ME3A LINE L1 4712 4999 -1147 5880 318 82 14 chr2 17117770 17119251 -233568603 + L2 LINE L2 92 1790 -1524 180 0 0 0 chr2 17119251 17119271 -233568583 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5880 318 82 14 chr2 17119271 17120110 -233567744 + L2 LINE L2 1790 2570 -744 1609 218 56 127 chr2 17120113 17120860 -233566994 - LTR8A LTR ERV1 0 727 34 760 250 154 11 chr2 17120948 17121355 -233566499 + L2 LINE L2 2754 3235 -78 25 108 0 0 chr2 17121419 17121521 -233566333 + AT_rich Low_complexity Low_complexity 1 102 0 1044 282 52 63 chr2 17121648 17122170 -233565684 + L1ME3A LINE L1 5333 5848 -322 309 300 150 22 chr2 17123292 17123550 -233564304 + L2 LINE L2 2791 3084 -188 218 216 14 0 chr2 17125442 17125516 -233562338 + (TA)n Simple_repeat Simple_repeat 2 76 0 899 152 28 0 chr2 17128832 17129017 -233558837 - AluSc SINE Alu 0 320 132 2048 88 35 0 chr2 17129017 17129301 -233558553 - AluY SINE Alu -17 294 1 585 264 159 42 chr2 17131230 17131768 -233556086 + L1ME4a LINE L1 5373 5955 -166 346 270 9 61 chr2 17131833 17131948 -233555906 - L2 LINE L2 -47 3266 3158 334 218 52 15 chr2 17132231 17132334 -233555520 + MIR SINE MIR 42 153 -68 489 342 35 5 chr2 17132474 17132673 -233555181 - MIR SINE MIR 0 262 58 230 299 23 23 chr2 17133088 17133175 -233554679 + MIR SINE MIR 38 124 -84 282 106 0 0 chr2 17133390 17133437 -233554417 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr2 17134097 17134126 -233553728 + AT_rich Low_complexity Low_complexity 1 29 0 182 217 87 0 chr2 17134372 17134418 -233553436 + MIR SINE MIR 122 171 -91 1666 169 180 96 chr2 17134560 17135153 -233552701 + L1ME2 LINE L1 5344 5986 -178 396 280 69 52 chr2 17135337 17135759 -233552095 - L1 LINE L1 -3045 3101 2673 484 304 77 0 chr2 17136082 17136289 -233551565 + Charlie8 DNA MER1_type 1570 1792 -625 533 230 44 88 chr2 17137912 17138138 -233549716 - L2 LINE L2 -1 3312 3097 2175 110 3 0 chr2 17138653 17138944 -233548910 + AluSq SINE Alu 1 292 -21 1824 186 39 14 chr2 17139271 17139686 -233548168 - L1PBa LINE L1 -5834 1029 605 1395 246 99 8 chr2 17139699 17140195 -233547659 - L1PBa LINE L1 -6316 547 7 2035 246 74 49 chr2 17140205 17140573 -233547281 + L1M4 LINE L1 3504 3861 -2285 1527 177 9 40 chr2 17140573 17140895 -233546959 + AluJo SINE Alu 1 312 0 2035 246 74 49 chr2 17140895 17141360 -233546494 + L1M4 LINE L1 3861 4358 -1788 769 313 18 3 chr2 17141533 17141859 -233545995 + L1ME3A LINE L1 2669 2999 -3147 22 0 0 0 chr2 17142118 17142140 -233545714 + AT_rich Low_complexity Low_complexity 1 22 0 1165 241 90 115 chr2 17142234 17143300 -233544554 + L1ME3A LINE L1 4013 5051 -1095 297 0 0 0 chr2 17143476 17143509 -233544345 + (CA)n Simple_repeat Simple_repeat 2 34 0 251 308 8 8 chr2 17143509 17143626 -233544228 + L1ME3A LINE L1 5321 5437 -727 2774 177 4 2 chr2 17143631 17144133 -233543721 + L1PA8 LINE L1 1 503 -5372 25958 143 10 20 chr2 17144161 17149890 -233537964 + L1PA8 LINE L1 797 6476 -11 755 275 112 25 chr2 17149871 17150308 -233537546 + L1ME3A LINE L1 5416 5890 -280 * 1006 261 57 63 chr2 17150335 17150739 -233537115 - MER45C DNA AcHobo -502 451 1 890 255 34 40 chr2 17150805 17151103 -233536751 + L1MC4 LINE L1 6810 7105 -937 272 247 0 12 chr2 17151171 17151252 -233536602 + L1MC5 LINE L1 7002 7081 -880 513 320 76 0 chr2 17151343 17151568 -233536286 + L1MC4 LINE L1 7189 7430 -612 366 266 83 18 chr2 17151552 17151770 -233536084 + L1MC5 LINE L1 7252 7483 -478 * 284 270 184 9 chr2 17151849 17152062 -233535792 + L1MC4 LINE L1 7648 8025 -17 2221 194 41 59 chr2 17154283 17154398 -233533456 - MER54A LTR ERVL 0 644 528 1392 40 0 60 chr2 17154398 17154598 -233533256 + L1PA6 LINE L1 5967 6154 0 2221 194 41 59 chr2 17154598 17154637 -233533217 - MER54A LTR ERVL -116 528 490 8194 75 2 4 chr2 17154637 17155710 -233532144 - MER11C LTR ERVK 0 1071 1 2221 194 41 59 chr2 17155710 17156419 -233531435 - MER54A LTR ERVL -154 490 1 1270 256 109 41 chr2 17156483 17156951 -233530903 + MLT1D LTR MaLR 6 505 0 390 261 27 60 chr2 17157037 17157221 -233530633 - MER5B DNA MER1_type 0 178 1 296 223 330 10 chr2 17157241 17157344 -233530510 + L2 LINE L2 3137 3272 0 1330 264 89 33 chr2 17157492 17157976 -233529878 - MLT1J LTR MaLR 0 511 1 188 300 0 0 chr2 17158075 17158125 -233529729 - L2 LINE L2 -259 3054 3005 194 253 103 46 chr2 17158863 17158950 -233528904 - MIR SINE MIR -7 255 164 229 331 84 28 chr2 17159717 17159859 -233527995 + L2 LINE L2 2905 3054 -218 282 278 83 30 chr2 17160267 17160400 -233527454 - L2 LINE L2 -171 3142 3003 21 36 0 0 chr2 17160938 17160966 -233526888 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 17162711 17162753 -233525101 + AT_rich Low_complexity Low_complexity 1 42 0 5235 72 0 16 chr2 17162770 17163480 -233524374 - L1PA7 LINE L1 -1668 4478 3780 6702 74 1 0 chr2 17163484 17165157 -233522697 + L1PA7 LINE L1 4466 6143 -11 438 207 0 26 chr2 17165251 17165367 -233522487 - HAL1 LINE L1 -105 2402 2290 6438 176 65 12 chr2 17165469 17167038 -233520816 - L1M1 LINE L1 -4065 1263 2 2765 178 41 6 chr2 17167049 17167589 -233520265 - L1 LINE L1 -1957 4189 3631 23 33 0 0 chr2 17167595 17167625 -233520229 + AT_rich Low_complexity Low_complexity 1 30 0 307 274 71 0 chr2 17167630 17167743 -233520111 - HAL1 LINE L1 -865 1642 1522 523 290 44 1 chr2 17167878 17168035 -233519819 + MIR SINE MIR 8 172 -36 21 0 0 0 chr2 17169152 17169173 -233518681 + AT_rich Low_complexity Low_complexity 1 21 0 2507 222 83 32 chr2 17169617 17170365 -233517489 - L1MB7 LINE L1 -10 6174 5389 183 345 160 8 chr2 17170383 17170502 -233517352 - MIR SINE MIR -56 152 16 25 31 0 0 chr2 17170544 17170576 -233517278 + AT_rich Low_complexity Low_complexity 1 32 0 207 191 0 43 chr2 17170729 17170776 -233517078 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 323 356 44 7 chr2 17172369 17172504 -233515350 + MIR3 SINE MIR 9 148 -60 240 355 77 69 chr2 17172516 17172907 -233514947 - LTR16C LTR ERVL -12 479 86 1284 141 5 0 chr2 17173087 17173296 -233514558 + L1PB3 LINE L1 5954 6160 -345 977 111 6 22 chr2 17173296 17173476 -233514378 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 1284 141 5 0 chr2 17173476 17173638 -233514216 + L1PB3 LINE L1 6160 6505 0 371 260 39 78 chr2 17173728 17173811 -233514043 - MIR SINE MIR -87 175 99 878 216 72 29 chr2 17173811 17174019 -233513835 - MER20 DNA MER1_type -2 217 1 371 260 39 78 chr2 17174019 17174089 -233513765 - MIR SINE MIR -163 99 28 204 91 61 0 chr2 17174320 17174353 -233513501 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 403 306 80 86 chr2 17174362 17174699 -233513155 - L2 LINE L2 -2 3270 2936 288 344 23 31 chr2 17175798 17175926 -233511928 + MER5A DNA MER1_type 63 189 0 1499 289 98 14 chr2 17177079 17177939 -233509915 - L2 LINE L2 -5 3308 2377 689 270 90 17 chr2 17179185 17179257 -233508597 - MIR SINE MIR -7 255 190 1444 87 73 23 chr2 17179257 17179476 -233508378 - MER30 DNA MER1_type 0 230 1 689 270 90 17 chr2 17179476 17179636 -233508218 - MIR SINE MIR -72 190 6 1887 157 0 3 chr2 17180156 17180456 -233507398 + AluJo SINE Alu 13 311 -1 294 326 79 28 chr2 17180960 17181175 -233506679 - MIR SINE MIR -34 228 3 1672 172 48 43 chr2 17182286 17182658 -233505196 - THE1C LTR MaLR -1 374 1 407 305 92 62 chr2 17183451 17183756 -233504098 + HAL1 LINE L1 812 1125 -1382 12789 86 37 2 chr2 17183999 17186507 -233501347 - L1PA7 LINE L1 -3 6151 3437 345 298 14 20 chr2 17186710 17186872 -233500982 + L1M4c LINE L1 1549 1913 -830 470 277 31 13 chr2 17186872 17187031 -233500823 - MLT1K LTR MaLR -8 580 419 409 257 45 56 chr2 17187902 17188081 -233499773 - MER5B DNA MER1_type -1 177 1 6433 32 0 4 chr2 17189009 17189783 -233498071 - L1PA4 LINE L1 -3 6152 5382 6172 278 94 16 chr2 17190281 17192527 -233495327 + L2 LINE L2 299 2718 -596 925 252 47 50 chr2 17192526 17192844 -233495010 + L2 LINE L2 2991 3307 -6 * 39 68 0 0 chr2 17192888 17192962 -233494892 + AT_rich Low_complexity Low_complexity 1 74 0 286 369 40 0 chr2 17193001 17193150 -233494704 - MIR SINE MIR -2 260 106 21 0 0 0 chr2 17193891 17193912 -233493942 + AT_rich Low_complexity Low_complexity 1 21 0 1044 146 39 10 chr2 17194132 17194338 -233493516 - L1PA13 LINE L1 -2 6161 5950 1126 124 6 0 chr2 17194446 17194615 -233493239 - L1PA13 LINE L1 -382 5779 5610 23 0 0 0 chr2 17195084 17195107 -233492747 + AT_rich Low_complexity Low_complexity 1 23 0 288 155 0 107 chr2 17195774 17195858 -233491996 + L1MB4 LINE L1 6106 6180 0 201 306 0 0 chr2 17196182 17196231 -233491623 - MIR SINE MIR -24 238 190 2182 162 50 29 chr2 17197714 17198195 -233489659 + L1MC2 LINE L1 5852 6342 -2 576 288 131 4 chr2 17199907 17200136 -233487718 + MIR SINE MIR 2 259 -3 26 0 0 0 chr2 17201152 17201178 -233486676 + AT_rich Low_complexity Low_complexity 1 26 0 1960 281 139 8 chr2 17201824 17202748 -233485106 - L2 LINE L2 -10 3303 2256 467 284 86 25 chr2 17204353 17204515 -233483339 - MIR SINE MIR -16 246 75 385 283 33 8 chr2 17204535 17204655 -233483199 - L2 LINE L2 0 3313 3191 2100 91 7 11 chr2 17205018 17205336 -233482518 + AluSq SINE Alu 1 317 0 234 215 187 56 chr2 17205372 17205479 -233482375 + L2 LINE L2 3192 3312 -1 308 253 13 13 chr2 17205637 17205712 -233482142 + MIR3 SINE MIR 85 159 -49 356 237 254 34 chr2 17206287 17206464 -233481390 - MIR SINE MIR -10 252 37 23 33 0 0 chr2 17207122 17207152 -233480702 + AT_rich Low_complexity Low_complexity 1 30 0 2274 87 7 0 chr2 17208478 17208778 -233479076 - AluY SINE Alu -9 302 1 200 143 18 71 chr2 17208938 17208994 -233478860 + L2 LINE L2 2294 2346 -968 1992 110 0 33 chr2 17209721 17210022 -233477832 + AluSg SINE Alu 1 291 -19 259 202 11 43 chr2 17213783 17213877 -233473977 + (CCCCG)n Simple_repeat Simple_repeat 5 95 0 229 289 138 58 chr2 17216124 17216349 -233471505 + L2 LINE L2 3015 3257 -56 22 0 0 0 chr2 17216806 17216828 -233471026 + AT_rich Low_complexity Low_complexity 1 22 0 275 382 65 58 chr2 17217030 17217595 -233470259 + L2 LINE L2 2398 2966 -348 535 286 74 30 chr2 17218218 17218449 -233469405 + MIR SINE MIR 3 243 -19 790 197 32 92 chr2 17218490 17218708 -233469146 - MER63A DNA MER1_type -3 207 3 201 289 0 0 chr2 17219197 17219242 -233468612 - L2 LINE L2 -19 3253 3209 447 330 81 73 chr2 17219483 17219744 -233468110 - L2 LINE L2 -5 3267 3005 213 411 28 0 chr2 17219893 17220000 -233467854 + L2 LINE L2 3177 3286 -27 276 224 141 0 chr2 17222380 17222465 -233465389 + L1ME3A LINE L1 6046 6142 -28 295 256 11 33 chr2 17222479 17222569 -233465285 + GA-rich Low_complexity Low_complexity 2 89 0 1629 171 7 10 chr2 17223806 17224104 -233463750 + AluJb SINE Alu 6 302 -10 22 56 0 0 chr2 17224384 17224420 -233463434 + AT_rich Low_complexity Low_complexity 1 36 0 36 23 0 0 chr2 17224489 17224532 -233463322 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr2 17224609 17224644 -233463210 + AT_rich Low_complexity Low_complexity 1 35 0 1190 157 5 20 chr2 17225651 17225855 -233461999 + AluJb SINE Alu 112 312 0 286 47 47 0 chr2 17226715 17226758 -233461096 + L1MC1 LINE L1 6288 6332 -1 419 276 20 20 chr2 17227138 17227251 -233460603 - MIR SINE MIR -59 149 37 207 200 57 29 chr2 17227331 17227401 -233460453 - L3b LINE CR1 -189 1394 1323 1305 229 35 10 chr2 17227406 17227716 -233460138 - MLT1C LTR MaLR -6 461 144 344 119 0 17 chr2 17227713 17227772 -233460082 + FLAM_A SINE Alu 74 131 -2 * 240 35 0 0 chr2 17227943 17227972 -233459882 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 601 324 68 30 chr2 17228331 17228757 -233459097 + L2 LINE L2 2148 2589 -725 1385 188 0 4 chr2 17228895 17229129 -233458725 + AluJo SINE Alu 24 256 -56 224 371 51 35 chr2 17230367 17230699 -233457155 - L2 LINE L2 -221 3051 2709 327 368 64 42 chr2 17230732 17231091 -233456763 - L2 LINE L2 -703 2611 2245 216 0 0 0 chr2 17231176 17231200 -233456654 + (A)n Simple_repeat Simple_repeat 1 24 0 1906 138 0 24 chr2 17232288 17232584 -233455270 + AluJo SINE Alu 11 299 -13 21 0 0 0 chr2 17234223 17234244 -233453610 + GC_rich Low_complexity Low_complexity 1 21 0 238 313 113 26 chr2 17234776 17234891 -233452963 + L2 LINE L2 3185 3309 -4 23 0 0 0 chr2 17236084 17236107 -233451747 + AT_rich Low_complexity Low_complexity 1 23 0 359 232 11 32 chr2 17238056 17238151 -233449703 - MIR3 SINE MIR -3 205 113 321 305 0 0 chr2 17239053 17239135 -233448719 + CT-rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr2 17240556 17240584 -233447270 + AT_rich Low_complexity Low_complexity 1 28 0 268 307 217 12 chr2 17242408 17242574 -233445280 + MIR SINE MIR 59 258 -4 275 269 120 9 chr2 17242726 17242834 -233445020 - L2 LINE L2 -19 3294 3175 186 287 98 16 chr2 17243721 17243843 -233444011 + MIR SINE MIR 101 232 -30 193 115 19 39 chr2 17244609 17244661 -233443193 + (CATA)n Simple_repeat Simple_repeat 4 54 0 260 236 81 73 chr2 17245150 17245325 -233442529 + MIR SINE MIR 16 184 -64 180 0 0 0 chr2 17247137 17247157 -233440697 + (A)n Simple_repeat Simple_repeat 1 20 0 2548 43 0 10 chr2 17247160 17247465 -233440389 + AluY SINE Alu 3 304 -7 392 332 50 20 chr2 17247465 17247663 -233440191 - MIR SINE MIR -25 237 34 25 0 0 0 chr2 17247690 17247715 -233440139 + AT_rich Low_complexity Low_complexity 1 25 0 389 216 94 41 chr2 17247732 17248046 -233439808 - L1MC5 LINE L1 -71 7890 7528 233 294 106 50 chr2 17248118 17248278 -233439576 + MIR SINE MIR 84 252 -10 268 288 15 0 chr2 17248289 17248355 -233439499 + GA-rich Low_complexity Low_complexity 2 68 0 209 333 39 0 chr2 17248772 17248850 -233439004 + MIR3 SINE MIR 85 165 -43 467 340 86 5 chr2 17248866 17249063 -233438791 + MIR SINE MIR 2 214 -48 255 143 131 12 chr2 17249953 17250037 -233437817 - L1ME4a LINE L1 -4 6117 6024 404 302 115 21 chr2 17250106 17250341 -233437513 - L1ME4a LINE L1 -225 5896 5640 220 204 0 0 chr2 17250704 17250748 -233437106 + (CAT)n Simple_repeat Simple_repeat 2 45 0 261 411 40 0 chr2 17251088 17251212 -233436642 - L2 LINE L2 -2 3270 3142 259 399 21 0 chr2 17251731 17251874 -233435980 + MIR SINE MIR 117 262 0 201 344 41 25 chr2 17251929 17252051 -233435803 + L2 LINE L2 3189 3312 -1 512 235 132 29 chr2 17252291 17252501 -233435353 - MIR SINE MIR -10 252 14 469 241 157 31 chr2 17252567 17252758 -233435096 - L2 LINE L2 0 3313 3099 201 259 52 0 chr2 17253554 17253612 -233434242 + MIR SINE MIR 129 189 -73 431 277 72 39 chr2 17253728 17253907 -233433947 - MIR SINE MIR -57 205 18 222 150 0 0 chr2 17253925 17253965 -233433889 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1445 211 143 46 chr2 17254110 17254564 -233433290 - MLT1J LTR MaLR -10 501 4 358 306 41 20 chr2 17254731 17254878 -233432976 + MIR3 SINE MIR 36 185 -23 204 40 0 0 chr2 17255439 17255464 -233432390 + (TA)n Simple_repeat Simple_repeat 2 26 0 537 314 77 41 chr2 17255574 17255918 -233431936 + L1M4 LINE L1 4696 5059 -1087 506 356 85 36 chr2 17256295 17256930 -233430924 - L2 LINE L2 -14 3258 2594 22 70 0 0 chr2 17257439 17257482 -233430372 + AT_rich Low_complexity Low_complexity 1 43 0 253 208 57 75 chr2 17258432 17258538 -233429316 - MIR SINE MIR -50 212 109 1342 80 0 0 chr2 17258823 17258985 -233428869 + AluSc SINE Alu 132 293 -16 22 0 0 0 chr2 17259927 17259949 -233427905 + AT_rich Low_complexity Low_complexity 1 22 0 2324 105 30 21 chr2 17260991 17261363 -233426491 + THE1C LTR MaLR 1 375 0 612 277 85 26 chr2 17261363 17261975 -233425879 - L1ME LINE L1 -357 5805 5131 351 289 87 14 chr2 17262043 17262261 -233425593 - L1ME LINE L1 -1172 4974 4741 28 29 0 0 chr2 17262454 17262489 -233425365 + AT_rich Low_complexity Low_complexity 1 35 0 225 259 27 36 chr2 17262664 17262776 -233425078 - HAL1 LINE L1 -385 2122 2012 2361 100 0 0 chr2 17262883 17263183 -233424671 + AluSx SINE Alu 5 304 -8 453 291 141 9 chr2 17263219 17263439 -233424415 - HAL1 LINE L1 -604 1903 1655 5790 155 46 12 chr2 17263465 17265241 -233422613 - L1MA8 LINE L1 -156 7554 5593 910 229 0 0 chr2 17265254 17265455 -233422399 - L1MA8 LINE L1 -4553 3012 2812 2511 71 0 3 chr2 17265624 17265933 -233421921 + AluSg SINE Alu 1 308 -2 237 276 124 48 chr2 17265972 17266077 -233421777 - MIR SINE MIR -76 132 20 929 125 8 0 chr2 17266331 17266459 -233421395 + AluJb SINE Alu 1 129 -183 212 98 0 49 chr2 17266460 17266501 -233421353 + (GAAAA)n Simple_repeat Simple_repeat 5 43 0 1162 128 0 0 chr2 17266520 17266684 -233421170 + AluJb SINE Alu 129 292 -20 501 279 134 0 chr2 17268428 17268600 -233419254 - MIR SINE MIR -24 238 44 325 295 25 25 chr2 17268822 17268944 -233418910 + L3 LINE CR1 1148 1269 -308 307 284 0 0 chr2 17268944 17269039 -233418815 + L1M4 LINE L1 4774 4868 -1278 1654 133 149 0 chr2 17269262 17269563 -233418291 + MER7A DNA MER2_type 3 346 0 21 0 0 0 chr2 17270027 17270048 -233417806 + AT_rich Low_complexity Low_complexity 1 21 0 1042 207 0 20 chr2 17270772 17270970 -233416884 - AluJb SINE Alu -32 280 87 405 284 73 19 chr2 17271191 17271506 -233416348 - L1MEd LINE L1 -865 1625 1277 2160 132 3 0 chr2 17271511 17271821 -233416033 + AluSx SINE Alu 2 312 0 35 0 0 0 chr2 17271821 17271856 -233415998 + AT_rich Low_complexity Low_complexity 1 35 0 471 231 12 24 chr2 17272010 17272179 -233415675 - L1MEd LINE L1 -4991 1128 962 391 303 66 0 chr2 17273087 17273239 -233414615 - MIR SINE MIR -13 249 88 1753 130 70 0 chr2 17273249 17273519 -233414335 + AluSg1 SINE Alu 1 289 -20 324 340 46 41 chr2 17273865 17274059 -233413795 - MIR3 SINE MIR -8 200 6 264 343 102 19 chr2 17274364 17274580 -233413274 + L2 LINE L2 2628 2861 -453 230 301 125 7 chr2 17274734 17274870 -233412984 + L2 LINE L2 3161 3312 -1 234 342 40 0 chr2 17275110 17275186 -233412668 + MIR SINE MIR 36 114 -148 192 152 0 0 chr2 17275266 17275299 -233412555 + CT-rich Low_complexity Low_complexity 2 34 0 439 224 47 0 chr2 17275634 17275741 -233412113 + MER94 DNA DNA 7 118 -16 1018 263 79 67 chr2 17275755 17276234 -233411620 + L2 LINE L2 2825 3309 -4 2297 70 10 3 chr2 17276748 17277049 -233410805 - AluY SINE Alu -5 306 4 339 278 10 10 chr2 17277221 17277318 -233410536 - MIR SINE MIR -67 141 45 212 254 34 0 chr2 17277661 17277720 -233410134 + MIR SINE MIR 99 159 -103 338 289 10 10 chr2 17278158 17278255 -233409599 + MIR SINE MIR 45 141 -67 237 235 134 8 chr2 17278500 17278619 -233409235 - L1ME4a LINE L1 -3 6118 5985 351 239 31 63 chr2 17279027 17279247 -233408607 - L1ME4a LINE L1 -298 5823 5637 867 305 81 44 chr2 17279834 17280448 -233407406 - L2 LINE L2 -410 2904 2268 539 335 53 8 chr2 17281665 17281910 -233405944 - MIR SINE MIR 0 262 7 301 287 78 35 chr2 17282562 17282677 -233405177 + MIR3 SINE MIR 73 192 -16 182 336 33 33 chr2 17283652 17283774 -233404080 - L2 LINE L2 -220 3052 2931 441 0 0 0 chr2 17284209 17284258 -233403596 + (CA)n Simple_repeat Simple_repeat 2 50 0 251 275 27 101 chr2 17284435 17284584 -233403270 - L2 LINE L2 -636 2678 2541 * 363 300 12 0 chr2 17284556 17284691 -233403163 + MIR SINE MIR 34 169 -67 531 250 22 7 chr2 17285166 17285302 -233402552 - MIR3 SINE MIR -9 199 62 212 345 177 0 chr2 17285475 17285588 -233402266 - L2 LINE L2 -1 3271 3139 455 320 156 44 chr2 17285749 17286383 -233401471 - L2 LINE L2 0 3272 2567 308 337 0 20 chr2 17286860 17286958 -233400896 + MIR SINE MIR 28 123 -139 209 122 0 24 chr2 17287844 17287885 -233399969 + (TTA)n Simple_repeat Simple_repeat 3 42 0 290 328 34 8 chr2 17287995 17288114 -233399740 - MIR SINE MIR -82 180 59 267 152 0 0 chr2 17289486 17289532 -233398322 + T-rich Low_complexity Low_complexity 1 46 0 650 250 127 9 chr2 17289998 17290226 -233397628 + L1ME3A LINE L1 5584 5838 -332 240 254 71 63 chr2 17291760 17291886 -233395968 - MIR3 SINE MIR -81 127 1 181 327 0 36 chr2 17291886 17291975 -233395879 + L2 LINE L2 2644 2728 -586 224 242 16 0 chr2 17292042 17292104 -233395750 + L2 LINE L2 3207 3269 -3 187 178 0 67 chr2 17292174 17292219 -233395635 - L2 LINE L2 -90 3182 3141 1350 139 28 12 chr2 17292423 17292675 -233395179 + MLT1B LTR MaLR 1 256 -134 254 277 10 30 chr2 17292763 17292864 -233394990 - L1ME LINE L1 -333 5837 5739 659 140 18 0 chr2 17292864 17292978 -233394876 + MLT1B LTR MaLR 275 390 0 189 333 53 0 chr2 17293635 17293710 -233394144 + MIR SINE MIR 74 152 -110 24 32 0 0 chr2 17345386 17345417 -233342437 + AT_rich Low_complexity Low_complexity 1 31 0 259 277 45 54 chr2 17346038 17346150 -233341704 + MER5B DNA MER1_type 2 112 -66 551 292 40 101 chr2 17346369 17346923 -233340931 - MLT1F1 LTR MaLR -35 520 1 237 279 0 15 chr2 17347210 17347278 -233340576 + (TA)n Simple_repeat Simple_repeat 2 68 0 433 280 118 65 chr2 17347586 17348120 -233339734 + MLT1L LTR MaLR 3 492 -19 340 204 65 43 chr2 17348242 17348335 -233339519 + L1MA6 LINE L1 6203 6297 -3 237 304 51 29 chr2 17350138 17350243 -233337611 - MER5A DNA MER1_type -61 128 11 198 255 11 85 chr2 17350341 17350435 -233337419 - L2 LINE L2 0 3272 3186 225 0 0 0 chr2 17350459 17350484 -233337370 + (CAGTG)n Simple_repeat Simple_repeat 1 25 0 293 221 123 41 chr2 17350977 17351099 -233336755 + MIR3 SINE MIR 46 177 -31 180 223 87 107 chr2 17351545 17351648 -233336206 - L2 LINE L2 -218 3054 2954 238 263 0 74 chr2 17352657 17352752 -233335102 - MIR3 SINE MIR -17 191 104 1939 154 3 3 chr2 17352779 17353071 -233334783 + AluSx SINE Alu 3 294 -18 231 214 0 0 chr2 17353427 17353469 -233334385 + (CA)n Simple_repeat Simple_repeat 1 42 0 2107 289 180 12 chr2 17353634 17354762 -233333092 - L2 LINE L2 -261 3052 1735 1757 176 17 0 chr2 17355482 17355777 -233332077 - AluJb SINE Alu -12 300 1 256 311 172 0 chr2 17355871 17356051 -233331803 - L2 LINE L2 -1210 2104 1894 211 269 144 19 chr2 17356776 17356880 -233330974 + L2 LINE L2 777 893 -2421 285 272 193 0 chr2 17357470 17357584 -233330270 + L2 LINE L2 2397 2532 -782 2305 100 3 13 chr2 17357832 17358142 -233329712 - AluSq SINE Alu -6 307 1 270 250 143 0 chr2 17358379 17358463 -233329391 + MIR SINE MIR 96 191 -71 2468 71 0 0 chr2 17359158 17359454 -233328400 - AluSg SINE Alu -14 296 1 25 51 0 0 chr2 17359549 17359588 -233328266 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 17360281 17360319 -233327535 + AT_rich Low_complexity Low_complexity 1 38 0 430 205 154 77 chr2 17360547 17360703 -233327151 - MER5A DNA MER1_type -12 177 10 430 253 101 0 chr2 17360832 17360931 -233326923 + Charlie1 DNA MER1_type 3 111 -2650 534 135 10 52 chr2 17361033 17361129 -233326725 + FRAM SINE Alu 55 146 -30 658 75 9 9 chr2 17361134 17361241 -233326613 + (CA)n Simple_repeat Simple_repeat 2 108 0 2231 104 16 3 chr2 17361884 17362192 -233325662 + AluSx SINE Alu 1 312 0 1082 157 15 35 chr2 17363261 17363458 -233324396 - MER20 DNA MER1_type -3 216 24 210 333 69 40 chr2 17363656 17363830 -233324024 + MIR SINE MIR 63 241 -21 2140 147 125 2 chr2 17364041 17364464 -233323390 - L1MD1 LINE L1 0 6242 5768 2371 245 34 42 chr2 17364464 17364729 -233323125 - L1M4 LINE L1 -1473 4673 4407 5178 138 37 8 chr2 17364729 17365623 -233322231 - L1MC1 LINE L1 0 6333 5414 2371 245 34 42 chr2 17365623 17366281 -233321573 - L1M4 LINE L1 -1739 4407 3758 354 199 23 26 chr2 17366313 17366405 -233321449 - MER2 DNA MER2_type -149 90 2 1216 277 68 9 chr2 17366407 17366977 -233320877 - L1M4 LINE L1 -2377 3769 3166 786 200 0 7 chr2 17367444 17367589 -233320265 + MLT1D LTR MaLR 312 455 -50 427 219 24 65 chr2 17368286 17368409 -233319445 + L1MDa LINE L1 409 526 -6014 694 247 59 18 chr2 17368418 17368631 -233319223 + L1MDa LINE L1 420 776 -5764 334 145 118 13 chr2 17368734 17368805 -233319049 - Charlie1 DNA MER1_type -56 2705 2626 2298 113 7 0 chr2 17368805 17369115 -233318739 - AluSx SINE Alu 0 312 1 468 170 41 72 chr2 17369119 17369313 -233318541 - Charlie1 DNA MER1_type -2519 242 55 1992 188 94 30 chr2 17369595 17370064 -233317790 - MLT1D LTR MaLR 0 505 7 512 255 71 42 chr2 17370117 17370329 -233317525 - MIR SINE MIR 0 262 45 372 355 12 30 chr2 17370538 17370704 -233317150 - MIR SINE MIR -80 182 20 313 254 14 0 chr2 17371214 17371285 -233316569 - L2 LINE L2 0 3313 3242 223 327 24 54 chr2 17371721 17371889 -233315965 - L2 LINE L2 -555 2759 2597 587 80 36 27 chr2 17372645 17372757 -233315097 + CT-rich Low_complexity Low_complexity 4 116 0 2067 148 0 3 chr2 17372759 17373064 -233314790 - AluSx SINE Alu -3 309 6 1502 181 36 53 chr2 17373071 17373374 -233314480 - AluJo SINE Alu -14 298 1 1943 97 60 0 chr2 17373677 17374060 -233313794 + AluSx SINE Alu 1 399 0 2083 183 45 0 chr2 17374080 17374484 -233313370 - MER61C LTR ERV1 0 434 13 2462 72 0 3 chr2 17374833 17375138 -233312716 + AluY SINE Alu 1 304 -7 266 290 38 2 chr2 17375684 17375791 -233312063 + MIR SINE MIR 33 143 -65 1542 210 39 71 chr2 17375801 17376311 -233311543 + MLT1D LTR MaLR 1 494 -11 2046 108 32 49 chr2 17376377 17376746 -233311108 + THE1B LTR MaLR 2 364 0 207 0 0 0 chr2 17377286 17377309 -233310545 + (T)n Simple_repeat Simple_repeat 1 23 0 1558 115 0 63 chr2 17377311 17377564 -233310290 - AluSx SINE Alu -75 237 1 2575 183 84 47 chr2 17378796 17379497 -233308357 - LTR8A LTR ERV1 0 727 1 200 292 160 14 chr2 17380660 17380804 -233307050 + MIR SINE MIR 28 192 -70 747 274 160 49 chr2 17381693 17382284 -233305570 + L2 LINE L2 2381 3107 -206 2103 97 0 14 chr2 17382284 17382603 -233305251 + AluSx SINE Alu 1 315 0 747 274 160 49 chr2 17382603 17382836 -233305018 + L2 LINE L2 3107 3313 0 195 238 24 0 chr2 17386038 17386080 -233301774 + L2 LINE L2 3261 3303 -10 1540 213 7 10 chr2 17386747 17387048 -233300806 + AluJo SINE Alu 1 300 -12 2015 157 0 6 chr2 17387617 17387930 -233299924 + AluSx SINE Alu 2 312 0 275 321 37 0 chr2 17387940 17388021 -233299833 + MIR SINE MIR 2 85 -177 245 351 78 10 chr2 17388133 17388338 -233299516 - MARNA DNA Mariner -194 392 174 193 410 142 0 chr2 17388436 17388570 -233299284 - L2 LINE L2 -12 3260 3108 42 65 0 0 chr2 17388579 17388656 -233299198 + AT_rich Low_complexity Low_complexity 1 77 0 242 248 143 19 chr2 17388714 17388819 -233299035 - L2 LINE L2 -249 3064 2947 246 360 105 36 chr2 17388866 17389811 -233298043 - L2 LINE L2 -493 2821 1812 318 267 67 42 chr2 17389811 17389976 -233297878 - MIR SINE MIR 0 262 94 1291 150 0 57 chr2 17390917 17391144 -233296710 - AluJb SINE Alu -20 292 79 1365 247 138 43 chr2 17391601 17392666 -233295188 - L1ME3 LINE L1 -47 6375 5211 2418 85 3 10 chr2 17392694 17393000 -233294854 - AluSp SINE Alu -9 304 1 2343 259 82 29 chr2 17393164 17395342 -233292512 - L1ME3 LINE L1 -2968 3438 1137 250 159 87 0 chr2 17395544 17395613 -233292241 - L1MA10 LINE L1 -2 6332 6258 * 2310 227 18 18 chr2 17395608 17396283 -233291571 - L1M4 LINE L1 -1426 4720 4046 2008 147 0 43 chr2 17397617 17397943 -233289911 + AluJo SINE Alu 1 312 0 228 278 49 14 chr2 17398178 17398322 -233289532 + L1ME4a LINE L1 5970 6118 -3 1214 175 100 65 chr2 17398610 17399039 -233288815 - L1MC4 LINE L1 -884 7158 6715 743 141 0 8 chr2 17399388 17399509 -233288345 - Tigger1 DNA MER2_type -3 2415 2296 9777 124 25 5 chr2 17399511 17401098 -233286756 - Tigger1 DNA MER2_type -800 1618 1 326 179 39 13 chr2 17401192 17401270 -233286584 + L1MEc LINE L1 56 135 -6261 740 100 67 0 chr2 17401280 17401400 -233286454 - Tigger1 DNA MER2_type -665 1753 1626 1126 263 22 3 chr2 17401601 17401913 -233285941 + L1MEc LINE L1 383 700 -5696 454 222 111 26 chr2 17402287 17402404 -233285450 - L2 LINE L2 0 3313 3187 224 361 116 7 chr2 17402479 17402634 -233285220 + L3 LINE CR1 1401 1572 -5 1884 169 3 10 chr2 17403673 17403963 -233283891 + AluJo SINE Alu 1 288 -24 189 0 0 0 chr2 17403966 17403987 -233283867 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 385 292 96 55 chr2 17404160 17404451 -233283403 + HAL1 LINE L1 1076 1378 -1129 499 270 100 104 chr2 17404654 17405146 -233282708 + L1MC4a LINE L1 4906 5395 -751 1216 153 0 100 chr2 17405289 17405325 -233282529 + Tigger4(Zombi) DNA MER2_type 1 39 -2692 1968 133 0 20 chr2 17405325 17405618 -233282236 + AluSx SINE Alu 1 287 -25 1216 153 0 100 chr2 17405618 17405830 -233282024 + Tigger4(Zombi) DNA MER2_type 39 224 -2507 2254 101 90 3 chr2 17405852 17406219 -233281635 + Tigger4(Zombi) DNA MER2_type 2333 2731 0 1328 220 92 96 chr2 17406219 17407056 -233280798 + L1MC4a LINE L1 5528 6361 -1447 1114 273 102 39 chr2 17407090 17407551 -233280303 + L1MC4a LINE L1 6430 6919 -889 952 149 0 0 chr2 17407560 17407708 -233280146 + AluJb SINE Alu 147 294 -18 1168 265 38 36 chr2 17407959 17408431 -233279423 + L1MC4 LINE L1 7068 7540 -502 583 191 20 14 chr2 17408521 17408668 -233279186 + L1MC4 LINE L1 7757 7904 -138 1081 134 45 25 chr2 17408760 17408961 -233278893 + MER2 DNA MER2_type 2 206 -139 7057 32 28 2 chr2 17409071 17410604 -233277250 + L1PA4 LINE L1 4599 6155 0 2298 128 77 26 chr2 17410610 17410622 -233277232 + L1MA4A LINE L1 5814 5824 -479 2221 121 0 13 chr2 17410622 17410936 -233276918 + AluSq SINE Alu 1 310 -3 2298 128 77 26 chr2 17410936 17411352 -233276502 + L1MA4A LINE L1 5824 6264 -39 458 312 42 8 chr2 17411494 17411635 -233276219 - MIR SINE MIR -46 162 21 363 310 90 26 chr2 17411654 17411809 -233276045 - L1ME LINE L1 -578 5543 5379 452 234 60 54 chr2 17413824 17414008 -233273846 + L1MEc LINE L1 2032 2216 -4180 293 264 13 110 chr2 17414013 17414168 -233273686 + L1MB7 LINE L1 4034 4173 -1973 314 231 126 35 chr2 17414275 17414418 -233273436 + L1MB7 LINE L1 4249 4404 -1742 3585 171 97 0 chr2 17414427 17415234 -233272620 + L1MB7 LINE L1 5258 6142 -42 1825 192 103 25 chr2 17415325 17416639 -233271215 - L1MDa LINE L1 -3642 2898 1438 2029 113 10 14 chr2 17417708 17418035 -233269819 + AluSq SINE Alu 1 313 0 380 311 0 10 chr2 17418131 17418234 -233269620 + L2 LINE L2 3200 3301 -12 1338 222 109 17 chr2 17419191 17419539 -233268315 + Charlie1b DNA MER1_type 1 406 -2355 2063 119 47 39 chr2 17419539 17419900 -233267954 + THE1B LTR MaLR 1 364 0 1338 222 109 17 chr2 17419900 17420029 -233267825 + Charlie1b DNA MER1_type 406 522 -1 21 0 0 0 chr2 17420093 17420114 -233267740 + AT_rich Low_complexity Low_complexity 1 21 0 1416 134 29 12 chr2 17420481 17420727 -233267127 + Tigger2a DNA MER2_type 2 251 -183 1121 138 53 0 chr2 17420793 17420981 -233266873 + Tigger2a DNA MER2_type 234 431 -3 430 186 153 8 chr2 17421550 17421674 -233266180 + MER104 DNA Tc2 1 142 -38 2233 112 0 16 chr2 17421933 17422247 -233265607 + AluSx SINE Alu 1 309 -3 1775 173 31 0 chr2 17422253 17422542 -233265312 + AluSx SINE Alu 1 298 -14 577 249 133 25 chr2 17422855 17423096 -233264758 + L2 LINE L2 3046 3312 -1 258 232 14 0 chr2 17424912 17424981 -233262873 + (TA)n Simple_repeat Simple_repeat 1 70 0 970 229 28 47 chr2 17425053 17425306 -233262548 - MIR SINE MIR -13 249 2 222 297 44 11 chr2 17425933 17426024 -233261830 + MIR3 SINE MIR 64 157 -51 421 344 44 27 chr2 17426029 17426212 -233261642 - MER5A DNA MER1_type -2 187 2 301 320 64 84 chr2 17426678 17426928 -233260926 - L2 LINE L2 -24 3248 3004 211 274 14 27 chr2 17427208 17427281 -233260573 + CT-rich Low_complexity Low_complexity 1 72 0 184 318 123 45 chr2 17427339 17427493 -233260361 - MIR3 SINE MIR -28 180 15 290 185 10 205 chr2 17427765 17427907 -233259947 + MIR SINE MIR 38 151 -100 267 194 14 83 chr2 17428805 17428877 -233258977 - MIR3 SINE MIR -26 182 116 2151 141 0 0 chr2 17428986 17429283 -233258571 + AluSx SINE Alu 1 297 -15 2253 118 0 3 chr2 17429285 17429598 -233258256 + AluSx SINE Alu 1 312 0 2049 127 11 0 chr2 17430093 17430429 -233257425 + AluSx SINE Alu 1 339 0 1877 163 46 3 chr2 17430803 17431152 -233256702 - MLT1A1 LTR MaLR -1 364 1 219 333 11 0 chr2 17432653 17432746 -233255108 + MIR SINE MIR 50 143 -119 1054 197 97 13 chr2 17433548 17433776 -233254078 - MIR SINE MIR 0 262 16 376 293 29 29 chr2 17433923 17434097 -233253757 + MIR SINE MIR 9 182 -80 488 249 227 18 chr2 17434463 17434793 -233253061 + MLT1L LTR MaLR 208 606 -9 200 298 25 50 chr2 17434849 17434970 -233252884 + MIR SINE MIR 74 191 -71 291 291 0 13 chr2 17435129 17435208 -233252646 + MIR3 SINE MIR 117 194 -14 243 137 78 39 chr2 17435297 17435348 -233252506 + L2 LINE L2 3160 3212 -60 201 147 0 0 chr2 17436613 17436647 -233251207 + (CATA)n Simple_repeat Simple_repeat 3 36 0 544 264 65 0 chr2 17436960 17437115 -233250739 - MLT1J LTR MaLR -342 169 5 313 373 121 20 chr2 17437841 17438147 -233249707 - L2 LINE L2 0 3272 2936 752 301 13 4 chr2 17438730 17438975 -233248879 - MIR SINE MIR 0 262 18 283 277 125 0 chr2 17438954 17439066 -233248788 + MIR SINE MIR 59 184 -78 * 1787 158 13 28 chr2 17439686 17440003 -233247851 - AluSx SINE Alu 0 312 1 216 255 20 0 chr2 17441267 17441318 -233246536 - L3 LINE CR1 -5 1572 1521 207 176 0 0 chr2 17441432 17441466 -233246388 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2239 99 0 10 chr2 17442999 17443302 -233244552 + AluSg SINE Alu 1 300 -10 1732 178 7 13 chr2 17443309 17443618 -233244236 + AluJb SINE Alu 1 307 -5 180 158 0 0 chr2 17443955 17443993 -233243861 + (TATAA)n Simple_repeat Simple_repeat 4 41 0 331 358 12 18 chr2 17444174 17444339 -233243515 - L2 LINE L2 -176 3096 2933 535 263 8 0 chr2 17444678 17444811 -233243043 - MER58B DNA MER1_type -2 339 206 186 336 44 44 chr2 17444947 17445060 -233242794 - L2 LINE L2 -3 3310 3198 238 191 0 0 chr2 17445669 17445711 -233242143 + L1M4b LINE L1 2 43 -6816 632 136 0 0 chr2 17445714 17445817 -233242037 + L1MB8 LINE L1 6075 6177 -1 278 219 0 0 chr2 17446456 17446520 -233241334 - MER116 DNA Mariner -15 65 2 1770 81 0 0 chr2 17447309 17447518 -233240336 - AluSc SINE Alu -15 294 86 22 0 0 0 chr2 17447530 17447552 -233240302 + AT_rich Low_complexity Low_complexity 1 22 0 465 318 194 53 chr2 17447633 17449436 -233238418 + L2 LINE L2 1220 3270 -2 28 29 0 0 chr2 17449714 17449749 -233238105 + AT_rich Low_complexity Low_complexity 1 35 0 2014 162 0 0 chr2 17451421 17451724 -233236130 + AluSx SINE Alu 7 309 -3 308 320 30 0 chr2 17452435 17452535 -233235319 + MIR3 SINE MIR 4 106 -102 2966 88 4 77 chr2 17452725 17453203 -233234651 + MLT2A1 LTR ERVL 2 444 0 1936 145 7 0 chr2 17453763 17454045 -233233809 + AluJb SINE Alu 1 284 -28 634 124 0 50 chr2 17454050 17454171 -233233683 + FLAM_C SINE Alu 28 142 -1 855 167 107 38 chr2 17454323 17454363 -233233491 - MER33 DNA MER1_type -2261 324 288 2042 142 0 3 chr2 17454363 17454659 -233233195 - AluSx SINE Alu -17 295 1 855 167 107 38 chr2 17454659 17454881 -233232973 - MER33 DNA MER1_type -2297 288 44 224 338 22 37 chr2 17455014 17455150 -233232704 + L3 LINE CR1 1329 1462 -115 562 190 69 9 chr2 17455429 17455545 -233232309 - MER3 DNA MER1_type -72 137 15 329 367 30 30 chr2 17455642 17455811 -233232043 + MIR3 SINE MIR 3 171 -37 2316 82 0 41 chr2 17456210 17456525 -233231329 - AluSq SINE Alu -11 302 1 2335 102 0 0 chr2 17458028 17458333 -233229521 + AluSx SINE Alu 1 305 -7 882 161 42 7 chr2 17459017 17459229 -233228625 + L1MD3 LINE L1 7577 7995 0 376 100 0 33 chr2 17460008 17460068 -233227786 - MER5B DNA MER1_type -120 58 1 2276 115 3 0 chr2 17460338 17460642 -233227212 - AluSx SINE Alu -7 305 1 1571 155 41 31 chr2 17462204 17462494 -233225360 + AluSx SINE Alu 1 293 -19 37 0 0 0 chr2 17462518 17462555 -233225299 + AT_rich Low_complexity Low_complexity 1 37 0 1481 163 21 4 chr2 17464321 17464560 -233223294 - AluJo SINE Alu -69 243 1 418 227 154 9 chr2 17464577 17464687 -233223167 + L2 LINE L2 3187 3312 -1 802 212 39 59 chr2 17464838 17464974 -233222880 + AluJo SINE Alu 1 133 -179 2091 156 0 0 chr2 17464974 17465275 -233222579 + AluSx SINE Alu 1 301 -11 802 212 39 59 chr2 17465275 17465341 -233222513 + AluJo SINE Alu 133 199 -113 2255 183 4 73 chr2 17465512 17466081 -233221773 - LTR27 LTR ERV1 -139 497 2 357 308 8 15 chr2 17466213 17466346 -233221508 + L1ME4a LINE L1 4491 4622 -1524 2364 101 0 7 chr2 17466581 17466889 -233220965 - AluSg SINE Alu -4 306 1 323 260 53 53 chr2 17467472 17467622 -233220232 + L1ME4a LINE L1 5764 5913 -208 207 0 0 0 chr2 17467687 17467710 -233220144 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1723 133 68 0 chr2 17467714 17467978 -233219876 - AluSx SINE Alu -30 282 1 252 256 174 0 chr2 17467979 17468065 -233219789 + L2 LINE L2 3212 3312 -1 2251 106 6 13 chr2 17468096 17468408 -233219446 - AluSg SINE Alu 0 310 1 1806 148 0 80 chr2 17468683 17468797 -233219057 + AluSx SINE Alu 3 125 -187 2589 103 59 0 chr2 17468797 17469137 -233218717 - THE1B LTR MaLR -4 360 1 1806 148 0 80 chr2 17469137 17469346 -233218508 + AluSx SINE Alu 125 300 -12 198 289 0 0 chr2 17469402 17469447 -233218407 - L2 LINE L2 -6 3307 3263 893 178 14 0 chr2 17470034 17470180 -233217674 + MER45A DNA AcHobo 31 178 0 237 211 0 0 chr2 17470755 17470807 -233217047 + (CA)n Simple_repeat Simple_repeat 2 53 0 448 259 154 19 chr2 17471354 17471516 -233216338 + MIR SINE MIR 23 206 -56 1129 185 48 81 chr2 17472297 17472632 -233215222 + MER33 DNA MER1_type 1 324 0 355 271 16 49 chr2 17472705 17472827 -233215027 - MIR3 SINE MIR -2 206 89 193 259 123 0 chr2 17473446 17473527 -233214327 + MER5A DNA MER1_type 16 106 -83 221 263 62 50 chr2 17473574 17473654 -233214200 + L2 LINE L2 3166 3246 -26 872 252 48 0 chr2 17473964 17474174 -233213680 + MIR SINE MIR 38 257 -5 327 306 69 7 chr2 17474219 17474363 -233213491 - MIR3 SINE MIR -6 202 50 2232 120 0 13 chr2 17475776 17476092 -233211762 + AluSx SINE Alu 1 312 0 238 317 0 73 chr2 17476093 17476216 -233211638 - MIR SINE MIR -135 127 14 1818 78 47 0 chr2 17476506 17476763 -233211091 - L1MA5 LINE L1 0 6300 6032 241 293 6 52 chr2 17477492 17477666 -233210188 + (CAGAGA)n Simple_repeat Simple_repeat 3 168 0 288 365 16 24 chr2 17477793 17477919 -233209935 - MIR3 SINE MIR 0 208 84 2455 77 0 0 chr2 17478119 17478417 -233209437 - AluY SINE Alu -13 298 1 503 275 23 15 chr2 17479334 17479465 -233208389 - L2 LINE L2 0 3272 3141 199 294 71 12 chr2 17480378 17480463 -233207391 + MIR SINE MIR 20 109 -153 315 218 92 11 chr2 17481919 17482006 -233205848 + L2 LINE L2 3179 3272 0 345 294 74 49 chr2 17482227 17482390 -233205464 + MIR SINE MIR 38 204 -58 180 200 0 0 chr2 17482391 17482431 -233205423 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 431 143 24 12 chr2 17483839 17483923 -233203931 + MLT1G1 LTR MaLR 511 595 0 275 337 117 17 chr2 17485879 17486289 -233201565 + L2 LINE L2 2841 3291 -22 305 330 85 5 chr2 17486323 17486511 -233201343 - MLT1K LTR MaLR -346 242 40 1820 218 185 2 chr2 17487004 17487523 -233200331 - MER90 LTR ERV1 0 614 1 579 280 35 43 chr2 17487576 17487922 -233199932 - L1MEc LINE L1 -5515 881 539 1078 287 33 24 chr2 17487987 17488409 -233199445 - L2 LINE L2 -1135 2179 1754 377 278 53 27 chr2 17488578 17488868 -233198986 - L1MEc LINE L1 -5986 410 100 1566 217 110 35 chr2 17489676 17490186 -233197668 - L1MB7 LINE L1 0 6184 5627 283 333 15 15 chr2 17490465 17490597 -233197257 + L2 LINE L2 2343 2474 -840 351 305 102 0 chr2 17490823 17490941 -233196913 - L2 LINE L2 -5 3308 3179 414 0 0 0 chr2 17491415 17491461 -233196393 + (CA)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr2 17492158 17492179 -233195675 + AT_rich Low_complexity Low_complexity 1 21 0 721 206 120 11 chr2 17492677 17492861 -233194993 + MER3 DNA MER1_type 1 204 -5 224 263 32 53 chr2 17493271 17493366 -233194488 - L2 LINE L2 0 3313 3221 729 217 46 57 chr2 17494080 17494582 -233193272 - MLT1G LTR MaLR -4 538 1 330 266 69 113 chr2 17494601 17494936 -233192918 - MLT1G-int LTR MaLR -24 1347 1028 300 363 14 7 chr2 17495508 17495654 -233192200 - MLT1G-int LTR MaLR -832 539 393 575 278 115 44 chr2 17495845 17496375 -233191479 - MLT1G LTR MaLR -4 551 1 1785 152 28 3 chr2 17496709 17496999 -233190855 - AluSx SINE Alu -15 297 1 1423 113 100 80 chr2 17497467 17497768 -233190086 + MER2 DNA MER2_type 25 331 -14 213 329 13 13 chr2 17497772 17497848 -233190006 - MIR SINE MIR -108 154 79 248 197 0 79 chr2 17497989 17498065 -233189789 - Charlie7 DNA MER1_type -2505 107 38 24 0 0 0 chr2 17499436 17499460 -233188394 + GC_rich Low_complexity Low_complexity 1 24 0 321 345 111 34 chr2 17500549 17500784 -233187070 + L2 LINE L2 3010 3262 -10 21 36 0 0 chr2 17500826 17500854 -233187000 + AT_rich Low_complexity Low_complexity 1 28 0 255 308 33 22 chr2 17501464 17501555 -233186299 - MIR SINE MIR -148 114 23 803 129 14 43 chr2 17501908 17502048 -233185806 - AluSq/x SINE Alu -177 136 1 421 270 80 21 chr2 17503374 17503583 -233184271 - L1ME LINE L1 -346 5816 5591 1068 148 0 0 chr2 17504030 17504192 -233183662 + AluSg/x SINE Alu 137 298 -14 281 266 138 0 chr2 17505570 17505664 -233182190 + L2 LINE L2 2212 2318 -996 632 340 98 3 chr2 17505665 17505962 -233181892 + L2 LINE L2 2429 2753 -561 2285 97 0 7 chr2 17505962 17506260 -233181594 + AluSg SINE Alu 1 296 -14 1962 137 14 3 chr2 17506271 17506564 -233181290 + AluJb SINE Alu 1 296 -16 298 328 79 23 chr2 17507040 17507217 -233180637 + MIR SINE MIR 32 218 -44 23 78 0 0 chr2 17507390 17507441 -233180413 + AT_rich Low_complexity Low_complexity 1 51 0 2373 75 0 25 chr2 17507510 17507829 -233180025 - AluY SINE Alu 0 311 1 367 303 133 40 chr2 17507847 17508170 -233179684 - L1ME4a LINE L1 -178 5943 5591 268 258 142 19 chr2 17508283 17508438 -233179416 - L1ME4a LINE L1 -2381 5427 5254 495 183 186 71 chr2 17509791 17510086 -233177768 - L1MC5 LINE L1 -30 7931 7603 257 280 90 20 chr2 17510437 17510537 -233177317 + MIR SINE MIR 156 262 0 420 286 26 7 chr2 17510672 17510826 -233177028 + L1ME LINE L1 5616 5772 -349 22 0 0 0 chr2 17511267 17511289 -233176565 + AT_rich Low_complexity Low_complexity 1 22 0 2139 130 0 7 chr2 17511493 17511792 -233176062 - AluSx SINE Alu -15 297 1 240 283 113 19 chr2 17513881 17514040 -233173814 - L1MC/D LINE L1 -1903 5905 5732 23 33 0 0 chr2 17514271 17514301 -233173553 + AT_rich Low_complexity Low_complexity 1 30 0 1026 183 0 0 chr2 17514342 17514506 -233173348 - AluJ SINE Alu -12 300 137 29 60 0 0 chr2 17514517 17514567 -233173287 + AT_rich Low_complexity Low_complexity 1 50 0 945 128 23 0 chr2 17514567 17514700 -233173154 - AluJ SINE Alu -176 136 1 22 0 0 0 chr2 17515117 17515139 -233172715 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 17515556 17515597 -233172257 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 17516072 17516094 -233171760 + AT_rich Low_complexity Low_complexity 1 22 0 219 69 0 0 chr2 17516220 17516249 -233171605 + (TA)n Simple_repeat Simple_repeat 1 29 0 227 121 0 0 chr2 17516769 17516802 -233171052 + L2 LINE L2 3231 3263 -9 27 49 0 0 chr2 17517230 17517271 -233170583 + AT_rich Low_complexity Low_complexity 1 41 0 192 250 77 0 chr2 17517803 17517855 -233169999 - L2 LINE L2 -4 3309 3254 227 278 165 30 chr2 17518237 17518370 -233169484 + L3 LINE CR1 1396 1546 -31 315 299 193 25 chr2 17518948 17519145 -233168709 + MIR SINE MIR 20 249 -13 431 277 186 0 chr2 17519218 17519438 -233168416 - MIR SINE MIR 0 262 2 22 0 0 0 chr2 17519570 17519592 -233168262 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 17520346 17520374 -233167480 + AT_rich Low_complexity Low_complexity 1 28 0 1977 226 153 38 chr2 17520905 17521180 -233166674 + L1MC4 LINE L1 7200 7442 -600 1605 156 85 14 chr2 17521180 17521463 -233166391 + AluSx SINE Alu 5 307 -5 1977 226 153 38 chr2 17521463 17521951 -233165903 + L1MC4 LINE L1 7442 8040 -2 254 289 153 11 chr2 17521965 17522155 -233165699 + HAL1 LINE L1 1475 1691 -816 1621 168 32 7 chr2 17522167 17522452 -233165402 + AluSx SINE Alu 1 292 -20 25 65 0 0 chr2 17522598 17522644 -233165210 + AT_rich Low_complexity Low_complexity 1 46 0 338 272 98 28 chr2 17522768 17523167 -233164687 + L1M4 LINE L1 2271 2703 -3679 271 286 0 10 chr2 17523439 17523537 -233164317 - L1MC4 LINE L1 -1332 6710 6614 227 239 22 43 chr2 17523463 17523555 -233164299 + L1MC4 LINE L1 6614 6703 -1339 * 228 292 0 62 chr2 17523561 17523657 -233164197 + L1MC4 LINE L1 6614 6703 -1339 254 239 22 43 chr2 17523677 17523769 -233164085 + L1MC4 LINE L1 6614 6703 -1339 21 0 0 0 chr2 17523973 17523994 -233163860 + AT_rich Low_complexity Low_complexity 1 21 0 2093 116 3 7 chr2 17524252 17524544 -233163310 - AluSx SINE Alu -21 291 1 2143 92 6 64 chr2 17524927 17525241 -233162613 - AluSq SINE Alu -17 296 1 586 223 63 57 chr2 17528217 17528371 -233159483 + L1M4 LINE L1 4401 4558 -1824 1876 162 10 7 chr2 17528371 17528680 -233159174 - AluSx SINE Alu -2 310 1 586 223 63 57 chr2 17528680 17528700 -233159154 + L1M4 LINE L1 4558 4576 -1806 3441 182 75 15 chr2 17528702 17529917 -233157937 + L1M4 LINE L1 4731 6016 -404 2294 155 3 0 chr2 17530207 17530543 -233157311 + MER1B DNA MER1_type 1 337 0 1863 114 29 39 chr2 17530934 17531242 -233156612 + AluSx SINE Alu 1 305 -7 271 159 0 0 chr2 17531419 17531463 -233156391 - L2 LINE L2 -36 3236 3193 350 253 36 0 chr2 17531864 17531947 -233155907 - MIR SINE MIR -86 122 37 212 235 59 0 chr2 17531975 17532026 -233155828 + L2 LINE L2 2994 3047 -266 370 253 111 0 chr2 17532066 17532165 -233155689 + L2 LINE L2 3166 3275 -38 222 224 20 0 chr2 17532551 17532600 -233155254 - L2 LINE L2 0 3272 3223 405 333 106 40 chr2 17532718 17532972 -233154882 + L2 LINE L2 2979 3254 -18 2062 116 31 0 chr2 17532972 17533264 -233154590 + AluSq SINE Alu 1 301 -12 405 333 106 40 chr2 17533264 17533282 -233154572 + L2 LINE L2 3254 3269 -3 507 248 113 50 chr2 17534781 17534855 -233152999 - MIR SINE MIR -11 251 183 2313 101 0 0 chr2 17534855 17535152 -233152702 + AluSx SINE Alu 1 297 -15 507 248 113 50 chr2 17535152 17535309 -233152545 - MIR SINE MIR -79 183 6 2346 63 0 3 chr2 17535544 17535869 -233151985 + AluSp SINE Alu 1 324 0 650 294 147 27 chr2 17536219 17536872 -233150982 + L2 LINE L2 2580 3313 0 366 331 56 17 chr2 17538460 17538638 -233149216 - MIR SINE MIR -76 186 2 296 278 173 8 chr2 17539152 17539285 -233148569 - MIR SINE MIR -66 196 42 236 233 82 0 chr2 17540650 17540723 -233147131 + L2 LINE L2 3180 3258 -55 290 253 32 21 chr2 17540957 17541052 -233146802 - MER5A DNA MER1_type -5 184 89 219 114 0 0 chr2 17541314 17541349 -233146505 + (T)n Simple_repeat Simple_repeat 1 35 0 197 360 81 0 chr2 17541950 17542036 -233145818 + L2 LINE L2 2978 3070 -202 5192 31 2 25 chr2 17542128 17542733 -233145121 + L1PA5 LINE L1 5562 6152 -2 721 141 82 12 chr2 17542733 17542903 -233144951 - MER33 DNA MER1_type -19 344 163 610 220 35 14 chr2 17542962 17543103 -233144751 - MER33 DNA MER1_type -180 144 1 2225 116 0 3 chr2 17543275 17543577 -233144277 + AluSx SINE Alu 3 303 -9 353 273 10 0 chr2 17544442 17544541 -233143313 + MIR SINE MIR 76 175 -87 231 114 0 0 chr2 17545203 17545238 -233142616 + (GGGGA)n Simple_repeat Simple_repeat 2 36 0 268 282 34 60 chr2 17545836 17545953 -233141901 + MIR SINE MIR 67 180 -82 4486 117 19 56 chr2 17546610 17547327 -233140527 + LTR8 LTR ERV1 1 691 0 225 185 15 185 chr2 17547331 17547391 -233140463 + MER5A DNA MER1_type 76 104 -85 2223 99 0 0 chr2 17547391 17547683 -233140171 - AluSg1 SINE Alu -16 293 2 225 185 15 185 chr2 17547683 17547752 -233140102 + MER5A DNA MER1_type 104 183 -6 209 267 0 0 chr2 17548091 17548136 -233139718 + CT-rich Low_complexity Low_complexity 3 47 0 537 327 52 14 chr2 17548328 17548539 -233139315 - MIR SINE MIR -9 253 35 609 297 104 18 chr2 17548715 17549221 -233138633 - L1ME4a LINE L1 -278 5843 5269 2100 128 3 3 chr2 17550906 17551210 -233136644 - AluSx SINE Alu -8 304 1 419 250 62 44 chr2 17551528 17551688 -233136166 + MIR SINE MIR 79 241 -21 370 274 16 48 chr2 17552018 17552142 -233135712 + MIR SINE MIR 29 148 -114 1887 153 0 52 chr2 17552145 17552472 -233135382 + AluJb SINE Alu 1 310 -2 195 139 0 0 chr2 17552705 17552741 -233135113 + (CA)n Simple_repeat Simple_repeat 2 37 0 713 215 130 35 chr2 17553054 17553254 -233134600 + MIR SINE MIR 12 230 -32 1768 184 81 35 chr2 17553279 17553675 -233134179 + MLT2B1 LTR ERVL 2 415 -105 408 40 0 0 chr2 17553678 17553728 -233134126 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 1717 138 4 54 chr2 17554142 17554440 -233133414 + AluJb SINE Alu 22 305 0 240 167 0 0 chr2 17554674 17554710 -233133144 - MER91 DNA MER1_type 0 140 105 262 333 67 0 chr2 17554754 17554874 -233132980 + L2 LINE L2 3166 3293 -20 197 304 0 0 chr2 17555094 17555150 -233132704 - L2 LINE L2 -208 3064 3009 238 352 89 33 chr2 17555252 17555465 -233132389 + MIR SINE MIR 28 252 -10 21 0 0 0 chr2 17555881 17555902 -233131952 + AT_rich Low_complexity Low_complexity 1 21 0 262 317 49 0 chr2 17555928 17556010 -233131844 - MIR SINE MIR -62 146 61 802 226 6 11 chr2 17556111 17556288 -233131566 - MER97a DNA MER1_type? -717 177 2 2309 100 3 0 chr2 17556457 17556756 -233131098 - AluSc SINE Alu -9 300 1 304 319 64 38 chr2 17556835 17556992 -233130862 - MIR SINE MIR -90 172 12 248 218 323 0 chr2 17557083 17557213 -233130641 + MER91 DNA MER1_type 1 186 -4 304 253 11 42 chr2 17557805 17557900 -233129954 + MIR SINE MIR 19 110 -98 1799 159 54 0 chr2 17558101 17558397 -233129457 + AluSx SINE Alu 1 312 0 234 338 0 0 chr2 17559304 17559384 -233128470 + MIR SINE MIR 63 142 -120 6020 102 6 15 chr2 17559440 17560328 -233127526 + L1PB3 LINE L1 5275 6154 0 235 340 40 10 chr2 17561251 17561351 -233126503 - MIR SINE MIR -81 181 79 289 226 179 12 chr2 17563880 17563964 -233123890 - MIR SINE MIR -83 179 82 492 302 99 36 chr2 17564002 17564508 -233123346 - L1ME LINE L1 -322 5799 5262 2111 97 28 53 chr2 17564549 17564909 -233122945 - L1MA4A LINE L1 0 6303 5953 1220 126 69 0 chr2 17564917 17565092 -233122762 - AluJo SINE Alu -39 273 87 830 80 0 9 chr2 17565092 17565204 -233122650 - L1MA4A LINE L1 -330 5973 5863 876 170 14 0 chr2 17565583 17565724 -233122130 - BC200 scRNA scRNA -56 144 2 1661 183 18 0 chr2 17565993 17566277 -233121577 - AluJb SINE Alu -23 289 1 246 304 174 0 chr2 17567404 17567519 -233120335 + L2 LINE L2 3179 3313 0 2091 142 3 0 chr2 17568100 17568409 -233119445 + AluSx SINE Alu 1 310 -2 2244 93 6 16 chr2 17568622 17568934 -233118920 - AluY SINE Alu -2 309 1 279 54 0 0 chr2 17569557 17569594 -233118260 + (TA)n Simple_repeat Simple_repeat 2 38 0 243 0 0 0 chr2 17569594 17569621 -233118233 + (TG)n Simple_repeat Simple_repeat 1 27 0 1857 161 4 0 chr2 17569621 17569901 -233117953 - AluSx SINE Alu -31 281 1 1539 202 17 0 chr2 17570483 17570770 -233117084 + AluJo SINE Alu 1 292 -20 226 348 11 0 chr2 17571430 17571519 -233116335 + (TG)n Simple_repeat Simple_repeat 2 91 0 314 129 0 16 chr2 17571903 17571965 -233115889 - L1MA4A LINE L1 -295 6008 5948 241 242 0 16 chr2 17572221 17572283 -233115571 - MIR SINE MIR -51 211 151 4657 26 0 0 chr2 17573786 17574315 -233113539 + L1PA5 LINE L1 5626 6154 0 324 0 0 0 chr2 17574315 17574351 -233113503 + (TA)n Simple_repeat Simple_repeat 2 37 0 22 0 0 0 chr2 17575012 17575034 -233112820 + AT_rich Low_complexity Low_complexity 1 22 0 1747 216 43 54 chr2 17575444 17575906 -233111948 - MLT2C2 LTR ERVL -7 457 1 262 140 0 0 chr2 17576042 17576092 -233111762 + Alu SINE Alu 251 300 0 718 122 8 8 chr2 17576714 17576845 -233111009 + (TCCA)n Simple_repeat Simple_repeat 1 131 0 23 0 0 0 chr2 17577123 17577146 -233110708 + AT_rich Low_complexity Low_complexity 1 23 0 6122 125 10 28 chr2 17577166 17577531 -233110323 - L1PB1 LINE L1 0 6867 6497 471 60 0 0 chr2 17577531 17577598 -233110256 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 6122 125 10 28 chr2 17577598 17578514 -233109340 - L1PB1 LINE L1 -370 6497 5614 652 38 0 0 chr2 17578514 17578594 -233109260 + L1PA5 LINE L1 5990 6069 -85 1022 150 22 33 chr2 17578811 17578838 -233109016 - AluJ SINE Alu -12 300 274 2661 104 0 29 chr2 17578838 17579170 -233108684 + THE1B LTR MaLR 1 322 -42 2468 73 0 3 chr2 17579170 17579471 -233108383 - AluY SINE Alu -11 300 1 2661 104 0 29 chr2 17579471 17579513 -233108341 + THE1B LTR MaLR 322 364 0 1022 150 22 33 chr2 17579513 17579665 -233108189 - AluJ SINE Alu -38 274 123 225 0 0 0 chr2 17580049 17580074 -233107780 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2097 132 0 0 chr2 17580325 17580606 -233107248 - AluJb SINE Alu -31 281 1 781 122 17 0 chr2 17580616 17580731 -233107123 - AluJ SINE Alu -182 130 14 1939 145 20 7 chr2 17581673 17581970 -233105884 - AluSx SINE Alu -8 304 4 1281 170 134 48 chr2 17582180 17582516 -233105338 - MLT1A1 LTR MaLR 0 365 1 1742 174 0 17 chr2 17582793 17583091 -233104763 - AluJo SINE Alu -18 294 2 1532 230 8 37 chr2 17583362 17583736 -233104118 + MLT1A1 LTR MaLR 3 365 0 2367 87 67 17 chr2 17583891 17584248 -233103606 - THE1C LTR MaLR 0 375 1 300 241 65 9 chr2 17584847 17584955 -233102899 - MIR SINE MIR -80 182 69 187 269 45 0 chr2 17586315 17586382 -233101472 + MIR SINE MIR 122 191 -71 923 274 150 32 chr2 17587073 17587726 -233100128 + L1MEd LINE L1 496 1225 -4894 396 0 0 0 chr2 17587994 17588038 -233099816 + (TA)n Simple_repeat Simple_repeat 1 44 0 13503 184 81 6 chr2 17588040 17590828 -233097026 - L1PB1 LINE L1 -1241 5621 3043 183 42 0 0 chr2 17590828 17590852 -233097002 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 13503 184 81 6 chr2 17590852 17593290 -233094564 - L1PB1 LINE L1 -3819 3043 6 234 0 0 0 chr2 17593305 17593331 -233094523 + (T)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 17594364 17594388 -233093466 + AT_rich Low_complexity Low_complexity 1 24 0 286 354 51 15 chr2 17595095 17595397 -233092457 - L2 LINE L2 -222 3050 2702 1743 160 16 35 chr2 17595399 17595717 -233092137 - AluJo SINE Alu 0 312 1 684 304 44 15 chr2 17596152 17596425 -233091429 - MLT1J LTR MaLR -148 363 83 483 292 0 0 chr2 17596432 17596545 -233091309 + MER81 DNA DNA 2 114 0 2205 119 3 0 chr2 17596855 17597149 -233090705 - AluSx SINE Alu -17 295 1 299 323 91 70 chr2 17597153 17597438 -233090416 - L2 LINE L2 -5 3267 2977 211 244 268 16 chr2 17597934 17598061 -233089793 - MIR3 SINE MIR -5 203 45 2017 164 0 0 chr2 17598094 17598406 -233089448 - AluJb SINE Alu 0 312 1 21 0 0 0 chr2 17601667 17601688 -233086166 + GC_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 17601751 17601793 -233086061 + GC_rich Low_complexity Low_complexity 1 42 0 231 88 0 0 chr2 17601844 17601878 -233085976 + (CCCCG)n Simple_repeat Simple_repeat 5 38 0 28 29 0 0 chr2 17601954 17601989 -233085865 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 17603966 17603987 -233083867 + AT_rich Low_complexity Low_complexity 1 21 0 371 270 0 10 chr2 17604254 17604354 -233083500 - MIR SINE MIR -2 260 162 706 231 65 19 chr2 17604736 17604952 -233082902 - MIR SINE MIR -8 254 29 1498 106 0 0 chr2 17606691 17606890 -233080964 + AluSc SINE Alu 86 284 -25 195 42 0 0 chr2 17606895 17606919 -233080935 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 318 252 9 26 chr2 17606924 17607039 -233080815 - MIR SINE MIR -1 261 149 22 0 0 0 chr2 17607040 17607062 -233080792 + AT_rich Low_complexity Low_complexity 1 22 0 560 222 144 0 chr2 17607200 17607380 -233080474 + MIR SINE MIR 47 252 -10 217 280 80 0 chr2 17607842 17607917 -233079937 - L2 LINE L2 -53 3219 3139 2258 104 0 17 chr2 17608153 17608450 -233079404 - AluSx SINE Alu -20 292 1 825 241 35 18 chr2 17608538 17608766 -233079088 - MIR SINE MIR -1 261 30 240 295 265 0 chr2 17609073 17609273 -233078581 - L2 LINE L2 -829 2485 2233 538 273 92 55 chr2 17609355 17609681 -233078173 + MER102b DNA MER1_type 2 339 -2 369 0 0 0 chr2 17609995 17610036 -233077818 + (TG)n Simple_repeat Simple_repeat 2 42 0 516 247 5 76 chr2 17610854 17611077 -233076777 - L2 LINE L2 0 3313 3107 180 0 0 0 chr2 17611108 17611128 -233076726 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 43416 55 1 0 chr2 17611128 17617257 -233070597 - L1PA5 LINE L1 -11 6143 11 696 254 93 18 chr2 17617282 17617637 -233070217 - L2 LINE L2 -243 3070 2684 1568 365 22 20 chr2 17617638 17618128 -233069726 - Charlie4a DNA MER1_type -1 507 17 227 246 193 29 chr2 17619192 17619363 -233068491 - L1ME4a LINE L1 -21 6100 5902 550 323 35 13 chr2 17619424 17619656 -233068198 + MIR SINE MIR 2 238 -24 714 274 103 4 chr2 17619665 17619924 -233067930 - L1MB8 LINE L1 -297 5824 5558 24 0 0 0 chr2 17620795 17620819 -233067035 + AT_rich Low_complexity Low_complexity 1 24 0 1049 200 9 36 chr2 17621422 17621647 -233066207 + MER20 DNA MER1_type 1 219 0 399 291 133 14 chr2 17623193 17623403 -233064451 + MIR SINE MIR 28 262 0 287 122 27 27 chr2 17623996 17624070 -233063784 + GA-rich Low_complexity Low_complexity 3 76 0 270 267 128 0 chr2 17624379 17624465 -233063389 + L2 LINE L2 3168 3264 -8 428 330 59 14 chr2 17625910 17626131 -233061723 + Charlie8 DNA MER1_type 4 234 -2183 699 309 85 65 chr2 17627608 17628442 -233059412 + L1MEd LINE L1 13 863 -5256 1811 169 0 29 chr2 17629469 17629777 -233058077 + AluJo SINE Alu 1 299 -13 274 275 22 22 chr2 17630305 17630396 -233057458 + MLT1K LTR MaLR 190 280 -308 370 270 157 0 chr2 17631978 17632156 -233055698 + MIR SINE MIR 57 262 0 2490 138 16 47 chr2 17633666 17633707 -233054147 + MER57B LTR ERV1 1 42 -392 2204 110 0 0 chr2 17633707 17633998 -233053856 - AluSg SINE Alu -17 293 3 2490 138 16 47 chr2 17633998 17634404 -233053450 + MER57B LTR ERV1 42 434 0 210 295 26 0 chr2 17634674 17634752 -233053102 - MIR SINE MIR -170 92 13 194 308 48 48 chr2 17634780 17634884 -233052970 + L2 LINE L2 3169 3272 0 325 268 79 37 chr2 17634892 17635056 -233052798 - MIR SINE MIR -27 235 65 182 91 30 0 chr2 17635818 17635851 -233052003 + GA-rich Low_complexity Low_complexity 2 35 0 233 167 0 67 chr2 17635861 17635921 -233051933 + (CAGAGA)n Simple_repeat Simple_repeat 6 61 0 670 187 71 33 chr2 17636314 17636496 -233051358 - MER53 DNA DNA 0 189 1 186 133 0 0 chr2 17636541 17636571 -233051283 + (TA)n Simple_repeat Simple_repeat 2 31 0 285 29 0 0 chr2 17636962 17636996 -233050858 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 293 317 33 17 chr2 17637767 17637887 -233049967 + MIR SINE MIR 21 142 -66 2162 124 0 7 chr2 17637893 17638199 -233049655 - AluJo SINE Alu -8 304 1 326 183 28 0 chr2 17638555 17638626 -233049228 + L1ME4a LINE L1 5974 6046 -75 5677 145 21 7 chr2 17640900 17641998 -233045856 - L1PA16 LINE L1 -3 6163 5051 1964 176 29 11 chr2 17642098 17642478 -233045376 - L1PA16 LINE L1 -37 6129 5743 800 255 19 14 chr2 17642605 17642821 -233045033 - MER58B DNA MER1_type -3 338 122 3349 103 10 12 chr2 17642826 17642874 -233044980 - L1PB2 LINE L1 -2 6149 6102 2602 91 10 58 chr2 17642874 17643268 -233044586 + THE1C LTR MaLR 1 375 0 3349 103 10 12 chr2 17643268 17643706 -233044148 - L1PB2 LINE L1 -49 6102 5664 237 274 0 0 chr2 17644348 17644399 -233043455 + polypyrimidine Low_complexity Low_complexity 3 53 0 655 215 11 11 chr2 17644399 17644576 -233043278 + CT-rich Low_complexity Low_complexity 2 178 0 198 0 0 0 chr2 17644578 17644600 -233043254 + (TTTTC)n Simple_repeat Simple_repeat 4 25 0 1752 178 4 0 chr2 17644600 17644875 -233042979 - AluJo SINE Alu -35 277 2 933 226 43 0 chr2 17645186 17645372 -233042482 + MER63A DNA MER1_type 1 194 -16 2270 124 32 5 chr2 17645524 17645904 -233041950 - L1PA16 LINE L1 -9 6157 5768 1637 151 191 38 chr2 17645968 17646360 -233041494 + LTR47A LTR ERVL 1 452 0 415 90 0 45 chr2 17646597 17646664 -233041190 + MLT1A1 LTR MaLR 2 65 -300 2283 112 0 3 chr2 17646687 17646992 -233040862 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr2 17648266 17648286 -233039568 + (ATG)n Simple_repeat Simple_repeat 3 22 0 804 145 0 0 chr2 17648700 17648845 -233039009 + (TGGA)n Simple_repeat Simple_repeat 3 147 0 306 245 10 59 chr2 17650040 17650142 -233037712 + L1MEd LINE L1 485 581 -5538 183 186 47 0 chr2 17650440 17650483 -233037371 + L2 LINE L2 3143 3187 -85 1336 191 135 28 chr2 17652202 17652527 -233035327 - MLT1A1 LTR MaLR 0 365 6 2683 39 0 0 chr2 17652549 17652854 -233035000 - AluY SINE Alu -6 305 1 2360 110 0 0 chr2 17653026 17653335 -233034519 - AluSg SINE Alu -1 309 1 212 302 31 10 chr2 17653690 17653786 -233034068 + L2 LINE L2 3192 3289 -24 972 276 56 43 chr2 17654724 17655170 -233032684 - MLT1J LTR MaLR -59 452 1 233 243 19 87 chr2 17655257 17655360 -233032494 + L2 LINE L2 3146 3241 -31 197 327 127 0 chr2 17655358 17655468 -233032386 - MIR3 SINE MIR -52 156 33 * 1405 256 18 36 chr2 17655961 17656411 -233031443 - LTR53 LTR ERVL 0 519 78 244 154 205 26 chr2 17656474 17656552 -233031302 - MIR SINE MIR -108 154 63 289 310 32 10 chr2 17656598 17656717 -233031137 - MIR SINE MIR -64 144 16 2119 113 3 10 chr2 17657557 17657858 -233029996 + AluSx SINE Alu 1 299 -13 198 71 0 0 chr2 17657912 17657940 -233029914 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 633 209 0 22 chr2 17658887 17659069 -233028785 + CT-rich Low_complexity Low_complexity 1 178 0 190 287 103 35 chr2 17660250 17660337 -233027517 - MIR SINE MIR -97 111 19 196 296 148 9 chr2 17661751 17661859 -233025995 + MIR SINE MIR 66 188 -74 265 268 24 12 chr2 17661866 17661948 -233025906 - L2 LINE L2 0 3272 3190 917 224 108 76 chr2 17662018 17662319 -233025535 - L1MC5 LINE L1 -35 7926 7636 1829 156 167 16 chr2 17662319 17662691 -233025163 - MSTA LTR MaLR 0 428 1 917 224 108 76 chr2 17662691 17663164 -233024690 - L1MC5 LINE L1 -325 7636 7127 26 0 0 0 chr2 17663178 17663204 -233024650 + AT_rich Low_complexity Low_complexity 1 26 0 644 143 0 0 chr2 17663210 17663301 -233024553 - FLAM_C SINE Alu -25 118 28 4759 232 78 28 chr2 17663309 17665902 -233021952 - L1MB8 LINE L1 0 6178 3406 2073 114 14 68 chr2 17665902 17666253 -233021601 + MER4B LTR ERV1 1 332 -278 2198 126 56 8 chr2 17666259 17666617 -233021237 - THE1C LTR MaLR 0 375 1 9124 118 7 50 chr2 17666617 17668255 -233019599 - THE1C-int LTR MaLR 0 1580 8 1979 155 62 6 chr2 17668263 17668617 -233019237 - THE1C LTR MaLR -1 374 1 1751 140 13 35 chr2 17668617 17668925 -233018929 + MER4E LTR ERV1 431 779 0 590 236 56 38 chr2 17668927 17669071 -233018783 - L1MB8 LINE L1 -2739 3407 3267 1724 156 0 18 chr2 17669071 17669354 -233018500 - AluSx SINE Alu -2 310 33 590 236 56 38 chr2 17669354 17669497 -233018357 - L1MB8 LINE L1 -2879 3267 3115 2359 123 103 5 chr2 17670029 17670419 -233017435 - MSTA LTR MaLR 0 428 1 252 301 36 24 chr2 17670593 17670676 -233017178 + MIR SINE MIR 12 95 -167 185 224 17 0 chr2 17674864 17674922 -233012932 + (TAA)n Simple_repeat Simple_repeat 1 59 0 461 239 91 35 chr2 17674933 17675120 -233012734 - MIR SINE MIR -63 145 3 209 139 0 0 chr2 17676260 17676296 -233011558 - L2 LINE L2 -221 3051 3016 280 253 0 13 chr2 17676824 17676899 -233010955 + MER116 DNA Mariner 6 79 -1 2557 136 64 5 chr2 17677709 17678113 -233009741 + MSTA LTR MaLR 1 428 0 325 222 0 48 chr2 17678163 17678330 -233009524 + CT-rich Low_complexity Low_complexity 1 159 0 850 233 45 29 chr2 17678331 17678640 -233009214 - L1MC5 LINE L1 -30 7931 7618 250 365 36 16 chr2 17678832 17679024 -233008830 - L3b LINE CR1 -211 1372 1177 1827 216 92 15 chr2 17679142 17679610 -233008244 - MLT1D LTR MaLR -1 504 1 638 281 106 0 chr2 17679685 17679902 -233007952 + MIR SINE MIR 11 250 -12 225 296 14 92 chr2 17680260 17680286 -233007568 + MIR SINE MIR 22 48 -214 2131 119 3 3 chr2 17680286 17680571 -233007283 - AluSx SINE Alu -27 285 1 225 296 14 92 chr2 17680571 17680686 -233007168 + MIR SINE MIR 48 152 -110 191 307 51 88 chr2 17682353 17682490 -233005364 - L2 LINE L2 -1 3271 3140 515 255 54 13 chr2 17682523 17682672 -233005182 + MIR SINE MIR 20 174 -88 630 202 22 165 chr2 17683390 17683662 -233004192 - MIR SINE MIR -26 236 4 620 239 48 32 chr2 17683968 17684156 -233003698 - LTR40b LTR ERVL 0 462 272 2113 146 0 3 chr2 17684248 17684557 -233003297 + AluSx SINE Alu 1 308 -4 219 36 0 0 chr2 17684809 17684837 -233003017 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 289 318 68 7 chr2 17685670 17685818 -233002036 - MIR SINE MIR -78 184 28 309 247 0 26 chr2 17686296 17686373 -233001481 - L2 LINE L2 -2 3270 3196 722 289 74 25 chr2 17786577 17786930 -232900924 + MLT1K LTR MaLR 217 586 -2 438 159 307 0 chr2 17787172 17787260 -232900594 - FLAM_C SINE Alu -17 126 12 432 143 0 0 chr2 17787336 17787420 -232900434 + (TG)n Simple_repeat Simple_repeat 1 84 0 216 319 0 44 chr2 17787426 17787517 -232900337 + MIR SINE MIR 156 242 -20 189 0 0 0 chr2 17787693 17787714 -232900140 + (TA)n Simple_repeat Simple_repeat 1 21 0 3593 130 19 4 chr2 17787991 17788514 -232899340 + THE1B-int LTR MaLR 1044 1574 -6 2187 137 76 15 chr2 17788519 17788862 -232898992 + THE1B LTR MaLR 1 364 0 200 280 0 0 chr2 17790101 17790151 -232897703 + GA-rich Low_complexity Low_complexity 3 52 0 189 270 0 0 chr2 17790245 17790334 -232897520 + GA-rich Low_complexity Low_complexity 3 91 0 2322 250 53 5 chr2 17790515 17791154 -232896700 - MST-int LTR MaLR -955 696 27 355 287 37 7 chr2 17791151 17791287 -232896567 + THE1-int LTR MaLR 466 605 -975 * 595 253 50 11 chr2 17791291 17791473 -232896381 - MSTA LTR MaLR -162 266 78 568 241 195 29 chr2 17791480 17791721 -232896133 + MST-int LTR MaLR 976 1256 -395 235 111 56 56 chr2 17791709 17791763 -232896091 - MST-int LTR MaLR -616 1035 982 * 305 184 87 78 chr2 17791842 17791945 -232895909 - MSTA LTR MaLR -324 104 1 1319 210 30 42 chr2 17791945 17792278 -232895576 - MSTA-int LTR MaLR 0 1651 1323 315 267 109 0 chr2 17792283 17792384 -232895470 - MSTA LTR MaLR -257 171 60 430 237 21 0 chr2 17792433 17792530 -232895324 - MSTA LTR MaLR -329 99 1 3862 226 70 38 chr2 17792530 17793621 -232894233 - MSTA-int LTR MaLR 0 1651 526 720 127 97 0 chr2 17793724 17793742 -232894112 - L1P LINE L1 -3673 2473 2458 324 0 0 0 chr2 17793742 17793778 -232894076 + (TA)n Simple_repeat Simple_repeat 1 36 0 720 127 97 0 chr2 17793778 17793893 -232893961 - L1P LINE L1 -3688 2458 2327 7131 66 6 7 chr2 17793893 17795295 -232892559 + L1PA7 LINE L1 4743 6150 -4 405 345 31 27 chr2 17795981 17796204 -232891650 - MLT1K LTR MaLR -363 225 2 348 294 161 0 chr2 17796405 17796548 -232891306 + MIR SINE MIR 24 191 -17 408 167 59 78 chr2 17796688 17796790 -232891064 - MLT1D LTR MaLR -151 354 255 2277 148 40 36 chr2 17796836 17797385 -232890469 + MLT2A2 LTR ERVL 1 554 0 1007 180 26 11 chr2 17797406 17797595 -232890259 - MLT1D LTR MaLR -313 192 1 183 358 49 0 chr2 17797916 17797997 -232889857 + MIR3 SINE MIR 105 189 -19 223 255 0 0 chr2 17798168 17798219 -232889635 + CT-rich Low_complexity Low_complexity 1 51 0 1235 131 75 5 chr2 17798592 17798806 -232889048 + L1PB4 LINE L1 5670 5898 -258 243 291 25 13 chr2 17798840 17798919 -232888935 - MIR SINE MIR -112 150 71 306 290 97 51 chr2 17798944 17799120 -232888734 + MIR3 SINE MIR 23 206 -2 214 250 0 0 chr2 17799498 17799542 -232888312 + (CA)n Simple_repeat Simple_repeat 1 44 0 1393 193 163 12 chr2 17799907 17800238 -232887616 - MLT1C LTR MaLR 0 467 87 1461 119 9 5 chr2 17800238 17800448 -232887406 + MSTA LTR MaLR 1 211 -217 1192 187 62 53 chr2 17800860 17801181 -232886673 + MER33 DNA MER1_type 1 324 0 186 241 66 102 chr2 17801584 17801721 -232886133 + L2 LINE L2 2956 3087 -185 565 301 102 0 chr2 17802194 17802305 -232885549 + L1ME4a LINE L1 5522 5620 -501 2420 43 7 4 chr2 17802305 17802586 -232885268 - AluY SINE Alu -3 308 27 565 301 102 0 chr2 17802586 17802730 -232885124 + L1ME4a LINE L1 5620 5803 -318 240 122 0 0 chr2 17802954 17802995 -232884859 + (TA)n Simple_repeat Simple_repeat 1 41 0 300 263 98 8 chr2 17803034 17803167 -232884687 + L1ME4a LINE L1 5966 6110 -11 937 215 11 0 chr2 17803778 17803964 -232883890 + MER5A DNA MER1_type 1 188 -1 225 280 13 27 chr2 17803964 17804034 -232883820 + MIR SINE MIR 76 144 -64 2465 143 60 38 chr2 17804363 17804782 -232883072 + MSTC LTR MaLR 1 428 0 182 389 80 18 chr2 17805020 17805133 -232882721 - L2 LINE L2 -17 3255 3136 1202 281 135 32 chr2 17806176 17806709 -232881145 - MLT2E LTR ERVL -14 614 27 333 273 124 29 chr2 17806711 17806953 -232880901 + HAL1 LINE L1 1213 1477 -1030 273 320 177 31 chr2 17807010 17807304 -232880550 + HAL1 LINE L1 1560 1896 -611 21 57 0 0 chr2 17807628 17807663 -232880191 + AT_rich Low_complexity Low_complexity 1 35 0 810 214 41 38 chr2 17808076 17808343 -232879511 + L1MC4 LINE L1 7775 8042 0 209 257 20 20 chr2 17808530 17808631 -232879223 + (TA)n Simple_repeat Simple_repeat 1 101 0 21593 119 9 13 chr2 17808994 17812266 -232875588 + L1P LINE L1 11 3269 -2877 391 329 66 28 chr2 17813138 17813351 -232874503 - MIR SINE MIR -20 242 22 275 188 12 141 chr2 17813574 17813659 -232874195 + L1MEd LINE L1 4 77 -6042 219 146 0 0 chr2 17813660 17813701 -232874153 + (GA)n Simple_repeat Simple_repeat 2 42 0 348 24 0 0 chr2 17813820 17813841 -232874013 + (CA)n Simple_repeat Simple_repeat 1 62 0 348 24 0 0 chr2 17813841 17813882 -232873972 + (CA)n Simple_repeat Simple_repeat 2 42 0 1851 176 23 38 chr2 17813882 17814229 -232873625 + MER2 DNA MER2_type 3 344 0 2273 105 0 0 chr2 17814460 17814756 -232873098 - AluSx SINE Alu -16 296 1 2138 106 7 20 chr2 17814759 17815061 -232872793 - AluSx SINE Alu -14 298 1 396 0 0 0 chr2 17815581 17815625 -232872229 + (TG)n Simple_repeat Simple_repeat 1 44 0 2117 106 0 3 chr2 17817556 17817840 -232870014 + AluSx SINE Alu 1 283 -29 240 163 0 0 chr2 17817849 17817892 -232869962 + GA-rich Low_complexity Low_complexity 2 44 0 22 56 0 0 chr2 17818427 17818463 -232869391 + AT_rich Low_complexity Low_complexity 1 36 0 216 0 0 0 chr2 17818530 17818554 -232869300 + (A)n Simple_repeat Simple_repeat 1 24 0 213 362 0 32 chr2 17819530 17819624 -232868230 - MIR SINE MIR -152 110 20 565 366 12 12 chr2 17819943 17820194 -232867660 + MIR SINE MIR 11 261 -1 1213 177 13 4 chr2 17821653 17821879 -232865975 + L1MC1 LINE L1 6100 6327 -6 28 0 0 0 chr2 17821897 17821925 -232865929 + AT_rich Low_complexity Low_complexity 1 28 0 183 186 0 0 chr2 17822764 17822807 -232865047 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 209 190 190 52 chr2 17822848 17822906 -232864948 - L2 LINE L2 -7 3265 3200 2072 109 40 3 chr2 17822911 17823240 -232864614 - THE1A LTR MaLR 0 355 15 11769 98 3 0 chr2 17823242 17824817 -232863037 - THE1A-int LTR MaLR 0 1580 1 2243 123 26 9 chr2 17824817 17825166 -232862688 - THE1A LTR MaLR 0 355 1 247 299 28 47 chr2 17825307 17825414 -232862440 - L2 LINE L2 -213 3059 2955 365 316 44 0 chr2 17825488 17825602 -232862252 - MIR SINE MIR -60 148 30 276 260 63 47 chr2 17827103 17827230 -232860624 + MIR SINE MIR 89 217 -45 334 317 81 0 chr2 17828271 17828394 -232859460 + MIR3 SINE MIR 38 170 -38 283 175 48 0 chr2 17828931 17828994 -232858860 + MIR SINE MIR 81 146 -62 637 262 84 5 chr2 17829237 17829428 -232858426 - MIR SINE MIR 0 262 57 272 309 99 31 chr2 17830147 17830309 -232857545 - MIR SINE MIR -56 206 34 279 157 0 0 chr2 17830791 17830842 -232857012 + (TG)n Simple_repeat Simple_repeat 2 52 0 186 333 62 0 chr2 17830880 17830961 -232856893 + L2 LINE L2 3154 3239 -33 1928 148 10 0 chr2 17831452 17831742 -232856112 + AluSx SINE Alu 1 293 -19 183 347 94 41 chr2 17831877 17832047 -232855807 - L2 LINE L2 -210 3062 2884 206 229 43 0 chr2 17832968 17833038 -232854816 + (TA)n Simple_repeat Simple_repeat 2 74 0 502 128 13 0 chr2 17833086 17833164 -232854690 - LTR8 LTR ERV1 0 691 613 11817 77 13 1 chr2 17833968 17835688 -232852166 + L1P LINE L1 3250 4990 -1156 2319 103 18 49 chr2 17836503 17836890 -232850964 - THE1C LTR MaLR 0 375 1 1544 187 19 28 chr2 17837274 17837633 -232850221 - MLT1A1 LTR MaLR 0 365 10 181 270 124 22 chr2 17837833 17837922 -232849932 - MIR3 SINE MIR -100 108 11 281 322 43 9 chr2 17840059 17840174 -232847680 - MIR3 SINE MIR -12 196 78 288 371 112 20 chr2 17840570 17840767 -232847087 + L2 LINE L2 3058 3272 0 219 139 0 0 chr2 17841189 17841225 -232846629 + (A)n Simple_repeat Simple_repeat 1 36 0 490 285 34 39 chr2 17842963 17843170 -232844684 - LTR33 LTR ERVL -308 213 8 325 315 42 24 chr2 17844605 17844770 -232843084 + MIR SINE MIR 47 214 -48 597 319 169 36 chr2 17844941 17845027 -232842827 - L2 LINE L2 -439 2875 2802 2080 119 3 10 chr2 17845027 17845322 -232842532 - AluSx SINE Alu -19 293 1 597 319 169 36 chr2 17845322 17845733 -232842121 - L2 LINE L2 -512 2802 2312 368 250 97 110 chr2 17845893 17846201 -232841653 - MLT1K LTR MaLR -14 574 271 336 244 126 31 chr2 17847740 17847867 -232839987 + L1MC/D LINE L1 5328 5466 -893 21 0 0 0 chr2 17847926 17847947 -232839907 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 17848079 17848114 -232839740 + AT_rich Low_complexity Low_complexity 1 35 0 261 305 38 29 chr2 17848891 17848996 -232838858 + MIR SINE MIR 36 141 -67 1957 102 19 75 chr2 17849008 17849114 -232838740 + L1MA3 LINE L1 5954 6064 -241 2002 108 56 0 chr2 17849114 17849229 -232838625 + AluY SINE Alu 1 108 -203 2198 54 0 4 chr2 17849229 17849487 -232838367 + AluY SINE Alu 48 304 -7 2002 108 56 0 chr2 17849487 17849657 -232838197 + AluY SINE Alu 108 302 -9 1957 102 19 75 chr2 17849657 17849923 -232837931 + L1MA3 LINE L1 6064 6305 0 29 98 0 0 chr2 17850853 17850945 -232836909 + AT_rich Low_complexity Low_complexity 1 92 0 5721 114 13 0 chr2 17851189 17852112 -232835742 - L1PB1 LINE L1 -4 6147 5215 1816 182 3 0 chr2 17852510 17852806 -232835048 + AluJo SINE Alu 1 297 -15 438 288 50 46 chr2 17854026 17854266 -232833588 - MLT1K LTR MaLR -254 334 94 2045 161 33 14 chr2 17854394 17854815 -232833039 + L1MA7 LINE L1 5859 6287 -4 211 267 17 17 chr2 17855227 17855287 -232832567 + L2 LINE L2 2667 2726 -588 230 337 69 10 chr2 17855429 17855530 -232832324 + L2 LINE L2 2965 3071 -201 299 296 121 30 chr2 17855948 17856080 -232831774 + MIR3 SINE MIR 3 146 -62 1314 295 58 66 chr2 17856130 17856907 -232830947 - L3 LINE CR1 0 1577 807 606 331 79 19 chr2 17857269 17857586 -232830268 - L3 LINE CR1 -758 819 484 283 315 26 153 chr2 17857613 17857921 -232829933 - L2 LINE L2 -39 3233 2965 1556 207 7 17 chr2 17860269 17860569 -232827285 - AluJo SINE Alu -15 297 1 187 318 186 34 chr2 17861085 17861472 -232826382 + L2 LINE L2 1981 2426 -888 198 0 0 0 chr2 17861561 17861583 -232826271 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6905 58 27 5 chr2 17861583 17862540 -232825314 - L1PA6 LINE L1 -11 6143 5178 312 91 0 0 chr2 17862542 17862586 -232825268 + (T)n Simple_repeat Simple_repeat 1 44 0 331 123 82 0 chr2 17862691 17862764 -232825090 + (TATAA)n Simple_repeat Simple_repeat 1 79 0 467 33 33 88 chr2 17862764 17862945 -232824909 + (TA)n Simple_repeat Simple_repeat 2 172 0 212 88 35 70 chr2 17862954 17863011 -232824843 + (TATAG)n Simple_repeat Simple_repeat 1 55 0 344 112 0 96 chr2 17863013 17863210 -232824644 + (TA)n Simple_repeat Simple_repeat 1 178 0 305 99 0 104 chr2 17863249 17863431 -232824423 + (TA)n Simple_repeat Simple_repeat 1 163 0 398 133 49 42 chr2 17863459 17863725 -232824129 + (TA)n Simple_repeat Simple_repeat 1 268 0 209 108 27 0 chr2 17863736 17863773 -232824081 + (CATA)n Simple_repeat Simple_repeat 4 41 0 328 258 94 30 chr2 17864779 17864879 -232822975 + MIR SINE MIR 39 143 -86 240 278 122 42 chr2 17865381 17865523 -232822331 - MIR SINE MIR -69 139 37 26 30 0 0 chr2 17866322 17866355 -232821499 + AT_rich Low_complexity Low_complexity 1 33 0 3572 218 45 18 chr2 17866497 17867315 -232820539 + MER21B LTR ERV1 15 854 -9 294 95 0 0 chr2 17868793 17868835 -232819019 + (TC)n Simple_repeat Simple_repeat 1 42 0 1234 182 33 28 chr2 17869453 17869816 -232818038 + MER31A LTR ERV1 8 485 0 2357 260 106 18 chr2 17870983 17871481 -232816373 - MER69B DNA AcHobo -1300 1226 773 7001 75 10 1 chr2 17871481 17873199 -232814655 - L1PA7 LINE L1 0 6154 4429 2357 260 106 18 chr2 17873199 17873680 -232814174 - MER69B DNA AcHobo -1753 773 152 335 247 87 13 chr2 17873670 17873820 -232814034 + MER69B DNA AcHobo 766 926 -300 * 2265 117 10 0 chr2 17873885 17874194 -232813660 - AluSx SINE Alu 0 312 1 431 271 25 8 chr2 17874200 17874322 -232813532 - MER69B DNA AcHobo -1085 141 18 2143 67 0 11 chr2 17874555 17874824 -232813030 - AluY SINE Alu -18 293 28 181 250 179 45 chr2 17875419 17875531 -232812323 - MIR SINE MIR 0 262 136 529 301 99 38 chr2 17875867 17876262 -232811592 + L1MEd LINE L1 595 1013 -5106 257 61 0 0 chr2 17876485 17876518 -232811336 - U2 snRNA snRNA -155 33 1 806 229 133 9 chr2 17877681 17877899 -232809955 - MIR SINE MIR -10 252 8 410 363 41 24 chr2 17878442 17878737 -232809117 + L2 LINE L2 2456 2755 -559 25 0 0 0 chr2 17878753 17878778 -232809076 + AT_rich Low_complexity Low_complexity 1 25 0 2521 100 17 0 chr2 17878862 17879211 -232808643 - THE1A LTR MaLR 0 355 1 960 227 32 0 chr2 17879517 17879733 -232808121 + MER58A DNA MER1_type 1 223 -1 25932 107 12 35 chr2 17880469 17885448 -232802406 + L1P3 LINE L1 5 4995 -1466 524 259 18 35 chr2 17886096 17886266 -232801588 + MIR3 SINE MIR 18 184 -24 185 171 0 29 chr2 17886419 17886454 -232801400 + L2 LINE L2 3224 3257 -15 2161 115 7 0 chr2 17886520 17886808 -232801046 + AluY SINE Alu 1 290 -21 2656 105 6 0 chr2 17887049 17887410 -232800444 + THE1B LTR MaLR 2 364 0 239 154 31 15 chr2 17887495 17887560 -232800294 + (TA)n Simple_repeat Simple_repeat 1 66 0 21 57 0 0 chr2 17887698 17887733 -232800121 + AT_rich Low_complexity Low_complexity 1 35 0 280 281 49 12 chr2 17888471 17888553 -232799301 - MIR SINE MIR -90 172 88 21 0 0 0 chr2 17889411 17889432 -232798422 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 17890533 17890554 -232797300 + AT_rich Low_complexity Low_complexity 1 21 0 1729 213 43 47 chr2 17890677 17891205 -232796649 + L1MEd LINE L1 1153 1680 -4449 1887 147 55 33 chr2 17891205 17891572 -232796282 + THE1C LTR MaLR 1 375 0 1729 213 43 47 chr2 17891572 17891645 -232796209 + L1MEd LINE L1 1680 1752 -4377 913 231 28 69 chr2 17891662 17891980 -232795874 - MLT1B LTR MaLR -11 379 75 1752 186 30 8 chr2 17891980 17892341 -232795513 - Tigger2 DNA MER2_type -1 2717 2349 1015 190 26 0 chr2 17892340 17892566 -232795288 - Tigger2 DNA MER2_type -2486 232 1 * 365 154 0 15 chr2 17892572 17892637 -232795217 - MLT1B LTR MaLR -310 64 1 837 213 73 47 chr2 17892650 17893035 -232794819 + L1MEd LINE L1 1801 2195 -3934 2302 189 37 9 chr2 17893360 17893820 -232794034 + MLT2B2 LTR ERVL 1 473 -42 3904 147 28 6 chr2 17893820 17894492 -232793362 - HSMAR2 DNA Mariner -1 1301 615 2931 200 196 32 chr2 17894751 17895731 -232792123 + MER52A LTR ERV1 56 1196 -559 397 171 0 0 chr2 17895725 17895795 -232792059 + MER52A LTR ERV1 1686 1755 0 * 3200 130 50 20 chr2 17895796 17896396 -232791458 - HSMAR2 DNA Mariner -683 619 2 378 0 0 0 chr2 17896396 17896438 -232791416 + (TG)n Simple_repeat Simple_repeat 2 43 0 276 361 0 0 chr2 17897075 17897158 -232790696 + MIR SINE MIR 38 120 -88 234 0 0 0 chr2 17897795 17897821 -232790033 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 611 189 0 0 chr2 17897832 17897943 -232789911 - FLAM_C SINE Alu -32 111 1 365 260 5 10 chr2 17898546 17898645 -232789209 - MIR SINE MIR -39 169 66 1454 182 14 47 chr2 17898881 17899178 -232788676 - AluJo SINE Alu -25 287 1 1620 206 4 4 chr2 17899247 17899523 -232788331 + AluJb SINE Alu 3 278 -34 255 61 0 0 chr2 17899523 17899556 -232788298 + (CA)n Simple_repeat Simple_repeat 2 34 0 190 244 259 8 chr2 17899685 17899816 -232788038 + L2 LINE L2 3008 3171 -142 2022 153 66 33 chr2 17899817 17900356 -232787498 + MLT2A2 LTR ERVL 1 554 0 487 258 8 16 chr2 17900358 17900482 -232787372 + L2 LINE L2 3189 3311 -2 629 321 30 28 chr2 17901188 17901514 -232786340 + MLT1G LTR MaLR 1 287 -303 894 147 0 7 chr2 17903420 17903556 -232784298 - AluJo SINE Alu -177 135 1 21 0 0 0 chr2 17903722 17903743 -232784111 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 17905041 17905063 -232782791 + AT_rich Low_complexity Low_complexity 1 22 0 1678 153 7 29 chr2 17905148 17905429 -232782425 + AluSx SINE Alu 1 275 -37 327 282 89 0 chr2 17905499 17905623 -232782231 - L2 LINE L2 0 3272 3138 2168 89 3 14 chr2 17906034 17906325 -232781529 - AluY SINE Alu -23 288 1 279 319 66 60 chr2 17906325 17906507 -232781347 + MER5A DNA MER1_type 1 183 -6 287 353 52 44 chr2 17906360 17906496 -232781358 - MER5B DNA MER1_type -24 154 18 1058 218 62 64 chr2 17907438 17907906 -232779948 - LTR37B LTR ERV1 0 468 2 650 199 37 118 chr2 17908091 17908369 -232779485 - MER31-int LTR ERV1 -881 4055 3841 244 154 31 31 chr2 17908385 17908450 -232779404 + LTR37B LTR ERV1 154 218 -250 2281 171 14 0 chr2 17909686 17910119 -232777735 + L1MB7 LINE L1 5746 6184 0 442 181 67 9 chr2 17910126 17910231 -232777623 + Tigger6 DNA MER2_type 1392 1502 -95 804 160 0 15 chr2 17910589 17910720 -232777134 - FLAM_C SINE Alu -4 129 1 211 226 12 83 chr2 17911635 17911676 -232776178 + GA-rich Low_complexity Low_complexity 2 44 -35 2064 171 34 14 chr2 17911676 17912033 -232775821 - THE1B LTR MaLR 0 364 1 11711 92 4 4 chr2 17912033 17913613 -232774241 - THE1B-int LTR MaLR 0 1580 2 2043 168 34 14 chr2 17913614 17913971 -232773883 - THE1B LTR MaLR 0 364 1 211 226 12 83 chr2 17913971 17914010 -232773844 + GA-rich Low_complexity Low_complexity 42 79 0 36 53 0 0 chr2 17914103 17914160 -232773694 + AT_rich Low_complexity Low_complexity 1 57 0 334 173 49 0 chr2 17914172 17914253 -232773601 + MER61E LTR ERV1 1 85 -484 514 237 60 35 chr2 17914505 17914855 -232772999 + MER52A LTR ERV1 334 1232 -32 1524 150 62 91 chr2 17915106 17915492 -232772362 + THE1C LTR MaLR 1 375 0 651 217 66 50 chr2 17916774 17916972 -232770882 - MER3 DNA MER1_type 0 209 9 2178 182 14 43 chr2 17918225 17918664 -232769190 + MSTB LTR MaLR 1 426 0 494 243 20 64 chr2 17918689 17918891 -232768963 - LTR65 LTR ERV1 -476 193 1 679 300 76 17 chr2 17918923 17919160 -232768694 - MIR SINE MIR -10 252 2 381 109 0 0 chr2 17919424 17919488 -232768366 + (TTTA)n Simple_repeat Simple_repeat 1 64 0 676 133 19 0 chr2 17919488 17919593 -232768261 - AluY SINE Alu -32 279 173 190 278 167 40 chr2 17920985 17921111 -232766743 + MER5B DNA MER1_type 37 178 0 21 36 0 0 chr2 17921533 17921561 -232766293 + AT_rich Low_complexity Low_complexity 1 28 0 235 318 62 40 chr2 17922237 17922511 -232765343 - L1ME LINE L1 -390 5731 5452 229 125 0 0 chr2 17922575 17922615 -232765239 - L1ME LINE L1 -1009 5350 5311 291 98 0 0 chr2 17923452 17923493 -232764361 - MSTA LTR MaLR 0 428 388 2132 124 13 3 chr2 17923493 17923799 -232764055 + AluSg SINE Alu 1 309 -1 555 132 0 0 chr2 17923801 17923892 -232763962 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 2052 140 45 24 chr2 17923907 17924285 -232763569 - MSTA LTR MaLR -42 386 1 1164 265 124 12 chr2 17924452 17924879 -232762975 - MLT1E LTR MaLR -18 575 101 469 324 29 29 chr2 17924973 17925214 -232762640 + L2 LINE L2 3073 3313 0 1827 118 28 42 chr2 17925733 17926020 -232761834 + AluSc SINE Alu 24 306 -3 1781 140 22 11 chr2 17926391 17926669 -232761185 + AluSq SINE Alu 1 281 -32 545 287 54 0 chr2 17927147 17927276 -232760578 + L2 LINE L2 3137 3272 0 188 241 114 13 chr2 17927431 17927510 -232760344 + L2 LINE L2 2926 3012 -260 373 316 63 28 chr2 17927862 17928179 -232759675 - L1ME LINE L1 -350 5820 5493 22 70 0 0 chr2 17928285 17928328 -232759526 + AT_rich Low_complexity Low_complexity 1 43 0 774 259 92 0 chr2 17928601 17928829 -232759025 + MIR SINE MIR 1 249 -13 180 359 23 31 chr2 17928897 17929025 -232758829 + L2 LINE L2 3173 3299 -14 401 340 20 0 chr2 17929799 17929946 -232757908 - LTR16A LTR ERVL -100 350 201 21 0 0 0 chr2 17930208 17930229 -232757625 + AT_rich Low_complexity Low_complexity 1 21 0 2228 118 0 6 chr2 17930368 17930682 -232757172 + AluSx SINE Alu 1 312 0 644 270 118 48 chr2 17930717 17930772 -232757082 + HAL1 LINE L1 1243 1293 -1214 2300 114 0 0 chr2 17930772 17931080 -232756774 + AluSg SINE Alu 1 308 -2 644 270 118 48 chr2 17931080 17931543 -232756311 + HAL1 LINE L1 1293 1797 -710 373 279 66 47 chr2 17931865 17932086 -232755768 + HAL1b LINE L1 746 2378 -129 266 257 92 0 chr2 17932131 17932240 -232755614 + HAL1 LINE L1 2243 2361 -146 237 117 50 0 chr2 17932399 17932459 -232755395 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 213 350 70 20 chr2 17932631 17932731 -232755123 - L2 LINE L2 -11 3261 3157 983 281 56 20 chr2 17933079 17933474 -232754380 - MLT1I LTR MaLR 0 409 1 271 373 57 6 chr2 17935056 17935214 -232752640 + MIR SINE MIR 97 262 0 21 0 0 0 chr2 17935692 17935713 -232752141 + AT_rich Low_complexity Low_complexity 1 21 0 3883 229 25 18 chr2 17935803 17936900 -232750954 - L1PA15 LINE L1 -2129 4017 2914 2189 230 270 58 chr2 17936895 17937039 -232750815 + L1PA15 LINE L1 3986 4098 -2067 * 1813 165 7 0 chr2 17937039 17937312 -232750542 - AluSx SINE Alu -37 275 1 2189 230 270 58 chr2 17937312 17938390 -232749464 + L1PA15 LINE L1 4098 5485 -680 1848 164 19 34 chr2 17938399 17938778 -232749076 - THE1C LTR MaLR -2 373 1 5322 129 66 22 chr2 17938778 17939754 -232748100 - THE1C-int LTR MaLR 0 1580 563 398 143 0 14 chr2 17939854 17939924 -232747930 - THE1C-int LTR MaLR -1509 71 3 2072 143 27 19 chr2 17939928 17940298 -232747556 - THE1C LTR MaLR -2 373 1 4149 130 6 25 chr2 17940298 17940990 -232746864 + L1PA15 LINE L1 5481 6159 -6 22 0 0 0 chr2 17941377 17941399 -232746455 + AT_rich Low_complexity Low_complexity 1 22 0 1742 176 27 45 chr2 17941409 17941824 -232746030 + L1M4 LINE L1 5172 5572 -612 2558 75 0 0 chr2 17941824 17942132 -232745722 + AluY SINE Alu 1 308 -3 1742 176 27 45 chr2 17942132 17942310 -232745544 + L1M4 LINE L1 5572 5752 -432 666 241 47 11 chr2 17942313 17942504 -232745350 + MER3 DNA MER1_type 11 208 -1 344 322 91 83 chr2 17942608 17942981 -232744873 - L2 LINE L2 -3 3269 2894 1997 223 68 38 chr2 17943077 17943713 -232744141 - L1MC4 LINE L1 -605 7437 6783 180 289 92 13 chr2 17946039 17946115 -232741739 + L2 LINE L2 2670 2751 -563 255 95 238 48 chr2 17946291 17946354 -232741500 - MADE1 DNA Mariner -2 78 4 557 116 11 63 chr2 17946903 17947093 -232740761 + (TA)n Simple_repeat Simple_repeat 1 180 0 246 303 148 45 chr2 17948167 17948322 -232739532 + L3 LINE CR1 1274 1444 -133 200 159 0 23 chr2 17948739 17948783 -232739071 + (TA)n Simple_repeat Simple_repeat 2 44 0 1711 196 0 13 chr2 17949143 17949444 -232738410 - AluJo SINE Alu -15 297 1 228 385 11 0 chr2 17951217 17951308 -232736546 - MIR SINE MIR -87 121 30 38 75 0 0 chr2 17953050 17953130 -232734724 + AT_rich Low_complexity Low_complexity 1 80 0 326 213 193 100 chr2 17953847 17954086 -232733768 + L3 LINE CR1 1191 1451 -126 270 328 49 86 chr2 17955483 17955809 -232732045 - L2 LINE L2 -52 3220 2907 249 289 159 50 chr2 17956027 17956266 -232731588 - L2 LINE L2 -739 2575 2311 5008 161 57 20 chr2 17956314 17956398 -232731456 - L1MC1 LINE L1 -11 6322 6243 2201 117 47 33 chr2 17956398 17956757 -232731097 + THE1B LTR MaLR 1 364 0 5008 161 57 20 chr2 17956757 17957769 -232730085 - L1MC1 LINE L1 -90 6243 5186 2383 168 37 63 chr2 17957832 17958433 -232729421 - L1MD3 LINE L1 -8 7987 7403 309 185 46 0 chr2 17958435 17958500 -232729354 - MLT1F1 LTR MaLR -445 122 55 2209 145 80 10 chr2 17958765 17959165 -232728689 + MSTA LTR MaLR 1 428 0 324 379 86 0 chr2 17961759 17961899 -232725955 - L2 LINE L2 -5 3267 3116 217 321 73 9 chr2 17962101 17962210 -232725644 - MIR SINE MIR -122 140 25 300 242 95 0 chr2 17962915 17963010 -232724844 + MIR SINE MIR 76 179 -83 7085 40 24 0 chr2 17963743 17965206 -232722648 + L1PA5 LINE L1 4668 6151 -3 201 417 52 0 chr2 17965265 17965380 -232722474 - L2 LINE L2 -460 2854 2734 623 299 42 17 chr2 17965475 17965716 -232722138 + MIR SINE MIR 12 258 -4 265 429 40 0 chr2 17965864 17965990 -232721864 - L2 LINE L2 -176 3096 2966 2039 130 10 0 chr2 17967569 17967870 -232719984 + AluY SINE Alu 1 304 -7 449 254 129 26 chr2 17967874 17968067 -232719787 + MIR SINE MIR 49 261 -1 323 317 122 44 chr2 17969016 17969287 -232718567 - L2 LINE L2 -63 3209 2918 207 336 58 19 chr2 17969433 17969537 -232718317 - L2 LINE L2 -178 3094 2987 254 287 155 39 chr2 17970204 17970333 -232717521 + L2 LINE L2 3129 3272 0 247 159 130 43 chr2 17970399 17970468 -232717386 - MIR3 SINE MIR -23 185 111 878 222 18 114 chr2 17970594 17970937 -232716917 + L2 LINE L2 3003 3312 -1 1517 138 82 8 chr2 17971060 17971339 -232716515 + MSTA LTR MaLR 113 428 0 280 305 54 29 chr2 17971347 17971586 -232716268 - L1ME LINE L1 -284 5837 5593 403 369 39 39 chr2 17972132 17972441 -232715413 + L2 LINE L2 2534 2842 -472 442 253 0 10 chr2 17972907 17973006 -232714848 + MIR3 SINE MIR 87 184 -24 314 264 23 23 chr2 17973025 17973112 -232714742 - L2 LINE L2 -6 3307 3221 2086 314 121 34 chr2 17973265 17974794 -232713060 - L2 LINE L2 -367 2947 1286 337 344 36 40 chr2 17975584 17975808 -232712046 + L2 LINE L2 2829 3051 -221 183 250 0 0 chr2 17976959 17976991 -232710863 - MIR SINE MIR -144 64 33 221 188 83 0 chr2 17978353 17978401 -232709453 - MER91C DNA MER1_type -53 87 36 330 389 79 26 chr2 17978520 17978911 -232708943 + L2 LINE L2 2065 2476 -838 333 172 104 45 chr2 17979680 17979814 -232708040 - LTR19A LTR ERV1 -3 483 342 227 333 12 12 chr2 17980081 17980162 -232707692 + MIR SINE MIR 9 89 -173 1046 219 30 0 chr2 17980492 17980693 -232707161 - MER63A DNA MER1_type -3 207 1 860 292 109 5 chr2 17980698 17981082 -232706772 - MLT1J2 LTR MaLR -24 426 3 415 290 49 38 chr2 17981082 17981265 -232706589 - MIR SINE MIR -19 243 59 590 283 76 52 chr2 17982685 17982975 -232704879 - MLT1J1 LTR MaLR -107 339 43 578 304 6 0 chr2 17985632 17985790 -232702064 - MIR SINE MIR -34 228 70 217 277 188 0 chr2 17985860 17985961 -232701893 + MIR SINE MIR 132 251 -11 1370 231 101 90 chr2 17986263 17987029 -232700825 + LTR41 LTR ERVL 3 523 0 293 264 42 0 chr2 17988644 17988716 -232699138 - MIR SINE MIR -134 128 54 275 26 51 0 chr2 17989688 17989727 -232698127 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr2 17990180 17990202 -232697652 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr2 17990763 17990812 -232697042 + AT_rich Low_complexity Low_complexity 1 49 0 2063 108 30 7 chr2 17991009 17991306 -232696548 + AluSg SINE Alu 1 304 -6 450 323 132 25 chr2 17991321 17991640 -232696214 - L1ME4a LINE L1 -237 5884 5532 518 319 90 18 chr2 17992873 17993152 -232694702 + L1MEd LINE L1 938 1236 -4883 237 219 104 10 chr2 17993160 17993256 -232694598 + L1MEd LINE L1 1238 1342 -4787 233 152 22 0 chr2 17993289 17993335 -232694519 + L1 LINE L1 4027 4073 -2073 1214 234 8 14 chr2 17993436 17993799 -232694055 + L1 LINE L1 4299 4659 -1487 * 2812 187 44 16 chr2 17993775 17994443 -232693411 - L1M1 LINE L1 -743 5403 4778 378 0 0 0 chr2 17994443 17994485 -232693369 + (TG)n Simple_repeat Simple_repeat 2 43 0 2812 187 44 16 chr2 17994485 17994585 -232693269 - L1M1 LINE L1 -1368 4778 4682 3977 145 35 4 chr2 17994585 17995307 -232692547 + L1MA4 LINE L1 5557 6300 0 262 119 34 0 chr2 17995312 17995371 -232692483 + L1MB4 LINE L1 6120 6180 0 351 0 0 0 chr2 17995948 17995987 -232691867 + (TA)n Simple_repeat Simple_repeat 2 40 0 392 213 42 75 chr2 17996288 17996584 -232691270 + MLT1H LTR MaLR 216 549 0 38 22 0 0 chr2 17997091 17997136 -232690718 + AT_rich Low_complexity Low_complexity 1 45 0 337 197 53 0 chr2 17997632 17997708 -232690146 - MLT1J2 LTR MaLR -370 80 1 183 80 0 0 chr2 17998222 17998247 -232689607 + (TG)n Simple_repeat Simple_repeat 2 26 0 309 365 47 0 chr2 17998321 17998428 -232689426 - L2 LINE L2 -20 3252 3141 2225 168 5 15 chr2 17998875 17999269 -232688585 - MLT1B LTR MaLR 0 390 1 459 261 103 18 chr2 17999384 17999648 -232688206 - L2 LINE L2 -544 2770 2437 293 266 32 21 chr2 17999658 17999752 -232688102 + MIR SINE MIR 56 150 -112 2459 58 0 26 chr2 18000342 18000650 -232687204 + AluY SINE Alu 1 300 -11 240 295 114 19 chr2 18001958 18002063 -232685791 - MIR SINE MIR -74 134 20 387 83 0 0 chr2 18002514 18002574 -232685280 + (TG)n Simple_repeat Simple_repeat 2 61 0 350 267 93 24 chr2 18002598 18002762 -232685092 - MIR SINE MIR -55 153 22 760 224 59 59 chr2 18003357 18003576 -232684278 + MER20 DNA MER1_type 1 219 0 304 311 98 8 chr2 18005785 18005917 -232681937 + MIR SINE MIR 82 225 -37 241 200 40 0 chr2 18006720 18006770 -232681084 - MIR SINE MIR -80 128 77 260 246 146 36 chr2 18007726 18007836 -232680018 - L2 LINE L2 0 3272 3151 791 241 127 4 chr2 18008507 18008735 -232679119 + MIR SINE MIR 7 262 0 392 285 0 41 chr2 18008961 18009084 -232678770 + MLT1F LTR MaLR 187 304 -286 445 224 6 117 chr2 18009159 18009338 -232678516 + MLT1F LTR MaLR 384 542 0 261 372 43 18 chr2 18010603 18010767 -232677087 + MIR SINE MIR 20 187 -75 2517 92 16 9 chr2 18011307 18011694 -232676160 - L1PA11 LINE L1 -21 6153 5766 355 263 43 50 chr2 18011732 18011916 -232675938 - MIR SINE MIR -46 216 37 319 261 252 8 chr2 18012195 18012314 -232675540 + MIR SINE MIR 50 197 -65 218 386 48 24 chr2 18012337 18012547 -232675307 + L2 LINE L2 3008 3222 -91 262 244 78 44 chr2 18012586 18012676 -232675178 + MER91C DNA MER1_type 48 140 0 193 375 163 12 chr2 18013262 18013422 -232674432 - L2 LINE L2 -1 3271 3088 2036 123 23 0 chr2 18014210 18014511 -232673343 - AluSx SINE Alu -4 308 1 1701 214 19 19 chr2 18015868 18016242 -232671612 + MLT1A2 LTR MaLR 1 374 0 722 205 8 8 chr2 18018017 18018263 -232669591 + CT-rich Low_complexity Low_complexity 1 246 0 258 156 0 0 chr2 18018279 18018324 -232669530 + (CCA)n Simple_repeat Simple_repeat 1 45 0 370 300 53 24 chr2 18019905 18020075 -232667779 - MIR SINE MIR -46 216 42 333 0 0 0 chr2 18020721 18020758 -232667096 + (CA)n Simple_repeat Simple_repeat 1 37 0 32 26 0 0 chr2 18023071 18023110 -232664744 + AT_rich Low_complexity Low_complexity 1 39 0 2068 138 39 30 chr2 18023115 18023476 -232664378 + THE1B LTR MaLR 1 364 0 1565 187 0 26 chr2 18024390 18024700 -232663154 - AluJo SINE Alu -10 302 1 7224 121 29 14 chr2 18024832 18026220 -232661634 + L1P3 LINE L1 12 1428 -4718 647 237 73 6 chr2 18026674 18026851 -232661003 - MER5A DNA MER1_type 0 189 1 8270 157 9 10 chr2 18027089 18028801 -232659053 - L1PA13 LINE L1 -2 6161 4443 2466 11 60 0 chr2 18028801 18029085 -232658769 + AluY SINE Alu 1 301 -10 8270 157 9 10 chr2 18029085 18029693 -232658161 - L1PA13 LINE L1 -1720 4443 3836 323 237 11 21 chr2 18029754 18029847 -232658007 + L2 LINE L2 3222 3313 0 1925 161 6 3 chr2 18031965 18032276 -232655578 - AluSx SINE Alu 0 312 1 27 29 0 0 chr2 18032819 18032853 -232655001 + AT_rich Low_complexity Low_complexity 1 34 0 787 169 58 9 chr2 18033101 18033326 -232654528 - MER113 DNA MER1_type? -278 243 8 367 297 149 7 chr2 18033509 18033657 -232654197 - MIR SINE MIR -44 218 50 224 0 0 61 chr2 18033733 18033766 -232654088 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2698 171 3 91 chr2 18034675 18035282 -232652572 - MLT2B3 LTR ERVL 0 554 1 2097 138 75 0 chr2 18035750 18036126 -232651728 - L1PA16 LINE L1 -4 6162 5759 212 298 0 0 chr2 18036392 18036439 -232651415 - MIR SINE MIR -63 145 99 1205 173 195 12 chr2 18036564 18036887 -232650967 - MLT1B LTR MaLR -1 389 8 297 313 159 30 chr2 18036965 18037198 -232650656 - L2 LINE L2 0 3272 3010 180 111 0 0 chr2 18037724 18037751 -232650103 + (CA)n Simple_repeat Simple_repeat 1 27 0 30 0 0 0 chr2 18037764 18037794 -232650060 + AT_rich Low_complexity Low_complexity 1 30 0 276 200 17 0 chr2 18038034 18038094 -232649760 + L1ME LINE L1 5533 5593 -528 1619 274 97 13 chr2 18038238 18039095 -232648759 - L1MEc LINE L1 -2661 3554 2626 642 316 30 27 chr2 18039163 18039603 -232648251 - L1MEc LINE L1 -5919 477 37 342 286 46 14 chr2 18039609 18039826 -232648028 - L1MCa LINE L1 -3795 2631 2408 229 239 83 83 chr2 18040016 18040234 -232647620 - L1MEd LINE L1 -5109 1010 793 503 316 106 43 chr2 18040557 18041254 -232646600 - L1MEd LINE L1 -5328 791 2 183 42 0 0 chr2 18041667 18041691 -232646163 + (T)n Simple_repeat Simple_repeat 1 24 0 1933 108 11 126 chr2 18041733 18042114 -232645740 - MER1B DNA MER1_type 0 337 1 229 323 8 24 chr2 18042134 18042145 -232645709 + (CATATA)n Simple_repeat Simple_repeat 2 12 -114 905 227 27 32 chr2 18042145 18042365 -232645489 - MER20 DNA MER1_type 0 219 1 229 323 8 24 chr2 18042365 18042480 -232645374 + (CATATA)n Simple_repeat Simple_repeat 12 126 0 502 228 2 23 chr2 18042550 18042683 -232645171 - MIR SINE MIR -71 137 59 725 349 60 17 chr2 18043022 18043450 -232644404 + LTR16A LTR ERVL 4 443 -7 22 56 0 0 chr2 18044463 18044499 -232643355 + AT_rich Low_complexity Low_complexity 1 36 0 428 291 47 17 chr2 18044507 18044741 -232643113 - L1MEc LINE L1 -1888 4327 4087 1224 264 161 14 chr2 18044887 18045407 -232642447 + MLT1E2 LTR MaLR 30 626 0 373 316 64 28 chr2 18045408 18045832 -232642022 - L1MEc LINE L1 -2282 3933 3495 698 200 19 0 chr2 18045905 18046060 -232641794 + L1MB1 LINE L1 6011 6168 0 293 283 117 8 chr2 18046060 18046180 -232641674 - MLT1J LTR MaLR -45 466 334 3879 207 113 126 chr2 18046180 18046668 -232641186 - L1MCa LINE L1 -4213 2213 1721 2344 77 0 7 chr2 18046668 18046968 -232640886 + AluY SINE Alu 1 298 -13 3879 207 113 126 chr2 18046968 18047562 -232640292 - L1MCa LINE L1 -4705 1721 1121 8010 125 11 28 chr2 18047562 18048884 -232638970 - HSMAR2 DNA Mariner -1 1301 2 3879 207 113 126 chr2 18048884 18050021 -232637833 - L1MCa LINE L1 -5305 1121 20 1810 261 55 17 chr2 18050025 18050895 -232636959 - L1MEc LINE L1 -4079 2317 1415 453 204 0 0 chr2 18050895 18050983 -232636871 - MER47B DNA MER2_type 0 418 331 947 249 0 0 chr2 18050984 18051193 -232636661 + MER2 DNA MER2_type 2 210 -135 1380 226 20 10 chr2 18051287 18051593 -232636261 - MER47B DNA MER2_type -103 315 7 693 189 20 0 chr2 18053178 18053326 -232634528 - L1MA10 LINE L1 -9 6325 6175 222 156 0 0 chr2 18053537 18053582 -232634272 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 181 339 81 0 chr2 18054477 18054539 -232633315 - L2 LINE L2 -38 3234 3168 201 197 0 0 chr2 18054800 18054861 -232632993 + A-rich Low_complexity Low_complexity 1 61 0 1153 282 56 13 chr2 18055494 18056043 -232631811 + L1MCa LINE L1 1493 2255 -4352 1713 205 5 30 chr2 18056049 18056419 -232631435 - MLT1A1 LTR MaLR -4 361 1 329 91 0 0 chr2 18056906 18056961 -232630893 - L1MA4A LINE L1 -1 6302 6248 1282 159 8 4 chr2 18056968 18057207 -232630647 + LTR1 LTR ERV1 12 251 -534 * 2505 132 63 89 chr2 18057188 18057803 -232630051 + LTR1 LTR ERV1 187 785 0 1373 156 30 7 chr2 18057803 18058073 -232629781 - L1MA4A LINE L1 -46 6257 5982 206 310 23 69 chr2 18058953 18059040 -232628814 - L2 LINE L2 -33 3280 3198 368 325 65 46 chr2 18059850 18060219 -232627635 + L2 LINE L2 2511 2886 -428 305 371 40 0 chr2 18060461 18060585 -232627269 + MIR SINE MIR 108 236 -26 229 293 37 0 chr2 18060677 18060759 -232627095 + L2 LINE L2 3229 3313 0 186 43 0 0 chr2 18060849 18060872 -232626982 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 462 279 8 8 chr2 18061619 18061741 -232626113 - MIR SINE MIR -126 136 15 2196 130 0 0 chr2 18063145 18063438 -232624416 + AluSx SINE Alu 1 293 -19 189 0 0 0 chr2 18063453 18063474 -232624380 + (GA)n Simple_repeat Simple_repeat 2 22 0 469 310 35 23 chr2 18063509 18063680 -232624174 - MIR SINE MIR -70 192 20 586 302 36 9 chr2 18064650 18064872 -232622982 + MIR SINE MIR 21 248 -14 205 256 22 139 chr2 18064921 18065058 -232622796 + L2 LINE L2 2976 3096 -176 219 254 227 9 chr2 18065070 18065180 -232622674 - L2 LINE L2 0 3272 3139 272 213 9 65 chr2 18065276 18065384 -232622470 + T-rich Low_complexity Low_complexity 4 105 0 201 147 0 0 chr2 18065400 18065434 -232622420 + (TC)n Simple_repeat Simple_repeat 1 34 0 228 333 0 24 chr2 18065466 18065550 -232622304 - L2 LINE L2 -219 3053 2972 257 321 86 68 chr2 18065576 18065971 -232621883 - L2 LINE L2 -353 2961 2560 1686 300 173 15 chr2 18066248 18067243 -232620611 - L2 LINE L2 -175 3138 1985 434 236 16 47 chr2 18068300 18068427 -232619427 + LTR67 LTR ERVL 405 527 -30 334 301 11 0 chr2 18068596 18068689 -232619165 + L1MC4 LINE L1 6631 6724 -1318 230 271 45 77 chr2 18069001 18069116 -232618738 + HAL1b LINE L1 431 541 -807 2305 103 0 0 chr2 18069116 18069416 -232618438 - AluSx SINE Alu -12 300 1 230 271 45 77 chr2 18069416 18069455 -232618399 + HAL1b LINE L1 541 580 -768 434 258 58 53 chr2 18069686 18070016 -232617838 + L1M4 LINE L1 4103 4437 -1709 900 106 8 0 chr2 18070016 18070148 -232617706 + L1PA7 LINE L1 6019 6151 -3 434 258 58 53 chr2 18070148 18070197 -232617657 + L1M4 LINE L1 4437 4484 -1662 282 373 180 8 chr2 18070339 18070583 -232617271 + L2 LINE L2 2967 3252 -20 2676 97 23 0 chr2 18070930 18071321 -232616533 + L1PA13 LINE L1 5764 6163 0 597 134 0 0 chr2 18071663 18071760 -232616094 - L1PB1 LINE L1 -8 6143 6047 384 298 149 6 chr2 18072098 18072279 -232615575 + MIR SINE MIR 56 262 0 434 218 10 59 chr2 18072402 18072503 -232615351 + L2 LINE L2 3194 3289 -24 1809 240 96 1 chr2 18072807 18073495 -232614359 + L1M4 LINE L1 2282 3034 -3112 407 271 48 60 chr2 18073487 18073756 -232614098 - L1MC4a LINE L1 -1655 6153 5888 * 200 29 114 0 chr2 18074555 18074590 -232613264 + (TTAAA)n Simple_repeat Simple_repeat 2 40 0 491 267 102 26 chr2 18074692 18074933 -232612921 + MIR SINE MIR 3 262 0 221 329 95 37 chr2 18075144 18075439 -232612415 + L2 LINE L2 1908 2219 -1095 591 309 64 27 chr2 18075442 18075630 -232612224 + MER91A DNA MER1_type 1 195 -1 229 325 102 37 chr2 18075685 18075931 -232611923 + L2 LINE L2 2249 2510 -804 739 277 146 9 chr2 18075943 18076286 -232611568 + LTR16A LTR ERVL 18 407 -43 595 347 60 24 chr2 18076934 18077317 -232610537 - L1MDa LINE L1 -2206 4334 3938 418 134 0 0 chr2 18077479 18077546 -232610308 + L1PA11 LINE L1 6096 6162 -12 3045 64 5 0 chr2 18077549 18077940 -232609914 + L1PA5 LINE L1 5762 6154 0 385 290 83 19 chr2 18078084 18078498 -232609356 - L1MDa LINE L1 -2897 3643 3175 4138 80 11 0 chr2 18078498 18079045 -232608809 - MER41A LTR ERV1 0 554 2 385 290 83 19 chr2 18079045 18079260 -232608594 - L1MDa LINE L1 -3365 3175 2975 3989 128 44 19 chr2 18079404 18080153 -232607701 - Tigger3(Golem) DNA MER2_type -1 3028 2261 347 200 15 0 chr2 18080155 18080220 -232607634 - Tigger3(Golem) DNA MER2_type -2949 80 15 416 233 79 73 chr2 18080311 18080582 -232607272 - L1MDa LINE L1 -3829 2724 2453 200 347 0 0 chr2 18081186 18081235 -232606619 + L2 LINE L2 3242 3290 -23 254 364 102 0 chr2 18081295 18081413 -232606441 + MIR SINE MIR 18 147 -61 210 91 0 0 chr2 18081455 18081488 -232606366 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 306 329 49 53 chr2 18082779 18083004 -232604850 - L1MC4a LINE L1 -1882 5926 5703 21 0 0 0 chr2 18083134 18083155 -232604699 + AT_rich Low_complexity Low_complexity 1 21 0 382 337 35 43 chr2 18083359 18083614 -232604240 + MIR SINE MIR 4 256 -6 231 114 0 0 chr2 18083614 18083649 -232604205 + (CAT)n Simple_repeat Simple_repeat 2 36 0 488 308 102 84 chr2 18086736 18087070 -232600784 - L2 LINE L2 -1 3271 2932 187 375 0 0 chr2 18087259 18087307 -232600547 - L2 LINE L2 -24 3289 3242 751 298 52 22 chr2 18088041 18088403 -232599451 + L1MEc LINE L1 27 399 -5997 575 203 68 17 chr2 18088409 18088586 -232599268 + L1MB5 LINE L1 5140 5325 -821 2387 186 10 0 chr2 18088591 18089091 -232598763 - L1P LINE L1 -869 5277 4773 2917 188 32 140 chr2 18089394 18090448 -232597406 + MER52A LTR ERV1 379 1303 -452 1697 197 0 3 chr2 18090451 18090745 -232597109 + AluJo SINE Alu 1 293 -19 580 253 49 8 chr2 18090748 18091037 -232596817 - MLT1E-int LTR MaLR -920 451 1 1868 244 69 52 chr2 18091040 18091619 -232596235 - MLT1E LTR MaLR -3 590 2 446 246 106 0 chr2 18091624 18091766 -232596088 + MIR SINE MIR 50 206 -56 1811 194 59 14 chr2 18092068 18092506 -232595348 + L1MB5 LINE L1 5717 6174 0 396 330 55 61 chr2 18093107 18093582 -232594272 + MLT1K LTR MaLR 92 563 -25 385 261 15 8 chr2 18093698 18093832 -232594022 + (CTA)n Simple_repeat Simple_repeat 1 135 0 246 62 0 0 chr2 18097404 18097436 -232590418 + (CA)n Simple_repeat Simple_repeat 1 32 0 369 269 147 61 chr2 18097904 18098250 -232589604 + L2 LINE L2 2031 2406 -908 404 293 24 24 chr2 18098902 18099025 -232588829 - L2 LINE L2 -1 3271 3149 464 335 126 5 chr2 18099157 18099363 -232588491 - MIR SINE MIR -29 233 3 1834 87 0 0 chr2 18099458 18099687 -232588167 + AluSg SINE Alu 1 229 -81 353 274 189 13 chr2 18100510 18100663 -232587191 - MIR SINE MIR -59 203 24 30 27 0 0 chr2 18101118 18101155 -232586699 + AT_rich Low_complexity Low_complexity 1 37 0 2634 33 3 0 chr2 18101206 18101511 -232586343 - AluY SINE Alu -5 306 1 332 279 29 19 chr2 18101956 18102060 -232585794 + MIR SINE MIR 124 228 -34 183 269 86 43 chr2 18102332 18102425 -232585429 + MIR SINE MIR 47 143 -119 33 73 0 0 chr2 18102535 18102603 -232585251 + AT_rich Low_complexity Low_complexity 1 68 0 381 279 103 7 chr2 18103737 18103873 -232583981 - MLT1J2 LTR MaLR -21 429 281 237 230 97 44 chr2 18103984 18104097 -232583757 - MLT1J1 LTR MaLR -323 123 5 1947 244 64 43 chr2 18104420 18105001 -232582853 - MLT1E LTR MaLR 0 593 1 235 275 33 11 chr2 18105264 18105355 -232582499 + MIR3 SINE MIR 74 166 -42 1084 235 155 13 chr2 18106542 18106830 -232581024 - MLT1D LTR MaLR 0 505 151 504 79 13 13 chr2 18106830 18106906 -232580948 + MADE1 DNA Mariner 1 76 -4 1084 235 155 13 chr2 18106906 18106991 -232580863 - MLT1D LTR MaLR -354 151 79 181 327 0 0 chr2 18107116 18107168 -232580686 - L2 LINE L2 -2 3270 3219 3831 150 37 23 chr2 18107172 18107873 -232579981 + MER50 LTR ERV1 1 711 -23 1143 318 52 33 chr2 18108506 18109312 -232578542 + L2 LINE L2 2489 3313 0 955 186 0 30 chr2 18109344 18109511 -232578343 - AluJo SINE Alu -26 286 125 285 128 0 0 chr2 18109511 18109558 -232578296 + (TA)n Simple_repeat Simple_repeat 2 48 0 701 189 8 8 chr2 18109558 18109685 -232578169 - AluJo SINE Alu -183 129 3 362 245 107 60 chr2 18110449 18110747 -232577107 - L1ME4a LINE L1 -224 5897 5586 25 95 0 0 chr2 18111023 18111097 -232576757 + AT_rich Low_complexity Low_complexity 1 74 0 21 36 0 0 chr2 18111288 18111316 -232576538 + AT_rich Low_complexity Low_complexity 1 28 0 446 326 71 55 chr2 18111316 18111751 -232576103 - L1MC/D LINE L1 -2046 5762 5321 254 382 61 0 chr2 18112012 18112143 -232575711 - L2 LINE L2 -459 2855 2717 1361 191 127 0 chr2 18114226 18114478 -232573376 - AluJb SINE Alu -17 285 2 731 246 107 9 chr2 18114481 18114783 -232573071 - MER57A LTR ERV1 -21 382 27 1367 221 39 22 chr2 18114814 18115171 -232572683 + MLT1A1 LTR MaLR 1 363 -2 232 217 17 75 chr2 18115193 18115313 -232572541 - MER104 DNA Tc2 -64 116 4 234 383 25 0 chr2 18115316 18115397 -232572457 - MIR SINE MIR -156 106 24 202 328 125 16 chr2 18116239 18116367 -232571487 + MIR3 SINE MIR 60 201 -7 216 316 22 73 chr2 18118194 18118330 -232569524 - L2 LINE L2 -3 3310 3182 566 345 98 24 chr2 18119332 18120117 -232567737 + L1MC4a LINE L1 4987 5756 -365 262 221 0 47 chr2 18120191 18120277 -232567577 + L1ME4a LINE L1 5935 6016 -105 30 69 0 0 chr2 18120296 18120354 -232567500 + AT_rich Low_complexity Low_complexity 1 58 0 197 208 0 19 chr2 18120430 18120483 -232567371 + GA-rich Low_complexity Low_complexity 1 52 0 1420 233 73 35 chr2 18120542 18121005 -232566849 - MER74B LTR ERVL -59 563 83 1844 128 0 28 chr2 18123171 18123460 -232564394 - L1PA16 LINE L1 -305 5861 5581 * 2999 178 21 4 chr2 18123458 18124330 -232563524 + L1PA16 LINE L1 4721 5603 -563 1744 188 6 3 chr2 18124322 18124651 -232563203 - L1MB1 LINE L1 -239 5950 5621 * 1111 157 26 0 chr2 18124651 18124836 -232563018 + L1MA10 LINE L1 6128 6323 -11 928 214 63 0 chr2 18124839 18125045 -232562809 - Charlie4 DNA MER1_type -1726 235 17 367 319 34 8 chr2 18125672 18125791 -232562063 + L2 LINE L2 3146 3267 -5 582 257 46 0 chr2 18125917 18126069 -232561785 + MIR SINE MIR 84 242 -20 1293 197 10 38 chr2 18126614 18126903 -232560951 + AluJo SINE Alu 1 281 -31 186 103 0 0 chr2 18126907 18126936 -232560918 + (TTG)n Simple_repeat Simple_repeat 2 30 0 248 328 32 64 chr2 18127950 18128075 -232559779 + MIR SINE MIR 3 124 -84 1154 262 38 65 chr2 18128075 18128552 -232559302 + LTR16B LTR ERVL 1 464 0 326 269 87 111 chr2 18128571 18128987 -232558867 + MLT1K LTR MaLR 16 421 -167 581 285 128 21 chr2 18132349 18132683 -232555171 - MLT1I LTR MaLR -19 390 15 255 276 0 23 chr2 18133613 18133700 -232554154 - MLT1I LTR MaLR -15 394 310 181 211 308 0 chr2 18133852 18133904 -232553950 - MIR SINE MIR -147 115 48 358 327 200 0 chr2 18134011 18134161 -232553693 - MER5A DNA MER1_type -1 188 9 21 0 0 0 chr2 18134285 18134306 -232553548 + AT_rich Low_complexity Low_complexity 1 21 0 24533 84 6 7 chr2 18134616 18138804 -232549050 - L1PA7 LINE L1 -1 6153 1970 801 203 98 19 chr2 18188804 18189129 -232498725 - MLT1E3 LTR MaLR -220 404 93 306 370 42 16 chr2 18189663 18189852 -232498002 + MIR SINE MIR 19 212 -50 472 270 17 35 chr2 18189909 18190083 -232497771 + MLT1H LTR MaLR 73 243 -306 2037 128 44 33 chr2 18190411 18190771 -232497083 - THE1B LTR MaLR 0 364 1 240 349 0 28 chr2 18191299 18191408 -232496446 + MIR SINE MIR 111 216 -46 496 265 153 0 chr2 18192464 18192653 -232495201 + MIR SINE MIR 30 247 -15 437 328 113 28 chr2 18193406 18193583 -232494271 + L2 LINE L2 3080 3271 -1 199 333 13 0 chr2 18193862 18193937 -232493917 + L2 LINE L2 2335 2410 -904 1511 274 113 29 chr2 18194334 18194741 -232493113 - L1MC4 LINE L1 -51 7991 7620 1946 144 34 7 chr2 18194741 18195033 -232492821 - AluJb SINE Alu -12 300 1 1511 274 113 29 chr2 18195033 18195787 -232492067 - L1MC4 LINE L1 -422 7620 6629 393 22 0 0 chr2 18195787 18195833 -232492021 + (CA)n Simple_repeat Simple_repeat 2 47 0 1511 274 113 29 chr2 18195833 18195918 -232491936 - L1MC4 LINE L1 -1413 6629 6553 186 111 56 0 chr2 18196405 18196441 -232491413 + L2 LINE L2 3234 3271 -1 311 305 182 5 chr2 18196614 18196801 -232491053 - MIR SINE MIR -11 251 32 2323 88 3 7 chr2 18197072 18197369 -232490485 + AluSx SINE Alu 1 296 -16 440 254 167 0 chr2 18197388 18197502 -232490352 - MIR3 SINE MIR -73 135 3 211 214 60 107 chr2 18197562 18197646 -232490208 - L2 LINE L2 -5 3308 3229 368 171 114 86 chr2 18198902 18199042 -232488812 - MIR SINE MIR -65 197 54 244 320 40 0 chr2 18200122 18200197 -232487657 + L2 LINE L2 3186 3263 -9 1605 307 95 40 chr2 18200241 18201137 -232486717 + L2 LINE L2 1925 2869 -445 784 130 29 120 chr2 18201613 18201821 -232486033 + MER53 DNA DNA 1 189 0 300 180 0 16 chr2 18202183 18202244 -232485610 - L1ME4a LINE L1 -4 6117 6058 274 216 49 39 chr2 18203790 18203892 -232483962 - MER69 DNA AcHobo -42 2484 2382 2077 171 18 5 chr2 18204294 18204674 -232483180 + MLT1B LTR MaLR 6 390 0 315 367 57 19 chr2 18205280 18205438 -232482416 + L2 LINE L2 3081 3244 -28 389 323 37 43 chr2 18205549 18205710 -232482144 - L2 LINE L2 -2 3270 3111 2742 158 8 11 chr2 18205866 18206334 -232481520 - MLT1C LTR MaLR 0 467 1 260 398 0 16 chr2 18206797 18206925 -232480929 + MER115 DNA AcHobo 158 283 -410 1587 220 40 118 chr2 18207237 18207838 -232480016 + MLT2B3 LTR ERVL 1 554 0 304 352 44 31 chr2 18208243 18208402 -232479452 + MER5A DNA MER1_type 29 189 0 1473 81 0 24 chr2 18208405 18208614 -232479240 - L1PA11 LINE L1 -2 6172 5969 1024 138 64 0 chr2 18208927 18209145 -232478709 + L1MA8 LINE L1 6057 6288 -3 551 230 81 6 chr2 18209589 18209750 -232478104 + MLT1B LTR MaLR 3 175 -215 9881 30 1 1 chr2 18209792 18211742 -232476112 - L1PA4 LINE L1 -8 6147 4197 880 210 20 0 chr2 18211816 18212011 -232475843 + MLT1B LTR MaLR 192 390 0 1149 232 16 0 chr2 18212094 18212340 -232475514 - MLT1E1 LTR MaLR 0 654 405 552 192 53 34 chr2 18212385 18212587 -232475267 - MLT1E1 LTR MaLR -394 260 1 407 344 75 0 chr2 18213304 18213464 -232474390 + L2 LINE L2 3100 3271 -1 2537 50 0 7 chr2 18214045 18214342 -232473512 - AluY SINE Alu -14 297 3 356 324 110 40 chr2 18215124 18215297 -232472557 - MIR3 SINE MIR -21 187 3 218 234 340 0 chr2 18215771 18215865 -232471989 - L2 LINE L2 -2 3270 3145 599 300 39 26 chr2 18216710 18216940 -232470914 - MIR SINE MIR -23 239 7 26 0 0 0 chr2 18216975 18217001 -232470853 + AT_rich Low_complexity Low_complexity 1 26 0 239 323 0 0 chr2 18217126 18217188 -232470666 + L3 LINE CR1 1511 1572 -5 421 288 14 7 chr2 18217362 18217498 -232470356 + MIR SINE MIR 31 144 -64 450 329 96 12 chr2 18217736 18217903 -232469951 - MIR3 SINE MIR -11 197 17 406 253 163 12 chr2 18218119 18218285 -232469569 + MIR SINE MIR 71 261 -1 686 176 8 8 chr2 18218886 18219046 -232468808 + AluJb SINE Alu 160 319 0 221 290 16 0 chr2 18219820 18219882 -232467972 + GA-rich Low_complexity Low_complexity 4 66 0 1797 173 84 11 chr2 18220671 18221040 -232466814 + MSTD LTR MaLR 1 396 0 283 328 86 8 chr2 18221169 18221297 -232466557 - L2 LINE L2 -3 3310 3173 312 354 42 14 chr2 18221306 18221450 -232466404 + MIR SINE MIR 45 192 -70 210 289 0 0 chr2 18221551 18221596 -232466258 + MIR SINE MIR 51 95 -167 383 83 17 0 chr2 18221620 18221680 -232466174 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 902 225 20 10 chr2 18221743 18221943 -232465911 - MER58A DNA MER1_type -18 206 5 185 284 23 34 chr2 18221961 18222049 -232465805 - L2 LINE L2 -86 3227 3141 23 33 0 0 chr2 18223032 18223062 -232464792 + AT_rich Low_complexity Low_complexity 1 30 0 189 175 0 0 chr2 18223084 18223124 -232464730 + (TA)n Simple_repeat Simple_repeat 1 40 0 478 287 25 13 chr2 18223142 18223299 -232464555 - MIR SINE MIR -72 190 32 2276 127 0 6 chr2 18223370 18223724 -232464130 - L1PB1 LINE L1 -1 6150 5799 847 245 148 30 chr2 18224347 18224779 -232463075 + L2 LINE L2 2831 3313 0 402 356 91 68 chr2 18225069 18225510 -232462344 - L2 LINE L2 0 3272 2822 2329 118 19 22 chr2 18225610 18225975 -232461879 + THE1B LTR MaLR 1 364 0 3925 84 61 77 chr2 18225975 18226667 -232461187 + THE1B-int LTR MaLR 1 681 -899 * 4299 131 35 6 chr2 18226664 18228058 -232459796 - L1PA11 LINE L1 -256 5918 4495 1148 141 4 70 chr2 18228090 18228207 -232459647 - L1PA12 LINE L1 -1547 6037 5945 2364 87 3 19 chr2 18228207 18228517 -232459337 - AluSg SINE Alu -5 305 1 1148 141 4 70 chr2 18228517 18228655 -232459199 - L1PA12 LINE L1 -1639 5945 5799 732 23 0 0 chr2 18228757 18228843 -232459011 + (TA)n Simple_repeat Simple_repeat 2 87 0 9154 203 14 16 chr2 18228857 18231060 -232456794 - L1PA12 LINE L1 -2763 4821 2622 2092 147 61 33 chr2 18231061 18231577 -232456277 + MLT2A2 LTR ERVL 1 554 0 6971 217 21 31 chr2 18231579 18231747 -232456107 - L1PA12 LINE L1 -4952 2632 2464 2488 54 0 7 chr2 18231747 18232045 -232455809 - AluY SINE Alu -15 296 1 6971 217 21 31 chr2 18232045 18233739 -232454115 - L1PA12 LINE L1 -5120 2464 1 492 242 42 81 chr2 18234876 18235161 -232452693 + L1M4 LINE L1 1525 1798 -4586 881 246 187 13 chr2 18235244 18235769 -232452085 + L1M4 LINE L1 2473 3088 -3294 195 161 32 32 chr2 18235774 18235836 -232452018 + GA-rich Low_complexity Low_complexity 3 64 0 681 235 85 54 chr2 18235837 18236190 -232451664 + L1M4 LINE L1 4929 5292 -1090 237 306 28 0 chr2 18236226 18236298 -232451556 - L2 LINE L2 -688 2626 2553 453 227 9 27 chr2 18236586 18236696 -232451158 + MIR SINE MIR 113 220 -42 972 163 0 7 chr2 18237276 18237429 -232450425 - FRAM SINE Alu -30 146 1 368 339 70 0 chr2 18238028 18238199 -232449655 - MIR SINE MIR -75 187 5 2394 80 0 3 chr2 18238910 18239212 -232448642 + AluY SINE Alu 1 301 -10 233 329 110 97 chr2 18239230 18239458 -232448396 - L2 LINE L2 -4 3268 3038 420 176 0 0 chr2 18239594 18239662 -232448192 + MIR SINE MIR 84 151 -111 246 231 96 96 chr2 18240126 18240230 -232447624 + MIR SINE MIR 138 241 -21 267 276 0 0 chr2 18242178 18242254 -232445600 + (TA)n Simple_repeat Simple_repeat 2 77 0 213 211 0 35 chr2 18243106 18243163 -232444691 + A-rich Low_complexity Low_complexity 6 60 0 266 253 67 27 chr2 18243297 18243372 -232444482 - L2 LINE L2 -8 3264 3187 422 271 46 20 chr2 18244273 18244424 -232443430 + MIR3 SINE MIR 30 184 -24 231 309 40 59 chr2 18245355 18245507 -232442347 + L2 LINE L2 3165 3313 0 183 184 0 0 chr2 18246051 18246089 -232441765 + (TG)n Simple_repeat Simple_repeat 1 38 0 2204 82 0 3 chr2 18246296 18246610 -232441244 + AluSg SINE Alu 1 313 0 28 0 0 0 chr2 18247249 18247277 -232440577 + AT_rich Low_complexity Low_complexity 1 28 0 206 382 53 0 chr2 18247635 18247711 -232440143 + L2 LINE L2 3132 3211 -61 431 325 133 21 chr2 18247890 18248124 -232439730 - MIR SINE MIR 0 262 3 314 257 0 14 chr2 18248936 18249006 -232438848 + MIR3 SINE MIR 117 185 -23 452 255 0 0 chr2 18249091 18249197 -232438657 + MIR SINE MIR 49 154 -108 1604 240 21 30 chr2 18249359 18249830 -232438024 - MLT1C LTR MaLR 0 467 1 237 196 36 0 chr2 18250938 18250994 -232436860 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 23 0 0 0 chr2 18251014 18251037 -232436817 + AT_rich Low_complexity Low_complexity 1 23 0 276 283 10 20 chr2 18251253 18251352 -232436502 + CT-rich Low_complexity Low_complexity 3 100 0 272 197 51 8 chr2 18251384 18251501 -232436353 + GA-rich Low_complexity Low_complexity 5 126 0 261 364 34 17 chr2 18251896 18252014 -232435840 + MIR3 SINE MIR 4 123 -85 2414 77 0 3 chr2 18253327 18253627 -232434227 + AluY SINE Alu 1 299 -12 185 81 0 54 chr2 18253816 18253853 -232434001 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 247 414 40 0 chr2 18253988 18254087 -232433767 - L2 LINE L2 -48 3224 3122 278 339 18 18 chr2 18254744 18254856 -232432998 + MIR SINE MIR 24 135 -73 363 121 0 0 chr2 18255065 18255123 -232432731 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 205 204 41 0 chr2 18256305 18256354 -232431500 + (TG)n Simple_repeat Simple_repeat 2 52 0 448 289 102 21 chr2 18257128 18257315 -232430539 + MIR SINE MIR 46 247 -15 342 289 183 0 chr2 18257553 18257788 -232430066 - HsTC2 DNA Tc2 -1010 888 611 2001 86 50 11 chr2 18258036 18258316 -232429538 - AluY SINE Alu -20 291 1 351 121 0 48 chr2 18258616 18258699 -232429155 + L1MA6 LINE L1 6220 6298 -2 2233 162 11 37 chr2 18258865 18259329 -232428525 - Tigger2 DNA MER2_type 0 2718 2267 326 194 15 0 chr2 18259313 18259380 -232428474 - Tigger2 DNA MER2_type -2649 69 2 * 335 299 37 9 chr2 18259575 18259682 -232428172 + MIR SINE MIR 32 141 -121 2311 111 30 25 chr2 18260332 18260694 -232427160 + THE1B LTR MaLR 1 364 0 6513 226 55 61 chr2 18262037 18263010 -232424844 - L1PB3 LINE L1 -2 7571 6594 1981 115 3 21 chr2 18263010 18263336 -232424518 - AluY SINE Alu 0 321 1 6513 226 55 61 chr2 18263336 18264967 -232422887 - L1PB3 LINE L1 -979 6594 4955 2234 37 0 0 chr2 18264967 18265239 -232422615 + L1PA4 LINE L1 5878 6149 -6 6513 226 55 61 chr2 18265239 18267615 -232420239 - L1PB3 LINE L1 -2618 4955 3628 2077 70 0 4 chr2 18267615 18267872 -232419982 - AluY SINE Alu -16 295 40 6513 226 55 61 chr2 18267872 18270778 -232417076 - L1PB3 LINE L1 -3945 3628 706 193 223 85 64 chr2 18270837 18270931 -232416923 + MIR SINE MIR 148 243 -19 24 67 0 0 chr2 18271327 18271372 -232416482 + AT_rich Low_complexity Low_complexity 1 45 0 272 328 95 53 chr2 18272182 18272371 -232415483 - MIR SINE MIR -16 246 50 2695 102 5 3 chr2 18272904 18273278 -232414576 + THE1C LTR MaLR 1 375 0 1393 280 170 61 chr2 18273744 18275267 -232412587 - L2 LINE L2 0 3313 1638 207 0 0 0 chr2 18276493 18276516 -232411338 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 18277155 18277176 -232410678 + AT_rich Low_complexity Low_complexity 1 21 0 260 274 186 0 chr2 18277914 18278027 -232409827 - MIR SINE MIR 0 262 129 2218 204 16 45 chr2 18278175 18278661 -232409193 + MER70A LTR ERVL 1 472 0 1899 118 7 3 chr2 18278843 18279131 -232408723 - AluSc SINE Alu 0 309 21 467 344 62 0 chr2 18279526 18279718 -232408136 + MIR SINE MIR 59 262 0 982 178 0 14 chr2 18280061 18280272 -232407582 + L1M4 LINE L1 5451 5657 -511 3222 214 32 10 chr2 18280280 18280976 -232406878 - L1PB3 LINE L1 -6845 720 10 242 256 98 0 chr2 18281658 18281740 -232406114 - MIR3 SINE MIR -10 198 109 233 352 132 0 chr2 18281759 18281850 -232406004 + L2 LINE L2 3146 3248 -24 216 300 0 0 chr2 18282252 18282302 -232405552 + (TG)n Simple_repeat Simple_repeat 2 51 0 487 179 74 99 chr2 18283112 18283274 -232404580 + Charlie8 DNA MER1_type 1 158 -2259 1255 231 141 53 chr2 18283382 18283814 -232404040 + MER21B LTR ERV1 12 481 -382 2072 184 88 7 chr2 18283815 18284493 -232403361 + L1MA9 LINE L1 4786 5506 -743 783 242 11 0 chr2 18284495 18284673 -232403181 + L1MA9 LINE L1 5599 5778 -534 213 39 0 0 chr2 18284684 18284710 -232403144 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 43423 44 4 1 chr2 18284710 18290849 -232397005 - L1PA4 LINE L1 0 6155 3 1373 167 53 111 chr2 18290863 18290879 -232396975 + L1MA9 LINE L1 5811 5826 -486 2107 101 21 3 chr2 18290879 18291167 -232396687 + AluSc SINE Alu 1 293 -16 1373 167 53 111 chr2 18291167 18291600 -232396254 + L1MA9 LINE L1 5826 6234 -78 705 198 12 17 chr2 18291561 18291733 -232396121 - L1M2 LINE L1 -582 5730 5560 * 30 59 0 0 chr2 18291849 18291900 -232395954 + AT_rich Low_complexity Low_complexity 1 51 0 996 239 46 31 chr2 18291923 18292183 -232395671 + MER21B LTR ERV1 472 735 -128 2552 193 52 4 chr2 18292186 18292684 -232395170 + Tigger7 DNA MER2_type 1 522 -211 497 202 11 0 chr2 18292684 18292773 -232395081 + Tigger7 DNA MER2_type 2398 2487 0 336 292 165 49 chr2 18293290 18293756 -232394098 - L1ME4a LINE L1 -77 6044 5525 414 238 102 20 chr2 18293820 18293967 -232393887 - MIR SINE MIR -50 212 54 204 366 54 9 chr2 18294003 18294115 -232393739 - MIR SINE MIR -73 135 19 213 121 0 0 chr2 18294189 18294222 -232393632 + (TG)n Simple_repeat Simple_repeat 2 34 0 3557 258 114 28 chr2 18296891 18298484 -232389370 + HAL1 LINE L1 84 1813 -694 2495 157 59 0 chr2 18298555 18298981 -232388873 - LTR47A LTR ERVL -1 451 1 445 277 158 32 chr2 18298982 18299260 -232388594 + MLT1J2 LTR MaLR 77 389 -61 1379 281 96 20 chr2 18299305 18299949 -232387905 + HAL1 LINE L1 1815 2507 0 2395 249 38 4 chr2 18301785 18302702 -232385152 - L1M LINE L1 -767 5379 2479 1777 208 102 71 chr2 18302702 18303309 -232384545 - MLT1E2 LTR MaLR 0 626 1 766 218 93 19 chr2 18303480 18303987 -232383867 - L1MDb LINE L1 -3667 2739 2200 7272 134 31 55 chr2 18303989 18305317 -232382537 - HSMAR2 DNA Mariner -1 1301 6 3322 231 55 20 chr2 18305320 18306748 -232381106 - L1MDb LINE L1 -4211 2195 716 254 33 0 0 chr2 18307122 18307152 -232380702 - THE1B LTR MaLR -2 362 333 2372 101 24 6 chr2 18307350 18307686 -232380168 - THE1B LTR MaLR -22 342 1 1497 171 111 62 chr2 18308143 18308581 -232379273 + LTR56 LTR ERV1 1 436 -1 411 304 0 0 chr2 18308600 18308712 -232379142 - L1MDb LINE L1 -6276 133 22 285 271 64 7 chr2 18308809 18308949 -232378905 - L1ME4a LINE L1 -13 6108 5961 1040 159 88 100 chr2 18309249 18309588 -232378266 + LTR49 LTR ERV1 3 337 -258 799 193 0 53 chr2 18309717 18309904 -232377950 - FRAM SINE Alu 0 176 1 267 31 0 0 chr2 18310632 18310664 -232377190 + (ATG)n Simple_repeat Simple_repeat 1 32 0 222 337 0 47 chr2 18312074 18312160 -232375694 - L2 LINE L2 0 3313 3232 258 299 85 60 chr2 18312452 18312653 -232375201 - L2 LINE L2 0 3272 3067 250 338 46 22 chr2 18313108 18313276 -232374578 - MIR SINE MIR -57 205 32 255 326 54 16 chr2 18313491 18313620 -232374234 + MIR SINE MIR 39 172 -90 251 122 20 0 chr2 18314177 18314226 -232373628 + (CA)n Simple_repeat Simple_repeat 1 50 0 351 243 0 0 chr2 18314768 18314838 -232373016 + L2 LINE L2 3200 3269 -44 366 350 11 28 chr2 18315558 18315735 -232372119 - L1ME4a LINE L1 -201 5920 5747 1403 143 5 0 chr2 18316187 18316411 -232371443 + L1MB3 LINE L1 5545 5769 -414 1706 171 35 9 chr2 18316449 18316789 -232371065 + L1MB3 LINE L1 5759 6107 -76 1578 96 14 0 chr2 18317225 18317445 -232370409 + MLT2A2 LTR ERVL 1 223 -230 622 71 0 0 chr2 18317445 18317530 -232370324 + MLT2A2 LTR ERVL 369 453 0 216 97 0 0 chr2 18318721 18318752 -232369102 + (TA)n Simple_repeat Simple_repeat 2 32 0 2170 134 0 0 chr2 18319072 18319370 -232368484 - AluSx SINE Alu -14 298 1 3817 143 68 52 chr2 18319580 18320394 -232367460 + L1MA9 LINE L1 5473 6299 -13 203 219 82 82 chr2 18320944 18321017 -232366837 + MIR SINE MIR 28 100 -162 22 35 0 0 chr2 18321286 18321315 -232366539 + AT_rich Low_complexity Low_complexity 1 29 0 357 281 28 40 chr2 18321994 18322245 -232365609 - HAL1b LINE L1 -79 2428 793 1801 163 52 0 chr2 18322288 18322576 -232365278 + AluSx SINE Alu 4 306 -6 1757 181 10 3 chr2 18322580 18322883 -232364971 + AluJb SINE Alu 1 305 -7 333 181 32 11 chr2 18322890 18322984 -232364870 + GA-rich Low_complexity Low_complexity 1 96 0 2062 150 12 0 chr2 18323020 18323353 -232364501 + MER1B DNA MER1_type 1 337 0 527 293 14 0 chr2 18323519 18323666 -232364188 + MIR SINE MIR 82 230 -32 1638 193 49 21 chr2 18324040 18324470 -232363384 - L1PB4 LINE L1 -824 5322 4881 4601 132 8 56 chr2 18324470 18325359 -232362495 + L1PB4 LINE L1 5308 6153 -3 311 310 11 0 chr2 18325736 18325823 -232362031 + L1M4b LINE L1 1360 1447 -5412 369 346 0 10 chr2 18326120 18326471 -232361383 + L1M4b LINE L1 1926 2278 -4679 13239 83 8 8 chr2 18326471 18328474 -232359380 + L1PA7 LINE L1 3532 5553 -601 8211 72 8 4 chr2 18328474 18329541 -232358313 + MER11C LTR ERVK 1 1071 0 13239 83 8 8 chr2 18329541 18330141 -232357713 + L1PA7 LINE L1 5552 6151 -3 369 346 0 10 chr2 18330141 18330268 -232357586 + L1M4b LINE L1 2278 2408 -4549 313 211 53 0 chr2 18330367 18330462 -232357392 + MLT1I LTR MaLR 304 403 -6 576 235 174 0 chr2 18330603 18330735 -232357119 - MER5A DNA MER1_type -6 183 29 1439 299 63 32 chr2 18331049 18332185 -232355669 - L1MEd LINE L1 -953 1537 268 1678 182 28 25 chr2 18332279 18332641 -232355213 + MLT1A1 LTR MaLR 1 363 -2 577 323 53 8 chr2 18334169 18334421 -232353433 + MIR SINE MIR 5 262 0 198 325 162 52 chr2 18336203 18336394 -232351460 - MIR SINE MIR -31 231 20 233 279 19 87 chr2 18336826 18336930 -232350924 + MIR3 SINE MIR 67 163 -45 206 274 0 107 chr2 18337001 18337085 -232350769 - L2 LINE L2 -5 3308 3234 285 209 60 0 chr2 18337164 18337231 -232350623 - MLT1I LTR MaLR -8 401 331 354 245 86 26 chr2 18337409 18337560 -232350294 - MLT1J2 LTR MaLR -290 160 1 820 176 6 42 chr2 18338005 18338170 -232349684 - FRAM SINE Alu -7 159 1 22 0 0 0 chr2 18338261 18338283 -232349571 + AT_rich Low_complexity Low_complexity 1 22 0 2571 219 22 2 chr2 18338292 18338882 -232348972 - L1ME1 LINE L1 -6 6160 5559 223 278 221 11 chr2 18339049 18339172 -232348682 + MIR SINE MIR 29 183 -65 * 581 273 118 46 chr2 18339171 18339409 -232348445 + MIR SINE MIR 8 262 0 2264 121 0 6 chr2 18339484 18339798 -232348056 + AluSx SINE Alu 1 312 0 664 227 8 0 chr2 18339934 18340062 -232347792 + FLAM_A SINE Alu 1 129 -4 438 254 0 0 chr2 18340638 18340756 -232347098 - L1MC4 LINE L1 -1 8041 7924 519 251 18 31 chr2 18340795 18341022 -232346832 - L1MC4 LINE L1 -128 7914 7691 663 258 99 44 chr2 18341031 18341290 -232346564 - L1MC4a LINE L1 -1279 6529 6235 1824 83 4 11 chr2 18341290 18341554 -232346300 - L1PA8 LINE L1 0 6172 5911 663 258 99 44 chr2 18341554 18341729 -232346125 - L1MC4a LINE L1 -1573 6235 6071 207 222 33 22 chr2 18342740 18342830 -232345024 + (TA)n Simple_repeat Simple_repeat 2 92 0 329 342 57 16 chr2 18443775 18443968 -232243886 - L2 LINE L2 -234 3038 2838 2173 178 73 9 chr2 18444385 18444824 -232243030 + MLT1C LTR MaLR 1 467 0 24 32 0 0 chr2 18445124 18445155 -232242699 + AT_rich Low_complexity Low_complexity 1 31 0 191 167 42 28 chr2 18445395 18445467 -232242387 + GA-rich Low_complexity Low_complexity 3 75 0 333 0 0 0 chr2 18447528 18447565 -232240289 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr2 18447665 18447693 -232240161 + AT_rich Low_complexity Low_complexity 1 28 0 777 154 27 58 chr2 18447903 18447930 -232239924 + L1MA7 LINE L1 6108 6134 -157 1796 158 0 17 chr2 18447930 18448228 -232239626 - AluJb SINE Alu -19 293 1 777 154 27 58 chr2 18448228 18448388 -232239466 + L1MA7 LINE L1 6134 6289 -2 22 0 0 0 chr2 18448602 18448624 -232239230 + AT_rich Low_complexity Low_complexity 1 22 0 2003 127 68 14 chr2 18448680 18449035 -232238819 + THE1C LTR MaLR 2 375 0 311 304 20 0 chr2 18451489 18451591 -232236263 - MLT1J2 LTR MaLR 0 450 347 215 313 31 0 chr2 18451594 18451658 -232236196 + (CATG)n Simple_repeat Simple_repeat 2 67 0 293 263 113 0 chr2 18451670 18451750 -232236104 - MLT1J1 LTR MaLR -117 329 241 507 228 52 15 chr2 18451751 18451887 -232235967 - MLT1J2 LTR MaLR -240 210 70 453 220 0 119 chr2 18452119 18452278 -232235576 - MIR SINE MIR -2 260 121 366 298 71 34 chr2 18452420 18453235 -232234619 - L1MEd LINE L1 -2920 3209 2365 783 166 0 190 chr2 18453280 18453564 -232234290 + L1M4 LINE L1 4868 5097 -1049 633 259 32 37 chr2 18453602 18453791 -232234063 + MER58A DNA MER1_type 34 221 -3 349 335 66 19 chr2 18453844 18454101 -232233753 - HAL1 LINE L1 -753 1754 1486 232 306 24 16 chr2 18454364 18454488 -232233366 - L1MEd LINE L1 -5129 990 866 276 303 28 62 chr2 18455775 18456099 -232231755 + HAL1 LINE L1 2001 2313 -194 436 252 9 9 chr2 18456276 18456391 -232231463 + L1PA16 LINE L1 6046 6160 -6 8246 84 2 0 chr2 18456398 18457519 -232230335 - L1P LINE L1 -1833 4313 3191 7057 62 0 0 chr2 18457520 18458620 -232229234 + L1PA7 LINE L1 5037 6148 -6 856 276 30 8 chr2 18458652 18458920 -232228934 - MER97b DNA MER1_type? -533 520 247 76 61 0 0 chr2 18458930 18459062 -232228792 + AT_rich Low_complexity Low_complexity 1 132 0 26 30 0 0 chr2 18459111 18459144 -232228710 + AT_rich Low_complexity Low_complexity 1 33 0 643 207 78 47 chr2 18459193 18459386 -232228468 - MER97c DNA MER1_type? -836 254 56 6861 157 24 9 chr2 18461475 18462687 -232225167 - Tigger3b DNA MER2_type -1 1230 1 200 282 186 16 chr2 18463271 18463395 -232224459 - MIR SINE MIR -53 209 65 317 306 22 0 chr2 18464567 18464747 -232223107 + L1ME4a LINE L1 5691 5874 -247 6745 65 2 4 chr2 18464760 18466041 -232221813 - L1PA7 LINE L1 0 6154 4865 6443 95 0 0 chr2 18466041 18466928 -232220926 + L1PA7 LINE L1 3976 4862 -1284 1154 283 16 10 chr2 18466976 18467284 -232220570 + HsTC2a DNA Tc2 10 319 -425 2819 255 41 18 chr2 18467286 18468259 -232219595 + L1M4 LINE L1 4044 5039 -1107 1847 188 33 0 chr2 18469592 18469928 -232217926 + MER7A DNA MER2_type 1 345 -1 21 0 0 0 chr2 18469963 18469984 -232217870 + AT_rich Low_complexity Low_complexity 1 21 0 219 36 0 0 chr2 18470110 18470138 -232217716 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2414 40 0 30 chr2 18470140 18470444 -232217410 - AluY SINE Alu -16 295 1 22 0 0 0 chr2 18470450 18470472 -232217382 + AT_rich Low_complexity Low_complexity 1 22 0 2308 69 0 3 chr2 18470518 18470809 -232217045 - AluY SINE Alu -21 290 1 26 30 0 0 chr2 18470817 18470850 -232217004 + AT_rich Low_complexity Low_complexity 1 33 0 2270 163 75 5 chr2 18472217 18472617 -232215237 - MSTA LTR MaLR 0 428 1 349 246 183 0 chr2 18472622 18472764 -232215090 - MIR SINE MIR -2 260 93 381 301 145 62 chr2 18472908 18473363 -232214491 - L1ME4a LINE L1 -56 6065 5573 26 0 0 0 chr2 18473741 18473767 -232214087 + AT_rich Low_complexity Low_complexity 1 26 0 32 0 0 0 chr2 18473903 18473935 -232213919 + AT_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr2 18474069 18474113 -232213741 + AT_rich Low_complexity Low_complexity 1 44 0 202 182 0 0 chr2 18474363 18474396 -232213458 + (TG)n Simple_repeat Simple_repeat 2 34 0 2551 52 7 0 chr2 18474973 18475278 -232212576 - AluY SINE Alu -4 307 1 22 56 0 0 chr2 18475493 18475529 -232212325 + AT_rich Low_complexity Low_complexity 1 36 0 27 65 0 26 chr2 18475615 18475637 -232212217 + AT_rich Low_complexity Low_complexity 1 22 -53 1493 96 36 0 chr2 18475637 18475856 -232211998 + L1PA10 LINE L1 5942 6168 0 27 65 0 26 chr2 18475856 18475910 -232211944 + AT_rich Low_complexity Low_complexity 22 75 0 2010 108 54 0 chr2 18476110 18476387 -232211467 + AluSg SINE Alu 1 292 -18 233 92 58 23 chr2 18476387 18476474 -232211380 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 241 306 52 43 chr2 18477151 18477475 -232210379 + L1MC4a LINE L1 5268 5594 -2214 372 328 34 60 chr2 18477498 18477733 -232210121 + L1MC4a LINE L1 5682 5910 -1898 2186 128 0 0 chr2 18477735 18478040 -232209814 - AluSq SINE Alu -8 305 1 28 71 0 0 chr2 18478262 18478318 -232209536 + AT_rich Low_complexity Low_complexity 1 56 0 282 206 0 0 chr2 18478630 18478698 -232209156 + (ATG)n Simple_repeat Simple_repeat 3 70 0 8132 138 24 15 chr2 18479248 18480643 -232207211 + Tigger1 DNA MER2_type 95 1501 -917 2302 140 3 0 chr2 18480643 18481022 -232206832 - Tigger1 DNA MER2_type -356 2062 1683 764 202 104 0 chr2 18481231 18481414 -232206440 - MER105 DNA DNA -1 203 2 264 282 10 10 chr2 18481451 18481554 -232206300 + MLT1L LTR MaLR 513 615 0 3111 236 66 34 chr2 18482162 18482867 -232204987 + L1ME1 LINE L1 4099 4780 -1386 1990 112 31 14 chr2 18482867 18482986 -232204868 + AluSc SINE Alu 1 116 -193 207 0 0 0 chr2 18482986 18483009 -232204845 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1990 112 31 14 chr2 18483009 18483175 -232204679 + AluSc SINE Alu 116 291 -18 3111 236 66 34 chr2 18483175 18484438 -232203416 + L1ME1 LINE L1 4780 6120 -46 180 158 0 0 chr2 18484903 18484941 -232202913 + (TA)n Simple_repeat Simple_repeat 2 39 0 288 0 0 0 chr2 18484943 18484975 -232202879 + (TC)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr2 18484974 18484999 -232202855 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 1392 183 28 41 chr2 18485535 18485913 -232201941 + MLT1C LTR MaLR 3 442 -25 742 239 144 1 chr2 18486284 18486587 -232201267 - MER57A LTR ERV1 -12 391 69 2360 99 7 0 chr2 18486589 18486893 -232200961 - AluSg SINE Alu -4 306 1 1500 93 13 49 chr2 18486893 18487118 -232200736 - AluSq SINE Alu -14 299 83 411 364 8 0 chr2 18487511 18487640 -232200214 - L2 LINE L2 0 3272 3143 1147 187 60 4 chr2 18488849 18489117 -232198737 + L1MC3 LINE L1 7476 7758 -27 1627 156 39 0 chr2 18490245 18490502 -232197352 - AluJb SINE Alu -45 267 1 10639 203 12 17 chr2 18490996 18494456 -232193398 + L1PB3 LINE L1 2712 6154 0 688 245 75 43 chr2 18494490 18494866 -232192988 + L1MC4 LINE L1 7654 8041 -1 417 287 161 31 chr2 18494933 18495288 -232192566 + L1ME4a LINE L1 5535 5935 -186 192 77 0 0 chr2 18495379 18495405 -232192449 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1060 154 0 6 chr2 18497904 18498066 -232189788 + FRAM SINE Alu 1 160 -16 2234 113 7 3 chr2 18499574 18499875 -232187979 - AluSq SINE Alu -11 302 1 183 205 0 0 chr2 18500112 18500151 -232187703 + CT-rich Low_complexity Low_complexity 2 40 0 213 311 16 0 chr2 18500866 18500927 -232186927 - MER91B DNA MER1_type -119 71 10 253 333 22 0 chr2 18500937 18501027 -232186827 - MIR3 SINE MIR -3 205 114 2311 84 0 0 chr2 18501221 18501508 -232186346 + AluSc SINE Alu 1 287 -22 441 286 70 60 chr2 18501828 18502013 -232185841 + MIR3 SINE MIR 13 199 -9 183 42 0 0 chr2 18502963 18502987 -232184867 + (GA)n Simple_repeat Simple_repeat 2 25 0 256 286 78 0 chr2 18503489 18503566 -232184288 + MIR3 SINE MIR 78 160 -48 410 218 96 102 chr2 18503568 18503765 -232184089 - MER102b DNA MER1_type -1 340 145 1039 229 175 16 chr2 18503775 18504163 -232183691 - MLT2B2 LTR ERVL -65 450 1 1508 234 58 42 chr2 18504185 18504667 -232183187 + MLT1E2 LTR MaLR 135 624 -2 227 251 6 75 chr2 18504979 18505085 -232182769 - MIR SINE MIR -52 156 88 264 248 30 69 chr2 18505209 18505310 -232182544 - MIR SINE MIR -102 160 64 202 283 0 17 chr2 18506162 18506222 -232181632 + L3 LINE CR1 1518 1576 -1 1035 257 84 42 chr2 18506590 18506956 -232180898 + MLT1E LTR MaLR 1 385 -208 401 63 21 179 chr2 18506956 18507020 -232180834 - MADE1 DNA Mariner 0 80 34 2381 72 0 3 chr2 18507020 18507311 -232180543 - AluY SINE Alu -11 300 11 401 63 21 179 chr2 18507311 18507341 -232180513 - MADE1 DNA Mariner -46 34 1 1035 257 84 42 chr2 18507341 18507559 -232180295 + MLT1E LTR MaLR 385 592 -1 250 326 138 0 chr2 18508225 18508363 -232179491 - MIR3 SINE MIR -19 189 33 237 313 9 18 chr2 18508973 18509085 -232178769 + GA-rich Low_complexity Low_complexity 5 115 0 220 302 24 63 chr2 18510324 18510450 -232177404 + MIR SINE MIR 61 181 -81 218 209 0 0 chr2 18510565 18510608 -232177246 + L2 LINE L2 3263 3305 -8 222 318 24 24 chr2 18511316 18511401 -232176453 + L2 LINE L2 2897 2981 -291 196 339 17 0 chr2 18511416 18511475 -232176379 + L2 LINE L2 3116 3175 -97 926 182 86 0 chr2 18511563 18511750 -232176104 + MER3 DNA MER1_type 7 209 0 312 160 0 0 chr2 18511707 18511757 -232176097 - MER3 DNA MER1_type -119 90 41 * 238 329 12 0 chr2 18512648 18512730 -232175124 - MIR SINE MIR -72 136 54 * 389 305 108 15 chr2 18512718 18512921 -232174933 - L3 LINE CR1 -925 652 431 223 356 91 30 chr2 18515591 18515723 -232172131 - MIR3 SINE MIR -63 145 6 259 219 19 38 chr2 18516441 18516546 -232171308 + (TA)n Simple_repeat Simple_repeat 2 104 0 205 346 79 64 chr2 18517199 18517479 -232170375 - L2 LINE L2 -53 3219 2936 427 316 120 44 chr2 18519364 18519589 -232168265 - MIR SINE MIR -13 249 8 335 253 33 22 chr2 18521226 18521317 -232166537 + MIR SINE MIR 49 140 -68 215 208 38 38 chr2 18521347 18521400 -232166454 - MER5A DNA MER1_type -74 115 63 269 260 0 13 chr2 18521695 18521772 -232166082 - MLT1J2 LTR MaLR -14 436 361 2276 99 0 13 chr2 18522044 18522358 -232165496 + AluY SINE Alu 1 310 -1 186 43 0 0 chr2 18523060 18523083 -232164771 + (GA)n Simple_repeat Simple_repeat 1 23 0 196 237 34 0 chr2 18523293 18523352 -232164502 - L2 LINE L2 -528 2786 2726 450 312 59 10 chr2 18523451 18523653 -232164201 + MLT1J LTR MaLR 3 214 -297 754 253 0 22 chr2 18523756 18523981 -232163873 - L1M4 LINE L1 -1239 4907 4688 409 231 49 107 chr2 18523983 18524226 -232163628 + MER112 DNA MER1_type 25 253 -7 324 307 49 19 chr2 18524542 18524714 -232163140 - MIR SINE MIR -55 207 30 557 194 34 27 chr2 18524879 18525040 -232162814 + MLT1J LTR MaLR 295 511 0 30084 103 16 22 chr2 18526747 18529293 -232158561 + L1PA7 LINE L1 5 2564 -3905 239 0 0 31 chr2 18529293 18529325 -232158529 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 30084 103 16 22 chr2 18529325 18533139 -232154715 + L1PA7 LINE L1 2564 6398 -71 203 61 30 0 chr2 18533139 18533172 -232154682 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 30084 103 16 22 chr2 18533172 18533183 -232154671 + L1PA7 LINE L1 6398 6408 -61 2269 108 23 0 chr2 18533183 18533489 -232154365 + AluSp SINE Alu 1 313 0 766 247 81 9 chr2 18533496 18533649 -232154205 - L1MD2 LINE L1 -55 6304 6129 * 300 53 0 0 chr2 18533649 18533687 -232154167 + (TG)n Simple_repeat Simple_repeat 2 39 0 766 247 81 9 chr2 18533687 18533756 -232154098 - L1MD2 LINE L1 -230 6129 6066 186 342 108 32 chr2 18534824 18534982 -232152872 + L2 LINE L2 2890 3059 -213 386 352 40 5 chr2 18535750 18535949 -232151905 - MIR SINE MIR -1 261 56 710 234 114 26 chr2 18538346 18538516 -232149338 - MIR SINE MIR -8 254 58 2130 161 72 15 chr2 18538516 18538919 -232148935 - MSTB LTR MaLR 0 426 1 710 234 114 26 chr2 18538919 18538975 -232148879 - MIR SINE MIR -204 58 8 313 301 59 65 chr2 18539029 18539215 -232148639 - L3 LINE CR1 -146 1431 1247 443 266 96 0 chr2 18539399 18539628 -232148226 + L1ME4a LINE L1 5675 5925 -196 372 197 239 0 chr2 18540104 18540221 -232147633 + MER53 DNA DNA 38 182 -7 2406 85 7 0 chr2 18540549 18540855 -232146999 + AluY SINE Alu 4 311 0 226 259 304 0 chr2 18541592 18541704 -232146150 - MIR SINE MIR -109 153 8 310 344 90 33 chr2 18541848 18542092 -232145762 - L2 LINE L2 -631 2683 2426 236 227 45 80 chr2 18544025 18544113 -232143741 - L2 LINE L2 0 3313 3229 872 338 83 28 chr2 18544325 18545000 -232142854 - L2 LINE L2 -376 2938 2227 194 233 0 23 chr2 18545298 18545341 -232142513 + L2 LINE L2 3222 3263 -9 292 247 0 12 chr2 18545385 18545466 -232142388 + L3 LINE CR1 1444 1523 -54 236 308 164 27 chr2 18545754 18545900 -232141954 + MIR3 SINE MIR 41 206 -2 233 265 91 83 chr2 18546036 18546168 -232141686 - MIR SINE MIR -109 153 21 263 279 0 0 chr2 18547067 18547135 -232140719 + HERVL LTR ERVL 4778 4845 -809 264 276 40 13 chr2 18547934 18548010 -232139844 + L2 LINE L2 3191 3268 -4 231 227 7 40 chr2 18548013 18548163 -232139691 + GA-rich Low_complexity Low_complexity 4 148 0 1026 142 0 17 chr2 18548315 18548603 -232139251 + (GGAA)n Simple_repeat Simple_repeat 4 284 0 398 355 33 0 chr2 18549616 18549768 -232138086 + MIR3 SINE MIR 29 185 -23 2310 97 3 0 chr2 18550461 18550761 -232137093 - AluSg SINE Alu -9 301 1 911 20 0 0 chr2 18550770 18550919 -232136935 - AluYb8 SINE Alu 0 336 188 471 135 0 0 chr2 18552320 18552394 -232135460 + LTR32 LTR ERVL 15 88 -383 1217 157 12 44 chr2 18552409 18552657 -232135197 + LTR32 LTR ERVL 232 471 0 500 353 45 0 chr2 18553208 18553409 -232134445 + MIR SINE MIR 50 259 -3 225 238 30 38 chr2 18554559 18554651 -232133203 - MIR SINE MIR -59 149 52 32 75 0 0 chr2 18554786 18554853 -232133001 + AT_rich Low_complexity Low_complexity 1 67 0 30 0 0 0 chr2 18555234 18555264 -232132590 + AT_rich Low_complexity Low_complexity 1 30 0 393 225 136 78 chr2 18555430 18555621 -232132233 - MIR SINE MIR -11 251 50 273 151 0 0 chr2 18558055 18558108 -232129746 + (CA)n Simple_repeat Simple_repeat 2 54 0 564 237 96 6 chr2 18558630 18558807 -232129047 - MER3 DNA MER1_type -2 207 15 252 296 38 75 chr2 18559531 18559690 -232128164 + MIR SINE MIR 54 206 -56 242 368 39 26 chr2 18560597 18560752 -232127102 + MIR SINE MIR 20 176 -86 215 319 0 0 chr2 18562165 18562237 -232125617 + L2 LINE L2 3242 3313 0 3092 188 79 17 chr2 18562521 18563302 -232124552 + L1MB2 LINE L1 5340 6169 -2 21 0 0 0 chr2 18563329 18563350 -232124504 + AT_rich Low_complexity Low_complexity 1 21 0 1931 142 25 0 chr2 18563575 18563872 -232123982 - AluSx SINE Alu 0 306 3 228 208 228 10 chr2 18563912 18564013 -232123841 - L1ME LINE L1 -425 5696 5574 35 0 0 0 chr2 18564402 18564437 -232123417 + AT_rich Low_complexity Low_complexity 1 35 0 547 256 71 50 chr2 18564660 18564898 -232122956 - MIR SINE MIR -18 244 2 686 291 14 38 chr2 18565522 18565732 -232122122 - MIR SINE MIR -45 217 13 194 103 0 26 chr2 18566456 18566495 -232121359 + (TAAAAA)n Simple_repeat Simple_repeat 4 41 0 687 196 78 7 chr2 18568331 18568484 -232119370 - MER96 DNA MER1_type? 0 175 12 272 389 51 5 chr2 18572954 18573170 -232114684 + L2 LINE L2 2631 2856 -458 405 313 17 0 chr2 18573304 18573419 -232114435 + L2 LINE L2 3143 3259 -13 330 304 50 44 chr2 18573442 18573623 -232114231 + L2 LINE L2 3118 3299 -14 646 254 85 10 chr2 18573747 18573948 -232113906 + MER58A DNA MER1_type 4 219 -5 352 306 25 0 chr2 18573960 18574081 -232113773 + MIR SINE MIR 138 261 -1 291 309 27 9 chr2 18574290 18574400 -232113454 - MIR SINE MIR -103 159 48 771 298 78 35 chr2 18574575 18575062 -232112792 + L1ME3 LINE L1 5369 5876 -286 23 0 0 0 chr2 18575353 18575376 -232112478 + AT_rich Low_complexity Low_complexity 1 23 0 193 430 37 9 chr2 18575395 18575502 -232112352 - L2 LINE L2 -22 3250 3141 468 0 0 0 chr2 18577238 18577290 -232110564 + (TG)n Simple_repeat Simple_repeat 2 53 0 748 298 25 44 chr2 18578988 18579304 -232108550 + L2 LINE L2 2991 3300 -13 438 211 26 9 chr2 18579325 18579439 -232108415 - MER97b DNA MER1_type? 0 1053 938 30 59 0 0 chr2 18579463 18579514 -232108340 + AT_rich Low_complexity Low_complexity 1 51 0 664 198 101 48 chr2 18579650 18579898 -232107956 - MER97b DNA MER1_type? -194 859 599 255 61 0 0 chr2 18579900 18579933 -232107921 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 6243 208 22 14 chr2 18579994 18581473 -232106381 + L1P LINE L1 3862 5352 -794 566 274 11 40 chr2 18681897 18682072 -232005782 - MER5B DNA MER1_type -8 170 1 190 242 0 91 chr2 18682655 18682721 -232005133 - L2 LINE L2 -3 3269 3210 308 224 71 59 chr2 18683300 18683385 -232004469 + MIR SINE MIR 75 160 -102 1166 196 5 27 chr2 18683757 18683812 -232004042 + MLT1D LTR MaLR 287 342 -163 2377 133 19 30 chr2 18683812 18684180 -232003674 + THE1B LTR MaLR 1 364 0 1166 196 5 27 chr2 18684180 18684348 -232003506 + MLT1D LTR MaLR 342 505 0 189 107 0 0 chr2 18684509 18684537 -232003317 + (TAA)n Simple_repeat Simple_repeat 3 30 0 284 173 25 25 chr2 18685327 18685408 -232002446 + (TA)n Simple_repeat Simple_repeat 2 82 0 4205 159 28 44 chr2 18685632 18686021 -232001833 - L1MC3 LINE L1 0 7785 7391 2472 181 24 2 chr2 18686021 18686440 -232001414 + MSTA LTR MaLR 1 428 0 4205 159 28 44 chr2 18686440 18686917 -232000937 - L1MC3 LINE L1 -394 7391 6954 4470 271 71 60 chr2 18688570 18690968 -231996886 + HAL1 LINE L1 47 2470 -37 583 279 153 13 chr2 18690982 18691211 -231996643 + MIR SINE MIR 2 262 0 206 302 48 0 chr2 18692017 18692080 -231995774 + MIR SINE MIR 60 125 -83 339 271 83 42 chr2 18692124 18692268 -231995586 - MIR3 SINE MIR -58 150 1 2355 106 116 64 chr2 18693103 18693510 -231994344 - MSTA LTR MaLR 0 428 1 290 289 158 26 chr2 18693863 18693977 -231993877 + L2 LINE L2 3134 3262 -10 254 258 16 0 chr2 18695419 18695481 -231992373 + MIR SINE MIR 69 131 -131 255 303 94 82 chr2 18695497 18696217 -231991637 - L2 LINE L2 -252 3020 2295 1261 216 149 11 chr2 18696217 18696565 -231991289 - MSTD LTR MaLR 0 396 1 276 303 49 42 chr2 18696581 18696723 -231991131 - L2 LINE L2 -1044 2270 2128 1658 237 169 4 chr2 18696952 18697467 -231990387 - L1MD3 LINE L1 0 7995 7396 304 149 0 184 chr2 18697467 18697554 -231990300 - MLT1F1 LTR MaLR -448 119 49 2222 123 53 39 chr2 18697979 18698338 -231989516 + THE1B LTR MaLR 1 364 0 364 331 51 0 chr2 18698593 18698750 -231989104 + MIR3 SINE MIR 1 165 -43 593 200 164 18 chr2 18702344 18702509 -231985345 - MER5A DNA MER1_type 0 189 1 333 0 0 0 chr2 18703340 18703377 -231984477 + (TG)n Simple_repeat Simple_repeat 1 37 0 1310 165 25 38 chr2 18703503 18703848 -231984006 - MER33 DNA MER1_type 0 324 6 219 253 51 51 chr2 18704465 18704544 -231983310 + L2 LINE L2 3235 3313 0 1812 66 0 0 chr2 18705432 18705658 -231982196 + L1PA8 LINE L1 5912 6137 -35 404 289 82 0 chr2 18705659 18705853 -231982001 - L1MEc LINE L1 -3637 2578 2369 1198 267 113 61 chr2 18705926 18706067 -231981787 - L1MEc LINE L1 -3951 2445 2313 1572 201 0 17 chr2 18706067 18706360 -231981494 - AluJo SINE Alu -8 304 17 1198 267 113 61 chr2 18706360 18706723 -231981131 - L1MEc LINE L1 -4083 2313 1970 3293 195 11 7 chr2 18706723 18707283 -231980571 - MER68 LTR ERV1 0 562 1 1198 267 113 61 chr2 18707283 18707771 -231980083 - L1MEc LINE L1 -4426 1970 1401 355 183 0 0 chr2 18707908 18707968 -231979886 + MER20 DNA MER1_type 160 219 0 293 283 132 43 chr2 18708006 18708377 -231979477 - L1MEc LINE L1 -5204 1192 789 245 259 56 19 chr2 18708918 18709026 -231978828 + MER65B LTR ERV1 1 112 -419 1849 115 80 3 chr2 18709432 18709720 -231978134 - AluSx SINE Alu -2 310 1 22 0 0 0 chr2 18710441 18710463 -231977391 + AT_rich Low_complexity Low_complexity 1 22 0 239 295 45 18 chr2 18711082 18711194 -231976660 + MIR3 SINE MIR 69 183 -25 1814 168 0 3 chr2 18712078 18712363 -231975491 + AluJb SINE Alu 5 288 -24 2167 140 71 10 chr2 18712460 18712853 -231975001 + MER31A LTR ERV1 63 479 -6 1977 142 3 36 chr2 18712859 18713189 -231974665 + MER1B DNA MER1_type 21 339 0 296 320 103 21 chr2 18713190 18713287 -231974567 - MIR SINE MIR -130 132 28 237 33 0 0 chr2 18713387 18713417 -231974437 + (CA)n Simple_repeat Simple_repeat 1 30 0 391 254 35 0 chr2 18714797 18714911 -231972943 - LTR33 LTR ERVL -5 516 399 1815 92 17 4 chr2 18714919 18715158 -231972696 + AluSp SINE Alu 1 242 -71 419 289 9 0 chr2 18715204 18715318 -231972536 - LTR33 LTR ERVL -304 217 103 289 336 65 0 chr2 18715412 18715519 -231972335 - MIR SINE MIR -72 190 77 1807 54 35 139 chr2 18716133 18716449 -231971405 - AluY SINE Alu 0 311 29 543 203 40 62 chr2 18716496 18716673 -231971181 + MER104 DNA Tc2 8 180 0 2077 170 5 61 chr2 18717462 18717873 -231969981 - MLT1B LTR MaLR -2 388 1 264 332 66 43 chr2 18718811 18719112 -231968742 + L2 LINE L2 2554 2861 -453 180 256 39 116 chr2 18719168 18719297 -231968557 - MER5A DNA MER1_type -35 154 36 1287 0 0 0 chr2 18720611 18720749 -231967105 - AluYa5/8 SINE Alu -8 303 166 886 276 181 43 chr2 18720922 18721429 -231966425 - MLT1G1 LTR MaLR -3 592 16 1238 274 97 54 chr2 18721429 18722127 -231965727 - HAL1 LINE L1 -1728 779 52 408 319 104 22 chr2 18722172 18722354 -231965500 - L3 LINE CR1 -374 1203 1007 250 300 117 17 chr2 18722581 18722701 -231965153 + MER5A DNA MER1_type 9 140 -49 484 283 177 32 chr2 18725598 18726005 -231961849 + L2 LINE L2 2835 3300 -13 269 214 80 107 chr2 18726596 18726708 -231961146 + MER58A DNA MER1_type 1 109 -115 228 329 40 13 chr2 18726756 18726832 -231961022 + MIR3 SINE MIR 6 83 -125 804 236 19 0 chr2 18726836 18726993 -231960861 + MER58A DNA MER1_type 40 199 -25 2662 114 7 42 chr2 18727308 18727712 -231960142 + MLT1B LTR MaLR 1 390 0 395 281 118 0 chr2 18729959 18730094 -231957760 + L2 LINE L2 3163 3313 0 2653 129 21 21 chr2 18730196 18730621 -231957233 - MSTC LTR MaLR 0 428 4 262 287 126 0 chr2 18731009 18731096 -231956758 - MIR SINE MIR -108 154 57 2243 106 3 7 chr2 18731421 18731724 -231956130 + AluSx SINE Alu 1 302 -10 814 175 83 70 chr2 18733638 18733952 -231953902 - L1MA10 LINE L1 0 6334 6017 5601 111 7 0 chr2 18734052 18735073 -231952781 - L1PA11 LINE L1 -100 6074 5049 545 304 54 38 chr2 18735264 18735504 -231952350 + L3 LINE CR1 1104 1347 -230 587 172 166 0 chr2 18735795 18735964 -231951890 + MER5C DNA MER1_type 128 324 0 27 29 0 0 chr2 18736100 18736134 -231951720 + AT_rich Low_complexity Low_complexity 1 34 0 710 311 43 48 chr2 18736201 18736596 -231951258 + L3 LINE CR1 1128 1520 -57 1766 133 4 8 chr2 18736824 18737079 -231950775 - AluSx SINE Alu -54 258 5 1787 109 0 0 chr2 18737080 18737345 -231950509 - L1P4 LINE L1 -484 5681 5417 1058 123 36 36 chr2 18737345 18737530 -231950324 + L1MA9 LINE L1 6118 6312 0 391 307 86 7 chr2 18737716 18737856 -231949998 - L2 LINE L2 0 3313 3163 270 81 0 0 chr2 18737876 18737913 -231949941 + (TG)n Simple_repeat Simple_repeat 1 37 0 232 215 0 31 chr2 18739390 18739455 -231948399 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 2551 174 47 40 chr2 18739637 18739718 -231948136 - L1MA9 LINE L1 0 6312 6233 207 0 0 0 chr2 18739718 18739741 -231948113 + (TA)n Simple_repeat Simple_repeat 2 24 0 2551 174 47 40 chr2 18739741 18740186 -231947668 - L1MA9 LINE L1 -79 6233 5779 338 0 24 0 chr2 18740186 18740228 -231947626 + (CA)n Simple_repeat Simple_repeat 1 43 0 2551 174 47 40 chr2 18740228 18740292 -231947562 - L1MA9 LINE L1 -533 5779 5717 218 353 111 30 chr2 18740335 18740703 -231947151 - L2 LINE L2 -559 2755 2358 464 230 236 6 chr2 18740714 18740875 -231946979 - MIR SINE MIR -1 261 64 227 278 103 31 chr2 18741153 18741250 -231946604 - L2 LINE L2 -13 3300 3197 836 210 106 0 chr2 18742928 18743133 -231944721 - MIR SINE MIR -3 259 35 188 331 143 19 chr2 18743496 18743650 -231944204 + MIR3 SINE MIR 36 208 0 1822 184 35 30 chr2 18743713 18744260 -231943594 - MLT2A2 LTR ERVL 0 554 1 237 346 98 45 chr2 18744652 18744785 -231943069 + MIR3 SINE MIR 21 160 -48 2109 93 61 0 chr2 18746212 18746492 -231941362 + AluY SINE Alu 1 297 -14 266 143 18 0 chr2 18746762 18746818 -231941036 + L1MA8 LINE L1 6232 6288 -3 25 51 0 0 chr2 18747135 18747174 -231940680 + AT_rich Low_complexity Low_complexity 1 39 0 2026 139 27 3 chr2 18747181 18747518 -231940336 - MER7A DNA MER2_type -1 345 3 279 247 0 0 chr2 18747858 18747931 -231939923 + (CATA)n Simple_repeat Simple_repeat 4 76 0 532 289 89 31 chr2 18748062 18748287 -231939567 + MIR SINE MIR 12 249 -13 218 240 98 32 chr2 18750571 18750686 -231937168 + MIR3 SINE MIR 1 122 -110 354 322 115 6 chr2 18752335 18752509 -231935345 - MIR SINE MIR -48 214 22 199 70 23 23 chr2 18752510 18752553 -231935301 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 28341 101 8 12 chr2 18752568 18753241 -231934613 - L1PA7 LINE L1 0 6154 5479 2242 86 0 30 chr2 18753241 18753543 -231934311 - AluY SINE Alu -18 293 1 28341 101 8 12 chr2 18753543 18758208 -231929646 - L1PA7 LINE L1 -675 5479 845 2301 100 0 0 chr2 18758212 18758511 -231929343 - AluY SINE Alu -12 299 1 188 330 60 20 chr2 18758782 18758882 -231928972 + L2 LINE L2 3150 3253 -19 266 221 116 47 chr2 18759484 18759570 -231928284 + L2 LINE L2 3162 3253 -19 1875 194 145 24 chr2 18759853 18760431 -231927423 + L1MC4 LINE L1 7376 8023 -19 576 274 114 13 chr2 18760484 18760721 -231927133 + MIR SINE MIR 2 262 0 363 323 75 10 chr2 18760784 18760985 -231926869 - MIR SINE MIR -11 251 38 342 305 114 96 chr2 18763046 18763318 -231924536 + L2 LINE L2 2993 3269 -3 237 108 0 0 chr2 18764618 18764655 -231923199 + (CA)n Simple_repeat Simple_repeat 1 37 0 249 211 0 0 chr2 18767123 18767180 -231920674 + (TG)n Simple_repeat Simple_repeat 2 58 0 216 0 0 0 chr2 18767430 18767454 -231920400 + (GA)n Simple_repeat Simple_repeat 2 25 0 885 115 15 0 chr2 18768732 18768862 -231918992 + AluSg/x SINE Alu 179 310 -2 236 192 0 58 chr2 18768896 18768948 -231918906 - MER81 DNA DNA -65 49 1 356 299 98 18 chr2 18769252 18769416 -231918438 + MIR SINE MIR 2 178 -84 2082 132 0 7 chr2 18769471 18769767 -231918087 + AluSc SINE Alu 1 294 -15 207 100 0 0 chr2 18771279 18771309 -231916545 + (TG)n Simple_repeat Simple_repeat 1 30 0 205 195 0 24 chr2 18771309 18771350 -231916504 + (CATA)n Simple_repeat Simple_repeat 1 40 0 180 111 0 0 chr2 18772682 18772709 -231915145 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 355 24 0 0 chr2 18773127 18773169 -231914685 - THE1B LTR MaLR 0 364 323 2862 50 3 8 chr2 18773220 18773580 -231914274 - L1PA7 LINE L1 -2 6152 5795 2279 91 9 26 chr2 18773726 18774067 -231913787 - THE1B LTR MaLR -29 335 1 283 219 84 67 chr2 18774274 18774393 -231913461 - MIR SINE MIR -130 132 12 695 256 12 12 chr2 18774523 18774691 -231913163 + MER5B DNA MER1_type 8 175 -3 210 298 18 0 chr2 18774720 18774777 -231913077 + MIR SINE MIR 24 81 -127 257 235 20 0 chr2 18775035 18775086 -231912768 + L2 LINE L2 3221 3272 0 308 299 130 13 chr2 18776271 18776425 -231911429 - MIR SINE MIR -4 258 87 314 206 58 90 chr2 18777419 18777574 -231910280 - L1M4 LINE L1 -3864 2282 2133 23 68 0 0 chr2 18778234 18778278 -231909576 + AT_rich Low_complexity Low_complexity 1 44 0 384 364 28 7 chr2 18778335 18778478 -231909376 + MER5A DNA MER1_type 43 188 -1 500 274 94 21 chr2 18778756 18778990 -231908864 + MIR SINE MIR 6 256 -6 366 271 172 0 chr2 18779886 18780008 -231907846 + MIR3 SINE MIR 4 146 -62 207 235 0 20 chr2 18780108 18780159 -231907695 + L2 LINE L2 3264 3313 0 378 303 46 13 chr2 18780194 18780346 -231907508 + L2 LINE L2 3116 3272 0 282 172 82 41 chr2 18780637 18780759 -231907095 - L1ME4a LINE L1 -2 6119 5993 369 231 102 9 chr2 18780766 18780874 -231906980 - HAL1b LINE L1 -251 1097 980 280 277 209 34 chr2 18781309 18781457 -231906397 - MIR SINE MIR -25 237 64 491 286 50 19 chr2 18781514 18781675 -231906179 - MIR3 SINE MIR -23 185 20 180 267 95 48 chr2 18783128 18783233 -231904621 + MIR3 SINE MIR 91 200 -8 184 277 21 0 chr2 18783252 18783299 -231904555 - L3 LINE CR1 -12 1565 1518 1010 241 93 59 chr2 18783303 18783830 -231904024 - MLT1H LTR MaLR -4 545 1 395 306 62 0 chr2 18785036 18785180 -231902674 - MIR3 SINE MIR -2 206 54 180 325 84 24 chr2 18787293 18787376 -231900478 - MIR SINE MIR -76 132 45 210 239 60 60 chr2 18787966 18788033 -231899821 - L2 LINE L2 -216 3056 2425 273 328 77 31 chr2 18788873 18789068 -231898786 + L2 LINE L2 2553 2756 -558 250 308 38 32 chr2 18789336 18789521 -231898333 + MLT1J2 LTR MaLR 265 450 0 564 236 40 80 chr2 18790092 18790342 -231897512 + MIR SINE MIR 4 243 -19 6598 104 125 54 chr2 18790345 18791539 -231896315 - MER52C LTR ERV1 0 1278 1 295 274 59 0 chr2 18791900 18792002 -231895852 - MIR3 SINE MIR -8 200 93 814 288 49 10 chr2 18792041 18792448 -231895406 + L1ME4a LINE L1 5518 5940 -181 1980 141 35 0 chr2 18792558 18792842 -231895012 - AluSx SINE Alu -18 294 1 590 271 66 11 chr2 18793070 18793251 -231894603 + MIR SINE MIR 20 210 -52 978 194 188 53 chr2 18793252 18793532 -231894322 - MSTC LTR MaLR 0 428 83 2775 96 3 5 chr2 18793532 18793908 -231893946 + THE1C LTR MaLR 1 375 0 978 194 188 53 chr2 18793908 18794004 -231893850 - MSTC LTR MaLR -345 83 1 201 226 0 0 chr2 18794588 18794641 -231893213 + (TA)n Simple_repeat Simple_repeat 2 54 0 285 217 15 13 chr2 18794797 18794871 -231892983 - MER5A DNA MER1_type -44 145 61 384 353 30 8 chr2 18795402 18795535 -231892319 - MIR SINE MIR -125 137 2 30 27 0 0 chr2 18797736 18797773 -231890081 + AT_rich Low_complexity Low_complexity 1 37 0 305 250 0 0 chr2 18799106 18799174 -231888680 + MIR SINE MIR 80 147 -115 251 313 94 23 chr2 18799464 18799592 -231888262 + L2 LINE L2 3136 3272 0 792 306 16 4 chr2 18799772 18800025 -231887829 - MIR SINE MIR -4 258 5 256 358 11 11 chr2 18800912 18801007 -231886847 - MIR SINE MIR -76 132 38 1288 197 10 33 chr2 18801187 18801486 -231886368 - L1MB7 LINE L1 -16 6168 5877 1196 136 90 3 chr2 18801491 18801792 -231886062 - L1PBa LINE L1 -4241 2622 2296 321 65 0 0 chr2 18801959 18802005 -231885849 - L1MB7 LINE L1 -262 5922 5877 * 10179 108 119 18 chr2 18801995 18803821 -231884033 - L1PBa LINE L1 -4219 2644 634 1157 138 10 0 chr2 18803821 18804017 -231883837 - L1PBa LINE L1 -6663 200 3 4693 245 55 26 chr2 18804030 18806486 -231881368 - L1M4 LINE L1 -2143 4239 1619 559 249 30 6 chr2 18806465 18806630 -231881224 - L1MB8 LINE L1 -6 6408 6240 * 1334 261 53 69 chr2 18806809 18807414 -231880440 + MLT1G LTR MaLR 1 590 0 807 203 31 6 chr2 18807416 18807579 -231880275 + MIR SINE MIR 87 253 -9 277 197 15 61 chr2 18808736 18808802 -231879052 + L2 LINE L2 3210 3272 0 293 363 73 50 chr2 18809320 18809848 -231878006 - L2 LINE L2 0 3272 2736 260 312 0 0 chr2 18811360 18811437 -231876417 + MIR SINE MIR 79 155 -107 189 154 0 0 chr2 18812134 18812173 -231875681 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 18813161 18813183 -231874671 + AT_rich Low_complexity Low_complexity 1 22 0 807 164 6 38 chr2 18813501 18813684 -231874170 - L1MA9 LINE L1 0 6312 6136 928 180 60 0 chr2 18813685 18813902 -231873952 - L1MA9 LINE L1 -484 5828 5599 180 0 0 0 chr2 18815221 18815241 -231872613 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 183 42 0 0 chr2 18815293 18815317 -231872537 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1034 330 102 45 chr2 18815323 18816343 -231871511 - L2 LINE L2 -13 3259 2175 375 149 0 0 chr2 18816486 18816560 -231871294 + (TG)n Simple_repeat Simple_repeat 2 75 0 285 314 57 9 chr2 18817969 18818074 -231869780 - L2 LINE L2 -25 3247 3138 4967 123 44 4 chr2 18818207 18819821 -231868033 - L1PA16 LINE L1 -2 6164 4531 450 324 80 27 chr2 18819935 18820160 -231867694 + L3 LINE CR1 1297 1533 -44 466 345 100 43 chr2 18821786 18822578 -231865276 - L2 LINE L2 -468 2846 2010 387 288 207 18 chr2 18822608 18823185 -231864669 + L2 LINE L2 2475 3142 -171 306 250 48 12 chr2 18823196 18823280 -231864574 - MIR SINE MIR -21 241 155 277 220 195 0 chr2 18823281 18823399 -231864455 - MLT2E LTR ERVL 0 628 488 366 289 35 28 chr2 18823492 18823634 -231864220 - MLT2E LTR ERVL -456 172 30 474 300 27 7 chr2 18823681 18823831 -231864023 - MIR SINE MIR -105 157 5 219 320 0 0 chr2 18823876 18823926 -231863928 + L2 LINE L2 3203 3252 -20 1021 158 0 6 chr2 18824058 18824241 -231863613 + L1PB1 LINE L1 3 184 -6679 * 13826 187 20 11 chr2 18824227 18825746 -231862108 + L1PB1 LINE L1 1894 3398 -3469 2163 139 3 0 chr2 18825746 18826056 -231861798 + AluSq SINE Alu 1 311 -2 13826 187 20 11 chr2 18826056 18829415 -231858439 + L1PB1 LINE L1 3398 6867 0 1261 253 41 41 chr2 18829785 18830365 -231857489 - L1ME3 LINE L1 -19 6143 5476 677 213 33 81 chr2 18830568 18830779 -231857075 - L1ME2 LINE L1 -8 6156 5956 185 296 19 0 chr2 18831388 18831442 -231856412 + MIR SINE MIR 85 139 -69 43212 38 27 1 chr2 18832372 18837641 -231850213 - L1P LINE L1 -743 5403 2 192 200 0 0 chr2 18837726 18837766 -231850088 + CT-rich Low_complexity Low_complexity 2 41 0 363 265 81 0 chr2 18838470 18838606 -231849248 + MIR SINE MIR 101 247 -15 1413 110 0 55 chr2 18839091 18839310 -231848544 + AluSq SINE Alu 1 207 -106 317 62 21 0 chr2 18839337 18839385 -231848469 + (TG)n Simple_repeat Simple_repeat 2 50 0 395 250 189 14 chr2 18839580 18839728 -231848126 - MIR SINE MIR -19 243 70 625 250 45 17 chr2 18840405 18840581 -231847273 - MIR SINE MIR -76 186 6 1377 223 63 17 chr2 18840769 18841119 -231846735 + MLT1A2 LTR MaLR 1 593 0 190 293 85 49 chr2 18841141 18841223 -231846631 + L2 LINE L2 3186 3270 -43 322 297 36 86 chr2 18841883 18842186 -231845668 - L3 LINE CR1 -45 1532 1245 272 246 72 0 chr2 18842246 18842315 -231845539 + MER91B DNA MER1_type 3 76 -114 204 324 183 23 chr2 18842393 18842612 -231845242 - L3 LINE CR1 -342 1235 982 269 373 65 0 chr2 18842777 18842930 -231844924 + L2 LINE L2 3104 3266 -6 2540 56 0 37 chr2 18846525 18846847 -231841007 - AluY SINE Alu -1 310 1 412 330 54 27 chr2 18847157 18847378 -231840476 + MIR SINE MIR 20 246 -16 2362 88 7 10 chr2 18847400 18847708 -231840146 - AluSp SINE Alu -6 307 1 186 43 0 0 chr2 18847822 18847845 -231840009 + (TG)n Simple_repeat Simple_repeat 2 24 0 208 277 62 27 chr2 18848587 18848699 -231839155 + MIR SINE MIR 73 188 -74 385 278 25 56 chr2 18848817 18848979 -231838875 - MIR3 SINE MIR -17 191 35 2436 268 96 18 chr2 18849594 18850839 -231837015 - L1MEc LINE L1 -1730 4485 3143 314 284 128 35 chr2 18850835 18850976 -231836878 - L1MEc LINE L1 -4719 1677 1524 * 803 333 25 11 chr2 18850987 18851347 -231836507 + HERVL LTR ERVL 3903 4267 -1387 556 279 60 60 chr2 18851564 18851833 -231836021 + LTR33 LTR ERVL 1 269 -252 303 291 47 0 chr2 18851915 18852001 -231835853 + LTR33 LTR ERVL 298 387 -134 359 238 0 49 chr2 18852195 18852317 -231835537 - MIR SINE MIR -28 234 119 775 256 74 9 chr2 18852418 18852648 -231835206 + MIR SINE MIR 7 251 -11 288 0 0 0 chr2 18854307 18854339 -231833515 + (TC)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr2 18854361 18854390 -231833464 + (GA)n Simple_repeat Simple_repeat 2 30 0 2121 113 3 36 chr2 18854434 18854743 -231833111 + AluSx SINE Alu 1 299 -13 324 0 0 0 chr2 18857163 18857199 -231830655 + (TG)n Simple_repeat Simple_repeat 2 37 0 5757 118 0 14 chr2 18857685 18859454 -231828400 - L1PA13 LINE L1 0 6163 4398 403 292 7 21 chr2 18861072 18861232 -231826622 + MIR SINE MIR 24 141 -67 965 137 0 7 chr2 18861547 18861700 -231826154 - L1MB1 LINE L1 -291 5898 5747 2036 151 19 35 chr2 18861700 18862070 -231825784 + L1MA9 LINE L1 5947 6312 0 182 340 111 30 chr2 18862230 18862374 -231825480 + L2 LINE L2 3032 3204 -109 15927 127 8 0 chr2 18862374 18863428 -231824426 + L1PA8 LINE L1 2954 3998 -2174 2369 85 0 38 chr2 18863428 18863747 -231824107 + AluY SINE Alu 1 307 -4 15927 127 8 0 chr2 18863747 18865921 -231821933 + L1PA8 LINE L1 3998 6167 -5 182 340 111 30 chr2 18865921 18866011 -231821843 + L2 LINE L2 3204 3285 -28 1728 165 3 26 chr2 18866748 18867051 -231820803 - AluJo SINE Alu -16 296 1 501 309 124 24 chr2 18867193 18867523 -231820331 - LTR33 LTR ERVL -57 464 102 237 341 38 15 chr2 18868372 18868504 -231819350 - MIR3 SINE MIR -15 193 59 835 321 21 0 chr2 18868906 18869149 -231818705 - MIR SINE MIR 0 262 15 934 169 27 126 chr2 18869285 18869546 -231818308 + L1PA15 LINE L1 5931 6165 0 485 242 44 50 chr2 18869947 18870129 -231817725 + MIR3 SINE MIR 16 196 -12 271 292 31 54 chr2 18870752 18870882 -231816972 - MIR SINE MIR -64 144 18 2100 161 8 40 chr2 18870927 18871281 -231816573 - MER61A LTR ERV1 0 343 1 525 276 63 23 chr2 18871731 18871905 -231815949 + MIR SINE MIR 2 182 -80 801 64 0 0 chr2 18871955 18872049 -231815805 + AluSc SINE Alu 2 95 -214 1388 105 21 0 chr2 18872188 18872378 -231815476 + AluSg/x SINE Alu 97 290 -20 237 146 24 61 chr2 18873263 18873299 -231814555 + (CATA)n Simple_repeat Simple_repeat 1 37 -388 2564 65 0 31 chr2 18873299 18873621 -231814233 + AluSq SINE Alu 1 312 -1 237 146 24 61 chr2 18873621 18873705 -231814149 + (CATA)n Simple_repeat Simple_repeat 37 425 0 5581 164 17 25 chr2 18873771 18875321 -231812533 - L1MA4 LINE L1 0 6300 4766 741 299 105 30 chr2 18875409 18876010 -231811844 - L1MC4a LINE L1 -1901 5907 5262 380 274 10 10 chr2 18876174 18876276 -231811578 - MER5A DNA MER1_type -79 110 9 570 267 83 24 chr2 18877103 18877345 -231810509 + MLT1J1 LTR MaLR 1 250 -200 236 306 83 0 chr2 18879048 18879156 -231808698 - L2 LINE L2 0 3313 3197 598 313 28 0 chr2 18881518 18881697 -231806157 + MIR SINE MIR 78 261 -1 3942 151 39 0 chr2 18881728 18882364 -231805490 - L1MC1 LINE L1 -1 6332 5672 7872 30 4 0 chr2 18882980 18884208 -231803646 - L1PA4 LINE L1 -4 6151 4917 2380 45 0 0 chr2 18884210 18884499 -231803355 + L1PA4 LINE L1 4605 4893 -1253 216 318 0 71 chr2 18884950 18885076 -231802778 + MIR3 SINE MIR 63 179 -29 6090 119 6 4 chr2 18885147 18886065 -231801789 - L1PB2 LINE L1 0 6151 5232 186 241 111 65 chr2 18886783 18886891 -231800963 - MIR SINE MIR -51 211 99 212 257 14 68 chr2 18887721 18887795 -231800059 - MIR SINE MIR -104 158 89 207 0 0 0 chr2 18888156 18888179 -231799675 + (T)n Simple_repeat Simple_repeat 1 23 0 226 237 26 26 chr2 18888396 18888472 -231799382 - L2 LINE L2 -4 3268 3193 6351 48 10 11 chr2 18888649 18889315 -231798539 - L1PA7 LINE L1 -2 6152 5486 2204 93 0 35 chr2 18889315 18889626 -231798228 - AluY SINE Alu -11 300 1 6351 48 10 11 chr2 18889626 18889748 -231798106 - L1PA7 LINE L1 -668 5486 5365 1125 92 30 0 chr2 18889746 18889910 -231797944 + L1PA7 LINE L1 5208 5376 -770 * 195 316 161 35 chr2 18890023 18890365 -231797489 - L2 LINE L2 -825 2489 2105 186 133 0 0 chr2 18891365 18891395 -231796459 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 305 214 29 57 chr2 18893417 18893487 -231794367 + MLT1K LTR MaLR 179 246 -342 509 265 174 10 chr2 18894216 18894412 -231793442 - MIR SINE MIR -25 237 10 26 0 0 0 chr2 18894419 18894445 -231793409 + AT_rich Low_complexity Low_complexity 1 26 0 404 169 0 26 chr2 18894901 18894978 -231792876 + L1MA6 LINE L1 6226 6300 0 25 0 0 0 chr2 18894994 18895019 -231792835 + AT_rich Low_complexity Low_complexity 1 25 0 357 285 97 21 chr2 18896279 18896423 -231791431 - MIR3 SINE MIR -13 195 41 2046 141 3 0 chr2 18897471 18897770 -231790084 + AluSx SINE Alu 1 300 -12 396 259 107 8 chr2 18897829 18897960 -231789894 - MLT1H LTR MaLR 0 549 406 180 0 0 0 chr2 18897991 18898011 -231789843 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 450 0 0 0 chr2 18898010 18898060 -231789794 + (TG)n Simple_repeat Simple_repeat 1 50 0 433 227 0 0 chr2 18898131 18898219 -231789635 - MLT1H LTR MaLR -381 168 81 1924 186 194 16 chr2 18899635 18900064 -231787790 - MLT1D LTR MaLR 0 505 1 432 190 5 9 chr2 18900195 18900302 -231787552 + L1MA9 LINE L1 6187 6291 0 2036 42 0 8 chr2 18901507 18901747 -231786107 + L1PA4 LINE L1 5917 6154 -1 510 220 62 14 chr2 18902629 18902784 -231785070 - MER5A DNA MER1_type -8 170 5 2144 129 0 25 chr2 18903198 18903516 -231784338 + AluSx SINE Alu 2 311 -1 218 327 45 36 chr2 18903699 18903809 -231784045 - L2 LINE L2 -4 3268 3158 298 252 157 34 chr2 18906571 18906718 -231781136 - MIR3 SINE MIR -4 204 40 486 49 0 0 chr2 18907261 18907322 -231780532 + (TG)n Simple_repeat Simple_repeat 1 61 0 183 345 103 9 chr2 18909164 18909280 -231778574 - L2 LINE L2 0 3272 3146 426 213 11 21 chr2 18909467 18909561 -231778293 + MER96 DNA MER1_type? 1 93 -82 255 262 145 14 chr2 18909592 18909737 -231778117 + MIR SINE MIR 98 261 -1 515 275 84 48 chr2 18909881 18910132 -231777722 + MIR SINE MIR 3 262 0 2190 116 17 0 chr2 18910385 18910686 -231777168 + AluSq SINE Alu 1 306 -7 31 68 0 0 chr2 18910712 18910771 -231777083 + AT_rich Low_complexity Low_complexity 1 59 0 647 136 19 39 chr2 18910793 18910896 -231776958 - FLAM_A SINE Alu -21 121 21 315 71 0 0 chr2 18911642 18911684 -231776170 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 2189 125 7 0 chr2 18912796 18913099 -231774755 - AluSx SINE Alu -7 305 1 373 234 65 19 chr2 18913269 18913376 -231774478 - MIR SINE MIR -148 114 3 602 307 120 26 chr2 18913601 18914093 -231773761 + L1ME4a LINE L1 5582 6119 -2 347 291 0 0 chr2 18915564 18915667 -231772187 + MIR SINE MIR 137 239 -23 208 344 16 0 chr2 18916834 18916898 -231770956 - L2 LINE L2 -82 3190 3126 309 283 133 9 chr2 18917737 18917850 -231770004 - MIR SINE MIR -14 248 122 384 281 82 15 chr2 18919782 18919917 -231767937 - MIR3 SINE MIR -34 174 31 21 36 0 0 chr2 18920286 18920314 -231767540 + AT_rich Low_complexity Low_complexity 1 28 0 540 179 47 0 chr2 18920376 18920482 -231767372 - MLT1H LTR MaLR -2 547 437 887 280 58 18 chr2 18920550 18920825 -231767029 - MLT1H LTR MaLR -252 297 12 453 279 7 14 chr2 18921577 18921717 -231766137 + MIR SINE MIR 118 256 -6 336 64 0 0 chr2 18922607 18922654 -231765200 + (CA)n Simple_repeat Simple_repeat 2 48 0 1983 269 30 31 chr2 18924089 18924666 -231763188 + MLT1E LTR MaLR 9 584 -9 993 226 34 64 chr2 18924667 18924711 -231763143 - MLT2C2 LTR ERVL 0 464 420 357 24 0 0 chr2 18924711 18924753 -231763101 + (CA)n Simple_repeat Simple_repeat 2 43 0 993 226 34 64 chr2 18924753 18925130 -231762724 - MLT2C2 LTR ERVL -44 420 1 210 37 0 0 chr2 18926186 18926213 -231761641 + (GA)n Simple_repeat Simple_repeat 2 28 0 2123 113 7 0 chr2 18927615 18927934 -231759920 + AluSq SINE Alu 2 313 0 696 277 30 20 chr2 18928185 18928387 -231759467 + MIR SINE MIR 49 252 -10 187 212 40 121 chr2 18929792 18929891 -231757963 - L2 LINE L2 -215 3057 2967 354 281 23 39 chr2 18930563 18930691 -231757163 - MIR SINE MIR -65 143 18 245 319 85 0 chr2 18930735 18930829 -231757025 - MIR SINE MIR -92 170 69 559 50 4 1 chr2 18930829 18930911 -231756943 - MSTA LTR MaLR 0 428 357 10455 40 4 1 chr2 18930911 18932253 -231755601 - L1PA5 LINE L1 -962 5184 3839 7594 29 5 1 chr2 18932253 18933214 -231754640 + L1PA5 LINE L1 5198 6154 0 1536 145 108 65 chr2 18933214 18933566 -231754288 - MSTA LTR MaLR -59 369 3 218 343 0 15 chr2 18933566 18933633 -231754221 - MIR SINE MIR -187 75 10 349 316 150 32 chr2 18933658 18933905 -231753949 + L3 LINE CR1 1290 1565 -12 25 31 0 0 chr2 18935004 18935036 -231752818 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 18935224 18935263 -231752591 + AT_rich Low_complexity Low_complexity 1 39 0 187 264 0 19 chr2 18935949 18936002 -231751852 - L2 LINE L2 -1 3312 3261 304 273 65 65 chr2 18936042 18936181 -231751673 + MIR SINE MIR 110 248 -14 1986 146 3 3 chr2 18936492 18936780 -231751074 - AluJb SINE Alu -6 306 19 356 333 0 90 chr2 18936877 18937078 -231750776 - L2 LINE L2 -1 3271 3089 233 318 39 39 chr2 18941898 18942027 -231745827 + MLT1L LTR MaLR 148 276 -339 31 44 0 0 chr2 18942440 18942485 -231745369 + AT_rich Low_complexity Low_complexity 1 45 0 4318 30 4 4 chr2 18942485 18943010 -231744844 - L1PA2 LINE L1 0 6155 5631 194 323 92 67 chr2 18943672 18943836 -231744018 - L2 LINE L2 -9 3304 3137 715 229 19 0 chr2 18943997 18944154 -231743700 + Tigger4(Zombi) DNA MER2_type 1 160 -2571 * 3077 125 12 14 chr2 18944152 18944663 -231743191 + Tigger4(Zombi) DNA MER2_type 2222 2731 0 2024 256 52 20 chr2 18944663 18945222 -231742632 - MLT1G1 LTR MaLR -16 579 3 4466 230 15 19 chr2 18945223 18946621 -231741233 - L1M4 LINE L1 -1947 4199 2807 324 326 35 18 chr2 18947332 18947468 -231740386 - MIR SINE MIR -57 151 11 21 36 0 0 chr2 18947813 18947841 -231740013 + AT_rich Low_complexity Low_complexity 1 28 0 656 298 78 81 chr2 18950352 18951044 -231736810 - L1M4 LINE L1 -1014 5132 4443 529 275 26 10 chr2 18951161 18951354 -231736500 - LTR33 LTR ERVL 0 521 326 322 211 53 0 chr2 18951537 18951613 -231736241 - LTR33 LTR ERVL -435 86 7 227 316 62 42 chr2 18951627 18951915 -231735939 - L1M4 LINE L1 -1868 4278 3985 27 49 0 0 chr2 18952046 18952087 -231735767 + AT_rich Low_complexity Low_complexity 1 41 0 276 362 47 24 chr2 18952422 18952549 -231735305 + L2 LINE L2 3184 3313 0 636 304 57 17 chr2 18953462 18953692 -231734162 - MIR SINE MIR -4 258 20 304 316 94 8 chr2 18953826 18953943 -231733911 + L2 LINE L2 3146 3272 0 225 0 0 0 chr2 18954086 18954111 -231733743 + (T)n Simple_repeat Simple_repeat 1 25 0 376 346 74 84 chr2 18956075 18956384 -231731470 - L2 LINE L2 0 3272 2967 3699 251 62 17 chr2 18956465 18957846 -231730008 + L1M4 LINE L1 2798 4240 -1906 1066 168 5 0 chr2 18957869 18958066 -231729788 + L1PB3 LINE L1 3 200 -6663 13185 163 59 26 chr2 18958066 18964086 -231723768 + L1PB3 LINE L1 634 6870 0 2634 153 30 32 chr2 18964164 18964732 -231723122 + L1MC2 LINE L1 5762 6328 -16 273 321 8 61 chr2 18964970 18965101 -231722753 + MIR3 SINE MIR 9 132 -76 1057 196 28 49 chr2 18965156 18965483 -231722371 + MER33 DNA MER1_type 1 320 -4 222 37 0 0 chr2 18966566 18966593 -231721261 + (CA)n Simple_repeat Simple_repeat 2 28 0 468 310 30 84 chr2 18966834 18967131 -231720723 + L2 LINE L2 2992 3272 0 21 0 0 0 chr2 18967989 18968010 -231719844 + AT_rich Low_complexity Low_complexity 1 21 0 189 286 20 0 chr2 18968320 18968369 -231719485 + MER5A DNA MER1_type 4 53 -136 292 316 187 0 chr2 18969345 18969500 -231718354 + MIR SINE MIR 36 219 -43 21 71 0 0 chr2 18970424 18970466 -231717388 + AT_rich Low_complexity Low_complexity 1 42 0 371 195 8 59 chr2 18970755 18970873 -231716981 - L1MA9 LINE L1 -38 6274 6163 537 209 17 28 chr2 18971784 18971921 -231715933 + MSTC LTR MaLR 1 134 -231 2822 92 97 0 chr2 18971921 18972293 -231715561 + MLT2A2 LTR ERVL 3 420 -33 249 33 0 0 chr2 18972293 18972323 -231715531 + (TA)n Simple_repeat Simple_repeat 2 31 0 2822 92 97 0 chr2 18972323 18972361 -231715493 + MLT2A2 LTR ERVL 420 453 0 537 209 17 28 chr2 18972361 18972380 -231715474 + MSTC LTR MaLR 134 152 -213 1332 122 4 4 chr2 18972380 18972610 -231715244 + L1MA4 LINE L1 5835 6064 -236 1447 194 8 0 chr2 18972623 18972875 -231714979 + AluJb SINE Alu 13 266 -46 240 35 0 0 chr2 18972881 18972910 -231714944 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1355 139 0 4 chr2 18972911 18973163 -231714691 + L1MA4 LINE L1 6050 6300 0 481 184 28 9 chr2 18973290 18973399 -231714455 + MSTC LTR MaLR 280 390 -6 517 290 101 53 chr2 18974557 18975143 -231712711 - L1ME3A LINE L1 -264 5906 5293 316 360 46 10 chr2 18975153 18975350 -231712504 - L1ME3A LINE L1 -876 5270 5067 20688 30 4 0 chr2 18975829 18979094 -231708760 - L1PA3 LINE L1 -3 6152 2878 17802 37 0 2 chr2 18979095 18981613 -231706241 + L1PA3 LINE L1 374 2884 -3262 4601 181 23 20 chr2 18981746 18983327 -231704527 + L1MA9 LINE L1 4696 6274 -38 188 269 134 60 chr2 18983842 18983976 -231703878 - L2 LINE L2 -160 3112 2969 403 336 16 55 chr2 18984821 18985187 -231702667 - MLT1I LTR MaLR -18 391 40 270 313 148 13 chr2 18985293 18985523 -231702331 + MIR SINE MIR 2 262 0 224 296 70 0 chr2 18985866 18985937 -231701917 + MIR SINE MIR 39 114 -94 421 208 0 50 chr2 18986451 18986610 -231701244 + L1M4 LINE L1 5176 5326 -820 311 232 37 46 chr2 18986675 18986833 -231701021 + L1MB1 LINE L1 5272 5436 -726 539 204 17 99 chr2 18986866 18986964 -231700890 + Tigger2 DNA MER2_type 2543 2621 -87 826 146 8 0 chr2 18986964 18987094 -231700760 + FLAM_C SINE Alu 3 133 0 539 204 17 99 chr2 18987094 18987176 -231700678 + Tigger2 DNA MER2_type 2621 2708 0 384 252 19 0 chr2 18987176 18987283 -231700571 + L1ME1 LINE L1 6053 6161 -5 1673 149 69 0 chr2 18987529 18987805 -231700049 - AluJb SINE Alu -12 300 6 6930 179 52 36 chr2 18987810 18989721 -231698133 - L1MC3 LINE L1 -743 5403 4941 307 227 60 60 chr2 18989730 18989880 -231697974 - L1M4 LINE L1 -812 5334 5185 378 300 52 70 chr2 18989977 18990360 -231697494 - L1M4 LINE L1 -978 5168 4793 2298 173 9 19 chr2 18990475 18990938 -231696916 + L1MB1 LINE L1 5559 6016 -152 2264 93 3 51 chr2 18990938 18991313 -231696541 + MER4A LTR ERV1 1 357 -307 1975 142 13 28 chr2 18991285 18991438 -231696416 + MER4A LTR ERV1 176 330 -334 * 2386 166 51 5 chr2 18991438 18991847 -231696007 + MSTA LTR MaLR 1 428 0 8924 175 22 19 chr2 18991847 18993493 -231694361 + MSTA-int LTR MaLR 1 1651 0 2552 128 54 7 chr2 18993493 18993900 -231693954 + MSTA LTR MaLR 1 426 -2 1975 142 13 28 chr2 18993900 18994129 -231693725 + MER4A LTR ERV1 327 664 0 500 142 228 0 chr2 18994129 18994256 -231693598 + L1MB1 LINE L1 6013 6168 0 353 273 143 33 chr2 18994275 18994473 -231693381 - L1M4 LINE L1 -1511 4635 4460 490 9 103 0 chr2 18994473 18994580 -231693274 + (TA)n Simple_repeat Simple_repeat 2 119 0 353 273 143 33 chr2 18994580 18994865 -231692989 - L1M4 LINE L1 -1686 4460 4099 1918 314 113 10 chr2 18995137 18995945 -231691909 - L2 LINE L2 -2389 925 35 315 208 0 83 chr2 18996326 18996422 -231691432 - L1P LINE L1 -2471 3675 3588 714 293 118 48 chr2 18996551 18997069 -231690785 - L1M4 LINE L1 -2644 3502 2949 276 97 39 48 chr2 18997254 18997357 -231690497 + (TA)n Simple_repeat Simple_repeat 2 103 0 196 263 137 11 chr2 18997729 18997824 -231690030 + MIR SINE MIR 124 230 -32 536 0 16 0 chr2 18997920 18997984 -231689870 + (ATATG)n Simple_repeat Simple_repeat 3 67 0 1846 133 105 12 chr2 18997987 18998319 -231689535 + THE1B LTR MaLR 2 364 0 1984 134 13 35 chr2 18998576 18998889 -231688965 - AluSx SINE Alu -6 306 1 423 0 0 0 chr2 19000725 19000772 -231687082 + (TG)n Simple_repeat Simple_repeat 1 47 0 2122 89 6 86 chr2 19003032 19003357 -231684497 - AluSc SINE Alu -10 299 1 362 281 21 0 chr2 19003448 19003544 -231684310 - L1MC4 LINE L1 -1339 6703 6606 305 211 119 9 chr2 19004040 19004149 -231683705 + MER103 DNA DNA 46 166 0 24 0 0 0 chr2 19004312 19004336 -231683518 + AT_rich Low_complexity Low_complexity 1 24 0 288 53 0 0 chr2 19004404 19004442 -231683412 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 486 312 39 13 chr2 19005259 19005413 -231682441 - MIR SINE MIR -98 164 7 529 266 60 64 chr2 19006102 19006163 -231681691 + MIR SINE MIR 12 72 -190 1817 156 0 33 chr2 19006163 19006465 -231681389 - AluSx SINE Alu -20 292 1 529 266 60 64 chr2 19006465 19006621 -231681233 + MIR SINE MIR 72 228 -34 400 280 92 19 chr2 19007255 19007488 -231680366 - L1MC4 LINE L1 -786 5360 5189 383 282 123 43 chr2 19007721 19007940 -231679914 - L1M4 LINE L1 -3201 2945 2690 2566 218 30 32 chr2 19007940 19008565 -231679289 - MLT1E3 LTR MaLR 0 624 1 383 282 123 43 chr2 19008565 19008671 -231679183 - L1M4 LINE L1 -3456 2690 2594 235 111 19 19 chr2 19008809 19008863 -231678991 + (TA)n Simple_repeat Simple_repeat 2 55 0 214 191 24 0 chr2 19009083 19009125 -231678729 + CT-rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 19009142 19009163 -231678691 + (CA)n Simple_repeat Simple_repeat 2 22 0 244 284 84 21 chr2 19009254 19009349 -231678505 + L2 LINE L2 3211 3311 -2 31 44 0 0 chr2 19009449 19009494 -231678360 + AT_rich Low_complexity Low_complexity 1 45 0 580 261 27 49 chr2 19009524 19009708 -231678146 + L2 LINE L2 2564 2743 -571 225 290 16 0 chr2 19009741 19009803 -231678051 - MER94 DNA DNA -2 132 70 187 360 41 29 chr2 19010756 19010928 -231676926 - L2 LINE L2 -173 3099 2926 296 377 33 25 chr2 19011447 19011569 -231676285 + MIR3 SINE MIR 3 125 -83 381 22 0 0 chr2 19012482 19012528 -231675326 + (TG)n Simple_repeat Simple_repeat 1 46 0 456 67 0 0 chr2 19012763 19012823 -231675031 + (CA)n Simple_repeat Simple_repeat 2 61 0 667 173 53 0 chr2 19014316 19014466 -231673388 - L1MA8 LINE L1 -2 6289 6132 207 418 28 14 chr2 19016227 19016368 -231671486 + L2 LINE L2 3128 3270 -2 249 83 0 0 chr2 19017678 19017714 -231670140 + (TC)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr2 19018064 19018092 -231669762 + AT_rich Low_complexity Low_complexity 1 28 0 236 320 53 0 chr2 19018401 19018476 -231669378 - MIR3 SINE MIR -19 189 111 842 152 71 49 chr2 19018479 19018663 -231669191 + MLT1D LTR MaLR 1 188 -317 369 331 51 0 chr2 19020371 19020528 -231667326 - MIR3 SINE MIR -43 165 1 2051 123 53 39 chr2 19020783 19021142 -231666712 - THE1B LTR MaLR 0 364 1 271 149 0 184 chr2 19021567 19021654 -231666200 + MLT1F1 LTR MaLR 49 119 -448 1418 237 169 4 chr2 19021654 19022169 -231665685 + L1MD3 LINE L1 7396 7995 0 274 311 66 42 chr2 19022373 19022540 -231665314 + L2 LINE L2 2100 2270 -1044 1109 218 146 11 chr2 19022556 19022905 -231664949 + MSTD LTR MaLR 1 396 0 279 307 93 80 chr2 19022905 19023641 -231664213 + L2 LINE L2 2295 3037 -235 250 258 16 0 chr2 19023641 19023703 -231664151 - MIR SINE MIR -131 131 69 292 289 158 26 chr2 19025145 19025259 -231662595 - L2 LINE L2 -10 3262 3134 2173 106 116 64 chr2 19025612 19026019 -231661835 + MSTA LTR MaLR 1 428 0 344 271 83 42 chr2 19026855 19026999 -231660855 + MIR3 SINE MIR 1 150 -58 209 302 48 0 chr2 19027043 19027106 -231660748 - MIR SINE MIR -83 125 60 594 279 153 13 chr2 19027913 19028142 -231659712 - MIR SINE MIR 0 262 2 3586 273 70 60 chr2 19028156 19030555 -231657299 - HAL1 LINE L1 -37 2470 47 4059 159 28 44 chr2 19032208 19032685 -231655169 + L1MC3 LINE L1 6954 7391 -394 2279 181 24 2 chr2 19032685 19033104 -231654750 - MSTA LTR MaLR 0 428 1 4059 159 28 44 chr2 19033104 19033493 -231654361 + L1MC3 LINE L1 7391 7785 0 284 173 25 25 chr2 19033717 19033798 -231654056 + (TA)n Simple_repeat Simple_repeat 2 82 0 189 107 0 0 chr2 19034588 19034616 -231653238 + (TTA)n Simple_repeat Simple_repeat 3 30 0 1138 196 5 27 chr2 19034777 19034945 -231652909 - MLT1D LTR MaLR 0 505 342 2202 133 19 30 chr2 19034945 19035313 -231652541 - THE1B LTR MaLR 0 364 1 1138 196 5 27 chr2 19035313 19035368 -231652486 - MLT1D LTR MaLR -163 342 287 308 281 94 0 chr2 19035740 19035836 -231652018 - MIR SINE MIR -102 160 56 191 242 0 91 chr2 19036405 19036471 -231651383 + L2 LINE L2 3210 3269 -3 567 274 11 40 chr2 19037054 19037229 -231650625 + MER5B DNA MER1_type 1 170 -8 850 187 22 0 chr2 19037780 19037919 -231649935 - MER5A DNA MER1_type -47 142 1 2109 92 0 25 chr2 19038035 19038317 -231649537 - AluSx SINE Alu -1 311 37 1998 118 45 0 chr2 19039548 19039835 -231648019 + AluSx SINE Alu 1 300 -12 25 51 0 0 chr2 19040101 19040140 -231647714 + AT_rich Low_complexity Low_complexity 1 39 0 913 290 50 30 chr2 19042312 19043046 -231644808 + L1MDb LINE L1 1117 2008 -4579 22 35 0 0 chr2 19043190 19043219 -231644635 + AT_rich Low_complexity Low_complexity 1 29 0 929 169 0 0 chr2 19043565 19043707 -231644147 + AluSg/x SINE Alu 135 276 -34 225 0 0 0 chr2 19043709 19043734 -231644120 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1070 269 18 66 chr2 19043734 19044291 -231643563 + L1MDb LINE L1 2553 3082 -3324 634 200 64 0 chr2 19044293 19044418 -231643436 + FLAM_C SINE Alu 3 135 -8 1220 279 84 25 chr2 19044420 19045174 -231642680 + L1MDb LINE L1 3070 3867 -2539 2135 258 81 30 chr2 19045488 19046447 -231641407 + L1MDb LINE L1 3916 4923 -1483 973 142 74 16 chr2 19046465 19046655 -231641199 - L1MC3 LINE L1 0 7785 7585 471 266 19 44 chr2 19046669 19046827 -231641027 + L1MDb LINE L1 4965 5118 -1288 317 250 83 45 chr2 19047070 19047202 -231640652 - L1MEd LINE L1 -1333 1157 967 416 339 44 39 chr2 19047641 19048004 -231639850 + L1MEc LINE L1 34 398 -5998 1683 208 34 12 chr2 19048004 19048356 -231639498 - MLT1A1 LTR MaLR 0 365 4 330 250 0 37 chr2 19048452 19048560 -231639294 + L1MEc LINE L1 462 565 -5831 241 302 146 19 chr2 19048949 19049154 -231638700 + MIR SINE MIR 32 262 0 201 208 38 19 chr2 19049181 19049234 -231638620 + L2 LINE L2 3205 3258 -14 228 330 21 0 chr2 19049283 19049377 -231638477 + MIR SINE MIR 37 132 -76 29 0 0 0 chr2 19050409 19050438 -231637416 + AT_rich Low_complexity Low_complexity 1 29 0 675 111 52 31 chr2 19050542 19050854 -231637000 + GA-rich Low_complexity Low_complexity 1 318 0 515 292 90 35 chr2 19051681 19052192 -231635662 + L1M4 LINE L1 3417 3955 -2191 371 283 105 55 chr2 19052426 19052714 -231635140 - L1MDa LINE L1 -1527 4553 4281 1490 206 25 55 chr2 19052714 19053078 -231634776 - MLT1B LTR MaLR -4 386 33 231 36 0 0 chr2 19053078 19053106 -231634748 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1490 206 25 55 chr2 19053106 19053139 -231634715 - MLT1B LTR MaLR -357 33 1 371 283 105 55 chr2 19053139 19053376 -231634478 - L1MDa LINE L1 -1799 4281 4002 2681 33 0 0 chr2 19053535 19053836 -231634018 + AluY SINE Alu 1 301 -10 276 270 0 0 chr2 19055123 19055197 -231632657 - L1MDa LINE L1 -2193 3887 3814 354 289 80 47 chr2 19055233 19055447 -231632407 - L1MDa LINE L1 -2826 3254 3049 7535 34 0 0 chr2 19055447 19056687 -231631167 - L1PA4 LINE L1 -1 6154 4915 354 289 80 47 chr2 19056687 19057200 -231630654 - L1MDa LINE L1 -3031 3049 2503 386 245 39 0 chr2 19057249 19057351 -231630503 - L1MDa LINE L1 -4840 1240 1135 1208 201 62 45 chr2 19057359 19057778 -231630076 - L1MDa LINE L1 -5014 1056 631 230 225 0 38 chr2 19058529 19058609 -231629245 + L1MC5 LINE L1 7831 7907 -54 22 0 0 0 chr2 19058615 19058637 -231629217 + AT_rich Low_complexity Low_complexity 1 22 0 293 199 99 153 chr2 19058704 19058835 -231629019 + MIR SINE MIR 7 130 -132 269 269 15 0 chr2 19058836 19058903 -231628951 + CT-rich Low_complexity Low_complexity 3 70 0 263 306 30 97 chr2 19059255 19059302 -231628552 + L2 LINE L2 3134 3183 -89 1882 159 3 13 chr2 19059302 19059610 -231628244 + AluJo SINE Alu 1 305 -7 263 306 30 97 chr2 19059610 19059696 -231628158 + L2 LINE L2 3183 3258 -14 186 309 49 81 chr2 19059702 19059825 -231628029 + MIR SINE MIR 110 228 -34 1954 118 48 3 chr2 19060019 19060308 -231627546 - AluSg SINE Alu -8 302 1 2458 78 3 0 chr2 19060630 19060939 -231626915 + AluY SINE Alu 1 310 -1 1172 189 9 30 chr2 19062273 19062506 -231625348 - AluJo SINE Alu -3 309 82 32 0 0 0 chr2 19065147 19065179 -231622675 + AT_rich Low_complexity Low_complexity 1 32 0 463 323 31 31 chr2 19065272 19065467 -231622387 - MIR SINE MIR -66 196 2 1914 201 31 72 chr2 19065548 19066035 -231621819 + MLT1D LTR MaLR 3 469 -36 273 302 52 48 chr2 19066476 19066939 -231620915 + L1M4 LINE L1 4390 4854 -1292 337 301 26 21 chr2 19067029 19067222 -231620632 + L1M4 LINE L1 4860 5053 -1093 21 36 0 0 chr2 19067333 19067361 -231620493 + AT_rich Low_complexity Low_complexity 1 28 0 307 324 46 83 chr2 19067431 19067672 -231620182 - HAL1b LINE L1 -1005 343 112 32 43 0 0 chr2 19068649 19068695 -231619159 + AT_rich Low_complexity Low_complexity 1 46 0 396 284 67 120 chr2 19069016 19069524 -231618330 + LTR67 LTR ERVL 36 516 -41 716 155 20 147 chr2 19069737 19069989 -231617865 + L1MB8 LINE L1 5901 6120 -58 4937 94 12 1 chr2 19070004 19070696 -231617158 - L1PA13 LINE L1 -23 6140 5442 702 112 105 21 chr2 19070724 19070867 -231616987 + MER53 DNA DNA 35 189 0 592 241 21 7 chr2 19071323 19071464 -231616390 - MLT1G1 LTR MaLR -447 148 6 313 254 80 51 chr2 19072120 19072396 -231615458 + L1MC/D LINE L1 4042 4325 -1821 315 359 41 38 chr2 19072493 19072783 -231615071 + L1MC/D LINE L1 4411 4701 -1445 307 348 59 23 chr2 19072865 19073086 -231614768 + L1MC/D LINE L1 4824 5052 -1094 1243 245 22 34 chr2 19073378 19073786 -231614068 + L1MC/D LINE L1 5265 5642 -2166 227 101 29 58 chr2 19075202 19075271 -231612583 + (TA)n Simple_repeat Simple_repeat 1 67 0 2290 111 0 0 chr2 19075653 19075960 -231611894 + AluSg SINE Alu 1 307 -3 21 36 0 0 chr2 19076194 19076222 -231611632 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr2 19076271 19076297 -231611557 + (TATAA)n Simple_repeat Simple_repeat 3 28 0 211 140 40 0 chr2 19076377 19076427 -231611427 + (ATATG)n Simple_repeat Simple_repeat 3 54 0 330 381 47 53 chr2 19076655 19076954 -231610900 + L1MEd LINE L1 274 570 -5549 43036 50 2 0 chr2 19076964 19083096 -231604758 + L1PA4 LINE L1 11 6154 -1 992 258 53 78 chr2 19083240 19083674 -231604180 + MLT2C2 LTR ERVL 1 423 -41 7277 134 54 17 chr2 19083675 19084880 -231602974 + HSMAR2 DNA Mariner 46 1295 -7 237 132 0 0 chr2 19084880 19084918 -231602936 + (CA)n Simple_repeat Simple_repeat 2 39 0 297 130 0 0 chr2 19084918 19084964 -231602890 + MLT2C2 LTR ERVL 465 510 -10 891 244 71 19 chr2 19085585 19086092 -231601762 + L1ME LINE L1 5003 5533 -631 1343 282 157 27 chr2 19086115 19086700 -231601154 + MLT2F LTR ERVL 1 661 -2 870 179 21 137 chr2 19086734 19086968 -231600886 + Zaphod DNA AcHobo 331 537 -3494 359 301 0 0 chr2 19087596 19087689 -231600165 + MIR3 SINE MIR 113 205 -3 407 301 92 12 chr2 19088691 19088864 -231598990 + MIR3 SINE MIR 15 201 -7 1830 231 90 27 chr2 19090848 19091337 -231596517 + MLT2B1 LTR ERVL 1 520 0 1354 167 40 117 chr2 19091822 19092217 -231595637 + MLT1A1 LTR MaLR 1 365 0 9055 206 10 26 chr2 19092217 19093976 -231593878 + MLT1A1-int LTR MaLR 1 1730 -5 275 77 0 26 chr2 19093982 19094021 -231593833 + MLT1A1 LTR MaLR 1 38 -327 212 128 0 43 chr2 19094022 19094069 -231593785 + (GGAGAA)n Simple_repeat Simple_repeat 6 50 0 589 283 120 77 chr2 19095050 19095400 -231592454 - L2 LINE L2 -10 3262 2898 656 241 54 49 chr2 19096343 19096719 -231591135 - LTR50 LTR ERVL 0 601 326 553 263 58 0 chr2 19096781 19096918 -231590936 - LTR50 LTR ERVL -650 145 1 387 297 35 43 chr2 19097065 19097263 -231590591 - MIR SINE MIR -44 218 19 295 257 99 20 chr2 19098667 19098768 -231589086 + MIR3 SINE MIR 93 201 -7 383 225 67 11 chr2 19099754 19099843 -231588011 - MER5A DNA MER1_type -92 97 4 416 321 48 30 chr2 19099854 19100019 -231587835 + MIR SINE MIR 18 185 -77 545 294 12 29 chr2 19101351 19101521 -231586333 + MER5A DNA MER1_type 2 168 -21 207 0 0 0 chr2 19103607 19103630 -231584224 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 225 94 0 0 chr2 19104437 19104469 -231583385 + (TG)n Simple_repeat Simple_repeat 2 33 0 229 200 0 75 chr2 19108324 19108404 -231579450 + G-rich Low_complexity Low_complexity 3 76 0 315 0 0 0 chr2 19112643 19112678 -231575176 + (TG)n Simple_repeat Simple_repeat 1 35 0 535 161 127 0 chr2 19114217 19114335 -231573519 + MER3 DNA MER1_type 77 209 0 203 158 0 26 chr2 19115234 19115272 -231572582 + C-rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 19115538 19115566 -231572288 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 19118736 19118758 -231569096 + (CCCCG)n Simple_repeat Simple_repeat 5 26 0 215 250 83 37 chr2 19119644 19119752 -231568102 + MIR SINE MIR 91 203 -59 1535 181 3 14 chr2 19120298 19120585 -231567269 - AluJb SINE Alu -28 284 1 3235 21 0 0 chr2 19121510 19121886 -231565968 + L1P LINE L1 4900 5275 -871 211 177 32 0 chr2 19121991 19122053 -231565801 + (TA)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr2 19122268 19122289 -231565565 + AT_rich Low_complexity Low_complexity 1 21 0 431 174 54 0 chr2 19122816 19122908 -231564946 - L1MDa LINE L1 -4865 1675 1579 461 289 134 16 chr2 19122996 19123384 -231564470 - L1MC4 LINE L1 -9 8033 7600 795 162 281 21 chr2 19123390 19123625 -231564229 - L1MD2 LINE L1 -3 6356 6061 6012 181 107 47 chr2 19123635 19124209 -231563645 - L1MDa LINE L1 -4244 2296 1758 2003 118 7 0 chr2 19124209 19124497 -231563357 - AluSq SINE Alu -23 290 1 6012 181 107 47 chr2 19124497 19125537 -231562317 - L1MDa LINE L1 -4782 1758 586 282 312 56 11 chr2 19126397 19126532 -231561322 + MIR SINE MIR 28 164 -63 410 294 40 22 chr2 19128106 19128315 -231559539 - MIR SINE MIR -4 258 2 652 306 89 28 chr2 19130432 19130651 -231557203 - L1ME4a LINE L1 0 6121 5917 1957 117 0 3 chr2 19130651 19130961 -231556893 + AluSx SINE Alu 1 309 0 652 306 89 28 chr2 19130961 19131057 -231556797 - L1ME4a LINE L1 -204 5917 5828 2015 207 83 43 chr2 19131057 19131657 -231556197 - MLT1E3 LTR MaLR 0 624 1 652 306 89 28 chr2 19131657 19131729 -231556125 - L1ME4a LINE L1 -293 5828 5706 262 234 108 18 chr2 19131732 19131843 -231556011 - L1P5 LINE L1 -702 5449 5329 469 241 125 0 chr2 19131921 19132033 -231555821 - FLAM_C SINE Alu -17 126 1 542 295 121 32 chr2 19132388 19132761 -231555093 - L1ME4a LINE L1 -1320 4826 4421 1309 238 65 12 chr2 19132786 19132882 -231554972 - L1MC4 LINE L1 -137 7905 7816 2243 123 0 7 chr2 19132882 19133192 -231554662 + AluSx SINE Alu 2 309 -3 1309 238 65 12 chr2 19133192 19133494 -231554360 - L1MC4 LINE L1 -226 7816 7486 721 286 43 18 chr2 19133547 19133802 -231554052 - MIR SINE MIR -1 261 2 201 263 26 40 chr2 19133888 19133964 -231553890 + MIR SINE MIR 59 133 -129 * 327 243 144 36 chr2 19133953 19134064 -231553790 - L2 LINE L2 0 3313 3191 297 304 74 0 chr2 19134068 19134203 -231553651 + MIR SINE MIR 117 261 -1 249 33 0 0 chr2 19135713 19135743 -231552111 + (TG)n Simple_repeat Simple_repeat 1 30 0 224 77 26 0 chr2 19135746 19135785 -231552069 + (TA)n Simple_repeat Simple_repeat 2 41 0 399 73 0 0 chr2 19136856 19136911 -231550943 + (TG)n Simple_repeat Simple_repeat 2 56 0 187 324 15 0 chr2 19137064 19137132 -231550722 + MIR SINE MIR 73 141 -121 22 80 0 0 chr2 19137132 19137182 -231550672 + AT_rich Low_complexity Low_complexity 1 50 0 256 277 92 59 chr2 19137182 19137301 -231550553 + MIR SINE MIR 140 262 0 281 254 17 0 chr2 19138280 19138339 -231549515 - L2 LINE L2 0 3272 3213 595 282 41 6 chr2 19138358 19138528 -231549326 + L2 LINE L2 2592 2767 -547 * 1039 301 82 10 chr2 19138522 19138904 -231548950 - L2 LINE L2 -724 2590 2178 543 56 37 19 chr2 19138904 19139011 -231548843 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 448 305 7 26 chr2 19139040 19139191 -231548663 - L2 LINE L2 -1405 1909 1762 236 252 61 69 chr2 19139448 19139579 -231548275 - MIR SINE MIR -1 261 132 23 0 0 0 chr2 19140656 19140679 -231547175 + AT_rich Low_complexity Low_complexity 1 23 0 236 300 29 0 chr2 19140988 19141058 -231546796 + CT-rich Low_complexity Low_complexity 1 72 0 35 0 0 0 chr2 19141058 19141093 -231546761 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr2 19141298 19141335 -231546519 + (TG)n Simple_repeat Simple_repeat 2 38 0 548 210 94 0 chr2 19141408 19141546 -231546308 + MIR SINE MIR 47 197 -65 201 175 0 0 chr2 19142804 19142844 -231545010 + CT-rich Low_complexity Low_complexity 2 41 0 239 293 34 57 chr2 19142910 19143068 -231544786 - MIR SINE MIR -34 174 23 * 321 340 10 10 chr2 19143010 19143113 -231544741 + MIR SINE MIR 10 112 -150 2039 170 8 6 chr2 19143237 19143601 -231544253 + MLT1A1 LTR MaLR 1 365 0 308 259 132 26 chr2 19143601 19143905 -231543949 - L1ME LINE L1 -488 5674 5341 2237 101 3 3 chr2 19145421 19145729 -231542125 - AluY SINE Alu -3 308 1 207 0 0 0 chr2 19146343 19146366 -231541488 + (TTG)n Simple_repeat Simple_repeat 2 24 0 534 238 122 24 chr2 19146378 19146542 -231541312 - MER5A DNA MER1_type 0 189 10 36 40 0 0 chr2 19148266 19148316 -231539538 + AT_rich Low_complexity Low_complexity 1 50 0 482 301 85 42 chr2 19148394 19148972 -231538882 + L1MC/D LINE L1 4243 4845 -1301 671 327 99 22 chr2 19149026 19149530 -231538324 + L1MC/D LINE L1 4836 5378 -768 1730 199 14 9 chr2 19149530 19149951 -231537903 + L1PB3 LINE L1 4753 5175 -971 1698 160 0 4 chr2 19149955 19150218 -231537636 + AluSx SINE Alu 13 274 -38 4621 147 38 2 chr2 19150219 19151027 -231536827 + L1PB3 LINE L1 5317 6153 -1 354 312 127 35 chr2 19151161 19151476 -231536378 + L1MC/D LINE L1 5417 5760 -536 622 92 0 0 chr2 19152991 19153078 -231534776 - L1P LINE L1 -6049 97 11 518 288 30 0 chr2 19153642 19153774 -231534080 - MIR SINE MIR -70 192 57 1026 163 16 22 chr2 19154628 19154812 -231533042 - AluJb SINE Alu -8 304 122 40579 34 23 1 chr2 19155205 19161228 -231526626 - L1PA2 LINE L1 -2 6153 2 195 204 0 0 chr2 19161313 19161357 -231526497 + CT-rich Low_complexity Low_complexity 2 45 0 377 265 81 0 chr2 19162055 19162191 -231525663 + MIR SINE MIR 101 247 -15 1410 110 0 55 chr2 19162674 19162893 -231524961 + AluSq SINE Alu 1 207 -106 348 64 0 0 chr2 19162920 19162967 -231524887 + (TG)n Simple_repeat Simple_repeat 2 48 0 398 289 162 12 chr2 19163161 19163334 -231524520 - MIR SINE MIR -19 243 45 626 250 45 17 chr2 19163986 19164162 -231523692 - MIR SINE MIR -76 186 6 1236 223 63 17 chr2 19164350 19164700 -231523154 + MLT1A2 LTR MaLR 1 654 0 193 293 85 49 chr2 19164722 19164804 -231523050 + L2 LINE L2 3186 3270 -43 323 294 40 89 chr2 19165464 19165767 -231522087 - L3 LINE CR1 -45 1532 1245 271 246 72 0 chr2 19165827 19165896 -231521958 + MER91B DNA MER1_type 3 76 -114 231 324 183 23 chr2 19165974 19166193 -231521661 - L3 LINE CR1 -342 1235 982 290 373 63 0 chr2 19166353 19166511 -231521343 + L2 LINE L2 3099 3266 -6 2498 53 3 34 chr2 19170105 19170425 -231517429 - AluY SINE Alu -1 310 1 371 291 35 47 chr2 19170735 19170907 -231516947 + MIR SINE MIR 20 189 -73 2396 84 7 10 chr2 19170972 19171280 -231516574 - AluSp SINE Alu -6 307 1 186 43 0 0 chr2 19171394 19171417 -231516437 + (TG)n Simple_repeat Simple_repeat 2 24 0 221 292 72 26 chr2 19172118 19172279 -231515575 + MIR SINE MIR 20 188 -62 393 278 25 56 chr2 19172397 19172559 -231515295 - MIR3 SINE MIR -17 191 35 1950 268 96 18 chr2 19173174 19174419 -231513435 - L1MEc LINE L1 -1730 4485 3143 267 284 128 35 chr2 19174415 19174556 -231513298 - L1MEc LINE L1 -4719 1677 1524 * 685 353 19 6 chr2 19174567 19174927 -231512927 + HERVL LTR ERVL 3903 4267 -1387 482 279 60 60 chr2 19175144 19175413 -231512441 + LTR33 LTR ERVL 1 269 -252 276 291 47 0 chr2 19175495 19175581 -231512273 + LTR33 LTR ERVL 298 387 -134 373 238 0 49 chr2 19175775 19175897 -231511957 - MIR SINE MIR -28 234 119 783 256 74 9 chr2 19175998 19176228 -231511626 + MIR SINE MIR 7 251 -11 306 0 0 0 chr2 19177887 19177921 -231509933 + (TC)n Simple_repeat Simple_repeat 2 35 0 288 0 0 0 chr2 19177945 19177977 -231509877 + (GA)n Simple_repeat Simple_repeat 2 33 0 1865 127 13 37 chr2 19178024 19178324 -231509530 + AluSx SINE Alu 5 297 -15 180 311 123 0 chr2 19178372 19178478 -231509376 - L2 LINE L2 0 3313 3195 1399 147 43 0 chr2 19180223 19180463 -231507391 - L1MA9 LINE L1 -268 6044 5791 270 0 0 0 chr2 19180463 19180493 -231507361 + (TG)n Simple_repeat Simple_repeat 1 30 0 1399 147 43 0 chr2 19180493 19180510 -231507344 - L1MA9 LINE L1 -521 5791 5776 344 39 0 20 chr2 19180580 19180631 -231507223 + (TA)n Simple_repeat Simple_repeat 2 51 0 1447 171 33 0 chr2 19180644 19180918 -231506936 - L1MA9 LINE L1 -538 5774 5492 570 138 24 42 chr2 19180931 19181199 -231506655 + (TA)n Simple_repeat Simple_repeat 1 263 0 227 267 0 22 chr2 19181225 19181315 -231506539 + L1MC4 LINE L1 6616 6703 -1339 * 286 258 0 0 chr2 19181313 19181402 -231506452 - L1MC4 LINE L1 -1339 6703 6615 383 207 23 17 chr2 19181405 19181579 -231506275 + (TA)n Simple_repeat Simple_repeat 1 175 0 200 117 50 17 chr2 19181606 19181666 -231506188 + (TA)n Simple_repeat Simple_repeat 1 62 0 5066 177 26 5 chr2 19181701 19182901 -231504953 - L1MA9 LINE L1 -694 5474 4255 351 243 62 97 chr2 19184101 19184245 -231503609 + MIR SINE MIR 63 201 -61 25 51 0 0 chr2 19184257 19184296 -231503558 + AT_rich Low_complexity Low_complexity 1 39 0 402 194 0 0 chr2 19184325 19184392 -231503462 - AluJ/FRAM SINE Alu -27 285 219 344 175 0 0 chr2 19184481 19184538 -231503316 - AluS SINE Alu -243 57 1 363 161 0 0 chr2 19184730 19184792 -231503062 + MER3 DNA MER1_type 12 73 -136 222 37 0 0 chr2 19185957 19185984 -231501870 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 206 365 26 17 chr2 19186259 19186374 -231501480 + MIR SINE MIR 23 138 -124 234 167 0 0 chr2 19186536 19186572 -231501282 + MIR SINE MIR 219 254 -8 180 0 0 0 chr2 19188145 19188165 -231499689 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 310 288 140 54 chr2 19188486 19188708 -231499146 + L2 LINE L2 2824 3064 -208 200 246 35 0 chr2 19190060 19190117 -231497737 + GA-rich Low_complexity Low_complexity 2 60 0 219 261 116 93 chr2 19191341 19191609 -231496245 + L2 LINE L2 2999 3272 0 463 306 99 60 chr2 19191854 19192236 -231495618 - L2 LINE L2 -48 3224 2828 572 281 60 16 chr2 19192761 19193010 -231494844 + MIR SINE MIR 3 262 0 522 254 119 15 chr2 19193045 19193246 -231494608 - MIR SINE MIR 0 262 41 338 310 35 9 chr2 19193281 19193397 -231494457 - MIR3 SINE MIR -7 201 83 1843 111 22 15 chr2 19193431 19193701 -231494153 + AluSg SINE Alu 16 287 -23 295 318 36 24 chr2 19194266 19194433 -231493421 + MIR SINE MIR 30 200 -62 201 293 19 66 chr2 19194485 19194591 -231493263 + L2 LINE L2 2957 3057 -215 209 352 34 0 chr2 19195367 19195455 -231492399 - MIR SINE MIR -55 207 117 180 254 0 51 chr2 19195460 19195519 -231492335 - MIR3 SINE MIR -141 67 12 328 267 67 44 chr2 19195830 19195965 -231491889 - MIR3 SINE MIR -21 187 50 596 205 31 0 chr2 19196143 19196304 -231491550 - L1ME1 LINE L1 -292 5943 5778 * 3883 253 154 25 chr2 19196302 19198157 -231489697 - L1ME1 LINE L1 -4264 2132 40 23 68 0 0 chr2 19198983 19199027 -231488827 + AT_rich Low_complexity Low_complexity 1 44 0 531 194 102 0 chr2 19199662 19199760 -231488094 - FLAM_A SINE Alu -34 108 1 2404 145 44 0 chr2 19199832 19200240 -231487614 + MSTA LTR MaLR 3 428 0 1072 232 32 0 chr2 19200240 19200524 -231487330 - L1MEc LINE L1 -3368 3573 3281 403 288 33 41 chr2 19200551 19200822 -231487032 - L1MEc LINE L1 -5042 2080 1812 713 216 157 37 chr2 19200842 19201193 -231486661 - L1MEc LINE L1 -4888 1535 1143 470 197 66 53 chr2 19201192 19201344 -231486510 - L1MEc LINE L1 -6251 172 19 * 221 98 24 0 chr2 19201346 19201387 -231486467 + (CTATT)n Simple_repeat Simple_repeat 1 42 0 22 35 0 0 chr2 19201631 19201660 -231486194 + AT_rich Low_complexity Low_complexity 1 29 0 2613 107 28 26 chr2 19202212 19202634 -231485220 - MSTA LTR MaLR 0 428 6 186 43 0 0 chr2 19202634 19202657 -231485197 + (A)n Simple_repeat Simple_repeat 1 23 0 369 326 86 21 chr2 19203914 19204193 -231483661 + MARNA DNA Mariner 77 373 -213 342 181 96 0 chr2 19204724 19204807 -231483047 - MER97a DNA MER1_type? 0 894 804 1697 207 56 11 chr2 19204861 19205306 -231482548 - MER97a DNA MER1_type? -170 724 260 1059 188 95 67 chr2 19205304 19205650 -231482204 - MER97a DNA MER1_type? -535 359 4 * 590 314 120 20 chr2 19206198 19206555 -231481299 + HAL1 LINE L1 798 1190 -1317 189 296 19 0 chr2 19207444 19207498 -231480356 - MIR SINE MIR -69 139 85 202 220 0 51 chr2 19209081 19209140 -231478714 + CT-rich Low_complexity Low_complexity 1 56 0 199 288 70 48 chr2 19210060 19210289 -231477565 + L2 LINE L2 2032 2265 -1049 397 275 124 50 chr2 19210437 19210655 -231477199 + MIR SINE MIR 20 253 -9 1914 126 11 0 chr2 19211277 19211589 -231476265 + AluSx SINE Alu 1 315 0 399 340 7 7 chr2 19212771 19212918 -231474936 + MIR SINE MIR 3 149 -113 1766 109 9 103 chr2 19212978 19213298 -231474556 - AluY SINE Alu -21 290 1 2067 240 96 94 chr2 19213584 19215283 -231472571 + L1MDa LINE L1 52 1754 -4786 1394 158 35 8 chr2 19215310 19215558 -231472296 - MSTB1 LTR MaLR 0 432 178 4202 74 22 36 chr2 19215558 19216702 -231471152 - MER11A LTR ERVK 0 1266 1 1085 128 0 6 chr2 19216702 19216865 -231470989 - MSTB1 LTR MaLR -248 178 17 481 150 0 0 chr2 19216879 19216979 -231470875 + L1MDa LINE L1 2005 2104 -4436 1397 206 110 0 chr2 19217050 19217331 -231470523 + AluJb SINE Alu 1 312 0 238 175 0 32 chr2 19217423 19217486 -231470368 - L1MC4 LINE L1 -1339 6703 6643 * 290 200 33 0 chr2 19217453 19217543 -231470311 + L1MDa LINE L1 2323 2415 -4125 * 12896 158 76 11 chr2 19217533 19221891 -231465963 + L1PB1 LINE L1 453 5163 -1699 216 0 0 0 chr2 19221891 19221915 -231465939 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 12896 158 76 11 chr2 19221915 19222398 -231465456 + L1PB1 LINE L1 5163 5613 -1249 1955 109 138 9 chr2 19222399 19222423 -231465431 + L1PB1 LINE L1 6473 6493 -374 360 0 0 0 chr2 19222423 19222463 -231465391 + (CA)n Simple_repeat Simple_repeat 2 41 0 1955 109 138 9 chr2 19222463 19222787 -231465067 + L1PB1 LINE L1 6493 6866 -1 783 141 7 27 chr2 19222943 19223092 -231464762 + L1MA10 LINE L1 6186 6331 -3 1127 181 54 10 chr2 19223101 19223526 -231464328 + L1MDa LINE L1 2393 2835 -3705 923 168 20 35 chr2 19223651 19223848 -231464006 - L1MD3 LINE L1 -710 7285 7092 893 259 91 53 chr2 19223862 19224368 -231463486 - L1MD3 LINE L1 -1988 5820 5296 2556 121 77 22 chr2 19224716 19225199 -231462655 - L1MA8 LINE L1 0 6291 5779 195 42 0 0 chr2 19225199 19225223 -231462631 + (CA)n Simple_repeat Simple_repeat 2 25 0 2556 121 77 22 chr2 19225223 19225235 -231462619 - L1MA8 LINE L1 -512 5779 5769 878 293 9 19 chr2 19225235 19225552 -231462302 + HsTC2b DNA Tc2 34 347 -568 763 215 45 19 chr2 19225623 19225888 -231461966 + HsTC2b DNA Tc2 644 915 -3 361 274 40 8 chr2 19226202 19226326 -231461528 + L1M2b LINE L1 1588 1715 -5494 * 8002 210 36 26 chr2 19226316 19229736 -231458118 + L1M2 LINE L1 789 4244 -2604 335 280 4 17 chr2 19229773 19229894 -231457960 - MLT1I LTR MaLR -208 203 80 796 251 66 29 chr2 19230886 19231017 -231456837 + MER45C DNA AcHobo 14 139 -814 2150 167 82 18 chr2 19231017 19231455 -231456399 + MLT1C LTR MaLR 1 466 -1 796 251 66 29 chr2 19231455 19231566 -231456288 + MER45C DNA AcHobo 139 265 -688 709 223 154 0 chr2 19231636 19231824 -231456030 + MER45C DNA AcHobo 730 946 -7 194 271 140 47 chr2 19233545 19233652 -231454202 - L2 LINE L2 -5 3308 3192 923 298 188 17 chr2 19234219 19235217 -231452637 + L2 LINE L2 2140 3313 0 543 291 20 5 chr2 19235494 19235690 -231452164 - MIR SINE MIR 0 262 64 255 244 89 65 chr2 19235722 19235845 -231452009 + MLT1K LTR MaLR 378 503 -85 237 33 0 0 chr2 19237113 19237143 -231450711 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 734 86 0 0 chr2 19237553 19237658 -231450196 + AluSp/q SINE Alu 207 311 -2 23 0 0 0 chr2 19238976 19238999 -231448855 + AT_rich Low_complexity Low_complexity 1 23 0 333 341 29 59 chr2 19239083 19239356 -231448498 - L2 LINE L2 -2072 1242 978 292 240 115 44 chr2 19239456 19239639 -231448215 - L1ME4a LINE L1 -74 6047 5852 307 287 45 7 chr2 19239671 19239811 -231448043 - MIR SINE MIR -62 146 16 303 282 94 18 chr2 19240442 19240612 -231447242 - MIR SINE MIR -4 258 76 253 302 35 0 chr2 19240931 19241017 -231446837 - MIR3 SINE MIR -6 202 114 2165 128 0 0 chr2 19241218 19241508 -231446346 + AluSx SINE Alu 2 291 -21 195 42 0 0 chr2 19241511 19241535 -231446319 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 457 310 52 54 chr2 19242116 19242539 -231445315 - L2 LINE L2 -1905 1409 912 21 0 0 0 chr2 19243364 19243385 -231444469 + AT_rich Low_complexity Low_complexity 1 21 0 204 308 63 56 chr2 19243519 19243662 -231444192 - MIR SINE MIR -117 145 2 1931 203 57 5 chr2 19245105 19245543 -231442311 + L1MD3 LINE L1 7535 7995 0 403 278 66 54 chr2 19245783 19246042 -231441812 - MIR SINE MIR 0 262 1 198 286 29 14 chr2 19246072 19246142 -231441712 - L2 LINE L2 -24 3248 3178 270 264 9 57 chr2 19246166 19246272 -231441582 - MIR SINE MIR -66 196 96 515 56 99 0 chr2 19246958 19247029 -231440825 + MADE1 DNA Mariner 1 78 -2 192 77 0 0 chr2 19247168 19247194 -231440660 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 243 326 61 99 chr2 19247195 19247508 -231440346 - L2 LINE L2 -15 3257 2957 2302 104 0 0 chr2 19248642 19248940 -231438914 - AluY SINE Alu -13 298 1 230 196 28 75 chr2 19250663 19250770 -231437084 + GA-rich Low_complexity Low_complexity 2 103 0 448 256 100 18 chr2 19251685 19251844 -231436010 + MER5B DNA MER1_type 15 175 -3 221 290 178 0 chr2 19252425 19252532 -231435322 + MIR3 SINE MIR 81 206 -2 219 276 38 29 chr2 19252658 19252763 -231435091 - MIR SINE MIR -109 153 48 235 340 55 63 chr2 19254791 19255029 -231432825 - L2 LINE L2 -3 3269 3034 1470 215 90 54 chr2 19255059 19255505 -231432349 + MLT1C LTR MaLR 6 467 0 274 227 68 34 chr2 19255797 19255885 -231431969 + MLT1K LTR MaLR 142 232 -356 635 161 108 0 chr2 19256372 19256511 -231431343 - MSTC LTR MaLR -244 152 1 6379 235 67 44 chr2 19256511 19256855 -231430999 - MSTD-int LTR MaLR 0 1735 1401 1831 96 69 38 chr2 19256855 19257146 -231430708 - AluSx SINE Alu -8 304 5 6379 235 67 44 chr2 19257146 19258495 -231429359 - MSTD-int LTR MaLR -334 1401 2 1622 192 70 44 chr2 19258497 19258883 -231428971 - MSTD LTR MaLR 0 396 1 333 277 0 64 chr2 19259324 19259465 -231428389 + MIR SINE MIR 86 217 -45 2334 168 33 12 chr2 19260659 19261082 -231426772 + MSTB1 LTR MaLR 1 432 0 415 287 7 21 chr2 19261199 19261342 -231426512 - MIR SINE MIR -54 208 68 2319 105 0 0 chr2 19262236 19262531 -231425323 + AluSp SINE Alu 1 295 -18 225 390 50 7 chr2 19262713 19262854 -231425000 - L3b LINE CR1 -87 1496 1350 39 0 0 0 chr2 19262964 19263003 -231424851 + AT_rich Low_complexity Low_complexity 1 39 0 2170 143 0 83 chr2 19263015 19263413 -231424441 - MLT1A1 LTR MaLR 0 365 1 254 262 82 83 chr2 19263804 19263966 -231423888 - L1ME LINE L1 -426 5744 5583 2332 98 10 0 chr2 19263966 19264271 -231423583 - AluSq SINE Alu -5 308 1 254 262 82 83 chr2 19264271 19264432 -231423422 - L1ME LINE L1 -587 5583 5349 472 298 53 21 chr2 19264462 19264744 -231423110 - L1ME LINE L1 -805 5341 5051 183 297 47 16 chr2 19264900 19264964 -231422890 + MIR SINE MIR 111 176 -86 213 292 15 0 chr2 19266827 19266892 -231420962 + MIR SINE MIR 2 67 -195 2307 120 0 0 chr2 19266998 19267307 -231420547 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr2 19268551 19268575 -231419279 + AT_rich Low_complexity Low_complexity 1 24 0 1394 197 15 4 chr2 19268682 19268951 -231418903 + L1MC1 LINE L1 6061 6332 -1 285 167 0 0 chr2 19269257 19269311 -231418543 + T-rich Low_complexity Low_complexity 1 54 0 952 295 77 19 chr2 19271912 19272224 -231415630 - MER115 DNA AcHobo -329 364 35 316 304 29 0 chr2 19272291 19272393 -231415461 + MIR SINE MIR 35 139 -123 1104 161 32 37 chr2 19273593 19273811 -231414043 - MER20 DNA MER1_type -2 217 1 393 317 34 47 chr2 19274006 19274224 -231413630 - MIR SINE MIR -31 231 11 293 0 0 26 chr2 19275396 19275434 -231412420 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 578 247 47 12 chr2 19276075 19276245 -231411609 + MIR3 SINE MIR 33 208 0 426 85 0 0 chr2 19277034 19277093 -231410761 + (TTA)n Simple_repeat Simple_repeat 2 60 0 261 0 0 0 chr2 19277793 19277822 -231410032 + (TC)n Simple_repeat Simple_repeat 1 29 0 200 360 73 0 chr2 19279890 19280026 -231407828 + L2 LINE L2 2609 2754 -560 237 316 20 46 chr2 19280127 19280279 -231407575 + L2 LINE L2 2895 3042 -230 * 1463 280 245 55 chr2 19280265 19281939 -231405915 + L2 LINE L2 316 2433 -881 288 0 0 0 chr2 19281939 19281971 -231405883 + (CA)n Simple_repeat Simple_repeat 1 32 0 1463 280 245 55 chr2 19281971 19282294 -231405560 + L2 LINE L2 2433 2693 -621 188 0 74 0 chr2 19282294 19282321 -231405533 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 3106 123 10 26 chr2 19282331 19282826 -231405028 - L1MC1 LINE L1 -420 5913 5427 528 302 28 74 chr2 19282827 19283215 -231404639 + L2 LINE L2 2688 3055 -258 559 205 80 113 chr2 19283958 19284197 -231403657 - MER112 DNA MER1_type -13 247 17 299 341 96 15 chr2 19284418 19284553 -231403301 + MIR3 SINE MIR 31 176 -32 1765 181 13 7 chr2 19284812 19285122 -231402732 - AluJb SINE Alu 0 312 1 2293 114 0 19 chr2 19285327 19285644 -231402210 - AluY SINE Alu 0 311 1 533 315 94 16 chr2 19287075 19287329 -231400525 - L3 LINE CR1 -175 1402 1129 1996 188 48 0 chr2 19288972 19289344 -231398510 + MLT1B LTR MaLR 1 390 0 481 312 39 24 chr2 19289504 19289709 -231398145 - MIR SINE MIR -34 228 21 197 254 79 16 chr2 19290055 19290118 -231397736 + MIR3 SINE MIR 135 201 -7 789 171 11 11 chr2 19290543 19290719 -231397135 + G-rich Low_complexity Low_complexity 4 179 0 587 199 13 32 chr2 19290737 19290991 -231396863 + G-rich Low_complexity Low_complexity 1 249 0 312 158 0 0 chr2 19290991 19291048 -231396806 + GA-rich Low_complexity Low_complexity 1 57 0 340 292 168 0 chr2 19291420 19291533 -231396321 + L2 LINE L2 3182 3313 0 2196 139 0 0 chr2 19291991 19292294 -231395560 + AluSx SINE Alu 7 309 -3 577 158 0 0 chr2 19292620 19292715 -231395139 - L1MC3 LINE L1 -492 7293 7199 292 272 43 0 chr2 19292715 19292807 -231395047 - MLT1F1 LTR MaLR -437 130 35 423 136 37 0 chr2 19292807 19292888 -231394966 - L1MC3 LINE L1 -688 7097 7014 2823 179 48 16 chr2 19292892 19293473 -231394381 - L1MC3 LINE L1 -820 6965 6366 1137 272 46 12 chr2 19293476 19293799 -231394055 - MER45C DNA AcHobo -140 813 480 896 204 47 5 chr2 19293796 19293987 -231393867 - MER45C DNA AcHobo -754 199 1 * 359 220 21 99 chr2 19294515 19294681 -231393173 + MIR SINE MIR 97 255 -7 181 307 0 40 chr2 19295588 19295663 -231392191 - L2 LINE L2 -20 3252 3181 645 292 0 0 chr2 19295729 19295897 -231391957 - MIR SINE MIR -14 248 81 857 253 101 34 chr2 19295897 19296285 -231391569 - LTR16B LTR ERVL 0 464 51 227 222 12 123 chr2 19296348 19296429 -231391425 - MIR SINE MIR -187 75 4 388 365 47 28 chr2 19296618 19296832 -231391022 - L2 LINE L2 -89 3183 2966 242 214 0 18 chr2 19296904 19296960 -231390894 - L2 LINE L2 -339 2974 2920 23 0 0 0 chr2 19297682 19297705 -231390149 + AT_rich Low_complexity Low_complexity 1 23 0 266 160 60 0 chr2 19297783 19297833 -231390021 - MLT1G1 LTR MaLR -182 413 361 917 252 20 31 chr2 19297876 19298130 -231389724 - MLT1G1 LTR MaLR -342 253 3 461 275 182 22 chr2 19298811 19299080 -231388774 + MLT1K LTR MaLR 277 588 0 1043 266 68 64 chr2 19300458 19300925 -231386929 - L2 LINE L2 -4 3309 2841 186 298 0 0 chr2 19301904 19301951 -231385903 + MIR SINE MIR 98 144 -64 537 272 90 23 chr2 19302786 19303111 -231384743 + MLT1I LTR MaLR 4 406 -3 423 315 23 15 chr2 19304024 19304154 -231383700 + MIR3 SINE MIR 78 208 0 219 146 0 0 chr2 19304255 19304296 -231383558 + (CA)n Simple_repeat Simple_repeat 2 42 0 186 43 0 0 chr2 19304795 19304818 -231383036 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 * 198 0 0 0 chr2 19304817 19304839 -231383015 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 333 0 0 0 chr2 19304838 19304875 -231382979 + (CA)n Simple_repeat Simple_repeat 1 37 0 329 327 50 0 chr2 19305682 19305783 -231382071 + MIR SINE MIR 40 145 -63 2411 134 0 30 chr2 19306473 19306875 -231380979 + MLT1B LTR MaLR 1 390 0 398 292 46 0 chr2 19306913 19307043 -231380811 - MIR3 SINE MIR -8 200 65 1838 149 27 7 chr2 19307880 19308175 -231379679 - AluSx SINE Alu -11 301 1 912 355 112 23 chr2 19309974 19310726 -231377128 + L1M4 LINE L1 3705 4523 -1623 180 276 0 69 chr2 19310825 19310883 -231376971 + L3 LINE CR1 1413 1466 -111 21 36 0 0 chr2 19311282 19311310 -231376544 + AT_rich Low_complexity Low_complexity 1 28 0 547 221 0 47 chr2 19311525 19311652 -231376202 + L2 LINE L2 3193 3313 0 310 293 162 39 chr2 19311659 19311918 -231375936 - L1M4 LINE L1 -786 5360 5070 425 331 15 15 chr2 19312809 19312939 -231374915 - MIR SINE MIR -121 141 12 474 248 19 0 chr2 19312941 19313046 -231374808 - MER81 DNA DNA 0 114 8 1234 174 70 52 chr2 19313047 19313402 -231374452 - MSTA LTR MaLR -2 426 3 201 94 0 0 chr2 19313474 19313506 -231374348 + (TC)n Simple_repeat Simple_repeat 2 33 0 465 295 31 81 chr2 19314754 19315012 -231372842 - MIR SINE MIR 0 262 18 240 35 0 0 chr2 19316435 19316464 -231371390 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2156 146 3 0 chr2 19317124 19317433 -231370421 - AluJb SINE Alu -2 310 1 1545 216 60 6 chr2 19317615 19317966 -231369888 + MLT1C LTR MaLR 95 464 -3 755 232 179 25 chr2 19317993 19318273 -231369581 + L2 LINE L2 2031 2353 -961 253 263 66 0 chr2 19318417 19318493 -231369361 - L2 LINE L2 -39 3233 3153 1305 263 24 29 chr2 19321258 19321537 -231366317 + L2 LINE L2 2164 2442 -872 1888 138 29 109 chr2 19321537 19321985 -231365869 + MLT2D LTR ERVL 1 412 -2 1305 263 24 29 chr2 19321985 19322124 -231365730 + L2 LINE L2 2442 2580 -734 1178 140 0 22 chr2 19322131 19322310 -231365544 + AluJb SINE Alu 136 310 -2 328 330 92 16 chr2 19322323 19322508 -231365346 + L2 LINE L2 3085 3283 -30 1624 219 23 6 chr2 19322510 19322862 -231364992 - MLT1A1 LTR MaLR -7 358 1 607 208 158 35 chr2 19323950 19324152 -231363702 - MIR SINE MIR -5 257 31 335 297 185 49 chr2 19324242 19324632 -231363222 + L2 LINE L2 2871 3313 0 346 280 8 8 chr2 19324844 19324962 -231362892 + Charlie5 DNA MER1_type 7 124 -2488 2077 113 25 6 chr2 19324973 19325335 -231362519 + Charlie5 DNA MER1_type 2245 2613 0 2383 131 44 109 chr2 19325777 19326280 -231361574 + MER101 LTR ERV1 4 473 -1 24 0 0 0 chr2 19326621 19326645 -231361209 + AT_rich Low_complexity Low_complexity 1 24 0 1980 192 21 45 chr2 19327253 19327722 -231360132 + MLT1D LTR MaLR 1 458 -47 444 232 92 14 chr2 19328120 19328262 -231359592 - MIR3 SINE MIR -31 177 25 275 235 0 15 chr2 19329663 19329731 -231358123 - MIR SINE MIR -16 246 180 718 214 15 82 chr2 19329751 19329947 -231357907 - MER5A DNA MER1_type -6 183 1 434 298 71 40 chr2 19329970 19330195 -231357659 - MIR SINE MIR -26 236 5 1031 235 70 9 chr2 19330819 19331049 -231356805 - MIR SINE MIR -17 245 2 246 200 29 0 chr2 19331113 19331183 -231356671 + (TAG)n Simple_repeat Simple_repeat 2 73 0 373 339 6 0 chr2 19331212 19331389 -231356465 + (TAG)n Simple_repeat Simple_repeat 2 179 0 222 225 0 0 chr2 19331423 19331503 -231356351 + (TAG)n Simple_repeat Simple_repeat 3 82 0 725 341 28 4 chr2 19331608 19331857 -231355997 + MIR SINE MIR 1 255 -7 538 290 56 28 chr2 19332835 19333049 -231354805 - MIR SINE MIR -6 256 37 288 346 74 52 chr2 19333335 19333566 -231354288 - L2 LINE L2 -470 2844 2609 741 117 0 0 chr2 19335415 19335552 -231352302 + (GGAA)n Simple_repeat Simple_repeat 3 139 0 1817 100 76 17 chr2 19337611 19337900 -231349954 - AluSx SINE Alu -6 306 1 180 345 0 17 chr2 19338018 19338076 -231349778 - MIR SINE MIR -6 256 200 459 326 22 11 chr2 19340246 19340424 -231347430 + MIR3 SINE MIR 22 201 -7 226 250 50 0 chr2 19340598 19340678 -231347176 + L1MC4 LINE L1 6617 6700 -1342 276 30 0 0 chr2 19340683 19340716 -231347138 + (TG)n Simple_repeat Simple_repeat 1 33 0 183 323 0 0 chr2 19340811 19340873 -231346981 + L2 LINE L2 2996 3057 -215 498 259 63 11 chr2 19341129 19341318 -231346536 + L1ME2 LINE L1 4943 5141 -1005 1097 142 18 60 chr2 19341319 19341537 -231346317 + AluJb SINE Alu 86 294 -18 3060 236 41 22 chr2 19341549 19342519 -231345335 + L1ME2 LINE L1 5162 6156 -8 240 329 25 0 chr2 19342549 19342628 -231345226 - L2 LINE L2 -4 3309 3229 378 0 0 0 chr2 19342706 19342748 -231345106 + (CA)n Simple_repeat Simple_repeat 1 42 0 541 303 91 0 chr2 19343624 19343822 -231344032 + MIR SINE MIR 46 261 -1 282 382 40 10 chr2 19344010 19344209 -231343645 - MIR SINE MIR -39 223 19 410 351 50 45 chr2 19344886 19345328 -231342526 - L2 LINE L2 0 3272 2829 1085 194 41 0 chr2 19345432 19345628 -231342226 - MER3 DNA MER1_type -5 204 1 315 0 0 0 chr2 19346908 19346943 -231340911 + (TG)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr2 19347823 19347846 -231340008 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 249 325 26 0 chr2 19349401 19349478 -231338376 - MIR SINE MIR -16 246 168 627 194 58 52 chr2 19349592 19349783 -231338071 - MER112 DNA MER1_type -3 257 66 673 302 60 65 chr2 19351451 19351802 -231336052 - L2 LINE L2 -2 3270 2922 576 367 84 19 chr2 19354202 19354888 -231332966 - L2 LINE L2 -176 3096 2363 429 204 0 11 chr2 19356557 19356645 -231331209 + MLT1C LTR MaLR 381 467 0 396 298 35 0 chr2 19358674 19358788 -231329066 - MIR SINE MIR -35 227 110 399 314 15 31 chr2 19358859 19358990 -231328864 - MIR3 SINE MIR -6 202 73 2082 124 3 0 chr2 19359877 19360183 -231327671 + AluSc SINE Alu 1 307 -2 208 271 21 0 chr2 19360325 19360373 -231327481 + L2 LINE L2 3250 3298 -15 1286 243 93 33 chr2 19360390 19360789 -231327065 + MLT1J2 LTR MaLR 3 425 -25 1983 117 43 0 chr2 19361976 19362275 -231325579 + AluSx SINE Alu 1 312 0 184 206 29 200 chr2 19362326 19362496 -231325358 + MIR SINE MIR 56 196 -66 192 135 0 0 chr2 19362772 19362809 -231325045 + (TG)n Simple_repeat Simple_repeat 1 37 0 192 333 18 105 chr2 19362900 19363014 -231324840 - L2 LINE L2 -182 3090 2987 227 39 0 0 chr2 19365799 19365825 -231322029 + AluY SINE Alu 11 36 -264 633 141 0 0 chr2 19365825 19365917 -231321937 + AluSg/x SINE Alu 206 297 -13 308 272 154 6 chr2 19365918 19366080 -231321774 + L1M4 LINE L1 2435 2620 -3526 1018 169 4 37 chr2 19366276 19366519 -231321335 + L1M4 LINE L1 2645 2879 -3267 1510 204 64 52 chr2 19366528 19366968 -231320886 - L1MA9 LINE L1 -37 6275 5831 * 1676 232 99 3 chr2 19366964 19367538 -231320316 + L1M4 LINE L1 2840 3468 -2678 2389 202 32 4 chr2 19367550 19368011 -231319843 + L1MB5 LINE L1 3 476 -6373 426 103 0 0 chr2 19368072 19368130 -231319724 - Alu SINE Alu -259 59 2 7371 206 30 15 chr2 19368215 19370696 -231317158 + L1MB5 LINE L1 4177 6694 -182 465 19 0 0 chr2 19370731 19370785 -231317069 + (TG)n Simple_repeat Simple_repeat 2 55 0 201 121 0 0 chr2 19370799 19370832 -231317022 + (TA)n Simple_repeat Simple_repeat 1 33 0 1971 149 30 41 chr2 19370838 19370983 -231316871 - MLT2D LTR ERVL -50 364 219 1821 157 24 42 chr2 19370983 19371365 -231316489 - THE1C LTR MaLR 0 375 1 1971 149 30 41 chr2 19371365 19371587 -231316267 - MLT2D LTR ERVL -195 219 1 569 240 47 47 chr2 19371587 19371617 -231316237 + L1MB5 LINE L1 6698 6727 -149 2502 175 33 4 chr2 19371617 19372069 -231315785 - MLT1C LTR MaLR -2 465 1 569 240 47 47 chr2 19372069 19372209 -231315645 + L1MB5 LINE L1 6726 6868 -8 1770 154 14 0 chr2 19372762 19373055 -231314799 + AluSx SINE Alu 3 299 -13 190 397 0 0 chr2 19373291 19373369 -231314485 - MER5C DNA MER1_type -245 79 2 1239 238 134 2 chr2 19373535 19373938 -231313916 + L1ME3A LINE L1 5710 6165 -5 437 195 73 0 chr2 19374619 19374701 -231313153 + MER91C DNA MER1_type 1 88 -52 420 20 0 0 chr2 19374717 19374766 -231313088 + (TC)n Simple_repeat Simple_repeat 1 49 0 183 235 47 47 chr2 19376514 19376525 -231311329 + MER5A DNA MER1_type 6 16 -173 282 250 79 85 chr2 19376525 19376666 -231311188 - MER5B DNA MER1_type -2 187 16 202 243 100 43 chr2 19377431 19377501 -231310353 + L2 LINE L2 3168 3241 -31 1255 298 100 49 chr2 19379548 19380555 -231307299 - L2 LINE L2 0 3272 2213 293 297 123 14 chr2 19380685 19380946 -231306908 + L2 LINE L2 2720 3002 -270 337 299 41 14 chr2 19381723 19381870 -231305984 + L2 LINE L2 2825 2975 -338 2433 92 14 20 chr2 19382384 19382741 -231305113 + THE1A LTR MaLR 1 355 0 9271 96 34 1 chr2 19382741 19383986 -231303868 + THE1A-int LTR MaLR 1 1286 -294 354 81 46 23 chr2 19384342 19384429 -231303425 + (CA)n Simple_repeat Simple_repeat 2 90 0 827 62 9 26 chr2 19384455 19384568 -231303286 + THE1B LTR MaLR 1 111 -253 394 135 49 34 chr2 19384569 19384897 -231302957 + (CA)n Simple_repeat Simple_repeat 1 333 0 436 240 40 16 chr2 19385307 19385432 -231302422 + MIR SINE MIR 19 146 -62 333 0 0 0 chr2 19385785 19385822 -231302032 + (CA)n Simple_repeat Simple_repeat 2 38 0 390 337 57 73 chr2 19386726 19387026 -231300828 - L2 LINE L2 -20 3252 2958 2010 143 3 26 chr2 19388673 19388980 -231298874 + AluJo SINE Alu 2 301 -11 510 250 18 0 chr2 19390728 19390840 -231297014 - MER81 DNA DNA 0 114 1 2052 108 6 71 chr2 19391356 19391681 -231296173 - AluY SINE Alu -5 306 3 1979 210 40 62 chr2 19391880 19392460 -231295394 - L1MD3 LINE L1 -1 7994 7428 1356 195 4 12 chr2 19392743 19392984 -231294870 - MER8 DNA MER2_type 0 239 1 1924 116 58 69 chr2 19393019 19393398 -231294456 - THE1C LTR MaLR 0 375 1 489 333 18 12 chr2 19393912 19394083 -231293771 - MIR3 SINE MIR -21 187 16 2282 105 0 0 chr2 19395234 19395530 -231292324 + AluSg SINE Alu 1 296 -14 279 292 159 18 chr2 19397281 19397394 -231290460 + L2 LINE L2 3181 3309 -4 417 356 37 6 chr2 19398071 19398234 -231289620 + MIR SINE MIR 9 176 -86 193 336 18 45 chr2 19398405 19398515 -231289339 + L2 LINE L2 3008 3114 -158 495 286 148 5 chr2 19400096 19400306 -231287548 - MIR SINE MIR -14 248 9 264 239 109 11 chr2 19401118 19401210 -231286644 + MIR SINE MIR 35 135 -127 401 253 121 31 chr2 19401215 19401453 -231286401 - MIR SINE MIR 0 262 2 528 286 100 29 chr2 19402405 19402615 -231285239 - MIR SINE MIR -29 233 9 485 279 126 0 chr2 19403080 19403263 -231284591 + LTR33 LTR ERVL 3 208 -313 309 209 116 47 chr2 19403343 19403472 -231284382 + LTR33 LTR ERVL 384 521 0 241 264 11 58 chr2 19404036 19404123 -231283731 - MIR SINE MIR -94 114 32 1645 192 0 31 chr2 19404236 19404554 -231283300 + AluJo SINE Alu 1 308 -4 307 341 66 43 chr2 19405373 19405631 -231282223 - L3 LINE CR1 -9 1568 1305 716 263 158 15 chr2 19405702 19406044 -231281810 - L2 LINE L2 0 3313 2923 2297 122 0 3 chr2 19406187 19406491 -231281363 - AluSx SINE Alu -9 303 1 183 237 0 0 chr2 19407063 19407101 -231280753 + L3 LINE CR1 865 902 -675 468 310 141 17 chr2 19408191 19408481 -231279373 - L2 LINE L2 -77 3195 2870 226 228 18 0 chr2 19408876 19408933 -231278921 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 203 136 45 0 chr2 19408937 19408981 -231278873 + GA-rich Low_complexity Low_complexity 3 48 0 286 366 21 21 chr2 19409954 19410096 -231277758 + MIR3 SINE MIR 2 143 -65 219 69 0 0 chr2 19410688 19410717 -231277137 + (A)n Simple_repeat Simple_repeat 1 29 0 288 333 33 17 chr2 19411713 19411833 -231276021 + L3 LINE CR1 1271 1392 -185 252 196 0 0 chr2 19412479 19412525 -231275329 - MIR SINE MIR -115 147 102 280 278 60 76 chr2 19413432 19413605 -231274249 - MIR SINE MIR -68 140 22 23 0 0 0 chr2 19413756 19413779 -231274075 + AT_rich Low_complexity Low_complexity 1 23 0 268 241 211 15 chr2 19414262 19414395 -231273459 + MIR SINE MIR 100 258 -4 187 330 134 0 chr2 19414977 19415074 -231272780 - L2 LINE L2 -18 3254 3145 315 347 97 19 chr2 19416455 19416671 -231271183 + L2 LINE L2 3000 3232 -40 435 38 0 0 chr2 19416688 19416741 -231271113 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 372 22 0 0 chr2 19417529 19417574 -231270280 + (TC)n Simple_repeat Simple_repeat 1 45 0 413 302 11 2 chr2 19418149 19418260 -231269594 + MIR SINE MIR 5 116 -92 252 0 0 0 chr2 19418303 19418331 -231269523 + (TG)n Simple_repeat Simple_repeat 2 29 0 1172 297 53 10 chr2 19418333 19418919 -231268935 - L1MC4a LINE L1 -1899 5909 5299 946 306 40 55 chr2 19419303 19419908 -231267946 - ERVL LTR ERVL -4091 1673 1078 266 214 0 0 chr2 19420753 19420809 -231267045 - LTR33A LTR ERVL 0 523 468 1904 162 58 56 chr2 19421555 19421968 -231265886 - MLT2D LTR ERVL 0 414 1 203 281 101 76 chr2 19421970 19422208 -231265646 + L2 LINE L2 3029 3272 0 2577 60 0 13 chr2 19422326 19422640 -231265214 - AluY SINE Alu -1 310 1 189 234 0 78 chr2 19423535 19423599 -231264255 + MIR SINE MIR 66 124 -138 405 136 0 0 chr2 19424888 19424954 -231262900 + (TTTA)n Simple_repeat Simple_repeat 1 66 0 21 57 0 0 chr2 19425480 19425515 -231262339 + AT_rich Low_complexity Low_complexity 1 35 0 1504 169 43 66 chr2 19425524 19425825 -231262029 + AluSq SINE Alu 1 294 -19 728 260 80 72 chr2 19425848 19426225 -231261629 - MLT1I LTR MaLR -2 407 28 309 210 0 0 chr2 19426262 19426324 -231261530 + MER94 DNA DNA 8 69 -65 2398 92 0 3 chr2 19426436 19426742 -231261112 + AluSx SINE Alu 1 305 -7 1001 139 29 0 chr2 19426797 19426970 -231260884 + L1PA16 LINE L1 5958 6135 -31 318 353 8 8 chr2 19427265 19427384 -231260470 + MIR3 SINE MIR 13 131 -77 348 133 0 0 chr2 19428121 19428181 -231259673 + (CA)n Simple_repeat Simple_repeat 1 60 0 192 188 188 25 chr2 19428921 19429001 -231258853 - MIR SINE MIR -68 140 48 199 260 156 0 chr2 19429113 19429209 -231258645 + MIR SINE MIR 145 255 -7 3481 49 2 2 chr2 19429294 19429725 -231258129 + L1PA5 LINE L1 5724 6154 0 824 175 28 7 chr2 19430930 19431073 -231256781 + FRAM SINE Alu 1 146 -30 199 192 19 39 chr2 19431091 19431143 -231256711 - L3 LINE CR1 -15 1562 1512 188 181 111 83 chr2 19431221 19431293 -231256561 - L3 LINE CR1 -185 1392 1319 434 237 0 0 chr2 19433374 19433467 -231254387 - MER45A DNA AcHobo 0 178 86 263 329 102 29 chr2 19434131 19434268 -231253586 + MIR3 SINE MIR 55 201 -7 575 224 158 0 chr2 19434900 19435052 -231252802 + MER5A DNA MER1_type 14 189 0 778 230 63 0 chr2 19435062 19435236 -231252618 + MER5A DNA MER1_type 4 188 -1 313 326 244 0 chr2 19436001 19436136 -231251718 - MIR3 SINE MIR -9 199 32 205 347 27 53 chr2 19440498 19440648 -231247206 - MIR3 SINE MIR -62 146 1 1973 113 69 36 chr2 19441213 19441576 -231246278 - THE1C LTR MaLR 0 375 1 2435 126 28 14 chr2 19442947 19443305 -231244549 + THE1B LTR MaLR 1 363 -1 1744 168 7 0 chr2 19445562 19445842 -231242012 - AluJo SINE Alu -20 292 11 2301 109 7 0 chr2 19445861 19446164 -231241690 - AluSq SINE Alu -8 305 1 865 191 42 0 chr2 19446173 19446341 -231241513 - AluSg/x SINE Alu -17 295 121 750 107 10 0 chr2 19446496 19446599 -231241255 - AluSq/x SINE Alu -209 104 1 200 241 37 19 chr2 19446775 19446829 -231241025 + MIR SINE MIR 35 89 -119 3567 91 91 0 chr2 19447916 19448489 -231239365 + LTR24C LTR ERV1 10 634 -1 2438 102 0 0 chr2 19449725 19450030 -231237824 - AluSx SINE Alu -7 305 1 2931 112 90 56 chr2 19452327 19452815 -231235039 - L1MA6 LINE L1 0 6300 5785 261 0 0 0 chr2 19452815 19452844 -231235010 + (TG)n Simple_repeat Simple_repeat 2 30 0 2931 112 90 56 chr2 19452844 19452979 -231234875 - L1MA6 LINE L1 -515 5785 5656 354 278 102 29 chr2 19455419 19455624 -231232230 - L1ME LINE L1 -353 5768 5549 1122 217 86 50 chr2 19456056 19456475 -231231379 + MLT1C LTR MaLR 34 467 0 214 308 168 37 chr2 19456476 19456583 -231231271 - MIR SINE MIR -61 147 27 301 294 87 11 chr2 19456695 19456787 -231231067 + MIR SINE MIR 24 122 -86 2204 121 0 0 chr2 19457089 19457386 -231230468 - AluSx SINE Alu -15 297 1 401 220 30 0 chr2 19457463 19457563 -231230291 + Charlie5 DNA MER1_type 7 109 -2503 1861 147 0 34 chr2 19457571 19457887 -231229967 + AluJb SINE Alu 1 306 0 1156 134 71 45 chr2 19457974 19458242 -231229612 + Charlie5 DNA MER1_type 2270 2544 -68 249 224 0 30 chr2 19458243 19458310 -231229544 + MIR SINE MIR 71 135 -73 200 333 37 0 chr2 19459204 19459285 -231228569 - MIR SINE MIR -161 101 18 2157 103 0 4 chr2 19459303 19459634 -231228220 + AluSx SINE Alu 5 334 0 1819 132 186 14 chr2 19460368 19460733 -231227121 + MSTA LTR MaLR 1 428 0 204 327 53 9 chr2 19461007 19461120 -231226734 - MIR3 SINE MIR -25 183 66 701 172 5 115 chr2 19461179 19461371 -231226483 + MLT1C LTR MaLR 23 193 -274 266 242 0 0 chr2 19461394 19461456 -231226398 + MLT1C LTR MaLR 329 390 0 251 281 44 9 chr2 19462766 19462880 -231224974 - L2 LINE L2 -212 3060 2943 204 257 0 0 chr2 19464025 19464095 -231223759 + (TG)n Simple_repeat Simple_repeat 1 70 0 458 297 61 40 chr2 19467564 19467809 -231220045 + L1ME LINE L1 5265 5509 -612 1647 254 79 10 chr2 19467965 19468571 -231219283 + MER114 LTR ERV 1 648 0 10512 112 25 3 chr2 19469088 19470526 -231217328 - Tigger1 DNA MER2_type 0 2418 941 2758 135 48 25 chr2 19470526 19471001 -231216853 + MER66B LTR ERV1 1 486 0 10512 112 25 3 chr2 19471001 19471150 -231216704 - Tigger1 DNA MER2_type -1477 941 797 784 286 36 18 chr2 19471236 19471624 -231216230 + L1MEc LINE L1 1987 2381 -4015 5737 249 72 15 chr2 19472342 19474403 -231213451 + L1MEc LINE L1 2322 4500 -1715 1117 281 130 52 chr2 19474533 19474771 -231213083 - L2 LINE L2 -4 3309 3091 1853 154 0 24 chr2 19474771 19475063 -231212791 - AluJo SINE Alu -27 285 1 1117 281 130 52 chr2 19475063 19475660 -231212194 - L2 LINE L2 -222 3091 2361 2405 89 0 3 chr2 19475660 19475962 -231211892 + AluY SINE Alu 1 301 -10 1117 281 130 52 chr2 19475962 19476116 -231211738 - L2 LINE L2 -952 2361 2220 276 206 0 16 chr2 19476120 19476183 -231211671 + MER94 DNA DNA 1 62 -72 532 280 148 22 chr2 19476237 19476508 -231211346 - L2 LINE L2 -1081 2233 1929 1825 161 3 7 chr2 19476699 19476991 -231210863 + AluSx SINE Alu 5 295 -17 8088 20 0 0 chr2 19477022 19477988 -231209866 - L1P LINE L1 -1177 4969 4004 7916 19 0 0 chr2 19477988 19478958 -231208896 + L1PA2 LINE L1 5186 6155 0 938 238 50 21 chr2 19478998 19479238 -231208616 - MIR SINE MIR 0 262 16 1993 128 180 11 chr2 19479428 19479794 -231208060 - MSTA LTR MaLR 0 428 1 544 284 103 46 chr2 19480096 19480621 -231207233 - L1ME LINE L1 -302 5819 5265 566 335 80 84 chr2 19481729 19483152 -231204702 + L2 LINE L2 360 1776 -1538 368 240 109 22 chr2 19483412 19483595 -231204259 - L1MC5 LINE L1 -418 7543 7345 1591 210 164 48 chr2 19483595 19484296 -231203558 - L1MC5 LINE L1 -520 7441 6660 1059 297 89 81 chr2 19484302 19485380 -231202474 + L2 LINE L2 1793 2879 -435 388 313 46 8 chr2 19485705 19485836 -231202018 - MIR3 SINE MIR -27 181 46 247 279 29 29 chr2 19486451 19486555 -231201299 - LTR16A1 LTR ERVL -2 455 352 226 214 0 0 chr2 19487301 19487343 -231200511 + L2 LINE L2 3272 3313 0 231 218 23 11 chr2 19487357 19487444 -231200410 + GA-rich Low_complexity Low_complexity 1 88 0 * 493 94 24 12 chr2 19487443 19487528 -231200326 + (GGGAA)n Simple_repeat Simple_repeat 2 87 0 1406 263 44 44 chr2 19487547 19488045 -231199809 - MLT1K LTR MaLR -81 507 10 439 296 74 72 chr2 19488672 19489156 -231198698 + MLT1K LTR MaLR 88 572 -16 256 339 77 23 chr2 19489636 19489766 -231198088 - MIR3 SINE MIR -71 137 1 1612 217 23 45 chr2 19490399 19490869 -231196985 - MLT1C LTR MaLR -7 460 1 580 226 274 5 chr2 19491116 19491328 -231196526 - L2 LINE L2 0 3313 3045 316 239 186 18 chr2 19491446 19491613 -231196241 - L2 LINE L2 -620 2694 2500 2285 101 0 19 chr2 19492435 19492751 -231195103 + AluSg SINE Alu 1 310 0 2119 109 41 22 chr2 19492831 19493199 -231194655 - THE1C LTR MaLR 0 375 1 1300 185 88 69 chr2 19493245 19493678 -231194176 - LTR37B LTR ERV1 -21 447 7 460 91 81 20 chr2 19494928 19495027 -231192827 + L1MB8 LINE L1 6074 6178 0 1512 138 0 5 chr2 19495050 19495267 -231192587 + AluJb SINE Alu 86 301 -11 193 171 98 0 chr2 19496919 19496960 -231190894 + MIR SINE MIR 211 255 -7 562 274 111 0 chr2 19497327 19497561 -231190293 + L1MC4 LINE L1 7783 8042 0 24 0 0 0 chr2 19497624 19497648 -231190206 + AT_rich Low_complexity Low_complexity 1 24 0 238 203 14 29 chr2 19500544 19500613 -231187241 + (TA)n Simple_repeat Simple_repeat 1 68 0 193 125 31 0 chr2 19500840 19500872 -231186982 - MIR SINE MIR -63 145 113 404 220 79 37 chr2 19501591 19501805 -231186049 + L1MC5 LINE L1 7246 7468 -493 365 314 96 29 chr2 19503687 19503967 -231183887 + L1 LINE L1 4721 5019 -1127 1522 110 18 9 chr2 19504258 19504486 -231183368 + AluSq SINE Alu 1 230 -83 869 148 7 0 chr2 19504486 19504621 -231183233 - AluJb SINE Alu -176 136 1 197 386 0 0 chr2 19504639 19504709 -231183145 - L2 LINE L2 -405 2908 2839 546 174 174 0 chr2 19504755 19504945 -231182909 - Charlie4a DNA MER1_type -4 504 282 1420 219 56 23 chr2 19504945 19505288 -231182566 + L1MB2 LINE L1 3100 3465 -2681 2158 108 35 57 chr2 19505288 19505660 -231182194 - THE1B LTR MaLR 0 364 1 1420 219 56 23 chr2 19505660 19505800 -231182054 + L1MB2 LINE L1 3465 3599 -2547 * 3994 186 48 30 chr2 19505788 19505928 -231181926 + L1MB2 LINE L1 4241 4377 -1794 2120 130 3 22 chr2 19505928 19506244 -231181610 + AluSx SINE Alu 1 310 -2 3994 186 48 30 chr2 19506244 19507751 -231180103 + L1MB2 LINE L1 4377 5856 -315 459 0 0 0 chr2 19507751 19507802 -231180052 + (TGG)n Simple_repeat Simple_repeat 1 51 0 3994 186 48 30 chr2 19507802 19507879 -231179975 + L1MB2 LINE L1 5856 5930 -241 846 195 6 18 chr2 19507879 19508043 -231179811 + FRAM SINE Alu 1 162 -4 3994 186 48 30 chr2 19508043 19508100 -231179754 + L1MB2 LINE L1 5930 6170 -1 574 248 141 30 chr2 19508346 19508645 -231179209 + L1M4 LINE L1 3854 4185 -1961 479 251 56 5 chr2 19508703 19508898 -231178956 + L1M4 LINE L1 4656 4860 -1286 486 202 84 0 chr2 19508967 19509086 -231178768 + HAL1b LINE L1 965 1093 -255 2811 206 67 0 chr2 19509105 19509766 -231178088 - L1ME1 LINE L1 -29 6137 5433 1908 125 0 0 chr2 19509834 19510098 -231177756 - AluSg SINE Alu -10 300 37 314 190 99 33 chr2 19510113 19510234 -231177620 + HAL1b LINE L1 965 1093 -255 2510 63 0 13 chr2 19510312 19510627 -231177227 - AluY SINE Alu 0 311 1 1341 36 12 0 chr2 19515791 19515956 -231171898 + L1PA7 LINE L1 5982 6148 -6 22 70 0 0 chr2 19515962 19516005 -231171849 + AT_rich Low_complexity Low_complexity 1 43 0 29 28 0 0 chr2 19516476 19516512 -231171342 + AT_rich Low_complexity Low_complexity 1 36 0 382 77 0 0 chr2 19516663 19516715 -231171139 + L1MA4A LINE L1 5899 5950 -353 593 125 0 0 chr2 19516715 19516803 -231171051 + AluY SINE Alu 212 299 -12 3032 133 30 0 chr2 19516811 19517313 -231170541 + L1PA7 LINE L1 3 519 -5942 19393 111 16 41 chr2 19517415 19518469 -231169385 - L1P3 LINE L1 -2275 4186 3108 2517 80 0 3 chr2 19518469 19518780 -231169074 - AluY SINE Alu -1 310 1 19393 111 16 41 chr2 19518780 19521716 -231166138 - L1P3 LINE L1 -3353 3108 217 26688 81 7 7 chr2 19521816 19523279 -231164575 + L1PA7 LINE L1 1693 3155 -3314 2496 84 0 3 chr2 19523279 19523590 -231164264 + AluY SINE Alu 1 310 -1 26688 81 7 7 chr2 19523590 19526906 -231160948 + L1PA7 LINE L1 3155 6467 -2 3823 96 0 4 chr2 19526927 19527440 -231160414 + MER9 LTR ERVK 1 511 0 20498 70 8 7 chr2 19527440 19528466 -231159388 + HERVK9 LTR ERVK 1 1024 -4892 2395 65 0 0 chr2 19528466 19528757 -231159097 + AluY SINE Alu 1 291 -20 20498 70 8 7 chr2 19528757 19530512 -231157342 + HERVK9 LTR ERVK 1024 2786 -3130 1810 43 0 0 chr2 19530512 19530743 -231157111 + HERVK9 LTR ERVK 3711 3941 -1975 * 7499 80 4 9 chr2 19530742 19531801 -231156053 + HERVK9 LTR ERVK 4582 5634 -282 2167 71 0 0 chr2 19531897 19532179 -231155675 + HERVK9 LTR ERVK 5635 5916 0 3867 76 2 8 chr2 19532179 19532693 -231155161 + MER9 LTR ERVK 1 511 0 459 227 34 102 chr2 19532882 19532991 -231154863 - MIR SINE MIR -1 261 167 2412 77 0 3 chr2 19532991 19533288 -231154566 - AluY SINE Alu -15 296 1 459 227 34 102 chr2 19533288 19533354 -231154500 - MIR SINE MIR -95 167 98 26 0 0 0 chr2 19533425 19533451 -231154403 + AT_rich Low_complexity Low_complexity 1 26 0 347 253 52 71 chr2 19533924 19534078 -231153776 + L1ME4a LINE L1 5959 6109 -12 271 162 54 0 chr2 19534205 19534279 -231153575 + (TA)n Simple_repeat Simple_repeat 2 79 0 828 201 7 13 chr2 19534862 19535016 -231152838 - FRAM SINE Alu -10 156 4 21 0 0 0 chr2 19535023 19535044 -231152810 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 19537001 19537023 -231150831 + AT_rich Low_complexity Low_complexity 1 22 0 450 0 0 0 chr2 19538205 19538255 -231149599 + (CCA)n Simple_repeat Simple_repeat 3 52 0 382 292 104 5 chr2 19538482 19538684 -231149170 - L1ME4a LINE L1 -83 6038 5817 28 79 0 0 chr2 19538684 19538747 -231149107 + AT_rich Low_complexity Low_complexity 1 63 0 328 178 33 33 chr2 19539311 19539401 -231148453 - L1MC5 LINE L1 -181 7780 7691 25 31 0 0 chr2 19539483 19539515 -231148339 + AT_rich Low_complexity Low_complexity 1 32 0 430 224 0 24 chr2 19540572 19540657 -231147197 - L2 LINE L2 0 3313 3231 1519 180 50 44 chr2 19540723 19541085 -231146769 + MLT1A1 LTR MaLR 2 365 0 1100 191 39 14 chr2 19543224 19543506 -231144348 + HAL1b LINE L1 527 815 -533 286 230 201 14 chr2 19543556 19543695 -231144159 + HAL1b LINE L1 895 1059 -289 422 213 91 70 chr2 19543705 19543935 -231143919 + HAL1b LINE L1 1091 1325 -23 210 333 16 0 chr2 19543981 19544044 -231143810 - L2 LINE L2 -8 3264 3201 24 32 0 0 chr2 19544167 19544198 -231143656 + AT_rich Low_complexity Low_complexity 1 31 0 1542 156 10 46 chr2 19544251 19544553 -231143301 + AluJb SINE Alu 1 291 -21 1654 177 54 49 chr2 19544742 19545148 -231142706 + LTR52 LTR ERVL 2 409 -12 342 251 59 148 chr2 19545605 19545876 -231141978 - MIR SINE MIR -14 248 2 516 238 118 48 chr2 19546071 19546386 -231141468 - L1MC5 LINE L1 -20 7941 7605 1885 194 40 40 chr2 19547183 19547652 -231140202 + Charlie7 DNA MER1_type 266 734 -1878 318 186 150 0 chr2 19547661 19547774 -231140080 + Charlie7 DNA MER1_type 2440 2569 -43 646 208 16 0 chr2 19552154 19552279 -231135575 - FLAM_A SINE Alu -6 127 1 25 51 0 0 chr2 19552286 19552325 -231135529 + AT_rich Low_complexity Low_complexity 1 39 0 364 231 105 91 chr2 19552489 19552632 -231135222 - L2 LINE L2 0 3313 3169 903 180 6 6 chr2 19552806 19552973 -231134881 + L1MD2 LINE L1 5834 6000 -359 1074 96 0 0 chr2 19552974 19553120 -231134734 + AluSg/x SINE Alu 165 310 -2 609 234 106 51 chr2 19553138 19553373 -231134481 + L1MD2 LINE L1 6112 6359 0 765 337 139 47 chr2 19553490 19553656 -231134198 - L2 LINE L2 -541 2773 2624 1051 205 0 28 chr2 19553656 19553871 -231133983 - MER3 DNA MER1_type 0 209 1 765 337 139 47 chr2 19553871 19554697 -231133157 - L2 LINE L2 -690 2624 1690 285 299 46 11 chr2 19554775 19554862 -231132992 + L2 LINE L2 3174 3263 -9 289 375 56 7 chr2 19554909 19555080 -231132774 + MIR SINE MIR 16 192 -58 1395 135 4 18 chr2 19556195 19556424 -231131430 - L1PB4 LINE L1 -5 6151 5926 300 227 383 0 chr2 19556425 19556553 -231131301 + MIR SINE MIR 85 261 -1 184 316 92 13 chr2 19556554 19556630 -231131224 - MIR SINE MIR -106 156 75 1195 0 0 0 chr2 19556960 19557093 -231130761 - AluYa5/8 SINE Alu -5 306 174 24 77 0 0 chr2 19557840 19557892 -231129962 + AT_rich Low_complexity Low_complexity 1 52 0 287 268 14 0 chr2 19558191 19558262 -231129592 - MIR3 SINE MIR -4 204 133 2706 152 41 10 chr2 19558339 19559110 -231128744 + L1M4 LINE L1 4976 5777 -407 2080 87 4 4 chr2 19559153 19559428 -231128426 - AluSc SINE Alu -34 275 1 340 303 0 0 chr2 19559620 19559709 -231128145 - MIR SINE MIR -94 168 80 573 258 94 82 chr2 19560561 19560794 -231127060 + MIR SINE MIR 12 247 -15 2493 30 10 0 chr2 19560797 19561095 -231126759 - AluY SINE Alu -10 301 1 825 223 135 9 chr2 19561113 19561328 -231126526 - MIR SINE MIR -9 253 12 2167 115 0 0 chr2 19561733 19562029 -231125825 - AluSx SINE Alu -16 296 1 229 328 148 39 chr2 19562419 19562547 -231125307 + L2 LINE L2 2917 3058 -214 253 292 0 0 chr2 19562568 19562633 -231125221 + L2 LINE L2 3248 3312 -1 269 294 29 0 chr2 19562691 19562759 -231125095 + L2 LINE L2 3203 3272 0 402 231 211 14 chr2 19562796 19562943 -231124911 - L2 LINE L2 -1 3271 3096 192 179 0 0 chr2 19563640 19563679 -231124175 + (TA)n Simple_repeat Simple_repeat 2 40 0 486 269 23 0 chr2 19564493 19564623 -231123231 + MER94 DNA DNA 1 133 -1 8922 105 8 7 chr2 19565084 19566384 -231121470 + HSMAR2 DNA Mariner 1 1301 -1 288 131 16 16 chr2 19566847 19566908 -231120946 + L1MA2 LINE L1 6244 6304 0 25 83 0 0 chr2 19566929 19566989 -231120865 + AT_rich Low_complexity Low_complexity 1 60 0 5144 227 120 74 chr2 19567057 19567898 -231119956 - HAL1 LINE L1 0 2507 1705 1949 95 4 0 chr2 19567898 19568191 -231119663 - AluSx SINE Alu 0 323 30 5144 227 120 74 chr2 19568191 19568548 -231119306 - HAL1 LINE L1 -802 1705 1366 1955 115 0 0 chr2 19568548 19568826 -231119028 - AluSx SINE Alu 0 312 35 5144 227 120 74 chr2 19568826 19569108 -231118746 - HAL1 LINE L1 -1141 1366 1098 2148 103 10 0 chr2 19569108 19569399 -231118455 - AluSx SINE Alu -18 294 1 5144 227 120 74 chr2 19569399 19570306 -231117548 - HAL1 LINE L1 -1409 1098 9 259 321 61 36 chr2 19571498 19571663 -231116191 - HAL1 LINE L1 -1 2506 2338 52 41 0 0 chr2 19571727 19571800 -231116054 + AT_rich Low_complexity Low_complexity 1 73 0 3158 162 131 111 chr2 19571880 19572475 -231115379 - L1MC3 LINE L1 -1 7784 7069 249 215 86 65 chr2 19572475 19572568 -231115286 - MLT1F1 LTR MaLR -442 125 31 3158 162 131 111 chr2 19572568 19572881 -231114973 - L1MC3 LINE L1 -716 7069 6764 1428 241 116 19 chr2 19573007 19573472 -231114382 + LTR33 LTR ERVL 1 510 -11 2441 67 0 0 chr2 19573924 19574222 -231113632 - AluY SINE Alu -13 298 1 525 194 91 24 chr2 19574297 19574462 -231113392 - MER104 DNA MER2_type -1 179 4 35 41 0 0 chr2 19575185 19575234 -231112620 + AT_rich Low_complexity Low_complexity 1 49 0 1205 224 142 17 chr2 19575425 19575777 -231112077 + MSTD LTR MaLR 1 396 0 418 298 92 9 chr2 19576000 19576218 -231111636 - MIR SINE MIR -6 256 21 26 30 0 0 chr2 19576882 19576915 -231110939 + AT_rich Low_complexity Low_complexity 1 33 0 26 0 0 0 chr2 19577151 19577177 -231110677 + AT_rich Low_complexity Low_complexity 1 26 0 32 57 0 0 chr2 19577529 19577582 -231110272 + AT_rich Low_complexity Low_complexity 1 53 0 1832 141 35 0 chr2 19578001 19578285 -231109569 + AluJb SINE Alu 1 294 -18 2233 98 3 0 chr2 19578304 19578609 -231109245 + AluY SINE Alu 1 306 -5 193 315 141 34 chr2 19578926 19579075 -231108779 + MIR SINE MIR 55 219 -43 22 35 0 0 chr2 19579529 19579558 -231108296 + AT_rich Low_complexity Low_complexity 1 29 0 232 186 23 0 chr2 19579956 19579999 -231107855 - L2 LINE L2 0 3313 3270 1039 320 107 85 chr2 19580022 19580596 -231107258 + L2 LINE L2 1314 1874 -1398 656 137 0 17 chr2 19580596 19580713 -231107141 + L1PB4 LINE L1 6041 6155 -1 565 123 0 0 chr2 19580720 19580801 -231107053 + MLT1B LTR MaLR 260 340 -50 1039 320 107 85 chr2 19580801 19580997 -231106857 + L2 LINE L2 1879 2069 -1203 1714 177 0 39 chr2 19580997 19581307 -231106547 - AluJo SINE Alu -14 298 1 1039 320 107 85 chr2 19581307 19582352 -231105502 + L2 LINE L2 2069 3271 -1 336 24 0 0 chr2 19582355 19582396 -231105458 + (CA)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr2 19582413 19582445 -231105409 + AT_rich Low_complexity Low_complexity 1 32 0 233 98 24 0 chr2 19583293 19583334 -231104520 + (TTTC)n Simple_repeat Simple_repeat 4 45 0 306 0 0 0 chr2 19583948 19583982 -231103872 + (CA)n Simple_repeat Simple_repeat 2 35 0 419 309 32 0 chr2 19584366 19584489 -231103365 - L2 LINE L2 0 3272 3146 1030 139 58 97 chr2 19585466 19585698 -231102156 - L1MC4 LINE L1 -190 7852 7629 1709 188 0 3 chr2 19585698 19585991 -231101863 - AluJo SINE Alu -18 294 3 1030 139 58 97 chr2 19585991 19586017 -231101837 - L1MC4 LINE L1 -413 7629 7604 2045 135 77 0 chr2 19586186 19586526 -231101328 + MER47A DNA MER2_type 1 366 0 791 343 34 66 chr2 19587104 19587646 -231100208 - L2 LINE L2 0 3272 2734 402 21 0 0 chr2 19588177 19588224 -231099630 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 19589755 19589775 -231098079 + (A)n Simple_repeat Simple_repeat 1 20 0 2224 102 0 40 chr2 19589776 19590100 -231097754 + AluSx SINE Alu 1 311 -1 940 287 200 35 chr2 19590105 19590791 -231097063 - L2 LINE L2 -622 2692 1894 825 272 59 25 chr2 19590985 19591309 -231096545 + L1ME4a LINE L1 5539 5873 -248 197 300 38 38 chr2 19591337 19591417 -231096437 + L2 LINE L2 3234 3313 0 2480 75 0 3 chr2 19591716 19592021 -231095833 + AluY SINE Alu 1 304 -7 219 229 0 0 chr2 19592045 19592106 -231095748 + (TA)n Simple_repeat Simple_repeat 2 62 0 550 263 175 18 chr2 19592238 19592455 -231095399 + MIR SINE MIR 9 259 -3 529 256 167 0 chr2 19592480 19592636 -231095218 + MER5A DNA MER1_type 2 183 -6 239 310 21 84 chr2 19592641 19592783 -231095071 - MIR SINE MIR -26 182 49 404 64 0 0 chr2 19596435 19596482 -231091372 + Alu SINE Alu 17 63 -255 584 273 142 14 chr2 19597636 19597911 -231089943 - Charlie2 DNA MER1_type -2471 311 2 297 202 30 40 chr2 19598779 19598878 -231088976 + L1MC5 LINE L1 7832 7929 -32 1956 152 0 10 chr2 19598969 19599278 -231088576 + AluJo SINE Alu 1 306 -6 2233 125 0 0 chr2 19599333 19599645 -231088209 + AluSx SINE Alu 1 312 0 702 153 129 6 chr2 19600392 19600503 -231087351 + L1MB3 LINE L1 4385 4524 -1622 186 71 0 0 chr2 19600503 19600531 -231087323 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 702 153 129 6 chr2 19600531 19600582 -231087272 + L1MB3 LINE L1 4524 4567 -1579 250 196 289 0 chr2 19600580 19600677 -231087177 + L1MB3 LINE L1 5382 5506 -656 * 1294 142 33 0 chr2 19600839 19601050 -231086804 + L1MB3 LINE L1 5966 6183 0 186 200 133 76 chr2 19601096 19601201 -231086653 - L2 LINE L2 -479 2835 2725 219 69 0 0 chr2 19601926 19601955 -231085899 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 30 chr2 19602619 19602636 -231085218 + AT_rich Low_complexity Low_complexity 1 18 -14 1987 155 3 3 chr2 19602636 19602939 -231084915 + AluJb SINE Alu 1 303 -9 22 0 0 30 chr2 19602939 19602954 -231084900 + AT_rich Low_complexity Low_complexity 18 32 0 481 175 117 33 chr2 19603020 19603140 -231084714 + MIR SINE MIR 1 130 -132 201 333 16 0 chr2 19603163 19603226 -231084628 + L2 LINE L2 3233 3296 -17 216 0 0 0 chr2 19603789 19603813 -231084041 + (A)n Simple_repeat Simple_repeat 1 24 0 201 261 148 23 chr2 19605071 19605159 -231082695 - MIR3 SINE MIR 0 208 110 2648 183 71 23 chr2 19605261 19605836 -231082018 - L1MC4a LINE L1 0 7808 7206 279 0 0 0 chr2 19606324 19606355 -231081499 + (CA)n Simple_repeat Simple_repeat 2 32 0 330 326 118 0 chr2 19606369 19606513 -231081341 + MIR3 SINE MIR 19 179 -29 1364 197 42 28 chr2 19606780 19607064 -231080790 - AluJo SINE Alu -24 288 1 223 244 0 0 chr2 19609738 19609779 -231078075 + (CACG)n Simple_repeat Simple_repeat 3 43 0 2368 71 31 0 chr2 19611091 19611385 -231076469 + AluY SINE Alu 1 303 -8 2294 82 0 3 chr2 19611403 19611694 -231076160 + AluSq SINE Alu 3 292 -21 239 296 93 28 chr2 19611834 19611942 -231075912 - L2 LINE L2 0 3313 3199 2229 120 0 0 chr2 19612119 19612418 -231075436 - AluSx SINE Alu -13 299 1 403 209 180 22 chr2 19612791 19612934 -231074920 - MIR SINE MIR -64 144 25 1856 156 3 13 chr2 19613100 19613402 -231074452 + AluJo SINE Alu 3 301 -11 2981 67 0 0 chr2 19613448 19613804 -231074050 + L1PA8 LINE L1 5806 6161 -11 2391 132 25 35 chr2 19613820 19614223 -231073631 + MER4E LTR ERV1 340 738 -28 2119 194 72 33 chr2 19614522 19615007 -231072847 + MLT1D LTR MaLR 1 504 -1 232 250 130 22 chr2 19616333 19616425 -231071429 + MIR SINE MIR 30 131 -77 25 0 0 0 chr2 19616755 19616780 -231071074 + GC_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 19616850 19616881 -231070973 + GC_rich Low_complexity Low_complexity 1 31 0 244 353 108 24 chr2 19617558 19617725 -231070129 - L2 LINE L2 -100 3172 2992 2039 171 28 7 chr2 19617809 19618214 -231069640 + L1MB3 LINE L1 5681 6087 -64 471 246 11 94 chr2 19618335 19618390 -231069464 + LTR67 LTR ERVL 2 60 -497 3228 143 11 46 chr2 19618390 19618929 -231068925 - MLT2B1 LTR ERVL 0 520 1 471 246 11 94 chr2 19618929 19619064 -231068790 + LTR67 LTR ERVL 60 176 -381 445 285 28 28 chr2 19619060 19619204 -231068650 + LTR67 LTR ERVL 337 480 -77 * 414 218 135 53 chr2 19619204 19619374 -231068480 + MER91B DNA MER1_type 2 185 -5 1757 167 0 61 chr2 19619399 19619729 -231068125 - AluJo SINE Alu -2 310 1 21 0 0 0 chr2 19620348 19620369 -231067485 + AT_rich Low_complexity Low_complexity 1 21 0 285 257 316 27 chr2 19620558 19620745 -231067109 - MLT1J LTR MaLR -172 339 99 30 0 0 0 chr2 19621340 19621370 -231066484 + AT_rich Low_complexity Low_complexity 1 30 0 1790 157 21 11 chr2 19621373 19621654 -231066200 + AluJo SINE Alu 1 284 -28 337 241 25 135 chr2 19622160 19622260 -231065594 + MER112 DNA MER1_type 8 67 -193 2009 103 3 51 chr2 19622260 19622571 -231065283 - AluY SINE Alu -15 296 1 337 241 25 135 chr2 19622571 19622715 -231065139 + MER112 DNA MER1_type 67 225 -35 190 333 0 15 chr2 19622858 19622924 -231064930 + L2 LINE L2 3188 3252 -61 894 259 92 14 chr2 19623414 19623708 -231064146 - MLT1I LTR MaLR -2 407 91 311 246 48 24 chr2 19624356 19624482 -231063372 - MER5A DNA MER1_type 0 189 61 2582 124 22 0 chr2 19624487 19624843 -231063011 - THE1B LTR MaLR 0 364 1 11415 110 7 33 chr2 19624843 19626464 -231061390 - THE1B-int LTR MaLR 0 1580 2 2562 124 22 0 chr2 19626484 19626840 -231061014 - THE1B LTR MaLR 0 364 1 910 265 152 7 chr2 19627425 19627859 -231059995 - L1ME4a LINE L1 -1 6120 5624 211 368 60 40 chr2 19627896 19628198 -231059656 + L2 LINE L2 2179 2486 -828 1402 256 30 57 chr2 19628323 19628720 -231059134 + L1MEc LINE L1 1262 1641 -4755 2077 88 0 0 chr2 19628720 19628980 -231058874 - AluSg SINE Alu -16 294 35 1402 256 30 57 chr2 19628980 19629145 -231058709 + L1MEc LINE L1 1641 1809 -4587 855 243 28 0 chr2 19629174 19629355 -231058499 + AluJo SINE Alu 115 300 -12 2116 183 34 105 chr2 19629523 19629914 -231057940 + MER44D DNA MER2_type 4 396 -2091 8083 29 5 0 chr2 19629914 19631258 -231056596 + L1PA3 LINE L1 4808 6155 0 2116 183 34 105 chr2 19631258 19631455 -231056399 + MER44D DNA MER2_type 396 605 0 319 335 26 42 chr2 19631618 19631809 -231056045 - MIR SINE MIR -64 198 11 1228 135 96 0 chr2 19632442 19632650 -231055204 - L1PA15-16 LINE L1 -4222 2627 2400 940 138 0 0 chr2 19632650 19632780 -231055074 - AluSq/x SINE Alu -183 130 1 8531 160 45 33 chr2 19632783 19634341 -231053513 + L1PA15 LINE L1 3473 5011 -1154 2490 121 81 8 chr2 19634341 19634738 -231053116 - MSTA LTR MaLR -2 426 1 8531 160 45 33 chr2 19634738 19635038 -231052816 + L1PA15 LINE L1 5011 5306 -859 203 0 37 0 chr2 19635038 19635065 -231052789 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8531 160 45 33 chr2 19635065 19635083 -231052771 + L1PA15 LINE L1 5306 5322 -843 2221 116 0 3 chr2 19635083 19635385 -231052469 + AluSx SINE Alu 1 301 -11 8531 160 45 33 chr2 19635385 19636185 -231051669 + L1PA15 LINE L1 5322 6165 0 1989 173 9 9 chr2 19636332 19636667 -231051187 + MER2 DNA MER2_type 1 335 -10 192 271 51 0 chr2 19639767 19639826 -231048028 - L2 LINE L2 -4 3309 3248 290 279 13 0 chr2 19640640 19640719 -231047135 + L2 LINE L2 3193 3272 0 26 0 0 0 chr2 19641841 19641867 -231045987 + AT_rich Low_complexity Low_complexity 1 26 0 1814 126 4 0 chr2 19642578 19642825 -231045029 - AluSx SINE Alu -12 300 53 682 229 0 0 chr2 19642852 19642974 -231044880 + FLAM_C SINE Alu 5 126 -17 2127 123 14 0 chr2 19643076 19643368 -231044486 - AluSx SINE Alu -15 297 2 1153 213 161 0 chr2 19643624 19643873 -231043981 + AluJo SINE Alu 1 289 -13 21 36 0 0 chr2 19643874 19643902 -231043952 + AT_rich Low_complexity Low_complexity 1 28 0 2177 84 38 3 chr2 19643926 19644213 -231043641 + AluSp SINE Alu 1 297 -16 788 203 0 0 chr2 19644213 19644351 -231043503 - MLT1A1 LTR MaLR -227 138 1 1636 190 64 0 chr2 19644666 19644993 -231042861 + MER7A DNA MER2_type 1 346 0 30 45 0 0 chr2 19645334 19645378 -231042476 + AT_rich Low_complexity Low_complexity 1 44 0 180 344 21 10 chr2 19645482 19645578 -231042276 - L3 LINE CR1 -5 1572 1476 279 79 0 0 chr2 19645670 19645708 -231042146 + (TG)n Simple_repeat Simple_repeat 1 38 0 1788 154 4 4 chr2 19645710 19645989 -231041865 - AluSx SINE Alu -33 279 1 453 320 190 23 chr2 19646016 19646286 -231041568 - L3 LINE CR1 -291 1286 1062 843 174 0 0 chr2 19646286 19646418 -231041436 - FLAM_C SINE Alu -1 132 1 453 320 190 23 chr2 19646418 19646722 -231041132 - L3 LINE CR1 -515 1062 616 187 352 71 36 chr2 19646792 19647045 -231040809 - L3 LINE CR1 -1131 446 185 1002 81 0 0 chr2 19647106 19647230 -231040624 - AluSg/x SINE Alu -25 287 164 960 136 0 0 chr2 19647231 19647363 -231040491 - AluSg/x SINE Alu -17 295 164 2205 116 3 3 chr2 19647365 19647667 -231040187 - AluSx SINE Alu -10 302 1 428 303 81 11 chr2 19647857 19648042 -231039812 - MIR SINE MIR -6 256 59 554 156 73 18 chr2 19648651 19648760 -231039094 + FLAM_A SINE Alu 17 131 -11 840 153 0 0 chr2 19649071 19649195 -231038659 - FLAM_C SINE Alu -18 125 2 898 161 87 0 chr2 19649472 19649633 -231038221 + FAM SINE Alu 1 175 0 2774 45 0 23 chr2 19650161 19650514 -231037340 + L1PA6 LINE L1 5808 6152 -2 904 152 0 36 chr2 19650648 19650813 -231037041 - AluJb SINE Alu -21 291 133 575 112 49 0 chr2 19650813 19650956 -231036898 + (TA)n Simple_repeat Simple_repeat 2 151 0 802 99 54 0 chr2 19650959 19651070 -231036784 - AluJb SINE Alu -187 125 9 2329 93 3 3 chr2 19651260 19651561 -231036293 + AluSc SINE Alu 1 301 -8 2825 19 0 0 chr2 19651561 19651869 -231035985 + AluYb8 SINE Alu 1 308 -10 334 225 19 2 chr2 19651915 19652015 -231035839 + L1MC5 LINE L1 7832 8041 -1 220 234 78 0 chr2 19652045 19652109 -231035745 - L2 LINE L2 -307 2965 2897 218 307 53 18 chr2 19653932 19654046 -231033808 - L2 LINE L2 -1903 1411 1294 707 196 68 41 chr2 19656669 19656888 -231030966 + LTR37A LTR ERV1 200 424 -2 227 279 16 0 chr2 19657025 19657086 -231030768 + L2 LINE L2 3160 3221 -92 294 268 198 6 chr2 19657262 19657419 -231030435 - MIR SINE MIR -25 237 51 612 216 12 54 chr2 19657427 19657594 -231030260 - MER5B DNA MER1_type 0 178 19 2571 68 0 3 chr2 19657678 19657985 -231029869 + AluSp SINE Alu 1 306 -7 1891 136 22 44 chr2 19658141 19658458 -231029396 + LTR32 LTR ERVL 22 331 -140 753 163 6 84 chr2 19658559 19658725 -231029129 + LTR32 LTR ERVL 319 471 0 251 281 98 34 chr2 19659175 19659410 -231028444 + L2 LINE L2 1917 2166 -1148 652 103 0 0 chr2 19659448 19659535 -231028319 - MSTA LTR MaLR 0 428 342 1752 169 23 7 chr2 19659562 19659863 -231027991 + AluSx SINE Alu 1 306 -6 2470 241 97 21 chr2 19659911 19660998 -231026856 + HAL1 LINE L1 673 1881 -626 1311 246 80 44 chr2 19661043 19661632 -231026222 + HAL1 LINE L1 1690 2299 -208 4139 135 19 56 chr2 19661634 19662405 -231025449 + L1MA5 LINE L1 5558 6300 0 352 196 21 0 chr2 19662425 19662499 -231025355 + AluJ/FLAM SINE Alu 2 63 -239 * 4306 163 30 57 chr2 19662493 19663527 -231024327 + Charlie1 DNA MER1_type 1755 2760 -1 846 136 0 0 chr2 19663686 19663804 -231024050 - FLAM_C SINE Alu -25 118 1 2148 156 40 3 chr2 19663831 19664177 -231023677 - MLT1A1 LTR MaLR -6 359 1 206 238 0 0 chr2 19664250 19664292 -231023562 + MIR SINE MIR 108 149 -113 705 239 48 0 chr2 19665040 19665207 -231022647 - MLT1C LTR MaLR 0 467 293 2479 90 8 8 chr2 19665224 19665578 -231022276 - L1PA11 LINE L1 0 6174 5821 361 228 51 0 chr2 19665856 19665935 -231021919 - MLT1A1 LTR MaLR 0 365 283 255 125 0 0 chr2 19667277 19667317 -231020537 + (A)n Simple_repeat Simple_repeat 1 40 0 2284 92 89 15 chr2 19667358 19667696 -231020158 + THE1B LTR MaLR 2 364 0 528 16 0 0 chr2 19668131 19668192 -231019662 + (TATG)n Simple_repeat Simple_repeat 2 62 0 836 72 0 0 chr2 19668192 19668289 -231019565 - AluSc SINE Alu -27 282 186 429 292 20 55 chr2 19668326 19668528 -231019326 + MIR3 SINE MIR 4 198 -10 958 236 71 63 chr2 19668953 19669347 -231018507 + MLT2C1 LTR ERVL 1 397 0 2875 220 70 16 chr2 19671127 19671801 -231016053 - L1ME1 LINE L1 -5 6161 5444 2610 91 89 5 chr2 19671801 19672196 -231015658 + MSTA LTR MaLR 1 428 0 2875 220 70 16 chr2 19672196 19672253 -231015601 - L1ME1 LINE L1 -722 5444 5391 407 172 141 10 chr2 19672362 19672461 -231015393 + L1MC4a LINE L1 5669 5780 -2028 1347 213 60 81 chr2 19672463 19672932 -231014922 - MLT2C2 LTR ERVL 0 464 6 2379 106 0 0 chr2 19672937 19673240 -231014614 + AluSc SINE Alu 1 303 -6 2030 128 0 3 chr2 19673247 19673571 -231014283 + AluSg SINE Alu 1 323 0 324 209 29 101 chr2 19673585 19673625 -231014229 + L1MC4a LINE L1 5791 5832 -1976 2288 102 3 0 chr2 19673625 19673919 -231013935 + AluSx SINE Alu 2 296 -16 324 209 29 101 chr2 19673919 19674017 -231013837 + L1MC4a LINE L1 5832 5919 -1889 22 0 0 0 chr2 19674017 19674039 -231013815 + AT_rich Low_complexity Low_complexity 1 22 0 2918 116 24 0 chr2 19674039 19674462 -231013392 - MER7C DNA MER2_type 0 602 170 985 72 14 29 chr2 19674462 19674601 -231013253 - MER1B DNA MER1_type 0 339 203 1528 143 0 0 chr2 19674634 19674850 -231013004 - MER1B DNA MER1_type -81 216 1 760 193 93 0 chr2 19674850 19675000 -231012854 - MER7C DNA MER2_type -425 177 14 2020 108 0 94 chr2 19675060 19675402 -231012452 + AluSg SINE Alu 1 310 0 1818 163 10 27 chr2 19676883 19677183 -231010671 + AluJo SINE Alu 1 295 -17 390 239 91 34 chr2 19677385 19677594 -231010260 + L2 LINE L2 2435 2655 -659 378 185 23 123 chr2 19677983 19678113 -231009741 + LTR4 LTR ERV1 1 117 -479 661 251 14 28 chr2 19678393 19678608 -231009246 + LTR4 LTR ERV1 385 596 0 588 263 0 0 chr2 19678883 19678997 -231008857 + MER81 DNA DNA 1 114 0 365 250 46 61 chr2 19679926 19680090 -231007764 + L1M4 LINE L1 2197 2350 -3796 1902 162 0 3 chr2 19680090 19680380 -231007474 - AluJo SINE Alu -23 289 1 365 250 46 61 chr2 19680380 19680509 -231007345 + L1M4 LINE L1 2350 2479 -3667 2291 225 50 16 chr2 19681603 19682105 -231005749 + LTR40a LTR ERVL 1 519 0 182 277 0 0 chr2 19682176 19682223 -231005631 + L2 LINE L2 3214 3260 -12 192 256 144 40 chr2 19684993 19685118 -231002736 - MIR SINE MIR -56 206 69 275 183 140 85 chr2 19685532 19685595 -231002259 - LTR33 LTR ERVL -53 468 410 665 137 9 142 chr2 19685595 19685743 -231002111 + MER53 DNA DNA 4 117 -72 2409 85 0 3 chr2 19685743 19686038 -231001816 + AluSp SINE Alu 1 294 -19 665 137 9 142 chr2 19686038 19686101 -231001753 + MER53 DNA DNA 117 187 -2 275 183 140 85 chr2 19686101 19686201 -231001653 - LTR33 LTR ERVL -111 410 296 776 215 112 18 chr2 19686345 19686602 -231001252 + MSTD LTR MaLR 1 339 -57 726 132 0 0 chr2 19686607 19686713 -231001141 - AluSg/x SINE Alu -1 311 206 2594 108 58 23 chr2 19686713 19687148 -231000706 + LTR7 LTR ERV1 1 450 0 14333 111 11 19 chr2 19687170 19690458 -230997396 + HERVH LTR ERV1 4 3736 -3977 6317 126 25 4 chr2 19690451 19691454 -230996400 + HERVH LTR ERV1 3962 4992 -2287 * 2617 90 34 15 chr2 19691433 19691843 -230996011 + HERVH LTR ERV1 7296 7713 0 * 2360 113 55 25 chr2 19691843 19692278 -230995576 + LTR7 LTR ERV1 1 448 -2 1492 130 5 0 chr2 19692280 19692488 -230995366 - AluSq SINE Alu -104 209 1 446 116 0 0 chr2 19692489 19692558 -230995296 + MSTD LTR MaLR 328 396 0 241 237 172 43 chr2 19692558 19692651 -230995203 - LTR33 LTR ERVL -416 105 1 263 386 18 0 chr2 19692921 19693035 -230994819 - MIR3 SINE MIR -9 199 84 2169 120 47 3 chr2 19693752 19694111 -230993743 + LTR8A LTR ERV1 1 375 -352 23 0 0 0 chr2 19694706 19694729 -230993125 + AT_rich Low_complexity Low_complexity 1 23 0 309 141 13 26 chr2 19695146 19695224 -230992630 + GA-rich Low_complexity Low_complexity 4 80 0 235 263 62 94 chr2 19696423 19696583 -230991271 + MER91A DNA MER1_type 40 194 -2 248 297 40 0 chr2 19697369 19697443 -230990411 + MLT1L LTR MaLR 114 190 -425 180 374 10 10 chr2 19698632 19698731 -230989123 - L2 LINE L2 -206 3066 2968 1075 271 61 44 chr2 19698954 19699430 -230988424 - HAL1 LINE L1 -135 2372 1889 1973 193 92 22 chr2 19699441 19699949 -230987905 - HAL1 LINE L1 -693 1814 1271 278 300 56 0 chr2 19700316 19700406 -230987448 + MIR3 SINE MIR 113 207 -1 1794 179 0 3 chr2 19700964 19701249 -230986605 + AluJo SINE Alu 1 284 -28 2666 51 0 3 chr2 19701348 19701660 -230986194 + AluY SINE Alu 1 311 0 1133 191 106 34 chr2 19702702 19702844 -230985010 - Charlie1b DNA MER1_type -2272 489 359 2201 103 12 38 chr2 19702844 19703163 -230984691 - AluSx SINE Alu -1 311 1 1133 191 106 34 chr2 19703163 19703398 -230984456 - Charlie1b DNA MER1_type -2402 359 85 296 272 33 33 chr2 19703438 19703530 -230984324 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 19703555 19703873 -230983981 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 19703963 19703993 -230983861 + (T)n Simple_repeat Simple_repeat 1 30 0 758 215 112 18 chr2 19704782 19705039 -230982815 + MSTD LTR MaLR 1 339 -57 1941 135 16 38 chr2 19705044 19705362 -230982492 - AluSx SINE Alu -1 311 1 903 185 86 22 chr2 19705365 19705597 -230982257 - Charlie1b DNA MER1_type -192 331 85 296 272 33 33 chr2 19705637 19705729 -230982125 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 19705754 19706072 -230981782 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 19706162 19706192 -230981662 + (T)n Simple_repeat Simple_repeat 1 30 0 388 259 118 18 chr2 19706895 19707065 -230980789 + MIR SINE MIR 28 214 -48 219 222 51 86 chr2 19707065 19707182 -230980672 + MIR SINE MIR 26 138 -70 * 1071 264 49 30 chr2 19707156 19707752 -230980102 + L2 LINE L2 2518 3124 -189 302 306 35 0 chr2 19707802 19707887 -230979967 + MIR3 SINE MIR 114 201 -7 269 264 56 0 chr2 19708170 19708242 -230979612 + Charlie1 DNA MER1_type 1 76 -2685 184 302 146 0 chr2 19708259 19708355 -230979499 + L2 LINE L2 2596 2705 -609 374 153 133 0 chr2 19708467 19708565 -230979289 - MER65A LTR ERV1 0 445 335 * 482 206 9 0 chr2 19708537 19708644 -230979210 + MER65A LTR ERV1 338 445 0 1486 127 6 106 chr2 19708661 19708723 -230979131 - MER65A LTR ERV1 -154 291 224 1790 155 49 11 chr2 19708723 19709007 -230978847 + AluJo SINE Alu 1 295 -17 818 54 18 0 chr2 19709007 19709118 -230978736 + (GGAGAA)n Simple_repeat Simple_repeat 3 115 0 1486 127 6 106 chr2 19709118 19709376 -230978478 - MER65A LTR ERV1 -219 226 2 4106 190 69 1 chr2 19709377 19710247 -230977607 - MER65A-int LTR ERV1 0 4871 3943 2249 113 7 0 chr2 19710442 19710742 -230977112 - AluSx SINE Alu -10 302 1 180 304 98 22 chr2 19710839 19710931 -230976923 + MIR SINE MIR 64 162 -100 2955 126 310 11 chr2 19712345 19712981 -230974873 - LTR12 LTR ERV1 0 826 1 702 173 48 129 chr2 19713163 19713434 -230974420 - pTR5 LTR ERV1 -1447 991 743 2219 114 0 3 chr2 19713526 19713832 -230974022 + AluY SINE Alu 1 305 -6 1849 150 40 7 chr2 19714400 19714700 -230973154 + AluJb SINE Alu 1 310 -2 2341 87 0 37 chr2 19714706 19715027 -230972827 + AluY SINE Alu 1 309 -2 1063 259 17 4 chr2 19715588 19715820 -230972034 + MIR SINE MIR 28 262 0 334 357 30 6 chr2 19715910 19716078 -230971776 - MIR SINE MIR -62 200 29 2274 82 3 54 chr2 19716202 19716519 -230971335 - AluSg SINE Alu -9 301 1 1509 233 159 30 chr2 19716679 19717206 -230970648 - MLT1G1 LTR MaLR 0 595 1 358 203 203 63 chr2 19718505 19718571 -230969283 - MIR SINE MIR 0 262 207 2202 110 0 0 chr2 19718571 19718879 -230968975 - AluSq SINE Alu 0 308 1 358 203 203 63 chr2 19718879 19718954 -230968900 - MIR SINE MIR -55 207 100 601 157 28 0 chr2 19719470 19719578 -230968276 + MIR SINE MIR 41 151 -111 213 241 69 17 chr2 19720247 19720305 -230967549 - MIR SINE MIR -70 192 132 215 191 24 0 chr2 19722855 19722897 -230964957 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 707 225 16 0 chr2 19722899 19723153 -230964701 + (CATA)n Simple_repeat Simple_repeat 1 258 0 261 140 0 35 chr2 19723153 19723210 -230964644 - MER4-int LTR ERV1 -5433 1165 1111 267 244 0 0 chr2 19723210 19723288 -230964566 + (CA)n Simple_repeat Simple_repeat 2 79 0 1627 170 89 23 chr2 19723389 19723736 -230964118 + MLT1B LTR MaLR 1 370 -20 245 172 0 65 chr2 19724188 19724281 -230963573 + GA-rich Low_complexity Low_complexity 2 88 0 460 160 0 93 chr2 19724297 19724491 -230963363 + GA-rich Low_complexity Low_complexity 3 178 0 245 284 66 112 chr2 19725657 19725827 -230962027 + L2 LINE L2 1553 1729 -1585 2277 95 3 3 chr2 19725827 19726112 -230961742 + AluSx SINE Alu 1 285 -27 300 111 0 0 chr2 19726112 19726157 -230961697 + (CA)n Simple_repeat Simple_repeat 2 46 0 245 284 66 112 chr2 19726157 19726333 -230961521 + L2 LINE L2 1727 1884 -1430 1566 165 39 11 chr2 19726338 19726585 -230961269 + AluJo SINE Alu 30 286 -26 672 77 0 0 chr2 19726585 19726676 -230961178 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 1566 165 39 11 chr2 19726676 19726688 -230961166 + AluJo SINE Alu 286 296 -16 356 95 16 16 chr2 19726692 19726735 -230961119 + AluS SINE Alu 2 44 -259 310 91 0 0 chr2 19726735 19726779 -230961075 + Alu SINE Alu 1 44 -257 2357 114 0 0 chr2 19726779 19727087 -230960767 + AluSg SINE Alu 1 308 -2 349 187 11 22 chr2 19727087 19727178 -230960676 + GA-rich Low_complexity Low_complexity 1 90 0 1348 322 122 12 chr2 19727180 19727932 -230959922 + L2 LINE L2 1878 2743 -571 2331 106 0 0 chr2 19727932 19728225 -230959629 - AluSx SINE Alu -19 293 1 1348 322 122 12 chr2 19728225 19728359 -230959495 + L2 LINE L2 2743 2861 -453 485 356 13 43 chr2 19728434 19728737 -230959117 + L2 LINE L2 2977 3270 -2 260 297 39 50 chr2 19728846 19729028 -230958826 - L2 LINE L2 -165 3107 2928 1326 173 107 15 chr2 19729756 19730027 -230957827 - AluJo SINE Alu -6 296 1 1871 162 29 19 chr2 19730081 19730390 -230957464 - AluJo SINE Alu 0 312 1 703 296 62 65 chr2 19730428 19730861 -230956993 - MLT1K LTR MaLR -60 528 97 638 270 86 95 chr2 19731627 19731800 -230956054 + MLT1H LTR MaLR 3 176 -370 1929 182 0 3 chr2 19731800 19732107 -230955747 + AluJo SINE Alu 1 306 -6 638 270 86 95 chr2 19732107 19732449 -230955405 + MLT1H LTR MaLR 176 542 -4 181 246 246 0 chr2 19733161 19733218 -230954636 - L2 LINE L2 -1 3271 3201 181 264 28 28 chr2 19733383 19733455 -230954399 - MIR SINE MIR -9 253 182 21 36 0 0 chr2 19733478 19733506 -230954348 + AT_rich Low_complexity Low_complexity 1 28 0 1847 158 3 54 chr2 19733811 19734127 -230953727 + AluSx SINE Alu 1 300 -12 555 272 17 56 chr2 19734165 19734397 -230953457 - L1MC/D LINE L1 -1994 5814 5592 736 152 15 8 chr2 19734421 19734553 -230953301 - AluJb SINE Alu -178 134 2 206 207 45 18 chr2 19734740 19734851 -230953003 + (TA)n Simple_repeat Simple_repeat 1 114 0 561 274 36 32 chr2 19734929 19735148 -230952706 + MLT1K LTR MaLR 363 582 -6 196 310 14 0 chr2 19735152 19735223 -230952631 - MIR SINE MIR -175 87 16 297 0 0 0 chr2 19735748 19735781 -230952073 + (TG)n Simple_repeat Simple_repeat 2 34 0 207 307 188 33 chr2 19736027 19736330 -230951524 + L2 LINE L2 2567 2916 -398 1898 199 68 33 chr2 19736336 19736823 -230951031 - MLT1D LTR MaLR -1 504 1 218 270 79 32 chr2 19736866 19736929 -230950925 + MER91A DNA MER1_type 123 188 -8 243 282 55 80 chr2 19736934 19737097 -230950757 + L2 LINE L2 2954 3112 -160 998 271 66 3 chr2 19737482 19737847 -230950007 + HAL1 LINE L1 4 391 -2116 405 295 78 6 chr2 19737961 19738127 -230949727 + HAL1 LINE L1 605 782 -1725 1269 232 54 37 chr2 19738138 19738209 -230949645 + HAL1 LINE L1 1033 1101 -1406 2850 105 19 0 chr2 19738209 19738629 -230949225 - MSTA LTR MaLR 0 428 1 1269 232 54 37 chr2 19738629 19739229 -230948625 + HAL1 LINE L1 1101 1818 -689 1141 144 6 0 chr2 19739682 19739849 -230948005 + AluSg/x SINE Alu 129 296 -16 476 293 25 6 chr2 19739982 19740139 -230947715 + L1ME3A LINE L1 6010 6169 -1 256 250 29 0 chr2 19740937 19741005 -230946849 - LTR67 LTR ERVL -431 126 57 1844 112 108 7 chr2 19741511 19741789 -230946065 - AluSx SINE Alu -6 306 1 371 266 65 53 chr2 19742910 19743079 -230944775 - MIR3 SINE MIR -21 187 17 261 307 11 11 chr2 19743573 19743661 -230944193 + MIR SINE MIR 28 115 -147 999 291 35 38 chr2 19743961 19744384 -230943470 + L1ME1 LINE L1 5740 6161 -5 378 234 9 37 chr2 19745143 19745250 -230942604 - MLT1K LTR MaLR -31 557 454 276 293 10 10 chr2 19745258 19745357 -230942497 + CT-rich Low_complexity Low_complexity 2 100 0 225 317 58 8 chr2 19746793 19746913 -230940941 - MIR SINE MIR -61 147 22 302 239 68 0 chr2 19747791 19747879 -230939975 - MIR3 SINE MIR -8 200 107 561 170 113 50 chr2 19748388 19748529 -230939325 + MER5A DNA MER1_type 40 189 0 398 298 33 8 chr2 19749006 19749127 -230938727 + MER91A DNA MER1_type 3 126 -70 268 299 43 8 chr2 19749962 19750079 -230937775 - L1ME4a LINE L1 -38 6083 5963 798 197 11 38 chr2 19752675 19752858 -230934996 + MER5B DNA MER1_type 1 178 0 225 364 63 38 chr2 19752987 19753226 -230934628 + L2 LINE L2 2974 3218 -54 201 74 0 0 chr2 19753369 19753396 -230934458 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 2099 157 12 30 chr2 19753540 19753804 -230934050 + L1MB7 LINE L1 5751 6005 -179 2242 101 0 36 chr2 19753804 19754111 -230933743 - AluSx SINE Alu -16 296 1 2099 157 12 30 chr2 19754111 19754272 -230933582 + L1MB7 LINE L1 6005 6168 -16 314 242 15 91 chr2 19754314 19754446 -230933408 - MER5A DNA MER1_type -5 184 63 519 275 22 55 chr2 19755372 19755590 -230932264 - MIR SINE MIR -6 256 42 254 329 71 0 chr2 19755865 19756020 -230931834 + L2 LINE L2 2797 2962 -352 411 237 132 0 chr2 19756058 19756172 -230931682 + L2 LINE L2 3185 3313 0 326 292 189 11 chr2 19756186 19756446 -230931408 + L2 LINE L2 3008 3313 0 21 0 0 0 chr2 19757600 19757621 -230930233 + AT_rich Low_complexity Low_complexity 1 21 0 4319 163 21 51 chr2 19757736 19758139 -230929715 - L1MB4 LINE L1 -11 6169 5755 234 0 0 0 chr2 19758139 19758165 -230929689 + (TA)n Simple_repeat Simple_repeat 1 26 0 4319 163 21 51 chr2 19758165 19758642 -230929212 - L1MB4 LINE L1 -425 5755 5318 2151 131 10 0 chr2 19758642 19758947 -230928907 - AluSx SINE Alu -3 309 2 4319 163 21 51 chr2 19758947 19759089 -230928765 - L1MB4 LINE L1 -862 5318 5173 937 274 151 9 chr2 19759342 19759780 -230928074 - L2 LINE L2 -1 3312 2813 2067 145 95 25 chr2 19759786 19760186 -230927668 + MSTA LTR MaLR 1 428 0 1659 183 4 25 chr2 19760230 19760509 -230927345 + AluJo SINE Alu 1 273 -39 616 138 0 0 chr2 19760509 19760603 -230927251 + AluJb SINE Alu 203 296 -16 825 298 147 25 chr2 19760675 19761246 -230926608 - L2 LINE L2 -675 2639 1999 251 54 27 0 chr2 19761340 19761377 -230926477 + (TC)n Simple_repeat Simple_repeat 1 38 0 2145 141 3 0 chr2 19761377 19761674 -230926180 - AluSx SINE Alu -14 298 1 471 231 75 12 chr2 19762227 19762387 -230925467 - L2 LINE L2 -1313 2001 1832 813 191 96 50 chr2 19762401 19762621 -230925233 - MIR SINE MIR 0 262 33 196 273 0 0 chr2 19762618 19762662 -230925192 - L2 LINE L2 -1510 1804 1761 * 1383 230 31 49 chr2 19762662 19763053 -230924801 - MLT1J1 LTR MaLR 0 446 63 834 309 90 17 chr2 19763140 19763674 -230924180 - L2 LINE L2 -1554 1760 1188 960 300 76 15 chr2 19763734 19764346 -230923508 - L1ME3 LINE L1 -336 5826 5152 1845 172 21 0 chr2 19764346 19764631 -230923223 - AluJo SINE Alu -15 297 7 960 300 76 15 chr2 19764631 19764812 -230923042 - L1ME3 LINE L1 -1010 5152 4983 * 4701 176 42 32 chr2 19764779 19766310 -230921544 - L1MD1 LINE L1 0 6242 4688 266 330 72 21 chr2 19766340 19766673 -230921181 - L1MB4 LINE L1 -1063 5083 4734 1038 171 0 0 chr2 19766806 19766964 -230920890 - AluJb SINE Alu -18 294 137 1027 242 45 14 chr2 19766967 19767256 -230920598 + MER93a LTR ERV1 101 398 -4 2015 134 10 3 chr2 19767262 19767552 -230920302 - AluSx SINE Alu -20 292 1 415 303 81 10 chr2 19767555 19767951 -230919903 - L1MB4 LINE L1 -1397 4749 4326 451 210 36 90 chr2 19769050 19769217 -230918637 - MER113 DNA MER1_type? -4 517 360 2232 108 3 0 chr2 19769348 19769635 -230918219 + AluSx SINE Alu 1 288 -24 323 211 39 29 chr2 19769672 19769776 -230918078 - MER113 DNA MER1_type? -408 113 9 237 264 11 11 chr2 19769784 19769871 -230917983 + MIR SINE MIR 167 253 -9 775 173 27 22 chr2 19769905 19770090 -230917764 + MER53 DNA DNA 4 189 0 344 107 77 18 chr2 19770719 19770888 -230916966 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 469 67 62 56 chr2 19770847 19771026 -230916828 + (CACAC)n Simple_repeat Simple_repeat 1 180 0 204 109 65 0 chr2 19771029 19771075 -230916779 + (CA)n Simple_repeat Simple_repeat 2 50 0 407 226 46 111 chr2 19771222 19771439 -230916415 + L1MC5 LINE L1 7717 7919 -42 636 179 26 100 chr2 19771494 19771684 -230916170 + MER20 DNA MER1_type 1 176 -43 355 99 50 55 chr2 19771833 19772014 -230915840 + (CA)n Simple_repeat Simple_repeat 1 180 0 324 109 17 74 chr2 19772023 19772198 -230915656 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 366 96 61 17 chr2 19772229 19772344 -230915510 + (CA)n Simple_repeat Simple_repeat 2 121 0 508 142 59 6 chr2 19772362 19772531 -230915323 + (CA)n Simple_repeat Simple_repeat 1 178 0 360 0 0 0 chr2 19773212 19773252 -230914602 + (TG)n Simple_repeat Simple_repeat 2 41 0 987 170 13 0 chr2 19773296 19773449 -230914405 - FRAM SINE Alu -21 155 1 227 318 83 38 chr2 19775470 19775602 -230912252 - L2 LINE L2 -9 3263 3126 1125 263 104 51 chr2 19776086 19776647 -230911207 - MLT1G LTR MaLR -8 582 2 393 248 23 31 chr2 19777510 19777639 -230910215 + MER63 DNA MER1_type 933 1060 0 208 290 101 14 chr2 19777706 19777775 -230910079 - MIR SINE MIR -177 85 11 188 310 56 0 chr2 19777953 19778024 -230909830 - MIR SINE MIR -92 116 42 1020 220 0 0 chr2 19778247 19778456 -230909398 - MER3 DNA MER1_type 0 209 1 285 233 129 43 chr2 19779676 19779792 -230908062 + L2 LINE L2 3187 3312 -1 315 184 92 11 chr2 19781089 19781176 -230906678 - MER94 DNA DNA -14 120 27 396 133 27 27 chr2 19781181 19781256 -230906598 + L1MC5 LINE L1 7625 7699 -262 2150 118 7 7 chr2 19781269 19781573 -230906281 + AluSx SINE Alu 1 304 -8 1666 165 4 0 chr2 19781580 19781828 -230906026 + 7SLRNA srpRNA srpRNA 1 249 -71 879 132 6 12 chr2 19831898 19832065 -230855789 + (TTCC)n Simple_repeat Simple_repeat 4 169 0 3418 186 28 9 chr2 19832065 19832747 -230855107 - L1MC2 LINE L1 -8 6336 5642 596 183 67 0 chr2 19832747 19832867 -230854987 - L1MB2 LINE L1 -263 5908 5781 2602 199 97 6 chr2 19832896 19833790 -230854064 - L1MB2 LINE L1 -499 5672 4692 486 272 121 80 chr2 19833791 19833892 -230853962 - L1MB2 LINE L1 -2654 3492 3397 1691 167 0 29 chr2 19833892 19834203 -230853651 + AluJb SINE Alu 1 302 -10 486 272 121 80 chr2 19834203 19834560 -230853294 - L1MB2 LINE L1 -2749 3397 3001 718 171 8 0 chr2 19834651 19834768 -230853086 + FLAM_C SINE Alu 6 123 -20 226 267 23 12 chr2 19834871 19834957 -230852897 - L1MB2 LINE L1 -3328 2818 2732 2312 84 0 0 chr2 19836734 19837042 -230850812 + AluSg SINE Alu 1 308 -2 537 137 53 69 chr2 19837329 19837460 -230850394 + MER53 DNA DNA 1 129 -60 21 82 0 0 chr2 19837871 19837920 -230849934 + GC_rich Low_complexity Low_complexity 1 49 0 679 102 86 47 chr2 19838090 19838218 -230849636 - FLAM_C SINE Alu 0 133 1 206 191 0 176 chr2 19838942 19838975 -230848879 + L2 LINE L2 3240 3257 -56 2152 84 0 42 chr2 19838975 19839285 -230848569 + AluSx SINE Alu 1 297 -15 206 191 0 176 chr2 19839285 19839319 -230848535 + L2 LINE L2 3257 3295 -18 1805 180 0 7 chr2 19839535 19839840 -230848014 + AluJb SINE Alu 1 293 -19 2229 91 0 14 chr2 19840481 19840652 -230847202 - AluSx SINE Alu 0 304 137 2078 123 10 10 chr2 19840652 19840953 -230846901 - AluSp SINE Alu -12 301 1 2229 91 0 14 chr2 19840953 19841089 -230846765 - AluSx SINE Alu -167 137 1 348 296 171 22 chr2 19841570 19841773 -230846081 - MIR SINE MIR -32 230 12 360 150 17 0 chr2 19841814 19841874 -230845980 - U7 snRNA snRNA -2 61 1 481 211 49 28 chr2 19842147 19842289 -230845565 + L1ME3A LINE L1 5989 6133 -37 1745 164 27 0 chr2 19842387 19842686 -230845168 + AluJb SINE Alu 1 307 -5 2156 121 0 3 chr2 19843358 19843663 -230844191 + AluSg SINE Alu 1 304 -6 721 214 0 0 chr2 19843673 19843804 -230844050 + FLAM_C SINE Alu 1 131 -2 21 36 0 0 chr2 19845767 19845795 -230842059 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 19846550 19846575 -230841279 + AT_rich Low_complexity Low_complexity 1 25 0 343 256 173 15 chr2 19847467 19847600 -230840254 + L1ME LINE L1 5621 5774 -347 983 204 57 9 chr2 19847683 19847913 -230839941 + AluJb SINE Alu 62 302 -10 1219 135 163 28 chr2 19848320 19848602 -230839252 - MER2 DNA MER2_type -25 320 1 1571 184 15 0 chr2 19848700 19848967 -230838887 - AluJb SINE Alu -20 292 22 720 212 0 0 chr2 19848999 19849131 -230838723 - FLAM_C SINE Alu -1 132 1 1742 162 26 19 chr2 19849636 19849945 -230837909 - AluJb SINE Alu -1 311 1 26 0 0 0 chr2 19851725 19851751 -230836103 + AT_rich Low_complexity Low_complexity 1 26 0 2140 110 16 10 chr2 19852250 19852560 -230835294 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 19853262 19853283 -230834571 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 19853672 19853711 -230834143 + AT_rich Low_complexity Low_complexity 1 39 0 2876 16 0 0 chr2 19854137 19854453 -230833401 - AluYb8 SINE Alu -2 316 1 3945 186 32 33 chr2 19854778 19855743 -230832111 - L1MB4 LINE L1 -36 6144 5176 5130 147 101 64 chr2 19856407 19856595 -230831259 + Tigger3b DNA MER2_type 1 181 -2847 2367 96 0 10 chr2 19856595 19856909 -230830945 + AluSx SINE Alu 1 311 -1 5130 147 101 64 chr2 19856909 19857435 -230830419 + Tigger3b DNA MER2_type 181 686 -2342 930 188 0 0 chr2 19857435 19857584 -230830270 + FRAM SINE Alu 1 149 -17 5130 147 101 64 chr2 19857584 19858055 -230829799 + Tigger3b DNA MER2_type 686 1231 0 29 28 0 0 chr2 19859500 19859536 -230828318 + AT_rich Low_complexity Low_complexity 1 36 0 2465 87 0 0 chr2 19859543 19859853 -230828001 + AluSg SINE Alu 1 310 0 270 0 0 0 chr2 19859854 19859884 -230827970 + (TA)n Simple_repeat Simple_repeat 2 31 0 1557 95 9 18 chr2 19860530 19860751 -230827103 + AluSg/x SINE Alu 79 297 -15 1800 147 0 46 chr2 19861646 19861932 -230825922 + AluJb SINE Alu 1 272 -40 182 36 0 36 chr2 19861932 19861960 -230825894 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1800 147 0 46 chr2 19861960 19862000 -230825854 + AluJb SINE Alu 272 312 0 954 244 102 83 chr2 19862179 19862513 -230825341 + L1MC4 LINE L1 7520 7869 -173 2192 96 7 14 chr2 19862513 19862806 -230825048 - AluSx SINE Alu -15 297 7 954 244 102 83 chr2 19862806 19862979 -230824875 + L1MC4 LINE L1 7869 8037 -5 324 310 0 26 chr2 19863341 19863457 -230824397 + MER8 DNA MER2_type 27 139 -100 22 35 0 0 chr2 19863731 19863760 -230824094 + AT_rich Low_complexity Low_complexity 1 29 0 2001 138 0 20 chr2 19863824 19864129 -230823725 + AluSx SINE Alu 9 307 -5 341 279 106 0 chr2 19864420 19864524 -230823330 - MIR SINE MIR -78 184 70 34 0 0 0 chr2 19864666 19864700 -230823154 + AT_rich Low_complexity Low_complexity 1 34 0 2208 73 0 4 chr2 19864700 19864972 -230822882 - AluY SINE Alu -25 286 16 1899 158 0 7 chr2 19866799 19867091 -230820763 - AluSx SINE Alu -13 299 10 2074 109 7 0 chr2 19867365 19867641 -230820213 + AluSx SINE Alu 3 280 -32 375 78 0 0 chr2 19867642 19867693 -230820161 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 237 316 51 25 chr2 19867731 19867810 -230820044 + MIR SINE MIR 35 115 -147 1272 275 68 13 chr2 19867839 19868380 -230819474 - L1M4 LINE L1 -1166 4980 4410 232 271 132 23 chr2 19868676 19868805 -230819049 - MER20B DNA MER1_type -604 179 37 230 323 132 7 chr2 19869502 19869630 -230818224 + MIR SINE MIR 1 139 -69 1310 204 85 66 chr2 19870819 19871406 -230816448 + L1MC5 LINE L1 6975 7572 -389 23 0 0 0 chr2 19871451 19871474 -230816380 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 19873287 19873327 -230814527 + AT_rich Low_complexity Low_complexity 1 40 0 241 184 0 20 chr2 19873991 19874040 -230813814 + (CATA)n Simple_repeat Simple_repeat 3 50 0 847 203 35 25 chr2 19879575 19879777 -230808077 - MER105 DNA DNA 0 204 1 1378 182 8 8 chr2 19879868 19880104 -230807750 - AluJo SINE Alu -38 274 39 202 284 245 49 chr2 19880658 19880964 -230806890 + L2 LINE L2 2484 2849 -465 817 312 108 29 chr2 19881119 19881906 -230805948 - L2 LINE L2 0 3313 2412 590 241 64 35 chr2 19881993 19882366 -230805488 - L1M4 LINE L1 -2853 3293 2910 286 143 0 0 chr2 19882372 19882414 -230805440 + 5S rRNA rRNA 1 42 -79 561 171 48 0 chr2 19883112 19883217 -230804637 + FLAM_C SINE Alu 21 130 -13 294 317 108 52 chr2 19883253 19883502 -230804352 - L2 LINE L2 -815 2499 2237 1080 110 6 43 chr2 19884497 19884660 -230803194 + AluSg SINE Alu 1 157 -153 25 0 0 0 chr2 19886557 19886582 -230801272 + AT_rich Low_complexity Low_complexity 1 25 0 221 176 0 20 chr2 19887065 19887116 -230800738 + CT-rich Low_complexity Low_complexity 2 51 0 1665 122 12 8 chr2 19887858 19888105 -230799749 - AluSx SINE Alu -21 291 44 2114 93 18 4 chr2 19888135 19888445 -230799409 + AluSp SINE Alu 1 314 0 1960 148 20 3 chr2 19888915 19889218 -230798636 + AluSx SINE Alu 3 310 -2 632 161 31 19 chr2 19891241 19891402 -230796452 + Charlie5 DNA MER1_type 2423 2585 -27 2599 37 0 0 chr2 19891700 19891996 -230795858 + AluY SINE Alu 1 296 -15 364 203 40 3 chr2 19892402 19892526 -230795328 - AluJ/monomer SINE Alu -246 54 1 191 245 306 20 chr2 19893298 19893396 -230794458 + MIR SINE MIR 74 199 -63 241 378 99 13 chr2 19893569 19893720 -230794134 - L2 LINE L2 -55 3217 3054 243 139 0 0 chr2 19894066 19894073 -230793781 + (TAA)n Simple_repeat Simple_repeat 2 8 -36 1636 102 125 16 chr2 19894073 19894329 -230793525 + AluSg SINE Alu 1 284 -26 243 139 0 0 chr2 19894329 19894364 -230793490 + (TAA)n Simple_repeat Simple_repeat 7 44 0 2470 143 57 30 chr2 19894426 19894867 -230792987 + MER21A LTR ERV1 459 911 -20 1969 144 0 11 chr2 19894869 19895154 -230792700 + AluSx SINE Alu 1 282 -30 433 104 15 0 chr2 19895301 19895368 -230792486 - MER4E LTR ERV1 -5 761 694 * 1597 136 95 74 chr2 19895360 19895639 -230792215 - MER4B LTR ERV1 -235 375 85 2426 68 3 0 chr2 19895639 19895935 -230791919 - AluSp SINE Alu -16 297 1 1597 136 95 74 chr2 19895935 19896022 -230791832 - MER4B LTR ERV1 -525 85 1 3136 135 40 54 chr2 19896149 19896757 -230791097 + MER4A LTR ERV1 2 600 0 1765 155 35 7 chr2 19897081 19897365 -230790489 - AluJb SINE Alu -20 292 1 304 279 136 75 chr2 19897366 19897566 -230790288 - L1MC/D LINE L1 -297 5824 5638 561 215 15 39 chr2 19897566 19897696 -230790158 - FLAM_A SINE Alu -6 127 1 304 279 136 75 chr2 19897696 19897854 -230790000 - L1MC/D LINE L1 -483 5638 5449 25 31 0 0 chr2 19897854 19897886 -230789968 + AT_rich Low_complexity Low_complexity 1 32 0 237 276 31 10 chr2 19898393 19898491 -230789363 + MER72 LTR ERV1 377 476 -246 633 193 49 50 chr2 19898499 19898731 -230789123 + LTR45B LTR ERV1 302 525 0 409 147 53 13 chr2 19898798 19898873 -230788981 + AluJb SINE Alu 190 267 -45 370 276 55 8 chr2 19898948 19899075 -230788779 - L1MC/D LINE L1 -1526 4620 4488 864 245 117 11 chr2 19899879 19900144 -230787710 + MER58B DNA MER1_type 46 338 -3 655 233 89 30 chr2 19900160 19900430 -230787424 + MER33 DNA MER1_type 29 314 -10 1699 147 84 7 chr2 19900689 19900975 -230786879 + AluJb SINE Alu 1 308 -4 299 276 32 8 chr2 19901067 19901190 -230786664 + L1M4 LINE L1 3719 3844 -2302 399 300 120 42 chr2 19901250 19901425 -230786429 + L1M4 LINE L1 4360 4520 -1626 1682 140 57 4 chr2 19901425 19901729 -230786125 + AluJb SINE Alu 1 312 0 399 300 120 42 chr2 19901729 19901960 -230785894 + L1M4 LINE L1 4520 4798 -1348 1956 128 10 0 chr2 19902091 19902387 -230785467 - AluSx SINE Alu -7 305 7 2059 116 7 7 chr2 19902418 19902721 -230785133 + AluSx SINE Alu 1 303 -9 381 222 19 28 chr2 19902914 19903022 -230784832 + L1MD1 LINE L1 6079 6185 -57 219 315 137 0 chr2 19904668 19904741 -230783113 + MIR3 SINE MIR 85 167 -41 5452 70 14 3 chr2 19908054 19908787 -230779067 + L1P LINE L1 4490 5230 -916 1667 184 13 23 chr2 19909037 19909347 -230778507 + AluJb SINE Alu 1 307 -5 1650 173 11 11 chr2 19909347 19909625 -230778229 + AluJb SINE Alu 1 278 -34 215 30 0 30 chr2 19909640 19909673 -230778181 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 25 75 0 0 chr2 19909836 19909889 -230777965 + AT_rich Low_complexity Low_complexity 1 53 0 590 177 16 32 chr2 19910544 19910668 -230777186 - FLAM_C SINE Alu -2 141 20 255 364 66 13 chr2 19910668 19910819 -230777035 - L2 LINE L2 -239 3033 2875 855 184 0 0 chr2 19911165 19911306 -230776548 + AluJb SINE Alu 1 141 -171 228 130 0 0 chr2 19911323 19911369 -230776485 + (A)n Simple_repeat Simple_repeat 1 46 0 22 56 0 0 chr2 19911983 19912019 -230775835 + AT_rich Low_complexity Low_complexity 1 36 0 1273 165 89 58 chr2 19912112 19912237 -230775617 + AluJo SINE Alu 1 121 -191 1980 138 7 0 chr2 19912237 19912534 -230775320 + AluSx SINE Alu 1 299 -13 1273 165 89 58 chr2 19912534 19912699 -230775155 + AluJo SINE Alu 121 300 -12 3980 122 51 7 chr2 19913031 19913703 -230774151 - L1PA15 LINE L1 0 6165 5465 727 171 47 0 chr2 19913806 19913935 -230773919 + AluJo SINE Alu 1 135 -177 2002 100 62 0 chr2 19915472 19915761 -230772093 + AluSg1 SINE Alu 1 307 -2 34 84 0 0 chr2 19916021 19916104 -230771750 + AT_rich Low_complexity Low_complexity 1 83 0 1195 95 6 0 chr2 19916641 19916799 -230771055 + AluSc SINE Alu 148 306 -3 498 254 51 0 chr2 19917623 19917741 -230770113 + MER94 DNA DNA 11 134 0 1068 154 24 107 chr2 19917797 19918050 -230769804 + AluJo SINE Alu 5 236 -76 1455 193 0 0 chr2 19918052 19918317 -230769537 + AluJo SINE Alu 46 310 -2 394 176 49 40 chr2 19918535 19918653 -230769201 + MIR SINE MIR 41 158 -50 2318 106 0 0 chr2 19918653 19918955 -230768899 + AluY SINE Alu 1 302 -9 193 372 0 43 chr2 19919218 19919312 -230768542 - MIR3 SINE MIR -110 98 9 270 0 0 0 chr2 19919395 19919425 -230768429 + (A)n Simple_repeat Simple_repeat 1 30 0 183 279 82 0 chr2 19919697 19919758 -230768096 - MIR SINE MIR -108 100 35 24 0 0 0 chr2 19920985 19921009 -230766845 + AT_rich Low_complexity Low_complexity 1 24 0 2441 70 0 0 chr2 19921108 19921407 -230766447 - AluY SINE Alu -12 299 1 1645 263 86 54 chr2 19923088 19923539 -230764315 + L1ME LINE L1 92 527 -5543 1918 148 24 7 chr2 19923539 19923837 -230764017 + AluSx SINE Alu 1 303 -9 1645 263 86 54 chr2 19923837 19924294 -230763560 + L1ME LINE L1 527 1029 -5041 236 215 0 46 chr2 19924308 19924373 -230763481 - MER65C LTR ERV1 -7 454 393 1934 154 3 10 chr2 19924380 19924679 -230763175 + AluJb SINE Alu 5 301 -11 1149 169 0 31 chr2 19924727 19924952 -230762902 + AluJb SINE Alu 95 312 0 1287 214 110 27 chr2 19924955 19925329 -230762525 - MER65C LTR ERV1 -56 405 1 670 275 74 30 chr2 19925329 19925736 -230762118 + L1ME LINE L1 1079 1503 -4758 2889 205 117 33 chr2 19925742 19926493 -230761361 + MER21B LTR ERV1 1 814 -49 332 123 70 0 chr2 19926540 19926597 -230761257 + MER21B-int LTR ERV1 2 62 -4129 1514 188 97 18 chr2 19926751 19927091 -230760763 + MER21B-int LTR ERV1 146 512 -3679 261 139 0 0 chr2 19927103 19927146 -230760708 + (A)n Simple_repeat Simple_repeat 1 43 0 1448 210 41 7 chr2 19927347 19927642 -230760212 - MER58B DNA MER1_type -36 305 1 360 0 0 0 chr2 19927769 19927809 -230760045 + (TG)n Simple_repeat Simple_repeat 2 41 0 1396 174 106 4 chr2 19928740 19929030 -230758824 + AluJo SINE Alu 3 319 0 720 179 0 0 chr2 19929117 19929229 -230758625 + AluJ SINE Alu 1 112 -200 2234 148 61 5 chr2 19929230 19929607 -230758247 + MSTA LTR MaLR 2 399 -29 1144 155 0 52 chr2 19929613 19929806 -230758048 + AluJ SINE Alu 107 289 -23 24 0 0 0 chr2 19929806 19929830 -230758024 + AT_rich Low_complexity Low_complexity 1 24 0 1608 150 92 7 chr2 19930438 19930711 -230757143 - AluJo SINE Alu -16 296 1 1773 171 16 13 chr2 19931664 19931974 -230755880 - AluJb SINE Alu -1 311 1 1534 149 12 90 chr2 19932004 19932168 -230755686 - AluJb SINE Alu -16 296 121 279 0 0 0 chr2 19932168 19932199 -230755655 + (TG)n Simple_repeat Simple_repeat 2 32 0 1534 149 12 90 chr2 19932199 19932235 -230755619 - AluJb SINE Alu -191 121 84 486 0 0 0 chr2 19932235 19932289 -230755565 + (TG)n Simple_repeat Simple_repeat 1 54 0 1534 149 12 90 chr2 19932289 19932408 -230755446 - AluJb SINE Alu -228 84 1 181 296 0 0 chr2 19933069 19933113 -230754741 - L2 LINE L2 -224 3048 3005 230 343 149 17 chr2 19933330 19933505 -230754349 - MIR SINE MIR 0 262 65 2295 97 0 3 chr2 19933606 19933904 -230753950 + AluSx SINE Alu 6 302 -10 21 36 0 0 chr2 19934540 19934568 -230753286 + AT_rich Low_complexity Low_complexity 1 28 0 424 269 84 8 chr2 19934726 19934845 -230753009 + FLAM_A SINE Alu 6 133 0 1991 128 3 47 chr2 19935084 19935404 -230752450 + AluSx SINE Alu 1 306 -6 370 259 45 53 chr2 19935602 19936004 -230751850 - Charlie2 DNA MER1_type -2215 567 2 314 227 49 119 chr2 19936005 19936190 -230751664 + MER5B DNA MER1_type 6 177 -1 324 271 36 2 chr2 19936292 19936434 -230751420 + MIR SINE MIR 37 205 -57 674 181 0 9 chr2 19936524 19936640 -230751214 + AluJ SINE Alu 3 117 -195 238 350 30 0 chr2 19936693 19936793 -230751061 + L1MC/D LINE L1 5614 5716 -2092 2159 122 3 0 chr2 19937334 19937645 -230750209 + AluSx SINE Alu 1 312 0 651 184 142 0 chr2 19938465 19938606 -230749248 - AluJo SINE Alu -31 281 121 819 203 0 0 chr2 19938720 19938863 -230748991 + AluJ SINE Alu 123 265 -47 306 98 78 0 chr2 19938863 19938914 -230748940 + AluJ SINE Alu 241 295 -7 23 54 0 0 chr2 19938919 19938956 -230748898 + AT_rich Low_complexity Low_complexity 1 37 0 1241 202 0 91 chr2 19939110 19939407 -230748447 + AluJb SINE Alu 5 274 -38 1601 165 0 0 chr2 19939535 19939825 -230748029 - AluJb SINE Alu 0 319 30 2334 87 0 3 chr2 19940187 19940499 -230747355 + AluY SINE Alu 1 311 0 1671 143 6 78 chr2 19940569 19940891 -230746963 - AluJo SINE Alu -9 303 5 2155 90 7 0 chr2 19941078 19941366 -230746488 + AluSq SINE Alu 1 290 -23 748 178 0 8 chr2 19943532 19943653 -230744201 + FLAM_C SINE Alu 6 127 -185 216 0 0 0 chr2 19943653 19943677 -230744177 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1535 132 27 27 chr2 19944134 19944430 -230743424 + AluJb SINE Alu 1 296 -16 21 36 0 0 chr2 19945857 19945885 -230741969 + GC_rich Low_complexity Low_complexity 1 28 0 224 130 22 0 chr2 19946211 19946257 -230741597 + CT-rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr2 19946429 19946462 -230741392 + GC_rich Low_complexity Low_complexity 1 33 0 333 244 24 12 chr2 19947279 19947361 -230740493 + L2 LINE L2 3134 3216 -56 268 326 152 37 chr2 19947421 19947881 -230739973 + L2 LINE L2 2247 2759 -555 254 138 123 15 chr2 19948321 19948386 -230739468 + MLT1K LTR MaLR 513 584 -4 216 309 62 0 chr2 19948408 19948489 -230739365 - MIR SINE MIR -13 249 164 808 228 0 41 chr2 19948490 19948661 -230739193 + MER45A DNA AcHobo 1 164 -14 423 244 9 0 chr2 19948687 19948802 -230739052 + MER103 DNA DNA 49 164 -2 552 219 175 7 chr2 19949104 19949241 -230738613 + MER5A DNA MER1_type 29 188 -1 363 274 35 35 chr2 19949243 19949356 -230738498 + MLT1L LTR MaLR 151 263 -352 759 209 0 78 chr2 19949618 19949762 -230738092 - MER5B DNA MER1_type 0 178 51 2349 80 0 0 chr2 19949762 19950089 -230737765 + AluSq SINE Alu 1 313 0 759 209 0 78 chr2 19950089 19950135 -230737719 - MER5B DNA MER1_type -127 51 3 799 153 0 8 chr2 19950287 19950418 -230737436 + AluJo SINE Alu 5 134 -178 396 236 130 75 chr2 19950459 19950752 -230737102 - HAL1b LINE L1 -71 1277 969 405 0 0 0 chr2 19950752 19950797 -230737057 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 454 228 57 49 chr2 19950809 19950932 -230736922 - FRAM SINE Alu -49 127 4 396 213 132 114 chr2 19950934 19951055 -230736799 - HAL1b LINE L1 -365 983 866 2240 92 0 0 chr2 19951055 19951347 -230736507 + AluSg SINE Alu 2 293 -17 396 213 132 114 chr2 19951347 19951558 -230736296 - HAL1b LINE L1 -482 866 645 417 263 135 19 chr2 19951578 19951734 -230736120 - MLT1H LTR MaLR 0 549 376 790 215 134 11 chr2 19951782 19951968 -230735886 - MLT1H LTR MaLR -268 281 73 1642 173 10 13 chr2 19952034 19952347 -230735507 + AluJb SINE Alu 1 312 0 1368 150 120 15 chr2 19952438 19952704 -230735150 + AluJo SINE Alu 1 294 -18 362 192 77 13 chr2 19952716 19952794 -230735060 + LTR50 LTR ERVL 85 167 -628 962 90 0 0 chr2 19952840 19952973 -230734881 + AluSp SINE Alu 1 133 -180 315 111 25 12 chr2 19952978 19953059 -230734795 + (TA)n Simple_repeat Simple_repeat 2 83 0 1212 109 29 0 chr2 19953059 19953233 -230734621 + AluSp SINE Alu 123 301 -12 1256 237 139 31 chr2 19953314 19953766 -230734088 + LTR50 LTR ERVL 295 795 0 578 150 63 8 chr2 19953951 19954078 -230733776 - L1MB8 LINE L1 -1 6177 6044 265 235 0 0 chr2 19954106 19954157 -230733697 - MER66A LTR ERV1 -138 340 290 2249 75 3 38 chr2 19954182 19954501 -230733353 - AluY SINE Alu -3 308 1 1409 197 68 4 chr2 19954502 19954781 -230733073 - AluJb SINE Alu -5 297 1 923 204 5 16 chr2 19954783 19954974 -230732880 - L1MB8 LINE L1 -126 6052 5864 834 144 0 27 chr2 19954974 19955120 -230732734 - FLAM_C SINE Alu 0 143 2 1190 154 18 14 chr2 19955123 19955344 -230732510 - L1MB8 LINE L1 -306 5878 5657 1883 127 0 7 chr2 19955717 19956000 -230731854 + AluJb SINE Alu 1 281 -31 2031 136 10 0 chr2 19956387 19956689 -230731165 + AluSq SINE Alu 1 305 -8 1836 136 121 82 chr2 19957018 19957051 -230730803 - MSTA LTR MaLR -8 420 390 2037 128 3 6 chr2 19957051 19957363 -230730491 + AluSx SINE Alu 1 311 -1 1836 136 121 82 chr2 19957363 19957733 -230730121 - MSTA LTR MaLR -38 390 1 2264 112 0 0 chr2 19957917 19958229 -230729625 + AluSx SINE Alu 1 312 0 813 157 0 22 chr2 19958437 19958571 -230729283 + FLAM_A SINE Alu 1 131 -2 720 133 92 0 chr2 19958730 19958850 -230729004 + FLAM_C SINE Alu 3 133 0 2138 99 14 0 chr2 19959408 19959700 -230728154 + AluSx SINE Alu 1 296 -16 2022 135 0 7 chr2 19959721 19960024 -230727830 + AluJb SINE Alu 1 301 -11 1515 217 0 0 chr2 19960404 19960685 -230727169 + AluJb SINE Alu 1 281 -31 273 29 0 0 chr2 19960690 19960724 -230727130 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1642 262 91 16 chr2 19961027 19961857 -230725997 + L2 LINE L2 2413 3300 -13 754 146 7 44 chr2 19961859 19961996 -230725858 + FLAM_C SINE Alu 1 132 -1 228 384 0 0 chr2 19962488 19962561 -230725293 - L2 LINE L2 -1 3271 3199 2256 143 14 8 chr2 19962603 19962974 -230724880 - THE1C LTR MaLR 0 375 3 5717 118 1 5 chr2 19962976 19963761 -230724093 - THE1C-int LTR MaLR 0 1580 799 23 68 0 0 chr2 19963786 19963830 -230724024 + AT_rich Low_complexity Low_complexity 1 44 0 1320 229 93 45 chr2 19963837 19964118 -230723736 + LTR29 LTR ERV1 162 473 -149 1561 169 7 49 chr2 19964118 19964426 -230723428 + AluJb SINE Alu 1 295 -17 1320 229 93 45 chr2 19964426 19964584 -230723270 + LTR29 LTR ERV1 473 622 0 1860 150 54 10 chr2 19964586 19964899 -230722955 + LTR29-int LTR ERV1 1 327 -6004 611 235 26 20 chr2 19964932 19965085 -230722769 - MER74A LTR ERVL -404 154 1 232 143 125 71 chr2 19965161 19965217 -230722637 + MLT1H LTR MaLR 265 323 -226 229 173 13 147 chr2 19965293 19965368 -230722486 + MLT1H LTR MaLR 485 549 0 2280 134 41 6 chr2 19965430 19965795 -230722059 - MER41D LTR ERV1 -179 378 1 354 122 0 0 chr2 19966002 19966051 -230721803 - MER63 DNA MER1_type -35 1025 977 522 161 0 0 chr2 19966052 19966133 -230721721 - MER63 DNA MER1_type -311 751 671 192 77 0 0 chr2 19966134 19966160 -230721694 + (T)n Simple_repeat Simple_repeat 1 26 0 2067 96 11 0 chr2 19966181 19966462 -230721392 + AluSx SINE Alu 16 299 -13 730 215 0 13 chr2 19966465 19966614 -230721240 + MER6B DNA MER2_type 1 147 -63 418 133 13 53 chr2 19966642 19966717 -230721137 + MER6 DNA MER2_type 794 865 0 248 341 32 51 chr2 19966837 19967054 -230720800 + MLT1K LTR MaLR 183 395 -193 206 324 0 0 chr2 19967068 19967139 -230720715 + GA-rich Low_complexity Low_complexity 2 72 0 * 211 256 0 0 chr2 19967103 19967142 -230720712 + polypurine Low_complexity Low_complexity 1 39 0 2380 162 19 32 chr2 19967201 19967633 -230720221 - MSTB LTR MaLR 0 426 1 312 148 16 33 chr2 19967653 19967714 -230720140 + MLT1K LTR MaLR 529 588 0 2195 105 0 0 chr2 19967977 19968271 -230719583 + AluSx SINE Alu 6 299 -13 1080 204 180 0 chr2 19968713 19968831 -230719023 + AluJb SINE Alu 1 96 -206 306 0 0 0 chr2 19968831 19968865 -230718989 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1080 204 180 0 chr2 19968865 19968996 -230718858 + AluJb SINE Alu 96 295 -7 1692 107 0 0 chr2 19969115 19969403 -230718451 - AluSg SINE Alu 0 336 49 786 168 0 15 chr2 19969488 19969625 -230718229 + AluJo SINE Alu 2 136 -176 23 0 0 0 chr2 19969771 19969794 -230718060 + AT_rich Low_complexity Low_complexity 1 23 0 1745 144 0 54 chr2 19969850 19970163 -230717691 + AluSx SINE Alu 9 304 -8 220 205 36 36 chr2 19970207 19970290 -230717564 + A-rich Low_complexity Low_complexity 2 84 0 3420 132 71 91 chr2 19971202 19971961 -230715893 - Ricksha DNA DNA 0 3246 2503 955 176 24 0 chr2 19971961 19972131 -230715723 + FAM SINE Alu 1 174 -11 3957 134 41 24 chr2 19972133 19972421 -230715433 - Ricksha DNA DNA -735 2511 2230 1209 172 119 32 chr2 19972421 19972706 -230715148 + AluYa5 SINE Alu 1 310 -1 3957 134 41 24 chr2 19972706 19972746 -230715108 - Ricksha DNA DNA -1016 2230 2192 2013 121 20 0 chr2 19972746 19973044 -230714810 - AluSx SINE Alu -8 304 1 3957 134 41 24 chr2 19973044 19973393 -230714461 - Ricksha DNA DNA -1054 2192 1821 1046 210 73 4 chr2 19973391 19973624 -230714230 - Ricksha DNA DNA -2957 289 41 * 1065 277 45 3 chr2 19973647 19973957 -230713897 - LTR16A LTR ERVL -17 433 111 307 361 57 10 chr2 19974092 19974286 -230713568 - L2 LINE L2 -926 2388 2186 297 148 37 0 chr2 19974599 19974680 -230713174 + CT-rich Low_complexity Low_complexity 2 85 0 6218 73 8 16 chr2 19975098 19975783 -230712071 - L1PA10 LINE L1 0 6168 5489 2049 116 3 3 chr2 19975783 19976084 -230711770 - AluSx SINE Alu -11 301 1 6218 73 8 16 chr2 19976084 19976238 -230711616 - L1PA10 LINE L1 -679 5489 5335 598 227 37 12 chr2 19976636 19976799 -230711055 - L1M4 LINE L1 -1185 5459 5293 1502 243 26 31 chr2 19976805 19977188 -230710666 - L1M4 LINE L1 -5672 870 490 1361 228 99 50 chr2 19977198 19977497 -230710357 - L1M4 LINE L1 -6119 423 97 784 203 0 0 chr2 19977497 19977630 -230710224 + FLAM_C SINE Alu 1 133 0 1361 228 99 50 chr2 19977630 19977733 -230710121 - L1M4 LINE L1 -6445 97 1 2116 112 0 0 chr2 19977769 19978063 -230709791 - AluSg SINE Alu -16 294 1 357 167 0 0 chr2 19978063 19978123 -230709731 + MER69 DNA AcHobo 2467 2526 0 1406 205 35 35 chr2 19978408 19978749 -230709105 + MER58B DNA MER1_type 1 341 0 282 319 25 4 chr2 19979108 19979298 -230708556 + HERVR LTR ERV1 3950 4206 -3019 28 86 0 0 chr2 19979307 19979377 -230708477 + AT_rich Low_complexity Low_complexity 1 70 0 1754 130 48 0 chr2 19979558 19979850 -230708004 - AluSx SINE Alu 0 305 1 830 103 0 9 chr2 19980285 19980401 -230707453 + FLAM_C SINE Alu 3 117 -26 857 195 0 65 chr2 19980790 19980990 -230706864 - AluJ SINE Alu -14 298 112 498 222 94 0 chr2 19981329 19981446 -230706408 - MER58B DNA MER1_type 0 341 214 662 178 0 0 chr2 19981462 19981569 -230706285 - AluJ SINE Alu -203 109 3 2185 117 0 0 chr2 19982573 19982881 -230704973 - AluSx SINE Alu -4 308 1 195 296 110 19 chr2 19983203 19983343 -230704511 - MIR SINE MIR -63 145 22 226 193 72 84 chr2 19983844 19983927 -230703927 + MIR SINE MIR 110 191 -71 269 229 0 16 chr2 19984174 19984235 -230703619 - MER58A DNA MER1_type 0 224 165 1558 221 52 27 chr2 19984235 19984638 -230703216 - LTR47B LTR ERVL 0 443 31 1478 136 23 125 chr2 19984649 19985002 -230702852 - AluYb8 SINE Alu -1 317 1 819 198 76 0 chr2 19985042 19985199 -230702655 - MER58A DNA MER1_type -55 169 1 1005 127 19 0 chr2 19985809 19985966 -230701888 - AluSg/x SINE Alu -27 285 126 235 225 191 0 chr2 19988590 19988679 -230699175 - MLT1I LTR MaLR -26 383 278 324 295 54 39 chr2 19988843 19988972 -230698882 - MLT1I LTR MaLR -266 143 13 2275 92 0 6 chr2 19988979 19989293 -230698561 + AluSx SINE Alu 1 312 0 31 26 0 0 chr2 19990396 19990434 -230697420 + AT_rich Low_complexity Low_complexity 1 38 0 821 128 8 0 chr2 19990434 19990551 -230697303 - FLAM_C SINE Alu -15 118 1 1238 135 0 0 chr2 19991137 19991307 -230696547 + AluSx SINE Alu 2 171 -141 582 153 0 10 chr2 19992810 19992908 -230694946 - Tigger7 DNA MER2_type -1 2490 2394 1209 207 4 0 chr2 19992909 19993136 -230694718 - Tigger7 DNA MER2_type -2222 265 38 2530 243 59 22 chr2 19993621 19994333 -230693521 - MER21B LTR ERV1 -124 739 2 1720 142 12 12 chr2 19995402 19995656 -230692198 + AluSx SINE Alu 37 290 -22 279 183 28 70 chr2 19995657 19995728 -230692126 + MLT1I LTR MaLR 270 337 -72 1808 229 103 52 chr2 19995879 19996217 -230691637 + MER21B LTR ERV1 143 462 -401 768 197 0 0 chr2 19996217 19996339 -230691515 + FLAM_A SINE Alu 1 122 -11 1808 229 103 52 chr2 19996339 19996620 -230691234 + MER21B LTR ERV1 462 794 -69 317 113 75 0 chr2 19996654 19996707 -230691147 + MLT1I LTR MaLR 335 391 -18 685 80 0 0 chr2 19997123 19997211 -230690643 - 5S rRNA rRNA -33 88 1 2180 85 3 14 chr2 19997307 19997601 -230690253 - AluSc SINE Alu 0 309 19 814 142 63 0 chr2 19997641 19997768 -230690086 + FLAM_C SINE Alu 1 135 -8 2056 139 13 3 chr2 19998235 19998536 -230689318 + AluSx SINE Alu 4 307 -5 1529 126 0 0 chr2 19998693 19998916 -230688938 - L1PA14 LINE L1 -10 6151 5929 1596 225 16 31 chr2 19999346 19999733 -230688121 - MER57B LTR ERV1 -1 433 53 2500 101 0 0 chr2 19999738 20000045 -230687809 + AluSx SINE Alu 1 307 -5 2082 135 99 6 chr2 20000081 20000414 -230687440 - THE1B LTR MaLR 0 364 1 637 224 0 0 chr2 20000456 20000600 -230687254 + FLAM_A SINE Alu 1 144 0 2394 93 3 10 chr2 20001890 20002223 -230685631 - AluSx SINE Alu 0 331 1 284 120 20 0 chr2 20002421 20002471 -230685383 + CT-rich Low_complexity Low_complexity 3 53 0 757 220 8 0 chr2 20002471 20002603 -230685251 - FLAM_A SINE Alu 0 133 1 916 327 40 43 chr2 20002708 20003333 -230684521 - MER57-int LTR ERV1 -1338 6199 5573 2336 110 0 0 chr2 20003333 20003633 -230684221 - AluSc SINE Alu -9 300 1 916 327 40 43 chr2 20003633 20003865 -230683989 - MER57-int LTR ERV1 -1964 5573 2174 561 151 0 0 chr2 20003896 20003982 -230683872 + FAM SINE Alu 88 173 -12 376 221 0 0 chr2 20003983 20004069 -230683785 - L1 LINE L1 -3368 3799 3714 * 12017 181 23 36 chr2 20004056 20007357 -230680497 - L1 LINE L1 -3709 3458 195 2487 51 34 0 chr2 20007357 20007651 -230680203 - AluY SINE Alu -7 304 1 12017 181 23 36 chr2 20007651 20007832 -230680022 - L1 LINE L1 -6972 195 13 12547 116 77 27 chr2 20008219 20009355 -230678499 - L1PBa LINE L1 -3430 3432 2354 2217 128 3 3 chr2 20009355 20009653 -230678201 - AluSq SINE Alu -15 298 1 12547 116 77 27 chr2 20009653 20010670 -230677184 - L1PBa LINE L1 -4508 2354 1116 2334 48 0 0 chr2 20010670 20010943 -230676911 - AluY SINE Alu -4 307 35 12547 116 77 27 chr2 20010943 20011467 -230676387 - L1PBa LINE L1 -5746 1116 620 824 194 100 0 chr2 20011447 20011627 -230676227 - L1PBa LINE L1 -6663 200 3 * 21 0 0 0 chr2 20013066 20013087 -230674767 + AT_rich Low_complexity Low_complexity 1 21 0 2211 107 3 19 chr2 20013087 20013397 -230674457 + AluSp SINE Alu 1 305 -8 861 156 0 0 chr2 20013430 20013552 -230674302 - AluJ SINE Alu -23 289 168 2181 71 21 7 chr2 20013821 20014124 -230673730 - AluSq SINE Alu 0 307 1 2343 91 3 0 chr2 20014264 20014560 -230673294 - AluSp SINE Alu -16 297 1 356 250 0 0 chr2 20014676 20014756 -230673098 - MER96 DNA MER1_type? 0 175 96 186 314 127 34 chr2 20014804 20014922 -230672932 + MIR SINE MIR 119 247 -15 454 198 20 20 chr2 20015078 20015179 -230672675 + MER5B DNA MER1_type 4 104 -74 22 35 0 0 chr2 20016528 20016557 -230671297 + AT_rich Low_complexity Low_complexity 1 29 0 1210 160 0 11 chr2 20017008 20017189 -230670665 - AluJ SINE Alu -133 179 1 718 278 71 31 chr2 20017584 20017839 -230670015 - MER57B-int LTR ERV1 -7270 267 3 1474 205 79 70 chr2 20017843 20018273 -230669581 - MER57B LTR ERV1 0 434 1 2158 92 3 14 chr2 20019460 20019754 -230668100 + AluSx SINE Alu 1 291 -21 2301 115 3 0 chr2 20020009 20020305 -230667549 - AluSp SINE Alu -16 297 1 197 171 12 37 chr2 20020838 20020920 -230666934 + CT-rich Low_complexity Low_complexity 2 81 0 378 215 131 8 chr2 20022068 20022198 -230665656 - LTR50 LTR ERVL -577 218 73 473 288 122 40 chr2 20022257 20022535 -230665319 + L2 LINE L2 2962 3262 -10 822 258 190 5 chr2 20022663 20022884 -230664970 - MIR SINE MIR 0 262 1 372 185 97 18 chr2 20023337 20023470 -230664384 - MIR SINE MIR -62 146 11 275 126 18 189 chr2 20024334 20024445 -230663409 + MER53 DNA DNA 3 94 -95 * 305 202 48 0 chr2 20024374 20024458 -230663396 - MER53 DNA DNA -8 181 94 261 0 0 0 chr2 20024742 20024771 -230663083 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1218 201 81 116 chr2 20024774 20024912 -230662942 + MLT2B1 LTR ERVL 2 143 -377 1486 164 9 4 chr2 20024912 20025143 -230662711 - AluSx SINE Alu -80 232 1 1218 201 81 116 chr2 20025143 20025461 -230662393 + MLT2B1 LTR ERVL 143 442 -78 1721 168 25 11 chr2 20025504 20025784 -230662070 - AluJb SINE Alu -22 290 7 384 22 0 0 chr2 20025814 20025859 -230661995 + (CA)n Simple_repeat Simple_repeat 2 46 0 642 207 21 14 chr2 20025897 20026037 -230661817 + MER5A DNA MER1_type 39 179 -10 1993 122 72 31 chr2 20026294 20026654 -230661200 + THE1C LTR MaLR 1 375 0 261 290 70 30 chr2 20026814 20026914 -230660940 + MIR SINE MIR 48 151 -57 914 310 28 5 chr2 20027086 20027509 -230660345 + ERVL LTR ERVL 3116 3548 -2216 247 210 0 16 chr2 20027710 20027772 -230660082 + (TTCA)n Simple_repeat Simple_repeat 4 64 0 200 236 179 80 chr2 20027857 20027886 -230659968 + L2 LINE L2 1657 1682 -1632 1840 157 0 46 chr2 20027886 20028191 -230659663 + AluJo SINE Alu 1 291 -21 200 236 179 80 chr2 20028191 20028373 -230659481 + L2 LINE L2 1682 1889 -1425 495 347 99 39 chr2 20028395 20028567 -230659287 + L2 LINE L2 2554 2714 -558 2060 158 45 21 chr2 20028567 20028948 -230658906 - MLT1B LTR MaLR 0 390 1 495 347 99 39 chr2 20028948 20029256 -230658598 + L2 LINE L2 2714 3054 -218 298 313 12 0 chr2 20029294 20029377 -230658477 + L2 LINE L2 3226 3309 -4 707 252 88 35 chr2 20029577 20029958 -230657896 + MLT1H LTR MaLR 3 389 -166 311 308 109 14 chr2 20030525 20030746 -230657108 + L1ME3A LINE L1 5707 5948 -222 1937 161 7 0 chr2 20031547 20031852 -230656002 + AluJo SINE Alu 1 307 -5 339 319 35 18 chr2 20031972 20032085 -230655769 + MIR SINE MIR 40 154 -108 39 22 0 0 chr2 20032765 20032811 -230655043 + AT_rich Low_complexity Low_complexity 1 46 0 574 225 125 12 chr2 20032928 20033088 -230654766 - MER5A DNA MER1_type -2 187 10 289 122 65 9 chr2 20033370 20033477 -230654377 + (CA)n Simple_repeat Simple_repeat 2 114 0 1884 148 27 20 chr2 20033627 20033925 -230653929 - AluJb SINE Alu -12 300 1 273 232 161 18 chr2 20033928 20034040 -230653814 + L2 LINE L2 2623 2750 -564 1124 164 86 33 chr2 20034107 20034351 -230653503 + MER68 LTR ERV1 3 259 -303 249 33 0 0 chr2 20034371 20034401 -230653453 + (GA)n Simple_repeat Simple_repeat 2 31 0 2249 107 0 0 chr2 20034416 20034705 -230653149 - AluSc SINE Alu -20 289 1 1988 170 61 15 chr2 20034705 20035100 -230652754 - MLT2C2 LTR ERVL -49 415 3 2376 95 0 3 chr2 20035102 20035408 -230652446 + AluSx SINE Alu 2 306 -6 1192 194 54 67 chr2 20035418 20035732 -230652122 + MER68 LTR ERV1 249 558 -4 180 312 104 13 chr2 20035818 20035895 -230651959 + L2 LINE L2 2937 3020 -252 445 199 176 0 chr2 20035895 20036026 -230651828 - MLT1G1 LTR MaLR 0 555 402 502 322 7 7 chr2 20036061 20036213 -230651641 - MLT1G1 LTR MaLR -220 375 224 206 185 93 19 chr2 20036525 20036579 -230651275 + L2 LINE L2 3151 3208 -64 2859 135 71 29 chr2 20036883 20037403 -230650451 + L1PB4 LINE L1 5613 6154 -2 209 161 0 0 chr2 20038250 20038281 -230649573 + polypyrimidine Low_complexity Low_complexity 2 32 0 774 160 0 8 chr2 20038303 20038422 -230649432 - FLAM_C SINE Alu -15 118 1 406 264 96 2 chr2 20038568 20038688 -230649166 - MIR SINE MIR -60 148 28 1814 163 57 0 chr2 20039064 20039230 -230648624 - AluJo SINE Alu -12 300 110 306 0 0 0 chr2 20039230 20039264 -230648590 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1814 163 57 0 chr2 20039264 20039380 -230648474 - AluJo SINE Alu -202 110 2 231 318 0 0 chr2 20039387 20039453 -230648401 + L2 LINE L2 2980 3045 -227 1349 184 33 45 chr2 20040081 20040164 -230647690 - Charlie5 DNA MER1_type 0 2624 2541 2101 159 0 10 chr2 20040164 20040478 -230647376 + AluSx SINE Alu 1 311 -1 1349 184 33 45 chr2 20040478 20040790 -230647064 - Charlie5 DNA MER1_type -83 2541 2234 579 160 0 9 chr2 20040793 20040899 -230646955 - Charlie5 DNA MER1_type -2497 115 11 2501 68 0 3 chr2 20041258 20041568 -230646286 - AluY SINE Alu -2 309 1 2905 3 0 0 chr2 20041656 20041961 -230645893 - AluY SINE Alu -5 306 2 22 0 0 0 chr2 20042373 20042395 -230645459 + AT_rich Low_complexity Low_complexity 1 22 0 198 103 0 0 chr2 20042424 20042453 -230645401 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1964 142 7 0 chr2 20042721 20043023 -230644831 + AluSx SINE Alu 1 304 0 26 0 0 0 chr2 20043677 20043703 -230644151 + GC_rich Low_complexity Low_complexity 1 26 0 1548 175 15 58 chr2 20043954 20044280 -230643574 - AluJo SINE Alu 0 312 1 274 256 122 0 chr2 20044373 20044455 -230643399 - L2 LINE L2 -13 3259 3168 207 69 0 0 chr2 20044463 20044492 -230643362 + (CAGAGA)n Simple_repeat Simple_repeat 5 33 0 361 172 42 81 chr2 20045014 20045387 -230642467 + (TATTG)n Simple_repeat Simple_repeat 1 358 0 245 51 26 0 chr2 20045761 20045800 -230642054 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 32 0 0 chr2 20046459 20046490 -230641364 + GC_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 20047725 20047754 -230640100 + AT_rich Low_complexity Low_complexity 1 29 0 1007 189 22 0 chr2 20050567 20050747 -230637107 - MER5A DNA MER1_type -5 184 1 1754 161 34 10 chr2 20050981 20051272 -230636582 - AluJo SINE Alu -10 302 5 362 271 50 122 chr2 20051333 20051636 -230636218 - L2 LINE L2 -28 3244 2964 299 322 11 11 chr2 20052195 20052285 -230635569 - L2 LINE L2 -36 3236 3147 323 187 40 13 chr2 20052317 20052392 -230635462 - MLT1F LTR MaLR -465 77 1 543 194 121 0 chr2 20052394 20052518 -230635336 - MIR SINE MIR -91 171 33 266 321 166 25 chr2 20052565 20052842 -230635012 - L2 LINE L2 -629 2685 2370 1556 180 20 27 chr2 20053357 20053652 -230634202 + AluJo SINE Alu 8 300 -12 1811 164 0 30 chr2 20053698 20053996 -230633858 - AluJb SINE Alu -23 289 1 389 289 33 16 chr2 20054595 20054716 -230633138 + L2 LINE L2 3191 3313 0 1997 130 23 23 chr2 20054870 20055169 -230632685 + AluSx SINE Alu 1 299 -13 452 165 11 0 chr2 20055181 20055272 -230632582 + GA-rich Low_complexity Low_complexity 2 93 0 1390 148 28 5 chr2 20056633 20056849 -230631005 - AluJo SINE Alu -7 305 85 344 306 126 28 chr2 20056888 20057095 -230630759 + MIR3 SINE MIR 3 256 -6 280 281 117 39 chr2 20057188 20057316 -230630538 + L2 LINE L2 3168 3305 -8 873 158 0 0 chr2 20057344 20057477 -230630377 + AluJb SINE Alu 1 133 -179 31086 107 7 57 chr2 20057486 20063967 -230623887 + L1PA7 LINE L1 5 6154 0 195 129 0 0 chr2 20064027 20064058 -230623796 + (A)n Simple_repeat Simple_repeat 1 31 0 239 341 41 32 chr2 20064149 20064272 -230623582 + MER5A DNA MER1_type 63 186 -3 1003 183 0 50 chr2 20064531 20064733 -230623121 + AluJb SINE Alu 120 311 -1 2814 7 0 0 chr2 20066101 20066399 -230621455 + AluYa5 SINE Alu 1 298 -13 252 316 94 41 chr2 20067404 20067575 -230620279 + L2 LINE L2 3006 3185 -87 482 313 71 30 chr2 20067619 20067887 -230619967 + L3 LINE CR1 1275 1553 -24 374 273 74 8 chr2 20068136 20068257 -230619597 + L2 LINE L2 3184 3312 -1 384 293 78 0 chr2 20068466 20068582 -230619272 + L2 LINE L2 3184 3308 -5 637 213 8 0 chr2 20068745 20068872 -230618982 + MER45A DNA AcHobo 51 178 0 2176 119 18 49 chr2 20069386 20069773 -230618081 - THE1C LTR MaLR 0 375 1 2271 159 83 8 chr2 20070079 20070475 -230617379 - MSTB LTR MaLR 0 426 1 532 272 77 18 chr2 20070892 20071061 -230616793 - MIR3 SINE MIR -11 197 19 192 361 12 0 chr2 20071215 20071298 -230616556 - L2 LINE L2 -1 3271 3188 185 361 0 14 chr2 20071341 20071413 -230616441 - L3 LINE CR1 -62 1515 1445 205 330 177 7 chr2 20071573 20071692 -230616162 - MIR SINE MIR -1 207 70 274 321 128 24 chr2 20072233 20072482 -230615372 - L3 LINE CR1 -3 1574 1300 2227 103 14 3 chr2 20072862 20073153 -230614701 - AluSx SINE Alu -18 294 1 241 282 13 0 chr2 20073985 20074063 -230613791 + (TG)n Simple_repeat Simple_repeat 1 79 0 248 271 0 0 chr2 20075055 20075114 -230612740 + L2 LINE L2 3248 3306 -7 2270 137 98 3 chr2 20075117 20075503 -230612351 - MSTA LTR MaLR -2 426 4 234 263 92 99 chr2 20075775 20075927 -230611927 - MIR SINE MIR -56 206 56 245 280 9 103 chr2 20076699 20076748 -230611106 - MIR SINE MIR -70 192 156 2164 113 3 0 chr2 20076748 20077075 -230610779 - AluSq SINE Alu 0 328 1 245 280 9 103 chr2 20077075 20077131 -230610723 - MIR SINE MIR -106 156 96 1903 251 48 13 chr2 20077131 20077514 -230610340 + MER90 LTR ERV1 1 410 -165 2806 82 3 3 chr2 20077514 20077869 -230609985 + THE1A LTR MaLR 1 355 0 1903 251 48 13 chr2 20077869 20078032 -230609822 + MER90 LTR ERV1 410 566 -9 251 208 39 104 chr2 20078041 20078118 -230609736 - MIR SINE MIR -163 99 28 580 235 87 11 chr2 20078806 20078986 -230608868 - MIR SINE MIR -60 202 6 216 0 0 0 chr2 20079110 20079134 -230608720 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1002 244 85 3 chr2 20079134 20079441 -230608413 + LTR16A LTR ERVL 119 450 0 2366 89 20 0 chr2 20079706 20080009 -230607845 + AluSc SINE Alu 1 309 0 832 73 9 0 chr2 20080023 20080132 -230607722 + HY1 scRNA scRNA 2 111 -1 278 318 65 9 chr2 20080319 20080426 -230607428 - L2 LINE L2 -18 3254 3142 788 185 99 0 chr2 20080505 20080667 -230607187 + AluJo SINE Alu 120 297 -15 2277 104 0 16 chr2 20080669 20080998 -230606856 + AluSq SINE Alu 1 313 0 251 318 65 26 chr2 20081454 20081608 -230606246 + L2 LINE L2 2924 3083 -189 207 0 0 0 chr2 20082030 20082053 -230605801 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1928 146 30 7 chr2 20082177 20082478 -230605376 - AluSx SINE Alu -4 308 1 208 284 14 0 chr2 20082517 20082591 -230605263 + (TG)n Simple_repeat Simple_repeat 2 76 0 196 265 0 0 chr2 20083208 20083257 -230604597 - MIR SINE MIR -65 143 95 1616 188 34 28 chr2 20083949 20084306 -230603548 + MLT1A2 LTR MaLR 1 359 -15 212 283 0 19 chr2 20085248 20085301 -230602553 + G-rich Low_complexity Low_complexity 3 54 0 246 62 0 0 chr2 20085426 20085458 -230602396 + (TCCCC)n Simple_repeat Simple_repeat 2 33 0 2219 120 7 3 chr2 20085486 20085795 -230602059 - AluSx SINE Alu -2 310 1 272 191 62 80 chr2 20086165 20086278 -230601576 - MIR SINE MIR -67 141 47 187 323 92 0 chr2 20087864 20087929 -230599925 - L3 LINE CR1 -1 1576 1506 304 304 36 0 chr2 20088005 20088117 -230599737 + MLT1J2 LTR MaLR 39 154 -296 243 147 200 53 chr2 20088310 20088385 -230599469 + MLT1I LTR MaLR 315 400 -9 238 356 30 30 chr2 20088395 20088530 -230599324 - L3 LINE CR1 -107 1470 1336 2178 118 23 3 chr2 20088543 20088847 -230599007 - AluSx SINE Alu 0 312 3 816 204 16 54 chr2 20088875 20088965 -230598889 - MER5A DNA MER1_type -5 184 103 1762 176 19 53 chr2 20088965 20089340 -230598514 + MLT1A1 LTR MaLR 1 362 -3 816 204 16 54 chr2 20089340 20089435 -230598419 - MER5A DNA MER1_type -86 103 6 291 288 61 38 chr2 20089588 20089720 -230598134 + L2 LINE L2 3138 3272 0 195 225 11 34 chr2 20090454 20090543 -230597311 + CT-rich Low_complexity Low_complexity 1 87 0 712 265 78 24 chr2 20090551 20090921 -230596933 - L1MC5 LINE L1 -35 7926 7537 373 265 72 36 chr2 20091779 20091945 -230595909 + L1ME4a LINE L1 5436 5607 -514 1478 180 13 49 chr2 20091951 20091967 -230595887 - AluJo SINE Alu 0 312 297 190 0 0 0 chr2 20091967 20091988 -230595866 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1478 180 13 49 chr2 20091988 20092141 -230595713 - AluJo SINE Alu -15 297 145 2075 138 17 0 chr2 20092141 20092430 -230595424 - AluSx SINE Alu -12 300 7 1478 180 13 49 chr2 20092430 20092565 -230595289 - AluJo SINE Alu -167 145 7 610 270 95 5 chr2 20092579 20092801 -230595053 - L2 LINE L2 0 3313 3072 442 318 103 26 chr2 20092805 20093140 -230594714 + L1ME4a LINE L1 5608 5977 -144 2353 88 3 0 chr2 20093140 20093448 -230594406 + AluSq SINE Alu 1 309 -4 442 318 103 26 chr2 20093448 20093490 -230594364 + L1ME4a LINE L1 5977 6014 -107 405 288 8 38 chr2 20093950 20094082 -230593772 - MIR SINE MIR -115 147 20 508 260 80 30 chr2 20094380 20094580 -230593274 - MIR SINE MIR 0 262 53 1734 137 43 47 chr2 20094595 20094895 -230592959 - AluJb SINE Alu -13 299 1 266 111 0 0 chr2 20095030 20095075 -230592779 + MADE1 DNA Mariner 1 45 -35 490 276 19 26 chr2 20095140 20095296 -230592558 - MIR SINE MIR -105 157 3 347 320 35 23 chr2 20097515 20097571 -230590283 - MIR SINE MIR -6 256 202 324 0 0 0 chr2 20097571 20097607 -230590247 + (TG)n Simple_repeat Simple_repeat 1 36 0 347 320 35 23 chr2 20097607 20097625 -230590229 - MIR SINE MIR -60 202 186 3645 173 28 17 chr2 20097625 20098346 -230589508 - L1MB7 LINE L1 -19 6165 5437 347 320 35 23 chr2 20098346 20098442 -230589412 - MIR SINE MIR -76 186 83 211 298 14 116 chr2 20099225 20099440 -230588414 - L2 LINE L2 -95 3177 2985 1553 120 4 12 chr2 20099850 20100091 -230587763 + AluY SINE Alu 72 310 -1 2903 208 20 85 chr2 20100437 20101374 -230586480 - LTR5 LTR ERVK -93 876 1 2028 96 0 30 chr2 20101533 20101857 -230585997 - AluY SINE Alu 0 311 1 1384 249 62 48 chr2 20102132 20102794 -230585060 - L1MC5 LINE L1 -385 7576 6906 2014 88 3 114 chr2 20102806 20103158 -230584696 - AluSq SINE Alu 0 313 1 911 182 61 74 chr2 20103159 20103390 -230584464 - L1MC5 LINE L1 -1041 6920 6693 1793 202 16 47 chr2 20103390 20103776 -230584078 - MLT1A2 LTR MaLR 0 374 1 1549 269 58 33 chr2 20103783 20104035 -230583819 - L1MC5 LINE L1 -1866 5942 5698 1869 128 62 0 chr2 20104035 20104325 -230583529 - AluSx SINE Alu -4 308 1 1549 269 58 33 chr2 20104325 20104670 -230583184 - L1MC5 LINE L1 -2110 5698 5330 22 35 0 0 chr2 20104741 20104770 -230583084 + AT_rich Low_complexity Low_complexity 1 29 0 986 207 78 18 chr2 20106102 20106496 -230581358 + L1MC/D LINE L1 5067 5491 -743 847 252 48 9 chr2 20106920 20107150 -230580704 - MIR SINE MIR 0 262 24 468 203 15 60 chr2 20107289 20107392 -230580462 - MLT1J1 LTR MaLR -317 129 32 2135 113 0 43 chr2 20107392 20107718 -230580136 + AluSx SINE Alu 1 312 0 468 203 15 60 chr2 20107718 20107747 -230580107 - MLT1J1 LTR MaLR -414 32 3 1455 136 35 112 chr2 20107763 20108102 -230579752 - AluYb8 SINE Alu -5 313 1 265 242 55 86 chr2 20109013 20109141 -230578713 + MIR SINE MIR 61 184 -78 340 291 48 0 chr2 20109332 20109435 -230578419 + MLT1L LTR MaLR 195 302 -313 1731 137 3 61 chr2 20109443 20109771 -230578083 + AluJb SINE Alu 3 311 -1 477 176 130 38 chr2 20109860 20109991 -230577863 - MLT1C LTR MaLR -324 143 1 353 178 129 40 chr2 20110016 20110117 -230577737 - MLT1C LTR MaLR -352 115 6 747 289 81 65 chr2 20110125 20110954 -230576900 + L2 LINE L2 2481 3313 0 2287 100 0 0 chr2 20111811 20112122 -230575732 + AluSx SINE Alu 1 311 -1 284 295 86 60 chr2 20112303 20112427 -230575427 + L2 LINE L2 2618 2737 -577 2269 107 0 0 chr2 20112427 20112736 -230575118 + AluSx SINE Alu 1 309 -3 284 295 86 60 chr2 20112736 20112947 -230574907 + L2 LINE L2 2737 2962 -352 1594 251 42 20 chr2 20112956 20113406 -230574448 + MLT1C LTR MaLR 1 460 -7 277 373 85 0 chr2 20113730 20113848 -230574006 - L2 LINE L2 -4 3309 3182 182 340 21 21 chr2 20114059 20114153 -230573701 - MIR SINE MIR -61 147 54 2028 129 64 45 chr2 20114293 20114650 -230573204 - THE1B LTR MaLR 0 364 1 230 259 123 25 chr2 20115186 20115267 -230572587 - L2 LINE L2 0 3272 3184 2097 116 0 26 chr2 20116973 20117284 -230570570 - AluSx SINE Alu -9 303 1 189 331 88 38 chr2 20117459 20117722 -230570132 - L2 LINE L2 -344 2970 2695 1471 220 39 33 chr2 20117833 20118196 -230569658 + MLT1A1 LTR MaLR 1 365 0 389 235 35 35 chr2 20119796 20119911 -230567943 + MIR SINE MIR 20 134 -74 446 293 152 10 chr2 20119940 20120138 -230567716 - MIR SINE MIR -12 250 25 1419 221 140 35 chr2 20120140 20120234 -230567620 + MLT1D LTR MaLR 1 84 -421 1594 178 49 0 chr2 20120234 20120520 -230567334 + AluJb SINE Alu 1 300 -12 1419 221 140 35 chr2 20120520 20120882 -230566972 + MLT1D LTR MaLR 84 505 0 2126 128 0 0 chr2 20121970 20122275 -230565579 + AluSg SINE Alu 1 305 -5 318 294 18 9 chr2 20122783 20122892 -230564962 + MER94 DNA DNA 10 119 -15 320 197 15 15 chr2 20124929 20124995 -230562859 - MIR SINE MIR -176 86 21 539 271 127 14 chr2 20125148 20125369 -230562485 + MIR SINE MIR 17 262 0 180 176 0 0 chr2 20125421 20125455 -230562399 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 660 311 48 4 chr2 20126218 20126446 -230561408 - MIR SINE MIR -1 261 24 325 306 100 19 chr2 20126471 20126631 -230561223 - MIR SINE MIR -23 239 67 465 261 99 0 chr2 20127553 20127695 -230560159 - MER103 DNA DNA -9 157 2 274 306 162 14 chr2 20127921 20128137 -230559717 - L2 LINE L2 -40 3232 2985 1834 148 21 0 chr2 20129267 20129557 -230558297 - AluJb SINE Alu -16 296 1 291 214 71 0 chr2 20129557 20129618 -230558236 - L2 LINE L2 -7 3265 3197 1982 141 0 3 chr2 20130022 20130321 -230557533 - AluSx SINE Alu -14 298 1 371 294 76 0 chr2 20131254 20131373 -230556481 + MIR SINE MIR 16 143 -65 252 152 22 0 chr2 20131863 20131909 -230555945 + L2 LINE L2 3223 3269 -3 2031 125 3 10 chr2 20132571 20132882 -230554972 - AluSx SINE Alu -3 309 1 204 308 122 17 chr2 20133632 20133804 -230554050 - L2 LINE L2 -167 3105 2916 654 204 9 0 chr2 20133872 20133985 -230553869 + MER81 DNA DNA 1 114 0 872 164 68 53 chr2 20134634 20134870 -230552984 + AluJb SINE Alu 76 314 0 2071 97 35 3 chr2 20135119 20135409 -230552445 + AluSx SINE Alu 1 299 -13 742 106 176 24 chr2 20135414 20135584 -230552270 + L1MB4 LINE L1 5985 6180 0 * 1639 142 36 45 chr2 20135582 20135919 -230551935 + L1MD3 LINE L1 7652 7985 -10 3716 179 41 8 chr2 20136409 20137113 -230550741 - LTR8A LTR ERV1 0 727 1 417 330 86 14 chr2 20138321 20138542 -230549312 - MIR SINE MIR -6 256 20 226 200 36 0 chr2 20140075 20140130 -230547724 - L2 LINE L2 -213 3059 3003 247 286 26 13 chr2 20142375 20142452 -230545402 - MIR SINE MIR -110 152 75 391 274 76 30 chr2 20142714 20142911 -230544943 + MIR SINE MIR 47 252 -10 8353 79 5 10 chr2 20143925 20145002 -230542852 - MER11C LTR ERVK 0 1071 1 328 253 0 35 chr2 20145051 20145138 -230542716 - L2 LINE L2 -5 3308 3225 1415 192 58 10 chr2 20145147 20145599 -230542255 + MLT1F1 LTR MaLR 10 567 0 222 339 119 26 chr2 20145861 20146239 -230541615 - L2 LINE L2 -453 2861 2449 1580 214 35 6 chr2 20146429 20146771 -230541083 + MLT1A2 LTR MaLR 8 359 -15 1043 222 38 8 chr2 20146934 20147200 -230540654 + Charlie1b DNA MER1_type 53 326 -197 674 141 0 0 chr2 20147214 20147306 -230540548 + AluSx SINE Alu 2 93 -219 1347 118 29 0 chr2 20147363 20147567 -230540287 + AluSx SINE Alu 103 312 0 992 151 5 24 chr2 20147567 20147772 -230540082 + Charlie1b DNA MER1_type 323 523 0 205 200 0 22 chr2 20148747 20148792 -230539062 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 190 292 97 0 chr2 20149493 20149565 -230538289 + L2 LINE L2 2985 3063 -209 650 210 0 8 chr2 20149613 20149732 -230538122 + FLAM_C SINE Alu 2 119 -24 2047 86 0 0 chr2 20149858 20150126 -230537728 + AluY SINE Alu 40 307 -4 199 208 236 0 chr2 20150205 20150277 -230537577 - L2 LINE L2 -2 3311 3223 290 333 119 6 chr2 20151331 20151508 -230536346 + MIR SINE MIR 63 259 -3 1884 171 14 112 chr2 20152061 20152290 -230535564 - MSTD LTR MaLR 0 396 229 1820 149 7 7 chr2 20152290 20152586 -230535268 - AluJb SINE Alu -16 296 1 1884 171 14 112 chr2 20152586 20152795 -230535059 - MSTD LTR MaLR -167 229 1 1791 227 53 27 chr2 20153022 20153472 -230534382 - LTR40b LTR ERVL 0 462 1 2022 85 67 0 chr2 20153615 20153897 -230533957 + AluSq SINE Alu 1 301 -12 826 224 12 0 chr2 20154495 20154665 -230533189 - MER45A DNA AcHobo -5 173 2 345 160 53 0 chr2 20154799 20154893 -230532961 + CT-rich Low_complexity Low_complexity 2 100 0 391 249 89 30 chr2 20155249 20155418 -230532436 - HAL1 LINE L1 -105 2402 2224 454 193 132 89 chr2 20156246 20156459 -230531395 - HAL1 LINE L1 -891 1616 1395 192 267 100 0 chr2 20158263 20158323 -230529531 - MIR3 SINE MIR -34 174 109 1158 127 0 11 chr2 20158597 20158941 -230528913 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 425 296 40 0 chr2 20159807 20159932 -230527922 - MIR SINE MIR -56 152 23 340 333 113 6 chr2 20160377 20160554 -230527300 + L2 LINE L2 3074 3269 -3 213 191 24 0 chr2 20160591 20160633 -230527221 + L2 LINE L2 3261 3303 -10 260 296 12 0 chr2 20160699 20160780 -230527074 + (CA)n Simple_repeat Simple_repeat 1 82 0 4118 191 27 46 chr2 20160876 20161372 -230526482 + MER21B LTR ERV1 1 476 -387 1913 154 3 3 chr2 20161372 20161683 -230526171 + AluJo SINE Alu 1 311 -1 4118 191 27 46 chr2 20161683 20162064 -230525790 + MER21B LTR ERV1 476 862 -1 257 159 63 0 chr2 20162428 20162491 -230525363 - MIR3 SINE MIR -38 170 104 623 175 3 1 chr2 20162961 20163074 -230524780 + MER5A DNA MER1_type 4 106 -72 328 321 57 13 chr2 20163359 20163518 -230524336 - L3 LINE CR1 -68 1509 1344 2038 145 3 0 chr2 20163648 20163959 -230523895 - AluSx SINE Alu 0 312 1 2323 95 0 0 chr2 20165776 20166082 -230521772 - AluSq SINE Alu -7 306 1 313 342 52 36 chr2 20166217 20166410 -230521444 - MIR SINE MIR -16 246 51 566 287 165 6 chr2 20167431 20167776 -230520078 - L2 LINE L2 -298 3015 2622 202 298 106 21 chr2 20167901 20167995 -230519859 - L2 LINE L2 -37 3235 3134 729 181 90 23 chr2 20168604 20168781 -230519073 + MER53 DNA DNA 1 189 0 278 333 65 0 chr2 20171152 20171275 -230516579 - MIR SINE MIR -62 146 16 412 304 163 9 chr2 20171641 20171868 -230515986 + MIR SINE MIR 1 262 0 226 186 14 129 chr2 20172165 20172235 -230515619 + MLT1E2 LTR MaLR 1 62 -564 516 261 46 20 chr2 20172238 20172391 -230515463 + MLT1C LTR MaLR 1 157 -348 619 194 60 8 chr2 20172400 20172534 -230515320 + MLT1C LTR MaLR 284 424 -43 442 333 36 0 chr2 20173991 20174178 -230513676 + MIR SINE MIR 4 200 -62 1583 153 47 14 chr2 20175158 20175456 -230512398 - AluJb SINE Alu 0 307 1 186 176 29 0 chr2 20175789 20175823 -230512031 + L2 LINE L2 3263 3297 -16 352 303 125 7 chr2 20177831 20177983 -230509871 - MIR SINE MIR -7 255 86 2081 136 3 3 chr2 20179411 20179720 -230508134 + AluSx SINE Alu 1 309 -3 619 294 22 15 chr2 20179755 20179986 -230507868 + L1ME4a LINE L1 5316 5548 -616 1686 215 97 63 chr2 20180450 20180511 -230507343 - MLT1E1 LTR MaLR -4 650 593 2287 112 0 0 chr2 20180511 20180823 -230507031 - AluSx SINE Alu 0 312 1 1686 215 97 63 chr2 20180823 20181346 -230506508 - MLT1E1 LTR MaLR -61 593 46 442 250 0 10 chr2 20182407 20182511 -230505343 - LTR67 LTR ERVL -22 535 433 594 315 25 30 chr2 20184424 20184471 -230503383 - MIR SINE MIR -15 247 201 528 225 117 0 chr2 20184471 20184591 -230503263 - MER94 DNA DNA 0 134 1 594 315 25 30 chr2 20184591 20184778 -230503076 - MIR SINE MIR -61 201 14 230 248 353 20 chr2 20185026 20185179 -230502675 - MIR SINE MIR -22 240 37 444 278 150 32 chr2 20186123 20186529 -230501325 + L1ME4a LINE L1 5515 5968 -153 1020 86 0 0 chr2 20186808 20186948 -230500906 + AluY SINE Alu 171 310 -1 235 268 118 0 chr2 20187303 20187430 -230500424 + L1ME4a LINE L1 5978 6119 -2 1758 103 7 39 chr2 20187519 20187800 -230500054 - AluSq SINE Alu -41 272 1 329 338 58 29 chr2 20188215 20188493 -230499361 - L3 LINE CR1 -202 1375 1090 218 350 29 0 chr2 20189946 20190049 -230497805 - MIR SINE MIR -77 185 80 1824 149 28 0 chr2 20190748 20191037 -230496817 - AluSx SINE Alu -15 297 1 655 174 35 0 chr2 20191340 20191455 -230496399 + AluSg/x SINE Alu 124 242 -68 237 266 231 6 chr2 20191551 20191720 -230496134 + L2 LINE L2 2553 2759 -555 506 224 75 0 chr2 20191723 20191830 -230496024 - MLT1D LTR MaLR -3 464 350 745 261 62 28 chr2 20191866 20192135 -230495719 - MLT1D LTR MaLR -190 277 1 622 254 131 30 chr2 20192136 20192607 -230495247 + L2 LINE L2 2756 3283 -30 186 43 0 0 chr2 20192613 20192636 -230495218 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 190 330 10 10 chr2 20193143 20193240 -230494614 + MIR SINE MIR 44 140 -68 508 249 75 35 chr2 20193257 20193430 -230494424 + MER117 DNA MER1_type 1 180 -17 1719 224 17 8 chr2 20193836 20194198 -230493656 - MLT1A1 LTR MaLR 0 365 1 342 277 0 24 chr2 20194446 20194529 -230493325 + MER91A DNA MER1_type 101 181 -15 2026 184 8 19 chr2 20195467 20195832 -230492022 + MLT1A1 LTR MaLR 3 363 -2 245 336 76 8 chr2 20196550 20196681 -230491173 + MIR3 SINE MIR 23 162 -46 3217 121 14 24 chr2 20197206 20197709 -230490145 - MER1A DNA MER1_type 0 529 32 2580 42 0 0 chr2 20197719 20198030 -230489824 - AluYa5 SINE Alu 0 311 1 360 0 0 0 chr2 20198782 20198822 -230489032 + (CA)n Simple_repeat Simple_repeat 2 41 0 267 250 40 48 chr2 20198934 20199058 -230488796 + MIR3 SINE MIR 68 190 -18 627 270 169 17 chr2 20199686 20200030 -230487824 + L1ME4a LINE L1 5721 6116 -5 22 0 0 0 chr2 20200030 20200052 -230487802 + AT_rich Low_complexity Low_complexity 1 22 0 2286 103 12 6 chr2 20200609 20200940 -230486914 + THE1B LTR MaLR 1 333 -31 958 50 0 0 chr2 20200940 20201061 -230486793 - AluY SINE Alu -1 310 190 4367 174 19 23 chr2 20201858 20202941 -230484913 + L1MB8 LINE L1 5098 6178 0 231 286 26 39 chr2 20203010 20203087 -230484767 + MIR SINE MIR 40 115 -93 444 301 173 9 chr2 20203691 20203915 -230483939 - MIR SINE MIR -11 251 1 3215 183 43 56 chr2 20204606 20205393 -230482461 - L1MB5 LINE L1 -13 6161 5385 5058 214 33 22 chr2 20205883 20206329 -230481525 - L1MB5 LINE L1 -744 5402 4962 2127 128 0 0 chr2 20206329 20206626 -230481228 - AluSx SINE Alu -15 297 1 5058 214 33 22 chr2 20206626 20207463 -230480391 - L1MB5 LINE L1 -1184 4962 4102 2328 88 3 0 chr2 20207463 20207770 -230480084 + AluSp SINE Alu 1 308 -5 5058 214 33 22 chr2 20207770 20207833 -230480021 - L1MB5 LINE L1 -2044 4102 4041 4449 142 21 27 chr2 20209214 20209960 -230477894 - L1MC1 LINE L1 0 6333 5592 1777 213 67 40 chr2 20209978 20210472 -230477382 - L1ME1 LINE L1 -7 6159 5653 895 224 25 0 chr2 20211200 20211401 -230476453 - MIR SINE MIR -2 260 55 2955 203 32 6 chr2 20211478 20212108 -230475746 - L1MB7 LINE L1 -9 6175 5530 1580 216 45 75 chr2 20213054 20213522 -230474332 + MLT1C LTR MaLR 6 459 -8 216 0 0 0 chr2 20216926 20216950 -230470904 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 272 380 51 28 chr2 20218764 20218980 -230468874 - MIR SINE MIR -27 235 15 421 294 28 0 chr2 20219358 20219501 -230468353 - MIR SINE MIR -59 203 57 285 321 83 13 chr2 20219735 20219930 -230467924 + MIR SINE MIR 13 212 -50 210 162 0 0 chr2 20221321 20221358 -230466496 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 433 269 52 0 chr2 20224907 20225041 -230462813 + L1ME3 LINE L1 6002 6142 -20 311 237 11 32 chr2 20225554 20225647 -230462207 - MIR SINE MIR -63 145 55 250 356 0 34 chr2 20226120 20226297 -230461557 + CT-rich Low_complexity Low_complexity 1 171 0 * 336 419 0 0 chr2 20226175 20226342 -230461512 + C-rich Low_complexity Low_complexity 1 167 0 792 209 36 52 chr2 20226443 20226692 -230461162 - L1ME1 LINE L1 -606 5568 5324 2117 113 0 7 chr2 20226699 20226999 -230460855 - AluSc SINE Alu -11 298 1 2196 112 0 7 chr2 20227001 20227304 -230460550 - AluY SINE Alu -10 301 1 382 207 190 17 chr2 20227763 20227879 -230459975 - MER5A DNA MER1_type -6 183 48 187 263 53 0 chr2 20228191 20228248 -230459606 + MER5A DNA MER1_type 78 137 -52 401 150 0 0 chr2 20229519 20229579 -230458275 + AluS SINE Alu 2 61 -257 1545 145 0 0 chr2 20229629 20229863 -230457991 + AluSg/x SINE Alu 67 300 -12 236 286 14 0 chr2 20229898 20229968 -230457886 - L2 LINE L2 -178 3094 3024 1717 153 19 26 chr2 20231466 20231779 -230456075 - AluJo SINE Alu -1 311 1 1948 156 0 9 chr2 20232442 20232757 -230455097 + AluJb SINE Alu 1 312 0 1699 201 13 29 chr2 20233065 20233517 -230454337 + MER89 LTR ERV1 3 545 -14 323 310 101 0 chr2 20234244 20234400 -230453454 - MIR SINE MIR -49 159 23 218 242 30 136 chr2 20236507 20236639 -230451215 + MIR SINE MIR 53 170 -92 204 329 73 0 chr2 20236638 20236738 -230451116 + MIR SINE MIR 17 129 -79 * 592 229 68 36 chr2 20236803 20236995 -230450859 - MER112 DNA MER1_type -39 221 24 23 0 0 0 chr2 20237266 20237289 -230450565 + GC_rich Low_complexity Low_complexity 1 23 0 304 286 95 0 chr2 20238109 20238235 -230449619 - MIR SINE MIR -56 206 69 286 226 128 0 chr2 20239471 20239573 -230448281 + MER5C DNA MER1_type 2 116 -208 336 182 143 0 chr2 20239605 20239682 -230448172 + MER5C DNA MER1_type 233 320 -4 317 225 12 12 chr2 20239917 20239997 -230447857 - MIR SINE MIR -72 190 111 408 200 120 0 chr2 20240544 20240644 -230447210 - MIR SINE MIR -43 219 108 183 271 51 0 chr2 20243054 20243113 -230444741 - L2 LINE L2 -12 3301 3240 1741 150 0 36 chr2 20243878 20244185 -230443669 + AluJo SINE Alu 1 296 -16 394 326 190 14 chr2 20244447 20244879 -230442975 + L2 LINE L2 1991 2498 -816 484 270 172 34 chr2 20245166 20245462 -230442392 + L2 LINE L2 2915 3251 -21 295 286 62 26 chr2 20247047 20247239 -230440615 - MIR SINE MIR -45 217 19 359 313 230 10 chr2 20247391 20247691 -230440163 + L2 LINE L2 876 1241 -2073 439 110 315 24 chr2 20247739 20247866 -230439988 + MER5A DNA MER1_type 5 168 -21 358 227 27 0 chr2 20247907 20247982 -230439872 - MER58B DNA MER1_type -8 333 257 2873 279 142 21 chr2 20248101 20249759 -230438095 + L2 LINE L2 1445 3309 -4 205 322 0 0 chr2 20250105 20250164 -230437690 - MIR3 SINE MIR -50 158 100 198 243 81 0 chr2 20250745 20250819 -230437035 + L2 LINE L2 3172 3251 -21 195 217 17 17 chr2 20250934 20250994 -230436860 + MIR SINE MIR 86 145 -117 405 344 119 19 chr2 20253029 20253459 -230434395 - L2 LINE L2 -665 2649 2177 212 238 38 95 chr2 20254293 20254398 -230433456 - L2 LINE L2 -182 3090 2992 1851 147 47 3 chr2 20255047 20255346 -230432508 - AluJo SINE Alu 0 312 1 266 240 19 39 chr2 20255509 20255613 -230432241 - L2 LINE L2 -1274 2040 1939 1962 159 88 11 chr2 20255644 20256079 -230431775 - MER31A LTR ERV1 -12 649 4 486 284 85 13 chr2 20256217 20256534 -230431320 - L1ME4a LINE L1 -13 6108 5769 264 266 63 25 chr2 20257372 20257530 -230430324 - L1ME4a LINE L1 -747 5399 5236 681 227 142 45 chr2 20257708 20257955 -230429899 - LTR16A LTR ERVL -118 332 62 1404 241 71 80 chr2 20258020 20258192 -230429662 - L1MC4 LINE L1 -72 7970 7798 2493 101 24 24 chr2 20258192 20258567 -230429287 - THE1C LTR MaLR 0 375 1 1404 241 71 80 chr2 20258567 20258670 -230429184 - L1MC4 LINE L1 -244 7798 7696 2669 19 0 13 chr2 20258670 20258984 -230428870 - AluYa5 SINE Alu -1 310 1 1404 241 71 80 chr2 20258984 20259329 -230428525 - L1MC4 LINE L1 -346 7696 7355 418 318 98 47 chr2 20259331 20259737 -230428117 - L1ME4a LINE L1 -951 5195 4769 322 287 24 37 chr2 20260310 20260474 -230427380 - L1ME LINE L1 -551 5570 5409 321 287 47 67 chr2 20260483 20260633 -230427221 - L3 LINE CR1 -820 757 611 222 37 0 0 chr2 20261163 20261190 -230426664 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 248 358 47 28 chr2 20261421 20261636 -230426218 - MIR SINE MIR -32 230 10 187 281 188 0 chr2 20262447 20262543 -230425311 - MIR SINE MIR -62 146 33 1477 155 45 31 chr2 20263124 20263415 -230424439 + AluJo SINE Alu 18 312 0 337 296 162 22 chr2 20263416 20263595 -230424259 + L3 LINE CR1 1374 1577 0 396 295 78 36 chr2 20264409 20264575 -230423279 + MIR SINE MIR 56 228 -34 252 276 0 0 chr2 20265165 20265223 -230422631 - MIR SINE MIR -57 151 94 26 0 0 0 chr2 20267337 20267363 -230420491 + GC_rich Low_complexity Low_complexity 1 26 0 234 0 0 0 chr2 20267495 20267521 -230420333 + (CGG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr2 20267577 20267599 -230420255 + GC_rich Low_complexity Low_complexity 1 22 0 241 262 60 0 chr2 20269866 20269950 -230417904 + MIR3 SINE MIR 85 173 -35 27 49 0 0 chr2 20271192 20271233 -230416621 + GC_rich Low_complexity Low_complexity 1 41 0 181 222 0 0 chr2 20275737 20275773 -230412081 + L3b LINE CR1 1546 1581 -2 180 0 0 0 chr2 20278089 20278109 -230409745 + (CAG)n Simple_repeat Simple_repeat 3 22 0 1666 205 103 0 chr2 20282564 20282915 -230404939 - MSTD LTR MaLR 0 396 10 270 262 246 0 chr2 20282923 20283045 -230404809 + MIR SINE MIR 56 207 -55 331 255 129 20 chr2 20283910 20284080 -230403774 - MIR SINE MIR -14 248 43 21 0 0 0 chr2 20284158 20284179 -230403675 + AT_rich Low_complexity Low_complexity 1 21 0 1125 211 97 7 chr2 20284227 20284525 -230403329 - L1MC4 LINE L1 -135 7907 7583 711 176 7 37 chr2 20284526 20284662 -230403192 - FLAM_C SINE Alu -1 132 1 186 329 55 0 chr2 20288177 20288250 -230399604 - L2 LINE L2 0 3313 3237 277 370 109 18 chr2 20288380 20288710 -230399144 - L2 LINE L2 -338 2976 2617 2971 45 8 0 chr2 20288960 20289317 -230398537 - L1PA7 LINE L1 0 6154 5795 476 278 58 23 chr2 20290959 20291132 -230396722 - MIR SINE MIR -35 227 49 1606 189 10 7 chr2 20291288 20291595 -230396259 - AluJb SINE Alu -4 308 1 212 376 65 0 chr2 20292234 20292327 -230395527 - L2 LINE L2 -40 3232 3134 580 281 104 13 chr2 20293102 20293333 -230394521 + MIR SINE MIR 2 253 -9 436 245 71 92 chr2 20295524 20295569 -230392285 - MIR SINE MIR 0 262 218 2425 71 10 0 chr2 20295569 20295865 -230391989 - AluSg SINE Alu -10 300 2 436 245 71 92 chr2 20295865 20296093 -230391761 - MIR SINE MIR -44 218 9 458 292 118 40 chr2 20296947 20297447 -230390407 + L2 LINE L2 2003 2541 -773 652 221 96 0 chr2 20297876 20298084 -230389770 + Charlie4 DNA MER1_type 37 264 -1697 418 209 82 0 chr2 20298129 20298239 -230389615 + Charlie4 DNA MER1_type 1840 1958 -3 248 340 60 0 chr2 20298266 20298366 -230389488 - L2 LINE L2 0 3313 3208 2230 104 27 0 chr2 20298525 20298823 -230389031 + AluSg SINE Alu 1 306 -4 26 0 0 0 chr2 20298898 20298924 -230388930 + AT_rich Low_complexity Low_complexity 1 26 0 1163 197 75 7 chr2 20300760 20301055 -230386799 - MER33 DNA MER1_type -4 320 6 307 271 141 31 chr2 20302410 20302602 -230385252 - L1 LINE L1 -3784 2362 2150 2064 99 25 3 chr2 20302960 20303243 -230384611 - AluSp SINE Alu -24 289 1 416 273 85 62 chr2 20303291 20303713 -230384141 - HAL1 LINE L1 -6 2501 2070 744 277 155 40 chr2 20303939 20304268 -230383586 - L2 LINE L2 -1 3312 2946 288 294 116 22 chr2 20304540 20304815 -230383039 + L1ME4a LINE L1 5754 6054 -67 1268 267 134 45 chr2 20304853 20305726 -230382128 - HAL1 LINE L1 -423 2084 1134 885 194 55 20 chr2 20306029 20306230 -230381624 + MER3 DNA MER1_type 2 209 0 1072 209 7 62 chr2 20306753 20307026 -230380828 + L1MEc LINE L1 39 296 -6100 1805 213 25 64 chr2 20307033 20307596 -230380258 + MER74B LTR ERVL 59 599 -23 621 228 91 53 chr2 20307610 20307895 -230379959 + L1MEc LINE L1 296 591 -5805 3088 125 4 6 chr2 20307905 20308377 -230379477 + MER1A DNA MER1_type 56 526 -3 1351 213 18 3 chr2 20308382 20308710 -230379144 + L1MEc LINE L1 587 919 -5477 2924 168 45 24 chr2 20308710 20309156 -230378698 + L1MB7 LINE L1 4903 5338 -846 1993 137 55 3 chr2 20309156 20309499 -230378355 + MER46B DNA MER2_type 1 236 0 2924 168 45 24 chr2 20309499 20310015 -230377839 + L1MB7 LINE L1 5338 5894 -290 1435 264 42 28 chr2 20310018 20310661 -230377193 + L1M4 LINE L1 2954 3605 -2541 198 0 0 0 chr2 20310702 20310724 -230377130 + (TG)n Simple_repeat Simple_repeat 2 23 0 309 287 11 11 chr2 20310724 20310811 -230377043 + L1MC4 LINE L1 6618 6704 -1338 * 321 211 11 63 chr2 20310792 20310887 -230376967 - L1MC4 LINE L1 -1339 6703 6614 405 236 184 51 chr2 20310942 20311235 -230376619 + MLT1E2 LTR MaLR 1 332 -294 2313 58 11 0 chr2 20311239 20311516 -230376338 + AluY SINE Alu 17 296 -15 30017 89 13 8 chr2 20311536 20316008 -230371846 + L1PA6 LINE L1 11 4503 -1643 6803 51 0 0 chr2 20316008 20316837 -230371017 + L1PA6 LINE L1 5300 6135 -19 204 40 0 0 chr2 20316837 20316862 -230370992 + (TA)n Simple_repeat Simple_repeat 2 26 0 574 209 81 27 chr2 20316866 20317123 -230370731 + MLT1E2 LTR MaLR 326 503 -2 939 256 85 25 chr2 20317123 20317629 -230370225 + L1P5 LINE L1 4894 5431 -720 248 192 48 48 chr2 20317791 20317895 -230369959 + L1MA4 LINE L1 3224 3327 -4238 183 42 0 0 chr2 20317895 20317919 -230369935 + (TG)n Simple_repeat Simple_repeat 2 25 0 801 182 8 0 chr2 20317919 20318051 -230369803 - AluJb SINE Alu -28 284 152 14951 168 32 14 chr2 20318092 20321532 -230366322 + L1MA4 LINE L1 3344 6853 -743 822 117 8 0 chr2 20321532 20321659 -230366195 + L1PB1 LINE L1 6020 6148 -3 4566 144 30 20 chr2 20321693 20322210 -230365644 + L1MA4 LINE L1 6851 7382 -337 2196 82 13 20 chr2 20322210 20322514 -230365340 + AluSx SINE Alu 4 305 -7 4566 144 30 20 chr2 20322514 20322854 -230365000 + L1MA4 LINE L1 7382 7717 -2 1558 256 81 14 chr2 20322886 20323502 -230364352 + L1ME3A LINE L1 5434 6073 -97 22 56 0 0 chr2 20323569 20323605 -230364249 + AT_rich Low_complexity Low_complexity 1 36 0 296 301 75 53 chr2 20324450 20324583 -230363271 + L2 LINE L2 3137 3272 0 643 254 33 77 chr2 20325902 20326201 -230361653 + MLT1J LTR MaLR 224 509 -2 204 67 0 0 chr2 20327117 20327147 -230360707 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 757 183 7 0 chr2 20327208 20327345 -230360509 + FLAM_C SINE Alu 1 138 -5 27 29 0 0 chr2 20329521 20329555 -230358299 + AT_rich Low_complexity Low_complexity 1 34 0 830 131 21 0 chr2 20329761 20329906 -230357948 - L1MD1 LINE L1 -1 6635 6488 1091 147 0 18 chr2 20329917 20330080 -230357774 - FRAM SINE Alu -24 152 1 3200 149 7 4 chr2 20330092 20330648 -230357206 - L1MD1 LINE L1 -254 6382 5825 1328 229 12 114 chr2 20330661 20331259 -230356595 - L1MD1 LINE L1 -1059 5481 4945 1851 159 54 11 chr2 20331259 20331629 -230356225 + MSTA LTR MaLR 1 386 -42 2730 199 99 153 chr2 20331646 20332976 -230354878 - L1MD1 LINE L1 -1592 4948 3548 767 163 0 22 chr2 20332976 20333111 -230354743 - FLAM_C SINE Alu -6 137 6 2730 199 99 153 chr2 20333111 20333350 -230354504 - L1MD1 LINE L1 -2992 3548 3353 1634 175 11 14 chr2 20333350 20333511 -230354343 - AluJo SINE Alu -16 296 135 2128 131 0 13 chr2 20333511 20333817 -230354037 - AluJb SINE Alu -10 302 1 1634 175 11 14 chr2 20333817 20333940 -230353914 - AluJo SINE Alu -177 135 13 2730 199 99 153 chr2 20333940 20334124 -230353730 - L1MD1 LINE L1 -3187 3353 3161 6634 206 106 17 chr2 20334184 20336248 -230351606 - L1MD1 LINE L1 -3768 2772 348 2197 115 0 0 chr2 20336273 20336561 -230351293 + AluSx SINE Alu 1 288 -24 2822 164 54 5 chr2 20336593 20337148 -230350706 + MER34C LTR ERV1 4 585 0 1552 176 42 10 chr2 20337154 20337461 -230350393 - L1MD1 LINE L1 -6208 332 16 273 363 18 9 chr2 20337707 20337820 -230350034 - MIR3 SINE MIR -82 126 13 2988 122 69 29 chr2 20337843 20338085 -230349769 + MER41C LTR ERV1 3 234 -320 2125 113 0 0 chr2 20338085 20338404 -230349450 + AluSg SINE Alu 1 319 0 2988 122 69 29 chr2 20338404 20338683 -230349171 + MER41C LTR ERV1 234 546 -8 206 157 14 143 chr2 20338701 20338771 -230349083 + MIR3 SINE MIR 139 199 -9 585 203 171 6 chr2 20339137 20339295 -230348559 + MIR SINE MIR 40 223 -39 316 270 11 0 chr2 20339366 20339455 -230348399 - MIR SINE MIR -54 208 119 1428 158 17 8 chr2 20340481 20340721 -230347133 - AluJo SINE Alu -70 242 1 3014 175 35 13 chr2 20340723 20341636 -230346218 - L1MC1 LINE L1 -507 5826 4891 1913 175 25 35 chr2 20341637 20342072 -230345782 - L1MA7 LINE L1 -201 6090 5660 2378 241 22 10 chr2 20342095 20342879 -230344975 - L1MCa LINE L1 -3163 3263 2450 249 27 0 0 chr2 20342905 20342942 -230344912 - AluJb SINE Alu -2 300 264 1460 142 0 17 chr2 20342942 20343174 -230344680 - AluJb SINE Alu -84 228 1 2360 125 142 43 chr2 20343177 20343426 -230344428 - L1MCa LINE L1 -3973 2453 2230 864 0 0 0 chr2 20343426 20343525 -230344329 - L1PA2 LINE L1 0 6155 6057 2360 125 142 43 chr2 20343525 20343833 -230344021 - L1MCa LINE L1 -4196 2230 1841 * 6162 170 24 44 chr2 20343828 20345231 -230342623 - L1MCa LINE L1 -5048 1378 3 1298 241 29 26 chr2 20345219 20345600 -230342254 - L1ME LINE L1 -471 5699 5318 * 767 142 35 30 chr2 20345600 20345769 -230342085 + L1MA8 LINE L1 6117 6286 -5 558 329 62 22 chr2 20345887 20346209 -230341645 - L2 LINE L2 -132 3181 2847 387 271 101 12 chr2 20347874 20348070 -230339784 - MIR SINE MIR -16 246 1 571 250 47 0 chr2 20349152 20349280 -230338574 - L2 LINE L2 0 3272 3139 183 279 0 49 chr2 20349589 20349650 -230338204 - L2 LINE L2 -345 2968 2911 2160 140 0 0 chr2 20350133 20350433 -230337421 - AluSx SINE Alu -10 302 3 3064 117 45 0 chr2 20350791 20351262 -230336592 + L1PA16 LINE L1 5665 6156 -10 581 272 135 66 chr2 20351913 20351983 -230335871 + HAL1 LINE L1 984 1048 -1459 1985 157 0 19 chr2 20351983 20352301 -230335553 - AluJo SINE Alu 0 312 1 581 272 135 66 chr2 20352301 20352579 -230335275 + HAL1 LINE L1 1048 1356 -1151 401 215 11 11 chr2 20352587 20352680 -230335174 - MLT1C LTR MaLR 0 467 375 828 241 64 0 chr2 20352748 20352968 -230334886 - MLT1D LTR MaLR 0 505 272 330 67 0 0 chr2 20353077 20353122 -230334732 + (CAA)n Simple_repeat Simple_repeat 2 46 0 600 272 74 6 chr2 20353737 20353899 -230333955 + L2 LINE L2 2843 3015 -298 1965 244 71 62 chr2 20353945 20354316 -230333538 + L1MC4 LINE L1 6943 7309 -733 1977 136 6 43 chr2 20354316 20354639 -230333215 + AluSx SINE Alu 1 311 -1 1965 244 71 62 chr2 20354639 20355226 -230332628 + L1MC4 LINE L1 7309 7914 -128 390 21 0 0 chr2 20355226 20355273 -230332581 + (TG)n Simple_repeat Simple_repeat 2 48 0 1965 244 71 62 chr2 20355273 20355404 -230332450 + L1MC4 LINE L1 7914 8042 0 295 219 34 164 chr2 20355434 20355672 -230332182 + L2 LINE L2 3077 3283 -30 659 295 88 68 chr2 20355680 20356135 -230331719 + HAL1 LINE L1 349 794 -1713 2324 101 0 10 chr2 20356135 20356441 -230331413 - AluSx SINE Alu -9 303 1 659 295 88 68 chr2 20356441 20356893 -230330961 + HAL1 LINE L1 794 1274 -1233 349 258 61 8 chr2 20356942 20357074 -230330780 + HAL1 LINE L1 1388 1526 -981 2039 217 30 40 chr2 20357656 20358181 -230329673 + MLT2B1 LTR ERVL 1 520 0 441 328 36 36 chr2 20358368 20358618 -230329236 + L1MEd LINE L1 811 1060 -5059 2226 208 47 55 chr2 20360458 20361053 -230326801 - MLT1E LTR MaLR -3 590 1 21 36 0 0 chr2 20361375 20361403 -230326451 + AT_rich Low_complexity Low_complexity 1 28 0 195 289 13 40 chr2 20361552 20361628 -230326226 - L2 LINE L2 -184 3088 3015 525 220 8 8 chr2 20361777 20361909 -230325945 + L1PA16 LINE L1 6030 6161 -5 408 237 178 8 chr2 20362181 20362417 -230325437 - L1ME4a LINE L1 -245 5876 5601 586 197 146 0 chr2 20363478 20363615 -230324239 - MER5A DNA MER1_type -2 187 31 252 307 43 17 chr2 20364870 20365000 -230322854 + MIR SINE MIR 21 150 -63 219 285 111 35 chr2 20365263 20365407 -230322447 + L2 LINE L2 1587 1741 -1573 1232 250 122 47 chr2 20365580 20366096 -230321758 - MLT1H1 LTR MaLR 0 555 1 377 189 95 116 chr2 20366161 20366351 -230321503 + MER112 DNA MER1_type 2 187 -73 992 248 62 30 chr2 20366386 20366725 -230321129 + MLT1I LTR MaLR 60 409 0 6449 174 66 52 chr2 20367322 20368822 -230319032 + MER52A LTR ERV1 235 1755 0 288 284 80 0 chr2 20371135 20371223 -230316631 + MIR3 SINE MIR 108 202 -6 1641 229 96 43 chr2 20372784 20373347 -230314507 + MLT1E LTR MaLR 1 593 0 452 291 79 79 chr2 20373399 20373653 -230314201 - MIR SINE MIR 0 262 9 405 366 42 0 chr2 20374219 20374361 -230313493 + L2 LINE L2 3125 3272 0 236 316 18 0 chr2 20374492 20374549 -230313305 + L2 LINE L2 3242 3299 -14 508 339 44 24 chr2 20375335 20375583 -230312271 - MIR SINE MIR -9 253 1 1080 132 33 11 chr2 20375593 20375775 -230312079 - MER5A DNA MER1_type 0 189 4 310 325 139 71 chr2 20375928 20376180 -230311674 + L2 LINE L2 2954 3222 -50 213 244 0 0 chr2 20376214 20376259 -230311595 + MIR3 SINE MIR 153 197 -11 541 256 38 37 chr2 20377138 20377313 -230310541 + MIR SINE MIR 2 178 -63 2036 121 52 0 chr2 20377683 20377973 -230309881 - AluSx SINE Alu -7 305 1 921 146 0 0 chr2 20378345 20378482 -230309372 + LTR5 LTR ERVK 1 137 -832 204 159 0 23 chr2 20379186 20379230 -230308624 + (TA)n Simple_repeat Simple_repeat 1 43 0 1470 107 5 18 chr2 20379528 20379752 -230308102 + L1PA8A LINE L1 5909 6129 -2 21 57 0 0 chr2 20380035 20380070 -230307784 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr2 20380498 20380526 -230307328 + AT_rich Low_complexity Low_complexity 1 28 0 1071 157 51 0 chr2 20382365 20382543 -230305311 + MER5A DNA MER1_type 3 189 0 558 219 51 0 chr2 20382640 20382777 -230305077 - L1MCb LINE L1 -2343 4221 4078 337 250 10 0 chr2 20382779 20382883 -230304971 - L1MCb LINE L1 -2660 3904 3800 3819 232 104 31 chr2 20382887 20383972 -230303882 - L1MCb LINE L1 -2803 3761 2756 1800 187 0 3 chr2 20383972 20384272 -230303582 - AluJb SINE Alu -13 299 1 3819 232 104 31 chr2 20384272 20384383 -230303471 - L1MCb LINE L1 -3808 2756 2654 1781 194 0 3 chr2 20384383 20384682 -230303172 + AluJb SINE Alu 1 298 -14 3819 232 104 31 chr2 20384682 20384862 -230302992 - L1MCb LINE L1 -3910 2654 2488 2072 139 0 7 chr2 20384862 20385171 -230302683 + AluJb SINE Alu 1 307 -5 3819 232 104 31 chr2 20385171 20386466 -230301388 - L1MCb LINE L1 -4076 2488 1288 2017 116 7 3 chr2 20386466 20386751 -230301103 - AluSx SINE Alu -26 286 1 3819 232 104 31 chr2 20386751 20387543 -230300311 - L1MCb LINE L1 -5276 1288 52 2079 158 7 0 chr2 20387543 20387853 -230300001 - AluSx SINE Alu 0 312 1 3819 232 104 31 chr2 20387853 20387909 -230299945 - L1MCb LINE L1 -6512 52 1 1175 181 93 41 chr2 20389414 20389757 -230298097 + MLT1A1 LTR MaLR 5 365 0 1682 116 154 7 chr2 20389915 20390207 -230297647 + MER1B DNA MER1_type 2 336 -1 252 309 57 57 chr2 20390735 20390929 -230296925 + L2 LINE L2 2634 2827 -487 1101 205 62 4 chr2 20391458 20391702 -230296152 + MIR SINE MIR 2 259 -3 247 304 40 20 chr2 20391983 20392131 -230295723 - L1P LINE L1 -1119 5027 4877 315 288 81 0 chr2 20392209 20392320 -230295534 - L1M4 LINE L1 -1355 4791 4672 27 49 0 0 chr2 20392395 20392436 -230295418 + AT_rich Low_complexity Low_complexity 1 41 0 763 178 100 33 chr2 20392521 20392701 -230295153 - MIR SINE MIR 0 262 71 201 269 19 0 chr2 20392872 20392924 -230294930 + MIR SINE MIR 208 260 -2 930 76 0 2 chr2 20393033 20393175 -230294679 + L1PA8 LINE L1 6015 6154 -14 475 278 223 4 chr2 20393352 20393625 -230294229 - L2 LINE L2 -14 3299 2967 382 357 66 0 chr2 20393778 20393960 -230293894 - L2 LINE L2 -428 2886 2693 2093 208 20 25 chr2 20393967 20394251 -230293603 + L1M4 LINE L1 3329 3613 -2533 2372 126 5 30 chr2 20394251 20394624 -230293230 - THE1B LTR MaLR 0 364 1 2093 208 20 25 chr2 20394624 20394930 -230292924 + L1M4 LINE L1 3613 3916 -2230 257 226 0 0 chr2 20394930 20394983 -230292871 + MER69 DNA AcHobo 624 676 -550 186 43 0 0 chr2 20395940 20395963 -230291891 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 342 0 0 0 chr2 20396207 20396245 -230291609 + (CA)n Simple_repeat Simple_repeat 1 38 0 298 296 17 26 chr2 20396374 20396489 -230291365 + L2 LINE L2 301 414 -2900 234 385 70 5 chr2 20396693 20396906 -230290948 + L2 LINE L2 584 810 -2504 643 200 107 0 chr2 20396912 20397062 -230290792 - MER5A DNA MER1_type -21 168 3 670 299 147 33 chr2 20397427 20397751 -230290103 + HAL1 LINE L1 427 713 -1794 652 204 9 0 chr2 20397751 20397864 -230289990 - MER81 DNA DNA 0 114 1 670 299 147 33 chr2 20397864 20398117 -230289737 + HAL1 LINE L1 713 1070 -1437 * 1503 234 168 44 chr2 20398114 20398813 -230289041 + HAL1 LINE L1 1315 2147 -360 316 40 40 0 chr2 20398813 20398863 -230288991 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 1503 234 168 44 chr2 20398863 20399042 -230288812 + HAL1 LINE L1 2147 2302 -205 810 101 0 0 chr2 20399044 20399153 -230288701 + AluSg/x SINE Alu 188 296 -16 227 175 52 103 chr2 20399161 20399202 -230288652 + HAL1 LINE L1 2306 2348 -159 1997 153 0 3 chr2 20399202 20399509 -230288345 + AluSx SINE Alu 1 306 -6 227 175 52 103 chr2 20399509 20399564 -230288290 + HAL1 LINE L1 2348 2397 -110 1474 149 20 92 chr2 20399607 20399997 -230287857 - L1MA4A LINE L1 -3 6300 5939 356 340 59 30 chr2 20400360 20400731 -230287123 + L1M4 LINE L1 4989 5370 -776 2170 115 3 16 chr2 20400875 20401189 -230286665 - AluY SINE Alu -1 310 1 349 287 108 54 chr2 20401253 20401339 -230286515 + L1ME4a LINE L1 5852 5932 -189 228 35 0 0 chr2 20401339 20401368 -230286486 + (CA)n Simple_repeat Simple_repeat 2 30 0 349 287 108 54 chr2 20401368 20401504 -230286350 + L1ME4a LINE L1 5932 6086 -35 387 60 0 0 chr2 20402190 20402240 -230285614 + (TG)n Simple_repeat Simple_repeat 1 50 0 303 222 56 78 chr2 20402241 20402331 -230285523 - L1MC4 LINE L1 -1341 6701 6614 2022 121 0 0 chr2 20402347 20402611 -230285243 - AluSx SINE Alu -48 264 1 740 193 47 18 chr2 20403041 20403212 -230284642 + LTR41 LTR ERVL 6 181 -592 1063 193 43 5 chr2 20403266 20403473 -230284381 + MER20 DNA MER1_type 1 215 -4 231 136 0 45 chr2 20404139 20404183 -230283671 + LTR41 LTR ERVL 731 772 -1 246 253 108 0 chr2 20404482 20404565 -230283289 + L1M4 LINE L1 5495 5586 -592 315 302 121 60 chr2 20404834 20405016 -230282838 - HAL1 LINE L1 -2314 193 1 26 0 0 0 chr2 20406144 20406170 -230281684 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr2 20406933 20406965 -230280889 + AT_rich Low_complexity Low_complexity 1 32 0 3113 256 111 45 chr2 20407000 20407423 -230280431 + L1M4 LINE L1 2947 3341 -2805 183 42 0 0 chr2 20407423 20407447 -230280407 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3113 256 111 45 chr2 20407447 20408629 -230279225 + L1M4 LINE L1 3341 4444 -1702 2296 60 20 10 chr2 20408629 20408927 -230278927 + AluY SINE Alu 1 301 -10 3113 256 111 45 chr2 20408927 20409360 -230278494 + L1M4 LINE L1 4444 5135 -1011 2050 97 7 58 chr2 20409360 20409669 -230278185 + AluSc SINE Alu 2 294 -15 3113 256 111 45 chr2 20409669 20409764 -230278090 + L1M4 LINE L1 5135 5222 -924 195 184 0 0 chr2 20409767 20409805 -230278049 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 321 224 149 0 chr2 20409887 20409994 -230277860 + L1M LINE L1 5258 5380 -786 1535 237 117 28 chr2 20410247 20410844 -230277010 - MLT1G LTR MaLR 0 590 5 1846 146 48 13 chr2 20410949 20411265 -230276589 + MER1B DNA MER1_type 1 327 -12 2377 38 7 3 chr2 20411273 20411566 -230276288 - AluY SINE Alu -15 296 3 2312 77 3 3 chr2 20411736 20412035 -230275819 - AluY SINE Alu -12 299 1 811 198 21 103 chr2 20413085 20413328 -230274526 - MIR SINE MIR -20 242 20 567 281 90 31 chr2 20413587 20414248 -230273606 - L1MC4a LINE L1 -748 5398 5214 1425 163 0 4 chr2 20414702 20414929 -230272925 - AluJb SINE Alu -2 310 85 3511 235 84 19 chr2 20415351 20417617 -230270237 + L1MD2 LINE L1 1296 3718 -2822 401 202 155 8 chr2 20417731 20417860 -230269994 + L1MD2 LINE L1 4129 4276 -2264 2651 203 133 5 chr2 20417869 20418543 -230269311 + L1MD2 LINE L1 5992 6752 -1 21 36 0 0 chr2 20418544 20418572 -230269282 + AT_rich Low_complexity Low_complexity 1 28 0 13041 26 0 0 chr2 20419717 20422026 -230265828 + L1PA5 LINE L1 3838 6151 -3 24 0 0 0 chr2 20422082 20422106 -230265748 + AT_rich Low_complexity Low_complexity 1 24 0 2228 53 43 0 chr2 20422380 20422541 -230265313 - AluY SINE Alu -17 294 114 189 94 0 0 chr2 20422541 20422573 -230265281 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2228 53 43 0 chr2 20422573 20422693 -230265161 - AluY SINE Alu -197 114 1 1910 153 46 17 chr2 20423750 20423886 -230263968 - LTR23 LTR ERV1 0 467 336 2725 13 3 0 chr2 20423886 20424187 -230263667 - AluYb8 SINE Alu -3 315 14 1910 153 46 17 chr2 20424187 20424469 -230263385 - LTR23 LTR ERV1 -131 336 1 942 167 29 0 chr2 20424469 20424643 -230263211 + Tigger1 DNA MER2_type 2240 2418 0 566 189 68 74 chr2 20424648 20424838 -230263016 - MSTB2 LTR MaLR -57 400 212 1118 230 60 0 chr2 20424863 20425115 -230262739 - LTR39 LTR ERV1 0 783 517 2143 150 142 0 chr2 20425122 20425523 -230262331 + MER66B LTR ERV1 27 484 -2 2551 181 17 25 chr2 20425524 20426049 -230261805 - LTR39 LTR ERV1 -262 521 1 740 159 34 10 chr2 20426049 20426212 -230261642 - MSTB2 LTR MaLR -270 156 1 273 273 0 11 chr2 20426226 20426314 -230261540 + MLT1I LTR MaLR 323 409 0 2002 158 54 31 chr2 20426408 20426795 -230261059 - MSTC LTR MaLR 0 428 33 259 68 0 0 chr2 20426795 20426839 -230261015 + L1MA3 LINE L1 6262 6305 0 1795 186 34 44 chr2 20426879 20427315 -230260539 + MSTB1 LTR MaLR 1 432 0 308 111 0 19 chr2 20427361 20427415 -230260439 - MSTC LTR MaLR 0 428 376 718 152 0 146 chr2 20427451 20427580 -230260274 - AluJo SINE Alu -84 228 126 351 0 0 0 chr2 20427580 20427619 -230260235 + (CA)n Simple_repeat Simple_repeat 2 40 0 718 152 0 146 chr2 20427619 20427653 -230260201 - AluJo SINE Alu -186 126 89 566 132 0 115 chr2 20427672 20427711 -230260143 - MSTC LTR MaLR -36 392 350 2091 82 21 14 chr2 20427711 20428022 -230259832 + AluY SINE Alu 1 313 0 566 132 0 115 chr2 20428022 20428208 -230259646 - MSTC LTR MaLR -78 350 89 197 300 186 7 chr2 20428433 20428573 -230259281 - L2 LINE L2 -6 3307 3143 1136 217 112 42 chr2 20428618 20429139 -230258715 - MLT1F1 LTR MaLR 0 567 1 1399 212 10 10 chr2 20429431 20429723 -230258131 - AluJb SINE Alu -18 294 3 779 147 7 7 chr2 20429724 20429860 -230257994 - AluJb SINE Alu -176 136 1 1783 135 87 34 chr2 20430070 20430256 -230257598 + THE1C LTR MaLR 1 176 -199 243 0 0 0 chr2 20430256 20430283 -230257571 + (TC)n Simple_repeat Simple_repeat 1 27 0 1783 135 87 34 chr2 20430283 20430452 -230257402 + THE1C LTR MaLR 176 375 0 1550 191 62 0 chr2 20430652 20430925 -230256929 - AluJo SINE Alu -22 290 1 306 243 45 9 chr2 20431266 20431377 -230256477 + MLT1K LTR MaLR 466 580 -8 22 35 0 0 chr2 20432835 20432864 -230254990 + AT_rich Low_complexity Low_complexity 1 29 0 232 222 19 0 chr2 20433153 20433207 -230254647 + (TA)n Simple_repeat Simple_repeat 2 56 0 1136 197 13 21 chr2 20433669 20433903 -230253951 + MLT1D LTR MaLR 1 232 -273 774 182 28 93 chr2 20433908 20434122 -230253732 + MLT1D LTR MaLR 206 405 -100 1099 94 0 0 chr2 20434125 20434285 -230253569 + AluY SINE Alu 145 304 -7 556 139 9 37 chr2 20434286 20434394 -230253460 + MLT1D LTR MaLR 399 503 -2 23 68 0 0 chr2 20434696 20434740 -230253114 + AT_rich Low_complexity Low_complexity 1 44 0 961 139 12 0 chr2 20434798 20434971 -230252883 + C-rich Low_complexity Low_complexity 4 178 0 255 61 0 0 chr2 20434971 20435004 -230252850 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 520 199 42 12 chr2 20435831 20435997 -230251857 - L1MC5 LINE L1 -176 7785 7615 1397 203 75 7 chr2 20436486 20436767 -230251087 - AluJo SINE Alu -9 303 4 408 267 112 43 chr2 20437247 20437434 -230250420 - L1 LINE L1 -2368 3778 3579 2118 107 28 14 chr2 20437665 20437954 -230249900 - AluSc SINE Alu -16 293 1 745 272 18 9 chr2 20438442 20438659 -230249195 + MLT1I LTR MaLR 174 392 -17 24 53 0 0 chr2 20438835 20438873 -230248981 + AT_rich Low_complexity Low_complexity 1 38 0 3255 186 17 0 chr2 20439170 20439832 -230248022 + L1PB4 LINE L1 5482 6154 -2 296 109 0 0 chr2 20439855 20439901 -230247953 + L1MA3 LINE L1 5395 5440 -865 5655 106 8 17 chr2 20439936 20440820 -230247034 + L1MA3 LINE L1 5428 6303 -2 31 26 0 0 chr2 20440828 20440866 -230246988 + AT_rich Low_complexity Low_complexity 1 38 0 282 56 0 0 chr2 20442090 20442126 -230245728 + (TG)n Simple_repeat Simple_repeat 2 37 0 257 346 37 22 chr2 20442317 20442453 -230245401 + L2 LINE L2 2709 2846 -468 645 268 94 75 chr2 20442703 20443180 -230244674 + MLT1J LTR MaLR 26 511 0 1706 181 0 30 chr2 20443221 20443520 -230244334 - AluJb SINE Alu -18 294 5 338 132 0 19 chr2 20444269 20444322 -230243532 - MIR3 SINE MIR -30 178 127 24 0 0 0 chr2 20444388 20444412 -230243442 + AT_rich Low_complexity Low_complexity 1 24 0 227 231 77 0 chr2 20445522 20445587 -230242267 + LTR37A LTR ERV1 149 218 -208 1743 148 0 0 chr2 20446485 20446735 -230241119 + AluSq SINE Alu 1 250 -63 185 236 9 132 chr2 20446896 20447002 -230240852 - MIR SINE MIR -70 192 100 1665 186 30 19 chr2 20448272 20448637 -230239217 + MLT2D LTR ERVL 1 369 -45 1864 202 3 0 chr2 20448638 20449000 -230238854 + MER47A DNA MER2_type 2 364 -2 255 109 73 36 chr2 20449038 20449093 -230238761 + MLT2D LTR ERVL 464 520 0 1624 278 48 33 chr2 20449108 20449549 -230238305 - MLT1G1 LTR MaLR -2 593 160 2278 101 3 0 chr2 20449549 20449846 -230238008 - AluSx SINE Alu -14 298 1 1624 278 48 33 chr2 20449846 20449877 -230237977 - MLT1G1 LTR MaLR -435 160 131 497 205 180 12 chr2 20449877 20450038 -230237816 - MER53 DNA DNA 0 189 2 1624 278 48 33 chr2 20450038 20450144 -230237710 - MLT1G1 LTR MaLR -464 131 5 325 264 50 99 chr2 20450323 20450505 -230237349 - MLT1G1-int LTR MaLR -171 1200 1028 1515 150 124 4 chr2 20450938 20451204 -230236650 + AluJb SINE Alu 1 298 -14 1118 208 64 0 chr2 20451204 20451454 -230236400 + MER58B DNA MER1_type 76 341 0 769 220 55 48 chr2 20452014 20452318 -230235536 - MLT1C LTR MaLR -12 441 151 381 167 14 0 chr2 20452318 20452390 -230235464 + AluS SINE Alu 1 73 -230 788 157 15 82 chr2 20452509 20452777 -230235077 + L1MB8 LINE L1 5909 6158 -20 1901 162 0 3 chr2 20452777 20453086 -230234768 - AluSx SINE Alu -4 308 1 398 158 24 25 chr2 20453163 20453256 -230234598 - L1MB7 LINE L1 -122 6058 5959 * 5407 224 60 27 chr2 20453244 20455126 -230232728 - L1M4 LINE L1 -961 5421 3479 1584 221 71 30 chr2 20455126 20455728 -230232126 - L1M4 LINE L1 -3180 3202 2576 1387 215 6 0 chr2 20455801 20456136 -230231718 - L1 LINE L1 -1545 4601 4265 4695 157 56 10 chr2 20456137 20457480 -230230374 + L1PA16 LINE L1 4718 6156 -10 674 230 81 90 chr2 20457501 20457802 -230230052 - L1M4 LINE L1 -3910 2474 2179 1969 119 36 4 chr2 20457802 20458080 -230229774 - AluSx SINE Alu 0 312 26 674 230 81 90 chr2 20458080 20458335 -230229519 - L1M4 LINE L1 -4205 2179 1923 360 96 0 0 chr2 20458469 20458521 -230229333 + AluSg/x SINE Alu 215 266 -34 * 531 183 58 67 chr2 20458520 20458711 -230229143 - MLT1C LTR MaLR -300 205 7 649 272 55 1 chr2 20458729 20458963 -230228891 + MLT1G LTR MaLR 10 265 -290 688 216 115 32 chr2 20459071 20459349 -230228505 + MER33 DNA MER1_type 23 323 -1 255 284 0 0 chr2 20459621 20459694 -230228160 + MIR SINE MIR 47 119 -89 32 91 0 0 chr2 20459836 20459924 -230227930 + AT_rich Low_complexity Low_complexity 1 88 0 288 186 0 0 chr2 20459998 20460057 -230227797 + (TG)n Simple_repeat Simple_repeat 2 60 0 873 195 78 10 chr2 20461408 20461613 -230226241 + MER20 DNA MER1_type 1 219 0 618 210 0 29 chr2 20461629 20461767 -230226087 - FLAM_A SINE Alu -8 134 1 352 304 204 4 chr2 20464879 20465139 -230222715 - L2 LINE L2 -852 2462 2151 285 136 17 68 chr2 20465207 20465266 -230222588 + L2 LINE L2 3217 3272 0 220 349 113 33 chr2 20465931 20466143 -230221711 - L2 LINE L2 -191 3081 2853 21 57 0 0 chr2 20466381 20466416 -230221438 + AT_rich Low_complexity Low_complexity 1 35 0 263 361 23 15 chr2 20466505 20466635 -230221219 + MIR SINE MIR 19 149 -59 23 54 0 0 chr2 20468629 20468666 -230219188 + AT_rich Low_complexity Low_complexity 1 37 0 395 190 64 2 chr2 20468666 20468783 -230219071 - L1MA9 LINE L1 -7 6290 6166 2011 234 55 22 chr2 20469027 20469665 -230218189 + L1MC4 LINE L1 5254 5912 -1896 229 197 0 42 chr2 20469709 20469780 -230218074 + L1MC4 LINE L1 5894 5961 -1847 6098 156 23 6 chr2 20469918 20471808 -230216046 + L1PA15 LINE L1 4022 5945 -220 3046 267 82 18 chr2 20471934 20473317 -230214537 + L1MC4 LINE L1 6461 7931 -111 1678 182 54 99 chr2 20473359 20473487 -230214367 + MLT1C LTR MaLR 6 138 -329 1783 150 22 32 chr2 20473487 20473800 -230214054 - AluJb SINE Alu -2 310 1 1678 182 54 99 chr2 20473800 20474155 -230213699 + MLT1C LTR MaLR 138 467 0 295 135 14 94 chr2 20474170 20474265 -230213589 + L1MC4 LINE L1 7905 8041 -1 1035 129 20 0 chr2 20474341 20474488 -230213366 - AluSg SINE Alu -160 150 1 358 263 25 0 chr2 20474491 20474571 -230213283 - MER58B DNA MER1_type -259 82 1 411 186 17 8 chr2 20475100 20475218 -230212636 + (TA)n Simple_repeat Simple_repeat 1 119 0 4306 188 14 8 chr2 20475235 20476274 -230211580 - L1MB4 LINE L1 -18 6162 5111 333 0 0 0 chr2 20476987 20477024 -230210830 + (TG)n Simple_repeat Simple_repeat 1 37 0 365 256 194 8 chr2 20477824 20477953 -230209901 - MER5A DNA MER1_type -7 182 30 676 103 0 0 chr2 20478167 20478264 -230209590 + L1P LINE L1 2 98 -6048 * 1063 83 0 0 chr2 20478262 20478407 -230209447 + L1P LINE L1 623 767 -5379 * 28483 49 3 1 chr2 20478403 20482099 -230205755 - L1P LINE L1 -2442 3704 4 21 89 0 0 chr2 20482136 20482192 -230205662 + AT_rich Low_complexity Low_complexity 1 56 0 1964 144 3 31 chr2 20484567 20484991 -230202863 + L1MA1 LINE L1 5933 6345 0 314 243 10 29 chr2 20485210 20485304 -230202550 - MLT1I LTR MaLR 0 409 318 5879 168 217 26 chr2 20485304 20486749 -230201105 - MER52A LTR ERV1 0 1755 36 193 262 98 16 chr2 20487399 20487460 -230200394 + MIR SINE MIR 3 68 -194 2088 168 14 11 chr2 20487632 20487996 -230199858 + MLT1A1 LTR MaLR 1 365 0 219 297 16 0 chr2 20488943 20489007 -230198847 + (TAA)n Simple_repeat Simple_repeat 2 66 0 611 129 9 35 chr2 20489955 20490071 -230197783 - L1MB3 LINE L1 -10 6173 6061 303 357 119 16 chr2 20490077 20490396 -230197458 + L2 LINE L2 1837 2188 -1126 1825 129 63 33 chr2 20490894 20490948 -230196906 + THE1C LTR MaLR 1 52 -323 2095 117 63 26 chr2 20490948 20491299 -230196555 + THE1B LTR MaLR 1 364 0 1825 129 63 33 chr2 20491299 20491608 -230196246 + THE1C LTR MaLR 52 375 0 409 361 164 19 chr2 20492046 20492315 -230195539 + L2 LINE L2 2961 3268 -4 498 33 0 0 chr2 20492426 20492486 -230195368 + (TG)n Simple_repeat Simple_repeat 1 60 0 2474 143 30 7 chr2 20493482 20493910 -230193944 - L1PA16 LINE L1 0 6166 5729 2250 217 23 0 chr2 20493917 20494479 -230193375 + L1P LINE L1 4662 5236 -910 606 263 29 34 chr2 20494534 20494709 -230193145 + L2 LINE L2 2581 2754 -560 274 233 67 0 chr2 20494701 20494761 -230193093 - L2 LINE L2 0 3313 3250 * 245 314 41 8 chr2 20494848 20494969 -230192885 - L2 LINE L2 -276 3037 2913 476 157 231 0 chr2 20494971 20495092 -230192762 - L1MB7 LINE L1 -16 6168 6020 1419 144 0 26 chr2 20495092 20495213 -230192641 + L1MB8 LINE L1 5708 5831 -347 2442 34 41 0 chr2 20495213 20495506 -230192348 + AluY SINE Alu 1 305 -6 1419 144 0 26 chr2 20495506 20495648 -230192206 + L1MB8 LINE L1 5831 5964 -214 318 263 40 20 chr2 20695661 20695760 -229992094 - MLT1D LTR MaLR -168 337 237 320 182 0 0 chr2 20697250 20697305 -229990549 - MER112 DNA MER1_type -196 64 10 190 344 25 38 chr2 20701646 20701803 -229986051 + MIR3 SINE MIR 54 208 0 2198 122 0 0 chr2 20702130 20702425 -229985429 + AluSx SINE Alu 1 295 -17 1320 259 7 46 chr2 20703458 20703918 -229983936 + L2 LINE L2 2219 2660 -654 1111 167 5 56 chr2 20703924 20704140 -229983714 + MER20 DNA MER1_type 1 205 -14 1431 130 17 30 chr2 20704184 20704439 -229983415 - AluJo SINE Alu 0 312 68 440 331 65 24 chr2 20704439 20704949 -229982905 + L2 LINE L2 2699 3230 -83 2885 13 0 0 chr2 20705950 20706261 -229981593 + AluYa5 SINE Alu 1 311 0 184 162 27 0 chr2 20706267 20706310 -229981544 + MIR SINE MIR 98 142 -66 593 261 26 0 chr2 20707202 20707355 -229980499 + MIR SINE MIR 42 198 -64 2091 149 3 0 chr2 20708763 20709072 -229978782 + AluSx SINE Alu 1 310 -2 1238 243 168 29 chr2 20709318 20709729 -229978125 - MLT1H LTR MaLR -45 504 1 205 397 71 8 chr2 20711220 20711346 -229976508 - L2 LINE L2 -51 3221 3088 9324 33 0 0 chr2 20713164 20714249 -229973605 - L1P LINE L1 -1035 5111 4026 3382 34 5 5 chr2 20714249 20714657 -229973197 + L1PA5 LINE L1 5746 6153 -1 789 210 132 0 chr2 20714720 20714887 -229972967 + MER20 DNA MER1_type 1 189 -30 530 109 11 0 chr2 20715830 20715922 -229971932 + (TGGA)n Simple_repeat Simple_repeat 1 93 0 278 285 81 29 chr2 20718172 20718344 -229969510 + L2 LINE L2 2910 3090 -182 252 275 114 8 chr2 20718570 20718701 -229969153 + L1ME4a LINE L1 5782 5926 -195 430 226 20 20 chr2 20719014 20719116 -229968738 - MER96 DNA MER1_type? -11 164 63 262 236 31 39 chr2 20719587 20719714 -229968140 + L1 LINE L1 4733 4858 -1288 207 0 0 0 chr2 20719923 20719946 -229967908 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 324 0 0 0 chr2 20719945 20719981 -229967873 + (GA)n Simple_repeat Simple_repeat 2 37 0 1285 153 81 0 chr2 20719984 20720193 -229967661 - MLT1B LTR MaLR 0 390 165 2164 123 3 0 chr2 20720212 20720513 -229967341 + AluSc SINE Alu 8 309 0 3820 104 2 11 chr2 20720736 20721282 -229966572 + L1PA13 LINE L1 5612 6152 -11 620 309 64 14 chr2 20721288 20721570 -229966284 - L2 LINE L2 -528 2786 2491 883 290 107 0 chr2 20721603 20721913 -229965941 + L2 LINE L2 149 491 -2823 311 89 44 0 chr2 20723033 20723078 -229964776 - MADE1 DNA Mariner -2 78 32 1757 188 79 3 chr2 20723181 20723521 -229964333 - MLT2C2 LTR ERVL -98 366 1 2616 242 76 24 chr2 20723621 20725076 -229962778 + L1ME2 LINE L1 4622 6164 0 307 264 121 34 chr2 20725172 20725411 -229962443 + L1ME3A LINE L1 4561 4820 -1326 1794 246 128 19 chr2 20725729 20726261 -229961593 - MLT1G1 LTR MaLR -5 590 1 708 299 64 36 chr2 20726267 20727051 -229960803 + L1ME3A LINE L1 5153 5957 -213 359 318 27 0 chr2 20727407 20727517 -229960337 - MIR SINE MIR -63 145 33 374 229 40 25 chr2 20728438 20728590 -229959264 + MIR SINE MIR 42 193 -66 254 267 69 26 chr2 20729950 20730066 -229957788 - L2 LINE L2 -9 3263 3143 317 331 163 11 chr2 20730177 20730545 -229957309 - L2 LINE L2 -433 2881 2458 31 0 0 0 chr2 20731044 20731075 -229956779 + AT_rich Low_complexity Low_complexity 1 31 0 347 311 39 0 chr2 20731687 20731790 -229956064 + MER91C DNA MER1_type 1 107 -33 696 219 55 6 chr2 20732578 20732742 -229955112 + MER5A DNA MER1_type 18 189 0 546 76 22 11 chr2 20732805 20732897 -229954957 + MIR SINE MIR 104 196 -66 7468 133 25 44 chr2 20733193 20734460 -229953394 + THE1-int LTR MaLR 264 1505 -75 21 36 0 0 chr2 20736063 20736091 -229951763 + AT_rich Low_complexity Low_complexity 1 28 0 366 258 53 15 chr2 20736091 20736223 -229951631 - MIR SINE MIR -57 205 69 429 307 76 13 chr2 20736696 20736921 -229950933 + MIR SINE MIR 17 255 -7 2389 89 3 3 chr2 20736930 20737232 -229950622 - AluSg SINE Alu -8 302 1 257 277 71 9 chr2 20737563 20737675 -229950179 - MER112 DNA MER1_type -42 218 100 289 304 56 25 chr2 20737799 20737960 -229949894 - L2 LINE L2 -897 2417 2252 228 319 72 22 chr2 20738090 20738228 -229949626 - L2 LINE L2 -212 3060 2916 2241 99 3 48 chr2 20739146 20739459 -229948395 + AluSp SINE Alu 1 299 -14 1302 282 87 2 chr2 20739807 20740232 -229947622 - LTR40c LTR ERVL -4 461 1 216 143 0 0 chr2 20741197 20741239 -229946615 + (T)n Simple_repeat Simple_repeat 1 42 0 239 291 0 68 chr2 20741828 20741976 -229945878 + L2 LINE L2 2920 3057 -215 1475 40 0 0 chr2 20742847 20743020 -229944834 - AluY SINE Alu -2 309 137 211 311 0 0 chr2 20744410 20744471 -229943383 - MIR SINE MIR -65 143 83 417 328 119 42 chr2 20745091 20745451 -229942403 - L2 LINE L2 -52 3220 2833 2359 30 0 0 chr2 20747068 20747332 -229940522 + AluY SINE Alu 31 294 -17 239 190 127 13 chr2 20747591 20747670 -229940184 - MIR3 SINE MIR -15 193 106 254 307 52 33 chr2 20748833 20748986 -229938868 - L3 LINE CR1 -2 1575 1420 654 271 99 13 chr2 20749072 20749181 -229938673 + L1MD2 LINE L1 6019 6117 -242 378 0 0 0 chr2 20749181 20749223 -229938631 + (CA)n Simple_repeat Simple_repeat 2 43 0 654 271 99 13 chr2 20749223 20749415 -229938439 + L1MD2 LINE L1 6117 6346 -13 1086 224 8 8 chr2 20749422 20749659 -229938195 - MIR SINE MIR -3 259 23 277 274 27 0 chr2 20749819 20749892 -229937962 - MIR SINE MIR -70 192 118 630 144 0 42 chr2 20750738 20750856 -229936998 + MLT1A1 LTR MaLR 1 113 -252 458 311 128 32 chr2 20751089 20751308 -229936546 + MIR SINE MIR 17 256 -6 351 356 111 6 chr2 20751822 20752002 -229935852 + MIR SINE MIR 46 244 -18 213 324 62 41 chr2 20752263 20752408 -229935446 + MIR SINE MIR 60 207 -55 501 244 8 0 chr2 20752671 20752802 -229935052 - L1MD2 LINE L1 -19 6340 6209 304 341 118 14 chr2 20753037 20753257 -229934597 + L1MC4a LINE L1 5569 5811 -1997 1219 231 37 27 chr2 20753259 20753635 -229934219 + L1MA9 LINE L1 5896 6275 -37 269 252 107 0 chr2 20753657 20753760 -229934094 + L1MC4a LINE L1 5811 5924 -1884 421 251 150 43 chr2 20754101 20754308 -229933546 - MIR SINE MIR 0 262 34 2530 49 0 10 chr2 20755403 20755709 -229932145 - AluY SINE Alu -8 303 1 39 60 0 0 chr2 20756117 20756184 -229931670 + AT_rich Low_complexity Low_complexity 1 67 0 613 262 47 31 chr2 20756376 20756589 -229931265 + MLT1J2 LTR MaLR 192 473 -38 1191 254 86 26 chr2 20757905 20758544 -229929310 + L2 LINE L2 2631 3313 0 338 267 24 15 chr2 20759359 20759495 -229928359 - L1MC4 LINE L1 -1311 7011 1983 21 0 0 0 chr2 20759506 20759527 -229928327 + AT_rich Low_complexity Low_complexity 1 21 0 406 276 67 22 chr2 20759546 20759680 -229928174 - MIR3 SINE MIR -66 142 3 1881 245 103 45 chr2 20760552 20762078 -229925776 + L1MEc LINE L1 1281 2860 -3355 238 204 0 0 chr2 20763211 20763255 -229924599 + GA-rich Low_complexity Low_complexity 1 44 0 4027 156 33 4 chr2 20763345 20764109 -229923745 - L1MA4 LINE L1 -1 6299 5514 470 335 166 24 chr2 20764131 20764552 -229923302 + L2 LINE L2 2828 3308 -5 869 219 28 0 chr2 20764970 20765148 -229922706 + LTR40c LTR ERVL 44 226 -239 2493 221 37 44 chr2 20765154 20765710 -229922144 + MER45B DNA AcHobo 1 553 -487 2357 102 0 6 chr2 20765710 20766023 -229921831 - AluSq SINE Alu -2 311 1 2493 221 37 44 chr2 20766023 20766119 -229921735 + MER45B DNA AcHobo 553 648 -392 42222 38 0 2 chr2 20766125 20772316 -229915538 + L1PA3 LINE L1 1 6183 0 238 174 0 0 chr2 20772347 20772393 -229915461 + MER45B DNA AcHobo 647 692 -348 * 368 218 99 0 chr2 20772387 20772488 -229915366 + MER45B DNA AcHobo 930 1040 0 1023 243 4 9 chr2 20772499 20772725 -229915129 + LTR40b LTR ERVL 223 447 -15 2290 138 11 16 chr2 20773333 20773710 -229914144 + THE1C LTR MaLR 1 375 0 1297 136 5 0 chr2 20774638 20774858 -229912996 + L1MA6 LINE L1 6080 6300 0 478 262 9 0 chr2 20776099 20776206 -229911648 - MER81 DNA DNA -2 112 5 3006 258 36 25 chr2 20776889 20777040 -229910814 - L1M4 LINE L1 -2429 3717 3569 1885 175 7 0 chr2 20777040 20777348 -229910506 - AluSx SINE Alu -2 310 1 3006 258 36 25 chr2 20777348 20778461 -229909393 - L1M4 LINE L1 -2577 3569 2439 244 224 13 0 chr2 20778462 20778538 -229909316 + L1M4 LINE L1 2580 2656 -3490 360 296 83 28 chr2 20778589 20778805 -229909049 + L1ME3A LINE L1 5688 5915 -255 1829 258 55 20 chr2 20778973 20780043 -229907811 + L1MEc LINE L1 2041 3102 -3113 445 187 24 8 chr2 20780057 20780180 -229907674 + L1MEc LINE L1 3238 3362 -2853 199 261 138 0 chr2 20783746 20783811 -229904043 + L2 LINE L2 3182 3255 -58 243 236 18 0 chr2 20784194 20784249 -229903605 + (TA)n Simple_repeat Simple_repeat 2 57 0 216 0 0 0 chr2 20784618 20784642 -229903212 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 594 212 7 55 chr2 20786205 20786351 -229901503 + MLT1A2 LTR MaLR 236 374 0 180 423 0 0 chr2 20786592 20786689 -229901165 - L2 LINE L2 -8 3264 3168 292 288 189 7 chr2 20787746 20787899 -229899955 - MIR SINE MIR -2 260 80 897 257 70 80 chr2 20792746 20793220 -229894634 + L2 LINE L2 2827 3295 -18 349 309 83 31 chr2 20793461 20793918 -229893936 - L1M4 LINE L1 -1494 4652 4172 2130 92 0 3 chr2 20794798 20795109 -229892745 + AluY SINE Alu 1 310 0 886 211 11 5 chr2 20795289 20795474 -229892380 + MER5A DNA MER1_type 3 188 -1 454 189 154 0 chr2 20795851 20796020 -229891834 - MER20B DNA MER1_type -64 719 525 1721 264 12 0 chr2 20796071 20796492 -229891362 - MER20B DNA MER1_type -348 435 10 2205 151 70 7 chr2 20796614 20797017 -229890837 + MSTA LTR MaLR 1 428 0 1027 291 105 42 chr2 20798804 20799604 -229888250 - L1ME4a LINE L1 -2 6119 5270 191 265 0 0 chr2 20799660 20799709 -229888145 + L2 LINE L2 3265 3313 0 243 323 67 32 chr2 20800021 20800291 -229887563 - L1ME4a LINE L1 -1311 4835 4551 540 282 165 48 chr2 20801444 20801838 -229886016 - L2 LINE L2 -62 3251 2812 4595 183 0 24 chr2 20801872 20802308 -229885546 + L1P4 LINE L1 4433 4878 -1283 3870 28 2 0 chr2 20802308 20802768 -229885086 + L1PA4 LINE L1 5710 6180 0 4595 183 0 24 chr2 20802768 20803389 -229884465 + L1P4 LINE L1 4878 5464 -697 335 259 0 0 chr2 20803546 20803627 -229884227 - MER112 DNA MER1_type -177 83 3 224 220 0 102 chr2 20804705 20804764 -229883090 - MIR SINE MIR -117 145 93 702 175 6 11 chr2 20805624 20805736 -229882118 + (CA)n Simple_repeat Simple_repeat 1 113 -63 1938 199 15 0 chr2 20805736 20806077 -229881777 - MER7A DNA MER2_type 0 346 3 702 175 6 11 chr2 20806077 20806141 -229881713 + (CA)n Simple_repeat Simple_repeat 113 176 0 182 358 28 57 chr2 20807029 20807205 -229880649 + MIR SINE MIR 77 247 -15 182 215 62 92 chr2 20807844 20807909 -229879945 - MER5A DNA MER1_type -40 149 87 2216 128 0 10 chr2 20808098 20808411 -229879443 + AluSx SINE Alu 3 312 0 382 292 59 61 chr2 20809136 20809319 -229878535 + MIR3 SINE MIR 6 187 -59 201 349 0 0 chr2 20810394 20810460 -229877394 - L2 LINE L2 0 3313 3248 227 304 0 0 chr2 20811337 20811406 -229876448 + (CA)n Simple_repeat Simple_repeat 1 69 0 264 122 0 0 chr2 20812527 20812568 -229875286 + (CAT)n Simple_repeat Simple_repeat 3 43 0 2201 118 0 28 chr2 20814462 20814783 -229873071 - AluSx SINE Alu 0 312 1 357 296 15 61 chr2 20815633 20815765 -229872089 + MIR SINE MIR 20 145 -63 438 230 75 68 chr2 20816168 20816329 -229871525 - MER63A DNA MER1_type -37 173 12 335 342 32 21 chr2 20817979 20818166 -229869688 + MER5A DNA MER1_type 1 189 0 491 313 0 8 chr2 20819277 20819411 -229868443 - MIR3 SINE MIR -67 141 9 529 260 93 58 chr2 20819673 20819931 -229867923 - LTR16A LTR ERVL -165 285 19 1756 62 0 0 chr2 20820611 20820841 -229867013 + AluY SINE Alu 82 311 0 626 118 10 0 chr2 20821276 20821378 -229866476 + (GGAGA)n Simple_repeat Simple_repeat 1 103 0 21 0 0 0 chr2 20821627 20821648 -229866206 + AT_rich Low_complexity Low_complexity 1 21 0 21612 33 0 13 chr2 20822156 20825062 -229862792 + L1PA3 LINE L1 2918 5816 -339 1963 23 0 0 chr2 20825062 20825278 -229862576 + AluYb8 SINE Alu 100 315 -3 21612 33 0 13 chr2 20825278 20825612 -229862242 + L1PA3 LINE L1 5816 6153 -2 31 0 0 0 chr2 20825612 20825643 -229862211 + AT_rich Low_complexity Low_complexity 1 31 0 2426 122 125 10 chr2 20825742 20826126 -229861728 + MSTA LTR MaLR 1 428 0 256 253 32 118 chr2 20826300 20826486 -229861368 - L2 LINE L2 -218 3054 2885 219 278 40 116 chr2 20826700 20826873 -229860981 - L2 LINE L2 -1114 2200 2041 21 0 0 0 chr2 20826959 20826980 -229860874 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr2 20827051 20827093 -229860761 + AT_rich Low_complexity Low_complexity 1 42 0 407 337 112 6 chr2 20827360 20827538 -229860316 + LTR67 LTR ERVL 38 234 -323 365 98 0 0 chr2 20827938 20827989 -229859865 + Alu SINE Alu 1 51 -251 513 0 0 0 chr2 20827990 20828047 -229859807 + (TA)n Simple_repeat Simple_repeat 2 58 0 1084 327 95 42 chr2 20828646 20829643 -229858211 + ERVL LTR ERVL 881 1930 -3834 1308 97 0 0 chr2 20829887 20830052 -229857802 - AluSp SINE Alu -13 300 136 1250 339 83 24 chr2 20830053 20830835 -229857019 + ERVL LTR ERVL 2170 2997 -2657 251 329 12 0 chr2 20830845 20830930 -229856924 + ERVL LTR ERVL 3590 3675 -2089 2907 306 56 38 chr2 20831018 20832510 -229855344 + ERVL LTR ERVL 3906 5425 -339 180 0 0 0 chr2 20832949 20832969 -229854885 + (T)n Simple_repeat Simple_repeat 1 20 0 318 250 0 23 chr2 20833143 20833231 -229854623 + LTR67 LTR ERVL 458 543 -14 1585 274 89 2 chr2 20833234 20833704 -229854150 - LTR33 LTR ERVL -10 511 1 339 308 58 19 chr2 20834053 20834209 -229853645 + L2 LINE L2 2445 2606 -708 560 285 31 35 chr2 20834256 20834484 -229853370 + L2 LINE L2 3087 3313 0 388 200 24 12 chr2 20835127 20835211 -229852643 - MER44D DNA MER2_type -2 603 519 1209 165 5 0 chr2 20835211 20835399 -229852455 + MER2 DNA MER2_type 1 189 -156 30 59 0 0 chr2 20835462 20835513 -229852341 + AT_rich Low_complexity Low_complexity 1 51 0 1424 136 82 29 chr2 20835576 20835819 -229852035 - MER44D DNA MER2_type -83 526 1 1430 286 129 24 chr2 20837422 20838362 -229849492 - L2 LINE L2 -33 3280 2241 1049 215 33 0 chr2 20838572 20838786 -229849068 + AluJo SINE Alu 90 310 -2 25 65 0 0 chr2 20839010 20839056 -229848798 + AT_rich Low_complexity Low_complexity 1 46 0 217 367 100 0 chr2 20839431 20839521 -229848333 - L2 LINE L2 -11 3261 3163 1127 260 82 9 chr2 20839670 20839985 -229847869 - MLT-int LTR MaLR -894 841 504 1028 245 58 4 chr2 20839986 20840243 -229847611 + MST-int LTR MaLR 800 1070 -581 3375 142 110 0 chr2 20840244 20840842 -229847012 + LTR51 LTR ERV1 8 671 0 951 234 62 8 chr2 20840860 20841117 -229846737 + LTR56 LTR ERV1 175 445 0 923 200 6 6 chr2 20841139 20841314 -229846540 + MSTD-int LTR MaLR 1406 1580 -155 881 238 134 55 chr2 20841322 20841687 -229846167 + MSTD LTR MaLR 3 396 0 2859 151 64 58 chr2 20841688 20842297 -229845557 - L1MA9 LINE L1 -384 5928 5316 293 122 0 0 chr2 20842387 20842436 -229845418 - MER3 DNA MER1_type -19 190 142 4206 177 8 2 chr2 20842451 20843395 -229844459 + L1PB1 LINE L1 4488 5437 -714 3131 86 0 2 chr2 20843391 20843799 -229844055 + L1PB1 LINE L1 5672 6078 -73 * 385 237 58 32 chr2 20843799 20843955 -229843899 - MER3 DNA MER1_type -44 165 6 369 235 196 40 chr2 20843960 20844297 -229843557 + L1ME LINE L1 5259 5648 -514 675 265 105 32 chr2 20844358 20844701 -229843153 + L1ME3A LINE L1 4730 5097 -1049 537 250 73 28 chr2 20844735 20844983 -229842871 + L1MC4a LINE L1 987 1245 -4874 415 275 99 6 chr2 20845222 20845404 -229842450 + L1MC4 LINE L1 7720 7918 -124 350 185 12 0 chr2 20845404 20845485 -229842369 + (TA)n Simple_repeat Simple_repeat 1 82 0 290 206 186 0 chr2 20845529 20845626 -229842228 + L1MC4 LINE L1 7926 8040 -2 766 270 78 55 chr2 20845634 20846136 -229841718 + L1ME3A LINE L1 5434 5949 -213 484 325 52 16 chr2 20846303 20846731 -229841123 + L1MC4a LINE L1 3781 4235 -1894 306 294 102 53 chr2 20846735 20847184 -229840670 + L1MC4a LINE L1 5475 5945 -159 23 54 0 0 chr2 20847867 20847904 -229839950 + AT_rich Low_complexity Low_complexity 1 37 0 1019 243 78 28 chr2 20848227 20848614 -229839240 + L1MB7 LINE L1 5684 6089 -95 882 260 91 33 chr2 20848605 20848966 -229838888 + L1M4 LINE L1 3465 3846 -2300 * 344 300 35 117 chr2 20849477 20849880 -229837974 - L1M2 LINE L1 -5596 1253 884 2527 99 8 11 chr2 20849957 20850320 -229837534 + THE1B LTR MaLR 1 362 -2 326 257 267 0 chr2 20850470 20850571 -229837283 + MER52A LTR ERV1 46 173 -1582 * 5818 170 26 126 chr2 20850557 20852036 -229835818 + MER52A LTR ERV1 425 1755 0 2311 103 3 0 chr2 20852452 20852753 -229835101 + AluSp SINE Alu 1 302 -11 547 355 27 37 chr2 20852897 20853378 -229834476 + ERVL LTR ERVL 4728 5203 -561 282 333 119 6 chr2 20853830 20853989 -229833865 + LTR16C LTR ERVL 305 481 -10 402 229 166 36 chr2 20854018 20854241 -229833613 + L1ME3A LINE L1 5618 5869 -301 3640 202 71 11 chr2 20854824 20855166 -229832688 - L1MB7 LINE L1 0 6184 5864 7213 133 42 24 chr2 20855166 20855663 -229832191 - HSMAR2 DNA Mariner 0 1302 815 180 0 0 0 chr2 20855663 20855683 -229832171 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 7213 133 42 24 chr2 20855683 20856461 -229831393 - HSMAR2 DNA Mariner -487 815 4 3640 202 71 11 chr2 20856461 20857172 -229830682 - L1MB7 LINE L1 -320 5864 5073 188 75 0 50 chr2 20857419 20857459 -229830395 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 612 303 122 36 chr2 20857487 20858046 -229829808 + L1MEd LINE L1 501 1133 -4986 180 0 0 0 chr2 20858046 20858066 -229829788 + (TAA)n Simple_repeat Simple_repeat 3 22 0 612 303 122 36 chr2 20858066 20858203 -229829651 + L1MEd LINE L1 1133 1257 -4862 291 348 28 0 chr2 20858330 20858471 -229829383 + HAL1 LINE L1 1502 1646 -861 272 264 0 0 chr2 20858474 20858546 -229829308 + MLT2F LTR ERVL 2 73 -590 193 327 209 0 chr2 20858728 20858838 -229829016 + L2 LINE L2 3137 3269 -3 21 0 0 0 chr2 20859125 20859146 -229828708 + AT_rich Low_complexity Low_complexity 1 21 0 9152 130 15 6 chr2 20859252 20860723 -229827131 - L1PA10 LINE L1 -959 5187 3704 6338 81 9 19 chr2 20860727 20860920 -229826934 + L1PA10 LINE L1 5176 5369 -799 2281 63 0 70 chr2 20860920 20861236 -229826618 + AluY SINE Alu 5 298 -13 6338 81 9 19 chr2 20861236 20862041 -229825813 + L1PA10 LINE L1 5369 6165 -3 2388 67 0 7 chr2 20863210 20863507 -229824347 + AluSg SINE Alu 1 295 -15 1042 100 7 0 chr2 20863870 20864010 -229823844 + AluSq/x SINE Alu 3 143 -170 358 136 34 0 chr2 20864011 20864070 -229823784 + Alu SINE Alu 240 300 -1 312 118 52 46 chr2 20865543 20865696 -229822158 + (TA)n Simple_repeat Simple_repeat 1 154 0 953 250 45 16 chr2 20866016 20866260 -229821594 - MIR SINE MIR -8 254 4 186 335 37 31 chr2 20866260 20866389 -229821465 + L2 LINE L2 2225 2354 -960 682 213 11 44 chr2 20867037 20867220 -229820634 + MER5B DNA MER1_type 2 178 0 245 312 95 12 chr2 20867843 20867950 -229819904 + MIR SINE MIR 38 151 -85 474 252 0 0 chr2 20868441 20868544 -229819310 + MIR SINE MIR 157 259 -3 23 33 0 0 chr2 20868897 20868927 -229818927 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 20875723 20875753 -229812101 + AT_rich Low_complexity Low_complexity 1 30 0 1055 315 71 40 chr2 20877124 20877829 -229810025 + ERVL LTR ERVL 3459 4185 -1579 237 122 78 0 chr2 20877908 20878023 -229809831 + (TA)n Simple_repeat Simple_repeat 1 124 0 305 188 35 0 chr2 20878047 20878132 -229809722 + (TA)n Simple_repeat Simple_repeat 1 88 0 41 58 0 0 chr2 20878771 20878840 -229809014 + AT_rich Low_complexity Low_complexity 1 69 0 1226 175 72 7 chr2 20879064 20879370 -229808484 - MER33 DNA MER1_type -7 317 1 1029 220 0 40 chr2 20880057 20880280 -229807574 + MER20 DNA MER1_type 6 219 0 27 0 0 0 chr2 20880422 20880449 -229807405 + AT_rich Low_complexity Low_complexity 1 27 0 905 326 98 22 chr2 20880517 20880880 -229806974 + L2 LINE L2 2434 2876 -437 204 40 0 0 chr2 20880880 20880905 -229806949 + (CCA)n Simple_repeat Simple_repeat 1 25 0 905 326 98 22 chr2 20880905 20881136 -229806718 + L2 LINE L2 2876 3088 -225 4841 205 100 10 chr2 20881202 20882441 -229805413 - Charlie1a DNA MER1_type -1 1454 104 554 160 42 17 chr2 20882443 20882562 -229805292 + L1M4 LINE L1 4859 4980 -1166 302 176 0 0 chr2 20882564 20882615 -229805239 + Tigger5 DNA MER2_type 2 52 -2271 529 189 11 0 chr2 20882672 20882762 -229805092 - Tigger5 DNA MER2_type -2231 92 2 513 207 0 0 chr2 20882774 20882861 -229804993 + Tigger5 DNA MER2_type 2237 2323 0 1733 216 67 13 chr2 20882862 20882951 -229804903 + L1M4 LINE L1 4978 5061 -1117 2164 137 103 5 chr2 20882951 20883339 -229804515 + MSTC LTR MaLR 1 426 -2 1733 216 67 13 chr2 20883339 20884004 -229803850 + L1M4 LINE L1 5061 5778 -400 978 180 12 6 chr2 20884008 20884180 -229803674 + AluSc SINE Alu 121 293 -16 2510 61 0 0 chr2 20884501 20884796 -229803058 + AluY SINE Alu 1 295 -16 302 355 61 22 chr2 20884902 20885130 -229802724 + L1ME LINE L1 5426 5662 -459 2834 224 62 37 chr2 20885221 20886479 -229801375 + L1ME1 LINE L1 4547 5851 -315 2090 93 4 0 chr2 20886479 20886758 -229801096 + AluSp SINE Alu 23 302 -11 2834 224 62 37 chr2 20886758 20887077 -229800777 + L1ME1 LINE L1 5851 6161 -5 291 93 0 0 chr2 20887085 20887128 -229800726 + (CA)n Simple_repeat Simple_repeat 2 44 0 21 57 0 0 chr2 20887173 20887208 -229800646 + AT_rich Low_complexity Low_complexity 1 35 0 210 37 0 0 chr2 20887666 20887693 -229800161 + (CA)n Simple_repeat Simple_repeat 1 27 0 207 0 0 0 chr2 20888282 20888305 -229799549 + (CA)n Simple_repeat Simple_repeat 1 23 0 204 40 0 0 chr2 20888364 20888389 -229799465 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr2 20888625 20888646 -229799208 + (CA)n Simple_repeat Simple_repeat 1 21 0 565 256 23 6 chr2 20889645 20889817 -229798037 + L1MC4 LINE L1 7714 7888 -154 285 158 0 0 chr2 20889829 20889899 -229797955 + L1MC4 LINE L1 7927 7995 0 807 263 109 42 chr2 20890221 20891103 -229796751 - L1M4 LINE L1 -3005 3141 2201 566 167 0 0 chr2 20891546 20891654 -229796200 - L1MA4 LINE L1 -5 6295 6188 1921 139 8 27 chr2 20891656 20892057 -229795797 - L1MA4 LINE L1 -691 5609 5215 1756 194 10 25 chr2 20892051 20892448 -229795406 + L1MA4 LINE L1 4821 5211 -935 * 257 300 0 0 chr2 20892539 20892599 -229795255 + L2 LINE L2 2989 3048 -224 622 283 25 89 chr2 20892611 20892858 -229794996 + Charlie2 DNA MER1_type 2 220 -2562 2336 104 0 0 chr2 20892858 20893156 -229794698 + AluSx SINE Alu 1 298 -14 622 283 25 89 chr2 20893156 20893268 -229794586 + Charlie2 DNA MER1_type 220 338 -2444 219 36 0 0 chr2 20893321 20893349 -229794505 + (CAA)n Simple_repeat Simple_repeat 3 30 0 293 159 0 44 chr2 20893351 20893429 -229794425 + L1ME3A LINE L1 6092 6165 0 532 226 166 42 chr2 20893433 20893650 -229794204 + Charlie2a DNA MER1_type 1703 1946 -916 356 285 131 83 chr2 20894747 20895084 -229792770 + L1ME4a LINE L1 5480 5832 -289 333 0 0 0 chr2 20895345 20895382 -229792472 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 1564 136 19 87 chr2 20895523 20895833 -229792021 - AluJo SINE Alu -18 294 6 2117 121 3 3 chr2 20896054 20896359 -229791495 - AluSq SINE Alu -8 305 1 2278 69 0 4 chr2 20897477 20897754 -229790100 + AluSc SINE Alu 15 290 -19 941 295 84 14 chr2 20897947 20898377 -229789477 + LTR40c LTR ERVL 1 460 -5 327 366 143 7 chr2 20898417 20898690 -229789164 - L2 LINE L2 0 3272 2963 273 235 0 15 chr2 20898765 20898833 -229789021 - HsTC2 DNA Tc2 -1818 80 14 1126 253 50 13 chr2 20899399 20899700 -229788154 - MLT1H LTR MaLR -237 312 1 545 264 51 76 chr2 20899789 20900065 -229787789 + L2 LINE L2 3045 3313 0 22 0 0 0 chr2 20900081 20900103 -229787751 + AT_rich Low_complexity Low_complexity 1 22 0 344 304 76 67 chr2 20900159 20900517 -229787337 + MLT1H LTR MaLR 47 375 -34 2019 128 11 0 chr2 20900673 20900981 -229786873 + AluSq SINE Alu 1 311 0 470 260 91 69 chr2 20901061 20901523 -229786331 + L1M4 LINE L1 2651 3122 -3024 1944 282 78 11 chr2 20901531 20902629 -229785225 + L1ME1 LINE L1 35 1226 -5170 3801 231 58 100 chr2 20902631 20904914 -229782940 + L1ME1 LINE L1 1275 3652 -2563 2131 65 61 0 chr2 20904914 20905192 -229782662 + AluY SINE Alu 3 297 -14 3801 231 58 100 chr2 20905192 20906290 -229781564 + L1ME1 LINE L1 3652 4470 -1745 1905 136 35 0 chr2 20906290 20906576 -229781278 + AluSx SINE Alu 1 296 -16 3801 231 58 100 chr2 20906576 20906778 -229781076 + L1ME1 LINE L1 4470 4679 -1536 2079 104 13 7 chr2 20906784 20907083 -229780771 - AluSg SINE Alu -9 301 1 262 254 82 9 chr2 20907100 20907210 -229780644 + L1ME1 LINE L1 4768 4885 -1330 1732 206 5 29 chr2 20907219 20907603 -229780251 + L1ME1 LINE L1 5857 6231 -4 235 225 82 16 chr2 20907608 20907790 -229780064 + L1M4 LINE L1 3125 3318 -2828 211 147 0 0 chr2 20908811 20908845 -229779009 + L2 LINE L2 3265 3298 -15 403 207 129 26 chr2 20908855 20908971 -229778883 + L2 LINE L2 3183 3310 -3 416 303 55 21 chr2 20909732 20909877 -229777977 - MER5B DNA MER1_type 0 178 29 439 189 102 39 chr2 20909929 20909950 -229777904 - MER20 DNA MER1_type -1 218 200 2265 215 118 35 chr2 20909950 20910713 -229777141 + LTR1B LTR ERV1 1 826 0 439 189 102 39 chr2 20910713 20910818 -229777036 - MER20 DNA MER1_type -19 200 84 1897 73 16 0 chr2 20910821 20911066 -229776788 + HERV9 LTR ERV1 7872 8120 -279 * 2392 102 29 37 chr2 20911039 20911648 -229776206 + LTR12 LTR ERV1 348 714 0 357 205 26 13 chr2 20911652 20911730 -229776124 - MER20 DNA MER1_type -140 79 1 576 222 44 116 chr2 20911746 20911858 -229775996 + MER3 DNA MER1_type 1 91 -118 1618 187 13 32 chr2 20911858 20912174 -229775680 + AluJo SINE Alu 2 311 -1 576 222 44 116 chr2 20912174 20912286 -229775568 + MER3 DNA MER1_type 91 209 0 2983 159 30 14 chr2 20912637 20913209 -229774645 + L1MB8 LINE L1 5598 6178 0 232 259 12 157 chr2 20914369 20914535 -229773319 + L2 LINE L2 3039 3180 -92 36 53 0 0 chr2 20916096 20916153 -229771701 + AT_rich Low_complexity Low_complexity 1 57 0 364 144 41 41 chr2 20917029 20917126 -229770728 + MIR3 SINE MIR 112 208 0 2290 84 0 29 chr2 20917979 20918289 -229769565 + AluSg SINE Alu 6 306 -4 262 299 75 27 chr2 20918745 20918892 -229768962 - L3b LINE CR1 -146 1437 1284 324 345 21 27 chr2 20919002 20919168 -229768686 + MIR SINE MIR 42 209 -53 3252 149 107 5 chr2 20919252 20919520 -229768334 + L1MB3 LINE L1 5487 5726 -457 264 100 0 0 chr2 20919520 20919560 -229768294 + (CA)n Simple_repeat Simple_repeat 1 40 0 3252 149 107 5 chr2 20919560 20919917 -229767937 + L1MB3 LINE L1 5726 6176 -7 180 97 0 0 chr2 20920185 20920216 -229767638 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 346 273 148 22 chr2 20920699 20920882 -229766972 + MIR SINE MIR 7 212 -50 585 283 33 11 chr2 20920978 20921162 -229766692 - MIR SINE MIR -1 261 74 584 288 268 40 chr2 20922200 20923055 -229764799 + L1M4 LINE L1 2960 4009 -2137 2509 55 0 0 chr2 20923057 20923364 -229764490 + AluY SINE Alu 1 307 -4 456 266 101 14 chr2 20923533 20923719 -229764135 - MLT1J2 LTR MaLR -248 198 1 394 347 72 7 chr2 20924071 20924348 -229763506 + L1M4 LINE L1 5006 5300 -846 563 288 82 88 chr2 20924946 20925571 -229762283 + HAL1 LINE L1 827 1447 -1060 361 298 30 34 chr2 20925577 20925812 -229762042 + HAL1 LINE L1 1425 1658 -849 2474 71 0 3 chr2 20925830 20926141 -229761713 - AluY SINE Alu -1 310 1 330 274 74 51 chr2 20926493 20926668 -229761186 + L1MDa LINE L1 2350 2528 -4012 621 112 0 0 chr2 20926687 20926799 -229761055 + AluSg/x SINE Alu 195 306 0 735 309 134 31 chr2 20926930 20927513 -229760341 + L1MDa LINE L1 2706 3348 -3192 819 71 0 0 chr2 20928793 20928925 -229758929 - AluSp/q SINE Alu 0 319 188 254 289 145 0 chr2 20929070 20929153 -229758701 + MIR SINE MIR 20 114 -148 402 343 18 11 chr2 20929732 20929908 -229757946 - MIR SINE MIR -29 179 6 375 306 129 43 chr2 20929931 20930186 -229757668 + L1M4 LINE L1 4788 5064 -1082 320 244 217 0 chr2 20930736 20930851 -229757003 + MIR SINE MIR 113 252 -10 1131 207 61 105 chr2 20930857 20931248 -229756606 - MLT1A2 LTR MaLR 0 374 1 2109 212 45 25 chr2 20931248 20931719 -229756135 - MLT1A2-int LTR MaLR 0 1735 1256 2145 206 63 2 chr2 20932046 20932492 -229755362 - MLT1A2-int LTR MaLR -639 732 260 247 88 0 0 chr2 20932483 20932517 -229755337 - MLT1A2-int LTR MaLR -1620 115 82 * 6150 74 6 0 chr2 20932514 20933516 -229754338 - L1PA7 LINE L1 -597 5557 4552 4545 53 16 0 chr2 20933516 20934085 -229753769 + L1PA7 LINE L1 5569 6147 -7 680 190 26 0 chr2 20934111 20934227 -229753627 + AluJo SINE Alu 16 134 -178 524 146 10 68 chr2 20934251 20934354 -229753500 - MLT1A2-int LTR MaLR -1273 98 2 1642 176 26 57 chr2 20934355 20934741 -229753113 - MLT1A2 LTR MaLR 0 374 1 2666 216 53 3 chr2 20936043 20936690 -229751164 + L1M4 LINE L1 4286 4964 -1182 2571 246 31 12 chr2 20936703 20937383 -229750471 + L1MCb LINE L1 4 696 -5349 * 3599 232 147 28 chr2 20937379 20938570 -229749284 + L1M4 LINE L1 3671 5056 -1090 2072 138 3 0 chr2 20938570 20938868 -229748986 + AluSx SINE Alu 1 299 -13 3599 232 147 28 chr2 20938868 20939082 -229748772 + L1M4 LINE L1 5056 5243 -903 1976 159 65 15 chr2 20939103 20939505 -229748349 + L1MC3 LINE L1 7358 7779 -6 1860 198 39 8 chr2 20939508 20940126 -229747728 + L1M4 LINE L1 4945 5582 -596 1939 144 6 72 chr2 20940361 20940722 -229747132 + MER1B DNA MER1_type 1 337 0 211 278 56 67 chr2 20940996 20941086 -229746768 + L2 LINE L2 2996 3084 -188 58 15 0 0 chr2 20941257 20941322 -229746532 + AT_rich Low_complexity Low_complexity 1 65 0 195 42 0 0 chr2 20941458 20941482 -229746372 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 339 294 231 6 chr2 20941601 20941761 -229746093 + MIR3 SINE MIR 6 201 -7 542 245 216 5 chr2 20941850 20942054 -229745800 - MIR SINE MIR 0 262 16 2214 60 0 3 chr2 20943475 20943759 -229744095 + L1PA6 LINE L1 5865 6147 -7 703 259 41 25 chr2 20944219 20944462 -229743392 - MER112 DNA MER1_type -6 254 8 420 20 0 0 chr2 20945387 20945436 -229742418 + (A)n Simple_repeat Simple_repeat 1 49 0 2610 188 35 16 chr2 20947288 20947837 -229740017 - L1MB1 LINE L1 -2 6166 5608 1055 307 98 50 chr2 20948710 20949564 -229738290 - L2 LINE L2 -685 2629 1735 212 182 36 36 chr2 20949645 20949700 -229738154 - MIR SINE MIR -40 222 168 807 247 32 65 chr2 20949710 20949957 -229737897 - MIR SINE MIR 0 262 24 960 133 0 0 chr2 20950921 20951101 -229736753 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1125 170 78 92 chr2 20951357 20951667 -229736187 - AluJb SINE Alu 0 311 6 394 157 0 36 chr2 20952224 20952307 -229735547 + MER116 DNA Mariner 1 80 0 619 268 51 47 chr2 20952486 20952740 -229735114 - MIR SINE MIR -4 258 4 2433 180 20 9 chr2 20952764 20953220 -229734634 - MER65C LTR ERV1 0 461 1 831 251 54 17 chr2 20954879 20955118 -229732736 - MIR SINE MIR -1 261 14 2131 109 39 0 chr2 20955365 20955650 -229732204 + AluSp SINE Alu 1 296 -17 1071 232 25 4 chr2 20955890 20956170 -229731684 + L1M4 LINE L1 2528 2813 -3333 1497 177 123 24 chr2 20957052 20957391 -229730463 + MLT1A2 LTR MaLR 1 374 0 1465 161 17 0 chr2 20957391 20957625 -229730229 + MLT1B LTR MaLR 35 272 -118 2034 110 48 6 chr2 20957626 20957962 -229729892 + L1MA5A LINE L1 5944 6293 -4 2108 111 18 0 chr2 20958119 20958433 -229729421 + AluSq SINE Alu 1 319 0 732 167 0 0 chr2 20958460 20958574 -229729280 + MLT1B LTR MaLR 260 373 -17 341 141 14 0 chr2 20958747 20958818 -229729036 + GA-rich Low_complexity Low_complexity 1 72 0 277 377 9 0 chr2 20959845 20959959 -229727895 + MIR SINE MIR 24 138 -124 4369 178 26 16 chr2 20961058 20962137 -229725717 + L1MB8 LINE L1 4975 6074 -104 208 238 38 50 chr2 20962737 20962817 -229725037 + L3 LINE CR1 1498 1576 -1 2466 111 11 24 chr2 20962909 20963289 -229724565 + THE1C LTR MaLR 1 375 0 2242 117 0 7 chr2 20963314 20963621 -229724233 - AluSx SINE Alu -7 305 1 225 0 0 0 chr2 20963744 20963769 -229724085 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 209 305 49 24 chr2 20963771 20963853 -229724001 + MIR3 SINE MIR 104 187 -21 289 270 43 0 chr2 20964888 20965003 -229722851 - MIR3 SINE MIR -4 204 85 270 0 0 0 chr2 20965785 20965815 -229722039 + (TG)n Simple_repeat Simple_repeat 1 30 0 2091 105 0 7 chr2 20966898 20967174 -229720680 + AluSg SINE Alu 29 302 -8 217 87 22 22 chr2 20969196 20969242 -229718612 + (CTG)n Simple_repeat Simple_repeat 1 46 0 764 192 148 6 chr2 20971359 20971541 -229716313 - MER3 DNA MER1_type -1 208 1 2306 119 25 19 chr2 20972814 20973176 -229714678 - THE1B LTR MaLR 0 364 1 965 107 0 20 chr2 20973433 20973582 -229714272 - L1MA5A LINE L1 -2 6295 6150 587 295 77 49 chr2 20973721 20974300 -229713554 + L1ME4a LINE L1 5334 5933 -188 2248 120 3 0 chr2 20974486 20974795 -229713059 + AluSx SINE Alu 1 310 -2 186 214 48 107 chr2 20978789 20978873 -229708981 - MIR SINE MIR -81 181 103 183 310 35 11 chr2 20980403 20980490 -229707364 - L2 LINE L2 -248 3024 2936 273 271 58 58 chr2 20981002 20981190 -229706664 - L1MC4 LINE L1 -27 8015 7828 1402 154 9 4 chr2 20981250 20981477 -229706377 - AluJb SINE Alu 0 312 85 5032 167 10 9 chr2 20981514 20983043 -229704811 - L1PB4 LINE L1 0 6156 4624 281 87 0 22 chr2 20983596 20983642 -229704212 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 2154 143 0 6 chr2 20983642 20983956 -229703898 - AluSx SINE Alu 0 312 1 2511 62 0 7 chr2 20985511 20985817 -229702037 + AluY SINE Alu 1 304 -7 209 367 111 6 chr2 20985875 20986055 -229701799 + MIR SINE MIR 37 235 -27 316 322 49 44 chr2 20986560 20986576 -229701278 + MIR SINE MIR 20 34 -228 2191 122 0 7 chr2 20986576 20986871 -229700983 + AluSg SINE Alu 1 293 -17 316 322 49 44 chr2 20986871 20987059 -229700795 + MIR SINE MIR 34 225 -37 270 236 236 9 chr2 20987279 20987385 -229700469 + MER5A DNA MER1_type 55 184 -5 1858 133 36 23 chr2 20988480 20988788 -229699066 - AluSx SINE Alu 0 312 1 25 31 0 0 chr2 20988966 20988998 -229698856 + AT_rich Low_complexity Low_complexity 1 32 0 1753 162 0 39 chr2 20990856 20991165 -229696689 + AluJo SINE Alu 1 297 -15 649 328 131 25 chr2 20991198 20992279 -229695575 - L2 LINE L2 -73 3199 2014 249 296 134 20 chr2 20992546 20992793 -229695061 - L2 LINE L2 -1327 1987 1713 243 213 245 0 chr2 20992921 20993015 -229694839 + MIR SINE MIR 98 214 -48 201 237 17 34 chr2 20994217 20994276 -229693578 - L2 LINE L2 -8 3305 3248 1816 253 98 31 chr2 20994276 20995156 -229692698 - L2 LINE L2 -20 3293 2346 1017 286 97 3 chr2 20995523 20995883 -229691971 + L2 LINE L2 2890 3283 -30 2363 74 0 0 chr2 20996079 20996422 -229691432 - AluY SINE Alu 0 343 1 2388 99 0 0 chr2 20996824 20997117 -229690737 - AluSc SINE Alu -16 293 1 620 278 45 20 chr2 20997163 20997361 -229690493 - MIR SINE MIR -8 254 52 185 233 27 27 chr2 21000237 21000310 -229687544 - L2 LINE L2 -168 3104 3032 185 178 22 0 chr2 21009456 21009501 -229678353 + CT-rich Low_complexity Low_complexity 3 48 0 49 0 0 0 chr2 21011876 21011925 -229675929 + AT_rich Low_complexity Low_complexity 1 49 0 278 205 29 29 chr2 21011925 21012096 -229675758 + (TATAA)n Simple_repeat Simple_repeat 1 171 0 166 63 0 0 chr2 21012103 21012402 -229675452 + AT_rich Low_complexity Low_complexity 1 299 0 279 203 0 0 chr2 21013372 21013431 -229674423 + (TGGA)n Simple_repeat Simple_repeat 4 62 0 315 313 15 30 chr2 21013904 21014038 -229673816 + MIR SINE MIR 74 205 -57 203 247 62 49 chr2 21014158 21014239 -229673615 - L2 LINE L2 -18 3254 3173 2335 113 132 5 chr2 21014700 21015079 -229672775 - MSTA LTR MaLR 0 428 2 227 370 22 0 chr2 21017071 21017163 -229670691 + MIR SINE MIR 54 147 -115 180 308 0 19 chr2 21017216 21017268 -229670586 + MIR SINE MIR 158 208 -54 2244 110 3 3 chr2 21017461 21017770 -229670084 - AluSc SINE Alu 0 309 1 241 353 0 0 chr2 21018155 21018240 -229669614 - L2 LINE L2 -2 3311 3227 452 244 39 8 chr2 21018337 21018464 -229669390 + MIR SINE MIR 16 146 -116 340 244 110 31 chr2 21020303 21020430 -229667424 + MIR3 SINE MIR 6 142 -66 326 227 0 0 chr2 21020466 21020541 -229667313 + L2 LINE L2 3198 3272 0 605 279 42 9 chr2 21024231 21024446 -229663408 + MIR SINE MIR 20 241 -21 284 211 0 0 chr2 21025247 21025299 -229662555 - MIR SINE MIR -114 148 97 241 230 286 24 chr2 21025429 21025555 -229662299 - MIR SINE MIR -29 233 75 386 331 6 12 chr2 21026003 21026172 -229661682 + (CATA)n Simple_repeat Simple_repeat 2 169 0 183 42 0 0 chr2 21026902 21026926 -229660928 + (T)n Simple_repeat Simple_repeat 1 24 0 203 121 121 24 chr2 21027267 21027350 -229660504 + (TTCA)n Simple_repeat Simple_repeat 3 93 0 2304 84 7 0 chr2 21028067 21028364 -229659490 - AluY SINE Alu -12 299 1 609 247 56 0 chr2 21028680 21028842 -229659012 - MIR SINE MIR -74 188 18 23 0 0 0 chr2 21031417 21031440 -229656414 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 21033842 21033864 -229653990 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 21034683 21034705 -229653149 + (TG)n Simple_repeat Simple_repeat 2 23 0 219 315 125 51 chr2 21034916 21035132 -229652722 + L2 LINE L2 3004 3235 -37 2028 216 49 70 chr2 21036245 21036305 -229651549 - MLT2B1 LTR ERVL 0 520 460 1277 219 4 4 chr2 21036305 21036543 -229651311 + MER8 DNA MER2_type 2 239 0 2028 216 49 70 chr2 21036543 21037011 -229650843 - MLT2B1 LTR ERVL -60 460 3 242 362 9 17 chr2 21039677 21039793 -229648061 + L2 LINE L2 3153 3267 -5 312 290 21 0 chr2 21041293 21041386 -229646468 + GA-rich Low_complexity Low_complexity 2 96 0 232 318 217 23 chr2 21041457 21041674 -229646180 - L2 LINE L2 -467 2847 2589 181 346 0 48 chr2 21042280 21042384 -229645470 - L2 LINE L2 -2915 399 301 672 292 92 49 chr2 21043485 21043876 -229643978 + HERV16 LTR ERVL 2 409 -4587 1008 296 60 82 chr2 21043980 21044925 -229642929 + HERV16 LTR ERVL 1760 2684 -2312 7086 184 47 11 chr2 21044929 21046525 -229641329 - Charlie5 DNA MER1_type 0 2624 972 762 160 8 0 chr2 21046542 21046667 -229641187 - FLAM_A SINE Alu -16 126 1 3796 213 31 26 chr2 21046667 21047523 -229640331 - Charlie5 DNA MER1_type -41 121 130 2226 88 7 3 chr2 21047523 21047817 -229640037 - AluY SINE Alu -16 295 1 3796 213 31 26 chr2 21047817 21047976 -229639878 - Charlie5 DNA MER1_type -31 131 1 2750 345 64 32 chr2 21047977 21049586 -229638268 + HERV16 LTR ERVL 2748 4408 -1356 1786 164 3 3 chr2 21049911 21050204 -229637650 - AluSx SINE Alu -14 298 6 188 354 69 23 chr2 21051333 21051508 -229636346 + L3 LINE CR1 174 356 -1221 221 276 149 45 chr2 21053046 21053180 -229634674 - MER5A DNA MER1_type -24 165 18 669 222 17 45 chr2 21053201 21053377 -229634477 + MIR SINE MIR 56 226 -36 24 0 0 0 chr2 21055021 21055045 -229632809 + AT_rich Low_complexity Low_complexity 1 24 0 229 328 35 60 chr2 21055077 21055193 -229632661 - L2 LINE L2 -22 3250 3138 243 0 0 0 chr2 21055567 21055594 -229632260 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 194 250 0 21 chr2 21055701 21055749 -229632105 + L2 LINE L2 3264 3310 -3 240 333 81 21 chr2 21057109 21057295 -229630559 + MIR3 SINE MIR 3 199 -9 196 361 111 19 chr2 21057809 21058017 -229629837 + L2 LINE L2 2428 2654 -660 1633 305 64 35 chr2 21058553 21059781 -229628073 - L1M4 LINE L1 -2752 3394 2131 1630 167 0 22 chr2 21060032 21060301 -229627553 - AluJo SINE Alu -49 263 1 1957 167 42 11 chr2 21060567 21060679 -229627175 - L1MB7 LINE L1 -11 6173 6066 4148 38 0 2 chr2 21060679 21061149 -229626705 - L1PA5 LINE L1 0 6154 5686 1957 167 42 11 chr2 21061149 21061414 -229626440 - L1MB7 LINE L1 -118 6066 5784 206 213 0 21 chr2 21062985 21063032 -229624822 + L2 LINE L2 3266 3311 -2 228 254 18 0 chr2 21063323 21063378 -229624476 + L2 LINE L2 3217 3272 0 2440 70 7 0 chr2 21063414 21063713 -229624141 + AluSx SINE Alu 11 311 -1 292 292 0 22 chr2 21064192 21064281 -229623573 + MER5B DNA MER1_type 82 168 -10 383 231 30 75 chr2 21064329 21064463 -229623391 + MER5A DNA MER1_type 57 184 -5 373 236 300 29 chr2 21064469 21064609 -229623245 - MER5B DNA MER1_type 0 178 1 242 328 82 0 chr2 21064804 21064926 -229622928 + L1ME4a LINE L1 4037 4168 -1978 351 165 101 0 chr2 21064963 21065042 -229622812 - L1MB8 LINE L1 -1 6177 6091 412 317 52 24 chr2 21065123 21065273 -229622581 + L1ME4a LINE L1 4265 4409 -1737 1948 149 3 13 chr2 21065273 21065588 -229622266 - AluJb SINE Alu 0 312 1 412 317 52 24 chr2 21065588 21065860 -229621994 + L1ME4a LINE L1 4409 4699 -1447 673 285 33 50 chr2 21066312 21066673 -229621181 + L1ME4a LINE L1 5501 5855 -266 1886 179 44 11 chr2 21067389 21067825 -229620029 + MER89 LTR ERV1 1 550 -9 1054 219 47 78 chr2 21068324 21068707 -229619147 + MLT2D LTR ERVL 1 371 -43 229 233 26 43 chr2 21068709 21068825 -229619029 + (TA)n Simple_repeat Simple_repeat 2 115 0 213 65 0 0 chr2 21070122 21070153 -229617701 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 247 265 94 34 chr2 21070275 21070392 -229617462 - L2 LINE L2 -208 3064 2941 416 261 92 76 chr2 21071227 21071465 -229616389 - L2 LINE L2 -2 3311 3070 1059 200 128 11 chr2 21071521 21071580 -229616274 - L1MB7 LINE L1 -16 6168 6117 2455 78 0 0 chr2 21071580 21071876 -229615978 - AluY SINE Alu -15 296 1 1059 200 128 11 chr2 21071876 21072081 -229615773 - L1MB7 LINE L1 -67 6117 5873 956 110 158 0 chr2 21072084 21072248 -229615606 + MER30 DNA MER1_type 1 190 -40 44469 41 6 1 chr2 21072249 21078385 -229609469 + L1PA4 LINE L1 2 6165 0 228 245 0 0 chr2 21078385 21078434 -229609420 + MER30 DNA MER1_type 182 230 0 2070 202 20 5 chr2 21078472 21078912 -229608942 - L1MB7 LINE L1 -365 5819 5373 928 235 151 10 chr2 21078894 21079192 -229608662 - L1MB7 LINE L1 -1743 4403 4064 * 617 274 50 17 chr2 21079327 21079568 -229608286 - L2 LINE L2 -1069 2245 1997 726 235 93 99 chr2 21081218 21081724 -229606130 + LTR33 LTR ERVL 4 506 -15 216 0 0 0 chr2 21082394 21082418 -229605436 + (T)n Simple_repeat Simple_repeat 1 24 0 259 328 15 0 chr2 21083989 21084056 -229603798 + MLT2F LTR ERVL 186 253 -410 469 312 42 33 chr2 21084979 21085194 -229602660 - MIR SINE MIR -20 242 26 194 105 26 0 chr2 21085421 21085459 -229602395 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 820 250 25 33 chr2 21085480 21085978 -229601876 - MLT2F LTR ERVL -57 606 6 2709 7 0 0 chr2 21086232 21086523 -229601331 + AluY SINE Alu 21 311 0 252 0 0 0 chr2 21089479 21089507 -229598347 + (TG)n Simple_repeat Simple_repeat 1 28 0 42 48 0 0 chr2 21089635 21089698 -229598156 + AT_rich Low_complexity Low_complexity 1 63 0 23 33 0 0 chr2 21089922 21089952 -229597902 + AT_rich Low_complexity Low_complexity 1 30 0 2521 124 21 24 chr2 21090556 21090935 -229596919 + MER83B LTR ERV1 1 378 0 358 305 89 32 chr2 21092620 21092810 -229595044 + MIR3 SINE MIR 3 203 -5 223 226 119 83 chr2 21093232 21093316 -229594538 - L3 LINE CR1 -1 1576 1490 487 241 171 6 chr2 21093317 21093475 -229594379 + MER5A DNA MER1_type 4 187 -2 194 318 32 0 chr2 21093475 21093537 -229594317 - L3 LINE CR1 -77 1500 1437 319 228 50 40 chr2 21093621 21093722 -229594132 - MIR SINE MIR -10 252 151 503 301 87 6 chr2 21093727 21093900 -229593954 - MIR SINE MIR -71 191 5 438 314 251 23 chr2 21093902 21094341 -229593513 - L3 LINE CR1 -201 1376 838 657 281 63 48 chr2 21094494 21094825 -229593029 - L3 LINE CR1 -758 819 484 2061 263 67 18 chr2 21095002 21095614 -229592240 - MLT2F LTR ERVL -6 657 16 2745 271 60 31 chr2 21095614 21096605 -229591249 - ERVL-F LTR ERVL -40 5724 4705 2113 220 72 28 chr2 21096581 21096668 -229591186 + ERVL LTR ERVL 2306 2388 -3376 * 2591 58 0 6 chr2 21096668 21096979 -229590875 - AluY SINE Alu -2 309 1 2113 220 72 28 chr2 21096979 21097422 -229590432 + ERVL LTR ERVL 2388 2859 -2905 206 214 376 34 chr2 21097661 21097778 -229590076 + MIR SINE MIR 48 204 -58 205 337 27 38 chr2 21097857 21098019 -229589835 - MIR SINE MIR -72 136 2 21 0 0 0 chr2 21098332 21098353 -229589501 + AT_rich Low_complexity Low_complexity 1 21 0 557 207 9 182 chr2 21098802 21099131 -229588723 - TAR1 Satellite telomeric -1831 280 9 * 3621 129 7 24 chr2 21098925 21099131 -229588723 - LTR60 LTR ERV1 -1 585 377 1695 246 55 66 chr2 21099131 21099749 -229588105 - LTR9 LTR ERV1 0 612 2 3621 129 7 24 chr2 21099749 21100137 -229587717 - LTR60 LTR ERV1 -209 377 1 272 310 120 21 chr2 21100540 21100682 -229587172 - MIR SINE MIR -44 218 63 280 300 0 0 chr2 21101435 21101515 -229586339 + MER116 DNA Mariner 1 80 0 433 202 0 45 chr2 21101532 21101621 -229586233 + L2 LINE L2 3229 3313 0 1057 118 11 6 chr2 21102744 21102922 -229584932 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2064 124 0 0 chr2 21102925 21103208 -229584646 - AluSx SINE Alu -29 283 1 1554 291 59 12 chr2 21103596 21104090 -229583764 + MER69 DNA AcHobo 1 517 -709 1028 220 89 18 chr2 21104094 21104421 -229583433 + MER69 DNA AcHobo 2170 2519 -7 211 226 0 19 chr2 21104891 21104944 -229582910 + MIR SINE MIR 96 147 -115 440 214 12 23 chr2 21106101 21106361 -229581493 + CT-rich Low_complexity Low_complexity 1 257 0 210 245 113 0 chr2 21106403 21106456 -229581398 - L2 LINE L2 -35 3237 3179 558 0 0 0 chr2 21107097 21107159 -229580695 + (TA)n Simple_repeat Simple_repeat 1 62 0 418 287 61 49 chr2 21107220 21107384 -229580470 + MIR SINE MIR 15 180 -82 632 209 23 6 chr2 21107863 21108040 -229579814 + GA-rich Low_complexity Low_complexity 1 180 0 252 77 0 0 chr2 21108480 21108519 -229579335 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 604 254 136 40 chr2 21108892 21109120 -229578734 + MIR SINE MIR 13 262 0 223 404 22 7 chr2 21109285 21109421 -229578433 - L3 LINE CR1 -6 1571 1434 402 57 0 0 chr2 21110100 21110153 -229577701 + (CA)n Simple_repeat Simple_repeat 2 54 0 1969 122 0 4 chr2 21110173 21110452 -229577402 - AluSq SINE Alu 0 313 36 610 299 27 0 chr2 21110502 21110689 -229577165 - MIR SINE MIR -64 198 7 578 352 52 53 chr2 21111163 21111580 -229576274 + L2 LINE L2 2842 3255 -17 422 237 38 23 chr2 21112279 21112410 -229575444 + MER94 DNA DNA 1 133 -1 311 247 54 0 chr2 21112874 21112967 -229574887 + CT-rich Low_complexity Low_complexity 4 101 0 188 200 127 36 chr2 21114377 21114432 -229573422 - L2 LINE L2 -18 3254 3195 3035 68 11 0 chr2 21114434 21114785 -229573069 - THE1A LTR MaLR 0 355 1 10929 111 9 38 chr2 21114785 21116413 -229571441 - THE1A-int LTR MaLR 0 1580 1 2925 90 0 0 chr2 21116413 21116768 -229571086 - THE1A LTR MaLR 0 355 1 218 171 0 24 chr2 21116783 21116824 -229571030 - MER5B DNA MER1_type -17 161 122 4938 183 33 8 chr2 21116832 21118369 -229569485 + L1MB2 LINE L1 4564 6135 -36 183 246 49 16 chr2 21118441 21118502 -229569352 + MER5B DNA MER1_type 110 172 -6 246 206 109 33 chr2 21121835 21121927 -229565927 - MIR SINE MIR -80 182 84 2535 146 67 5 chr2 21122154 21122557 -229565297 + MSTA LTR MaLR 1 428 0 267 79 0 0 chr2 21123014 21123052 -229564802 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 315 339 186 17 chr2 21123731 21124021 -229563833 + L3 LINE CR1 893 1233 -340 2181 135 3 0 chr2 21124021 21124354 -229563500 + AluSp SINE Alu 1 313 0 5105 232 42 38 chr2 21125453 21126885 -229560969 + L1MC4 LINE L1 6469 7906 -136 211 331 81 24 chr2 21126958 21127082 -229560772 + MER5A DNA MER1_type 59 189 0 426 314 160 0 chr2 21127090 21127246 -229560608 - MER5A DNA MER1_type 0 189 9 464 349 26 15 chr2 21128126 21128390 -229559464 - L1ME LINE L1 -414 5756 5490 181 280 20 0 chr2 21128398 21128448 -229559406 + MIR SINE MIR 190 240 -22 212 307 67 13 chr2 21128509 21128584 -229559270 + L2 LINE L2 3235 3313 0 289 235 128 2 chr2 21128619 21128713 -229559141 - MIR SINE MIR -75 133 30 295 320 58 17 chr2 21129805 21129977 -229557877 + MIR3 SINE MIR 27 205 -3 1361 198 116 15 chr2 21130130 21130458 -229557396 - MLT1A1 LTR MaLR 0 365 5 206 338 101 14 chr2 21131267 21131415 -229556439 - L3 LINE CR1 -12 1565 1405 212 250 0 0 chr2 21131899 21131947 -229555907 + (CA)n Simple_repeat Simple_repeat 2 49 0 275 306 225 0 chr2 21132219 21132330 -229555524 + MIR3 SINE MIR 54 189 -19 290 317 177 18 chr2 21132602 21132766 -229555088 + MIR3 SINE MIR 18 207 -1 328 297 24 36 chr2 21132908 21133073 -229554781 + LTR16A LTR ERVL 26 188 -262 1395 284 23 34 chr2 21133168 21133608 -229554246 + ERVL LTR ERVL 889 1323 -3673 697 339 16 41 chr2 21133747 21134110 -229553744 + ERVL LTR ERVL 4751 5104 -660 731 274 64 34 chr2 21134528 21134859 -229552995 + LTR16A LTR ERVL 87 447 -3 187 179 0 0 chr2 21134921 21134960 -229552894 + L2 LINE L2 3273 3311 -2 942 279 0 0 chr2 21135274 21135489 -229552365 - MER58A DNA MER1_type -1 223 9 291 328 172 20 chr2 21135874 21136072 -229551782 - L2 LINE L2 -454 2860 2633 * 460 270 15 71 chr2 21136070 21136266 -229551588 + L2 LINE L2 3125 3309 -4 822 175 8 0 chr2 21136313 21136433 -229551421 - FLAM_A SINE Alu -12 121 1 273 313 12 12 chr2 21136654 21136734 -229551120 + MIR SINE MIR 19 98 -110 192 273 0 36 chr2 21136788 21136843 -229551011 + L2 LINE L2 3213 3265 -7 195 325 100 50 chr2 21137000 21137120 -229550734 - L2 LINE L2 -43 3229 3104 911 221 72 0 chr2 21137520 21137715 -229550139 - MER63A DNA MER1_type -1 209 1 442 192 42 50 chr2 21137845 21137965 -229549889 - MER103 DNA DNA -31 135 17 531 209 28 73 chr2 21137987 21138096 -229549758 - MER5A DNA MER1_type -79 99 4 212 372 35 9 chr2 21139347 21139460 -229548394 + L2 LINE L2 3071 3186 -86 2271 159 40 3 chr2 21139490 21139842 -229548012 + MLT1A1 LTR MaLR 1 365 0 247 369 39 0 chr2 21139875 21140005 -229547849 - MIR SINE MIR -47 215 81 719 285 56 86 chr2 21140993 21141653 -229546201 - L2 LINE L2 -549 2765 2126 188 340 75 0 chr2 21141980 21142074 -229545780 - L2 LINE L2 -10 3303 3203 25 0 0 0 chr2 21142116 21142141 -229545713 + AT_rich Low_complexity Low_complexity 1 25 0 259 317 71 60 chr2 21142211 21142625 -229545229 - L2 LINE L2 -208 3064 2633 186 118 0 0 chr2 21143116 21143150 -229544704 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 769 283 19 21 chr2 21144975 21145212 -229542642 + LTR16A LTR ERVL 84 313 -137 1806 203 28 60 chr2 21145504 21145938 -229541916 - MLT1D LTR MaLR -77 428 9 207 146 0 0 chr2 21146237 21146278 -229541576 + (TC)n Simple_repeat Simple_repeat 2 42 0 1593 201 17 0 chr2 21146387 21146685 -229541169 + L1MA4 LINE L1 5991 6293 -7 2192 196 0 12 chr2 21150262 21150307 -229537547 - MLT2C1 LTR ERVL 0 397 353 2390 186 41 7 chr2 21150307 21150726 -229537128 + Tigger2a DNA MER2_type 1 433 -1 2192 196 0 12 chr2 21150726 21151082 -229536772 - MLT2C1 LTR ERVL -44 353 1 266 304 111 73 chr2 21151103 21151419 -229536435 + L2 LINE L2 2944 3271 -42 2473 138 22 5 chr2 21151977 21152346 -229535508 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 21155366 21155388 -229532466 + AT_rich Low_complexity Low_complexity 1 22 0 522 278 92 12 chr2 21155416 21155589 -229532265 - MIR SINE MIR -56 206 20 248 351 9 0 chr2 21156156 21156267 -229531587 + G-rich Low_complexity Low_complexity 2 113 0 253 300 346 0 chr2 21156800 21156930 -229530924 - MER5A DNA MER1_type -14 175 1 1977 173 3 32 chr2 21158726 21159102 -229528752 + MLT1A1 LTR MaLR 1 365 0 264 302 91 104 chr2 21159353 21159804 -229528050 - L2 LINE L2 0 3272 2828 256 259 0 0 chr2 21160631 21160685 -229527169 + MIR3 SINE MIR 126 179 -29 247 246 0 0 chr2 21161060 21161117 -229526737 + GA-rich Low_complexity Low_complexity 2 58 0 577 164 0 9 chr2 21161595 21161705 -229526149 - MLT1D LTR MaLR -1 504 396 420 257 101 13 chr2 21161731 21161961 -229525893 + MER21B LTR ERV1 475 808 -123 719 134 24 8 chr2 21162354 21162481 -229525373 - MLT1D LTR MaLR -376 129 1 227 320 80 16 chr2 21162593 21162718 -229525136 + MIR3 SINE MIR 13 145 -63 304 232 14 0 chr2 21162756 21162825 -229525029 + L1ME4a LINE L1 1995 2064 -4362 205 288 0 0 chr2 21162827 21162886 -229524968 + (TA)n Simple_repeat Simple_repeat 2 60 0 649 244 61 50 chr2 21163021 21163201 -229524653 - MIR SINE MIR -73 189 8 181 330 154 0 chr2 21163634 21163725 -229524129 + MIR SINE MIR 48 152 -110 1880 154 44 44 chr2 21164973 21165363 -229522491 + MLT1B LTR MaLR 1 390 0 204 288 14 14 chr2 21165560 21165633 -229522221 + CT-rich Low_complexity Low_complexity 3 75 0 21 57 0 0 chr2 21166661 21166696 -229521158 + AT_rich Low_complexity Low_complexity 1 35 0 2119 141 0 0 chr2 21166945 21167277 -229520577 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 21167749 21167779 -229520075 + AT_rich Low_complexity Low_complexity 1 30 0 556 302 37 20 chr2 21168528 21168748 -229519106 + MIR SINE MIR 34 250 -12 2224 92 0 7 chr2 21169051 21169344 -229518510 - AluSp SINE Alu -22 291 1 488 295 89 35 chr2 21169452 21169884 -229517970 + L1ME4a LINE L1 2360 2777 -3649 2350 115 31 14 chr2 21170692 21171049 -229516805 + THE1B LTR MaLR 2 364 0 22 0 0 0 chr2 21171059 21171081 -229516773 + AT_rich Low_complexity Low_complexity 1 22 0 367 353 15 50 chr2 21171244 21171570 -229516284 + L1ME4a LINE L1 4855 5178 -1248 2419 119 19 11 chr2 21171668 21172038 -229515816 + THE1C LTR MaLR 1 373 -2 353 243 94 116 chr2 21172100 21172571 -229515283 + L1ME4a LINE L1 5911 6372 -29 2133 155 11 41 chr2 21172571 21173009 -229514845 - L1PB4 LINE L1 -2 6154 5730 353 243 94 116 chr2 21173009 21173039 -229514815 + L1ME4a LINE L1 6372 6401 0 275 204 133 0 chr2 21173325 21173438 -229514416 - L1MC4a LINE L1 -1911 5897 5770 337 306 111 41 chr2 21173518 21173830 -229514024 - L1MC4a LINE L1 -472 5649 5305 792 295 87 55 chr2 21174180 21174444 -229513410 - L1MC4a LINE L1 -1369 4777 4523 2541 110 3 18 chr2 21174444 21174825 -229513029 + THE1C LTR MaLR 1 375 0 792 295 87 55 chr2 21174825 21175344 -229512510 - L1MC4a LINE L1 -1623 4523 3969 2164 111 0 26 chr2 21175684 21175991 -229511863 - AluSg SINE Alu -11 299 1 366 325 41 38 chr2 21177394 21177597 -229510257 - MIR SINE MIR -53 155 1 329 188 102 7 chr2 21178716 21178864 -229508990 + L1MC4 LINE L1 7631 7901 -141 2786 145 75 9 chr2 21178903 21179447 -229508407 + L1MA4 LINE L1 5717 6296 -4 23 0 0 0 chr2 21179486 21179509 -229508345 + AT_rich Low_complexity Low_complexity 1 23 0 568 184 153 55 chr2 21179580 21179719 -229508135 + MER5A DNA MER1_type 9 168 -21 1397 197 51 46 chr2 21179719 21180089 -229507765 + MLT1A2 LTR MaLR 1 372 -2 568 184 153 55 chr2 21180089 21180112 -229507742 + MER5A DNA MER1_type 168 187 -2 180 306 82 12 chr2 21180206 21180291 -229507563 + L2 LINE L2 2879 2969 -303 316 310 23 0 chr2 21180805 21180892 -229506962 - MER5B DNA MER1_type 0 178 90 2184 70 0 4 chr2 21180905 21181175 -229506679 + AluY SINE Alu 40 308 -3 253 288 24 64 chr2 21181175 21181300 -229506554 - MER5B DNA MER1_type -54 124 5 210 350 81 12 chr2 21181668 21181828 -229506026 + L2 LINE L2 2065 2235 -1079 1278 233 158 2 chr2 21181828 21182232 -229505622 - MLT1C LTR MaLR 0 467 1 627 317 68 77 chr2 21182234 21183296 -229504558 + L2 LINE L2 2233 3270 -2 278 302 47 0 chr2 21183315 21183401 -229504453 + L2 LINE L2 3219 3308 -5 224 295 66 33 chr2 21183932 21184054 -229503800 - MIR SINE MIR -50 212 87 610 343 38 4 chr2 21184295 21184531 -229503323 - MIR SINE MIR -17 245 2 533 279 101 22 chr2 21187137 21187316 -229500538 + MIR SINE MIR 5 197 -65 299 315 93 9 chr2 21187536 21187644 -229500210 - L2 LINE L2 -14 3299 3183 23 0 0 0 chr2 21191077 21191100 -229496754 + AT_rich Low_complexity Low_complexity 1 23 0 268 400 9 0 chr2 21191237 21191347 -229496507 + L2 LINE L2 3158 3268 -4 189 0 0 0 chr2 21192173 21192194 -229495660 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 210 143 0 0 chr2 21192422 21192457 -229495397 + (T)n Simple_repeat Simple_repeat 1 35 0 195 42 0 0 chr2 21192949 21192973 -229494881 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 225 259 19 0 chr2 21192978 21193032 -229494822 + CT-rich Low_complexity Low_complexity 2 56 0 2365 252 61 18 chr2 21193034 21193645 -229494209 - L1ME2 LINE L1 -12 6947 6364 189 0 0 0 chr2 21193645 21193666 -229494188 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2365 252 61 18 chr2 21193666 21194456 -229493398 - L1ME2 LINE L1 -595 6364 5493 436 227 97 11 chr2 21194476 21194652 -229493202 - L1MC4a LINE L1 0 7808 7618 458 257 80 53 chr2 21194789 21195201 -229492653 - L1ME2 LINE L1 -4738 2384 1962 342 262 99 28 chr2 21195282 21195423 -229492431 - L1ME2 LINE L1 -5214 1908 1758 428 317 35 7 chr2 21195436 21195782 -229492072 - L1ME2 LINE L1 -4867 1555 1199 300 27 0 0 chr2 21196228 21196265 -229491589 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 2226 132 33 33 chr2 21197622 21198046 -229489808 - L1MA7 LINE L1 -4 6287 5864 245 294 88 69 chr2 21198538 21198698 -229489156 + MER5A DNA MER1_type 2 164 -25 875 218 6 35 chr2 21198738 21198908 -229488946 - MER5A DNA MER1_type -10 179 15 225 313 0 18 chr2 21199190 21199302 -229488552 + MARNA DNA Mariner 400 509 -77 842 209 0 23 chr2 21199349 21199526 -229488328 - MER97c DNA MER1_type? -915 175 3 183 200 0 0 chr2 21199621 21199656 -229488198 - L3b LINE CR1 -127 1456 1422 415 242 177 27 chr2 21200345 21200531 -229487323 - MLT1H LTR MaLR 0 549 336 808 249 9 24 chr2 21200587 21200800 -229487054 - MLT1H LTR MaLR -328 221 12 233 307 43 93 chr2 21200926 21201066 -229486788 - L2 LINE L2 -18 3254 3122 2172 113 0 0 chr2 21201153 21201444 -229486410 + AluSc SINE Alu 5 295 -14 401 354 28 11 chr2 21202359 21202537 -229485317 + MIR SINE MIR 2 182 -80 2994 133 24 43 chr2 21202553 21203133 -229484721 + LTR24B LTR ERV1 1 569 -7 245 191 0 0 chr2 21203137 21203179 -229484675 + MIR SINE MIR 210 251 -11 316 292 47 68 chr2 21204040 21204232 -229483622 - MER5A DNA MER1_type -1 188 1 2430 203 8 35 chr2 21204249 21204737 -229483117 - LTR42 LTR ERVL -18 477 3 234 0 0 0 chr2 21205644 21205670 -229482184 + (T)n Simple_repeat Simple_repeat 1 26 0 2199 120 0 0 chr2 21207266 21207558 -229480296 + AluSc SINE Alu 1 292 -17 304 298 0 0 chr2 21208597 21208681 -229479173 - MIR SINE MIR -84 178 95 22 56 0 0 chr2 21209259 21209295 -229478559 + AT_rich Low_complexity Low_complexity 1 36 0 669 287 19 3 chr2 21209301 21209622 -229478232 + L1MC/D LINE L1 4378 4703 -1443 1027 168 59 49 chr2 21209672 21209958 -229477896 - MER33 DNA MER1_type 0 324 36 711 284 65 64 chr2 21209980 21210679 -229477175 + L1MC/D LINE L1 4745 5447 -761 6789 65 38 9 chr2 21210679 21211860 -229475994 - L1PA8 LINE L1 -13 6159 4968 711 284 65 64 chr2 21211860 21212055 -229475799 + L1MC/D LINE L1 5447 5640 -568 894 142 0 0 chr2 21212183 21212310 -229475544 - AluSq/x SINE Alu -185 127 1 364 123 0 0 chr2 21212352 21212417 -229475437 - L1MB7 LINE L1 -8 6176 6112 2304 110 0 3 chr2 21212417 21212727 -229475127 + AluSx SINE Alu 1 309 -3 1795 180 13 124 chr2 21212772 21213060 -229474794 - LTR42 LTR ERVL -2 493 275 1467 97 65 5 chr2 21213060 21213277 -229474577 + MER30 DNA MER1_type 1 230 0 1795 180 13 124 chr2 21213277 21213454 -229474400 - LTR42 LTR ERVL -220 275 80 2533 209 39 37 chr2 21213495 21213691 -229474163 - L1MB7 LINE L1 -142 6042 5848 1633 173 7 17 chr2 21213691 21213992 -229473862 + AluJb SINE Alu 1 298 -14 2533 209 39 37 chr2 21213992 21214227 -229473627 - L1MB7 LINE L1 -336 5848 5615 2209 124 25 25 chr2 21214227 21214591 -229473263 - THE1B LTR MaLR 0 364 1 2533 209 39 37 chr2 21214591 21214829 -229473025 - L1MB7 LINE L1 -569 5615 5371 250 204 32 21 chr2 21214883 21214976 -229472878 + (TA)n Simple_repeat Simple_repeat 1 94 0 23 0 0 0 chr2 21215249 21215272 -229472582 + AT_rich Low_complexity Low_complexity 1 23 0 2279 147 12 20 chr2 21215393 21215801 -229472053 - MER65A LTR ERV1 -1 444 40 254 61 82 20 chr2 21215827 21215876 -229471978 - MER65B LTR ERV1 -477 54 3 223 376 47 0 chr2 21216369 21216454 -229471400 + L2 LINE L2 3141 3229 -43 186 275 143 11 chr2 21216492 21216583 -229471271 + L2 LINE L2 2566 2668 -646 245 358 57 24 chr2 21216609 21216732 -229471122 + L2 LINE L2 3141 3267 -5 308 279 72 90 chr2 21216874 21217096 -229470758 - MLT1I LTR MaLR -107 302 85 266 269 25 109 chr2 21217189 21217308 -229470546 - L2 LINE L2 -521 2793 2685 468 314 78 30 chr2 21217398 21217813 -229470041 + L1ME3A LINE L1 4805 5239 -907 2655 187 32 5 chr2 21217824 21218390 -229469464 + L1MB5 LINE L1 5583 6163 -11 1048 288 64 28 chr2 21218452 21219127 -229468727 + L1ME3A LINE L1 5237 5938 -232 423 146 65 24 chr2 21219135 21219258 -229468596 + L1MA9 LINE L1 6184 6311 -1 1497 210 144 87 chr2 21219633 21219857 -229467997 + MLT1E1 LTR MaLR 1 211 -443 2003 150 18 29 chr2 21219857 21220198 -229467656 + MER1B DNA MER1_type 1 337 0 1497 210 144 87 chr2 21220198 21220582 -229467272 + MLT1E1 LTR MaLR 211 644 -10 1516 175 25 39 chr2 21220677 21220962 -229466892 + AluJb SINE Alu 1 281 -31 317 256 73 0 chr2 21220964 21221046 -229466808 + L1MC4 LINE L1 6616 6703 -1339 198 0 0 0 chr2 21221508 21221530 -229466324 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 462 293 45 37 chr2 21221576 21221822 -229466032 - L1MEd LINE L1 -4892 1227 980 23 0 0 0 chr2 21222066 21222089 -229465765 + AT_rich Low_complexity Low_complexity 1 23 0 3761 121 27 0 chr2 21222473 21223059 -229464795 - LTR43 LTR ERV1 0 602 1 24 32 0 0 chr2 21223311 21223342 -229464512 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 21223435 21223470 -229464384 + AT_rich Low_complexity Low_complexity 1 35 0 15520 127 16 9 chr2 21223503 21224183 -229463671 - Tigger1 DNA MER2_type 0 2418 1744 2290 74 3 6 chr2 21224183 21224494 -229463360 - L1PA10 LINE L1 -6 6162 5853 15520 127 16 9 chr2 21224494 21226215 -229461639 - Tigger1 DNA MER2_type -674 1744 1 4150 134 9 76 chr2 21227693 21227888 -229459966 - L1MA9 LINE L1 -5 6307 6101 2640 55 0 0 chr2 21227888 21228199 -229459655 + AluY SINE Alu 1 311 0 4150 134 9 76 chr2 21228199 21228854 -229459000 - L1MA9 LINE L1 -211 6101 5514 1489 256 85 60 chr2 21228971 21229230 -229458624 - L1ME3A LINE L1 -78 6084 5833 7558 27 9 0 chr2 21229230 21230417 -229457437 - L1PA4 LINE L1 0 6155 4964 1489 256 85 60 chr2 21230417 21230957 -229456897 - L1ME3A LINE L1 -329 5833 5265 950 298 91 19 chr2 21231013 21231869 -229455985 - L1ME3A LINE L1 -955 5191 4274 328 273 87 40 chr2 21231882 21231987 -229455867 - L1ME3A LINE L1 -1922 4224 4108 1783 191 0 3 chr2 21231987 21232296 -229455558 + AluJb SINE Alu 1 308 -4 328 273 87 40 chr2 21232296 21232340 -229455514 - L1ME3A LINE L1 -2038 4108 4068 2096 162 0 20 chr2 21232380 21232725 -229455129 + MER7A DNA MER2_type 11 346 0 392 170 10 70 chr2 21232746 21232878 -229454976 - L1 LINE L1 -2165 3981 3856 6944 60 22 0 chr2 21233083 21234029 -229453825 - L1PA8 LINE L1 -4 6168 5219 315 214 14 0 chr2 21235283 21235353 -229452501 + L1ME1 LINE L1 4656 4726 -1420 1210 215 73 14 chr2 21235356 21236103 -229451751 + L1ME1 LINE L1 4791 5599 -567 1984 148 0 6 chr2 21236110 21236421 -229451433 + AluSx SINE Alu 1 309 -3 1395 195 0 28 chr2 21236428 21236710 -229451144 + AluJo SINE Alu 39 312 0 1478 239 33 32 chr2 21236714 21237183 -229450671 + L1ME1 LINE L1 5599 6021 -145 214 345 50 0 chr2 21237396 21237515 -229450339 + MIR SINE MIR 138 262 0 1980 153 10 61 chr2 21237618 21238029 -229449825 + MLT1B LTR MaLR 1 390 0 4368 56 0 5 chr2 21239355 21239906 -229447948 - L1PA7 LINE L1 0 6154 5607 1789 181 36 12 chr2 21242044 21242380 -229445474 + MSTB1 LTR MaLR 13 356 -76 22 0 0 0 chr2 21242449 21242471 -229445383 + AT_rich Low_complexity Low_complexity 1 22 0 1910 190 30 13 chr2 21242484 21242879 -229444975 + MER65A LTR ERV1 44 445 0 1703 230 18 53 chr2 21242902 21243677 -229444177 + MER65A-int LTR ERV1 29 942 -4050 2140 202 63 35 chr2 21244110 21244820 -229443034 + MER65A-int LTR ERV1 1096 1811 -3060 233 189 0 0 chr2 21244820 21244857 -229442997 - Alu SINE Alu -96 37 1 956 204 75 88 chr2 21244950 21245510 -229442344 + MER65A-int LTR ERV1 1720 3475 -3123 22 0 0 0 chr2 21245600 21245622 -229442232 + AT_rich Low_complexity Low_complexity 1 22 0 662 172 15 130 chr2 21245823 21246033 -229441821 + MER65A-int LTR ERV1 3499 3675 -2923 2209 96 10 7 chr2 21246033 21246199 -229441655 - AluSq SINE Alu -11 302 133 198 0 0 0 chr2 21246199 21246221 -229441633 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2209 96 10 7 chr2 21246221 21246355 -229441499 - AluSq SINE Alu -180 133 1 662 172 15 130 chr2 21246355 21246406 -229441448 + MER65A-int LTR ERV1 3675 3730 -2868 2079 209 78 84 chr2 21246482 21247810 -229440044 + MER65A-int LTR ERV1 3735 5094 -1237 2341 238 61 0 chr2 21247990 21248485 -229439369 + MER65A-int LTR ERV1 3604 4128 -743 1780 232 32 44 chr2 21248483 21249093 -229438761 + MER65A-int LTR ERV1 4231 4871 0 * 2267 147 34 27 chr2 21249093 21249535 -229438319 + MER65A LTR ERV1 1 445 0 316 317 6 82 chr2 21249964 21250147 -229437707 - L1 LINE L1 -1100 5046 4878 1289 274 73 52 chr2 21250211 21251602 -229436252 - L1 LINE L1 -1537 4609 3190 1684 189 3 16 chr2 21251657 21251964 -229435890 + AluJb SINE Alu 3 305 -7 1905 197 43 49 chr2 21252173 21252681 -229435173 - MLT1D LTR MaLR 0 505 1 314 315 114 22 chr2 21252972 21253215 -229434639 - L1MEd LINE L1 -868 1622 1334 281 226 65 21 chr2 21253283 21253376 -229434478 - L1MEd LINE L1 -4862 1257 1161 26 50 0 0 chr2 21253479 21253519 -229434335 + AT_rich Low_complexity Low_complexity 1 40 0 320 344 100 39 chr2 21253814 21254073 -229433781 - L1MEd LINE L1 -5571 548 274 2465 187 6 17 chr2 21254125 21254607 -229433247 + L1MB4 LINE L1 5656 6132 -48 28 0 0 0 chr2 21257284 21257312 -229430542 + AT_rich Low_complexity Low_complexity 1 28 0 41482 56 8 1 chr2 21257312 21263401 -229424453 - L1PA5 LINE L1 -8 6146 11 2165 100 7 7 chr2 21264083 21264383 -229423471 - AluSq SINE Alu -12 301 2 263 293 46 46 chr2 21264440 21264587 -229423267 - MIR SINE MIR -23 185 26 253 313 38 0 chr2 21264557 21264637 -229423217 - MIR SINE MIR -116 146 64 * 2844 227 35 29 chr2 21265046 21265893 -229421961 - L1ME1 LINE L1 -50 6376 5546 2906 239 93 15 chr2 21265972 21266908 -229420946 - L1ME1 LINE L1 -874 5532 4505 210 71 0 0 chr2 21266908 21266936 -229420918 + (TG)n Simple_repeat Simple_repeat 1 28 0 2906 239 93 15 chr2 21266936 21267045 -229420809 - L1ME1 LINE L1 -1901 4505 4406 237 213 25 25 chr2 21267045 21267167 -229420687 + CT-rich Low_complexity Low_complexity 3 124 0 272 167 44 56 chr2 21267203 21267293 -229420561 - L1M LINE L1 -752 5414 5329 681 221 22 31 chr2 21267307 21267472 -229420382 - L1ME1 LINE L1 -1976 4430 4266 198 0 0 0 chr2 21267472 21267494 -229420360 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 681 221 22 31 chr2 21267494 21267550 -229420304 - L1ME1 LINE L1 -2140 4266 4211 826 191 0 0 chr2 21267567 21267708 -229420146 - FRAM SINE Alu -36 140 1 3859 260 39 26 chr2 21267708 21269449 -229418405 - L1ME1 LINE L1 -2185 4221 2459 345 206 149 37 chr2 21269454 21269561 -229418293 - L1ME1 LINE L1 -5051 1358 1240 1234 295 66 43 chr2 21269588 21269751 -229418103 - L1M4c LINE L1 -4075 3063 2905 2218 81 0 14 chr2 21269751 21270055 -229417799 - AluY SINE Alu 0 300 1 1234 295 66 43 chr2 21270055 21270996 -229416858 - L1M4c LINE L1 -4233 2905 1987 1719 143 175 24 chr2 21270996 21271368 -229416486 + MSTA LTR MaLR 1 428 0 8430 153 25 42 chr2 21271370 21272976 -229414878 + MSTA-int LTR MaLR 3 1580 0 1535 176 213 0 chr2 21272976 21273149 -229414705 + MSTA LTR MaLR 1 136 -292 183 42 0 0 chr2 21273149 21273173 -229414681 + (TC)n Simple_repeat Simple_repeat 2 25 0 1535 176 213 0 chr2 21273173 21273352 -229414502 + MSTA LTR MaLR 136 428 0 1234 295 66 43 chr2 21273352 21273740 -229414114 - L1M4c LINE L1 -5150 1988 1390 1894 138 23 129 chr2 21273740 21274219 -229413635 - MSTA LTR MaLR 0 428 1 5743 192 30 14 chr2 21274219 21275262 -229412592 + L1 LINE L1 3359 4384 -1762 1951 162 13 0 chr2 21275262 21275565 -229412289 + AluSx SINE Alu 1 307 -5 5743 192 30 14 chr2 21275565 21275652 -229412202 + L1 LINE L1 4384 4468 -1678 195 42 0 0 chr2 21275652 21275676 -229412178 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 5743 192 30 14 chr2 21275676 21275794 -229412060 + L1 LINE L1 4468 4628 -1518 21 57 0 0 chr2 21275948 21275983 -229411871 + AT_rich Low_complexity Low_complexity 1 35 0 230 232 184 68 chr2 21276498 21276688 -229411166 - L1M4c LINE L1 -6256 599 388 1815 172 17 0 chr2 21277595 21277897 -229409957 - AluSx SINE Alu -1 311 5 431 331 57 0 chr2 21278713 21278837 -229409017 + L2 LINE L2 3142 3272 0 1473 205 13 13 chr2 21279129 21279432 -229408422 + AluJo SINE Alu 1 303 -9 236 274 167 0 chr2 21279592 21279676 -229408178 - L2 LINE L2 -2 3270 3173 348 64 0 0 chr2 21284027 21284074 -229403780 + (TG)n Simple_repeat Simple_repeat 2 48 0 216 182 0 0 chr2 21284074 21284118 -229403736 + (TA)n Simple_repeat Simple_repeat 2 45 0 329 311 36 51 chr2 21284224 21284423 -229403431 - MIR3 SINE MIR -50 158 18 907 304 51 27 chr2 21287386 21287722 -229400132 + L2 LINE L2 2952 3295 -18 342 0 0 0 chr2 21288473 21288511 -229399343 + (CA)n Simple_repeat Simple_repeat 2 39 0 703 183 84 0 chr2 21289839 21289981 -229397873 - MER105 DNA DNA -47 157 4 457 336 0 0 chr2 21289981 21290123 -229397731 + MLT1J1 LTR MaLR 11 152 -294 350 370 37 12 chr2 21290180 21290257 -229397597 + MLT1J2 LTR MaLR 244 318 -132 2256 130 19 30 chr2 21290257 21290625 -229397229 + THE1B LTR MaLR 1 364 0 350 370 37 12 chr2 21290625 21290709 -229397145 + MLT1J2 LTR MaLR 318 409 -41 462 288 21 78 chr2 21291174 21291305 -229396549 + MER5A DNA MER1_type 4 122 -67 2548 65 0 0 chr2 21291305 21291613 -229396241 - AluY SINE Alu -3 308 1 462 288 21 78 chr2 21291613 21291672 -229396182 + MER5A DNA MER1_type 122 183 -6 516 319 125 0 chr2 21292594 21292810 -229395044 + MIR SINE MIR 8 250 -12 470 189 100 0 chr2 21294310 21294400 -229393454 + MLT1E LTR MaLR 1 99 -494 848 198 12 12 chr2 21294405 21294572 -229393282 - FRAM SINE Alu -9 167 1 1218 216 25 85 chr2 21294668 21295033 -229392821 + MLT1E1 LTR MaLR 312 654 0 236 215 103 75 chr2 21295168 21295275 -229392579 - MIR SINE MIR -27 235 126 362 326 15 22 chr2 21295275 21295410 -229392444 - MIR SINE MIR -109 153 20 257 175 140 18 chr2 21295615 21295672 -229392182 - L2 LINE L2 -11 3302 3239 445 254 138 14 chr2 21296678 21296816 -229391038 - MER5A DNA MER1_type -3 186 32 2044 227 85 58 chr2 21297090 21298087 -229389767 - L1MC5 LINE L1 -44 7917 6894 191 61 30 0 chr2 21298106 21298139 -229389715 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 297 276 127 22 chr2 21298294 21298428 -229389426 - L2 LINE L2 -1023 2291 2144 233 317 48 29 chr2 21298680 21298784 -229389070 - MIR SINE MIR -155 107 2 3709 147 30 3 chr2 21299326 21299991 -229387863 + L1MA5A LINE L1 5615 6297 0 342 0 0 0 chr2 21300239 21300277 -229387577 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 480 306 27 7 chr2 21302611 21302758 -229385096 + MIR3 SINE MIR 54 203 -5 370 171 34 0 chr2 21303017 21303105 -229384749 + GA-rich Low_complexity Low_complexity 2 92 0 2038 75 32 0 chr2 21303153 21303431 -229384423 + L1PA8 LINE L1 5886 6172 0 186 191 0 0 chr2 21303668 21303710 -229384144 + CT-rich Low_complexity Low_complexity 3 44 0 290 219 27 41 chr2 21304515 21304588 -229383266 + MER112 DNA MER1_type 178 249 -11 240 286 76 76 chr2 21304795 21305005 -229382849 + MLT1K LTR MaLR 293 502 -86 6054 187 94 102 chr2 21305104 21307284 -229380570 - L1MCa LINE L1 -4241 2185 22 424 315 41 20 chr2 21307358 21307504 -229380350 - MIR SINE MIR -95 167 19 376 284 169 11 chr2 21308463 21308646 -229379208 + L2 LINE L2 3102 3313 0 538 92 0 0 chr2 21309024 21309100 -229378754 + AluSc SINE Alu 226 301 -8 1593 187 0 31 chr2 21312572 21312891 -229374963 - AluJo SINE Alu 0 310 1 2199 120 0 0 chr2 21313193 21313501 -229374353 + AluY SINE Alu 1 308 -3 888 275 13 8 chr2 21314766 21315002 -229372852 + MIR SINE MIR 1 237 -25 324 297 176 17 chr2 21315143 21315464 -229372390 + LTR33A LTR ERVL 292 523 0 279 79 0 0 chr2 21318438 21318476 -229369378 + (TTC)n Simple_repeat Simple_repeat 1 38 0 6531 77 16 8 chr2 21318476 21320164 -229367690 - L1PA7 LINE L1 -26 6128 4435 * 7213 99 4 30 chr2 21320149 21320754 -229367100 + L1P LINE L1 1672 2292 -3854 1583 117 0 0 chr2 21320754 21320967 -229366887 + AluSc SINE Alu 71 283 -26 7213 99 4 30 chr2 21320967 21320980 -229366874 + L1P LINE L1 2292 2304 -3842 188 35 35 0 chr2 21320980 21321009 -229366845 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 7213 99 4 30 chr2 21321009 21321513 -229366341 + L1P LINE L1 2304 2765 -3381 267 327 128 29 chr2 21321518 21321799 -229366055 - L2 LINE L2 -962 2352 2044 192 333 51 0 chr2 21321807 21321924 -229365930 - L2 LINE L2 -1508 1806 1684 293 293 140 57 chr2 21322247 21322476 -229365378 - L2 LINE L2 -42 3230 2983 503 255 28 28 chr2 21322609 21322754 -229365100 - MER58B DNA MER1_type -1 340 196 1688 222 59 61 chr2 21322756 21323382 -229364472 + MER92B LTR ERV1 1 625 -11 1041 183 59 0 chr2 21323403 21323589 -229364265 - MER58B DNA MER1_type -144 197 1 419 307 9 9 chr2 21323637 21323751 -229364103 - L2 LINE L2 -1 3312 3199 353 43 0 0 chr2 21323767 21323813 -229364041 + MADE1 DNA Mariner 35 80 0 371 360 25 5 chr2 21323978 21324178 -229363676 - MARNA DNA Mariner -100 486 283 1123 217 33 79 chr2 21324280 21324621 -229363233 + MLT1A2 LTR MaLR 1 323 -51 2246 89 0 7 chr2 21324621 21324914 -229362940 + AluY SINE Alu 1 291 -20 1123 217 33 79 chr2 21324914 21324964 -229362890 + MLT1A2 LTR MaLR 323 374 0 199 349 79 16 chr2 21325824 21325950 -229361904 - L2 LINE L2 -1 3271 3138 474 241 55 65 chr2 21326776 21326975 -229360879 - MIR3 SINE MIR -7 201 5 212 227 213 85 chr2 21327134 21327275 -229360579 + L2 LINE L2 3150 3308 -5 180 327 75 19 chr2 21327565 21327672 -229360182 - L2 LINE L2 0 3313 3201 410 277 76 113 chr2 21328841 21329195 -229358659 - L3 LINE CR1 -177 1400 1060 29 78 0 0 chr2 21331884 21331948 -229355906 + AT_rich Low_complexity Low_complexity 1 64 0 279 0 0 0 chr2 21332135 21332166 -229355688 + (CA)n Simple_repeat Simple_repeat 2 32 0 2382 114 39 3 chr2 21332166 21332525 -229355329 + THE1C LTR MaLR 2 373 -2 235 197 53 26 chr2 21332538 21332614 -229355240 - L1MC4 LINE L1 -1339 6703 6626 7067 114 11 7 chr2 21332641 21333328 -229354526 - L1PA8 LINE L1 -3 6169 5486 2324 84 3 3 chr2 21333328 21333625 -229354229 - AluY SINE Alu -14 297 1 7067 114 11 7 chr2 21333625 21334835 -229353019 - L1PA8 LINE L1 -686 5486 4278 213 244 0 0 chr2 21335219 21335260 -229352594 + L2 LINE L2 3219 3259 -13 287 358 29 7 chr2 21337277 21337414 -229350440 + L3 LINE CR1 651 790 -787 584 320 24 10 chr2 21337425 21337631 -229350223 - MIR SINE MIR -11 251 43 220 360 174 21 chr2 21337734 21337976 -229349878 + L3 LINE CR1 900 1178 -399 372 290 30 38 chr2 21338116 21338247 -229349607 - L2 LINE L2 -1 3271 3142 2071 169 6 0 chr2 21338285 21338629 -229349225 - MER7A DNA MER2_type -1 345 2 468 320 63 80 chr2 21338694 21339059 -229348795 + L3 LINE CR1 1204 1562 -15 185 281 31 31 chr2 21339575 21339639 -229348215 + MIR3 SINE MIR 97 160 -48 283 349 54 8 chr2 21339679 21339808 -229348046 - MER5B DNA MER1_type -37 141 7 269 297 0 0 chr2 21339803 21339867 -229347987 + MIR3 SINE MIR 145 208 0 * 252 0 0 0 chr2 21339896 21339924 -229347930 + (CA)n Simple_repeat Simple_repeat 2 29 0 243 0 0 0 chr2 21339930 21339957 -229347897 + (TG)n Simple_repeat Simple_repeat 2 28 0 1953 175 23 6 chr2 21341633 21342037 -229345817 - MLT2B1 LTR ERVL -64 456 1 295 281 167 9 chr2 21342208 21342322 -229345532 - MIR SINE MIR -82 180 49 961 287 113 29 chr2 21343886 21344371 -229343483 - MLT1H1 LTR MaLR 0 555 30 221 274 14 0 chr2 21345311 21345384 -229342470 + (TA)n Simple_repeat Simple_repeat 2 75 0 235 263 132 13 chr2 21345845 21345921 -229341933 + MIR SINE MIR 96 180 -82 804 189 77 12 chr2 21346912 21347165 -229340689 + MER33 DNA MER1_type 1 268 -56 20510 159 20 14 chr2 21347165 21354790 -229333064 - L1MA1 LINE L1 -19 7702 16 549 117 21 0 chr2 21354796 21354890 -229332964 + MER33 DNA MER1_type 217 312 -12 474 348 52 4 chr2 21355993 21356226 -229331628 + MIR SINE MIR 18 261 -1 922 271 105 56 chr2 21356276 21356686 -229331168 - LTR16A LTR ERVL 0 450 21 961 273 164 25 chr2 21357483 21358043 -229329811 - HAL1 LINE L1 -21 2486 1849 862 181 0 0 chr2 21358045 21358224 -229329630 - AluSc SINE Alu 0 313 135 739 240 20 15 chr2 21358299 21358495 -229329359 - HAL1 LINE L1 -739 1768 1572 382 311 89 26 chr2 21358496 21358766 -229329088 - HAL1 LINE L1 -2208 299 13 433 289 107 75 chr2 21358770 21359530 -229328324 - HAL1 LINE L1 -947 1560 777 264 306 0 0 chr2 21359598 21359660 -229328194 - HAL1 LINE L1 -1859 648 587 821 304 68 42 chr2 21359701 21360155 -229327699 - HAL1 LINE L1 -2029 478 13 346 335 83 53 chr2 21361096 21361312 -229326542 - L3 LINE CR1 -128 1449 1241 2902 87 16 3 chr2 21361312 21361678 -229326176 - THE1C LTR MaLR -3 372 2 346 335 83 53 chr2 21361678 21361929 -229325925 - L3 LINE CR1 -336 1241 968 4670 36 0 0 chr2 21362071 21362598 -229325256 - L1PA4 LINE L1 0 6155 5629 1254 56 6 0 chr2 21362598 21362760 -229325094 + L1P LINE L1 3830 3992 -2154 211 282 97 57 chr2 21363471 21363595 -229324259 - MIR SINE MIR -68 194 66 2239 105 23 0 chr2 21363618 21363956 -229323898 - AluSq SINE Alu 0 345 1 290 282 22 74 chr2 21365391 21365539 -229322315 - MIR3 SINE MIR -90 118 10 24 0 0 0 chr2 21365645 21365669 -229322185 + AT_rich Low_complexity Low_complexity 1 24 0 831 252 58 13 chr2 21366502 21366728 -229321126 - MIR SINE MIR -26 236 1 664 284 39 10 chr2 21368176 21368384 -229319470 - MIR SINE MIR -12 250 37 339 164 82 8 chr2 21368755 21368877 -229318977 + (TA)n Simple_repeat Simple_repeat 1 131 0 209 304 0 0 chr2 21369117 21369163 -229318691 + L2 LINE L2 3137 3182 -90 21 0 0 0 chr2 21370274 21370295 -229317559 + AT_rich Low_complexity Low_complexity 1 21 0 507 270 82 36 chr2 21370495 21370691 -229317163 - MIR3 SINE MIR -1 207 3 1148 229 13 4 chr2 21370966 21371193 -229316661 + MLT1A1 LTR MaLR 1 229 -136 187 355 36 18 chr2 21371467 21371577 -229316277 - L2 LINE L2 -222 3050 2939 1459 341 127 26 chr2 21372313 21373507 -229314347 + L2 LINE L2 1541 2855 -459 477 217 0 126 chr2 21373507 21373650 -229314204 + MER63 DNA MER1_type 3 753 -83 706 355 38 16 chr2 21373733 21374158 -229313696 + L2 LINE L2 2857 3290 -23 1146 276 86 46 chr2 21374694 21375172 -229312682 + LTR33 LTR ERVL 6 502 -19 211 238 88 62 chr2 21375410 21375490 -229312364 + L2 LINE L2 2532 2613 -701 2419 143 76 0 chr2 21375572 21375965 -229311889 - MSTA LTR MaLR 0 428 6 477 376 64 51 chr2 21376057 21376577 -229311277 + L2 LINE L2 2743 3267 -5 229 200 0 17 chr2 21376785 21376845 -229311009 - L1ME4a LINE L1 -103 6018 5960 2656 43 0 0 chr2 21377253 21377558 -229310296 + AluY SINE Alu 1 305 -6 245 143 0 20 chr2 21377641 21377690 -229310164 + (TG)n Simple_repeat Simple_repeat 1 48 0 216 0 0 0 chr2 21378761 21378785 -229309069 + (A)n Simple_repeat Simple_repeat 1 24 0 447 327 99 9 chr2 21379310 21379521 -229308333 + MIR SINE MIR 15 244 -18 944 222 72 19 chr2 21380248 21380455 -229307399 - MER20 DNA MER1_type 0 219 2 2131 119 3 3 chr2 21380926 21381220 -229306634 - AluSq SINE Alu -19 294 1 329 356 56 19 chr2 21383546 21383706 -229304148 + L2 LINE L2 3104 3269 -3 349 294 83 44 chr2 21385715 21385895 -229301959 + MIR3 SINE MIR 19 205 -3 233 307 34 23 chr2 21386170 21386258 -229301596 - L2 LINE L2 -45 3268 3180 191 383 0 25 chr2 21386525 21386606 -229301248 + MIR SINE MIR 19 97 -111 225 233 17 17 chr2 21388218 21388278 -229299576 + MIR3 SINE MIR 112 171 -37 209 291 37 52 chr2 21388375 21388509 -229299345 - L3b LINE CR1 -140 1443 1312 183 42 0 0 chr2 21389431 21389455 -229298399 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 21389890 21389918 -229297936 + AT_rich Low_complexity Low_complexity 1 28 0 368 261 22 22 chr2 21391514 21391606 -229296248 - MIR SINE MIR -100 108 17 183 313 102 39 chr2 21391730 21391858 -229295996 + MIR3 SINE MIR 11 146 -62 1337 150 0 33 chr2 21392276 21392489 -229295365 - AluJo SINE Alu -22 290 85 488 267 59 30 chr2 21392489 21392624 -229295230 - AluJ SINE Alu -62 250 112 695 215 0 0 chr2 21392624 21392745 -229295109 - AluJ SINE Alu -178 124 4 198 333 58 58 chr2 21393529 21393649 -229294205 + L2 LINE L2 3111 3230 -42 246 310 42 0 chr2 21394032 21394103 -229293751 + MIR SINE MIR 58 131 -131 225 0 0 0 chr2 21397709 21397734 -229290120 + (TC)n Simple_repeat Simple_repeat 2 26 0 1783 166 10 23 chr2 21397755 21398063 -229289791 + AluJb SINE Alu 3 306 -6 27 49 0 0 chr2 21398308 21398349 -229289505 + AT_rich Low_complexity Low_complexity 1 41 0 651 276 79 47 chr2 21398578 21398683 -229289171 - HAL1 LINE L1 -8 2499 2399 1852 201 174 42 chr2 21398683 21399236 -229288618 - MLT1E2 LTR MaLR 0 626 1 651 276 79 47 chr2 21399236 21399558 -229288296 - HAL1 LINE L1 -108 2399 2058 773 269 111 38 chr2 21399623 21399965 -229287889 - HAL1 LINE L1 -587 1920 1554 1230 210 105 68 chr2 21399966 21400420 -229287434 - HAL1 LINE L1 -1938 569 94 2472 170 34 12 chr2 21400420 21400837 -229287017 - MSTB LTR MaLR 0 426 1 1230 210 105 68 chr2 21400837 21400867 -229286987 - HAL1 LINE L1 -2413 94 67 1759 149 4 25 chr2 21401758 21402039 -229285815 + AluSx SINE Alu 1 275 -37 219 36 0 0 chr2 21402048 21402076 -229285778 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 540 352 40 0 chr2 21402508 21402707 -229285147 + MIR SINE MIR 48 254 -8 260 284 74 0 chr2 21403714 21403795 -229284059 + L2 LINE L2 2959 3045 -227 216 86 0 0 chr2 21404360 21404395 -229283459 + (A)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr2 21405037 21405067 -229282787 + AT_rich Low_complexity Low_complexity 1 30 0 186 375 106 47 chr2 21405458 21405778 -229282076 + L2 LINE L2 2890 3228 -44 635 273 53 49 chr2 21405932 21406196 -229281658 + MARNA DNA Mariner 159 423 -163 225 384 20 20 chr2 21406301 21406400 -229281454 + MIR SINE MIR 2 100 -162 379 269 7 57 chr2 21406584 21406706 -229281148 - MIR SINE MIR -118 144 28 2468 69 0 7 chr2 21406706 21407010 -229280844 - AluY SINE Alu -9 302 1 379 269 7 57 chr2 21407010 21407028 -229280826 - MIR SINE MIR -234 28 11 822 318 28 13 chr2 21407355 21407673 -229280181 + L3 LINE CR1 1254 1576 -1 266 253 72 12 chr2 21408027 21408110 -229279744 - MIR SINE MIR -66 196 109 491 215 76 38 chr2 21408697 21408855 -229278999 + L1ME3A LINE L1 5778 5941 -229 713 283 123 13 chr2 21409886 21410186 -229277668 + L2 LINE L2 2967 3299 -14 2007 301 44 11 chr2 21411246 21411888 -229275966 - MLT2F LTR ERVL 0 663 1 296 236 87 87 chr2 21411888 21412049 -229275805 - Ricksha DNA DNA -2900 346 186 1538 250 165 50 chr2 21412247 21412871 -229274983 + MER21B LTR ERV1 19 714 -149 356 0 23 0 chr2 21412889 21412933 -229274921 + (CA)n Simple_repeat Simple_repeat 2 46 0 1958 281 65 20 chr2 21413018 21413727 -229274127 - ERVL-F LTR ERVL -331 5433 4693 10325 195 73 21 chr2 21413759 21416913 -229270941 + L1MB3 LINE L1 20 3345 -3037 1913 64 0 26 chr2 21416934 21417200 -229270654 + L1PA13 LINE L1 5898 6156 -7 898 73 156 84 chr2 21417333 21417355 -229270499 + L1PA16 LINE L1 5975 5994 -172 186 43 0 0 chr2 21417355 21417378 -229270476 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 898 73 156 84 chr2 21417378 21417534 -229270320 + L1PA16 LINE L1 5994 6166 0 * 1774 229 71 4 chr2 21417531 21418068 -229269786 + L1MB3 LINE L1 3427 3999 -2383 283 291 27 0 chr2 21469075 21469185 -229218669 + (TA)n Simple_repeat Simple_repeat 2 114 0 5941 211 34 16 chr2 21469285 21471668 -229216186 + L1MB3 LINE L1 3994 6417 -2 795 271 84 16 chr2 21471682 21471933 -229215921 - ERVL-F LTR ERVL -1121 4643 4376 * 3038 243 34 3 chr2 21471924 21472598 -229215256 - ERVL-F LTR ERVL -2231 3533 2839 412 281 146 12 chr2 21472613 21472777 -229215077 - MIR SINE MIR -3 259 74 5029 291 45 11 chr2 21472893 21474694 -229213160 - ERVL-F LTR ERVL -2996 2768 853 1770 162 11 43 chr2 21474807 21475178 -229212676 - L1MB8 LINE L1 -200 5978 5620 275 285 114 32 chr2 21475194 21475352 -229212502 - MIR3 SINE MIR -37 171 1 537 321 146 36 chr2 21477766 21478333 -229209521 - L2 LINE L2 -191 3081 2455 2249 106 26 32 chr2 21478334 21478711 -229209143 + THE1C LTR MaLR 1 375 0 24 53 0 0 chr2 21478722 21478760 -229209094 + AT_rich Low_complexity Low_complexity 1 38 0 1935 116 7 27 chr2 21479257 21479575 -229208279 + AluSx SINE Alu 1 312 0 336 329 91 30 chr2 21480627 21480858 -229206996 - L3 LINE CR1 -673 904 660 232 179 80 86 chr2 21480863 21481014 -229206840 + MER113 DNA MER1_type? 4 153 -368 237 132 0 0 chr2 21482582 21482620 -229205234 + (TAG)n Simple_repeat Simple_repeat 1 38 0 305 250 79 0 chr2 21482815 21482891 -229204963 - MIR SINE MIR -70 192 111 234 315 130 12 chr2 21484825 21484986 -229202868 + MIR SINE MIR 60 238 -24 993 114 13 0 chr2 21486103 21486252 -229201602 - L1PA11 LINE L1 -11 6163 6013 1051 313 67 38 chr2 21486291 21486710 -229201144 + LTR16A LTR ERVL 23 446 -4 223 214 0 18 chr2 21487251 21487307 -229200547 + (TA)n Simple_repeat Simple_repeat 1 55 0 382 267 75 107 chr2 21487343 21487718 -229200136 + L1ME4a LINE L1 5602 5964 -157 245 279 0 0 chr2 21487720 21487788 -229200066 + (TA)n Simple_repeat Simple_repeat 1 68 0 338 231 51 0 chr2 21487794 21487872 -229199982 - L1MC4 LINE L1 -1347 6695 6614 333 311 0 0 chr2 21487808 21487898 -229199956 + L1MC4 LINE L1 6614 6703 -1339 * 311 301 0 0 chr2 21487912 21487995 -229199859 - L1MC4 LINE L1 -1346 6696 6614 183 80 0 0 chr2 21487995 21488020 -229199834 + (TA)n Simple_repeat Simple_repeat 1 25 0 283 216 104 40 chr2 21488020 21488145 -229199709 + L1ME4a LINE L1 5935 6067 -54 378 340 102 48 chr2 21488149 21488817 -229199037 + L2 LINE L2 961 1664 -1650 469 284 13 23 chr2 21489208 21489485 -229198369 - L1MC4 LINE L1 -339 5831 5644 1454 226 25 67 chr2 21489995 21490429 -229197425 + LTR52 LTR ERVL 6 421 0 23 0 0 0 chr2 21490620 21490643 -229197211 + AT_rich Low_complexity Low_complexity 1 23 0 1499 190 36 30 chr2 21490907 21491270 -229196584 + MLT1A1 LTR MaLR 1 365 0 1148 58 0 0 chr2 21491571 21491710 -229196144 - MER85 DNA T2_type 0 139 1 426 307 93 42 chr2 21492439 21492654 -229195200 + MIR SINE MIR 3 228 -34 1287 138 55 0 chr2 21494154 21494372 -229193482 + MER30 DNA MER1_type 1 230 0 1724 162 76 15 chr2 21494460 21494854 -229193000 + L1MB7 LINE L1 5743 6160 -24 525 292 0 0 chr2 21495874 21496011 -229191843 - MIR SINE MIR -45 217 81 253 344 131 55 chr2 21496812 21497233 -229190621 - L2 LINE L2 -431 2883 2431 199 326 114 38 chr2 21497940 21498009 -229189845 + L2 LINE L2 2392 2454 -860 2115 125 90 0 chr2 21498009 21498353 -229189501 - THE1C LTR MaLR 0 375 1 199 326 114 38 chr2 21498353 21498519 -229189335 + L2 LINE L2 2454 2645 -669 229 302 47 35 chr2 21498563 21498649 -229189205 - L2 LINE L2 -37 3276 3190 205 310 81 0 chr2 21499056 21499143 -229188711 - L2 LINE L2 -748 2566 2473 1563 178 20 10 chr2 21499619 21499917 -229187937 + MER2 DNA MER2_type 32 332 -13 27 0 0 0 chr2 21500287 21500314 -229187540 + AT_rich Low_complexity Low_complexity 1 27 0 263 347 76 31 chr2 21500331 21500622 -229187232 - L1MC/D LINE L1 -2001 5790 5487 464 336 67 34 chr2 21500977 21501471 -229186383 - L1MC/D LINE L1 -3387 2742 2233 251 296 6 62 chr2 21501569 21501731 -229186123 - L1MC/D LINE L1 -5005 1114 962 815 161 0 7 chr2 21502105 21502242 -229185612 - FRAM SINE Alu -10 166 31 204 277 0 21 chr2 21503145 21503192 -229184662 - MIR3 SINE MIR -20 188 143 885 317 35 0 chr2 21504231 21504515 -229183339 - LTR33 LTR ERVL -222 299 6 239 269 50 50 chr2 21504751 21504870 -229182984 - MIR SINE MIR -131 131 13 205 65 32 0 chr2 21505314 21505345 -229182509 + L2 LINE L2 1380 1411 -1903 192 250 0 21 chr2 21505447 21505495 -229182359 - L2 LINE L2 -8 3264 3218 225 305 29 29 chr2 21506549 21506654 -229181200 + MIR SINE MIR 75 179 -83 190 306 82 41 chr2 21507230 21507328 -229180526 + MIR SINE MIR 7 108 -154 696 306 119 25 chr2 21508392 21508752 -229179102 - LTR16C LTR ERVL 0 491 98 404 309 101 39 chr2 21509222 21509429 -229178425 + MIR SINE MIR 29 248 -14 234 0 0 0 chr2 21509441 21509467 -229178387 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1173 166 76 0 chr2 21509700 21509911 -229177943 - MER30 DNA MER1_type 0 230 4 206 289 52 31 chr2 21510440 21510537 -229177317 + MIR SINE MIR 1 99 -163 458 296 32 0 chr2 21510559 21510684 -229177170 + L2 LINE L2 3182 3310 -3 186 208 0 21 chr2 21510682 21510730 -229177124 + MIR SINE MIR 93 139 -69 * 325 318 32 0 chr2 21511341 21511467 -229176387 + MIR SINE MIR 120 249 -13 246 324 193 14 chr2 21512306 21512451 -229175403 - L2 LINE L2 -87 3185 3015 221 171 0 0 chr2 21513177 21513218 -229174636 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 188 194 0 0 chr2 21513473 21513504 -229174350 + L2 LINE L2 3265 3295 -18 415 269 81 27 chr2 21517534 21517683 -229170171 - L3 LINE CR1 -14 1563 1407 988 247 93 0 chr2 21520330 21520367 -229167487 - MER33 DNA MER1_type -2265 320 288 1165 126 10 20 chr2 21520367 21520565 -229167289 + L1PA14 LINE L1 5964 6159 -2 988 247 93 0 chr2 21520565 21520829 -229167025 - MER33 DNA MER1_type -2297 288 1 1959 143 18 47 chr2 21520845 21521231 -229166623 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr2 21522178 21522213 -229165641 + AT_rich Low_complexity Low_complexity 1 35 0 437 177 0 0 chr2 21522356 21522435 -229165419 - L1P LINE L1 -905 5241 5163 3059 82 58 16 chr2 21522435 21522886 -229164968 + L1PA10 LINE L1 5683 6152 -16 273 257 46 46 chr2 21523693 21523802 -229164052 + MER103 DNA DNA 1 109 -57 409 256 0 0 chr2 21524526 21524616 -229163238 + L3 LINE CR1 480 569 -1008 387 0 0 0 chr2 21524890 21524933 -229162921 + (TG)n Simple_repeat Simple_repeat 1 43 0 1285 246 62 10 chr2 21525286 21525672 -229162182 + L1ME LINE L1 5397 5802 -319 942 227 63 54 chr2 21525734 21526175 -229161679 + L1MC5 LINE L1 7502 7946 -15 208 237 85 76 chr2 21526994 21527112 -229160742 + MIR SINE MIR 105 223 -39 197 207 0 17 chr2 21527143 21527201 -229160653 + CT-rich Low_complexity Low_complexity 1 57 0 22 35 0 0 chr2 21527400 21527429 -229160425 + AT_rich Low_complexity Low_complexity 1 29 0 210 37 0 0 chr2 21529581 21529608 -229158246 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1917 130 14 4 chr2 21529622 21529899 -229157955 - AluSx SINE Alu -30 282 3 4535 190 30 1 chr2 21530118 21531214 -229156640 - L1P4 LINE L1 -684 5482 4356 923 206 0 0 chr2 21531213 21531388 -229156466 - L1P4 LINE L1 -2341 3805 3631 * 329 310 173 28 chr2 21531945 21532229 -229155625 - MLT1H LTR MaLR -16 533 209 305 232 61 12 chr2 21532276 21532358 -229155496 + L1 LINE L1 3072 3157 -2989 1863 155 13 7 chr2 21532425 21532729 -229155125 - AluJb SINE Alu -6 306 1 1323 188 25 43 chr2 21533648 21533883 -229153971 + AluJo SINE Alu 29 260 -52 3515 117 31 13 chr2 21533883 21534438 -229153416 - MER61E LTR ERV1 -4 565 1 1323 188 25 43 chr2 21534438 21534484 -229153370 + AluJo SINE Alu 260 305 -7 317 239 35 26 chr2 21535001 21535114 -229152740 - MLT1H-int LTR MaLR -1269 102 2 421 240 100 60 chr2 21535117 21535448 -229152406 - MLT1H LTR MaLR -2 550 108 476 207 95 0 chr2 21535851 21535967 -229151887 - MER94 DNA DNA -2 132 6 255 271 0 14 chr2 21535977 21536047 -229151807 + HAL1b LINE L1 392 460 -888 3084 124 50 2 chr2 21536131 21536613 -229151241 - MER84 LTR ERV1 0 507 3 4021 120 14 14 chr2 21537065 21537699 -229150155 + MER41B LTR ERV1 2 635 0 277 280 141 49 chr2 21538000 21538772 -229149082 + L1 LINE L1 2205 3047 -3099 23 0 0 0 chr2 21540225 21540248 -229147606 + AT_rich Low_complexity Low_complexity 1 23 0 25 83 0 0 chr2 21540274 21540334 -229147520 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr2 21540665 21540687 -229147167 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 21542498 21542519 -229145335 + AT_rich Low_complexity Low_complexity 1 21 0 1772 162 6 19 chr2 21542930 21543245 -229144609 + AluJb SINE Alu 1 311 -1 1659 156 27 21 chr2 21543877 21544252 -229143602 + MER1B DNA MER1_type 1 337 -2 646 152 0 0 chr2 21544462 21544567 -229143287 - L1MA10 LINE L1 -25 6309 6205 1536 152 116 27 chr2 21544690 21545025 -229142829 - MLT1A1 LTR MaLR 0 365 1 396 279 54 0 chr2 21545025 21545172 -229142682 - L1M4 LINE L1 -2489 3657 3503 21 36 0 0 chr2 21546735 21546763 -229141091 + AT_rich Low_complexity Low_complexity 1 28 0 340 303 11 110 chr2 21547977 21548241 -229139613 - L1M4 LINE L1 -2296 3850 3613 200 322 0 0 chr2 21548686 21548773 -229139081 + T-rich Low_complexity Low_complexity 1 87 0 21 0 0 0 chr2 21549067 21549088 -229138766 + AT_rich Low_complexity Low_complexity 1 21 0 14088 156 24 7 chr2 21549102 21549882 -229137972 - Tigger1 DNA MER2_type 0 2418 1653 2840 189 136 42 chr2 21549882 21550637 -229137217 - LTR1B LTR ERV1 0 826 1 14088 156 24 7 chr2 21550637 21552234 -229135620 - Tigger1 DNA MER2_type -765 1653 1 531 348 81 45 chr2 21552333 21552524 -229135330 - HAL1 LINE L1 -904 1603 1420 2179 123 0 0 chr2 21552524 21552817 -229135037 + AluSx SINE Alu 3 295 -17 531 348 81 45 chr2 21552817 21553116 -229134738 - HAL1 LINE L1 -1087 1420 1086 3105 184 40 17 chr2 21553116 21553810 -229134044 - MER67C LTR ERV1 0 710 1 531 348 81 45 chr2 21553810 21553902 -229133952 - HAL1 LINE L1 -1421 1086 999 267 306 44 39 chr2 21554469 21554649 -229133205 + MLT1L LTR MaLR 98 278 -337 305 340 66 23 chr2 21556110 21556366 -229131488 - MLT1J1 LTR MaLR -4 442 176 367 179 83 12 chr2 21556490 21556574 -229131280 - MLT1J2 LTR MaLR -360 90 1 250 322 41 85 chr2 21557222 21557492 -229130362 + MIR SINE MIR 5 262 0 204 306 97 28 chr2 21557792 21557864 -229129990 - L2 LINE L2 -38 3234 3158 652 323 132 40 chr2 21560455 21561052 -229126802 - L3 LINE CR1 -396 1181 530 1148 161 256 25 chr2 21562726 21563000 -229124854 - MER1B DNA MER1_type 0 337 1 418 290 29 104 chr2 21563772 21564158 -229123696 - L1M4 LINE L1 -3002 3144 2788 804 262 78 38 chr2 21564811 21565208 -229122646 - L1ME3 LINE L1 -80 6082 5670 1442 211 32 7 chr2 21566534 21566690 -229121164 - AluJo SINE Alu -20 292 124 225 0 0 0 chr2 21566690 21566715 -229121139 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1442 211 32 7 chr2 21566715 21566843 -229121011 - AluJo SINE Alu -188 124 1 1544 265 25 29 chr2 21568729 21569246 -229118608 + MLT2F LTR ERVL 147 661 -2 412 149 81 0 chr2 21569410 21569484 -229118370 + MIR SINE MIR 183 262 0 633 281 101 46 chr2 21569495 21569823 -229118031 + L3 LINE CR1 946 1291 -286 372 306 38 50 chr2 21572258 21572418 -229115436 + MIR SINE MIR 26 183 -79 959 291 96 49 chr2 21572588 21573221 -229114633 + HAL1 LINE L1 381 1043 -1464 238 190 63 25 chr2 21573599 21573678 -229114176 + L1MC4 LINE L1 6620 6701 -1341 310 286 43 25 chr2 21573917 21574118 -229113736 + L1MC/D LINE L1 5428 5634 -528 185 224 10 31 chr2 21575577 21575601 -229112253 + (TA)n Simple_repeat Simple_repeat 1 24 -72 13372 136 39 16 chr2 21575601 21577957 -229109897 - Tigger1 DNA MER2_type -4 2414 5 185 224 10 31 chr2 21577957 21578030 -229109824 + (TA)n Simple_repeat Simple_repeat 24 96 0 3624 70 12 2 chr2 21578115 21578604 -229109250 + LTR3b LTR ERVK 3 496 -4 283 160 29 14 chr2 21579365 21579509 -229108345 + CT-rich Low_complexity Low_complexity 1 146 0 307 237 97 0 chr2 21579573 21579666 -229108188 - MER91C DNA MER1_type -1 139 38 208 356 14 0 chr2 21579862 21579935 -229107919 - MIR3 SINE MIR -13 195 122 475 321 46 28 chr2 21583019 21583237 -229104617 - MIR SINE MIR -35 227 6 205 370 17 34 chr2 21583292 21583411 -229104443 + L2 LINE L2 2967 3083 -189 218 218 18 18 chr2 21584915 21584970 -229102884 + GA-rich Low_complexity Low_complexity 2 56 0 292 355 30 18 chr2 21585035 21585201 -229102653 + MIR SINE MIR 19 186 -76 22 56 0 0 chr2 21585516 21585552 -229102302 + AT_rich Low_complexity Low_complexity 1 36 0 444 268 102 17 chr2 21586087 21586322 -229101532 - MLT1L LTR MaLR -349 266 12 1322 216 10 80 chr2 21586839 21587238 -229100616 + MLT1A2 LTR MaLR 4 374 0 512 161 9 45 chr2 21588160 21588272 -229099582 - L1MC1 LINE L1 -119 6214 6107 1382 198 80 0 chr2 21588276 21588428 -229099426 - AluJo SINE Alu -28 284 146 180 0 0 0 chr2 21588428 21588448 -229099406 + (TG)n Simple_repeat Simple_repeat 1 20 0 1382 198 80 0 chr2 21588448 21588558 -229099296 - AluJo SINE Alu -166 146 1 502 162 9 72 chr2 21588793 21588904 -229098950 + MER63 DNA MER1_type 678 781 -280 253 309 213 7 chr2 21590795 21590931 -229096923 + L2 LINE L2 3094 3257 -15 399 311 34 53 chr2 21591466 21591675 -229096179 + MIR3 SINE MIR 3 207 -1 198 239 65 0 chr2 21593761 21593807 -229094047 + L2 LINE L2 3257 3305 -8 460 331 49 37 chr2 21593831 21594076 -229093778 + MIR SINE MIR 13 260 -2 26 0 0 0 chr2 21595061 21595087 -229092767 + AT_rich Low_complexity Low_complexity 1 26 0 755 214 102 102 chr2 21595914 21596066 -229091788 + L1M4 LINE L1 3842 3993 -2153 338 159 0 0 chr2 21596066 21596129 -229091725 + L1PA16 LINE L1 6095 6157 -9 755 214 102 102 chr2 21596129 21596616 -229091238 + L1M4 LINE L1 3992 4481 -1665 757 308 19 5 chr2 21596796 21597041 -229090813 - MIR SINE MIR -10 252 6 992 170 75 85 chr2 21598429 21598743 -229089111 + MSTA LTR MaLR 1 388 -38 1956 164 0 3 chr2 21598743 21599054 -229088800 - AluJb SINE Alu -2 310 1 992 170 75 85 chr2 21599054 21599093 -229088761 + MSTA LTR MaLR 388 426 0 1608 206 19 25 chr2 21599154 21599513 -229088341 + MLT1A1 LTR MaLR 5 361 -4 440 330 33 14 chr2 21599622 21599834 -229088020 - MIR SINE MIR 0 262 47 677 199 12 2 chr2 21600284 21600565 -229087289 + MLT1A1 LTR MaLR 29 363 -2 204 67 0 0 chr2 21600972 21601002 -229086852 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 254 283 0 0 chr2 21601038 21601091 -229086763 + MIR SINE MIR 51 103 -159 187 247 144 52 chr2 21601466 21601563 -229086291 + L2 LINE L2 3208 3313 0 299 245 10 71 chr2 21601641 21601739 -229086115 - MIR SINE MIR -75 133 42 462 167 24 12 chr2 21603533 21603617 -229084237 + MLT1A1 LTR MaLR 1 85 -280 1226 139 135 87 chr2 21603718 21604006 -229083848 - AluJb SINE Alu 0 302 1 33 56 0 0 chr2 21604197 21604251 -229083603 + AT_rich Low_complexity Low_complexity 1 54 0 1264 186 52 0 chr2 21604731 21605036 -229082818 - MER33 DNA MER1_type -13 311 1 462 262 139 58 chr2 21605037 21605147 -229082707 + MER5A DNA MER1_type 4 135 -54 1915 124 0 32 chr2 21605147 21605450 -229082404 - AluSc SINE Alu 0 298 5 462 262 139 58 chr2 21605450 21605510 -229082344 + MER5A DNA MER1_type 135 189 0 2261 111 3 0 chr2 21606896 21607194 -229080660 + AluSg SINE Alu 1 299 -11 1218 209 45 73 chr2 21608000 21608397 -229079457 - MLT1B LTR MaLR 0 390 8 397 144 58 29 chr2 21610790 21610894 -229076960 - MER53 DNA DNA -70 119 13 566 259 103 19 chr2 21611381 21611806 -229076048 - L1M4 LINE L1 -3572 2574 2114 591 318 79 65 chr2 21612442 21613011 -229074843 - HAL1 LINE L1 -1111 1396 820 1761 281 27 38 chr2 21613137 21613686 -229074168 + MLT1E LTR MaLR 51 593 0 2861 145 23 0 chr2 21615133 21615616 -229072238 - L1PB1 LINE L1 -1 6866 6373 304 45 0 0 chr2 21615626 21615670 -229072184 - L1PA6 LINE L1 -2 6152 6109 9854 183 46 31 chr2 21615671 21620195 -229067659 - L1PB1 LINE L1 -1209 5653 903 681 289 24 0 chr2 21620280 21620488 -229067366 + MIR SINE MIR 46 258 -4 33 0 0 0 chr2 21620734 21620767 -229067087 + AT_rich Low_complexity Low_complexity 1 33 0 1685 114 36 112 chr2 21622605 21623000 -229064854 + L1MA2 LINE L1 5932 6304 0 395 316 40 0 chr2 21626541 21626693 -229061161 + L1MEc LINE L1 20 177 -6219 * 816 269 100 24 chr2 21626690 21627278 -229060576 + L1MEc LINE L1 1005 1637 -4759 3660 63 0 11 chr2 21627427 21627904 -229059950 - L1PA7 LINE L1 -4 6150 5679 1659 153 66 38 chr2 21628196 21628561 -229059293 + THE1C LTR MaLR 1 375 0 9628 137 12 39 chr2 21628563 21630186 -229057668 + THE1C-int LTR MaLR 3 1580 0 1921 120 67 25 chr2 21630187 21630546 -229057308 + THE1C LTR MaLR 2 375 0 356 283 90 21 chr2 21631906 21632051 -229055803 + MIR SINE MIR 90 244 -18 200 242 91 15 chr2 21633090 21633156 -229054698 + L2 LINE L2 3232 3302 -11 1972 124 10 25 chr2 21633785 21634099 -229053755 - AluSx SINE Alu -3 309 1 209 286 175 3 chr2 21634258 21634352 -229053502 - L2 LINE L2 -16 3297 3141 5971 103 13 6 chr2 21634877 21635928 -229051926 + L1PA14 LINE L1 5098 6157 -4 2139 86 0 4 chr2 21635973 21636240 -229051614 + AluSq SINE Alu 23 288 -25 634 300 31 24 chr2 21636328 21636615 -229051239 - L1ME LINE L1 -357 5813 5525 271 373 14 5 chr2 21636662 21636879 -229050975 - L1MEc LINE L1 -4768 1628 1410 360 318 27 20 chr2 21637032 21637180 -229050674 - L1MEc LINE L1 -5269 936 788 308 325 53 105 chr2 21637361 21638030 -229049824 - L2 LINE L2 -542 2772 2199 2651 77 0 0 chr2 21638030 21638379 -229049475 - L1PA8 LINE L1 0 6172 5824 308 325 53 105 chr2 21638379 21638984 -229048870 - L2 LINE L2 -1115 2199 1564 2189 111 3 0 chr2 21639075 21639372 -229048482 + AluSg SINE Alu 2 299 -11 372 259 36 54 chr2 21639468 21639634 -229048220 - MIR SINE MIR -3 259 97 239 326 47 0 chr2 21639662 21639748 -229048106 - MIR SINE MIR -155 107 18 181 328 15 0 chr2 21639749 21639816 -229048038 - MIR SINE MIR -54 208 141 268 313 43 18 chr2 21640451 21640614 -229047240 - L1ME LINE L1 -364 5757 5591 23 0 0 0 chr2 21640628 21640651 -229047203 + AT_rich Low_complexity Low_complexity 1 23 0 226 277 44 101 chr2 21643277 21643436 -229044418 - L3 LINE CR1 -48 1529 1380 363 320 26 26 chr2 21643484 21643640 -229044214 + MIR3 SINE MIR 25 180 -28 27 0 0 0 chr2 21643690 21643717 -229044137 + AT_rich Low_complexity Low_complexity 1 27 0 235 306 108 18 chr2 21644849 21644960 -229042894 + MIR SINE MIR 28 148 -114 1539 151 19 28 chr2 21645010 21645328 -229042526 - L1M2 LINE L1 -682 5618 5304 455 243 73 0 chr2 21645320 21645456 -229042398 - L1MA4 LINE L1 0 6300 6155 * 3571 173 16 20 chr2 21645434 21646220 -229041634 - L1 LINE L1 -778 5368 4586 2826 166 100 19 chr2 21646218 21646850 -229041004 + L1MA6 LINE L1 5605 6287 -13 * 738 339 91 16 chr2 21646978 21647364 -229040490 - LTR16B LTR ERVL -49 415 1 1345 313 131 57 chr2 21647450 21648444 -229039410 - L2 LINE L2 -353 2961 1895 806 160 15 0 chr2 21649152 21649283 -229038571 + FLAM_C SINE Alu 1 133 0 1004 289 74 16 chr2 21649578 21649941 -229037913 + L3 LINE CR1 1178 1561 -16 2174 148 28 3 chr2 21650156 21650520 -229037334 - Tigger4(Zombi) DNA MER2_type 0 2731 2359 482 176 24 0 chr2 21650542 21650627 -229037227 - Tigger4(Zombi) DNA MER2_type -2644 87 1 3076 206 30 89 chr2 21651118 21652424 -229035430 - L1M2 LINE L1 -597 5694 4482 2327 215 25 23 chr2 21652413 21653012 -229034842 - L1M2 LINE L1 -2227 3919 3320 * 1560 249 11 19 chr2 21653011 21653389 -229034465 + L1M3e LINE L1 1734 2108 -4922 * 8050 200 49 17 chr2 21653416 21656822 -229031032 + L1MA4A LINE L1 2 6999 -6 1150 261 45 70 chr2 21656850 21657521 -229030333 + L1M4c LINE L1 990 1643 -4741 241 344 142 16 chr2 21657885 21658132 -229029722 - L2 LINE L2 -44 3228 2951 666 236 133 10 chr2 21658839 21659042 -229028812 + MIR SINE MIR 15 242 -20 757 284 21 19 chr2 21660797 21660891 -229026963 - L2 LINE L2 -186 3127 3035 2177 107 7 0 chr2 21660891 21661180 -229026674 + AluSg SINE Alu 1 291 -19 757 284 21 19 chr2 21661180 21661433 -229026421 - L2 LINE L2 -278 3035 2780 354 280 128 44 chr2 21661461 21661711 -229026143 + L2 LINE L2 2819 3089 -224 318 255 10 20 chr2 21661718 21661820 -229026034 - LTR33A LTR ERVL -10 513 413 230 191 0 32 chr2 21662362 21662425 -229025429 + (CCA)n Simple_repeat Simple_repeat 3 63 0 279 114 0 0 chr2 21662929 21662973 -229024881 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 682 329 82 30 chr2 21662975 21663404 -229024450 - L2 LINE L2 -15 3257 2807 234 298 53 26 chr2 21663450 21663564 -229024290 - L2 LINE L2 -897 2417 2301 1217 114 6 6 chr2 21663823 21663998 -229023856 + AluSx SINE Alu 1 175 -137 2473 67 0 0 chr2 21664158 21664455 -229023399 + AluY SINE Alu 1 297 -14 1074 231 154 23 chr2 21664473 21664902 -229022952 + MLT1H LTR MaLR 35 555 0 371 303 9 9 chr2 21664924 21665033 -229022821 - HERVL LTR ERVL -1195 4459 4351 22 0 0 0 chr2 21665795 21665817 -229022037 + AT_rich Low_complexity Low_complexity 1 22 0 1569 192 47 27 chr2 21665909 21666274 -229021580 + THE1C LTR MaLR 4 375 0 260 338 47 20 chr2 21666529 21666677 -229021177 - MLT1J2 LTR MaLR -40 410 259 412 238 35 14 chr2 21666778 21666921 -229020933 - MER5C DNA MER1_type -96 228 83 3802 166 27 3 chr2 21666922 21667597 -229020257 - L1PA15 LINE L1 -7 6158 5468 373 291 148 13 chr2 21668606 21668836 -229019018 - L1MC/D LINE L1 -788 5571 5311 228 313 65 34 chr2 21669236 21669498 -229018356 - L1MC/D LINE L1 -1315 4831 4562 358 302 165 32 chr2 21669801 21670202 -229017652 - L1MC/D LINE L1 -2884 3262 2809 578 274 108 26 chr2 21670300 21670903 -229016951 - L1MC/D LINE L1 -3381 2765 2114 450 312 86 41 chr2 21671539 21671808 -229016046 - HAL1 LINE L1 -1111 1396 1116 14503 227 34 14 chr2 21672248 21673871 -229013983 - L1P4 LINE L1 -680 6923 5334 4634 59 7 2 chr2 21673871 21674464 -229013390 - L1PA7 LINE L1 0 6154 5559 14503 227 34 14 chr2 21674464 21675201 -229012653 - L1P4 LINE L1 -2269 5334 4613 1686 186 0 0 chr2 21675201 21675476 -229012378 - AluSx SINE Alu -11 301 27 14503 227 34 14 chr2 21675476 21678056 -229009798 - L1P4 LINE L1 -2990 4613 1884 318 284 57 0 chr2 21678057 21678145 -229009709 - MER5C DNA MER1_type -229 95 3 260 309 59 53 chr2 21678145 21678224 -229009630 - MLT1J2 LTR MaLR -297 153 71 2141 194 24 5 chr2 21678224 21678646 -229009208 - MSTB1 LTR MaLR 0 432 3 260 309 59 53 chr2 21678646 21678718 -229009136 - MLT1J2 LTR MaLR -379 71 1 206 340 41 48 chr2 21679264 21679411 -229008443 - L2 LINE L2 -844 2470 2325 1536 261 167 91 chr2 21680688 21681240 -229006614 + MLT1E2 LTR MaLR 5 598 -56 395 299 92 57 chr2 21681818 21682132 -229005722 - HAL1 LINE L1 -1291 1216 892 315 0 0 0 chr2 21682616 21682651 -229005203 + (TA)n Simple_repeat Simple_repeat 2 36 0 1927 106 4 29 chr2 21682667 21682942 -229004912 - AluSx SINE Alu -30 282 15 380 305 126 0 chr2 21683307 21683474 -229004380 - HAL1 LINE L1 -2318 189 2 219 139 0 0 chr2 21683959 21683995 -229003859 + (ATG)n Simple_repeat Simple_repeat 3 38 0 188 280 53 53 chr2 21684713 21684788 -229003066 + L3 LINE CR1 1370 1444 -133 376 213 68 108 chr2 21684936 21685141 -229002713 - MIR3 SINE MIR -28 180 31 271 346 51 56 chr2 21685376 21685610 -229002244 + L2 LINE L2 3030 3262 -10 906 280 115 7 chr2 21686486 21686765 -229001089 + MLT1I LTR MaLR 101 409 0 780 288 21 21 chr2 21688059 21688299 -228999555 - MIR SINE MIR 0 262 23 264 294 181 23 chr2 21688609 21688830 -228999024 + MIR SINE MIR 7 262 0 195 186 0 0 chr2 21690789 21690832 -228997022 + CT-rich Low_complexity Low_complexity 2 44 0 5197 130 66 2 chr2 21692236 21692577 -228995277 - L1PA13 LINE L1 -1 6162 5844 207 0 0 0 chr2 21692577 21692600 -228995254 + (TTA)n Simple_repeat Simple_repeat 2 24 0 5197 130 66 2 chr2 21692600 21693311 -228994543 - L1PA13 LINE L1 -319 5844 5047 368 177 13 25 chr2 21693312 21693391 -228994463 + AluJb SINE Alu 29 106 -196 207 338 54 0 chr2 21693453 21693527 -228994327 - MIR SINE MIR -131 131 54 234 352 96 0 chr2 21693684 21693809 -228994045 - MIR SINE MIR -124 138 2 513 306 73 16 chr2 21693829 21694074 -228993780 - MIR SINE MIR -3 259 1 215 280 0 20 chr2 21694193 21694243 -228993611 - L2 LINE L2 -226 3046 2998 857 219 5 19 chr2 21695066 21695276 -228992578 - L1MB8 LINE L1 0 6178 5972 930 216 30 15 chr2 21695618 21695817 -228992037 - MER82 DNA MER2_type 0 653 452 267 352 48 14 chr2 21695857 21696002 -228991852 + MIR SINE MIR 2 151 -111 49 32 0 0 chr2 21696045 21696108 -228991746 + AT_rich Low_complexity Low_complexity 1 63 0 284 284 0 23 chr2 21696111 21696199 -228991655 - MER82 DNA MER2_type -567 86 1 238 238 16 16 chr2 21696538 21696601 -228991253 - MLT1J LTR MaLR -146 365 303 26 0 0 0 chr2 21697486 21697512 -228990342 + AT_rich Low_complexity Low_complexity 1 26 0 29 28 0 0 chr2 21697589 21697625 -228990229 + AT_rich Low_complexity Low_complexity 1 36 0 389 337 47 11 chr2 21698011 21698201 -228989653 + MIR SINE MIR 7 203 -59 340 294 33 0 chr2 21698293 21698385 -228989469 + polypurine Low_complexity Low_complexity 6 100 0 873 203 50 68 chr2 21698934 21699156 -228988698 + MER20 DNA MER1_type 2 219 0 27 62 0 0 chr2 21699839 21699887 -228987967 + AT_rich Low_complexity Low_complexity 1 48 0 241 300 0 0 chr2 21700825 21700895 -228986959 + L1ME LINE L1 2959 3028 -3118 310 336 139 40 chr2 21701141 21701617 -228986237 + L1ME LINE L1 3291 3813 -2333 282 282 29 10 chr2 21702136 21702239 -228985615 + L1ME LINE L1 4506 4610 -1536 42508 36 23 1 chr2 21702815 21708853 -228979001 - L1PA3 LINE L1 0 6155 1 289 297 7 36 chr2 21709454 21709592 -228978262 + L1ME LINE L1 5612 5745 -376 286 242 125 92 chr2 21710431 21710551 -228977303 - L2 LINE L2 -1 3312 3189 248 224 0 0 chr2 21710797 21710846 -228977008 + MER3 DNA MER1_type 42 90 -119 * 258 204 32 54 chr2 21710825 21710918 -228976936 - MER3 DNA MER1_type -118 91 1 1985 139 0 0 chr2 21710947 21711228 -228976626 - AluSx SINE Alu -29 283 3 638 318 218 3 chr2 21712619 21712940 -228974914 - L2 LINE L2 0 3313 2924 333 283 25 33 chr2 21712936 21713056 -228974798 - L2 LINE L2 -580 2734 2616 * 248 169 51 0 chr2 21713692 21713751 -228974103 - L1MCa LINE L1 -4359 2067 2006 245 182 18 0 chr2 21713751 21713806 -228974048 + (TA)n Simple_repeat Simple_repeat 1 56 0 33 0 0 0 chr2 21714356 21714389 -228973465 + AT_rich Low_complexity Low_complexity 1 33 0 185 286 48 32 chr2 21714993 21715056 -228972798 - L2 LINE L2 -18 3295 3232 1942 130 3 3 chr2 21716011 21716322 -228971532 + AluSx SINE Alu 1 311 0 2659 244 99 40 chr2 21717010 21718066 -228969788 + L1MC4 LINE L1 6884 8002 -40 363 238 38 12 chr2 21718073 21718233 -228969621 + (TA)n Simple_repeat Simple_repeat 2 165 0 527 211 18 0 chr2 21718323 21718437 -228969417 - L1MD2 LINE L1 -4 6355 6240 230 81 0 0 chr2 21718437 21718474 -228969380 + L1MC4 LINE L1 8006 8042 0 304 318 63 8 chr2 21718721 21718847 -228969007 + MIR SINE MIR 121 253 -9 21 0 0 0 chr2 21719410 21719431 -228968423 + AT_rich Low_complexity Low_complexity 1 21 0 679 142 97 0 chr2 21719761 21719895 -228967959 + L1MA4 LINE L1 6147 6293 -7 249 286 224 56 chr2 21720197 21720358 -228967496 + MIR SINE MIR 3 190 -72 1637 186 3 7 chr2 21722589 21722885 -228964969 + 7SLRNA srpRNA srpRNA 1 295 -25 3496 238 42 8 chr2 21723351 21724242 -228963612 - L1MB5 LINE L1 0 6672 5752 2013 234 76 33 chr2 21724261 21725049 -228962805 - L1MB5 LINE L1 -4741 1905 1043 444 123 12 12 chr2 21725049 21725130 -228962724 - L1PA10 LINE L1 -10 6158 6078 2013 234 76 33 chr2 21725130 21725365 -228962489 - L1MB5 LINE L1 -5603 1043 820 270 350 87 0 chr2 21727178 21727281 -228960573 - L2 LINE L2 -18 3254 3143 295 314 13 70 chr2 21727378 21727437 -228960417 - MER5A DNA MER1_type -26 163 102 1788 133 98 14 chr2 21727437 21727783 -228960071 + THE1C LTR MaLR 1 375 0 295 314 13 70 chr2 21727783 21727879 -228959975 - MER5A DNA MER1_type -87 102 17 1596 180 70 44 chr2 21728794 21729177 -228958677 - MER21B LTR ERV1 -11 852 460 850 224 90 0 chr2 21729173 21729374 -228958480 + MLT1E2 LTR MaLR 406 624 -2 * 193 238 0 0 chr2 21730899 21730941 -228956913 - MIR SINE MIR -116 146 105 2619 82 0 3 chr2 21731176 21731541 -228956313 - L1P LINE L1 -3961 2185 1822 1968 62 23 0 chr2 21731541 21731797 -228956057 + L1PA6 LINE L1 5893 6154 0 313 353 26 7 chr2 21732273 21732426 -228955428 + MIR SINE MIR 94 249 -13 366 273 106 45 chr2 21733561 21733752 -228954102 - MIR SINE MIR 0 262 55 213 268 24 126 chr2 21734121 21734248 -228953606 + L2 LINE L2 3141 3254 -18 25 51 0 0 chr2 21734704 21734743 -228953111 + AT_rich Low_complexity Low_complexity 1 39 0 212 255 0 0 chr2 21735816 21735863 -228951991 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 21736486 21736525 -228951329 + AT_rich Low_complexity Low_complexity 1 39 0 231 204 20 0 chr2 21737165 21737214 -228950640 + (CA)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr2 21737308 21737328 -228950526 + (TTA)n Simple_repeat Simple_repeat 3 22 0 1387 62 6 0 chr2 21737328 21737506 -228950348 - L1PA7 LINE L1 -18 6136 5958 335 360 64 12 chr2 21738072 21738244 -228949610 - MIR SINE MIR -46 216 36 265 367 33 0 chr2 21738283 21738403 -228949451 + MIR3 SINE MIR 40 163 -45 255 255 83 83 chr2 21740253 21740445 -228947409 + L2 LINE L2 1808 1999 -1315 22 0 0 0 chr2 21740476 21740498 -228947356 + AT_rich Low_complexity Low_complexity 1 22 0 2239 127 8 23 chr2 21740685 21741056 -228946798 + THE1B LTR MaLR 1 428 0 518 336 61 9 chr2 21742072 21742286 -228945568 - MIR SINE MIR -18 244 20 631 280 24 6 chr2 21742757 21742925 -228944929 + MER5B DNA MER1_type 1 171 -7 2059 146 10 0 chr2 21743125 21743427 -228944427 + AluSx SINE Alu 1 305 -7 400 298 55 29 chr2 21743675 21743880 -228943974 - MIR SINE MIR -24 238 30 1855 115 22 15 chr2 21745904 21746173 -228941681 + AluSp SINE Alu 26 296 -17 502 325 48 17 chr2 21746924 21747155 -228940699 + MIR SINE MIR 23 260 -2 562 205 30 95 chr2 21748125 21748325 -228939529 + MER5A DNA MER1_type 1 187 -2 2233 107 0 7 chr2 21749655 21749965 -228937889 - AluSc SINE Alu -1 308 1 912 191 8 89 chr2 21750051 21750308 -228937546 - L1MA9 LINE L1 -38 6274 6039 1444 116 5 0 chr2 21750309 21750533 -228937321 - HSMAR2 DNA Mariner -1 1301 1077 300 365 56 0 chr2 21750680 21750787 -228937067 + L2 LINE L2 3115 3227 -45 480 333 57 37 chr2 21750952 21751198 -228936656 - MIR SINE MIR -10 252 2 241 184 20 0 chr2 21751233 21751282 -228936572 + GA-rich Low_complexity Low_complexity 4 53 0 1439 293 160 25 chr2 21751416 21752249 -228935605 + L2 LINE L2 2243 3189 -124 745 317 90 15 chr2 21752298 21752566 -228935288 + MER45C DNA AcHobo 1 288 -665 1262 201 0 62 chr2 21752569 21752857 -228934997 - AluJo SINE Alu -14 298 29 300 196 0 0 chr2 21753153 21753204 -228934650 + MER45B DNA AcHobo 989 1039 -1 202 232 36 18 chr2 21753248 21753304 -228934550 + L2 LINE L2 3254 3310 -3 364 274 63 29 chr2 21755813 21755988 -228931866 + L1ME LINE L1 5520 5700 -421 309 279 41 41 chr2 21756081 21756203 -228931651 + L1ME LINE L1 5544 5665 -2143 566 205 139 36 chr2 21756248 21756414 -228931440 - MER58A DNA MER1_type -1 223 41 22 0 0 0 chr2 21756545 21756567 -228931287 + AT_rich Low_complexity Low_complexity 1 22 0 601 285 186 44 chr2 21756828 21757288 -228930566 - MLT1H1 LTR MaLR -72 495 1 22 0 0 0 chr2 21757325 21757347 -228930507 + AT_rich Low_complexity Low_complexity 1 22 0 425 284 54 64 chr2 21758702 21758998 -228928856 + MLT1L LTR MaLR 6 298 -317 272 252 0 10 chr2 21759029 21759132 -228928722 + (TA)n Simple_repeat Simple_repeat 1 102 0 261 222 0 0 chr2 21759166 21759229 -228928625 + (TG)n Simple_repeat Simple_repeat 2 64 0 706 250 28 0 chr2 21759230 21759374 -228928480 - FRAM SINE Alu -25 151 4 530 268 70 0 chr2 21759385 21759527 -228928327 + MLT1L LTR MaLR 341 492 -123 302 359 56 0 chr2 21759629 21759796 -228928058 + MIR SINE MIR 32 206 -56 853 160 15 73 chr2 21760020 21760226 -228927628 + L1MA9 LINE L1 6119 6312 0 1205 109 11 5 chr2 21760652 21760836 -228927018 - L1PB2 LINE L1 0 6151 5967 260 281 52 30 chr2 21761740 21761875 -228925979 + L1ME2 LINE L1 6016 6153 -11 312 314 69 25 chr2 21761999 21762158 -228925696 + L1ME LINE L1 5676 5841 -280 3314 153 20 15 chr2 21762199 21762793 -228925061 + L1MC1 LINE L1 5601 6197 -136 22 56 0 0 chr2 21762852 21762888 -228924966 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 21763333 21763361 -228924493 + AT_rich Low_complexity Low_complexity 1 28 0 532 267 108 46 chr2 21763595 21764048 -228923806 + L1ME4a LINE L1 5355 5835 -286 613 316 80 4 chr2 21764097 21764334 -228923520 + MIR SINE MIR 7 261 -1 276 291 47 12 chr2 21765896 21765982 -228921872 - L2 LINE L2 -20 3293 3205 1898 131 31 69 chr2 21766189 21766539 -228921315 - MER1B DNA MER1_type 0 337 1 201 121 0 0 chr2 21766956 21766989 -228920865 + (CAATT)n Simple_repeat Simple_repeat 3 35 0 286 252 35 112 chr2 21767739 21767882 -228919972 + MIR SINE MIR 20 151 -111 393 188 0 0 chr2 21768809 21768889 -228918965 + (CA)n Simple_repeat Simple_repeat 2 81 0 181 148 93 0 chr2 21769962 21770016 -228917838 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 343 288 63 44 chr2 21770255 21770460 -228917394 + LTR33A LTR ERVL 312 520 -3 21 36 0 0 chr2 21771134 21771162 -228916692 + AT_rich Low_complexity Low_complexity 1 28 0 1781 133 0 4 chr2 21773080 21773335 -228914519 - AluSx SINE Alu -2 310 57 859 138 0 0 chr2 21773337 21773460 -228914394 - AluSq/x SINE Alu -189 123 1 201 359 41 14 chr2 21776474 21776619 -228911235 - MIR SINE MIR -46 216 68 22 0 0 0 chr2 21776845 21776867 -228910987 + AT_rich Low_complexity Low_complexity 1 22 0 1088 162 17 6 chr2 21778015 21778194 -228909660 + MER5A DNA MER1_type 2 182 -7 387 327 39 6 chr2 21778405 21778561 -228909293 + MIR SINE MIR 47 207 -55 185 422 0 20 chr2 21779935 21780037 -228907817 - MIR SINE MIR -85 123 24 24 53 0 0 chr2 21780258 21780296 -228907558 + AT_rich Low_complexity Low_complexity 1 38 0 1944 93 0 12 chr2 21780396 21780653 -228907201 + AluSg SINE Alu 46 299 -11 2223 123 23 11 chr2 21781270 21781621 -228906233 - THE1A LTR MaLR 0 355 1 11072 118 4 3 chr2 21781621 21783199 -228904655 - THE1A-int LTR MaLR 0 1580 1 2266 113 14 11 chr2 21783199 21783553 -228904301 - THE1A LTR MaLR 0 355 1 443 259 7 43 chr2 21783637 21783776 -228904078 - MIR SINE MIR -37 225 92 226 345 36 50 chr2 21785314 21785453 -228902401 + L2 LINE L2 3177 3313 0 2433 71 0 0 chr2 21785544 21785852 -228902002 - AluY SINE Alu -3 308 1 877 201 13 0 chr2 21786187 21786341 -228901513 - FRAM SINE Alu -18 158 3 29 106 0 0 chr2 21786369 21786482 -228901372 + AT_rich Low_complexity Low_complexity 1 113 0 1810 140 0 76 chr2 21787398 21787553 -228900301 + AluSx SINE Alu 1 119 -193 489 62 0 0 chr2 21787553 21787618 -228900236 + (CA)n Simple_repeat Simple_repeat 2 66 0 1810 140 0 76 chr2 21787618 21787791 -228900063 + AluSx SINE Alu 119 304 -8 315 335 79 70 chr2 21789043 21789676 -228898178 + HAL1 LINE L1 907 1545 -962 23 0 0 0 chr2 21789880 21789903 -228897951 + AT_rich Low_complexity Low_complexity 1 23 0 245 274 0 40 chr2 21789966 21790090 -228897764 + GA-rich Low_complexity Low_complexity 2 120 0 213 39 0 0 chr2 21790254 21790280 -228897574 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 287 14 35 chr2 21790323 21790466 -228897388 + GA-rich Low_complexity Low_complexity 3 142 0 1605 229 70 11 chr2 21790507 21791039 -228896815 + L1M3c LINE L1 1048 1610 -4531 1779 178 42 28 chr2 21791051 21791523 -228896331 + MLT2A2 LTR ERVL 6 486 -68 767 159 153 0 chr2 21791545 21791708 -228896146 + L1M3 LINE L1 5613 5800 -534 * 11362 228 23 9 chr2 21791707 21795666 -228892188 - L1PA16 LINE L1 -4 6162 2150 364 291 66 20 chr2 21797475 21797626 -228890228 - MIR SINE MIR -24 238 81 15464 28 6 1 chr2 21797753 21800380 -228887474 + L1PA3 LINE L1 3533 6167 0 306 50 0 0 chr2 21801043 21801083 -228886771 + (TG)n Simple_repeat Simple_repeat 2 41 0 260 307 23 11 chr2 21801518 21801606 -228886248 + L2 LINE L2 2502 2590 -724 1248 138 47 63 chr2 21801606 21801860 -228885994 - MER1B DNA MER1_type 0 339 130 278 234 26 26 chr2 21801889 21801966 -228885888 + L2 LINE L2 2577 2653 -661 2260 66 10 13 chr2 21802256 21802561 -228885293 - L1PA8 LINE L1 0 6172 5869 5419 171 25 14 chr2 21802598 21803109 -228884745 - L1MA8 LINE L1 -3 6288 5784 2485 59 3 10 chr2 21803109 21803415 -228884439 - AluY SINE Alu -6 305 2 5419 171 25 14 chr2 21803415 21804760 -228883094 - L1MA8 LINE L1 -507 5784 4411 211 189 0 0 chr2 21804794 21804831 -228883023 + (CCCTAA)n Simple_repeat Simple_repeat 1 37 0 1932 178 28 3 chr2 21804877 21805232 -228882622 - THE1B LTR MaLR 0 364 1 399 194 0 0 chr2 21805256 21805328 -228882526 + L1PB1 LINE L1 129 200 -6663 1455 148 12 27 chr2 21805330 21805587 -228882267 + L1PB1 LINE L1 636 888 -5975 * 8748 200 59 39 chr2 21805584 21805871 -228881983 + L1PB1 LINE L1 3217 3497 -3365 249 211 0 39 chr2 21805871 21805923 -228881931 + LTR27 LTR ERV1 587 636 0 8748 200 59 39 chr2 21805923 21807926 -228879928 + L1PB1 LINE L1 3497 5604 -1258 1914 179 39 26 chr2 21807926 21808480 -228879374 + MLT2A2 LTR ERVL 1 554 0 4869 196 13 20 chr2 21808481 21809708 -228878146 + L1PB1 LINE L1 5601 6820 -47 939 216 51 47 chr2 21809731 21809883 -228877971 + MER2 DNA MER2_type 88 243 -102 2246 98 0 29 chr2 21809883 21810190 -228877664 + AluY SINE Alu 1 298 -13 939 216 51 47 chr2 21810190 21810291 -228877563 + MER2 DNA MER2_type 243 342 -3 794 157 5 38 chr2 21810292 21810477 -228877377 - L1MA8 LINE L1 -1732 4414 4236 2912 192 4 0 chr2 21810479 21811027 -228876827 - L1MA8 LINE L1 -1967 4179 3630 227 277 15 31 chr2 21811191 21811256 -228876598 - MLT1I LTR MaLR -280 129 66 1836 132 33 10 chr2 21811264 21811567 -228876287 - AluSg SINE Alu 0 310 1 399 300 61 8 chr2 21812240 21812419 -228875435 - MIR SINE MIR -10 252 29 207 151 57 19 chr2 21812745 21812798 -228875056 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 886 284 94 79 chr2 21813411 21814007 -228873847 - MER77 LTR ERV1 0 605 1 233 256 116 14 chr2 21814252 21814350 -228873504 - MLT1I LTR MaLR -260 149 42 448 299 120 14 chr2 21814785 21815002 -228872852 - MIR SINE MIR -11 251 12 2393 103 16 47 chr2 21815420 21815459 -228872395 - THE1C LTR MaLR 0 375 336 2213 132 0 0 chr2 21815459 21815769 -228872085 + AluSx SINE Alu 1 310 -2 2393 103 16 47 chr2 21815769 21816116 -228871738 - THE1C LTR MaLR -39 336 1 24789 56 39 3 chr2 21816398 21819832 -228868022 - L1P LINE L1 -2589 3557 1 200 225 14 14 chr2 21820302 21820373 -228867481 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 310 215 112 116 chr2 21820388 21820452 -228867402 - L1ME4a LINE L1 -201 5920 5857 276 30 0 0 chr2 21820452 21820485 -228867369 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 215 112 116 chr2 21820485 21820575 -228867279 - L1ME4a LINE L1 -264 5857 5765 1846 124 7 25 chr2 21820575 21820850 -228867004 - AluSp SINE Alu -5 308 39 310 215 112 116 chr2 21820850 21820927 -228866927 - L1ME4a LINE L1 -356 5765 5689 194 375 23 16 chr2 21821494 21821507 -228866347 + L2 LINE L2 2851 2862 -410 387 0 0 0 chr2 21821507 21821550 -228866304 + (TG)n Simple_repeat Simple_repeat 2 44 0 194 375 23 16 chr2 21821550 21821664 -228866190 + L2 LINE L2 2862 2979 -293 210 71 0 0 chr2 21821744 21821772 -228866082 + (TG)n Simple_repeat Simple_repeat 1 28 0 1546 199 59 0 chr2 21822731 21823052 -228864802 + Tigger7 DNA MER2_type 1 340 -393 778 150 8 0 chr2 21823065 21823198 -228864656 + Tigger7 DNA MER2_type 2454 2587 0 1003 329 50 2 chr2 21823436 21823856 -228863998 + L1M2 LINE L1 11 450 -6399 10744 225 59 18 chr2 21824721 21825288 -228862566 + L1P5 LINE L1 1071 1613 -5245 2178 118 0 0 chr2 21825288 21825585 -228862269 + AluY SINE Alu 1 297 -14 10744 225 59 18 chr2 21825585 21830174 -228857680 + L1P5 LINE L1 1613 6418 -440 214 255 104 28 chr2 21830429 21830535 -228857319 - L2 LINE L2 0 3313 3200 241 296 119 63 chr2 21833184 21833343 -228854511 - MIR SINE MIR -60 202 35 3290 147 11 11 chr2 21834622 21835146 -228852708 + MER1A DNA MER1_type 4 527 0 362 284 65 60 chr2 21835408 21835609 -228852245 - LTR33 LTR ERVL -319 202 1 858 321 148 32 chr2 21835678 21836358 -228851496 + L2 LINE L2 2122 2722 -591 2128 118 65 8 chr2 21836358 21836713 -228851141 - THE1C LTR MaLR 0 375 1 7197 182 34 34 chr2 21836713 21838293 -228849561 - THE1C-int LTR MaLR 0 1580 1 2212 126 41 16 chr2 21838293 21838659 -228849195 - THE1C LTR MaLR 0 375 1 858 321 148 32 chr2 21838659 21839022 -228848832 + L2 LINE L2 2721 3312 -1 21 71 0 0 chr2 21839283 21839325 -228848529 + AT_rich Low_complexity Low_complexity 1 42 0 180 250 0 0 chr2 21839900 21839940 -228847914 + L2 LINE L2 3274 3313 0 370 312 41 7 chr2 21840228 21840379 -228847475 + MIR SINE MIR 52 206 -56 323 295 8 78 chr2 21841299 21841428 -228846426 - L2 LINE L2 -219 3053 2934 2150 130 3 0 chr2 21841647 21841948 -228845906 + AluSp SINE Alu 1 302 -11 427 328 206 23 chr2 21842115 21842755 -228845099 - L2 LINE L2 -809 2505 1749 2346 115 0 0 chr2 21843770 21844082 -228843772 + AluSx SINE Alu 1 312 0 278 304 20 20 chr2 21844254 21844356 -228843498 - MLT1I LTR MaLR -189 220 119 361 287 154 47 chr2 21844735 21845014 -228842840 + L2 LINE L2 3005 3313 0 268 82 20 20 chr2 21845503 21845552 -228842302 + (TC)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 21845775 21845803 -228842051 + AT_rich Low_complexity Low_complexity 1 28 0 2157 104 7 13 chr2 21846796 21847095 -228840759 + AluY SINE Alu 1 297 -14 348 24 0 0 chr2 21847098 21847139 -228840715 + (GA)n Simple_repeat Simple_repeat 2 42 0 285 29 0 0 chr2 21848643 21848677 -228839177 + (A)n Simple_repeat Simple_repeat 1 34 0 331 347 71 31 chr2 21849704 21849900 -228837954 + MIR SINE MIR 33 236 -26 292 93 19 19 chr2 21850557 21850611 -228837243 + (TTCC)n Simple_repeat Simple_repeat 4 57 0 325 111 16 32 chr2 21851032 21851095 -228836759 - MLT2B1 LTR ERVL 0 520 459 270 261 15 0 chr2 21851121 21851186 -228836668 + (CATA)n Simple_repeat Simple_repeat 3 68 0 6387 144 11 0 chr2 21851186 21852233 -228835621 - HSMAR2 DNA Mariner -2 1300 242 620 206 29 29 chr2 21852241 21852411 -228835443 - MLT2B1 LTR ERVL -350 170 1 237 365 61 0 chr2 21853765 21853880 -228833974 + L2 LINE L2 3183 3304 -9 2030 143 0 31 chr2 21854008 21854330 -228833524 + AluSx SINE Alu 1 312 0 1166 200 0 4 chr2 21855008 21855238 -228832616 + MSTB LTR MaLR 1 229 -197 299 164 0 30 chr2 21855238 21855305 -228832549 + CT-rich Low_complexity Low_complexity 2 66 0 1027 178 50 0 chr2 21855305 21855524 -228832330 + MSTB LTR MaLR 203 432 0 230 349 72 68 chr2 21855554 21855789 -228832065 - L2 LINE L2 -1898 1416 1181 220 360 73 0 chr2 21856414 21856564 -228831290 + L2 LINE L2 3146 3306 -7 729 204 91 42 chr2 21857077 21857341 -228830513 + L1ME3A LINE L1 5881 6157 -13 407 292 64 26 chr2 21857359 21857634 -228830220 + L1ME LINE L1 5211 5493 -671 359 277 262 0 chr2 21857634 21857840 -228830014 - MIR SINE MIR -1 261 2 340 247 72 54 chr2 21858469 21858635 -228829219 + L1MEc LINE L1 2192 2360 -4036 188 338 120 15 chr2 21859172 21859305 -228828549 - L2 LINE L2 -909 2405 2259 385 299 26 62 chr2 21859389 21859533 -228828321 - HAL1b LINE L1 -602 746 598 197 33 33 0 chr2 21859533 21859563 -228828291 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 385 299 26 62 chr2 21859563 21859761 -228828093 - HAL1b LINE L1 -750 598 421 1769 39 0 5 chr2 21859761 21859968 -228827886 + AluY SINE Alu 100 305 -6 385 299 26 62 chr2 21859968 21860076 -228827778 - HAL1b LINE L1 -927 421 311 358 208 10 40 chr2 21860140 21860241 -228827613 - MLT1J LTR MaLR -13 498 401 * 481 306 33 27 chr2 21860236 21860419 -228827435 - MLT1J LTR MaLR -233 278 95 22 56 0 0 chr2 21861136 21861172 -228826682 + AT_rich Low_complexity Low_complexity 1 36 0 2218 93 3 7 chr2 21861860 21862151 -228825703 - AluSg1 SINE Alu -19 290 1 382 309 164 5 chr2 21863876 21864077 -228823777 + MIR SINE MIR 9 241 -21 244 192 58 0 chr2 21864307 21864359 -228823495 + MER3 DNA MER1_type 36 90 -119 * 829 218 5 35 chr2 21864329 21864526 -228823328 - MER3 DNA MER1_type -13 196 6 237 297 126 0 chr2 21866079 21866190 -228821664 - Charlie8 DNA MER1_type -2215 202 78 279 302 40 24 chr2 21866375 21866501 -228821353 + MIR SINE MIR 20 147 -61 201 314 49 29 chr2 21867658 21867760 -228820094 + MIR SINE MIR 97 200 -62 488 322 49 11 chr2 21868746 21868929 -228818925 + MIR SINE MIR 4 193 -69 1757 169 0 7 chr2 21869210 21869488 -228818366 - AluJb SINE Alu -23 289 14 315 246 22 84 chr2 21869855 21869996 -228817858 + MIR SINE MIR 32 162 -46 222 321 46 46 chr2 21871722 21871853 -228816001 - MIR3 SINE MIR -41 167 37 1965 58 4 25 chr2 21873109 21873386 -228814468 + L1PA4 LINE L1 5882 6152 -3 275 141 0 42 chr2 21873419 21873490 -228814364 + L1MA7 LINE L1 6223 6290 -1 21 57 0 0 chr2 21873490 21873525 -228814329 + AT_rich Low_complexity Low_complexity 1 35 0 280 191 0 0 chr2 21873620 21873667 -228814187 - L2 LINE L2 -9 3304 3258 511 180 0 6 chr2 21873726 21873834 -228814020 - L1ME2 LINE L1 -2 6332 6073 285 253 147 27 chr2 21874192 21874342 -228813512 - MIR SINE MIR -78 184 17 195 42 0 0 chr2 21874394 21874418 -228813436 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 414 295 152 35 chr2 21875512 21876057 -228811797 + L1ME4a LINE L1 5258 5866 -255 321 270 143 32 chr2 21876471 21876597 -228811257 - MER91B DNA MER1_type -11 179 40 190 298 88 35 chr2 21876921 21877035 -228810819 + MIR SINE MIR 131 250 -12 297 0 0 0 chr2 21877356 21877389 -228810465 + (TG)n Simple_repeat Simple_repeat 2 34 0 596 40 13 0 chr2 21878343 21878419 -228809435 + L1PA10 LINE L1 6091 6167 -1 185 273 52 26 chr2 21879435 21879512 -228808342 - L2 LINE L2 -12 3260 3182 * 296 254 140 18 chr2 21879500 21879614 -228808240 - MIR SINE MIR -95 167 40 289 357 36 0 chr2 21879826 21879938 -228807916 + L2 LINE L2 3157 3272 0 1765 120 33 0 chr2 21880919 21881195 -228806659 + L1PB2 LINE L1 5864 6148 -3 427 216 94 35 chr2 21881218 21881528 -228806326 - LTR48 LTR ERV1 -1 739 284 207 167 0 0 chr2 21881746 21881782 -228806072 + (TAG)n Simple_repeat Simple_repeat 3 38 0 285 213 38 12 chr2 21882987 21883067 -228804787 + L1ME2 LINE L1 1269 1350 -5073 * 290 234 209 6 chr2 21883062 21883220 -228804634 + L1ME2 LINE L1 3097 3286 -3655 733 297 87 77 chr2 21883220 21883995 -228803859 + L1MB5 LINE L1 3 784 -5758 2959 248 38 7 chr2 21884206 21885157 -228802697 + L1MB5 LINE L1 1328 2406 -4240 5496 248 24 76 chr2 21885172 21887511 -228800343 + L1MB5 LINE L1 3238 5455 -1189 2433 171 37 4 chr2 21887511 21888001 -228799853 + L1MA5 LINE L1 5795 6300 0 1884 167 0 0 chr2 21888023 21888335 -228799519 + AluSx SINE Alu 1 312 0 3889 228 28 25 chr2 21888466 21889694 -228798160 + L1MB5 LINE L1 5441 6664 -8 4844 255 73 50 chr2 21889703 21891445 -228796409 + L1ME2 LINE L1 3268 5099 -1842 1955 128 4 4 chr2 21891445 21891749 -228796105 + AluSg SINE Alu 1 304 0 4844 255 73 50 chr2 21891749 21892726 -228795128 + L1ME2 LINE L1 5099 6052 -889 378 0 0 0 chr2 21892726 21892768 -228795086 + (TA)n Simple_repeat Simple_repeat 1 42 0 2226 243 32 61 chr2 21892871 21893719 -228794135 + L1ME2 LINE L1 6113 6935 -24 252 345 137 13 chr2 21893874 21894100 -228793754 - MIR SINE MIR -1 261 8 297 339 51 21 chr2 21894253 21894489 -228793365 + L1ME LINE L1 6212 6454 -505 342 278 46 19 chr2 21896072 21896180 -228791674 + MIR SINE MIR 81 191 -71 518 351 85 37 chr2 21896555 21897097 -228790757 + L2 LINE L2 2141 2708 -606 207 349 139 16 chr2 21897304 21897433 -228790421 + L2 LINE L2 3034 3178 -94 602 281 46 10 chr2 21898484 21898680 -228789174 + MIR SINE MIR 2 204 -58 185 170 0 113 chr2 21898706 21898730 -228789124 + MIR SINE MIR 201 217 -45 2074 133 44 22 chr2 21898730 21899097 -228788757 - THE1C LTR MaLR 0 375 1 185 170 0 113 chr2 21899097 21899125 -228788729 + MIR SINE MIR 217 247 -15 213 354 25 0 chr2 21899684 21899763 -228788091 - L2 LINE L2 -2 3270 3190 1544 158 4 8 chr2 21899765 21900012 -228787842 + AluSx SINE Alu 1 246 -66 1011 161 0 0 chr2 21900028 21900208 -228787646 + (TA)n Simple_repeat Simple_repeat 1 180 0 297 239 23 0 chr2 21900215 21900303 -228787551 - L1MC4 LINE L1 -1339 6703 6614 237 303 0 0 chr2 21900295 21900384 -228787470 + L1MC4 LINE L1 6614 6702 -1340 * 264 209 121 0 chr2 21900349 21900440 -228787414 - L1MC4 LINE L1 -1339 6703 6602 261 138 11 23 chr2 21900478 21900565 -228787289 + (TA)n Simple_repeat Simple_repeat 1 86 0 234 274 9 9 chr2 21900565 21900671 -228787183 - L1MC4 LINE L1 -1323 6719 6614 268 354 145 36 chr2 21901161 21901209 -228786645 - L2 LINE L2 -666 2648 2607 1957 225 65 54 chr2 21901209 21901840 -228786014 - LTR48B LTR ERV1 -4 640 3 268 354 145 36 chr2 21901840 21902455 -228785399 - L2 LINE L2 -707 2607 1913 4088 114 21 6 chr2 21902651 21903275 -228784579 - MER41B LTR ERV1 -2 633 1 2729 205 98 13 chr2 21904681 21905387 -228782467 - L1MC3 LINE L1 -15 7770 7005 4623 145 30 18 chr2 21905388 21906210 -228781644 + L1PB3 LINE L1 5322 6153 -1 620 141 5 174 chr2 21906218 21906431 -228781423 - L1MC3 LINE L1 -785 7000 6824 238 288 0 0 chr2 21906444 21906517 -228781337 + L1MC4 LINE L1 6624 6696 -1346 255 31 0 0 chr2 21906517 21906549 -228781305 + (TG)n Simple_repeat Simple_repeat 1 32 0 999 221 0 71 chr2 21906549 21906783 -228781071 - L1MC3 LINE L1 -977 6808 6596 1528 175 51 31 chr2 21906783 21907075 -228780779 + AluJo SINE Alu 7 304 -8 999 221 0 71 chr2 21907075 21907120 -228780734 - L1MC3 LINE L1 -1189 6596 6549 925 159 33 11 chr2 21907122 21907304 -228780550 + MSTB2 LTR MaLR 272 457 0 3620 195 37 36 chr2 21907326 21908259 -228779595 - L1MC3 LINE L1 -748 5398 5276 893 237 64 10 chr2 21908326 21908621 -228779233 - L1MC3 LINE L1 -857 5289 4979 411 224 0 9 chr2 21908642 21908758 -228779096 + CT-rich Low_complexity Low_complexity 3 117 0 722 277 75 0 chr2 21908763 21909030 -228778824 - L1MC3 LINE L1 -1213 4933 4647 180 0 0 0 chr2 21909030 21909050 -228778804 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1137 222 13 0 chr2 21909063 21909297 -228778557 - AluJb SINE Alu -43 269 33 1481 278 30 4 chr2 21909297 21909823 -228778031 - L1MC3 LINE L1 -1490 4656 4117 1238 222 27 7 chr2 21909844 21910137 -228777717 - L1MC3 LINE L1 -1999 4147 3849 718 264 19 11 chr2 21910141 21910402 -228777452 + L1MB8 LINE L1 3185 3447 -2699 1737 158 152 8 chr2 21910403 21910777 -228777077 + MSTA LTR MaLR 1 428 0 633 239 30 30 chr2 21910824 21911025 -228776829 + L1MB8 LINE L1 3636 3836 -2310 22 0 0 0 chr2 21912244 21912266 -228775588 + AT_rich Low_complexity Low_complexity 1 22 0 298 264 28 19 chr2 21912543 21912649 -228775205 - MER89-int LTR ERV1 -4454 2347 2241 38 22 0 0 chr2 21913010 21913055 -228774799 + AT_rich Low_complexity Low_complexity 1 45 0 2434 246 31 20 chr2 21913120 21913933 -228773921 + L1MB8 LINE L1 4335 5156 -990 7182 208 25 8 chr2 21913957 21915360 -228772494 + L1MA2 LINE L1 15 1441 -6124 6814 154 27 9 chr2 21915360 21917043 -228770811 + L1MA2 LINE L1 2505 4219 -3346 * 9896 159 18 14 chr2 21917040 21919974 -228767880 + L1MA2 LINE L1 4776 7723 0 2072 233 102 45 chr2 21919990 21920960 -228766894 + L1MB8 LINE L1 5150 6176 -2 3650 202 42 28 chr2 21921180 21922144 -228765710 - L1MB7 LINE L1 -21 6163 5182 1359 240 11 3 chr2 21922144 21922431 -228765423 - AluJo SINE Alu -23 289 1 3650 202 42 28 chr2 21922431 21922839 -228765015 - L1MB7 LINE L1 -1002 5182 4781 2175 112 0 3 chr2 21923140 21923435 -228764419 + AluSc SINE Alu 1 294 -15 209 270 68 0 chr2 21924638 21924712 -228763142 - MIR SINE MIR -102 160 82 258 323 21 0 chr2 21925653 21925749 -228762105 + MLT1I-int LTR MaLR 1012 1109 -262 1986 142 3 0 chr2 21926854 21927150 -228760704 + AluSx SINE Alu 1 297 -15 288 231 0 0 chr2 21927624 21927702 -228760152 + (TA)n Simple_repeat Simple_repeat 1 78 0 395 257 57 9 chr2 21928038 21928143 -228759711 - MER20 DNA MER1_type -6 213 104 237 132 0 0 chr2 21928170 21928208 -228759646 + (TA)n Simple_repeat Simple_repeat 1 38 0 280 324 27 0 chr2 21928212 21928323 -228759531 + L1MC4 LINE L1 6614 6727 -1315 235 345 36 50 chr2 21928648 21928787 -228759067 + L2 LINE L2 3177 3313 0 2095 119 6 13 chr2 21928879 21929191 -228758663 - AluY SINE Alu -1 310 1 21 36 0 0 chr2 21930184 21930212 -228757642 + AT_rich Low_complexity Low_complexity 1 28 0 268 82 20 20 chr2 21930435 21930484 -228757370 + (GA)n Simple_repeat Simple_repeat 2 50 0 393 287 154 47 chr2 21930973 21931252 -228756602 - L2 LINE L2 0 3313 3005 318 280 16 64 chr2 21931631 21931756 -228756098 + MLT1I LTR MaLR 119 237 -172 2206 125 0 0 chr2 21931901 21932212 -228755642 - AluSx SINE Alu -1 311 1 433 323 213 24 chr2 21933227 21933852 -228754002 + L2 LINE L2 1749 2491 -823 2100 127 3 0 chr2 21934034 21934334 -228753520 - AluSp SINE Alu -12 301 1 324 295 8 78 chr2 21934553 21934682 -228753172 + L2 LINE L2 2934 3053 -219 383 312 41 7 chr2 21935611 21935762 -228752092 - MIR SINE MIR -56 206 52 181 250 0 0 chr2 21936050 21936090 -228751764 - L2 LINE L2 0 3313 3274 28 48 0 0 chr2 21936666 21936708 -228751146 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr2 21937207 21937237 -228750617 + AT_rich Low_complexity Low_complexity 1 30 0 2212 68 7 23 chr2 21937748 21938055 -228749799 + AluY SINE Alu 1 302 -9 1316 191 165 45 chr2 21938436 21938818 -228749036 - MSTC LTR MaLR 0 428 1 21 36 0 0 chr2 21938923 21938951 -228748903 + AT_rich Low_complexity Low_complexity 1 28 0 323 245 88 0 chr2 21939097 21939199 -228748655 + MIR SINE MIR 151 261 -1 1744 253 90 21 chr2 21939912 21940738 -228747116 - L1M4 LINE L1 -2743 3403 2521 3639 51 32 0 chr2 21942208 21942678 -228745176 - L1PA7 LINE L1 -10 6144 5660 648 172 0 0 chr2 21942716 21942838 -228745016 + pTR5 LTR ERV1 741 862 -1576 1723 204 30 16 chr2 21942949 21943321 -228744533 + L1PB4 LINE L1 5751 6127 -29 1086 123 7 0 chr2 21943321 21943475 -228744379 + AluSx SINE Alu 1 155 -157 1549 111 0 40 chr2 21943500 21943726 -228744128 + AluSg SINE Alu 63 279 -31 234 105 0 0 chr2 21943755 21943793 -228744061 + L1PB4 LINE L1 6112 6149 -7 23 54 0 0 chr2 21945823 21945860 -228741994 + AT_rich Low_complexity Low_complexity 1 37 0 438 188 36 0 chr2 21945865 21946030 -228741824 + (TA)n Simple_repeat Simple_repeat 1 171 0 241 242 22 0 chr2 21947344 21947435 -228740419 + CT-rich Low_complexity Low_complexity 3 95 0 21 0 0 0 chr2 21948940 21948961 -228738893 + AT_rich Low_complexity Low_complexity 1 21 0 2223 97 0 0 chr2 21950415 21950704 -228737150 - AluSq SINE Alu -24 289 1 3063 313 70 17 chr2 21951005 21952285 -228735569 + L2 LINE L2 1249 2596 -718 691 276 154 6 chr2 21952285 21952919 -228734935 - L1ME LINE L1 -557 5607 4881 378 319 89 45 chr2 21953341 21953633 -228734221 + L1MB8 LINE L1 5260 5564 -2244 321 333 35 23 chr2 21953689 21953863 -228733991 - MIR SINE MIR -72 190 15 215 333 24 0 chr2 21955125 21955209 -228732645 - MIR SINE MIR -124 138 53 265 333 11 0 chr2 21955391 21955481 -228732373 + GA-rich Low_complexity Low_complexity 6 96 0 301 323 8 8 chr2 21955790 21955920 -228731934 - L1ME LINE L1 -469 5652 5523 351 0 0 0 chr2 21955929 21955968 -228731886 + (TA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 21956066 21956094 -228731760 + AT_rich Low_complexity Low_complexity 1 28 0 23 78 0 0 chr2 21956192 21956243 -228731611 + AT_rich Low_complexity Low_complexity 1 51 0 253 245 116 19 chr2 21956244 21956399 -228731455 - MER69 DNA AcHobo -167 2359 2190 813 221 11 16 chr2 21956466 21956656 -228731198 + L1MB8 LINE L1 5988 6176 -2 2232 105 0 3 chr2 21956669 21956975 -228730879 + AluSx SINE Alu 1 305 -7 529 233 63 11 chr2 21956985 21957174 -228730680 - MER69 DNA AcHobo -327 2199 2001 415 304 15 0 chr2 21957221 21957356 -228730498 - MER69 DNA AcHobo -1899 627 491 4683 177 40 20 chr2 21957384 21957433 -228730421 - L1MA8 LINE L1 -10 6281 6234 1591 213 18 6 chr2 21957433 21957771 -228730083 + MER2 DNA MER2_type 1 342 -2 4683 177 40 20 chr2 21957771 21958889 -228728965 - L1MA8 LINE L1 -57 6234 5088 604 184 86 0 chr2 21958925 21959047 -228728807 - L1MA8 LINE L1 -1616 4530 4391 390 21 0 0 chr2 21959047 21959094 -228728760 + (TG)n Simple_repeat Simple_repeat 2 48 0 604 184 86 0 chr2 21959094 21959123 -228728731 - L1MA8 LINE L1 -1755 4391 4366 2694 177 29 89 chr2 21959127 21959827 -228728027 - L1 LINE L1 -1065 5263 4606 3380 177 75 18 chr2 21959900 21960787 -228727067 - L1 LINE L1 -2400 3928 2991 1243 166 136 58 chr2 21960814 21961292 -228726562 - MER4A LTR ERV1 -19 446 1 1035 229 12 8 chr2 21961292 21961536 -228726318 - L1 LINE L1 -3342 2986 2742 * 1784 262 35 12 chr2 21961530 21962105 -228725749 - L1 LINE L1 -4604 1724 1133 3982 165 31 3 chr2 21962105 21962819 -228725035 - MER50 LTR ERV1 0 734 1 1784 262 35 12 chr2 21962819 21962835 -228725019 - L1 LINE L1 -5195 1133 1119 2346 130 23 8 chr2 21962835 21963188 -228724666 - MER50-int LTR ERV1 -24 7181 6824 604 137 0 21 chr2 21963173 21963268 -228724586 - MER50-int LTR ERV1 -1010 6195 6103 * 3096 128 51 12 chr2 21963269 21963819 -228724035 - MER50-int LTR ERV1 -812 4068 3391 2893 155 6 12 chr2 21963819 21964303 -228723551 - MER50-int LTR ERV1 -3398 1482 1002 5843 149 53 12 chr2 21964321 21966024 -228721830 - MER50-int LTR ERV1 -5351 1854 1 3916 151 29 19 chr2 21966073 21966770 -228721084 - MER50 LTR ERV1 -30 704 1 606 229 23 0 chr2 21966806 21966997 -228720857 - L1 LINE L1 -4240 1088 939 235 97 90 15 chr2 21967001 21967135 -228720719 + (TA)n Simple_repeat Simple_repeat 1 144 0 1280 291 111 38 chr2 21967251 21968026 -228719828 + L1ME2 LINE L1 1177 1894 -4321 1494 207 29 0 chr2 21968026 21968301 -228719553 + AluJo SINE Alu 3 285 -27 1280 291 111 38 chr2 21968301 21969105 -228718749 + L1ME2 LINE L1 1894 2893 -3322 2304 85 3 7 chr2 21969105 21969412 -228718442 - AluY SINE Alu -5 306 1 1280 291 111 38 chr2 21969412 21969699 -228718155 + L1ME2 LINE L1 2893 3158 -3057 216 0 0 0 chr2 21969964 21969988 -228717866 + (TA)n Simple_repeat Simple_repeat 2 25 0 2330 70 20 3 chr2 21969988 21970290 -228717564 - AluSp SINE Alu -6 307 1 1045 279 66 51 chr2 21970421 21971069 -228716785 + L1ME2 LINE L1 3622 4279 -1936 261 289 61 87 chr2 21971074 21971426 -228716428 + L1ME2 LINE L1 4881 5220 -995 1992 136 3 10 chr2 21971426 21971727 -228716127 + AluSp SINE Alu 4 302 -11 261 289 61 87 chr2 21971727 21971835 -228716019 + L1ME2 LINE L1 5220 5329 -886 887 244 31 4 chr2 21971922 21972176 -228715678 + L1ME2 LINE L1 5359 5619 -614 431 223 39 0 chr2 21972248 21972351 -228715503 + L1ME2 LINE L1 5811 5917 -318 557 222 81 9 chr2 21972353 21972574 -228715280 - L1M4 LINE L1 -777 5369 5133 918 254 30 27 chr2 21972599 21972898 -228714956 + L1ME2 LINE L1 5925 6224 -9 2504 181 33 6 chr2 21973101 21973583 -228714271 + Tigger2 DNA MER2_type 1 495 -2223 3824 170 48 19 chr2 21973585 21974420 -228713434 - L1M4 LINE L1 -1156 4990 4132 231 373 37 15 chr2 21974468 21974602 -228713252 - MIR3 SINE MIR -28 180 44 * 1444 263 46 151 chr2 21974600 21975045 -228712809 - L2 LINE L2 -502 2812 2400 403 188 134 0 chr2 21975045 21975157 -228712697 - L1M4 LINE L1 -685 5499 5373 1444 263 46 151 chr2 21975157 21975573 -228712281 - L2 LINE L2 -914 2400 1942 28 0 0 0 chr2 21975815 21975843 -228712011 + AT_rich Low_complexity Low_complexity 1 28 0 3337 228 62 27 chr2 21975934 21977709 -228710145 - L1MB7 LINE L1 -21 6163 4322 303 28 0 0 chr2 21978466 21978502 -228709352 + (TG)n Simple_repeat Simple_repeat 1 36 0 207 309 37 8 chr2 21979515 21979675 -228708179 - MIR SINE MIR -46 216 31 2203 115 0 7 chr2 21980210 21980515 -228707339 - AluSg SINE Alu -7 303 1 1812 248 82 7 chr2 21980530 21981157 -228706697 + L1MB4 LINE L1 4836 5414 -766 195 100 0 0 chr2 21981157 21981187 -228706667 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1812 248 82 7 chr2 21981187 21981798 -228706056 + L1MB4 LINE L1 5414 6178 -2 22 35 0 0 chr2 21982472 21982501 -228705353 + AT_rich Low_complexity Low_complexity 1 29 0 1339 92 0 66 chr2 21983090 21983318 -228704536 + AluY SINE Alu 99 311 0 201 74 0 0 chr2 21983358 21983385 -228704469 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 855 131 0 0 chr2 21983448 21983585 -228704269 + (TCCC)n Simple_repeat Simple_repeat 3 139 0 222 118 0 0 chr2 21983648 21983682 -228704172 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1690 278 112 3 chr2 21983780 21984528 -228703326 - L1MB7 LINE L1 -1985 4161 3332 3326 253 66 9 chr2 21984535 21985152 -228702702 - L1MC3 LINE L1 -7 7778 7081 2114 142 31 19 chr2 21985152 21985512 -228702342 + THE1B LTR MaLR 1 364 0 3326 253 66 9 chr2 21985512 21985889 -228701965 - L1MC3 LINE L1 -704 7081 6727 675 301 69 19 chr2 21985927 21986346 -228701508 - L1MEc LINE L1 -4258 2138 1699 1446 214 55 16 chr2 21986387 21986751 -228701103 - L1M4 LINE L1 -540 5703 5326 21 0 0 0 chr2 21986779 21986800 -228701054 + AT_rich Low_complexity Low_complexity 1 21 0 1768 295 67 40 chr2 21986803 21988316 -228699538 - L1MEc LINE L1 -4814 1401 45 2002 140 44 16 chr2 21988318 21988683 -228699171 - THE1C LTR MaLR 0 375 1 1812 177 51 24 chr2 21988817 21989300 -228698554 + MLT2A2 LTR ERVL 1 500 -54 248 207 98 0 chr2 21989378 21989460 -228698394 + L1MC4 LINE L1 6614 6703 -1339 198 209 0 0 chr2 21989465 21989508 -228698346 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 229 250 71 0 chr2 21989508 21989592 -228698262 + L1MC4 LINE L1 6614 6703 -1339 788 212 8 8 chr2 21989592 21989847 -228698007 + (TATATG)n Simple_repeat Simple_repeat 1 255 0 235 247 26 0 chr2 21989847 21989924 -228697930 + L1MCa LINE L1 2006 2084 -4342 182 0 105 0 chr2 21989960 21989998 -228697856 + (TA)n Simple_repeat Simple_repeat 1 42 0 1015 258 106 58 chr2 21990005 21990635 -228697219 - L1ME LINE L1 -439 5723 5071 1690 228 24 40 chr2 21990660 21991093 -228696761 - MLT2B2 LTR ERVL 0 397 1 1128 285 136 36 chr2 21991116 21991216 -228696638 - L1ME LINE L1 -1156 4990 4901 2347 73 0 55 chr2 21991216 21991543 -228696311 - AluSc SINE Alu 0 309 1 1128 285 136 36 chr2 21991543 21992462 -228695392 - L1ME LINE L1 -1245 4901 3869 21 0 0 0 chr2 21992590 21992611 -228695243 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 21993195 21993218 -228694636 + AT_rich Low_complexity Low_complexity 1 23 0 2039 170 62 79 chr2 21993690 21994237 -228693617 - L1MA10 LINE L1 -8 6326 5789 3095 104 143 138 chr2 21994975 21996269 -228691585 + pTR5 LTR ERV1 827 2438 0 499 203 262 0 chr2 21997791 21997858 -228689996 - MER46A DNA MER2_type -2495 236 188 1585 151 12 12 chr2 21997858 21998116 -228689738 + AluSx SINE Alu 44 301 -11 499 203 262 0 chr2 21998116 21998235 -228689619 - MER46A DNA MER2_type -2543 188 1 23 33 0 0 chr2 21999277 21999307 -228688547 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 21999492 21999515 -228688339 + AT_rich Low_complexity Low_complexity 1 23 0 1973 128 67 20 chr2 22000702 22001060 -228686794 + THE1C LTR MaLR 1 375 0 264 391 106 21 chr2 22001230 22001949 -228685905 + L2 LINE L2 854 1633 -1681 297 291 44 50 chr2 22002344 22002526 -228685328 + L2 LINE L2 1978 2158 -1156 637 209 6 55 chr2 22003714 22003850 -228684004 - AluJo/FRAM SINE Alu -8 294 166 2033 70 4 33 chr2 22003850 22004121 -228683733 + AluY SINE Alu 34 296 -15 637 209 6 55 chr2 22004121 22004147 -228683707 - AluJo/FRAM SINE Alu -136 166 140 278 180 16 0 chr2 22004162 22004223 -228683631 + (TA)n Simple_repeat Simple_repeat 2 63 0 297 0 0 0 chr2 22004226 22004259 -228683595 + (CA)n Simple_repeat Simple_repeat 2 34 0 399 326 49 33 chr2 22004871 22005055 -228682799 + L3 LINE CR1 922 1108 -469 27 29 0 0 chr2 22005541 22005575 -228682279 + AT_rich Low_complexity Low_complexity 1 34 0 291 175 0 0 chr2 22005855 22005912 -228681942 + (TATG)n Simple_repeat Simple_repeat 3 59 0 26 30 0 0 chr2 22006318 22006351 -228681503 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr2 22006828 22006878 -228680976 + AT_rich Low_complexity Low_complexity 1 50 0 243 0 0 0 chr2 22008518 22008545 -228679309 + (TC)n Simple_repeat Simple_repeat 2 28 0 345 47 0 0 chr2 22008559 22008602 -228679252 + (GA)n Simple_repeat Simple_repeat 1 43 0 336 24 0 0 chr2 22009471 22009512 -228678342 + (CA)n Simple_repeat Simple_repeat 1 41 0 614 385 64 19 chr2 22009986 22010469 -228677385 + L3 LINE CR1 1071 1575 -2 22 35 0 0 chr2 22010551 22010580 -228677274 + AT_rich Low_complexity Low_complexity 1 29 0 745 296 39 35 chr2 22010798 22011109 -228676745 + ERVL LTR ERVL 1101 1412 -3584 333 250 0 38 chr2 22011349 22011429 -228676425 + ERVL LTR ERVL 1756 1832 -3164 471 204 102 12 chr2 22011449 22011616 -228676238 + MER53 DNA DNA 8 189 0 524 338 75 24 chr2 22011619 22011912 -228675942 + ERVL LTR ERVL 1968 2275 -2721 2017 266 64 26 chr2 22011913 22012705 -228675149 + L1MB5 LINE L1 4017 4838 -1308 1754 185 37 87 chr2 22012705 22012800 -228675054 + MLT1C LTR MaLR 1 99 -368 1819 181 44 16 chr2 22012800 22013165 -228674689 - THE1C LTR MaLR 0 375 1 1754 185 37 87 chr2 22013165 22013561 -228674293 + MLT1C LTR MaLR 99 467 0 3605 217 80 3 chr2 22013561 22014782 -228673072 + L1MB5 LINE L1 4834 6157 -17 24 53 0 0 chr2 22014785 22014823 -228673031 + AT_rich Low_complexity Low_complexity 1 38 0 2220 326 16 6 chr2 22014823 22015685 -228672169 + ERVL LTR ERVL 2285 2986 -2010 732 326 42 43 chr2 22015694 22016311 -228671543 + ERVL LTR ERVL 3131 3535 -1461 671 336 59 23 chr2 22016450 22016844 -228671010 + ERVL LTR ERVL 4039 4481 -1283 498 315 14 18 chr2 22016955 22017174 -228670680 + ERVL LTR ERVL 4665 4882 -603 684 333 35 31 chr2 22017315 22017771 -228670083 + ERVL LTR ERVL 4887 5344 -310 366 325 73 7 chr2 22017891 22018042 -228669812 + LTR16B LTR ERVL 1 161 -303 240 333 75 0 chr2 22018284 22018377 -228669477 + L1MC4a LINE L1 5486 5585 -579 332 300 100 33 chr2 22019295 22019505 -228668349 + L1MC4a LINE L1 5676 5899 -1909 307 128 0 0 chr2 22019510 22019557 -228668297 - MADE1 DNA Mariner 0 80 34 4891 171 38 10 chr2 22019755 22020762 -228667092 - L1MA8 LINE L1 -17 6274 5231 640 226 75 44 chr2 22020763 22020922 -228666932 + FRAM SINE Alu 1 164 -12 5051 191 36 25 chr2 22020922 22021752 -228666102 - L1MA8 LINE L1 -909 5237 4388 189 0 0 0 chr2 22021752 22021773 -228666081 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 5051 191 36 25 chr2 22021773 22022150 -228665704 - L1MA8 LINE L1 -1758 4388 4017 1955 123 67 58 chr2 22022150 22022580 -228665274 + L1MA4 LINE L1 5866 6299 -1 1318 206 88 31 chr2 22022580 22023056 -228664798 + L1 LINE L1 3041 3543 -2603 1447 147 16 0 chr2 22073056 22073308 -228614546 + MER44D DNA MER2_type 294 604 -1 22 80 0 0 chr2 22073410 22073460 -228614394 + AT_rich Low_complexity Low_complexity 1 50 0 525 253 91 97 chr2 22073467 22073985 -228613869 + MLT1H LTR MaLR 8 522 -27 206 238 60 24 chr2 22074052 22074136 -228613718 - MIR SINE MIR -56 206 120 375 304 27 40 chr2 22074366 22074486 -228613368 - MER102b DNA MER1_type -1090 338 221 2400 94 3 0 chr2 22074486 22074795 -228613059 + AluSp SINE Alu 3 312 -1 375 304 27 40 chr2 22074795 22074898 -228612956 - MER102b DNA MER1_type -1207 221 118 847 161 7 0 chr2 22075030 22075167 -228612687 + FLAM_C SINE Alu 1 138 -5 2173 131 3 0 chr2 22076928 22077233 -228610621 + AluSg SINE Alu 1 306 -4 213 175 0 0 chr2 22077600 22077640 -228610214 + (TG)n Simple_repeat Simple_repeat 1 40 0 232 136 121 0 chr2 22078374 22078440 -228609414 - L1MA7 LINE L1 -2 6289 6216 593 218 8 8 chr2 22078655 22078779 -228609075 - L2 LINE L2 0 3313 3190 1417 204 33 41 chr2 22078907 22079275 -228608579 + MLT1A1 LTR MaLR 1 365 0 257 323 123 13 chr2 22079384 22079539 -228608315 + MIR SINE MIR 50 221 -41 471 248 99 8 chr2 22079916 22080037 -228607817 + L2 LINE L2 3137 3268 -4 2185 147 0 0 chr2 22080274 22080586 -228607268 - AluSx SINE Alu 0 312 1 256 312 0 65 chr2 22081569 22081662 -228606192 - L2 LINE L2 -2 3311 3225 363 44 0 0 chr2 22081858 22081903 -228605951 + (TG)n Simple_repeat Simple_repeat 1 45 0 294 106 0 0 chr2 22081903 22081950 -228605904 + (GA)n Simple_repeat Simple_repeat 2 48 0 235 271 29 0 chr2 22082506 22082576 -228605278 + L1ME3 LINE L1 6062 6133 -29 2049 140 0 0 chr2 22083440 22083726 -228604128 + AluSx SINE Alu 3 288 -24 334 321 54 45 chr2 22085489 22085713 -228602141 + MIR SINE MIR 28 253 -9 327 333 145 0 chr2 22085759 22085876 -228601978 - L2 LINE L2 -2 3270 3137 2192 116 3 0 chr2 22086196 22086490 -228601364 + AluSg SINE Alu 1 295 -15 281 252 134 42 chr2 22086633 22086752 -228601102 - MIR3 SINE MIR -78 130 1 403 274 94 33 chr2 22086795 22087007 -228600847 - MIR SINE MIR -2 260 36 189 381 103 0 chr2 22087484 22087581 -228600273 + L2 LINE L2 2945 3051 -221 567 280 111 69 chr2 22088266 22088645 -228599209 - L2 LINE L2 -4 3309 2915 208 299 68 41 chr2 22089152 22089299 -228598555 - L2 LINE L2 0 3313 3163 1128 164 38 0 chr2 22089481 22089694 -228598160 + Tigger2 DNA MER2_type 2498 2718 0 1323 245 33 27 chr2 22089742 22090110 -228597744 + MLT1A2 LTR MaLR 5 374 0 184 77 51 0 chr2 22093312 22093351 -228594503 + A-rich Low_complexity Low_complexity 2 42 0 375 202 25 17 chr2 22096452 22096571 -228591283 + GA-rich Low_complexity Low_complexity 4 123 0 410 285 23 23 chr2 22096786 22097000 -228590854 - L1MEd LINE L1 -4923 1196 983 4092 148 73 14 chr2 22097062 22097844 -228590010 - L1PA16 LINE L1 0 6166 5339 2092 115 7 0 chr2 22097844 22098139 -228589715 + AluSc SINE Alu 1 297 -12 427 91 39 0 chr2 22098139 22098216 -228589638 + GA-rich Low_complexity Low_complexity 4 83 0 507 129 63 12 chr2 22098227 22098362 -228589492 - L1 LINE L1 -795 5351 5211 1734 181 122 13 chr2 22098467 22098853 -228589001 + MSTA LTR MaLR 1 428 0 2454 71 0 0 chr2 22099076 22099372 -228588482 + AluY SINE Alu 1 296 -15 511 345 112 32 chr2 22100110 22100530 -228587324 - HAL1 LINE L1 -741 1766 1300 2471 118 39 15 chr2 22100530 22100919 -228586935 - MER48 LTR ERV1 0 398 1 511 345 112 32 chr2 22100919 22100991 -228586863 - HAL1 LINE L1 -1207 1300 1235 480 292 52 77 chr2 22100996 22101492 -228586362 - L1MEd LINE L1 -5013 1106 623 380 276 84 61 chr2 22101798 22102012 -228585842 - L1MEd LINE L1 -5890 229 11 23 0 0 0 chr2 22102597 22102620 -228585234 + AT_rich Low_complexity Low_complexity 1 23 0 747 251 18 44 chr2 22103243 22103470 -228584384 + MER58A DNA MER1_type 3 223 -1 896 290 77 8 chr2 22103592 22103954 -228583900 + MLT1I LTR MaLR 1 387 -22 452 296 103 14 chr2 22104633 22105129 -228582725 + L1ME4a LINE L1 5526 6065 -56 204 283 35 9 chr2 22105222 22105335 -228582519 + (TA)n Simple_repeat Simple_repeat 2 117 0 5050 114 2 14 chr2 22105464 22106261 -228581593 - L1PA15 LINE L1 -9 6156 5369 27 96 0 0 chr2 22106427 22106510 -228581344 + AT_rich Low_complexity Low_complexity 1 83 0 1048 211 13 50 chr2 22106511 22106814 -228581040 - L1MA10 LINE L1 -13 6321 6030 186 300 0 0 chr2 22106815 22106865 -228580989 + L2 LINE L2 2709 2758 -556 438 236 0 9 chr2 22107060 22107166 -228580688 - L1PB4 LINE L1 -26 6130 6026 272 264 69 19 chr2 22107851 22108010 -228579844 - L1ME LINE L1 -349 5772 5606 25 31 0 0 chr2 22109323 22109355 -228578499 + AT_rich Low_complexity Low_complexity 1 32 0 32 26 0 0 chr2 22109900 22109939 -228577915 + AT_rich Low_complexity Low_complexity 1 39 0 639 243 88 4 chr2 22110018 22110244 -228577610 - LTR37B LTR ERV1 0 468 224 1981 114 57 4 chr2 22110475 22110756 -228577098 + AluSx SINE Alu 1 296 -16 225 274 0 20 chr2 22110986 22111037 -228576817 - L2 LINE L2 -6 3266 3217 1969 135 4 0 chr2 22112103 22112384 -228575470 + AluSx SINE Alu 14 295 -17 189 348 128 68 chr2 22112900 22113150 -228574704 - L2 LINE L2 -82 3190 2926 1837 190 19 27 chr2 22115306 22115674 -228572180 + MLT1A1 LTR MaLR 1 365 0 295 211 29 115 chr2 22115735 22115839 -228572015 - MLT1H LTR MaLR 0 549 455 387 0 0 0 chr2 22116653 22116696 -228571158 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 297 0 0 0 chr2 22116698 22116731 -228571123 + (TG)n Simple_repeat Simple_repeat 2 34 0 277 208 0 0 chr2 22118417 22118465 -228569389 - L2 LINE L2 -4 3309 3262 233 130 43 0 chr2 22118956 22119002 -228568852 + CT-rich Low_complexity Low_complexity 3 50 0 2862 234 71 23 chr2 22120578 22121286 -228566568 - MER21B LTR ERV1 -105 758 17 1848 85 19 4 chr2 22121470 22121728 -228566126 + L1PA14 LINE L1 5900 6161 0 * 10371 32 1 10 chr2 22121726 22123746 -228564108 + L1PA4 LINE L1 4143 6155 0 1914 142 92 19 chr2 22123749 22124109 -228563745 + LTR49 LTR ERV1 134 519 -76 21 0 0 0 chr2 22124416 22124437 -228563417 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 22124534 22124559 -228563295 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 22124838 22124866 -228562988 + (A)n Simple_repeat Simple_repeat 1 28 0 869 183 52 92 chr2 22125216 22125445 -228562409 + Tigger5 DNA MER2_type 1 220 -2103 * 1729 138 4 0 chr2 22125437 22125705 -228562149 + Tigger5 DNA MER2_type 2054 2322 -1 445 321 144 23 chr2 22126819 22127255 -228560599 - L1MEd LINE L1 -2563 3566 3078 361 245 172 81 chr2 22127256 22127517 -228560337 + MLT1E2 LTR MaLR 1 285 -341 581 286 104 58 chr2 22127859 22128447 -228559407 - L1MEd LINE L1 -5041 1078 464 2228 114 0 16 chr2 22128796 22129104 -228558750 - AluSg SINE Alu -7 303 1 458 317 35 15 chr2 22129135 22129334 -228558520 + L2 LINE L2 3111 3313 0 244 298 36 0 chr2 22129340 22129424 -228558430 + (CATA)n Simple_repeat Simple_repeat 2 88 0 286 284 162 27 chr2 22130003 22130151 -228557703 + MIR3 SINE MIR 31 198 -10 471 259 6 29 chr2 22130731 22130901 -228556953 + L1M4 LINE L1 3272 3437 -2709 201 369 36 18 chr2 22131505 22131616 -228556238 + MIR SINE MIR 4 116 -146 234 81 0 0 chr2 22131675 22131712 -228556142 + (TA)n Simple_repeat Simple_repeat 1 37 0 3537 175 46 23 chr2 22132431 22133432 -228554422 - L1MA7 LINE L1 -258 6033 5013 802 268 49 25 chr2 22133446 22133689 -228554165 - MIR SINE MIR -8 254 6 7025 61 27 0 chr2 22133904 22134932 -228552922 - L1PA8 LINE L1 -1 6171 5139 233 377 23 23 chr2 22134973 22135103 -228552751 - MIR SINE MIR -126 136 7 627 354 93 42 chr2 22136440 22137293 -228550561 - L2 LINE L2 -457 2857 1962 338 204 11 0 chr2 22137390 22137483 -228550371 + GA-rich Low_complexity Low_complexity 6 99 0 3397 195 43 65 chr2 22138490 22139400 -228548454 - L1MC1 LINE L1 0 7764 6137 26 50 0 0 chr2 22139507 22139547 -228548307 + AT_rich Low_complexity Low_complexity 1 40 0 1431 36 6 10 chr2 22139655 22139904 -228547950 + L1PA3 LINE L1 5955 6176 0 704 344 126 44 chr2 22140140 22141130 -228546724 + L1ME LINE L1 3 1073 -5046 927 265 57 43 chr2 22141209 22141833 -228546021 + L1ME3A LINE L1 5144 5777 -393 399 274 22 34 chr2 22141860 22142039 -228545815 + L1ME3A LINE L1 5851 6028 -135 478 309 91 17 chr2 22142055 22142405 -228545449 + L1ME LINE L1 4357 4732 -1397 229 263 124 21 chr2 22142512 22142706 -228545148 + L1ME LINE L1 4911 5124 -1005 575 272 138 19 chr2 22142966 22143286 -228544568 + L1ME LINE L1 5419 5776 -369 279 212 0 0 chr2 22143984 22144050 -228543804 + MER116 DNA Mariner 6 71 -9 580 235 37 27 chr2 22145133 22145428 -228542426 - MLT1I LTR MaLR -17 392 79 21 36 0 0 chr2 22147263 22147291 -228540563 + AT_rich Low_complexity Low_complexity 1 28 0 2514 71 3 0 chr2 22148712 22149022 -228538832 - AluY SINE Alu 0 311 1 26 30 0 0 chr2 22149416 22149449 -228538405 + AT_rich Low_complexity Low_complexity 1 33 0 458 310 32 7 chr2 22151851 22152006 -228535848 + MIR SINE MIR 50 208 -54 26 64 0 0 chr2 22152504 22152551 -228535303 + AT_rich Low_complexity Low_complexity 1 47 0 270 365 78 9 chr2 22153087 22153202 -228534652 - L2 LINE L2 -21 3251 3129 381 324 45 80 chr2 22154427 22154804 -228533050 - L2 LINE L2 -824 2490 2127 1719 248 68 7 chr2 22155851 22156307 -228531547 - MER119 DNA MER1_type -99 484 1 396 179 0 0 chr2 22156608 22156686 -228531168 + (TA)n Simple_repeat Simple_repeat 1 78 0 186 314 119 17 chr2 22156925 22157043 -228530811 + MIR3 SINE MIR 13 142 -66 183 42 0 0 chr2 22157350 22157374 -228530480 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1645 186 25 35 chr2 22157621 22158025 -228529829 - L1MA7 LINE L1 -7 6284 5885 2058 200 59 15 chr2 22159788 22160032 -228527822 + LOR1a LTR ERV1 1 233 -264 1843 133 0 0 chr2 22160032 22160296 -228527558 - AluSx SINE Alu -14 298 35 2058 200 59 15 chr2 22160296 22160527 -228527327 + LOR1a LTR ERV1 233 497 0 1135 203 7 27 chr2 22161706 22162002 -228525852 - L1MA4 LINE L1 0 6300 6011 305 336 28 9 chr2 22163653 22163760 -228524094 + MER5A DNA MER1_type 36 144 -45 408 288 18 59 chr2 22164638 22164808 -228523046 - L2 LINE L2 -4 3309 3147 * 466 283 131 5 chr2 22164806 22165004 -228522850 + MIR SINE MIR 34 256 -6 215 254 17 0 chr2 22165105 22165164 -228522690 + (CATA)n Simple_repeat Simple_repeat 2 61 0 180 111 0 0 chr2 22165178 22165205 -228522649 + (TA)n Simple_repeat Simple_repeat 1 27 0 195 188 0 0 chr2 22165216 22165264 -228522590 + (CATA)n Simple_repeat Simple_repeat 2 49 0 22 35 0 0 chr2 22165878 22165907 -228521947 + AT_rich Low_complexity Low_complexity 1 29 0 204 350 86 8 chr2 22166173 22166290 -228521564 - L2 LINE L2 -1 3271 3146 207 167 0 0 chr2 22167284 22167320 -228520534 + CT-rich Low_complexity Low_complexity 1 36 0 356 240 21 10 chr2 22167433 22167529 -228520325 - MER110 LTR ERV1 -2 489 393 2070 217 43 33 chr2 22167645 22168129 -228519725 - L1MA9 LINE L1 -38 6274 5781 347 0 23 0 chr2 22168129 22168172 -228519682 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 2070 217 43 33 chr2 22168172 22168345 -228519509 - L1MA9 LINE L1 -531 5781 5611 258 250 0 0 chr2 22169027 22169083 -228518771 + MIR SINE MIR 180 235 -27 180 152 0 0 chr2 22169085 22169118 -228518736 + (TAA)n Simple_repeat Simple_repeat 2 34 0 181 309 25 49 chr2 22169127 22169208 -228518646 - L2 LINE L2 -650 2664 2586 366 148 34 45 chr2 22169361 22169449 -228518405 + MER5A DNA MER1_type 26 112 -77 199 206 294 11 chr2 22169383 22169475 -228518379 - MER5A DNA MER1_type -32 157 40 * 226 173 0 0 chr2 22169732 22169784 -228518070 + L1MC4 LINE L1 6652 6703 -1339 279 0 0 0 chr2 22171988 22172019 -228515835 + (CA)n Simple_repeat Simple_repeat 2 32 0 33 73 0 0 chr2 22172019 22172087 -228515767 + AT_rich Low_complexity Low_complexity 1 68 0 198 0 0 0 chr2 22172093 22172115 -228515739 + (TA)n Simple_repeat Simple_repeat 1 22 0 192 328 40 80 chr2 22172147 22172272 -228515582 - MER5A DNA MER1_type -68 121 2 417 394 20 5 chr2 22172418 22172621 -228515233 + MIR SINE MIR 2 207 -55 24 53 0 0 chr2 22173320 22173358 -228514496 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 22173766 22173789 -228514065 + AT_rich Low_complexity Low_complexity 1 23 0 1932 108 0 0 chr2 22174853 22175104 -228512750 + AluSq SINE Alu 1 251 -62 453 316 88 10 chr2 22175332 22175525 -228512329 + MIR SINE MIR 31 238 -24 193 215 13 13 chr2 22175657 22175736 -228512118 + (TTTA)n Simple_repeat Simple_repeat 4 82 0 283 136 0 0 chr2 22175830 22175874 -228511980 + L2 LINE L2 3269 3312 -1 183 42 0 0 chr2 22176268 22176292 -228511562 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1383 152 67 41 chr2 22176295 22176565 -228511289 - AluSg SINE Alu -33 277 1 31 0 0 0 chr2 22177010 22177041 -228510813 + AT_rich Low_complexity Low_complexity 1 31 0 896 128 156 0 chr2 22177041 22177221 -228510633 - L1MA2 LINE L1 -2 6302 6095 2337 91 0 0 chr2 22177431 22177718 -228510136 + AluSg SINE Alu 1 287 -23 243 0 0 0 chr2 22177719 22177746 -228510108 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 633 338 123 41 chr2 22177769 22177979 -228509875 + L2 LINE L2 2134 2325 -989 2186 136 0 0 chr2 22177979 22178289 -228509565 + AluSx SINE Alu 1 310 -2 633 338 123 41 chr2 22178289 22178768 -228509086 + L2 LINE L2 2325 2880 -434 1063 289 73 24 chr2 22178892 22179526 -228508328 - HAL1 LINE L1 -162 2345 1681 1836 235 21 14 chr2 22179560 22180071 -228507783 - MER90 LTR ERV1 -99 515 1 375 290 115 68 chr2 22180078 22181187 -228506667 - HAL1 LINE L1 -1245 1262 101 201 330 134 50 chr2 22181294 22181396 -228506458 + L3 LINE CR1 238 330 -1247 2202 111 0 26 chr2 22181396 22181703 -228506151 + AluSq SINE Alu 1 299 -14 2182 98 0 29 chr2 22181703 22182009 -228505845 + AluY SINE Alu 1 297 -14 201 330 134 50 chr2 22182009 22182144 -228505710 + L3 LINE CR1 329 496 -1081 351 315 123 19 chr2 22182151 22182313 -228505541 + MIR SINE MIR 12 190 -72 750 161 8 0 chr2 22182489 22182607 -228505247 + 5S rRNA rRNA 1 119 -2 2871 22 0 0 chr2 22183655 22183971 -228503883 - AluYb8 SINE Alu -2 316 1 193 323 0 48 chr2 22186569 22186631 -228501223 - L2 LINE L2 -63 3209 3151 336 376 24 37 chr2 22186668 22186946 -228500908 + L2 LINE L2 2728 3010 -262 513 230 64 29 chr2 22187123 22187578 -228500276 + MLT1H LTR MaLR 20 590 0 449 255 127 45 chr2 22188793 22188857 -228498997 - MLT1H LTR MaLR -1 548 491 1791 166 26 10 chr2 22188857 22189164 -228498690 + AluJb SINE Alu 1 312 0 449 255 127 45 chr2 22189164 22189332 -228498522 - MLT1H LTR MaLR -58 491 320 2078 136 0 16 chr2 22189572 22189880 -228497974 - AluSx SINE Alu 0 312 10 216 345 191 0 chr2 22190094 22190204 -228497650 - MIR SINE MIR -128 134 4 515 228 53 23 chr2 22190279 22190450 -228497404 + MER104 DNA MER2_type 4 179 -1 1960 153 22 30 chr2 22191378 22191745 -228496109 + THE1B LTR MaLR 1 364 0 11651 97 4 11 chr2 22191745 22192254 -228495600 + THE1B-int LTR MaLR 1 512 -1068 2339 116 0 0 chr2 22192254 22192565 -228495289 + AluY SINE Alu 1 311 0 11651 97 4 11 chr2 22192565 22193646 -228494208 + THE1B-int LTR MaLR 512 1580 0 1958 150 19 46 chr2 22193646 22194019 -228493835 + THE1B LTR MaLR 1 363 -1 1251 96 0 0 chr2 22194965 22195131 -228492723 + AluSg/x SINE Alu 142 307 -3 252 303 35 27 chr2 22195144 22195267 -228492587 - MER5A DNA MER1_type -52 137 4 190 359 0 0 chr2 22195367 22195420 -228492434 + L2 LINE L2 3219 3271 -1 273 273 67 53 chr2 22196746 22196896 -228490958 - L2 LINE L2 -124 3189 3038 190 235 0 0 chr2 22197000 22197034 -228490820 - L2 LINE L2 -83 3189 3156 354 351 28 83 chr2 22197384 22197709 -228490145 - L2 LINE L2 0 3272 2966 322 250 54 11 chr2 22198100 22198192 -228489662 - MIR SINE MIR -128 134 39 339 344 31 12 chr2 22199846 22200006 -228487848 + MIR SINE MIR 28 190 -72 226 305 9 48 chr2 22200434 22200539 -228487315 + MIR SINE MIR 103 203 -59 354 353 74 7 chr2 22201304 22201532 -228486322 + MIR SINE MIR 21 262 0 248 0 0 30 chr2 22201537 22201570 -228486284 + (TTA)n Simple_repeat Simple_repeat 1 32 0 459 92 0 0 chr2 22201648 22201713 -228486141 + (CA)n Simple_repeat Simple_repeat 1 65 0 265 255 0 53 chr2 22202032 22202126 -228485728 + LTR33A LTR ERVL 412 500 -23 21 57 0 0 chr2 22202508 22202543 -228485311 + AT_rich Low_complexity Low_complexity 1 35 0 1992 136 3 6 chr2 22205178 22205495 -228482359 + L1PA15 LINE L1 5847 6162 -3 287 298 10 39 chr2 22205711 22205815 -228482039 + MIR SINE MIR 40 140 -122 1940 170 96 19 chr2 22205816 22206234 -228481620 - MER66A LTR ERV1 0 478 29 1765 185 3 16 chr2 22207905 22208219 -228479635 - AluJo SINE Alu -2 310 1 1691 173 83 25 chr2 22208931 22209329 -228478525 + MER66B LTR ERV1 3 423 -63 188 184 20 0 chr2 22210163 22210212 -228477642 + (TA)n Simple_repeat Simple_repeat 1 50 0 1965 150 7 78 chr2 22210852 22211265 -228476589 + MLT1B LTR MaLR 7 390 0 201 195 0 0 chr2 22212886 22212927 -228474927 + (TA)n Simple_repeat Simple_repeat 1 41 0 324 0 0 0 chr2 22214322 22214358 -228473496 + (A)n Simple_repeat Simple_repeat 1 36 0 1896 263 47 76 chr2 22217331 22218434 -228469420 - L1ME3A LINE L1 -5 6165 5119 259 224 48 109 chr2 22218584 22218731 -228469123 - MIR SINE MIR -25 237 100 364 264 8 49 chr2 22219128 22219358 -228468496 + GA-rich Low_complexity Low_complexity 1 220 0 345 284 90 15 chr2 22219358 22219492 -228468362 + MIR SINE MIR 63 206 -56 21 36 0 0 chr2 22222917 22222945 -228464909 + AT_rich Low_complexity Low_complexity 1 28 0 192 260 80 0 chr2 22223166 22223216 -228464638 - L2 LINE L2 -1 3312 3259 6074 119 61 88 chr2 22223882 22225120 -228462734 + Tigger3b DNA MER2_type 28 1231 0 1475 219 16 33 chr2 22225755 22226121 -228461733 - MLT1C LTR MaLR -52 415 56 222 299 11 58 chr2 22226870 22226957 -228460897 + MIR SINE MIR 33 115 -93 188 237 65 86 chr2 22227289 22227382 -228460472 - L2 LINE L2 -9 3304 3214 437 335 66 0 chr2 22228778 22228930 -228458924 - L2 LINE L2 0 3272 3111 226 319 104 42 chr2 22228978 22229238 -228458616 + L2 LINE L2 1807 2082 -1232 1636 122 24 32 chr2 22229359 22229606 -228458248 - AluSc SINE Alu -64 245 1 458 298 13 20 chr2 22231569 22231720 -228456134 - MIR SINE MIR -18 244 95 2283 113 0 13 chr2 22231885 22232196 -228455658 + AluSg SINE Alu 1 307 -3 321 26 0 0 chr2 22232196 22232234 -228455620 + (TA)n Simple_repeat Simple_repeat 2 39 0 419 371 84 23 chr2 22235925 22236364 -228451490 - L2 LINE L2 -338 2976 2511 186 307 51 73 chr2 22236844 22236981 -228450873 - L2 LINE L2 -635 2679 2546 892 186 101 36 chr2 22237787 22237812 -228450042 - MER33 DNA MER1_type -2318 267 245 2110 137 3 0 chr2 22237812 22238112 -228449742 + AluSx SINE Alu 1 301 -11 892 186 101 36 chr2 22238112 22238333 -228449521 - MER33 DNA MER1_type -2340 245 5 527 294 15 0 chr2 22240810 22240946 -228446908 + MIR SINE MIR 1 138 -124 924 326 98 7 chr2 22240952 22241390 -228446464 - LTR33 LTR ERVL -11 510 33 391 278 0 10 chr2 22241399 22241496 -228446358 + MIR SINE MIR 146 241 -21 941 294 37 47 chr2 22243194 22243785 -228444069 + L1ME3 LINE L1 5299 5883 -279 2252 107 7 0 chr2 22244021 22244331 -228443523 - AluSq SINE Alu -1 312 1 206 237 13 0 chr2 22244384 22244460 -228443394 + (TA)n Simple_repeat Simple_repeat 1 77 0 25 0 0 0 chr2 22244480 22244505 -228443349 + AT_rich Low_complexity Low_complexity 1 25 0 1588 295 86 69 chr2 22244697 22246169 -228441685 + L2 LINE L2 1815 3313 0 24 53 0 0 chr2 22246278 22246316 -228441538 + AT_rich Low_complexity Low_complexity 1 38 0 3272 95 12 12 chr2 22247073 22247555 -228440299 - L1PB1 LINE L1 -7 6144 5663 189 0 0 0 chr2 22247790 22247811 -228440043 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 256 337 84 32 chr2 22247829 22248019 -228439835 + L2 LINE L2 3001 3200 -113 39 0 0 0 chr2 22250008 22250047 -228437807 + AT_rich Low_complexity Low_complexity 1 39 0 362 329 57 35 chr2 22250052 22250280 -228437574 + L1ME LINE L1 4631 4863 -1283 8982 215 24 8 chr2 22251055 22253182 -228434672 + L1 LINE L1 3143 5305 -841 31 0 0 0 chr2 22254514 22254545 -228433309 + AT_rich Low_complexity Low_complexity 1 31 0 229 319 70 57 chr2 22254764 22254921 -228432933 - L2 LINE L2 -244 3028 2870 22 0 0 0 chr2 22256649 22256671 -228431183 + AT_rich Low_complexity Low_complexity 1 22 0 278 208 69 0 chr2 22257168 22257240 -228430614 + MER103 DNA DNA 2 78 -88 1822 179 7 10 chr2 22257334 22257635 -228430219 + AluJb SINE Alu 2 301 -11 321 258 21 108 chr2 22257754 22257848 -228430006 - MIR SINE MIR -7 255 185 2232 94 3 16 chr2 22257848 22258155 -228429699 - AluSx SINE Alu -8 304 2 321 258 21 108 chr2 22258155 22258254 -228429600 - MIR SINE MIR -77 185 79 331 324 15 15 chr2 22258448 22258584 -228429270 + HAL1 LINE L1 1642 1777 -730 221 321 12 0 chr2 22261109 22261190 -228426664 + GA-rich Low_complexity Low_complexity 2 83 0 22 0 0 0 chr2 22261371 22261393 -228426461 + AT_rich Low_complexity Low_complexity 1 22 0 533 259 71 57 chr2 22262643 22263085 -228424769 + L1ME LINE L1 5316 5776 -345 251 350 82 0 chr2 22263533 22263630 -228424224 + MIR3 SINE MIR 95 199 -9 406 279 23 0 chr2 22263968 22264097 -228423757 + MER94 DNA DNA 3 134 0 381 211 179 0 chr2 22264462 22264557 -228423297 + MER81 DNA DNA 3 114 0 1890 164 26 26 chr2 22264666 22265056 -228422798 + MLT1B LTR MaLR 1 390 0 286 292 0 0 chr2 22266168 22266233 -228421621 + L2 LINE L2 3208 3272 0 641 332 122 11 chr2 22267219 22267589 -228420265 - MLT1J LTR MaLR -1 510 100 285 285 73 3 chr2 22267944 22268062 -228419792 + MIR SINE MIR 30 154 -63 330 275 101 18 chr2 22268077 22268186 -228419668 - L2 LINE L2 0 3272 3155 1936 168 10 23 chr2 22268594 22268897 -228418957 + AluJb SINE Alu 1 299 -13 4092 152 11 45 chr2 22268897 22269746 -228418108 + L1MA4 LINE L1 5481 6300 0 22 0 0 0 chr2 22271279 22271301 -228416553 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 22273370 22273398 -228414456 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 22273521 22273552 -228414302 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 22273873 22273897 -228413957 + AT_rich Low_complexity Low_complexity 1 24 0 254 150 0 17 chr2 22274192 22274252 -228413602 + (TG)n Simple_repeat Simple_repeat 2 60 0 844 293 45 45 chr2 22275174 22275532 -228412322 - L2 LINE L2 0 3313 2956 2068 129 7 26 chr2 22275606 22275909 -228411945 + AluSg SINE Alu 1 297 -13 331 274 24 0 chr2 22276476 22276560 -228411294 + L2 LINE L2 1225 1310 -2004 468 271 121 10 chr2 22276575 22276782 -228411072 - MLT1G LTR MaLR -358 232 3 2805 200 46 28 chr2 22276844 22276884 -228410970 + MER67B LTR ERV1 1 39 -622 2316 126 21 19 chr2 22276884 22277256 -228410598 + THE1C LTR MaLR 3 375 0 7389 157 57 38 chr2 22277256 22278801 -228409053 + THE1C-int LTR MaLR 5 1580 0 2257 157 5 11 chr2 22278801 22279178 -228408676 + THE1C LTR MaLR 1 375 0 2805 200 46 28 chr2 22279178 22279784 -228408070 + MER67B LTR ERV1 38 661 0 259 264 60 104 chr2 22279788 22279989 -228407865 - MLT1G-int LTR MaLR -69 1302 1111 1393 214 36 36 chr2 22281358 22281723 -228406131 - MLT1A1 LTR MaLR 0 365 1 951 292 71 21 chr2 22281725 22282202 -228405652 - MLT1G LTR MaLR -93 497 1 207 146 0 0 chr2 22282265 22282306 -228405548 + (CA)n Simple_repeat Simple_repeat 1 41 0 782 246 39 58 chr2 22282588 22282998 -228404856 - L1ME1 LINE L1 -5 6161 5760 2251 243 58 5 chr2 22282999 22283563 -228404291 + MLT1A1-int LTR MaLR 1137 1730 -5 1628 210 40 11 chr2 22283574 22283926 -228403928 + MLT1A1 LTR MaLR 1 362 -3 1009 213 12 12 chr2 22283933 22284177 -228403677 - L1ME1 LINE L1 -409 5757 5514 2067 93 3 93 chr2 22284597 22284929 -228402925 - AluSp SINE Alu -11 302 1 363 330 98 17 chr2 22285008 22285244 -228402610 - L2 LINE L2 -79 3234 2980 286 318 81 55 chr2 22285362 22285598 -228402256 - L2 LINE L2 -438 2876 2635 22096 156 23 9 chr2 22285607 22285815 -228402039 + L1PA10 LINE L1 1028 1232 -5251 216 0 0 0 chr2 22285815 22285839 -228402015 + (CAA)n Simple_repeat Simple_repeat 1 24 0 22096 156 23 9 chr2 22285839 22290969 -228396885 + L1PA10 LINE L1 1232 6483 0 479 349 24 31 chr2 22291086 22291341 -228396513 - L2 LINE L2 -757 2557 2305 1492 106 8 16 chr2 22291350 22291605 -228396249 + L1MA3 LINE L1 6017 6269 -36 23 0 0 0 chr2 22291605 22291628 -228396226 + AT_rich Low_complexity Low_complexity 1 23 0 621 279 129 59 chr2 22291662 22292304 -228395550 - L2 LINE L2 -1056 2258 1572 207 69 0 0 chr2 22292420 22292449 -228395405 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 2156 93 17 3 chr2 22292689 22292980 -228394874 + AluSg SINE Alu 8 302 -8 27 0 0 0 chr2 22293013 22293040 -228394814 + AT_rich Low_complexity Low_complexity 1 27 0 317 282 0 0 chr2 22294531 22294616 -228393238 + (ATG)n Simple_repeat Simple_repeat 1 85 0 207 69 0 0 chr2 22295232 22295261 -228392593 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1210 235 77 37 chr2 22298318 22298697 -228389157 - MSTD LTR MaLR 0 396 3 183 353 24 12 chr2 22299952 22300037 -228387817 + L3 LINE CR1 1371 1456 -121 204 316 61 20 chr2 22300137 22300235 -228387619 - MIR SINE MIR -155 107 6 196 353 102 21 chr2 22301667 22301799 -228386055 - MIR SINE MIR -68 140 6 184 255 20 0 chr2 22302015 22302066 -228385788 - L2 LINE L2 -83 3189 3138 216 287 42 91 chr2 22303707 22303795 -228384059 + L2 LINE L2 2600 2680 -634 1180 180 37 26 chr2 22303795 22304067 -228383787 - ORSL DNA AcHobo 0 275 1 216 287 42 91 chr2 22304067 22304121 -228383733 + L2 LINE L2 2680 2735 -579 250 377 35 10 chr2 22304853 22305052 -228382802 + MIR3 SINE MIR 2 205 -3 337 344 54 32 chr2 22306029 22306215 -228381639 - MIR SINE MIR -10 252 63 1923 147 0 38 chr2 22308227 22308541 -228379313 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr2 22309474 22309495 -228378359 + AT_rich Low_complexity Low_complexity 1 21 0 182 61 0 30 chr2 22310859 22310892 -228376962 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 554 106 0 0 chr2 22310893 22310978 -228376876 - L1PA13 LINE L1 -30 6133 6049 644 268 77 30 chr2 22311496 22311932 -228375922 - LTR33 LTR ERVL -5 516 25 308 338 26 19 chr2 22312568 22312722 -228375132 - MIR SINE MIR -5 257 103 277 217 43 6 chr2 22312850 22313011 -228374843 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 690 295 87 62 chr2 22314026 22314508 -228373346 - MLT1G1 LTR MaLR 0 595 102 1836 96 96 0 chr2 22317571 22317842 -228370012 + AluSg SINE Alu 1 297 -13 248 311 39 29 chr2 22317950 22318053 -228369801 + MIR3 SINE MIR 60 163 -45 1137 273 72 45 chr2 22318160 22318867 -228368987 - L2 LINE L2 -96 3217 2490 318 275 100 0 chr2 22320459 22320579 -228367275 - L2 LINE L2 -1362 1952 1821 243 0 0 0 chr2 22320876 22320903 -228366951 + (TG)n Simple_repeat Simple_repeat 1 27 0 610 217 37 25 chr2 22321025 22321186 -228366668 - MIR SINE MIR -56 206 44 183 100 0 0 chr2 22321539 22321569 -228366285 + (GGAAA)n Simple_repeat Simple_repeat 3 32 0 194 290 41 69 chr2 22322034 22322179 -228365675 - MIR SINE MIR -40 222 82 181 279 87 39 chr2 22322401 22322505 -228365349 - L3 LINE CR1 -90 1487 1379 183 314 0 0 chr2 22322948 22322999 -228364855 - L2 LINE L2 -16 3256 3206 211 250 18 18 chr2 22323455 22323511 -228364343 + L2 LINE L2 3209 3264 -49 216 97 0 0 chr2 22323521 22323552 -228364302 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 419 206 7 78 chr2 22324388 22324529 -228363325 + L1ME3 LINE L1 5832 5962 -200 198 342 237 0 chr2 22324777 22324891 -228362963 - MIR3 SINE MIR -49 159 19 284 291 120 0 chr2 22325575 22325692 -228362162 + MIR SINE MIR 96 226 -36 304 302 75 28 chr2 22325915 22326021 -228361833 - L3 LINE CR1 -60 1517 1407 22 56 0 0 chr2 22326612 22326648 -228361206 + AT_rich Low_complexity Low_complexity 1 36 0 2288 105 0 3 chr2 22326840 22327146 -228360708 + AluSg SINE Alu 1 305 -5 349 296 116 37 chr2 22327744 22327933 -228359921 - MIR SINE MIR -1 261 58 2152 118 3 7 chr2 22327940 22328244 -228359610 + AluSx SINE Alu 3 305 -7 2219 110 3 0 chr2 22328580 22328879 -228358975 + AluSx SINE Alu 1 300 -12 341 286 130 7 chr2 22328983 22329089 -228358765 + MIR SINE MIR 81 213 -49 225 0 0 0 chr2 22329089 22329114 -228358740 + (TA)n Simple_repeat Simple_repeat 1 25 0 341 286 130 7 chr2 22329114 22329161 -228358693 + MIR SINE MIR 213 253 -9 455 250 22 15 chr2 22330088 22330224 -228357630 - Charlie2a DNA MER1_type 0 2862 2726 551 189 31 66 chr2 22330243 22330439 -228357415 - Charlie2a DNA MER1_type -1202 1660 1472 733 288 66 28 chr2 22330605 22330893 -228356961 - Charlie2a DNA MER1_type -2477 305 7 258 239 34 111 chr2 22330976 22331093 -228356761 - MIR3 SINE MIR -7 201 94 2460 53 3 3 chr2 22331437 22331739 -228356115 - AluY SINE Alu -9 302 1 25 0 0 0 chr2 22335942 22335967 -228351887 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr2 22335973 22336007 -228351847 + (CA)n Simple_repeat Simple_repeat 2 35 0 344 298 80 20 chr2 22336182 22336333 -228351521 + MER5A DNA MER1_type 2 161 -28 366 241 148 92 chr2 22336652 22337174 -228350680 - MER34C LTR ERV1 0 585 35 202 326 124 8 chr2 22338101 22338230 -228349624 - L2 LINE L2 -2 3270 3127 1020 196 99 48 chr2 22338343 22338717 -228349137 + MLT1C LTR MaLR 6 390 0 1143 49 0 0 chr2 22339166 22339308 -228348546 - L1PA8 LINE L1 -419 5753 5612 3243 71 7 0 chr2 22339318 22339740 -228348114 + L1PA8 LINE L1 5746 6170 -2 780 284 90 29 chr2 22340506 22341407 -228346447 + L1MEc LINE L1 705 1461 -4754 * 929 274 119 35 chr2 22341390 22341744 -228346110 + L1MEc LINE L1 2157 2480 -3735 1690 204 132 34 chr2 22341744 22341856 -228345998 + MLT2B1 LTR ERVL 4 104 -416 2560 43 0 3 chr2 22341856 22342160 -228345694 + AluY SINE Alu 1 303 -8 1690 204 132 34 chr2 22342160 22342463 -228345391 + MLT2B1 LTR ERVL 104 376 -144 189 107 0 0 chr2 22342463 22342491 -228345363 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 1690 204 132 34 chr2 22342491 22342504 -228345350 + MLT2B1 LTR ERVL 376 386 -134 219 36 0 0 chr2 22342504 22342532 -228345322 + (TG)n Simple_repeat Simple_repeat 2 29 0 1690 204 132 34 chr2 22342532 22342572 -228345282 + MLT2B1 LTR ERVL 386 520 0 929 274 119 35 chr2 22342572 22342924 -228344930 + L1MEc LINE L1 2480 2885 -3330 1216 198 118 19 chr2 22342924 22343237 -228344617 - MER2 DNA MER2_type 0 344 1 929 274 119 35 chr2 22343237 22343251 -228344603 + L1MEc LINE L1 2885 2896 -3319 956 254 19 29 chr2 22343277 22343569 -228344285 + L1MEc LINE L1 3402 3691 -2524 2269 137 64 17 chr2 22343569 22343978 -228343876 + MSTA LTR MaLR 1 428 0 956 254 19 29 chr2 22343978 22344059 -228343795 + L1MEc LINE L1 3691 3771 -2444 256 210 20 40 chr2 22344092 22344192 -228343662 + L1MC5 LINE L1 7612 7709 -252 238 237 53 0 chr2 22344247 22344323 -228343531 - MER116 DNA Mariner 0 80 1 183 80 0 0 chr2 22345072 22345097 -228342757 + (CA)n Simple_repeat Simple_repeat 2 26 0 308 217 33 50 chr2 22345228 22345348 -228342506 - LTR41 LTR ERVL -6 767 650 685 237 47 51 chr2 22345685 22345942 -228341912 - LTR41 LTR ERVL -501 272 17 686 281 76 5 chr2 22346108 22346318 -228341536 + MIR SINE MIR 28 252 -10 274 310 100 0 chr2 22347282 22347382 -228340472 + L2 LINE L2 3163 3272 0 306 50 0 0 chr2 22348229 22348269 -228339585 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 326 180 0 0 chr2 22348275 22348325 -228339529 - 5S rRNA rRNA -70 51 2 22 0 0 0 chr2 22348660 22348682 -228339172 + AT_rich Low_complexity Low_complexity 1 22 0 301 300 65 25 chr2 22348689 22348889 -228338965 + L1M4 LINE L1 2225 2432 -3714 248 304 72 0 chr2 22349197 22349335 -228338519 - MER104 DNA Tc2 -31 149 2 27 0 0 0 chr2 22349392 22349419 -228338435 + AT_rich Low_complexity Low_complexity 1 27 0 360 311 15 15 chr2 22349555 22349690 -228338164 + MLT1I LTR MaLR 80 214 -195 6188 145 26 10 chr2 22349822 22350813 -228337041 + THE1C-int LTR MaLR 574 1580 0 2413 113 21 37 chr2 22350813 22351151 -228336703 + THE1C LTR MaLR 1 334 -41 2255 115 3 0 chr2 22351151 22351456 -228336398 - AluSx SINE Alu -1 311 6 2413 113 21 37 chr2 22351456 22351498 -228336356 + THE1C LTR MaLR 334 375 0 10580 136 31 89 chr2 22351498 22352351 -228335503 + Tigger1 DNA MER2_type 282 1182 -1236 1944 119 3 77 chr2 22352351 22352687 -228335167 + AluSp SINE Alu 1 311 -2 10580 136 31 89 chr2 22352687 22353301 -228334553 + Tigger1 DNA MER2_type 1182 1764 -654 870 187 6 29 chr2 22353301 22353472 -228334382 + FRAM SINE Alu 1 163 -13 10580 136 31 89 chr2 22353472 22354022 -228333832 + Tigger1 DNA MER2_type 1764 2344 -74 1575 230 110 17 chr2 22354052 22354643 -228333211 + L1MC3 LINE L1 4744 5389 -757 258 250 0 0 chr2 22354640 22354700 -228333154 - L1 LINE L1 -1179 4967 4908 * 3636 197 54 5 chr2 22354727 22355450 -228332404 - L1 LINE L1 -1225 4921 4150 288 0 0 0 chr2 22355450 22355482 -228332372 + (TC)n Simple_repeat Simple_repeat 2 33 0 3636 197 54 5 chr2 22355482 22355587 -228332267 - L1 LINE L1 -1996 4150 4052 * 3702 173 41 35 chr2 22355585 22356721 -228331133 + L1MA9 LINE L1 4941 6081 -231 403 194 58 10 chr2 22356723 22356826 -228331028 + L1MA9 LINE L1 6180 6287 -25 45 19 0 0 chr2 22356829 22356881 -228330973 + AT_rich Low_complexity Low_complexity 1 52 0 7281 201 41 25 chr2 22356908 22357246 -228330608 + L1MC3 LINE L1 5386 5717 -2068 2590 39 3 0 chr2 22357246 22357587 -228330267 + AluY SINE Alu 1 342 0 7281 201 41 25 chr2 22357587 22359019 -228328835 + L1MC3 LINE L1 5717 7186 -599 630 302 108 0 chr2 22359021 22359289 -228328565 - MER110 LTR ERV1 -7 484 188 521 315 80 28 chr2 22359578 22359940 -228327914 + L1ME LINE L1 5335 5715 -455 21 0 0 0 chr2 22360025 22360046 -228327808 + AT_rich Low_complexity Low_complexity 1 21 0 2235 129 44 46 chr2 22360046 22360481 -228327373 + Tigger2a DNA MER2_type 1 434 0 2456 162 9 12 chr2 22360730 22361157 -228326697 + MSTB LTR MaLR 1 426 0 299 273 36 9 chr2 22361322 22361432 -228326422 - L1M4 LINE L1 -1201 4945 4833 1355 264 47 28 chr2 22361482 22361975 -228325879 - L1M4 LINE L1 -1319 4827 4326 647 276 0 54 chr2 22361975 22362160 -228325694 + MER8 DNA MER2_type 1 175 -64 408 148 0 111 chr2 22362195 22362276 -228325578 - Tigger2a DNA MER2_type -361 73 2 2534 232 26 19 chr2 22362277 22363001 -228324853 - L1M4 LINE L1 -1823 4323 3595 22 0 0 0 chr2 22363122 22363144 -228324710 + AT_rich Low_complexity Low_complexity 1 22 0 2473 67 0 13 chr2 22363733 22364048 -228323806 - AluY SINE Alu 0 311 1 472 328 123 0 chr2 22366509 22366713 -228321141 - MIR SINE MIR -10 252 24 501 348 26 31 chr2 22367043 22367270 -228320584 - MIR SINE MIR -14 248 23 429 293 75 11 chr2 22367672 22367860 -228319994 - HAL1 LINE L1 -1933 574 375 230 143 41 0 chr2 22368280 22368329 -228319525 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 192 356 43 26 chr2 22368982 22369076 -228318778 + MIR SINE MIR 30 128 -80 4406 101 16 0 chr2 22369076 22369701 -228318153 + MER41B LTR ERV1 1 635 0 192 356 43 26 chr2 22369701 22369721 -228318133 + MIR SINE MIR 128 146 -62 22 0 0 0 chr2 22370272 22370294 -228317560 + AT_rich Low_complexity Low_complexity 1 22 0 238 48 0 48 chr2 22370307 22370349 -228317505 + (TA)n Simple_repeat Simple_repeat 1 40 0 475 284 161 14 chr2 22370617 22370835 -228317019 + MIR SINE MIR 13 262 0 505 278 97 34 chr2 22371163 22371339 -228316515 + MIR SINE MIR 65 251 -11 282 316 33 40 chr2 22371369 22371521 -228316333 + L2 LINE L2 3146 3296 -17 1309 276 72 35 chr2 22371870 22372765 -228315089 + L1MEc LINE L1 2159 3037 -3178 383 332 91 18 chr2 22372907 22373141 -228314713 + L1MEc LINE L1 3041 3292 -2923 794 222 4 50 chr2 22373154 22373399 -228314455 + L1ME2 LINE L1 4467 4700 -1446 422 232 90 13 chr2 22373410 22373565 -228314289 + L1ME2 LINE L1 5281 5447 -715 366 236 79 0 chr2 22373589 22373716 -228314138 + L1ME2 LINE L1 5751 5887 -277 398 278 97 42 chr2 22373719 22373935 -228313919 + L1ME2 LINE L1 5936 6163 -1 298 328 56 31 chr2 22373928 22373949 -228313905 + L1MEc LINE L1 3398 3417 -2798 * 3293 130 43 26 chr2 22373949 22374532 -228313322 + LTR49 LTR ERV1 3 595 0 298 328 56 31 chr2 22374532 22374867 -228312987 + L1MEc LINE L1 3417 3763 -2452 814 268 98 40 chr2 22375043 22375662 -228312192 - L1M4 LINE L1 -1809 4337 3683 315 252 50 0 chr2 22376274 22376393 -228311461 - L1ME3A LINE L1 -4 6166 6042 2127 122 7 0 chr2 22376394 22376688 -228311166 + AluSx SINE Alu 1 296 -16 344 284 0 11 chr2 22376691 22376786 -228311068 - L1MC4 LINE L1 -1339 6703 6610 355 300 23 0 chr2 22376787 22376917 -228310937 - L1ME3A LINE L1 -123 6047 5915 618 266 86 5 chr2 22376919 22377141 -228310713 - L1ME3A LINE L1 -285 5885 5646 393 86 43 0 chr2 22377141 22377211 -228310643 - MER31-int LTR ERV1 -1985 2951 2879 2312 61 16 13 chr2 22377235 22377545 -228310309 - AluY SINE Alu 0 311 1 1096 171 6 0 chr2 22377548 22377724 -228310130 - AluJb SINE Alu -16 296 120 1231 94 42 5 chr2 22377744 22377936 -228309918 - L1PA3 LINE L1 0 6155 5957 879 263 67 24 chr2 22377936 22378224 -228309630 - L1ME3A LINE L1 -518 5652 5343 297 0 0 0 chr2 22378224 22378257 -228309597 + (TG)n Simple_repeat Simple_repeat 2 34 0 879 263 67 24 chr2 22378257 22378344 -228309510 - L1ME3A LINE L1 -827 5343 5261 308 230 50 80 chr2 22379681 22379781 -228308073 - MER91C DNA MER1_type -11 129 33 249 33 0 0 chr2 22380537 22380567 -228307287 + (TG)n Simple_repeat Simple_repeat 1 30 0 256 219 0 78 chr2 22380745 22380809 -228307045 + MER115 DNA AcHobo 1 59 -634 2095 101 3 21 chr2 22380950 22381270 -228306584 - AluSx SINE Alu 0 315 1 1327 179 43 33 chr2 22381704 22382005 -228305849 + MLT2C1 LTR ERVL 93 396 -1 357 276 30 30 chr2 22382051 22382185 -228305669 - MLT1K LTR MaLR -338 250 117 270 321 46 55 chr2 22383748 22383857 -228303997 - MIR SINE MIR -58 150 43 326 339 130 28 chr2 22384303 22384480 -228303374 + MER91A DNA MER1_type 2 196 0 1056 208 55 104 chr2 22385189 22385523 -228302331 + MLT1A1 LTR MaLR 1 350 -15 450 0 0 0 chr2 22385523 22385573 -228302281 + (TA)n Simple_repeat Simple_repeat 1 50 0 279 0 0 0 chr2 22385572 22385603 -228302251 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 1056 208 55 104 chr2 22385573 22385652 -228302202 + MLT1A1 LTR MaLR 350 365 0 644 271 124 19 chr2 22386229 22386439 -228301415 - MIR SINE MIR -28 234 3 643 317 0 0 chr2 22387125 22387289 -228300565 - MIR SINE MIR -98 164 1 1129 171 9 46 chr2 22388033 22388249 -228299605 + AluJb SINE Alu 86 293 -19 226 147 0 0 chr2 22389027 22389061 -228298793 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 813 190 0 0 chr2 22389061 22389240 -228298614 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 204 345 84 49 chr2 22389332 22389474 -228298380 - L2 LINE L2 -5 3267 3121 245 274 48 36 chr2 22389842 22389926 -228297928 + MER96 DNA MER1_type? 91 175 0 2256 171 70 42 chr2 22390258 22390786 -228297068 - MER74A LTR ERVL -15 543 1 252 0 0 0 chr2 22391772 22391800 -228296054 + (A)n Simple_repeat Simple_repeat 1 28 0 1688 238 40 12 chr2 22391802 22392223 -228295631 + MLT1C LTR MaLR 35 467 0 1671 194 156 34 chr2 22393041 22393535 -228294319 + L1ME2 LINE L1 5611 6164 0 2165 99 3 0 chr2 22393546 22393917 -228293937 + AluSp SINE Alu 2 373 0 778 255 80 34 chr2 22394771 22395010 -228292844 + MIR SINE MIR 13 262 0 8585 196 33 134 chr2 22398454 22400821 -228287033 + L1M2 LINE L1 9 2056 -4793 1718 10 0 0 chr2 22400821 22401015 -228286839 - L1PA3 LINE L1 -5 6150 5957 8585 196 33 134 chr2 22401015 22401424 -228286430 + L1M2 LINE L1 2056 2505 -4344 2442 42 0 7 chr2 22401412 22401719 -228286135 + L1P LINE L1 2768 3072 -3074 * 563 180 0 18 chr2 22401708 22401819 -228286035 + L1M2 LINE L1 2494 2602 -4247 * 2200 155 5 8 chr2 22401822 22402196 -228285658 - THE1C LTR MaLR 0 375 3 9532 123 35 40 chr2 22402198 22403786 -228284068 - THE1C-int LTR MaLR 0 1580 1 2292 128 11 14 chr2 22403788 22404147 -228283707 - THE1C LTR MaLR -2 373 16 2033 209 33 31 chr2 22404149 22404910 -228282944 + L1M2 LINE L1 2601 3362 -3486 12129 237 22 9 chr2 22404930 22409940 -228277914 - L1PA16 LINE L1 -40 6183 899 4797 141 19 20 chr2 22409941 22410793 -228277061 + L1MA4A LINE L1 5443 6293 -10 28 29 0 0 chr2 22411246 22411281 -228276573 + AT_rich Low_complexity Low_complexity 1 35 0 1439 214 0 0 chr2 22411294 22411575 -228276279 - AluJb SINE Alu -31 281 1 3641 241 49 39 chr2 22411658 22412825 -228275029 + L1MCb LINE L1 1 1178 -4867 411 302 62 36 chr2 22412816 22413041 -228274813 + HAL1 LINE L1 1373 1603 -904 * 450 272 77 57 chr2 22413128 22413431 -228274423 + L1MCb LINE L1 3150 3445 -3119 1645 150 98 7 chr2 22413431 22413717 -228274137 + AluSx SINE Alu 1 312 0 450 272 77 57 chr2 22413717 22414167 -228273687 + L1MCb LINE L1 3445 3918 -2646 719 305 89 38 chr2 22414192 22414641 -228273213 - L2 LINE L2 -18 3295 2824 372 312 77 16 chr2 22414685 22414996 -228272858 + L1MCb LINE L1 3997 4326 -2238 750 366 65 11 chr2 22415117 22415486 -228272368 + LTR16A LTR ERVL 55 443 -7 846 310 113 33 chr2 22415509 22415779 -228272075 + ERVL LTR ERVL 4479 4726 -1038 2436 125 6 0 chr2 22415779 22416132 -228271722 - THE1A LTR MaLR 0 355 1 11037 102 5 29 chr2 22416132 22417751 -228270103 - THE1A-int LTR MaLR 0 1580 1 2486 105 8 0 chr2 22417751 22418103 -228269751 - THE1A LTR MaLR 0 355 1 846 310 113 33 chr2 22418103 22418379 -228269475 + ERVL LTR ERVL 4725 5071 -693 352 331 102 39 chr2 22418391 22418696 -228269158 + MLT1I LTR MaLR 1 324 -85 298 162 27 0 chr2 22418703 22418777 -228269077 + (TA)n Simple_repeat Simple_repeat 2 77 0 6540 183 31 41 chr2 22419073 22421458 -228266396 + L1MA7 LINE L1 4355 6706 -3 5601 148 18 11 chr2 22421893 22422760 -228265094 - L1PA16 LINE L1 -3 6163 5281 198 103 0 0 chr2 22422760 22422789 -228265065 + (CTTG)n Simple_repeat Simple_repeat 3 31 0 5601 148 18 11 chr2 22422789 22423156 -228264698 - L1PA16 LINE L1 -885 5281 4918 638 202 154 0 chr2 22423402 22423509 -228264345 - L1MA9 LINE L1 -39 6273 6184 273 57 0 0 chr2 22423509 22423544 -228264310 + (TG)n Simple_repeat Simple_repeat 2 36 0 638 202 154 0 chr2 22423544 22423624 -228264230 - L1MA9 LINE L1 -128 6184 6057 2843 13 0 0 chr2 22424597 22424907 -228262947 + AluYb8 SINE Alu 1 310 -8 25 0 0 0 chr2 22425573 22425598 -228262256 + AT_rich Low_complexity Low_complexity 1 25 0 28 61 0 0 chr2 22425707 22425756 -228262098 + AT_rich Low_complexity Low_complexity 1 49 0 304 271 36 6 chr2 22425756 22425922 -228261932 + (TA)n Simple_repeat Simple_repeat 1 171 0 683 274 152 25 chr2 22426147 22426508 -228261346 - MLT1J LTR MaLR -35 476 70 4009 78 0 0 chr2 22426520 22427054 -228260800 - L1P LINE L1 -3087 3059 2525 14379 82 4 35 chr2 22427054 22429835 -228258019 + L1PA7 LINE L1 3396 6154 0 4410 167 12 65 chr2 22431800 22432866 -228254988 - L1MB1 LINE L1 -1 6167 5146 1244 225 78 15 chr2 22432865 22433198 -228254656 + L1MB1 LINE L1 4795 5148 -998 * 835 368 56 23 chr2 22433254 22433986 -228253868 + L2 LINE L2 1711 2466 -848 373 266 78 69 chr2 22433986 22434306 -228253548 - MER97c DNA MER1_type? 0 1090 768 22 56 0 0 chr2 22434432 22434468 -228253386 + AT_rich Low_complexity Low_complexity 1 36 0 1279 236 36 25 chr2 22434633 22434993 -228252861 - MER97a DNA MER1_type? -289 605 242 196 118 20 20 chr2 22435031 22435082 -228252772 + (TA)n Simple_repeat Simple_repeat 1 51 0 358 35 0 35 chr2 22435132 22435190 -228252664 + (TA)n Simple_repeat Simple_repeat 1 56 0 1893 105 61 107 chr2 22435197 22435362 -228252492 - THE1C LTR MaLR 0 375 204 234 0 0 0 chr2 22435362 22435388 -228252466 + (GA)n Simple_repeat Simple_repeat 1 26 0 1893 105 61 107 chr2 22435388 22435614 -228252240 - THE1C LTR MaLR -171 204 2 218 87 43 22 chr2 22435636 22435682 -228252172 + (TA)n Simple_repeat Simple_repeat 1 47 0 435 193 12 0 chr2 22435710 22435793 -228252061 - MER97b DNA MER1_type? -817 236 153 332 250 23 0 chr2 22435793 22435881 -228251973 + L1MD2 LINE L1 6048 6137 -222 266 246 0 0 chr2 22435885 22435950 -228251904 + (TA)n Simple_repeat Simple_repeat 1 65 0 2113 117 0 0 chr2 22436001 22436334 -228251520 - AluSg SINE Alu 0 333 1 467 225 70 8 chr2 22436354 22436483 -228251371 - MER97c DNA MER1_type? -945 145 9 425 346 61 24 chr2 22436570 22436899 -228250955 + L2 LINE L2 2543 2883 -431 1276 262 47 13 chr2 22437326 22437749 -228250105 - MERVL LTR ERVL -3264 2221 1742 383 328 15 51 chr2 22437763 22437958 -228249896 - MERVL LTR ERVL -3422 1574 1387 500 379 61 0 chr2 22438030 22438310 -228249544 - MERVL LTR ERVL -3711 1285 989 901 224 22 0 chr2 22438311 22438494 -228249360 - MER5A DNA MER1_type -2 187 1 489 353 34 11 chr2 22438510 22438776 -228249078 - MERVL LTR ERVL -4016 980 709 294 350 150 10 chr2 22439067 22439361 -228248493 - L2 LINE L2 -805 2509 2175 954 124 0 0 chr2 22439362 22439515 -228248339 + (TAGA)n Simple_repeat Simple_repeat 3 155 0 21 89 0 0 chr2 22439733 22439789 -228248065 + AT_rich Low_complexity Low_complexity 1 56 0 21 71 0 0 chr2 22442329 22442371 -228245483 + AT_rich Low_complexity Low_complexity 1 42 0 327 264 23 23 chr2 22442516 22442603 -228245251 + MLT2E LTR ERVL 34 120 -508 2172 84 54 3 chr2 22442613 22442909 -228244945 + AluSq SINE Alu 1 311 -2 318 350 20 0 chr2 22442909 22443009 -228244845 + MER81 DNA DNA 3 104 -10 986 287 59 72 chr2 22443010 22443539 -228244315 + MLT2E LTR ERVL 107 628 0 198 296 19 0 chr2 22443875 22443929 -228243925 + L2 LINE L2 3198 3252 -20 182 173 96 58 chr2 22445022 22445074 -228242780 - MIR3 SINE MIR -38 170 117 367 333 8 15 chr2 22445811 22445943 -228241911 + MIR3 SINE MIR 38 168 -40 385 305 136 86 chr2 22446034 22446476 -228241378 - L2 LINE L2 0 3272 2809 2096 291 61 9 chr2 22447168 22447853 -228240001 - L3 LINE CR1 -457 1120 400 373 296 43 17 chr2 22447981 22448096 -228239758 + L2 LINE L2 3196 3313 0 1166 231 0 4 chr2 22448202 22448427 -228239427 + MER58A DNA MER1_type 1 224 0 204 363 134 25 chr2 22448652 22448809 -228239045 - MIR SINE MIR -5 257 84 350 409 50 0 chr2 22452795 22452954 -228234900 + L2 LINE L2 3106 3272 0 566 304 27 11 chr2 22453286 22453470 -228234384 - MIR SINE MIR -13 249 63 1477 215 0 13 chr2 22453473 22453780 -228234074 - AluJo SINE Alu -9 303 1 230 324 14 0 chr2 22454174 22454245 -228233609 - L2 LINE L2 -1 3271 3200 1979 221 54 50 chr2 22457670 22457781 -228230073 - MER68 LTR ERV1 0 562 453 2298 125 3 55 chr2 22457781 22458165 -228229689 - THE1B LTR MaLR 0 364 1 1979 221 54 50 chr2 22458165 22458613 -228229241 - MER68 LTR ERV1 -109 453 1 318 302 101 0 chr2 22460442 22460581 -228227273 + MIR SINE MIR 18 170 -92 283 258 15 0 chr2 22461318 22461384 -228226470 - L3 LINE CR1 -2 1575 1509 1611 173 3 13 chr2 22461525 22461831 -228226023 - L1PB4 LINE L1 -268 5888 5586 767 264 0 0 chr2 22461830 22462004 -228225850 + L1PA16 LINE L1 5942 6115 -51 * 451 357 58 49 chr2 22462123 22462550 -228225304 + L2 LINE L2 2596 3032 -281 881 64 80 0 chr2 22462550 22462675 -228225179 - MER85 DNA T2_type -2 137 3 451 357 58 49 chr2 22462675 22462958 -228224896 + L2 LINE L2 3032 3311 -2 217 214 0 0 chr2 22463409 22463451 -228224403 + (TG)n Simple_repeat Simple_repeat 1 42 0 2292 105 66 0 chr2 22463459 22463791 -228224063 - THE1B LTR MaLR 0 364 11 182 333 0 0 chr2 22463814 22463862 -228223992 - L3 LINE CR1 -595 982 935 1009 268 198 22 chr2 22463929 22464388 -228223466 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr2 22464512 22464533 -228223321 + AT_rich Low_complexity Low_complexity 1 21 0 272 343 117 54 chr2 22464560 22464982 -228222872 - L3 LINE CR1 -872 705 240 6962 62 2 1 chr2 22464982 22466055 -228221799 + L1PA5 LINE L1 5078 6151 -3 272 343 117 54 chr2 22466055 22466169 -228221685 - L3 LINE CR1 -1337 240 135 370 280 51 89 chr2 22467067 22467417 -228220437 + L1ME LINE L1 5311 5647 -474 2085 152 0 0 chr2 22467422 22467725 -228220129 + AluSq SINE Alu 1 303 -10 4162 86 50 3 chr2 22468577 22469158 -228218696 + LTR14B LTR ERVK 1 608 0 22 0 0 0 chr2 22469422 22469444 -228218410 + AT_rich Low_complexity Low_complexity 1 22 0 443 286 108 26 chr2 22469710 22470053 -228217801 - L1ME LINE L1 -534 5628 5258 33 0 0 0 chr2 22470697 22470730 -228217124 + AT_rich Low_complexity Low_complexity 1 33 0 209 385 10 10 chr2 22471809 22471913 -228215941 - L2 LINE L2 -244 3028 2925 31 26 0 0 chr2 22473237 22473275 -228214579 + AT_rich Low_complexity Low_complexity 1 38 0 418 303 67 30 chr2 22473780 22473945 -228213909 - MIR SINE MIR -28 234 64 232 227 0 0 chr2 22474818 22474862 -228212992 + L2 LINE L2 2703 2746 -568 1011 177 4 62 chr2 22474993 22475058 -228212796 - L1MD1 LINE L1 -5 6237 6170 2250 83 7 0 chr2 22475058 22475347 -228212507 + AluY SINE Alu 1 291 -20 1011 177 4 62 chr2 22475347 22475524 -228212330 - L1MD1 LINE L1 -72 6170 6009 1833 165 38 28 chr2 22475524 22475917 -228211937 - L1MD1 LINE L1 -564 5795 5399 1700 120 12 56 chr2 22475918 22476259 -228211595 + THE1C LTR MaLR 1 326 -49 337 339 130 28 chr2 22476777 22476954 -228210900 + MER91A DNA MER1_type 2 196 0 866 220 54 109 chr2 22477663 22477997 -228209857 + MLT1A1 LTR MaLR 1 352 -13 450 0 0 0 chr2 22477997 22478047 -228209807 + (TA)n Simple_repeat Simple_repeat 1 50 0 261 0 0 0 chr2 22478046 22478075 -228209779 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 866 220 54 109 chr2 22478047 22478126 -228209728 + MLT1A1 LTR MaLR 352 365 0 1564 182 5 39 chr2 22478786 22479244 -228208610 - L1M LINE L1 -751 5395 4965 182 174 22 0 chr2 22479266 22479312 -228208542 + CT-rich Low_complexity Low_complexity 3 49 0 247 163 0 0 chr2 22479329 22479372 -228208482 - L1M4 LINE L1 -1204 4942 4900 2042 149 0 0 chr2 22479384 22479680 -228208174 - AluSx SINE Alu -16 296 1 390 291 52 58 chr2 22481334 22481661 -228206193 - HsTC2 DNA Tc2 -1086 812 488 279 308 112 14 chr2 22482024 22482167 -228205687 + MIR SINE MIR 100 256 -6 203 303 45 22 chr2 22482857 22482946 -228204908 + L2 LINE L2 1468 1558 -1756 1483 234 112 27 chr2 22482947 22483510 -228204344 - L1MCb LINE L1 -4873 1172 562 944 301 18 6 chr2 22483710 22484036 -228203818 + MER93a LTR ERV1 73 402 0 633 284 44 68 chr2 22484051 22484460 -228203394 - L1MCb LINE L1 -5486 559 161 4657 52 3 0 chr2 22484696 22485275 -228202579 - L1PA7 LINE L1 0 6154 5574 567 215 9 9 chr2 22485286 22485393 -228202461 - MER5B DNA MER1_type -6 172 66 301 253 32 118 chr2 22485417 22485638 -228202216 + L2 LINE L2 2682 2883 -431 * 513 236 6 56 chr2 22485622 22485783 -228202071 - L2 LINE L2 0 3313 3161 189 195 0 0 chr2 22485786 22485827 -228202027 + (TA)n Simple_repeat Simple_repeat 1 41 0 3847 158 44 19 chr2 22485830 22486834 -228201020 - L1MB1 LINE L1 -81 6087 5058 1865 320 96 35 chr2 22486834 22488052 -228199802 - L2 LINE L2 -196 3117 1826 1012 309 63 50 chr2 22488056 22488590 -228199264 + L1ME LINE L1 6 532 -5538 1559 201 25 19 chr2 22488590 22488953 -228198901 - MLT1A1 LTR MaLR 0 365 1 1012 309 63 50 chr2 22488953 22489485 -228198369 + L1ME LINE L1 532 1086 -4984 566 266 121 32 chr2 22489489 22489737 -228198117 + L1ME LINE L1 1152 1421 -4840 328 147 29 0 chr2 22591092 22591160 -228096694 - L1MD2 LINE L1 -3 6356 6287 2170 130 0 9 chr2 22591162 22591478 -228096376 + AluSq SINE Alu 1 313 0 2236 111 0 7 chr2 22591782 22592079 -228095775 + AluSq SINE Alu 2 296 -17 872 167 30 15 chr2 22592107 22592305 -228095549 + L1MD3 LINE L1 7794 7994 -1 662 286 12 6 chr2 22592798 22592969 -228094885 - MER90 LTR ERV1 -442 172 1 498 223 67 80 chr2 22593370 22593422 -228094432 + MER112 DNA MER1_type 29 80 -180 321 26 0 0 chr2 22593422 22593460 -228094394 + (CA)n Simple_repeat Simple_repeat 2 39 0 498 223 67 80 chr2 22593460 22593631 -228094223 + MER112 DNA MER1_type 80 249 -11 2113 133 0 3 chr2 22594050 22594344 -228093510 + AluSx SINE Alu 1 293 -19 290 254 26 70 chr2 22595140 22595254 -228092600 - MER5A DNA MER1_type 0 189 70 2250 101 7 0 chr2 22597119 22597446 -228090408 + AluSg SINE Alu 7 335 0 579 265 99 24 chr2 22597448 22597701 -228090153 + L1ME1 LINE L1 5871 6142 -24 6682 174 35 10 chr2 22598129 22599341 -228088513 + MST-int LTR MaLR 216 1457 -194 852 251 5 5 chr2 22599347 22599554 -228088300 - AluJb SINE Alu 0 312 106 1765 129 82 0 chr2 22600523 22600803 -228087051 + AluJb SINE Alu 1 303 -9 1467 166 25 7 chr2 22601284 22601567 -228086287 + L1MA4A LINE L1 6016 6303 0 191 316 93 53 chr2 22601803 22602028 -228085826 - L3 LINE CR1 -15 1562 1329 252 238 16 16 chr2 22602997 22603060 -228084794 + CT-rich Low_complexity Low_complexity 2 64 0 342 238 91 11 chr2 22603063 22603236 -228084618 - L1MC4 LINE L1 0 8042 7725 244 309 43 0 chr2 22603332 22603426 -228084428 + MIR SINE MIR 28 125 -137 216 188 165 24 chr2 22603592 22603677 -228084177 + MIR SINE MIR 79 175 -87 215 323 31 0 chr2 22603808 22603904 -228083950 + MIR SINE MIR 23 121 -141 21 0 0 0 chr2 22603909 22603930 -228083924 + AT_rich Low_complexity Low_complexity 1 21 0 602 173 0 39 chr2 22603936 22604063 -228083791 + L1PB3 LINE L1 6033 6154 0 23 54 0 0 chr2 22604063 22604100 -228083754 + AT_rich Low_complexity Low_complexity 1 37 0 603 239 137 24 chr2 22604470 22604675 -228083179 - MIR SINE MIR 0 262 35 413 266 26 9 chr2 22604841 22604954 -228082900 - L2 LINE L2 -21 3251 3137 24 0 0 0 chr2 22606053 22606077 -228081777 + AT_rich Low_complexity Low_complexity 1 24 0 1566 153 47 4 chr2 22607197 22607452 -228080402 + AluJb SINE Alu 1 266 -46 2181 121 3 0 chr2 22607484 22607773 -228080081 + AluSx SINE Alu 1 290 -22 2368 81 3 0 chr2 22608159 22608454 -228079400 - AluY SINE Alu -15 296 1 1383 162 4 9 chr2 22608462 22608690 -228079164 - THE1C LTR MaLR -148 227 1 357 101 145 159 chr2 22609397 22609445 -228078409 - MIR SINE MIR -24 238 191 1604 123 0 13 chr2 22609445 22609673 -228078181 + AluSc SINE Alu 83 307 -2 357 101 145 159 chr2 22609673 22609762 -228078092 - MIR SINE MIR -71 191 103 232 274 68 68 chr2 22609766 22609912 -228077942 + MIR3 SINE MIR 2 147 -61 24 0 0 0 chr2 22610438 22610462 -228077392 + AT_rich Low_complexity Low_complexity 1 24 0 1774 180 23 0 chr2 22610464 22610769 -228077085 + AluJb SINE Alu 1 312 0 573 295 121 43 chr2 22610808 22611154 -228076700 + L3 LINE CR1 1119 1491 -86 733 277 46 35 chr2 22611154 22611439 -228076415 + L1ME LINE L1 5328 5615 -506 246 243 57 0 chr2 22611878 22611948 -228075906 + MIR SINE MIR 78 151 -111 8187 19 2 3 chr2 22712609 22713825 -227974029 + L1PA2 LINE L1 4887 6155 0 2025 209 127 99 chr2 22715802 22716648 -227971206 - L1MC4 LINE L1 -4 8038 7170 364 296 24 52 chr2 22717501 22717644 -227970210 + MIR SINE MIR 20 161 -65 473 297 45 20 chr2 22717745 22717947 -227969907 - L2 LINE L2 -126 3187 2981 681 269 56 60 chr2 22718230 22718677 -227969177 - MLT1J LTR MaLR 0 511 4 230 237 0 17 chr2 22718985 22719044 -227968810 + (CA)n Simple_repeat Simple_repeat 1 58 0 788 257 59 0 chr2 22720109 22720346 -227967508 + MIR SINE MIR 4 254 -8 233 57 29 0 chr2 22720347 22720382 -227967472 + (TTA)n Simple_repeat Simple_repeat 3 38 0 190 364 16 25 chr2 22720397 22720518 -227967336 - L2 LINE L2 -1406 1908 1789 234 300 73 0 chr2 22720732 22720839 -227967015 - MIR SINE MIR -66 142 82 2186 96 0 68 chr2 22720873 22721196 -227966658 - AluSx SINE Alu -11 301 1 1927 136 39 0 chr2 22722032 22722318 -227965536 - AluSg SINE Alu -13 297 1 1715 179 51 77 chr2 22722623 22723131 -227964723 - MLT1D LTR MaLR -5 500 6 38510 44 28 4 chr2 22724097 22728855 -227958999 - L1P LINE L1 -1272 4874 3 252 242 0 44 chr2 22728908 22728999 -227958855 + T-rich Low_complexity Low_complexity 3 89 0 198 224 26 79 chr2 22729596 22729672 -227958182 - L2 LINE L2 -16 3256 3185 * 544 299 74 30 chr2 22729652 22729883 -227957971 + MIR SINE MIR 6 246 -16 266 285 91 31 chr2 22730734 22731030 -227956824 - L1ME LINE L1 -502 5619 5306 267 300 57 29 chr2 22731361 22731501 -227956353 - MLT1J LTR MaLR -2 509 366 2401 103 0 0 chr2 22732701 22733011 -227954843 - AluY SINE Alu -1 310 1 2571 243 103 26 chr2 22733452 22734149 -227953705 - MER21B LTR ERV1 -58 805 55 183 246 0 0 chr2 22734340 22734397 -227953457 + CT-rich Low_complexity Low_complexity 1 57 0 347 315 64 84 chr2 22734584 22734930 -227952924 - L2 LINE L2 -2 3270 2932 761 272 18 13 chr2 22735009 22735233 -227952621 - MIR SINE MIR -1 261 37 322 251 67 41 chr2 22735352 22735547 -227952307 + Charlie7 DNA MER1_type 2408 2607 -5 869 184 6 13 chr2 22735559 22735717 -227952137 + MER5A DNA MER1_type 1 157 -32 1697 206 51 49 chr2 22736459 22736950 -227950904 - Charlie4a DNA MER1_type 0 508 17 317 326 34 0 chr2 22737394 22737483 -227950371 - MIR3 SINE MIR -19 189 98 1070 240 27 30 chr2 22737485 22737781 -227950073 - MLT1H1 LTR MaLR -2 553 259 459 273 13 27 chr2 22737820 22737970 -227949884 - MLT1H1 LTR MaLR -407 148 1 469 281 75 100 chr2 22737970 22738319 -227949535 - MLT1H1-int LTR MaLR 0 1371 1032 7710 133 25 14 chr2 22738864 22739538 -227948316 - L1MA2 LINE L1 0 7723 7058 3414 82 13 27 chr2 22739538 22739988 -227947866 - MLT2A1 LTR ERVL 0 444 1 7710 133 25 14 chr2 22739988 22741628 -227946226 - L1MA2 LINE L1 -665 7058 5383 4886 183 18 45 chr2 22741624 22742562 -227945292 - L1MA2 LINE L1 -6575 990 79 * 2648 93 128 2 chr2 22742562 22742960 -227944894 + LTR7 LTR ERV1 1 448 -2 4886 183 18 45 chr2 22742960 22743025 -227944829 - L1MA2 LINE L1 -7486 79 14 341 331 24 8 chr2 22744085 22744209 -227943645 - MIR SINE MIR -60 148 23 430 278 137 50 chr2 22744364 22744663 -227943191 - L2 LINE L2 -1 3312 2988 2675 125 5 8 chr2 22744688 22745064 -227942790 + THE1C LTR MaLR 1 375 0 539 233 43 0 chr2 22745082 22745198 -227942656 + MER45A DNA AcHobo 58 178 0 517 276 192 13 chr2 22745199 22745473 -227942381 - L2 LINE L2 -318 2995 2674 24 53 0 0 chr2 22745986 22746024 -227941830 + AT_rich Low_complexity Low_complexity 1 38 0 823 176 28 0 chr2 22746379 22746542 -227941312 + FRAM SINE Alu 1 166 0 183 342 60 68 chr2 22746552 22746669 -227941185 - MIR SINE MIR -73 135 20 1747 220 151 21 chr2 22746833 22747744 -227940110 + L1MC4 LINE L1 5127 6163 -21 550 239 0 67 chr2 22749163 22749343 -227938511 + L2 LINE L2 3137 3304 -9 354 338 101 44 chr2 22749431 22749978 -227937876 - L2 LINE L2 -20 3252 2674 465 302 34 39 chr2 22750982 22751161 -227936693 + MIR3 SINE MIR 21 198 -10 480 303 45 90 chr2 22751494 22751761 -227936093 - L2 LINE L2 -4 3268 3014 233 275 77 50 chr2 22751983 22752165 -227935689 - L1ME LINE L1 -240 5881 5695 243 0 0 0 chr2 22752280 22752307 -227935547 + (TG)n Simple_repeat Simple_repeat 2 28 0 216 323 0 0 chr2 22752344 22752406 -227935448 - MIR SINE MIR -18 244 183 600 224 0 0 chr2 22752776 22752892 -227934962 - MER94 DNA DNA -6 128 13 679 252 97 26 chr2 22755243 22755469 -227932385 + MIR SINE MIR 21 262 0 251 288 150 0 chr2 22755584 22755664 -227932190 + L2 LINE L2 3160 3251 -21 433 241 35 64 chr2 22756664 22756805 -227931049 - MIR3 SINE MIR -3 205 69 275 286 53 105 chr2 22756984 22757117 -227930737 + MIR3 SINE MIR 44 169 -39 861 249 23 0 chr2 22757119 22757296 -227930558 - MER5A DNA MER1_type 0 189 9 1227 180 78 32 chr2 22757990 22758349 -227929505 + MSTC LTR MaLR 1 428 0 320 224 0 0 chr2 22759256 22759323 -227928531 + L1MB2 LINE L1 6069 6135 -36 771 175 8 0 chr2 22759342 22759468 -227928386 + L1MB5 LINE L1 6040 6166 -8 246 62 0 0 chr2 22759486 22759518 -227928336 + (CA)n Simple_repeat Simple_repeat 2 33 0 251 280 134 19 chr2 22759650 22759807 -227928047 + L2 LINE L2 665 839 -2475 202 250 26 0 chr2 22760651 22760727 -227927127 + (TA)n Simple_repeat Simple_repeat 1 78 0 2727 133 36 83 chr2 22760788 22761291 -227926563 - MLT2B1 LTR ERVL -41 479 1 276 137 0 0 chr2 22761301 22761352 -227926502 + (TA)n Simple_repeat Simple_repeat 2 52 0 1198 171 0 38 chr2 22761353 22761563 -227926291 - AluJb SINE Alu -23 289 88 683 229 91 97 chr2 22761642 22761878 -227925976 + MER46C DNA MER2_type 1 236 -102 316 0 0 43 chr2 22761878 22761924 -227925930 + (TG)n Simple_repeat Simple_repeat 2 45 0 683 229 91 97 chr2 22761924 22762027 -227925827 + MER46C DNA MER2_type 236 338 0 2027 171 42 21 chr2 22762233 22762449 -227925405 + MLT1B LTR MaLR 4 233 -157 2153 107 19 105 chr2 22762449 22762859 -227924995 - THE1C LTR MaLR 0 375 1 2027 171 42 21 chr2 22762859 22763021 -227924833 + MLT1B LTR MaLR 233 390 0 37 39 0 0 chr2 22763956 22764007 -227923847 + AT_rich Low_complexity Low_complexity 1 51 0 2363 73 3 13 chr2 22764657 22764960 -227922894 - AluSp SINE Alu -13 300 1 2238 245 61 11 chr2 22766450 22767006 -227920848 - MLT1E LTR MaLR -8 585 2 183 42 0 0 chr2 22768275 22768299 -227919555 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 228 333 14 62 chr2 22768369 22768513 -227919341 + MIR SINE MIR 41 177 -85 376 230 58 0 chr2 22769999 22770086 -227917768 + MER5A DNA MER1_type 16 107 -82 3150 168 59 35 chr2 22771215 22772144 -227915710 - L1MA9 LINE L1 -659 5653 4690 1562 168 0 21 chr2 22772126 22772417 -227915437 + L1MA9 LINE L1 5636 5920 -392 * 245 278 22 0 chr2 22773664 22773754 -227914100 + L1ME LINE L1 5770 5861 -260 33 25 0 0 chr2 22773849 22773889 -227913965 + AT_rich Low_complexity Low_complexity 1 40 0 243 88 0 0 chr2 22774021 22774055 -227913799 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 313 321 22 22 chr2 22775021 22775158 -227912696 + MIR SINE MIR 36 172 -90 1234 234 49 25 chr2 22775159 22775593 -227912261 + MER74C LTR ERVL 4 591 -31 2270 113 0 0 chr2 22775683 22775984 -227911870 + AluSx SINE Alu 1 301 -11 301 317 139 19 chr2 22776104 22776464 -227911390 + MLT1J2 LTR MaLR 24 426 -24 2641 250 110 87 chr2 22776758 22777501 -227910353 + L1ME1 LINE L1 34 759 -5476 869 64 112 0 chr2 22777501 22777626 -227910228 + MER85 DNA T2_type 1 139 0 2641 250 110 87 chr2 22777626 22778352 -227909502 + L1ME1 LINE L1 759 1468 -4767 2262 91 7 0 chr2 22778352 22778638 -227909216 + AluSg SINE Alu 1 288 -22 2641 250 110 87 chr2 22778638 22779156 -227908698 + L1ME1 LINE L1 1468 1973 -4262 414 255 52 83 chr2 22779156 22779348 -227908506 - MER5A DNA MER1_type -1 188 3 2641 250 110 87 chr2 22779348 22780787 -227907067 + L1ME1 LINE L1 1973 3379 -2856 597 69 0 35 chr2 22780787 22780874 -227906980 - AluSc SINE Alu -6 303 220 2641 250 110 87 chr2 22780874 22781350 -227906504 + L1ME1 LINE L1 3379 3843 -2392 2395 92 3 0 chr2 22781350 22781653 -227906201 - AluSc SINE Alu -5 304 1 2641 250 110 87 chr2 22781653 22781865 -227905989 + L1ME1 LINE L1 3843 4049 -2186 1520 192 0 8 chr2 22781865 22782131 -227905723 + AluJo SINE Alu 1 264 -48 2641 250 110 87 chr2 22782131 22784019 -227903835 + L1ME1 LINE L1 4049 6216 -19 444 320 70 10 chr2 22784418 22784618 -227903236 + MIR SINE MIR 47 258 -4 48 43 0 0 chr2 22784766 22784835 -227903019 + AT_rich Low_complexity Low_complexity 1 69 0 425 237 58 36 chr2 22786159 22786298 -227901556 + MLT1J2 LTR MaLR 67 208 -242 383 163 0 62 chr2 22786429 22786509 -227901345 + MLT1I LTR MaLR 335 409 0 214 303 22 22 chr2 22786798 22786887 -227900967 - MIR SINE MIR -115 147 59 453 240 97 40 chr2 22787780 22787955 -227899899 + MIR SINE MIR 29 213 -49 203 194 0 0 chr2 22787955 22787991 -227899863 + (TA)n Simple_repeat Simple_repeat 1 36 0 301 175 0 18 chr2 22788137 22788194 -227899660 + L2 LINE L2 3254 3309 -4 278 241 17 0 chr2 22788571 22788629 -227899225 - L3 LINE CR1 -7 1570 1512 6496 140 55 27 chr2 22789016 22789621 -227898233 - Tigger3b DNA MER2_type -1797 1231 645 2235 107 7 0 chr2 22789621 22789919 -227897935 + AluSx SINE Alu 1 300 -12 6496 140 55 27 chr2 22789919 22789948 -227897906 - Tigger3b DNA MER2_type -2383 645 618 246 32 0 0 chr2 22789948 22789979 -227897875 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6496 140 55 27 chr2 22789979 22790016 -227897838 - Tigger3b DNA MER2_type -2410 618 584 2611 33 3 3 chr2 22790016 22790317 -227897537 + AluY SINE Alu 1 301 -10 6496 140 55 27 chr2 22790317 22790840 -227897014 - Tigger3b DNA MER2_type -2444 584 1 255 157 0 0 chr2 22791468 22791519 -227896335 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 688 295 23 27 chr2 22795934 22796192 -227891662 - MIR SINE MIR 0 262 6 2086 107 30 10 chr2 22796284 22796584 -227891270 + AluSx SINE Alu 1 306 -6 323 265 166 11 chr2 22796720 22796901 -227890953 + MIR SINE MIR 31 239 -23 913 229 99 103 chr2 22798245 22798582 -227889272 - MLT1J2 LTR MaLR -16 434 98 1871 130 121 18 chr2 22798582 22798912 -227888942 + THE1B LTR MaLR 1 364 0 913 229 99 103 chr2 22798912 22799010 -227888844 - MLT1J2 LTR MaLR -352 98 1 186 186 93 0 chr2 22799010 22799053 -227888801 - L2 LINE L2 -218 3054 3008 1357 169 87 85 chr2 22799936 22800314 -227887540 - MLT1B LTR MaLR -11 379 1 1354 199 81 46 chr2 22801110 22801481 -227886373 + L1MA10 LINE L1 5943 6326 -8 2259 90 21 0 chr2 22801481 22801792 -227886062 - AluY SINE Alu 0 317 1 692 271 96 9 chr2 22802312 22802541 -227885313 - MLT1J2 LTR MaLR 0 450 202 440 221 139 0 chr2 22802571 22802693 -227885161 - MLT1J2 LTR MaLR -307 143 5 1039 176 62 59 chr2 22803807 22804096 -227883758 + MER33 DNA MER1_type 35 324 0 617 245 101 43 chr2 22804097 22804305 -227883549 + MIR SINE MIR 32 251 -11 195 100 0 0 chr2 22806050 22806080 -227881774 + (CA)n Simple_repeat Simple_repeat 2 31 0 1179 215 32 3 chr2 22807299 22807732 -227880122 + Charlie4a DNA MER1_type 21 495 -13 2160 112 3 26 chr2 22807931 22808234 -227879620 + AluSx SINE Alu 1 296 -16 248 348 37 18 chr2 22809778 22809942 -227877912 - L2 LINE L2 -202 3070 2904 256 327 109 0 chr2 22810177 22810287 -227877567 - L2 LINE L2 -962 2352 2231 222 268 73 24 chr2 22810391 22810473 -227877381 - MIR3 SINE MIR -11 197 112 22 35 0 0 chr2 22812456 22812485 -227875369 + AT_rich Low_complexity Low_complexity 1 29 0 502 243 25 55 chr2 22813176 22813378 -227874476 + L2 LINE L2 3109 3304 -9 1308 211 39 3 chr2 22813381 22813666 -227874188 + AluJo SINE Alu 1 295 -17 539 280 92 13 chr2 22814935 22815174 -227872680 + MIR SINE MIR 3 260 -2 2539 143 30 39 chr2 22816512 22816980 -227870874 - MLT2C2 LTR ERVL 0 464 1 1543 176 117 6 chr2 22818218 22818542 -227869312 - MER46B DNA MER2_type 0 236 2 292 183 97 65 chr2 22818472 22818565 -227869289 + MER46A DNA MER2_type 75 170 -66 * 908 183 0 33 chr2 22818588 22818768 -227869086 - AluJb SINE Alu -2 310 137 472 325 74 15 chr2 22819233 22819436 -227868418 - MIR SINE MIR 0 262 48 519 226 0 0 chr2 22821287 22821446 -227866408 + (TCCA)n Simple_repeat Simple_repeat 2 160 0 445 229 8 0 chr2 22821603 22821721 -227866133 + MIR SINE MIR 79 197 -65 238 246 31 15 chr2 22821723 22821788 -227866066 - MER113 DNA MER1_type? -1 520 455 1979 250 83 37 chr2 22821901 22822553 -227865301 + L1ME3A LINE L1 5208 5908 -262 1294 210 105 9 chr2 22822553 22822886 -227864968 - MLT1A1 LTR MaLR 0 365 1 1979 250 83 37 chr2 22822886 22823065 -227864789 + L1ME3A LINE L1 5908 6077 -93 789 298 28 0 chr2 22823245 22823463 -227864391 - MIR SINE MIR -37 225 2 345 47 0 0 chr2 22824886 22824929 -227862925 + (CA)n Simple_repeat Simple_repeat 2 44 0 182 267 0 0 chr2 22825305 22825350 -227862504 + L2 LINE L2 3207 3251 -21 232 384 82 7 chr2 22827343 22827489 -227860365 - MIR3 SINE MIR -23 185 29 1734 148 80 45 chr2 22827509 22827886 -227859968 + MLT1B LTR MaLR 1 390 0 547 293 6 6 chr2 22828079 22828253 -227859601 - MIR SINE MIR -85 177 4 320 319 12 62 chr2 22828255 22828366 -227859488 + L3 LINE CR1 1425 1527 -50 2364 117 0 0 chr2 22828366 22828675 -227859179 - AluSq SINE Alu -4 309 1 320 319 12 62 chr2 22828675 22828723 -227859131 + L3 LINE CR1 1527 1576 -1 348 24 0 0 chr2 22830122 22830163 -227857691 + (CCA)n Simple_repeat Simple_repeat 2 42 0 314 289 37 15 chr2 22830393 22830528 -227857326 - MIR3 SINE MIR -63 145 8 187 254 18 55 chr2 22831222 22831332 -227856522 + L2 LINE L2 2855 2960 -312 21 0 0 0 chr2 22831955 22831976 -227855878 + AT_rich Low_complexity Low_complexity 1 21 0 2283 110 0 25 chr2 22832632 22832950 -227854904 - AluSx SINE Alu -2 310 1 2373 162 24 75 chr2 22833365 22833824 -227854030 + MLT1D LTR MaLR 1 431 -74 3771 81 2 2 chr2 22833824 22834320 -227853534 - L1PA13 LINE L1 -3 6160 5665 2373 162 24 75 chr2 22834320 22834392 -227853462 + MLT1D LTR MaLR 431 505 0 597 294 13 0 chr2 22834392 22834545 -227853309 - MIR SINE MIR -106 156 2 2543 185 69 42 chr2 22834739 22835319 -227852535 + L1MB5 LINE L1 5535 6133 -41 4283 51 2 6 chr2 22835319 22835848 -227852006 + L1PA8 LINE L1 5639 6165 -7 2543 185 69 42 chr2 22835848 22835879 -227851975 + L1MB5 LINE L1 6133 6162 -12 2328 175 8 25 chr2 22835884 22836359 -227851495 - L1MB5 LINE L1 -173 6001 5535 372 0 0 60 chr2 22836372 22836422 -227851432 + L1PA8 LINE L1 6120 6166 -6 23 0 0 0 chr2 22836443 22836466 -227851388 + AT_rich Low_complexity Low_complexity 1 23 0 219 309 12 25 chr2 22836488 22836569 -227851285 - L2 LINE L2 -219 3053 2974 273 333 67 0 chr2 22837968 22838073 -227849781 - MIR SINE MIR -10 252 141 395 286 234 5 chr2 22838344 22838536 -227849318 + MIR SINE MIR 10 245 -17 1178 284 95 39 chr2 22838607 22839330 -227848524 + L2 LINE L2 2140 2903 -411 915 196 60 25 chr2 22839368 22839506 -227848348 - Charlie4a DNA MER1_type -1460 501 369 834 138 22 7 chr2 22839506 22839644 -227848210 + L1MC1 LINE L1 6193 6332 -1 915 196 60 25 chr2 22839644 22839810 -227848044 - Charlie4a DNA MER1_type -1592 369 141 204 40 0 0 chr2 22840520 22840545 -227847309 + (ATG)n Simple_repeat Simple_repeat 3 27 0 213 264 231 0 chr2 22840557 22840648 -227847206 - MIR SINE MIR -44 218 107 219 222 0 0 chr2 22841124 22841169 -227846685 + (TTAGGG)n Simple_repeat Simple_repeat 3 47 0 378 42 0 0 chr2 22841795 22841843 -227846011 + (A)n Simple_repeat Simple_repeat 1 48 0 1619 130 163 71 chr2 22842133 22842525 -227845329 + MSTA LTR MaLR 1 428 0 216 232 137 32 chr2 22842748 22842843 -227845011 + MIR SINE MIR 41 145 -63 410 321 177 18 chr2 22843679 22843956 -227843898 - MLT1J2 LTR MaLR -49 401 81 329 286 10 10 chr2 22844158 22844256 -227843598 + MER8 DNA MER2_type 1 98 -141 568 224 196 83 chr2 22846055 22846453 -227841401 - MLT1J LTR MaLR -54 457 15 321 155 0 0 chr2 22846888 22846946 -227840908 + GA-rich Low_complexity Low_complexity 4 61 0 183 236 73 0 chr2 22847585 22847640 -227840214 - MIR3 SINE MIR -15 193 135 320 108 215 0 chr2 22848875 22848940 -227838914 - MADE1 DNA Mariner -1 79 1 1825 176 76 58 chr2 22849649 22850098 -227837756 + MLT1C LTR MaLR 3 459 -8 471 35 0 0 chr2 22850283 22850340 -227837514 + (CA)n Simple_repeat Simple_repeat 2 58 0 2101 138 3 0 chr2 22850443 22850734 -227837120 - AluJb SINE Alu -20 292 1 231 284 39 20 chr2 22853325 22853427 -227834427 - MER5B DNA MER1_type -57 121 18 385 299 8 8 chr2 22854178 22854295 -227833559 + MER5B DNA MER1_type 3 119 -59 2345 85 3 3 chr2 22854405 22854698 -227833156 + AluSp SINE Alu 1 293 -20 2196 153 18 10 chr2 22854825 22855212 -227832642 + MLT1B LTR MaLR 1 390 0 31 0 0 0 chr2 22855818 22855849 -227832005 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 22856516 22856538 -227831316 + AT_rich Low_complexity Low_complexity 1 22 0 218 31 0 31 chr2 22856763 22856795 -227831059 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 655 245 80 0 chr2 22857228 22857379 -227830475 + MER96 DNA MER1_type? 12 174 -1 281 341 16 16 chr2 22857690 22857819 -227830035 + L2 LINE L2 2571 2699 -615 * 864 247 6 0 chr2 22857804 22857982 -227829872 + MER5A DNA MER1_type 11 189 0 215 130 0 87 chr2 22859612 22859658 -227828196 + L2 LINE L2 3231 3272 0 193 298 114 46 chr2 22860373 22860635 -227827219 - L2 LINE L2 -832 2482 2203 385 276 69 21 chr2 22861878 22862023 -227825831 + L2 LINE L2 3162 3313 0 197 211 66 26 chr2 22863118 22863194 -227824660 + MIR SINE MIR 103 181 -81 444 248 35 64 chr2 22863881 22864083 -227823771 + L1MC5 LINE L1 7698 7893 -68 21 0 0 0 chr2 22864178 22864199 -227823655 + AT_rich Low_complexity Low_complexity 1 21 0 286 287 116 53 chr2 22867482 22868145 -227819709 - L1M4 LINE L1 -1556 4590 3886 1229 255 41 11 chr2 22868595 22868964 -227818890 + L1M4 LINE L1 4724 5103 -1043 * 7424 234 62 20 chr2 22868962 22871400 -227816454 - L1M4c LINE L1 -1641 5316 2819 1696 111 15 0 chr2 22871400 22871662 -227816192 - L1MA2 LINE L1 0 6304 6039 7424 234 62 20 chr2 22871662 22871747 -227816107 - L1M4c LINE L1 -4138 2819 2739 328 22 0 0 chr2 22872027 22872072 -227815782 - AluY SINE Alu 0 300 256 6885 232 55 28 chr2 22872167 22874617 -227813237 - L1M4c LINE L1 -4453 2685 9 1742 197 42 3 chr2 22875542 22875877 -227811977 + MER7A DNA MER2_type 1 346 0 439 270 40 16 chr2 22876508 22876634 -227811220 + L2 LINE L2 3180 3308 -5 2291 138 19 50 chr2 22877020 22877396 -227810458 - THE1B LTR MaLR 0 364 1 12083 98 22 5 chr2 22877396 22878949 -227808905 - THE1B-int LTR MaLR 0 1580 1 2360 115 33 36 chr2 22878949 22879314 -227808540 - THE1B LTR MaLR 0 364 1 225 178 0 0 chr2 22879408 22879453 -227808401 + GA-rich Low_complexity Low_complexity 1 45 0 1962 180 44 31 chr2 22879457 22879993 -227807861 + MLT2A2 LTR ERVL 5 554 0 425 188 0 10 chr2 22880000 22880096 -227807758 + GA-rich Low_complexity Low_complexity 3 97 0 21 0 0 0 chr2 22880573 22880594 -227807260 + AT_rich Low_complexity Low_complexity 1 21 0 408 20 0 0 chr2 22880625 22880674 -227807180 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 545 308 43 0 chr2 22881904 22882089 -227805765 - MIR SINE MIR -21 241 49 428 351 53 61 chr2 22883310 22883669 -227804185 - L2 LINE L2 -14 3258 2903 452 275 106 25 chr2 22884891 22885051 -227802803 + MIR SINE MIR 8 180 -82 269 246 18 109 chr2 22885438 22885548 -227802306 - MIR SINE MIR -56 206 107 25 31 0 0 chr2 22888227 22888259 -227799595 + AT_rich Low_complexity Low_complexity 1 32 0 3892 245 41 8 chr2 22888690 22889747 -227798107 - L1M4 LINE L1 -1612 4534 3443 2334 216 55 24 chr2 22889748 22889975 -227797879 + L1M2 LINE L1 1547 1765 -5084 1864 181 0 6 chr2 22889975 22890289 -227797565 + AluJb SINE Alu 1 312 0 2334 216 55 24 chr2 22890289 22890733 -227797121 + L1M2 LINE L1 1765 2239 -4610 363 265 0 10 chr2 22890719 22890814 -227797040 + L1PB4 LINE L1 6054 6149 -7 * 955 68 0 0 chr2 22890814 22890931 -227796923 + L1PA10 LINE L1 6050 6166 -2 5003 226 40 13 chr2 22890953 22892134 -227795720 - L1MCb LINE L1 -4851 1194 3 190 261 87 0 chr2 22892149 22892195 -227795659 + MIR SINE MIR 97 146 -116 964 218 9 28 chr2 22894864 22895080 -227792774 + MIR SINE MIR 41 252 -10 5563 105 13 20 chr2 22898405 22899233 -227788621 - L1PA10 LINE L1 -3 6165 5344 7968 119 13 1 chr2 22899335 22900521 -227787333 - L1PA10 LINE L1 -873 5273 4074 265 326 56 21 chr2 22903322 22903466 -227784388 - L3 LINE CR1 -142 1435 1287 730 159 24 0 chr2 22903540 22903666 -227784188 - LTR40a LTR ERVL 0 519 391 579 329 81 0 chr2 22903989 22904199 -227783655 - MIR SINE MIR 0 262 36 237 360 83 12 chr2 22904557 22904732 -227783122 + MIR SINE MIR 25 211 -51 2340 113 0 3 chr2 22905296 22905606 -227782248 + AluSx SINE Alu 1 309 -3 369 0 0 0 chr2 22905631 22905672 -227782182 + (CA)n Simple_repeat Simple_repeat 2 42 0 192 341 66 0 chr2 22905675 22905766 -227782088 + L3 LINE CR1 846 942 -635 468 331 54 0 chr2 22905987 22906153 -227781701 + L3 LINE CR1 964 1138 -439 1091 224 35 38 chr2 22906175 22906488 -227781366 + LTR40a LTR ERVL 1 312 -207 268 242 0 15 chr2 22906869 22906935 -227780919 + MER5B DNA MER1_type 1 65 -113 21 0 0 0 chr2 22906950 22906971 -227780883 + AT_rich Low_complexity Low_complexity 1 21 0 2406 93 19 0 chr2 22908262 22908572 -227779282 + L1PA10 LINE L1 5851 6166 -2 190 326 119 41 chr2 22908953 22909388 -227778466 + L2 LINE L2 2383 2851 -463 960 297 68 38 chr2 22909418 22909950 -227777904 + LTR67 LTR ERVL 8 555 -2 296 102 20 0 chr2 22910028 22910077 -227777777 + (CA)n Simple_repeat Simple_repeat 1 50 0 450 323 8 8 chr2 22910147 22910280 -227777574 - L2 LINE L2 0 3313 3181 189 74 0 0 chr2 22910352 22910379 -227777475 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 348 247 72 92 chr2 22911649 22911900 -227775954 + L2 LINE L2 3029 3274 -39 234 280 13 27 chr2 22911940 22912015 -227775839 - L3 LINE CR1 -654 923 850 526 148 12 0 chr2 22912021 22912102 -227775752 - AluSx SINE Alu -14 296 215 1128 136 0 0 chr2 22912103 22912257 -227775597 - AluSx SINE Alu -158 154 1 189 185 56 56 chr2 22912549 22912603 -227775251 - MIR3 SINE MIR -27 181 128 619 273 44 1 chr2 22915668 22915896 -227771958 + MIR SINE MIR 23 260 -2 183 361 31 10 chr2 22916952 22917049 -227770805 + L3 LINE CR1 984 1082 -495 305 300 94 47 chr2 22917138 22917435 -227770419 + L1ME4a LINE L1 5604 5914 -207 257 276 11 0 chr2 22917472 22917559 -227770295 + L1ME4a LINE L1 6000 6087 -34 1548 187 154 18 chr2 22917679 22918022 -227769832 - MLT1B LTR MaLR 0 390 1 948 98 11 7 chr2 22918626 22918913 -227768941 + (CA)n Simple_repeat Simple_repeat 1 288 0 730 240 54 36 chr2 22918947 22919168 -227768686 + MIR SINE MIR 37 261 -1 330 26 0 0 chr2 22919634 22919673 -227768181 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 737 212 114 10 chr2 22919814 22920007 -227767847 + LTR16A1 LTR ERVL 245 457 0 196 125 78 0 chr2 22920818 22920882 -227766972 + (CA)n Simple_repeat Simple_repeat 2 70 0 1718 178 10 3 chr2 22921561 22921859 -227765995 - AluJb SINE Alu -12 300 1 870 198 6 0 chr2 22922453 22922610 -227765244 + L1PB4 LINE L1 5968 6125 -31 434 141 28 0 chr2 22922660 22922731 -227765123 + L1PA16 LINE L1 6081 6153 -13 1837 166 30 51 chr2 22922806 22923179 -227764675 - MLT1A1 LTR MaLR 0 365 1 199 290 32 0 chr2 22923190 22923252 -227764602 + L2 LINE L2 3250 3313 0 508 317 60 33 chr2 22923987 22924287 -227763567 - L2 LINE L2 -385 2929 2622 238 289 11 22 chr2 22924819 22924909 -227762945 - MIR3 SINE MIR -4 204 116 24 53 0 0 chr2 22925575 22925613 -227762241 + AT_rich Low_complexity Low_complexity 1 38 0 270 261 65 66 chr2 22925911 22926071 -227761783 - MLT1H LTR MaLR 0 549 382 551 286 6 23 chr2 22926205 22926380 -227761474 - MLT1H LTR MaLR -329 220 49 1575 231 21 9 chr2 22926513 22926850 -227761004 + MER58B DNA MER1_type 1 341 0 962 139 61 113 chr2 22926858 22927168 -227760686 - MER33 DNA MER1_type 0 324 31 250 319 22 22 chr2 22927324 22927415 -227760439 + L2 LINE L2 3182 3272 0 785 226 39 85 chr2 22927537 22927643 -227760211 + L1ME LINE L1 33 142 -5928 1494 158 4 15 chr2 22927643 22927903 -227759951 + AluJb SINE Alu 1 257 -55 785 226 39 85 chr2 22927903 22928102 -227759752 + L1ME LINE L1 142 324 -5746 692 174 0 8 chr2 22928246 22928367 -227759487 + L2 LINE L2 3189 3308 -5 2404 152 48 33 chr2 22931240 22931700 -227756154 + MLT1C LTR MaLR 1 467 0 231 297 11 22 chr2 22931896 22931987 -227755867 + MIR SINE MIR 1 90 -172 422 254 219 12 chr2 22932655 22932824 -227755030 + MER63A DNA MER1_type 1 204 -6 289 306 41 0 chr2 22933743 22933841 -227754013 + MIR SINE MIR 43 144 -64 494 270 11 54 chr2 22934886 22935017 -227752837 - MIR SINE MIR -15 247 125 2011 121 30 3 chr2 22935017 22935314 -227752540 + AluSx SINE Alu 1 305 -7 494 270 11 54 chr2 22935314 22935367 -227752487 - MIR SINE MIR -137 125 71 643 271 134 29 chr2 22935369 22935712 -227752142 - MLT1J1 LTR MaLR 0 446 68 185 143 0 0 chr2 22935811 22935839 -227752015 - MIR SINE MIR -195 67 40 2064 242 75 17 chr2 22936332 22936866 -227750988 + MLT1F1 LTR MaLR 1 565 -2 1077 211 5 22 chr2 22937081 22937304 -227750550 + MER20B DNA MER1_type 1 219 0 986 219 149 54 chr2 22937530 22937919 -227749935 - MLT1J2 LTR MaLR -5 445 20 941 214 0 16 chr2 22939830 22940017 -227747837 + MER5A DNA MER1_type 6 189 0 408 344 56 11 chr2 22940134 22940314 -227747540 + MER91A DNA MER1_type 1 188 -8 211 353 0 0 chr2 22941380 22941448 -227746406 + GA-rich Low_complexity Low_complexity 4 71 0 456 297 22 22 chr2 22941668 22941850 -227746004 - MIR SINE MIR -69 193 12 265 220 34 0 chr2 22942077 22942136 -227745718 + L2 LINE L2 3248 3308 -5 220 307 100 14 chr2 22942163 22942303 -227745551 - MIR SINE MIR -15 247 96 1539 219 86 46 chr2 22942528 22943049 -227744805 - MLT1H1 LTR MaLR -13 542 1 546 260 154 45 chr2 22943119 22943660 -227744194 + MLT1G LTR MaLR 17 588 -2 1142 257 133 32 chr2 22944636 22945103 -227742751 + LTR33 LTR ERVL 1 514 -7 2862 9 6 0 chr2 22945551 22945874 -227741980 - L1PA2 LINE L1 0 6155 5831 2235 120 52 88 chr2 22946065 22946409 -227741445 - MSTC LTR MaLR -3 425 99 2099 128 4 0 chr2 22946409 22946690 -227741164 - AluSx SINE Alu -30 282 1 2235 120 52 88 chr2 22946690 22946786 -227741068 - MSTC LTR MaLR -329 99 1 545 303 6 11 chr2 22948241 22948419 -227739435 + MER5B DNA MER1_type 2 178 0 1748 232 32 34 chr2 22952630 22953126 -227734728 + MER20B DNA MER1_type 165 659 -124 1632 230 45 15 chr2 22953128 22953597 -227734257 + MER20B DNA MER1_type 290 772 -11 3894 221 123 62 chr2 22953841 22954071 -227733783 - L1MC4 LINE L1 -59 7983 7769 2401 77 3 32 chr2 22954071 22954383 -227733471 + AluY SINE Alu 1 303 -8 3894 221 123 62 chr2 22954383 22955588 -227732266 - L1MC4 LINE L1 -273 7769 6460 205 109 43 0 chr2 22955800 22955846 -227732008 + (TA)n Simple_repeat Simple_repeat 2 49 0 434 286 102 39 chr2 22955928 22956558 -227731296 - L1MEd LINE L1 -853 1637 884 261 0 0 0 chr2 22958025 22958054 -227729800 + (TG)n Simple_repeat Simple_repeat 2 30 0 333 0 0 0 chr2 22958454 22958491 -227729363 + (TG)n Simple_repeat Simple_repeat 2 38 0 303 283 50 25 chr2 22958698 22958857 -227728997 - MER103 DNA DNA -3 163 1 186 43 0 0 chr2 22960549 22960572 -227727282 + (T)n Simple_repeat Simple_repeat 1 23 0 406 261 87 0 chr2 22961039 22961055 -227726799 - L1MA10 LINE L1 -5 6329 6314 1251 252 46 37 chr2 22961055 22961515 -227726339 - L1ME1 LINE L1 -23 6143 5680 1180 202 11 74 chr2 22961525 22961877 -227725977 - L1MEc LINE L1 -3525 2690 2361 798 180 14 0 chr2 22961911 22962050 -227725804 - MER46A DNA MER2_type -74 162 22 457 189 31 24 chr2 22962061 22962188 -227725666 - L1MEc LINE L1 -3998 2398 2271 * 1453 239 98 0 chr2 22962172 22962540 -227725314 - L1MD2 LINE L1 -4 6355 5952 1655 215 23 5 chr2 22962544 22962934 -227724920 - L1MEc LINE L1 -2091 4124 3728 1191 207 17 20 chr2 22962916 22963264 -227724590 - L1MEc LINE L1 -4081 2315 1969 * 962 289 9 33 chr2 22963265 22963597 -227724257 - L1MEc LINE L1 -6065 331 8 516 244 262 0 chr2 22964885 22965057 -227722797 - MIR SINE MIR -45 217 1 641 247 123 67 chr2 22965242 22965512 -227722342 + MLT1J2 LTR MaLR 67 320 -89 991 215 34 130 chr2 22965512 22965926 -227721928 + MLT1A2 LTR MaLR 1 374 0 641 247 123 67 chr2 22965926 22966022 -227721832 + MLT1J2 LTR MaLR 320 409 0 243 298 0 0 chr2 22966231 22966315 -227721539 + MIR3 SINE MIR 116 199 -9 218 284 118 120 chr2 22967845 22968261 -227719593 + L2 LINE L2 2853 3267 -5 261 0 0 0 chr2 22968318 22968347 -227719507 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 342 0 0 0 chr2 22968346 22968384 -227719470 + (TA)n Simple_repeat Simple_repeat 1 38 0 207 0 0 0 chr2 22968627 22968650 -227719204 + (T)n Simple_repeat Simple_repeat 1 23 0 373 302 22 22 chr2 22969811 22969950 -227717904 - MIR SINE MIR -85 177 39 180 291 102 47 chr2 22970103 22970186 -227717668 - MER5A DNA MER1_type -22 167 73 2313 97 0 0 chr2 22970186 22970476 -227717378 - AluSc SINE Alu -19 290 1 180 291 102 47 chr2 22970476 22970519 -227717335 - MER5A DNA MER1_type -116 73 34 196 267 13 53 chr2 22970640 22970715 -227717139 - L3 LINE CR1 -166 1411 1340 343 316 15 0 chr2 22970740 22970873 -227716981 - MIR SINE MIR 0 262 128 1025 125 6 6 chr2 22971097 22971257 -227716597 + L1PA10 LINE L1 5998 6157 -11 341 278 119 0 chr2 22972331 22972457 -227715397 + MIR3 SINE MIR 47 187 -21 1995 137 139 36 chr2 22976155 22976543 -227711311 + MSTA LTR MaLR 1 428 0 630 307 62 8 chr2 22977649 22977890 -227709964 - L3b LINE CR1 -24 1559 1306 25 0 0 0 chr2 22979242 22979267 -227708587 + AT_rich Low_complexity Low_complexity 1 25 0 2550 60 0 0 chr2 22979272 22979572 -227708282 - AluY SINE Alu -11 300 1 200 228 38 51 chr2 22979797 22979876 -227707978 - L2 LINE L2 -13 3259 3182 2410 214 37 39 chr2 22979895 22980517 -227707337 + MLT1E3 LTR MaLR 4 624 0 269 249 193 67 chr2 22980685 22980970 -227706884 - L2 LINE L2 -356 2958 2638 1175 145 100 10 chr2 22981082 22981282 -227706572 + MSTA LTR MaLR 211 428 0 1346 227 82 51 chr2 22981282 22981816 -227706038 + L1ME LINE L1 500 1050 -5155 * 2498 202 41 117 chr2 22981808 22982238 -227705616 + L1ME1 LINE L1 4212 4673 -1473 300 116 0 0 chr2 22982238 22982281 -227705573 + tRNA-Phe-TTC tRNA tRNA 2 44 -32 2498 202 41 117 chr2 22982281 22982880 -227704974 + L1ME1 LINE L1 4673 5202 -944 41174 71 6 8 chr2 22982882 22989031 -227698823 + L1PA5 LINE L1 5 6153 -1 2944 220 71 24 chr2 22989024 22989360 -227698494 + L1ME1 LINE L1 5188 5507 -659 * 2283 114 0 16 chr2 22989360 22989675 -227698179 - AluSq SINE Alu -3 310 1 2944 220 71 24 chr2 22989675 22990269 -227697585 + L1ME1 LINE L1 5507 6160 -6 496 250 77 42 chr2 22990282 22990542 -227697312 + L1ME LINE L1 1018 1286 -4929 4358 166 59 32 chr2 22990544 22991067 -227696787 + L1MB1 LINE L1 5146 5713 -476 1709 193 7 0 chr2 22991067 22991362 -227696492 - AluJo SINE Alu -15 297 1 4358 166 59 32 chr2 22991362 22991823 -227696031 + L1MB1 LINE L1 5713 6160 -29 757 199 9 87 chr2 22991900 22991944 -227695910 + L1ME LINE L1 2020 2066 -4330 1214 170 58 0 chr2 22991944 22992150 -227695704 - MER20 DNA MER1_type 0 219 2 270 0 0 0 chr2 22992155 22992185 -227695669 + (CA)n Simple_repeat Simple_repeat 1 30 0 757 199 9 87 chr2 22992185 22992330 -227695524 + L1ME LINE L1 2070 2181 -4215 2137 159 81 8 chr2 22992330 22992727 -227695127 + MSTB LTR MaLR 1 426 0 757 199 9 87 chr2 22992727 22992862 -227694992 + L1ME LINE L1 2181 2325 -4071 1005 85 8 0 chr2 22992865 22992994 -227694860 + AluY SINE Alu 1 130 -181 1255 222 36 47 chr2 22992995 22993031 -227694823 + L1ME LINE L1 2284 2319 -3896 2595 66 0 0 chr2 22993031 22993334 -227694520 + AluY SINE Alu 1 303 -8 1255 222 36 47 chr2 22993334 22993662 -227694192 + L1ME LINE L1 2319 2644 -3571 416 304 12 31 chr2 22993843 22994004 -227693850 - MER5B DNA MER1_type 0 178 21 210 358 58 7 chr2 22994120 22994257 -227693597 - L3 LINE CR1 -701 876 733 326 335 157 12 chr2 22994422 22994741 -227693113 + L2 LINE L2 2944 3308 -5 184 297 62 0 chr2 22994951 22995015 -227692839 - MIR SINE MIR -108 154 87 1737 163 19 26 chr2 22995608 22995921 -227691933 - AluJo SINE Alu -1 311 1 2006 126 3 21 chr2 22996242 22996556 -227691298 - AluSx SINE Alu 0 309 1 419 276 15 15 chr2 22996627 22996761 -227691093 + MER5B DNA MER1_type 45 178 0 616 231 17 52 chr2 22998799 22998972 -227688882 - MER91B DNA MER1_type -5 185 19 183 377 44 0 chr2 22999428 22999542 -227688312 - MIR SINE MIR -55 153 35 309 333 20 20 chr2 23000004 23000154 -227687700 - MIR SINE MIR -112 150 1 252 59 0 0 chr2 23000223 23000257 -227687597 + (ATG)n Simple_repeat Simple_repeat 3 36 0 324 0 0 0 chr2 23001274 23001310 -227686544 + (A)n Simple_repeat Simple_repeat 1 36 0 541 291 100 33 chr2 23002793 23003064 -227684790 - MER102a DNA MER1_type -3 327 39 236 224 17 0 chr2 23003355 23003413 -227684441 - LTR66 LTR ERVL -154 456 398 404 288 100 17 chr2 23003463 23003703 -227684151 - L2 LINE L2 -761 2553 2294 581 259 41 12 chr2 23005090 23005260 -227682594 + L1MCc LINE L1 26 200 -6223 763 256 66 36 chr2 23005944 23006374 -227681480 + L1MCc LINE L1 1129 1570 -4852 1051 245 109 85 chr2 23006652 23007344 -227680510 + L1MCc LINE L1 1864 2582 -4540 216 0 0 0 chr2 23007344 23007368 -227680486 + (CA)n Simple_repeat Simple_repeat 2 25 0 1051 245 109 85 chr2 23007368 23007524 -227680330 + L1MCc LINE L1 2582 2733 -4389 2327 135 3 6 chr2 23007526 23007888 -227679966 - MER46B DNA MER2_type 0 236 1 3589 269 74 15 chr2 23007963 23009638 -227678216 + L1MCc LINE L1 2747 4464 -2477 779 261 9 18 chr2 23009656 23009882 -227677972 - MIR SINE MIR -36 226 3 189 74 0 0 chr2 23011004 23011031 -227676823 + (TC)n Simple_repeat Simple_repeat 2 28 0 942 267 67 54 chr2 23011180 23011715 -227676139 + MER34 LTR ERV1 1 542 0 44106 30 23 2 chr2 23012475 23018085 -227669769 - L1P1 LINE L1 -424 5731 2 371 224 102 68 chr2 23019786 23019933 -227667921 + MER5A DNA MER1_type 1 152 -37 21 36 0 0 chr2 23020800 23020828 -227667026 + AT_rich Low_complexity Low_complexity 1 28 0 295 132 13 92 chr2 23020945 23021021 -227666833 - L2 LINE L2 0 3272 3203 1874 159 23 7 chr2 23021109 23021417 -227666437 - AluSq SINE Alu 0 313 1 1034 131 258 4 chr2 23021835 23022087 -227665767 + Charlie1 DNA MER1_type 2310 2625 -136 2019 110 7 7 chr2 23022176 23022488 -227665366 - AluY SINE Alu 0 312 1 1145 185 17 98 chr2 23023870 23024060 -227663794 - MER33 DNA MER1_type -2266 319 168 2262 136 0 0 chr2 23024060 23024370 -227663484 - AluSx SINE Alu -2 310 1 1145 185 17 98 chr2 23024370 23024525 -227663329 - MER33 DNA MER1_type -2417 168 2 181 391 25 6 chr2 23025681 23025842 -227662012 - L2 LINE L2 -194 3078 2915 2162 178 8 13 chr2 23028009 23028396 -227659458 - MLT1B LTR MaLR 0 390 6 209 229 107 71 chr2 23033854 23033921 -227653933 - MIR3 SINE MIR -37 171 108 2061 147 0 0 chr2 23033921 23034221 -227653633 + AluJo SINE Alu 2 301 -11 209 229 107 71 chr2 23034221 23034293 -227653561 - MIR3 SINE MIR -100 108 27 254 250 65 19 chr2 23039369 23039477 -227648377 - L1ME LINE L1 -279 6236 6124 194 374 130 0 chr2 23039503 23039618 -227648236 + MIR SINE MIR 14 143 -119 1019 186 0 0 chr2 23039632 23039793 -227648061 + FAM SINE Alu 9 169 -16 2454 83 0 0 chr2 23039798 23040099 -227647755 + AluSg SINE Alu 1 301 -9 7976 246 81 28 chr2 23040352 23042242 -227645612 + L1MEc LINE L1 42 1831 -4384 665 238 4 144 chr2 23042242 23042326 -227645528 + MER58A DNA MER1_type 4 98 -2322 2224 105 10 3 chr2 23042326 23042630 -227645224 + AluSq SINE Alu 1 306 -7 665 238 4 144 chr2 23042630 23042801 -227645053 + MER58A DNA MER1_type 98 223 -1 7976 246 81 28 chr2 23042801 23045281 -227642573 + L1MEc LINE L1 1831 4179 -2036 2333 103 0 0 chr2 23045281 23045581 -227642273 + AluSg SINE Alu 1 300 -10 7976 246 81 28 chr2 23045581 23046002 -227641852 + L1MEc LINE L1 4179 4576 -1639 2115 132 3 0 chr2 23046002 23046305 -227641549 + AluSx SINE Alu 1 304 -8 7976 246 81 28 chr2 23046305 23046505 -227641349 + L1MEc LINE L1 4576 5268 -947 303 308 68 34 chr2 23046663 23046929 -227640925 - L1ME LINE L1 -551 5964 5690 230 244 52 93 chr2 23046959 23047152 -227640702 - L1ME4a LINE L1 -132 5989 5805 207 0 0 0 chr2 23049213 23049236 -227638618 + (CTG)n Simple_repeat Simple_repeat 1 23 0 347 242 95 87 chr2 23049410 23049662 -227638192 + HAL1b LINE L1 80 333 -1015 622 121 61 96 chr2 23099707 23099905 -227587949 - AluY SINE Alu -117 194 4 2893 249 68 32 chr2 23099926 23101319 -227586535 - L1MEc LINE L1 -2739 3801 2399 383 211 18 165 chr2 23101338 23101379 -227586475 - MER58C DNA MER1_type -2207 213 168 2307 104 0 0 chr2 23101379 23101678 -227586176 + AluSc SINE Alu 1 299 -10 383 211 18 165 chr2 23101678 23101854 -227586000 - MER58C DNA MER1_type -2252 168 28 2397 128 13 10 chr2 23102241 23102631 -227585223 - L1PB3 LINE L1 -7 6147 5757 355 217 57 9 chr2 23102645 23102751 -227585103 - L1MEc LINE L1 -4578 1962 1852 1255 169 56 63 chr2 23102871 23102918 -227584936 + MLT1A1 LTR MaLR 49 95 -270 611 52 39 0 chr2 23102918 23102995 -227584859 + MADE1 DNA Mariner 1 80 0 1255 169 56 63 chr2 23102995 23103027 -227584827 + MLT1A1 LTR MaLR 95 126 -239 2148 98 3 17 chr2 23103027 23103350 -227584504 - AluSg SINE Alu 0 310 1 1255 169 56 63 chr2 23103350 23103588 -227584266 + MLT1A1 LTR MaLR 126 365 0 246 137 78 0 chr2 23103590 23103641 -227584213 + MER110 LTR ERV1 415 469 -22 235 233 19 19 chr2 23105299 23105402 -227582452 + (CCG)n Simple_repeat Simple_repeat 2 104 0 * 236 231 25 41 chr2 23105354 23105475 -227582379 + (CCCCAG)n Simple_repeat Simple_repeat 6 124 0 189 0 0 0 chr2 23105521 23105542 -227582312 + (CCG)n Simple_repeat Simple_repeat 2 22 0 275 225 14 0 chr2 23105635 23105706 -227582148 + GA-rich Low_complexity Low_complexity 1 72 0 217 206 64 50 chr2 23105819 23105960 -227581894 + (CCGGG)n Simple_repeat Simple_repeat 2 144 0 21 0 0 0 chr2 23106194 23106215 -227581639 + GC_rich Low_complexity Low_complexity 1 21 0 207 156 0 0 chr2 23107106 23107138 -227580716 + (CCG)n Simple_repeat Simple_repeat 3 34 0 22 0 0 0 chr2 23107172 23107194 -227580660 + GC_rich Low_complexity Low_complexity 1 22 0 1035 184 24 107 chr2 23107707 23108044 -227579810 + MLT1A1 LTR MaLR 56 364 -1 1819 178 28 6 chr2 23108044 23108404 -227579450 + L1MA7 LINE L1 5923 6290 -1 2376 63 3 0 chr2 23108819 23109103 -227578751 - AluY SINE Alu -14 297 13 478 120 0 13 chr2 23109968 23110043 -227577811 + MER46A DNA MER2_type 97 170 -66 1224 150 5 5 chr2 23110956 23111149 -227576705 - LTR40a LTR ERVL -3 516 324 628 318 17 0 chr2 23111805 23111984 -227575870 - MIR SINE MIR -75 187 6 265 263 88 26 chr2 23111975 23112089 -227575765 + L3 LINE CR1 1298 1418 -159 * 369 0 0 0 chr2 23113514 23113555 -227574299 + (TG)n Simple_repeat Simple_repeat 2 42 0 490 214 183 0 chr2 23113881 23114012 -227573842 - MER5A DNA MER1_type -4 185 31 182 237 85 17 chr2 23114969 23115028 -227572826 - L2 LINE L2 -4 3309 3247 302 246 119 0 chr2 23115385 23115503 -227572351 + MIR SINE MIR 117 248 -14 2087 122 18 33 chr2 23115512 23115847 -227572007 + L1M2 LINE L1 5469 5798 -493 273 119 0 0 chr2 23117233 23117275 -227570579 + (T)n Simple_repeat Simple_repeat 1 42 0 570 153 71 0 chr2 23117867 23117965 -227569889 + AluJb SINE Alu 190 294 -18 273 233 0 0 chr2 23118769 23118859 -227568995 + (TA)n Simple_repeat Simple_repeat 2 91 0 2499 174 54 14 chr2 23118894 23118916 -227568938 - L1MB2 LINE L1 -28 6143 6123 2308 89 0 7 chr2 23118916 23119209 -227568645 - AluSx SINE Alu -11 301 11 2499 174 54 14 chr2 23119209 23119686 -227568168 - L1MB2 LINE L1 -48 6123 5624 2055 111 3 39 chr2 23119697 23120004 -227567850 - AluSp SINE Alu -17 296 1 455 283 90 6 chr2 23120208 23120374 -227567480 + MIR SINE MIR 9 188 -74 493 247 84 26 chr2 23120803 23120993 -227566861 - MIR SINE MIR -41 221 21 684 289 16 43 chr2 23122670 23122974 -227564880 + HAL1b LINE L1 352 647 -701 1659 200 114 47 chr2 23123027 23123476 -227564378 + MLT2B1 LTR ERVL 1 479 -41 1021 168 12 0 chr2 23123514 23123681 -227564173 + MER6B DNA MER2_type 1 169 -41 21 0 0 0 chr2 23123747 23123768 -227564086 + AT_rich Low_complexity Low_complexity 1 21 0 1269 233 128 49 chr2 23123903 23126115 -227561739 - L1ME2 LINE L1 -1 6163 3665 1370 242 132 19 chr2 23126121 23126766 -227561088 - L1ME2 LINE L1 -2954 3192 2475 2960 235 63 24 chr2 23126796 23127331 -227560523 - L1ME1 LINE L1 -5 6230 5718 2169 35 0 8 chr2 23127331 23127587 -227560267 - AluY SINE Alu -57 254 1 2960 235 63 24 chr2 23127587 23128683 -227559171 - L1ME1 LINE L1 -517 5718 4524 296 312 11 0 chr2 23128689 23128782 -227559072 - L1ME1 LINE L1 -2054 4161 4068 * 3122 228 44 48 chr2 23128779 23128906 -227558948 - L1ME1 LINE L1 -2953 3262 3136 808 284 62 0 chr2 23128906 23129117 -227558737 - MER58A DNA MER1_type 0 224 1 3122 228 44 48 chr2 23129117 23130631 -227557223 - L1ME1 LINE L1 -3079 3136 1450 376 331 89 28 chr2 23130851 23131225 -227556629 - L1MEc LINE L1 -4406 1675 882 229 226 157 10 chr2 23131242 23131344 -227556510 - L1M3de LINE L1 -4700 1953 1837 306 0 0 0 chr2 23131346 23131380 -227556474 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 489 308 67 73 chr2 23131380 23131506 -227556348 - L1MEc LINE L1 -5169 940 815 1529 186 0 20 chr2 23131506 23131802 -227556052 - AluJo SINE Alu -22 290 1 489 308 67 73 chr2 23131802 23132272 -227555582 - L1MEc LINE L1 -5294 815 461 482 313 28 53 chr2 23132467 23132863 -227554991 - L1MEc LINE L1 -5683 387 2 207 338 0 0 chr2 23133221 23133295 -227554559 + MIR3 SINE MIR 81 154 -54 979 265 105 47 chr2 23133844 23134312 -227553542 + LTR33A LTR ERVL 23 517 -6 542 237 44 44 chr2 23134422 23134557 -227553297 - L2 LINE L2 0 3272 3138 391 272 8 32 chr2 23134608 23134733 -227553121 + MIR SINE MIR 26 147 -115 251 283 57 47 chr2 23135103 23135209 -227552645 + L2 LINE L2 2994 3100 -172 405 70 0 0 chr2 23135223 23135280 -227552574 + (CAT)n Simple_repeat Simple_repeat 1 57 0 330 45 0 0 chr2 23135440 23135484 -227552370 + (TG)n Simple_repeat Simple_repeat 2 45 0 414 325 78 6 chr2 23136055 23136221 -227551633 - MIR3 SINE MIR -1 207 30 1978 112 31 17 chr2 23137335 23137629 -227550225 + AluSx SINE Alu 1 298 -14 594 204 35 114 chr2 23139139 23139428 -227548426 - L1MEc LINE L1 -5135 1261 996 500 323 26 5 chr2 23139443 23139638 -227548216 - MER58C DNA MER1_type 0 215 17 2243 233 79 79 chr2 23139656 23139742 -227548112 - L1MEc LINE L1 -5421 975 890 300 27 0 0 chr2 23139742 23139779 -227548075 + (ATTG)n Simple_repeat Simple_repeat 2 38 0 2243 233 79 79 chr2 23139779 23140646 -227547208 - L1MEc LINE L1 -5505 891 22 1549 109 0 0 chr2 23140827 23141038 -227546816 - AluSg/x SINE Alu -10 302 92 1025 273 93 14 chr2 23142236 23142591 -227545263 - LTR16B LTR ERVL -8 456 74 1317 176 9 45 chr2 23143102 23143369 -227544485 + MLT1A1 LTR MaLR 1 301 -64 2157 112 16 0 chr2 23143369 23143674 -227544180 - AluSx SINE Alu -2 310 1 1317 176 9 45 chr2 23143674 23143737 -227544117 + MLT1A1 LTR MaLR 301 365 0 237 381 0 0 chr2 23144397 23144481 -227543373 - L2 LINE L2 -1 3271 3188 243 203 0 0 chr2 23144582 23144646 -227543208 + A-rich Low_complexity Low_complexity 1 64 0 403 200 0 0 chr2 23144714 23144789 -227543065 - MER45C DNA AcHobo 0 953 879 366 279 19 0 chr2 23144825 23144929 -227542925 - LTR16B LTR ERVL -196 268 163 309 274 14 0 chr2 23144931 23145004 -227542850 - MER45C DNA AcHobo -190 763 690 263 219 62 0 chr2 23145106 23145170 -227542684 - MER45C DNA AcHobo -775 178 111 273 178 0 0 chr2 23145171 23145216 -227542638 + Alu SINE Alu 1 45 -255 695 326 102 49 chr2 23145246 23146043 -227541811 - L2 LINE L2 -211 3061 2211 1384 162 64 24 chr2 23146045 23146341 -227541513 + MLT1C LTR MaLR 1 308 -159 186 233 183 17 chr2 23147055 23147115 -227540739 - L2 LINE L2 -2 3270 3201 712 245 172 45 chr2 23147332 23147728 -227540126 + MLT1J2 LTR MaLR 5 450 0 2294 81 7 0 chr2 23148603 23148910 -227538944 + AluY SINE Alu 1 309 -2 2189 106 0 6 chr2 23149474 23149785 -227538069 + AluSg SINE Alu 1 309 -1 504 288 23 23 chr2 23150211 23150388 -227537466 + MLT1L LTR MaLR 112 288 -327 344 258 97 32 chr2 23150470 23150625 -227537229 + MLT1L LTR MaLR 445 609 -6 1996 118 14 0 chr2 23151122 23151409 -227536445 + AluSx SINE Alu 1 291 -21 878 290 9 0 chr2 23151420 23151641 -227536213 - MIR SINE MIR 0 262 40 2398 55 0 0 chr2 23151905 23152196 -227535658 + L1P LINE L1 4515 4805 -1341 241 196 0 20 chr2 23152196 23152247 -227535607 + MLT1G1 LTR MaLR 546 595 0 459 0 0 0 chr2 23153522 23153573 -227534281 + (CA)n Simple_repeat Simple_repeat 2 52 0 201 314 69 39 chr2 23153602 23153704 -227534150 - L2 LINE L2 -10 3262 3158 240 163 0 0 chr2 23153935 23153978 -227533876 + GA-rich Low_complexity Low_complexity 2 44 0 2601 36 0 0 chr2 23155509 23155815 -227532039 - AluY SINE Alu -5 306 1 1571 188 3 20 chr2 23155924 23156222 -227531632 - AluJo SINE Alu -18 294 2 507 233 157 56 chr2 23157082 23157439 -227530415 + L2 LINE L2 2921 3313 0 381 329 67 50 chr2 23157521 23157804 -227530050 + L1ME4a LINE L1 5725 6012 -109 301 127 67 149 chr2 23157826 23157931 -227529923 + L1ME4a LINE L1 5999 6092 -29 2456 32 0 32 chr2 23157931 23158243 -227529611 - AluY SINE Alu -9 302 1 301 127 67 149 chr2 23158243 23158271 -227529583 + L1ME4a LINE L1 6092 6121 0 368 279 23 0 chr2 23158975 23159061 -227528793 + MIR3 SINE MIR 87 174 -34 239 342 33 8 chr2 23159116 23159236 -227528618 - L2 LINE L2 -158 3114 2992 672 277 21 16 chr2 23159555 23159743 -227528111 + MER5A DNA MER1_type 1 189 0 534 260 152 7 chr2 23159746 23159939 -227527915 + MIR SINE MIR 10 223 -39 25 31 0 0 chr2 23159942 23159974 -227527880 + AT_rich Low_complexity Low_complexity 1 32 0 2255 106 0 3 chr2 23160071 23160383 -227527471 - AluSx SINE Alu -1 311 1 252 378 0 27 chr2 23160785 23160896 -227526958 - MIR3 SINE MIR -52 156 49 297 358 74 35 chr2 23163127 23163384 -227524470 + L3 LINE CR1 1064 1330 -247 277 213 50 25 chr2 23165864 23165944 -227521910 + MIR SINE MIR 178 259 -3 284 272 141 0 chr2 23166303 23166395 -227521459 + MER5C DNA MER1_type 3 107 -217 2241 107 0 0 chr2 23166404 23166714 -227521140 + AluSg SINE Alu 1 310 0 244 206 0 48 chr2 23166874 23166937 -227520917 + MER5C DNA MER1_type 251 310 -14 4560 155 31 11 chr2 23168698 23169500 -227518354 + L1MB3 LINE L1 5284 6101 -82 606 140 0 0 chr2 23170259 23170359 -227517495 + L1MB3 LINE L1 6083 6182 -1 22 0 0 0 chr2 23170501 23170523 -227517331 + AT_rich Low_complexity Low_complexity 1 22 0 940 271 88 6 chr2 23170545 23170910 -227516944 - L1ME2 LINE L1 -26 6138 5744 1215 195 24 42 chr2 23171486 23171773 -227516081 + AluJo SINE Alu 1 282 -30 315 193 29 14 chr2 23173784 23173924 -227513930 + (TA)n Simple_repeat Simple_repeat 1 142 0 228 173 77 19 chr2 23173994 23174046 -227513808 + L1ME4a LINE L1 5960 6014 -107 351 0 0 0 chr2 23174664 23174703 -227513151 + (TG)n Simple_repeat Simple_repeat 1 39 0 306 253 32 50 chr2 23175880 23176073 -227511781 - L2 LINE L2 -1 3312 3091 268 260 0 14 chr2 23176762 23176835 -227511019 - L2 LINE L2 -208 3064 2993 2242 104 3 0 chr2 23176984 23177291 -227510563 + AluSx SINE Alu 1 308 -4 258 307 47 40 chr2 23177600 23177750 -227510104 + MIR SINE MIR 66 216 -46 310 190 300 20 chr2 23177790 23177890 -227509964 - L1ME4a LINE L1 -5 6116 5989 260 222 61 20 chr2 23177897 23177996 -227509858 - L1ME4a LINE L1 -179 5942 5840 1576 226 27 27 chr2 23178105 23178472 -227509382 - LTR40a LTR ERVL -152 367 1 818 255 61 9 chr2 23179500 23179712 -227508142 - MIR SINE MIR -6 256 34 22 0 0 0 chr2 23180004 23180026 -227507828 + AT_rich Low_complexity Low_complexity 1 22 0 2016 100 21 7 chr2 23180028 23180319 -227507535 + AluSx SINE Alu 13 307 -5 210 154 0 0 chr2 23181617 23181656 -227506198 + A-rich Low_complexity Low_complexity 1 39 0 449 196 74 16 chr2 23182630 23182760 -227505094 - MLT1I LTR MaLR -3 536 286 182 305 17 17 chr2 23183182 23183241 -227504613 - L3 LINE CR1 -8 1569 1511 389 327 111 0 chr2 23183305 23183522 -227504332 - L3 LINE CR1 -273 1304 1064 798 312 94 18 chr2 23183612 23184058 -227503796 - L2 LINE L2 0 3313 2834 220 329 13 0 chr2 23184221 23184297 -227503557 - L3 LINE CR1 -737 840 764 1745 184 27 3 chr2 23185649 23185980 -227501874 - MER44D DNA MER2_type 0 609 1 1400 192 22 11 chr2 23186017 23186288 -227501566 + AluJb SINE Alu 20 293 -19 236 214 294 46 chr2 23186983 23187139 -227500715 - MIR SINE MIR -33 175 18 204 179 0 0 chr2 23189510 23189549 -227498305 + GA-rich Low_complexity Low_complexity 4 42 0 1860 151 46 27 chr2 23189667 23189732 -227498122 - L1MB8 LINE L1 -2 6176 6114 2136 109 3 0 chr2 23189732 23190035 -227497819 + AluSp SINE Alu 1 304 -9 1860 151 46 27 chr2 23190035 23190340 -227497514 - L1MB8 LINE L1 -64 6114 5799 594 112 0 0 chr2 23190356 23190445 -227497409 - AluSc SINE Alu -6 303 215 433 142 36 24 chr2 23190447 23190567 -227497287 - L1MB8 LINE L1 -399 5779 5659 1239 84 0 24 chr2 23190659 23190826 -227497028 - AluSc SINE Alu -77 232 70 1011 356 87 25 chr2 23190826 23191834 -227496020 - L2 LINE L2 -65 3248 2174 318 308 61 57 chr2 23192092 23192371 -227495483 - L2 LINE L2 -179 3134 2855 285 159 0 0 chr2 23192588 23192632 -227495222 + Alu SINE Alu 246 289 -13 23 33 0 0 chr2 23192802 23192832 -227495022 + AT_rich Low_complexity Low_complexity 1 30 0 2245 109 0 3 chr2 23192910 23193221 -227494633 + AluSg SINE Alu 1 310 0 189 121 0 0 chr2 23193255 23193288 -227494566 + (CAT)n Simple_repeat Simple_repeat 3 35 0 399 339 27 43 chr2 23194743 23195000 -227492854 + L1M4 LINE L1 3169 3421 -2725 2279 43 40 7 chr2 23195000 23195300 -227492554 + AluY SINE Alu 1 310 -1 821 160 0 0 chr2 23195352 23195483 -227492371 - FLAM_C SINE Alu -10 133 3 1202 268 136 14 chr2 23195509 23196010 -227491844 + L1ME3A LINE L1 5587 6148 -22 1820 131 7 0 chr2 23196043 23196369 -227491485 + AluSx SINE Alu 1 328 0 559 200 59 0 chr2 23197377 23197512 -227490342 + L1MB7 LINE L1 6042 6184 0 194 298 107 46 chr2 23197912 23198043 -227489811 + L2 LINE L2 3104 3242 -30 186 283 22 0 chr2 23198058 23198104 -227489750 + L2 LINE L2 3214 3260 -12 180 77 0 0 chr2 23198488 23198514 -227489340 + (CAGCC)n Simple_repeat Simple_repeat 3 28 0 468 289 100 28 chr2 23199165 23199345 -227488509 + MIR SINE MIR 1 193 -69 2105 194 94 26 chr2 23199366 23199834 -227488020 + MLT1D LTR MaLR 1 500 -5 1022 329 141 55 chr2 23199990 23201338 -227486516 - L3 LINE CR1 -112 1465 2 193 250 0 88 chr2 23201514 23201582 -227486272 + MER5A DNA MER1_type 30 91 -98 920 263 93 35 chr2 23201597 23201973 -227485881 - MLT1J1 LTR MaLR -2 444 47 270 183 141 0 chr2 23201989 23202060 -227485794 - MLT1J1 LTR MaLR -352 94 14 235 316 127 0 chr2 23202070 23202149 -227485705 - MER5A DNA MER1_type -100 89 1 416 303 83 78 chr2 23202227 23202613 -227485241 + L2 LINE L2 2864 3251 -21 487 223 39 0 chr2 23203081 23203184 -227484670 + MLT1F1 LTR MaLR 1 107 -435 1297 221 52 22 chr2 23203203 23203544 -227484310 + MLT1F1 LTR MaLR 224 567 0 33 80 0 0 chr2 23203756 23203831 -227484023 + AT_rich Low_complexity Low_complexity 1 75 0 1757 144 34 0 chr2 23204103 23204395 -227483459 + AluSx SINE Alu 2 303 -9 201 39 0 0 chr2 23205780 23205806 -227482048 + (G)n Simple_repeat Simple_repeat 1 26 0 1891 125 7 17 chr2 23206302 23206598 -227481256 + AluSx SINE Alu 1 293 -19 227 186 17 34 chr2 23207580 23207639 -227480215 + L2 LINE L2 3212 3269 -3 187 286 0 0 chr2 23207739 23207788 -227480066 + L2 LINE L2 3263 3311 -2 520 249 157 40 chr2 23208208 23208423 -227479431 + MIR SINE MIR 10 251 -11 22 0 0 0 chr2 23210161 23210183 -227477671 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr2 23211230 23211285 -227476569 + GC_rich Low_complexity Low_complexity 1 55 0 321 131 0 0 chr2 23212690 23212751 -227475103 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 335 298 161 19 chr2 23213621 23213782 -227474072 - MIR3 SINE MIR -6 202 19 188 327 44 26 chr2 23214600 23214713 -227473141 + L2 LINE L2 3142 3256 -16 201 94 0 0 chr2 23216266 23216298 -227471556 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 269 208 15 154 chr2 23217516 23217646 -227470208 + MER103 DNA DNA 3 114 -52 282 339 123 0 chr2 23217917 23218047 -227469807 + L2 LINE L2 3127 3272 0 1855 251 101 15 chr2 23218903 23219517 -227468337 + HsTC2a DNA Tc2 78 744 0 437 322 33 115 chr2 23223258 23223683 -227464171 + L2 LINE L2 2881 3270 -2 242 253 23 58 chr2 23223811 23223898 -227463956 + L2 LINE L2 3004 3087 -185 201 335 90 48 chr2 23224444 23224611 -227463243 + L2 LINE L2 3083 3256 -16 204 158 0 0 chr2 23224649 23224687 -227463167 + A-rich Low_complexity Low_complexity 3 40 0 2260 140 60 3 chr2 23225895 23226259 -227461595 - MLT1B LTR MaLR 0 390 6 225 303 99 46 chr2 23226621 23226773 -227461081 + MIR SINE MIR 95 254 -8 417 330 115 10 chr2 23227310 23227519 -227460335 - MIR SINE MIR -1 261 31 872 258 99 40 chr2 23227608 23227910 -227459944 + L1ME3 LINE L1 5795 6114 -48 205 379 66 71 chr2 23229850 23230288 -227457566 - L2 LINE L2 0 3272 2837 408 167 18 53 chr2 23230796 23230910 -227456944 + Charlie7 DNA MER1_type 28 137 -2475 463 266 158 59 chr2 23231033 23231337 -227456517 + L1MDa LINE L1 1736 2069 -4471 399 259 28 52 chr2 23231777 23231989 -227455865 + L1MDa LINE L1 2850 3056 -3484 2178 115 86 9 chr2 23232101 23232439 -227455415 - THE1B LTR MaLR 0 364 1 218 325 113 25 chr2 23232842 23232922 -227454932 + L2 LINE L2 3169 3255 -17 2081 175 16 10 chr2 23234410 23234798 -227453056 + MLT1B LTR MaLR 1 390 0 207 256 141 0 chr2 23235544 23235622 -227452232 - MIR SINE MIR -5 257 169 784 271 48 31 chr2 23235631 23235830 -227452024 + L1ME3A LINE L1 5418 5625 -545 2707 80 16 16 chr2 23235830 23236205 -227451649 - THE1C LTR MaLR 0 375 1 784 271 48 31 chr2 23236205 23236297 -227451557 + L1ME3A LINE L1 5625 5714 -456 1153 228 39 50 chr2 23236319 23236683 -227451171 + L1ME3A LINE L1 5811 6170 0 250 329 200 0 chr2 23236687 23236827 -227451027 - MIR SINE MIR -89 173 6 197 309 181 0 chr2 23237561 23237655 -227450199 + MIR SINE MIR 152 262 0 417 257 136 58 chr2 23239169 23239515 -227448339 - HAL1 LINE L1 -2 2505 2133 376 275 45 79 chr2 23239783 23239961 -227447893 - HAL1 LINE L1 -2317 190 19 643 281 43 5 chr2 23240294 23240579 -227447275 + HERVL LTR ERVL 1711 1854 -3142 385 351 19 40 chr2 23240611 23240770 -227447084 + HERVL LTR ERVL 3213 3374 -2280 2287 93 3 0 chr2 23240770 23241060 -227446794 + AluSc SINE Alu 1 291 -18 385 351 19 40 chr2 23241060 23241321 -227446533 + HERVL LTR ERVL 3374 3624 -2030 514 306 179 21 chr2 23242246 23242631 -227445223 + MLT1J2 LTR MaLR 5 450 0 494 338 86 13 chr2 23244759 23244993 -227442861 + MLT1J2 LTR MaLR 200 450 0 1221 223 81 17 chr2 23245824 23246170 -227441684 + MER110A LTR ERV1 69 436 -32 266 178 0 0 chr2 23246169 23246214 -227441640 + MLT1A2 LTR MaLR 5 49 -325 * 231 354 65 14 chr2 23247448 23247739 -227440115 - L2 LINE L2 -1020 2294 1989 186 278 74 0 chr2 23249889 23249943 -227437911 + L2 LINE L2 3209 3266 -6 233 353 30 0 chr2 23250001 23250134 -227437720 + L2 LINE L2 2637 2773 -541 713 262 21 5 chr2 23250554 23250745 -227437109 + MIR SINE MIR 29 222 -40 692 204 0 30 chr2 23250784 23250916 -227436938 + AluJb SINE Alu 165 292 -20 234 0 0 0 chr2 23250925 23250951 -227436903 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 402 115 0 0 chr2 23250970 23251031 -227436823 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 858 83 0 0 chr2 23251133 23251253 -227436601 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 246 357 51 0 chr2 23251259 23251357 -227436497 - MIR SINE MIR -71 137 35 2228 134 0 3 chr2 23252677 23252990 -227434864 + AluSx SINE Alu 1 312 0 286 218 0 103 chr2 23256942 23257029 -227430825 + L2 LINE L2 3193 3270 -2 437 239 92 37 chr2 23257082 23257245 -227430609 - MLT1J2 LTR MaLR 0 450 279 198 0 0 0 chr2 23258012 23258034 -227429820 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 225 279 29 0 chr2 23258674 23258742 -227429112 - L1ME LINE L1 -437 5684 5615 567 307 127 27 chr2 23258745 23259361 -227428493 - L1ME LINE L1 -639 5539 4853 715 99 54 9 chr2 23259375 23259508 -227428346 - AluSp/q SINE Alu 0 313 174 657 289 59 122 chr2 23259538 23260127 -227427727 - L1ME LINE L1 -1316 4830 4279 573 329 133 40 chr2 23261113 23262074 -227425780 - L2 LINE L2 0 3272 2215 304 202 83 60 chr2 23262520 23262604 -227425250 - L2 LINE L2 -2 3270 3185 414 0 0 0 chr2 23262850 23262896 -227424958 + (TG)n Simple_repeat Simple_repeat 1 46 0 504 266 90 17 chr2 23265527 23265704 -227422150 + L3b LINE CR1 1152 1341 -242 793 228 35 5 chr2 23266334 23266536 -227421318 - LTR67 LTR ERVL -2 555 348 258 315 14 0 chr2 23267010 23267083 -227420771 + MIR SINE MIR 20 93 -169 1079 186 0 16 chr2 23267170 23267358 -227420496 - AluJb SINE Alu -13 299 115 183 244 0 24 chr2 23267869 23267910 -227419944 + MIR SINE MIR 112 151 -111 * 268 187 40 80 chr2 23267896 23267971 -227419883 - MIR SINE MIR -95 113 42 305 321 108 35 chr2 23268307 23268740 -227419114 + L2 LINE L2 2227 2691 -623 390 379 11 6 chr2 23268965 23269139 -227418715 - MIR SINE MIR -75 187 13 578 247 100 24 chr2 23269412 23269582 -227418272 + L2 LINE L2 3090 3272 0 389 293 110 30 chr2 23270175 23270339 -227417515 + MIR SINE MIR 79 255 -7 191 300 25 12 chr2 23271360 23271440 -227416414 + MIR SINE MIR 59 139 -69 393 281 22 43 chr2 23272445 23272584 -227415270 - MIR SINE MIR -35 227 92 591 173 11 6 chr2 23272995 23273174 -227414680 + (TG)n Simple_repeat Simple_repeat 1 180 0 332 215 9 0 chr2 23273187 23273294 -227414560 + (TG)n Simple_repeat Simple_repeat 2 109 0 250 229 5 5 chr2 23273320 23273547 -227414307 + (TG)n Simple_repeat Simple_repeat 1 227 0 447 196 11 6 chr2 23273561 23273740 -227414114 + (TG)n Simple_repeat Simple_repeat 1 180 0 388 195 29 0 chr2 23273805 23273979 -227413875 + (TG)n Simple_repeat Simple_repeat 2 180 0 422 193 23 0 chr2 23273991 23274162 -227413692 + (TG)n Simple_repeat Simple_repeat 2 176 0 299 132 15 0 chr2 23274207 23274275 -227413579 + (TG)n Simple_repeat Simple_repeat 1 69 0 17407 28 1 1 chr2 23275873 23278045 -227409809 - L1P LINE L1 -1658 4488 2315 7671 30 0 0 chr2 23278045 23279404 -227408450 + L1PA3 LINE L1 4811 6169 0 1150 225 103 48 chr2 23279422 23279821 -227408033 - MLT1G1 LTR MaLR -37 558 95 2516 185 18 35 chr2 23279821 23279993 -227407861 + MLT1D LTR MaLR 1 174 -331 1623 168 34 30 chr2 23279993 23280290 -227407564 - AluJb SINE Alu -14 298 1 2516 185 18 35 chr2 23280290 23280631 -227407223 + MLT1D LTR MaLR 174 505 0 1150 225 103 48 chr2 23280631 23280707 -227407147 - MLT1G1 LTR MaLR -500 95 25 1404 275 124 46 chr2 23280966 23282232 -227405622 - L1MC4 LINE L1 0 8042 6877 2141 100 24 7 chr2 23282232 23282522 -227405332 - AluSq SINE Alu -17 296 2 1404 275 124 46 chr2 23282522 23282862 -227404992 - L1MC4 LINE L1 -1165 6877 6565 1116 156 40 10 chr2 23282862 23283061 -227404793 - MER6B DNA MER2_type -1 209 5 1404 275 124 46 chr2 23283061 23283877 -227403977 - L1MC4 LINE L1 -1477 6565 5255 434 318 118 47 chr2 23283883 23284264 -227403590 - L1MC4 LINE L1 -944 5202 4795 884 221 99 1 chr2 23285575 23285857 -227401997 + MER46C DNA MER2_type 2 338 0 490 287 45 6 chr2 23286164 23286321 -227401533 - MIR SINE MIR 0 262 100 228 254 94 14 chr2 23286346 23286484 -227401370 - LTR67 LTR ERVL -29 528 380 204 309 75 21 chr2 23286908 23287002 -227400852 - MIR SINE MIR -87 121 23 638 269 138 24 chr2 23287239 23287529 -227400325 - MLT1H LTR MaLR -16 533 211 1331 156 3 122 chr2 23288626 23288998 -227398856 - L1MB8 LINE L1 -6 6172 5844 600 240 73 82 chr2 23289001 23289234 -227398620 + MIR SINE MIR 31 261 -1 1276 135 50 0 chr2 23289682 23289904 -227397950 - MSTB LTR MaLR 0 426 194 1384 220 3 33 chr2 23289907 23290211 -227397643 - AluJo SINE Alu -12 300 6 998 138 46 0 chr2 23290219 23290393 -227397461 - MSTB LTR MaLR -244 182 1 221 373 15 0 chr2 23290910 23290977 -227396877 + L2 LINE L2 3123 3190 -82 23 54 0 0 chr2 23291000 23291037 -227396817 + AT_rich Low_complexity Low_complexity 1 37 0 233 340 47 19 chr2 23292701 23292807 -227395047 - L2 LINE L2 -5 3308 3200 1073 80 0 0 chr2 23293500 23293637 -227394217 - AluSg/x SINE Alu -6 304 168 2004 151 84 35 chr2 23293690 23294061 -227393793 + MLT1B LTR MaLR 2 390 0 2609 68 0 0 chr2 23295623 23295932 -227391922 + AluY SINE Alu 1 309 -2 1262 291 148 55 chr2 23296111 23296178 -227391676 - L2 LINE L2 -2 3311 3252 889 195 133 0 chr2 23296178 23296373 -227391481 - MER58A DNA MER1_type -3 221 1 1262 291 148 55 chr2 23296373 23297504 -227390350 - L2 LINE L2 -61 3252 1990 662 239 116 61 chr2 23297648 23297941 -227389913 - L2 LINE L2 -1324 1990 1682 336 336 35 17 chr2 23298084 23298200 -227389654 - L2 LINE L2 -1 3271 3154 807 149 29 120 chr2 23298211 23298419 -227389435 + MER20 DNA MER1_type 1 189 -30 234 337 102 10 chr2 23298859 23298957 -227388897 - L2 LINE L2 -528 2786 2680 768 306 37 0 chr2 23298969 23299185 -227388669 - MIR SINE MIR 0 262 39 488 71 12 60 chr2 23299833 23299917 -227387937 + MADE1 DNA Mariner 1 80 0 352 161 12 49 chr2 23300426 23300507 -227387347 + MIR3 SINE MIR 111 188 -20 1008 129 0 0 chr2 23300746 23300886 -227386968 + FLAM_C SINE Alu 3 142 -1 695 252 110 13 chr2 23302186 23302504 -227385350 + LTR16C LTR ERVL 120 468 -23 871 279 68 6 chr2 23303292 23303614 -227384240 + LTR16C LTR ERVL 150 491 0 345 280 40 16 chr2 23304832 23304957 -227382897 + MIR3 SINE MIR 10 137 -71 409 319 49 58 chr2 23305945 23306171 -227381683 - MIR SINE MIR -30 232 9 194 148 0 0 chr2 23307628 23307655 -227380199 - L2 LINE L2 -20 3252 3226 463 313 20 22 chr2 23308247 23308445 -227379409 + MIR SINE MIR 3 198 -62 2061 97 0 4 chr2 23310267 23310550 -227377304 + AluSc SINE Alu 23 304 0 578 138 0 0 chr2 23310551 23310660 -227377194 - L1PA12 LINE L1 -4449 3135 3019 328 320 39 10 chr2 23310662 23310765 -227377089 - MIR SINE MIR -141 121 16 755 244 107 90 chr2 23310776 23311288 -227376566 - LTR33 LTR ERVL 0 521 1 1184 231 126 38 chr2 23311651 23312153 -227375701 + L2 LINE L2 2780 3301 -12 189 0 0 0 chr2 23312154 23312175 -227375679 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 27 29 0 0 chr2 23312884 23312918 -227374936 + AT_rich Low_complexity Low_complexity 1 34 0 201 74 0 0 chr2 23313375 23313402 -227374452 + (A)n Simple_repeat Simple_repeat 1 27 0 1552 163 20 0 chr2 23313810 23314062 -227373792 - AluSx SINE Alu -51 261 5 473 327 125 9 chr2 23314222 23314647 -227373207 - L1ME4a LINE L1 -11 6110 5637 191 324 39 56 chr2 23317467 23317646 -227370208 + L2 LINE L2 2232 2407 -907 339 208 160 24 chr2 23317847 23317972 -227369882 + MIR3 SINE MIR 4 145 -63 186 246 154 108 chr2 23318040 23318098 -227369756 + MER5B DNA MER1_type 1 55 -123 2208 113 0 10 chr2 23318098 23318400 -227369454 + AluSx SINE Alu 3 301 -11 186 246 154 108 chr2 23318400 23318471 -227369383 + MER5B DNA MER1_type 55 136 -42 691 219 16 44 chr2 23318935 23319118 -227368736 + MER5B DNA MER1_type 1 178 0 2019 125 45 3 chr2 23319525 23319813 -227368041 + AluSx SINE Alu 1 300 -12 212 229 0 0 chr2 23320376 23320411 -227367443 + MER91 DNA MER1_type 130 164 -26 426 39 0 0 chr2 23320714 23320766 -227367088 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 237 267 89 11 chr2 23320789 23320879 -227366975 - L2 LINE L2 -47 3225 3129 390 280 72 16 chr2 23320969 23321094 -227366760 - L2 LINE L2 0 3313 3182 479 276 14 60 chr2 23321580 23321729 -227366125 - MIR SINE MIR -60 148 32 284 237 175 26 chr2 23323122 23323236 -227364618 + L2 LINE L2 3142 3272 0 890 237 63 5 chr2 23323589 23323796 -227364058 + MIR SINE MIR 13 231 -31 322 305 0 30 chr2 23324255 23324386 -227363468 + MIR3 SINE MIR 60 186 -22 568 332 50 9 chr2 23324785 23325005 -227362849 - MIR SINE MIR -19 243 15 201 175 25 0 chr2 23326685 23326725 -227361129 - MER5B DNA MER1_type 0 178 138 669 228 102 0 chr2 23327219 23327386 -227360468 - L3b LINE CR1 -117 1466 1283 1428 108 0 0 chr2 23328848 23329042 -227358812 - L1PA8 LINE L1 -4 6168 5975 190 264 204 34 chr2 23329678 23329947 -227357907 + L2 LINE L2 2353 2667 -647 384 275 44 93 chr2 23330788 23330970 -227356884 + MIR3 SINE MIR 18 190 -18 456 175 0 0 chr2 23331524 23331621 -227356233 + (TG)n Simple_repeat Simple_repeat 1 97 0 583 237 0 30 chr2 23332943 23333078 -227354776 - FLAM_C SINE Alu -1 132 2 766 201 35 0 chr2 23335872 23336046 -227351808 - L1MA9 LINE L1 -47 6265 6086 643 204 162 0 chr2 23336541 23336708 -227351146 + MER3 DNA MER1_type 15 208 -1 248 222 19 0 chr2 23336667 23336721 -227351133 - MER3 DNA MER1_type -119 90 36 * 242 302 104 0 chr2 23337914 23338010 -227349844 - L2 LINE L2 -15 3298 3193 695 250 17 56 chr2 23339631 23339863 -227347991 - L1ME2 LINE L1 -16 6148 5926 463 253 55 7 chr2 23341133 23341279 -227346575 + MIR3 SINE MIR 56 208 0 29 28 0 0 chr2 23342097 23342133 -227345721 + AT_rich Low_complexity Low_complexity 1 36 0 459 254 56 7 chr2 23345635 23345777 -227342077 + MIR3 SINE MIR 60 208 0 880 229 147 7 chr2 23346055 23346496 -227341358 - MLT1G LTR MaLR 0 530 32 786 214 46 25 chr2 23346765 23346961 -227340893 + MIR SINE MIR 21 220 -42 838 154 0 14 chr2 23348872 23349015 -227338839 - MLT1B LTR MaLR 0 390 250 270 285 86 93 chr2 23349016 23349167 -227338687 + MER5A DNA MER1_type 27 176 -13 588 250 45 60 chr2 23349968 23350055 -227337799 + MIR SINE MIR 64 151 -111 2185 104 3 0 chr2 23350055 23350352 -227337502 + AluSp SINE Alu 1 298 -15 588 250 45 60 chr2 23350352 23350464 -227337390 + MIR SINE MIR 151 260 -2 249 323 38 8 chr2 23352811 23352944 -227334910 + L2 LINE L2 2369 2505 -809 197 277 46 0 chr2 23352917 23352982 -227334872 + L2 LINE L2 3205 3272 0 * 373 278 145 61 chr2 23353174 23353566 -227334288 + L2 LINE L2 2830 3254 -18 2189 86 0 10 chr2 23355154 23355455 -227332399 + AluSc SINE Alu 1 298 -11 297 257 48 38 chr2 23355830 23355935 -227331919 + MIR SINE MIR 92 197 -65 1758 120 16 72 chr2 23357462 23357830 -227330024 - MER4A LTR ERV1 0 664 259 444 165 87 9 chr2 23357843 23357958 -227329896 - MER4A LTR ERV1 -539 125 2 262 325 127 25 chr2 23359511 23359708 -227328146 - MIR SINE MIR -36 226 10 2133 114 3 7 chr2 23360043 23360341 -227327513 - AluSx SINE Alu -15 297 1 259 254 0 15 chr2 23361551 23361618 -227326236 - L2 LINE L2 -2 3311 3246 235 340 61 36 chr2 23361971 23362143 -227325711 - MIR SINE MIR -63 145 16 812 193 18 94 chr2 23364601 23364824 -227323030 - MER63A DNA MER1_type -4 206 1 213 286 39 0 chr2 23365607 23365684 -227322170 - MIR SINE MIR -61 147 68 1754 144 0 24 chr2 23367008 23367306 -227320548 - AluJo SINE Alu -21 291 1 236 284 70 0 chr2 23367963 23368057 -227319797 - MIR SINE MIR -61 147 53 218 314 0 97 chr2 23372148 23372272 -227315582 + MIR SINE MIR 150 261 -1 180 346 23 54 chr2 23372272 23372402 -227315452 + L2 LINE L2 2924 3049 -223 810 184 10 7 chr2 23372847 23373013 -227314841 + L1ME2 LINE L1 6012 6183 -1 2989 132 18 25 chr2 23373317 23373832 -227314022 + L1MB3 LINE L1 5673 6183 0 261 0 0 0 chr2 23374782 23374811 -227313043 + (CA)n Simple_repeat Simple_repeat 1 29 0 342 80 0 0 chr2 23374811 23374861 -227312993 + (TC)n Simple_repeat Simple_repeat 1 50 0 465 50 0 0 chr2 23375309 23375369 -227312485 + (CA)n Simple_repeat Simple_repeat 2 61 0 336 351 60 12 chr2 23375920 23376088 -227311766 - MIR3 SINE MIR -15 193 18 299 161 145 0 chr2 23376135 23376197 -227311657 - MER5A DNA MER1_type -115 74 4 1951 149 3 3 chr2 23377324 23377633 -227310221 - AluJb SINE Alu -3 309 1 926 183 76 15 chr2 23378140 23378337 -227309517 - MER3 DNA MER1_type 0 209 1 885 276 141 42 chr2 23378494 23378991 -227308863 - MLT1K LTR MaLR -10 578 33 321 172 0 0 chr2 23379129 23379193 -227308661 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 329 294 18 55 chr2 23380775 23380843 -227307011 + MIR SINE MIR 81 150 -112 408 237 168 67 chr2 23380843 23381248 -227306606 - MLT1J1 LTR MaLR 0 446 1 329 294 18 55 chr2 23381248 23381342 -227306512 + MIR SINE MIR 150 237 -25 215 309 62 0 chr2 23382123 23382204 -227305650 - L2 LINE L2 -5 3308 3223 781 235 11 16 chr2 23382215 23382398 -227305456 + MIR SINE MIR 12 193 -69 1062 256 97 4 chr2 23382413 23383020 -227304834 - L2 LINE L2 -97 3216 2546 327 326 39 8 chr2 23383133 23383262 -227304592 + MIR3 SINE MIR 15 147 -61 370 321 146 6 chr2 23385302 23385467 -227302387 + MIR SINE MIR 69 256 -6 242 229 0 0 chr2 23385471 23385519 -227302335 + (TAG)n Simple_repeat Simple_repeat 3 50 0 195 311 27 14 chr2 23385727 23385801 -227302053 - L2 LINE L2 -171 3101 3027 639 169 0 0 chr2 23386144 23386292 -227301562 + (CA)n Simple_repeat Simple_repeat 2 149 0 888 273 85 56 chr2 23386308 23386684 -227301170 + MLT1I LTR MaLR 20 409 0 31 0 0 0 chr2 23387352 23387383 -227300471 + AT_rich Low_complexity Low_complexity 1 31 0 182 313 45 45 chr2 23389554 23389621 -227298233 + MIR SINE MIR 35 101 -107 229 224 282 12 chr2 23389678 23389763 -227298091 + MER5A DNA MER1_type 55 162 -27 * 540 194 0 0 chr2 23389692 23389796 -227298058 - MER5A DNA MER1_type -80 109 6 382 304 0 48 chr2 23389936 23390104 -227297750 - L1MB1 LINE L1 -25 6164 6005 651 206 0 86 chr2 23390106 23390315 -227297539 + L1MA10 LINE L1 6144 6334 0 2301 98 3 0 chr2 23390644 23390951 -227296903 - AluSx SINE Alu -4 308 1 272 223 252 0 chr2 23391486 23391625 -227296229 - MER96 DNA MER1_type? -1 174 1 1927 133 3 47 chr2 23394248 23394565 -227293289 + AluSx SINE Alu 1 303 -9 310 256 0 0 chr2 23395739 23395817 -227292037 - MLT1I LTR MaLR -3 406 329 407 284 56 12 chr2 23395949 23396111 -227291743 - MLT1J2 LTR MaLR -281 169 1 2036 117 23 7 chr2 23396294 23396593 -227291261 - AluSx SINE Alu -6 306 3 324 298 48 0 chr2 23396747 23396851 -227291003 - L2 LINE L2 0 3313 3205 755 325 184 33 chr2 23397016 23397324 -227290530 - L2 LINE L2 -340 2974 2714 186 43 0 0 chr2 23397324 23397347 -227290507 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 755 325 184 33 chr2 23397347 23398092 -227289762 - L2 LINE L2 -600 2714 1762 2181 125 0 0 chr2 23398155 23398460 -227289394 - AluSc SINE Alu -4 305 1 205 333 80 33 chr2 23399454 23399604 -227288250 + MIR SINE MIR 56 212 -50 331 282 176 21 chr2 23399804 23399946 -227287908 + MIR SINE MIR 45 208 -54 401 324 16 70 chr2 23400831 23401016 -227286838 - MIR SINE MIR -57 205 31 246 231 0 0 chr2 23401359 23401424 -227286430 + (TG)n Simple_repeat Simple_repeat 2 66 0 816 234 49 35 chr2 23402784 23403010 -227284844 + MIR SINE MIR 7 235 -27 939 119 0 8 chr2 23403121 23403255 -227284599 - AluSq/x SINE Alu -180 133 1 363 316 65 0 chr2 23404185 23404340 -227283514 - MIR3 SINE MIR -23 185 21 712 288 83 21 chr2 23404505 23404745 -227283109 + MIR SINE MIR 2 256 -6 1092 271 81 27 chr2 23406158 23406674 -227281180 - MLT1H LTR MaLR 0 549 6 755 289 147 16 chr2 23409255 23409739 -227278115 + MLT1L LTR MaLR 1 547 -68 281 320 47 29 chr2 23410077 23410249 -227277605 + L2 LINE L2 2863 3037 -235 26 30 0 0 chr2 23410457 23410490 -227277364 + AT_rich Low_complexity Low_complexity 1 33 0 2365 48 41 0 chr2 23410588 23410879 -227276975 - AluY SINE Alu -8 303 1 486 257 125 0 chr2 23411185 23411337 -227276517 - MIR SINE MIR -12 250 80 372 314 51 29 chr2 23412174 23412349 -227275505 + MIR SINE MIR 13 191 -71 1138 196 31 9 chr2 23412390 23412619 -227275235 + L1MB4 LINE L1 5947 6180 0 380 298 139 6 chr2 23413373 23413531 -227274323 - MIR SINE MIR -4 258 80 2204 117 0 0 chr2 23413914 23414221 -227273633 + AluSx SINE Alu 1 307 -5 1996 106 7 3 chr2 23415065 23415347 -227272507 + AluSx SINE Alu 7 289 -23 2232 113 0 3 chr2 23415356 23415665 -227272189 + AluSq SINE Alu 1 308 -5 961 266 12 12 chr2 23416170 23416429 -227271425 + MIR SINE MIR 4 262 0 211 316 120 17 chr2 23416463 23416580 -227271274 + L2 LINE L2 3136 3264 -8 551 319 38 30 chr2 23416997 23417232 -227270622 - MIR SINE MIR -14 248 12 481 341 78 27 chr2 23417184 23417592 -227270262 + L2 LINE L2 2246 2674 -640 * 339 287 11 83 chr2 23417877 23417980 -227269874 + MIR SINE MIR 94 203 -59 2359 61 0 7 chr2 23417980 23418273 -227269581 + AluY SINE Alu 1 291 -20 339 287 11 83 chr2 23418273 23418285 -227269569 + MIR SINE MIR 203 214 -48 2143 113 0 0 chr2 23418285 23418576 -227269278 + AluY SINE Alu 1 291 -20 339 287 11 83 chr2 23418576 23418588 -227269266 + MIR SINE MIR 214 225 -37 2130 114 0 3 chr2 23418588 23418886 -227268968 + AluSc SINE Alu 1 297 -12 339 287 11 83 chr2 23418886 23418937 -227268917 + MIR SINE MIR 225 261 -1 2335 86 0 7 chr2 23419435 23419738 -227268116 + AluSq SINE Alu 1 301 -12 1326 240 95 39 chr2 23420698 23421139 -227266715 + MLT1C LTR MaLR 1 466 -1 2147 129 3 0 chr2 23422616 23422927 -227264927 - AluSx SINE Alu 0 312 1 933 194 0 17 chr2 23424062 23424242 -227263612 - L1MB5 LINE L1 -6 6168 5992 2263 77 30 3 chr2 23424254 23424552 -227263302 - AluSq SINE Alu -7 306 1 210 378 20 0 chr2 23424746 23424844 -227263010 + L2 LINE L2 3173 3272 0 271 252 30 99 chr2 23426489 23426620 -227261234 + MER5A DNA MER1_type 60 181 -8 280 122 0 0 chr2 23427764 23427805 -227260049 + MER91 DNA MER1_type 4 44 -96 353 317 63 7 chr2 23427951 23428093 -227259761 - MIR3 SINE MIR -53 155 6 468 296 125 58 chr2 23428733 23429148 -227258706 - L2 LINE L2 0 3313 2871 211 362 58 19 chr2 23429419 23429626 -227258228 + L2 LINE L2 2461 2675 -639 217 234 0 0 chr2 23429908 23429955 -227257899 + L2 LINE L2 3226 3272 0 259 276 0 69 chr2 23431878 23431965 -227255889 + MIR SINE MIR 111 191 -71 369 241 29 92 chr2 23433160 23433334 -227254520 - MIR SINE MIR -55 207 45 333 0 0 0 chr2 23435201 23435238 -227252616 + (TG)n Simple_repeat Simple_repeat 2 38 0 322 219 31 0 chr2 23435238 23435302 -227252552 + L1MC4 LINE L1 6640 6705 -1337 2334 102 0 3 chr2 23435303 23435616 -227252238 - AluSx SINE Alu 0 312 1 204 219 234 0 chr2 23435618 23435682 -227252172 + MIR3 SINE MIR 124 202 -6 390 264 155 13 chr2 23436036 23436191 -227251663 - MIR SINE MIR 0 262 86 212 289 48 29 chr2 23437123 23437227 -227250627 + MIR SINE MIR 89 194 -68 279 290 23 11 chr2 23437366 23437542 -227250312 + (TA)n Simple_repeat Simple_repeat 2 179 0 673 293 85 29 chr2 23438798 23439044 -227248810 - MIR SINE MIR 0 262 3 881 149 0 8 chr2 23440511 23440645 -227247209 - FLAM_C SINE Alu 0 133 1 1483 86 247 0 chr2 23442031 23442286 -227245568 - AluYb8 SINE Alu 0 318 1 1675 162 52 0 chr2 23442999 23443289 -227244565 - AluJb SINE Alu -7 305 1 2177 102 3 0 chr2 23443665 23443960 -227243894 - AluSx SINE Alu -16 296 1 273 57 0 0 chr2 23444031 23444066 -227243788 + (TG)n Simple_repeat Simple_repeat 1 35 0 461 84 14 0 chr2 23444066 23444137 -227243717 + (GA)n Simple_repeat Simple_repeat 2 73 0 1919 171 50 28 chr2 23444711 23445068 -227242786 - MLT1A1 LTR MaLR 0 365 1 2102 131 30 24 chr2 23445451 23445786 -227242068 + MER1B DNA MER1_type 1 337 0 263 327 92 0 chr2 23446250 23446403 -227241451 + L2 LINE L2 3095 3261 -11 201 121 0 0 chr2 23446744 23446777 -227241077 + (TAA)n Simple_repeat Simple_repeat 1 33 0 304 326 12 0 chr2 23446997 23447083 -227240771 - L2 LINE L2 0 3313 3227 601 289 59 15 chr2 23447571 23447775 -227240079 - MIR SINE MIR 0 262 50 664 242 21 21 chr2 23448754 23448940 -227238914 - L2 LINE L2 0 3313 3128 758 290 102 37 chr2 23449366 23450354 -227237500 + L1MEd LINE L1 552 1475 -4835 1889 125 11 0 chr2 23450354 23450658 -227237196 + AluSx SINE Alu 1 307 0 758 290 102 37 chr2 23450658 23451342 -227236512 + L1MEd LINE L1 1475 2398 -3912 2493 65 0 0 chr2 23451375 23451682 -227236172 + AluSg SINE Alu 1 307 -3 1788 119 20 38 chr2 23451735 23452277 -227235577 + MER4A LTR ERV1 1 664 0 349 308 54 21 chr2 23452285 23452525 -227235329 + L1MEd LINE L1 2447 2694 -3435 340 244 225 34 chr2 23452525 23452734 -227235120 - L2 LINE L2 -176 3137 2889 224 193 123 0 chr2 23453079 23453136 -227234718 - MIR SINE MIR -78 184 121 282 353 73 18 chr2 23454481 23454699 -227233155 - MIR SINE MIR 0 262 33 1952 201 86 42 chr2 23456157 23456655 -227231199 + MLT2B1 LTR ERVL 1 520 0 234 271 96 131 chr2 23457717 23458008 -227229846 - L2 LINE L2 -16 3256 2976 198 0 0 0 chr2 23459068 23459090 -227228764 + (CAG)n Simple_repeat Simple_repeat 1 22 0 294 131 28 56 chr2 23459357 23459464 -227228390 + GA-rich Low_complexity Low_complexity 3 106 0 408 258 75 0 chr2 23459967 23460119 -227227735 - MIR SINE MIR -63 145 23 215 210 118 67 chr2 23460138 23460257 -227227597 + L2 LINE L2 2948 3072 -200 633 299 85 0 chr2 23460669 23460880 -227226974 - MIR SINE MIR -21 241 13 211 188 62 0 chr2 23460901 23460949 -227226905 - L2 LINE L2 -96 3176 3126 399 351 36 36 chr2 23462694 23462945 -227224909 - MIR SINE MIR -2 260 10 1562 194 41 36 chr2 23463598 23463914 -227223940 + MLT1A2 LTR MaLR 4 324 -50 2017 107 13 131 chr2 23463914 23464296 -227223558 - MER1B DNA MER1_type 0 337 1 1562 194 41 36 chr2 23464296 23464344 -227223510 + MLT1A2 LTR MaLR 324 370 -4 1992 106 3 20 chr2 23465800 23466101 -227221753 - AluSg SINE Alu -14 296 1 919 172 0 0 chr2 23466397 23466548 -227221306 + FRAM SINE Alu 1 151 -25 211 340 92 25 chr2 23467747 23468062 -227219792 - L2 LINE L2 -1152 2162 1827 274 242 111 40 chr2 23468328 23468369 -227219485 + MIR SINE MIR 42 79 -129 1972 145 0 13 chr2 23468369 23468679 -227219175 - AluSx SINE Alu -6 306 1 274 242 111 40 chr2 23468679 23468736 -227219118 + MIR SINE MIR 79 147 -61 491 319 11 27 chr2 23469841 23470029 -227217825 + MER5A DNA MER1_type 1 185 -4 384 287 67 27 chr2 23470696 23470846 -227217008 - LTR67 LTR ERVL -296 261 106 511 259 38 13 chr2 23471396 23471554 -227216300 - MLT1H1 LTR MaLR -42 513 352 255 200 90 30 chr2 23471542 23471642 -227216212 - MLT1H1 LTR MaLR -308 241 136 * 324 0 0 0 chr2 23471648 23471684 -227216170 + (TG)n Simple_repeat Simple_repeat 2 37 0 207 0 0 0 chr2 23472748 23472771 -227215083 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 314 219 47 0 chr2 23472999 23473063 -227214791 - MER91A DNA MER1_type -3 193 127 248 262 68 29 chr2 23474474 23474577 -227213277 + L2 LINE L2 3169 3275 -38 653 238 127 23 chr2 23475945 23476252 -227211602 - L1ME4a LINE L1 0 6121 5783 349 349 271 18 chr2 23477552 23478543 -227209311 - L3 LINE CR1 -123 1454 213 403 259 94 102 chr2 23479432 23479593 -227208261 - MIR SINE MIR -8 254 94 2241 110 0 0 chr2 23479593 23479894 -227207960 + AluSx SINE Alu 1 301 -11 403 259 94 102 chr2 23479894 23479987 -227207867 - MIR SINE MIR -168 94 2 200 221 206 0 chr2 23480120 23480188 -227207666 + L2 LINE L2 3186 3267 -5 472 252 49 14 chr2 23484694 23484837 -227203017 + MIR SINE MIR 78 225 -37 393 313 165 3 chr2 23485244 23485596 -227202258 + L2 LINE L2 2344 2752 -562 224 353 34 34 chr2 23485738 23485857 -227201997 + L2 LINE L2 3147 3265 -7 463 301 27 0 chr2 23486113 23486259 -227201595 + MIR SINE MIR 113 262 0 793 285 61 0 chr2 23486693 23486939 -227200915 + MIR SINE MIR 2 262 0 188 306 51 20 chr2 23487893 23487991 -227199863 + L2 LINE L2 2725 2825 -489 223 330 232 0 chr2 23489418 23489530 -227198324 - L3 LINE CR1 -438 1139 1002 1786 153 38 38 chr2 23489556 23489929 -227197925 - MLT1B LTR MaLR -17 373 1 769 319 153 25 chr2 23490235 23490667 -227197187 - L3 LINE CR1 -184 1393 907 295 198 52 21 chr2 23491035 23491132 -227196722 - MIR3 SINE MIR -10 198 98 2218 104 0 13 chr2 23491775 23492082 -227195772 + AluSx SINE Alu 1 303 -9 225 330 184 19 chr2 23492600 23492806 -227195048 - MIR SINE MIR -19 243 4 192 179 0 0 chr2 23492972 23493011 -227194843 + (TGGA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 23494824 23494844 -227193010 + (A)n Simple_repeat Simple_repeat 1 20 0 303 272 16 24 chr2 23495937 23496054 -227191800 + C-rich Low_complexity Low_complexity 1 116 0 238 279 0 0 chr2 23496885 23496946 -227190908 + L2 LINE L2 3101 3161 -111 661 298 28 6 chr2 23496962 23497143 -227190711 - MER91B DNA MER1_type -5 185 1 665 277 43 30 chr2 23497147 23497378 -227190476 - MIR SINE MIR -13 249 16 203 329 24 12 chr2 23497770 23497852 -227190002 + L2 LINE L2 2685 2767 -547 2218 117 0 16 chr2 23498635 23498951 -227188903 + AluSq SINE Alu 1 311 -2 1831 179 0 3 chr2 23498951 23499258 -227188596 + AluJo SINE Alu 1 307 -5 287 219 323 0 chr2 23499802 23499898 -227187956 + L2 LINE L2 3187 3313 0 509 247 105 0 chr2 23500773 23500940 -227186914 + MIR SINE MIR 16 197 -61 2288 178 52 0 chr2 23503413 23503818 -227184036 - MSTB LTR MaLR 0 426 1 195 204 0 23 chr2 23504035 23504079 -227183775 - L2 LINE L2 -80 3233 3191 329 247 67 11 chr2 23505255 23505344 -227182510 + MER5B DNA MER1_type 85 178 0 258 307 99 0 chr2 23506161 23506262 -227181592 - L2 LINE L2 -2 3270 3160 642 60 0 0 chr2 23508810 23508893 -227178961 + (TC)n Simple_repeat Simple_repeat 1 83 0 183 270 135 0 chr2 23510527 23510601 -227177253 + L2 LINE L2 3126 3209 -63 207 370 8 8 chr2 23511034 23511153 -227176701 + (CACG)n Simple_repeat Simple_repeat 1 119 0 * 464 297 14 7 chr2 23511091 23511470 -227176384 + (CA)n Simple_repeat Simple_repeat 1 381 0 268 262 12 0 chr2 23511515 23511683 -227176171 + (CA)n Simple_repeat Simple_repeat 1 170 0 266 303 18 9 chr2 23511722 23511831 -227176023 + (CA)n Simple_repeat Simple_repeat 1 110 0 2393 70 3 0 chr2 23514073 23514374 -227173480 - AluY SINE Alu -9 302 1 823 169 0 15 chr2 23514401 23514537 -227173317 + AluJo SINE Alu 1 134 -178 730 217 17 22 chr2 23516267 23516447 -227171407 + MLT1H LTR MaLR 189 367 -182 2600 133 76 7 chr2 23516506 23516951 -227170903 + L1MB2 LINE L1 5696 6171 0 1452 201 143 39 chr2 23517047 23517480 -227170374 - MLT1H LTR MaLR 0 549 72 326 320 44 10 chr2 23517962 23518168 -227169686 - L2 LINE L2 -627 2687 2475 470 195 16 55 chr2 23519541 23519669 -227168185 - MIR3 SINE MIR -77 131 9 258 356 37 7 chr2 23520194 23520329 -227167525 - MIR SINE MIR -122 140 2 316 235 163 0 chr2 23520951 23521049 -227166805 - MIR SINE MIR -56 152 39 26 30 0 0 chr2 23522213 23522246 -227165608 + AT_rich Low_complexity Low_complexity 1 33 0 225 0 0 0 chr2 23522554 23522579 -227165275 + (TCC)n Simple_repeat Simple_repeat 1 25 0 499 318 28 28 chr2 23524218 23524397 -227163457 + MIR3 SINE MIR 11 189 -19 197 350 31 62 chr2 23524547 23524707 -227163147 - L2 LINE L2 -943 2371 2217 180 268 121 53 chr2 23525443 23525633 -227162221 - L2 LINE L2 -105 3167 2965 428 288 113 6 chr2 23528155 23528315 -227159539 - MIR3 SINE MIR -31 177 1 449 321 196 15 chr2 23531981 23532516 -227155338 + L2 LINE L2 2227 2858 -456 224 394 112 0 chr2 23532630 23532879 -227154975 + L2 LINE L2 2964 3240 -32 416 333 90 28 chr2 23537512 23538113 -227149741 + L2 LINE L2 1071 1708 -1606 1617 201 53 15 chr2 23538127 23538524 -227149330 - MER63B DNA MER1_type -24 412 1 209 211 35 35 chr2 23538562 23538619 -227149235 + L2 LINE L2 1754 1810 -1504 256 300 146 47 chr2 23538854 23539322 -227148532 + L2 LINE L2 2230 2753 -561 1946 158 0 14 chr2 23539322 23539619 -227148235 + AluJo SINE Alu 1 293 -19 256 300 146 47 chr2 23539619 23539657 -227148197 + L2 LINE L2 2753 2786 -528 2223 82 6 67 chr2 23539685 23540014 -227147840 - AluSp SINE Alu -4 309 1 1578 129 4 0 chr2 23540066 23540298 -227147556 - Tigger5 DNA MER2_type -5 2318 2086 238 139 0 0 chr2 23540320 23540356 -227147498 - Tigger5 DNA MER2_type -2261 62 27 315 339 35 71 chr2 23540376 23540742 -227147112 + L2 LINE L2 2897 3249 -23 2293 99 0 0 chr2 23542375 23542668 -227145186 + AluSx SINE Alu 1 293 -19 329 250 67 25 chr2 23542831 23542951 -227144903 + MIR3 SINE MIR 77 201 -7 2382 84 3 3 chr2 23543101 23543397 -227144457 + AluSg SINE Alu 1 296 -14 28 0 0 0 chr2 23546127 23546155 -227141699 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 23546464 23546489 -227141365 + AT_rich Low_complexity Low_complexity 1 25 0 2446 83 3 6 chr2 23546918 23547232 -227140622 - AluSp SINE Alu 0 313 1 235 211 144 62 chr2 23548028 23548222 -227139632 + L1M4 LINE L1 5191 5400 -746 300 229 29 0 chr2 23548512 23548582 -227139272 - MER2 DNA MER2_type -6 339 268 1302 144 10 0 chr2 23548608 23548816 -227139038 - MER2 DNA MER2_type -135 210 1 200 239 22 0 chr2 23548833 23548879 -227138975 - L2 LINE L2 -18 3254 3208 33 25 0 0 chr2 23549149 23549189 -227138665 + AT_rich Low_complexity Low_complexity 1 40 0 2367 98 0 16 chr2 23549244 23549561 -227138293 - AluSx SINE Alu 0 312 1 247 207 147 35 chr2 23549784 23549900 -227137954 - MIR SINE MIR -57 205 77 301 93 0 0 chr2 23550972 23551015 -227136839 - MADE1 DNA Mariner 0 80 38 2646 128 43 47 chr2 23551298 23551807 -227136047 - L1MB7 LINE L1 0 6184 5678 480 282 20 0 chr2 23551808 23551957 -227135897 + MER103 DNA DNA 9 160 -6 2510 63 0 3 chr2 23552130 23552430 -227135424 - AluY SINE Alu -12 299 1 2382 110 0 0 chr2 23552463 23552763 -227135091 + AluSx SINE Alu 1 300 -12 2383 72 3 3 chr2 23553183 23553476 -227134378 + AluY SINE Alu 1 293 -18 22 0 0 0 chr2 23553488 23553510 -227134344 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 23554329 23554364 -227133490 + (TTG)n Simple_repeat Simple_repeat 2 36 0 185 279 32 84 chr2 23554595 23554749 -227133105 + L2 LINE L2 1106 1251 -2063 284 365 46 27 chr2 23555901 23556120 -227131734 + L1MC2 LINE L1 5 227 -6313 2595 175 56 2 chr2 23556500 23556979 -227130875 - MLT1D LTR MaLR 0 505 1 643 242 26 86 chr2 23556996 23557298 -227130556 + L1MC2 LINE L1 922 1205 -5338 4397 160 13 4 chr2 23557299 23558004 -227129850 + L1M3f LINE L1 1 711 -4617 11199 158 43 94 chr2 23558018 23558182 -227129672 + L1MA5A LINE L1 14 185 -6604 2150 122 3 20 chr2 23558182 23558485 -227129369 + AluSx SINE Alu 1 298 -14 11199 158 43 94 chr2 23558485 23560765 -227127089 + L1MA5A LINE L1 185 2333 -4456 511 198 13 26 chr2 23560734 23560899 -227126955 + L1MA5A LINE L1 5811 5972 -816 * 1916 167 0 3 chr2 23560900 23561193 -227126661 + AluJb SINE Alu 1 292 -20 477 233 13 6 chr2 23561224 23561383 -227126471 + G-rich Low_complexity Low_complexity 3 162 0 4940 111 23 14 chr2 23561397 23562298 -227125556 + L1MA5A LINE L1 5963 6935 -4 2801 226 96 36 chr2 23562324 23562652 -227125202 + L1MC2 LINE L1 1427 1734 -4806 2722 46 0 0 chr2 23562652 23562957 -227124897 + AluY SINE Alu 1 305 -6 2801 226 96 36 chr2 23562957 23563688 -227124166 + L1MC2 LINE L1 1734 2550 -3990 2721 132 93 137 chr2 23563695 23564114 -227123740 + L1MB2 LINE L1 5444 5817 -354 2305 136 64 33 chr2 23564114 23564534 -227123320 - Tigger2a DNA MER2_type 0 434 2 2721 132 93 137 chr2 23564534 23564873 -227122981 + L1MB2 LINE L1 5817 6169 -2 328 217 38 57 chr2 23564870 23565027 -227122827 + L1MC2 LINE L1 2573 2726 -3995 * 5633 159 54 13 chr2 23565029 23566147 -227121707 + L1MC2 LINE L1 5582 6737 -1 906 226 50 81 chr2 23566150 23566728 -227121126 + L1MC4a LINE L1 5889 6483 -1325 2377 92 169 5 chr2 23566728 23567096 -227120758 - MSTA LTR MaLR 0 428 1 906 226 50 81 chr2 23567096 23567107 -227120747 + L1MC4a LINE L1 6483 6493 -1315 1574 190 145 18 chr2 23567107 23567549 -227120305 + LTR54B LTR ERV1 1 498 0 906 226 50 81 chr2 23567549 23567573 -227120281 + L1MC4a LINE L1 6493 6538 -1270 2734 216 99 46 chr2 23567581 23568275 -227119579 + L1MDa LINE L1 2666 3432 -3108 2656 68 0 0 chr2 23568275 23568586 -227119268 + AluY SINE Alu 1 311 0 2734 216 99 46 chr2 23568586 23568900 -227118954 + L1MDa LINE L1 3432 3728 -2812 1966 194 47 87 chr2 23568907 23569436 -227118418 + L1MC5 LINE L1 6834 7328 -633 1135 141 141 24 chr2 23569436 23569594 -227118260 - MER33 DNA MER1_type -2261 324 186 1346 178 75 68 chr2 23569594 23569887 -227117967 + AluJo SINE Alu 1 295 -17 1135 141 141 24 chr2 23569887 23570018 -227117836 - MER33 DNA MER1_type -2399 186 1 1966 194 47 87 chr2 23570018 23570209 -227117645 + L1MC5 LINE L1 7328 7525 -436 269 294 93 52 chr2 23570291 23570485 -227117369 + L1ME3A LINE L1 5962 6163 -7 690 263 56 16 chr2 23570727 23570978 -227116876 + MIR SINE MIR 2 262 0 468 324 149 29 chr2 23571359 23571803 -227116051 + L2 LINE L2 2174 2670 -644 229 318 85 102 chr2 23571839 23571993 -227115861 + L2 LINE L2 2918 3073 -199 2155 117 112 50 chr2 23571993 23572049 -227115805 - MSTA LTR MaLR 0 428 377 2165 116 3 10 chr2 23572049 23572350 -227115504 - AluSx SINE Alu -13 299 1 2155 117 112 50 chr2 23572350 23572696 -227115158 - MSTA LTR MaLR -51 377 1 229 318 85 102 chr2 23572696 23572893 -227114961 + L2 LINE L2 3073 3263 -9 324 295 16 25 chr2 23574081 23574203 -227113651 - HAL1 LINE L1 -1753 754 634 834 223 54 12 chr2 23574219 23574461 -227113393 + HAL1 LINE L1 800 1051 -1456 * 45526 35 1 1 chr2 23574459 23580608 -227107246 + L1PA4 LINE L1 13 6155 0 401 300 90 9 chr2 23580747 23580970 -227106884 + HAL1 LINE L1 1284 1524 -983 1313 226 100 102 chr2 23580996 23581175 -227106679 + HAL1 LINE L1 1769 1947 -560 2119 102 27 14 chr2 23581175 23581469 -227106385 + AluSx SINE Alu 1 298 -14 1313 226 100 102 chr2 23581469 23581527 -227106327 + HAL1 LINE L1 1947 2004 -503 1702 154 7 7 chr2 23581527 23581799 -227106055 - AluJo SINE Alu -23 289 18 1313 226 100 102 chr2 23581799 23582299 -227105555 + HAL1 LINE L1 2004 2506 -1 887 263 0 26 chr2 23582380 23582612 -227105242 - MIR SINE MIR -4 258 33 1972 122 0 4 chr2 23582894 23583172 -227104682 + AluSx SINE Alu 1 277 -35 228 130 0 0 chr2 23583174 23583220 -227104634 + (CAAG)n Simple_repeat Simple_repeat 3 48 0 790 37 0 59 chr2 23583235 23583371 -227104483 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 584 292 84 0 chr2 23583418 23583620 -227104234 + MIR SINE MIR 16 234 -28 346 226 28 19 chr2 23583689 23583795 -227104059 + L2 LINE L2 3168 3274 -39 188 261 46 0 chr2 23583884 23583949 -227103905 + L2 LINE L2 2909 2976 -296 888 194 116 41 chr2 23584109 23584351 -227103503 + MIR SINE MIR 2 261 -1 200 305 84 21 chr2 23584358 23584453 -227103401 + L2 LINE L2 3163 3263 -9 562 233 0 0 chr2 23584828 23584948 -227102906 + L2 LINE L2 3193 3312 -1 266 119 45 15 chr2 23585189 23585256 -227102598 + (TA)n Simple_repeat Simple_repeat 1 69 0 236 303 124 0 chr2 23585558 23585647 -227102207 + L2 LINE L2 3143 3242 -30 22 0 0 0 chr2 23587814 23587836 -227100018 + AT_rich Low_complexity Low_complexity 1 22 0 250 162 27 0 chr2 23590337 23590411 -227097443 + (TA)n Simple_repeat Simple_repeat 1 76 0 590 214 103 0 chr2 23590446 23590572 -227097282 - MIR SINE MIR -104 158 20 353 257 89 10 chr2 23591196 23591297 -227096557 + L2 LINE L2 3190 3298 -15 257 317 14 35 chr2 23591377 23591519 -227096335 + L3 LINE CR1 1275 1413 -164 273 357 123 6 chr2 23594705 23594876 -227092978 - MIR SINE MIR -25 237 47 267 271 156 10 chr2 23598156 23598252 -227089602 + L2 LINE L2 3201 3310 -3 2004 142 0 10 chr2 23598269 23598579 -227089275 + AluSx SINE Alu 1 307 -5 585 42 0 0 chr2 23598590 23598662 -227089192 + (CA)n Simple_repeat Simple_repeat 2 73 0 1312 113 0 10 chr2 23599246 23599441 -227088413 + MER46A DNA MER2_type 44 236 0 416 301 58 90 chr2 23600641 23601140 -227086714 + L2 LINE L2 2014 2496 -818 2081 200 20 38 chr2 23601181 23601234 -227086620 - L1MB8 LINE L1 -192 5986 5934 472 229 8 0 chr2 23601234 23601352 -227086502 - L1MB7 LINE L1 -10 6174 6056 2081 200 20 38 chr2 23601352 23601487 -227086367 - L1MB8 LINE L1 -244 5934 5798 1776 176 0 7 chr2 23601487 23601782 -227086072 - AluJo SINE Alu -19 293 1 2081 200 20 38 chr2 23601782 23602097 -227085757 - L1MB8 LINE L1 -380 5798 5550 381 278 19 28 chr2 23602213 23602321 -227085533 - MER5A DNA MER1_type -3 186 80 273 289 123 8 chr2 23602387 23602589 -227085265 - L2 LINE L2 -3 3310 3030 229 311 66 78 chr2 23602687 23602944 -227084910 + L2 LINE L2 2923 3176 -96 317 338 34 81 chr2 23604680 23604914 -227082940 - L2 LINE L2 -173 3099 2877 1774 189 153 27 chr2 23604919 23605395 -227082459 + LTR10A LTR ERV1 13 548 -61 706 326 65 41 chr2 23605493 23605780 -227082074 - L2 LINE L2 -611 2703 2401 182 62 31 0 chr2 23605780 23605812 -227082042 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 706 326 65 41 chr2 23605812 23605938 -227081916 - L2 LINE L2 -913 2401 2280 1357 245 20 69 chr2 23606029 23606143 -227081711 - L1ME1 LINE L1 -12 6227 6109 1489 144 6 117 chr2 23606143 23606476 -227081378 + AluJo SINE Alu 1 296 -6 1357 245 20 69 chr2 23606476 23606948 -227080906 - L1ME1 LINE L1 -130 6109 5675 414 216 10 62 chr2 23606951 23607048 -227080806 + MER2 DNA MER2_type 6 97 -248 2065 89 4 7 chr2 23607048 23607329 -227080525 + AluSg SINE Alu 1 280 -30 30 0 0 0 chr2 23607329 23607359 -227080495 + AT_rich Low_complexity Low_complexity 1 30 0 1095 186 33 89 chr2 23607429 23607602 -227080252 - L1ME1 LINE L1 -562 5673 5492 1733 118 114 7 chr2 23607602 23607873 -227079981 - AluSg1 SINE Alu -9 300 1 1095 186 33 89 chr2 23607873 23607919 -227079935 - L1ME1 LINE L1 -743 5492 5445 2069 111 7 21 chr2 23607919 23608238 -227079616 + AluSx SINE Alu 3 317 0 1095 186 33 89 chr2 23608238 23608379 -227079475 - L1ME1 LINE L1 -790 5445 5322 * 3322 226 82 13 chr2 23608372 23609342 -227078512 - L1ME1 LINE L1 -1115 5100 4064 482 161 117 72 chr2 23609443 23609623 -227078231 - L1ME1 LINE L1 -4121 2275 2088 * 1534 246 74 32 chr2 23609621 23610096 -227077758 - L1ME1 LINE L1 -5863 533 39 354 253 27 33 chr2 23610119 23610269 -227077585 - L1ME4a LINE L1 -279 5842 5694 1514 167 10 48 chr2 23610638 23610931 -227076923 - AluJo SINE Alu -30 282 1 1441 182 14 67 chr2 23611113 23611410 -227076444 + AluJo SINE Alu 1 281 -31 303 256 56 72 chr2 23611642 23611767 -227076087 + MIR SINE MIR 29 151 -111 1552 206 16 16 chr2 23612062 23612368 -227075486 + AluJo SINE Alu 1 306 -6 2268 116 0 0 chr2 23612507 23612817 -227075037 + AluSq SINE Alu 1 310 -3 2177 93 4 0 chr2 23613086 23613401 -227074453 - AluSc SINE Alu 0 316 1 360 297 203 17 chr2 23613617 23613750 -227074104 + L2 LINE L2 2132 2239 -1075 2059 86 4 0 chr2 23613750 23614029 -227073825 + AluSc SINE Alu 25 304 0 360 297 203 17 chr2 23614029 23614184 -227073670 + L2 LINE L2 2239 2475 -839 1777 158 70 57 chr2 23614783 23615168 -227072686 + MLT1B LTR MaLR 1 390 0 228 143 0 0 chr2 23615237 23615279 -227072575 + (TA)n Simple_repeat Simple_repeat 2 43 0 208 306 0 0 chr2 23616482 23616544 -227071310 - MIR SINE MIR -3 259 198 240 88 0 0 chr2 23616557 23616591 -227071263 + MER116 DNA Mariner 47 80 0 632 265 54 6 chr2 23616599 23616765 -227071089 - MIR SINE MIR -70 192 19 455 304 103 38 chr2 23616849 23617033 -227070821 + MER91A DNA MER1_type 1 196 0 2527 77 0 0 chr2 23617053 23617364 -227070490 - AluY SINE Alu 0 311 1 495 262 40 20 chr2 23617388 23617590 -227070264 + L1ME LINE L1 5563 5768 -353 1699 172 3 14 chr2 23617852 23618148 -227069706 + AluJo SINE Alu 1 293 -19 333 0 0 0 chr2 23618157 23618194 -227069660 + (TG)n Simple_repeat Simple_repeat 2 38 0 183 275 0 0 chr2 23618437 23618477 -227069377 - MER5B DNA MER1_type -138 40 1 2059 119 7 13 chr2 23618507 23618810 -227069044 + AluSx SINE Alu 1 301 -11 1625 162 101 204 chr2 23618924 23619219 -227068635 + MER90 LTR ERV1 1 325 -289 417 20 0 0 chr2 23619219 23619269 -227068585 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2108 134 0 0 chr2 23619272 23619571 -227068283 + AluSx SINE Alu 1 299 -13 1625 162 101 204 chr2 23619571 23619691 -227068163 + MER90 LTR ERV1 327 458 -156 1871 168 0 13 chr2 23619691 23620006 -227067848 - AluJb SINE Alu -1 311 1 1625 162 101 204 chr2 23620006 23620270 -227067584 + MER90 LTR ERV1 458 614 0 29 60 0 0 chr2 23621001 23621051 -227066803 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr2 23622604 23622628 -227065226 + AT_rich Low_complexity Low_complexity 1 24 0 274 265 44 0 chr2 23622829 23622897 -227064957 + MIR SINE MIR 120 190 -72 2184 129 42 3 chr2 23624214 23624548 -227063306 - MER7A DNA MER2_type 0 346 2 25 65 0 0 chr2 23624643 23624689 -227063165 + AT_rich Low_complexity Low_complexity 1 46 0 308 341 61 15 chr2 23627267 23627399 -227060455 + L2 LINE L2 3134 3271 -1 475 218 82 9 chr2 23627655 23627765 -227060089 - MIR SINE MIR -71 191 74 2690 186 127 17 chr2 23628740 23629338 -227058516 - L1MB8 LINE L1 -61 6117 5433 340 139 38 38 chr2 23629338 23629417 -227058437 + MADE1 DNA Mariner 1 79 -1 2690 186 127 17 chr2 23629417 23629506 -227058348 - L1MB8 LINE L1 -745 5433 5355 2425 166 55 7 chr2 23629500 23629957 -227057897 - L1MB3 LINE L1 -242 5941 5463 * 2068 93 54 0 chr2 23629957 23630236 -227057618 - AluY SINE Alu -17 294 1 2475 77 0 3 chr2 23630570 23630880 -227056974 + AluY SINE Alu 1 309 -2 21 36 0 0 chr2 23631475 23631503 -227056351 + AT_rich Low_complexity Low_complexity 1 28 0 254 325 12 0 chr2 23631584 23631664 -227056190 - L2 LINE L2 -5 3267 3187 1093 171 157 51 chr2 23631689 23631905 -227055949 - Charlie1 DNA MER1_type 0 2761 2569 1984 146 10 0 chr2 23631905 23632199 -227055655 - AluJb SINE Alu -15 297 1 1093 171 157 51 chr2 23632199 23632428 -227055426 - Charlie1 DNA MER1_type -192 2569 1 306 171 86 71 chr2 23632436 23632576 -227055278 - Charlie7 DNA MER1_type 0 2612 2471 354 244 101 6 chr2 23632997 23633165 -227054689 - L1ME4a LINE L1 0 6121 5938 395 214 0 0 chr2 23633216 23633286 -227054568 - AluJ/FRAM SINE Alu -3 299 230 2289 110 7 0 chr2 23633488 23633798 -227054056 + AluSx SINE Alu 1 312 0 860 139 8 0 chr2 23633841 23633963 -227053891 + FLAM_C SINE Alu 1 123 -20 251 247 49 12 chr2 23634713 23634794 -227053060 - MIR SINE MIR -107 155 72 1762 134 106 12 chr2 23635443 23635772 -227052082 - MER46B DNA MER2_type -1 235 1 303 286 252 7 chr2 23635785 23635932 -227051922 - MIR SINE MIR -37 225 43 22 0 0 0 chr2 23635932 23635954 -227051900 + AT_rich Low_complexity Low_complexity 1 22 0 2335 103 7 0 chr2 23637180 23637490 -227050364 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 23637969 23637992 -227049862 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 23638706 23638728 -227049126 + AT_rich Low_complexity Low_complexity 1 22 0 190 191 24 0 chr2 23639067 23639109 -227048745 + MER5C DNA MER1_type 74 116 -208 21 57 0 0 chr2 23639594 23639629 -227048225 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 23640030 23640056 -227047798 + AT_rich Low_complexity Low_complexity 1 26 0 252 86 0 0 chr2 23641203 23641238 -227046616 + (CA)n Simple_repeat Simple_repeat 2 36 0 451 257 44 71 chr2 23641294 23641477 -227046377 + MER5A DNA MER1_type 9 186 -3 2231 108 0 9 chr2 23642747 23643062 -227044792 + AluSq SINE Alu 1 312 -1 444 296 57 61 chr2 23643247 23643511 -227044343 - L1MC4a LINE L1 -1921 5887 5625 2416 103 0 0 chr2 23693719 23694031 -226993823 - AluSx SINE Alu 0 312 1 449 175 185 37 chr2 23694151 23694340 -226993514 + L1MB8 LINE L1 5116 5332 -814 849 163 0 0 chr2 23694340 23694469 -226993385 + FLAM_C SINE Alu 1 129 -14 3011 163 113 39 chr2 23694474 23695223 -226992631 + L1MB8 LINE L1 5315 6007 -171 2272 121 0 0 chr2 23695223 23695520 -226992334 + AluSq SINE Alu 1 297 -16 3011 163 113 39 chr2 23695520 23695540 -226992314 + L1MB8 LINE L1 6007 6024 -154 8884 168 60 17 chr2 23695540 23697222 -226990632 - MER52A LTR ERV1 0 1755 1 3011 163 113 39 chr2 23697222 23697250 -226990604 + L1MB8 LINE L1 6024 6172 -6 620 265 71 18 chr2 23698147 23698430 -226989424 - L1MC4a LINE L1 -1089 5057 4760 969 303 35 25 chr2 23698726 23699247 -226988607 - L1MC4a LINE L1 -1909 4237 3712 1564 207 39 55 chr2 23699282 23699774 -226988080 - L1ME1 LINE L1 -4 6231 5748 255 229 49 57 chr2 23699942 23700064 -226987790 - L1ME1 LINE L1 -2895 3320 3200 567 268 59 55 chr2 23700143 23700489 -226987365 - L1ME1 LINE L1 -3364 2851 2501 1560 151 0 103 chr2 23700489 23700808 -226987046 - AluJb SINE Alu -16 286 1 567 268 59 55 chr2 23700808 23700968 -226986886 - L1ME1 LINE L1 -3714 2501 2343 * 1537 116 0 34 chr2 23700960 23701081 -226986773 - L1MB7 LINE L1 -236 5948 5824 1667 204 0 7 chr2 23701081 23701380 -226986474 - AluJo SINE Alu -11 301 5 1537 116 0 34 chr2 23701380 23701525 -226986329 - L1MB7 LINE L1 -360 5824 5691 487 267 25 4 chr2 23701533 23701785 -226986069 - L1ME1 LINE L1 -3851 2364 2148 1610 236 65 21 chr2 23702242 23702904 -226984950 + L1ME LINE L1 784 1515 -5073 292 262 7 12 chr2 23702916 23703055 -226984799 + L1ME LINE L1 1552 1836 -4885 2431 260 81 44 chr2 23703066 23703502 -226984352 + L1MEc LINE L1 236 654 -5742 2311 105 0 3 chr2 23703502 23703808 -226984046 - AluSx SINE Alu -7 305 1 2431 260 81 44 chr2 23703808 23704723 -226983131 + L1MEc LINE L1 654 1638 -4758 1632 227 70 39 chr2 23704725 23705139 -226982715 + L1MB7 LINE L1 5585 6023 -161 2161 141 0 0 chr2 23705139 23705444 -226982410 - AluJo SINE Alu -3 309 5 1632 227 70 39 chr2 23705444 23705601 -226982253 + L1MB7 LINE L1 6023 6174 -10 1151 185 58 29 chr2 23705614 23705708 -226982146 + AluJb SINE Alu 42 132 -180 2205 103 0 3 chr2 23705708 23705999 -226981855 + AluSg SINE Alu 1 290 -20 1151 185 58 29 chr2 23705999 23706147 -226981707 + AluJb SINE Alu 132 291 -21 2258 102 0 26 chr2 23706189 23706494 -226981360 + AluSg SINE Alu 1 297 -13 1144 227 139 15 chr2 23706561 23706705 -226981149 + L1MEc LINE L1 1730 1855 -4541 1794 129 85 0 chr2 23706705 23706977 -226980877 + AluSx SINE Alu 1 295 -17 1144 227 139 15 chr2 23706977 23707307 -226980547 + L1MEc LINE L1 1855 2263 -4133 297 243 7 79 chr2 23707317 23707469 -226980385 + L1MA10 LINE L1 6187 6327 -7 521 227 99 58 chr2 23707471 23707713 -226980141 + L1ME LINE L1 2385 2636 -3904 593 256 81 49 chr2 23707715 23708034 -226979820 + L1ME LINE L1 2660 2996 -3544 2094 111 17 0 chr2 23708034 23708323 -226979531 + AluSx SINE Alu 1 294 -18 593 256 81 49 chr2 23708323 23708413 -226979441 + L1ME LINE L1 2996 3082 -3458 1273 79 22 11 chr2 23708465 23708643 -226979211 + AluY SINE Alu 122 301 -10 891 185 46 46 chr2 23708656 23708981 -226978873 + L1ME LINE L1 3178 3502 -3038 1180 155 33 59 chr2 23708983 23709254 -226978600 + L1MC2 LINE L1 5839 6102 -242 1257 188 50 122 chr2 23709264 23709626 -226978228 + MLT1A1 LTR MaLR 1 327 -38 1686 182 17 3 chr2 23709634 23709925 -226977929 - AluJb SINE Alu -17 295 1 1297 202 65 12 chr2 23709937 23710259 -226977595 - L1MC1 LINE L1 0 6333 5995 4271 222 79 69 chr2 23710297 23710780 -226977074 + L1ME LINE L1 3546 4023 -2535 809 173 0 0 chr2 23710780 23710907 -226976947 - FLAM_C SINE Alu -4 129 3 4271 222 79 69 chr2 23710907 23711121 -226976733 + L1ME LINE L1 4023 4233 -2325 2259 104 0 0 chr2 23711121 23711419 -226976435 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 23711419 23712448 -226975406 + L1ME LINE L1 4233 5250 -1308 2136 125 3 0 chr2 23712448 23712745 -226975109 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 23712745 23712880 -226974974 + L1ME LINE L1 5250 5382 -1176 2280 101 0 0 chr2 23712880 23713178 -226974676 + AluSq SINE Alu 1 298 -15 4271 222 79 69 chr2 23713178 23713396 -226974458 + L1ME LINE L1 5382 5596 -962 2138 118 7 0 chr2 23713396 23713692 -226974162 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 23713692 23714120 -226973734 + L1ME LINE L1 5596 6083 -475 1504 192 0 8 chr2 23714124 23714379 -226973475 + AluJo SINE Alu 35 287 -25 2314 90 0 7 chr2 23714390 23714689 -226973165 + AluSg SINE Alu 1 297 -13 1084 199 0 5 chr2 23714689 23714900 -226972954 - MER46A DNA MER2_type -26 210 1 262 214 14 90 chr2 23714910 23715055 -226972799 + L1ME LINE L1 6097 6230 -330 2106 139 3 0 chr2 23715062 23715363 -226972491 + AluSx SINE Alu 1 302 -10 873 221 4 83 chr2 23715376 23715410 -226972444 - MER58A DNA MER1_type -2199 221 186 736 158 0 43 chr2 23715410 23715549 -226972305 + FLAM_C SINE Alu 1 133 0 873 221 4 83 chr2 23715549 23715754 -226972100 - MER58A DNA MER1_type -2234 186 1 28 61 0 0 chr2 23716003 23716052 -226971802 + AT_rich Low_complexity Low_complexity 1 49 0 2501 66 0 7 chr2 23716223 23716526 -226971328 - AluY SINE Alu -10 301 1 2271 98 0 0 chr2 23716576 23716904 -226970950 - AluSx SINE Alu 0 328 1 1740 166 37 7 chr2 23716970 23717266 -226970588 - AluJo SINE Alu -7 305 1 837 278 99 36 chr2 23717268 23717714 -226970140 - L1MC1 LINE L1 -1983 5825 5352 240 35 0 0 chr2 23717773 23717802 -226970052 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1198 176 10 0 chr2 23717806 23718005 -226969849 - AluJb SINE Alu -25 287 87 1265 181 75 80 chr2 23718097 23718149 -226969705 + MSTD LTR MaLR 1 52 -344 2250 96 0 7 chr2 23718149 23718450 -226969404 + AluSx SINE Alu 1 299 -13 1265 181 75 80 chr2 23718450 23718784 -226969070 + MSTD LTR MaLR 52 385 -11 2125 127 0 0 chr2 23719172 23719477 -226968377 + AluSq SINE Alu 1 305 0 281 156 0 0 chr2 23719531 23719576 -226968278 + AluJb SINE Alu 1 45 -258 315 374 96 0 chr2 23719683 23719902 -226967952 - MIR SINE MIR -21 241 2 21 0 0 0 chr2 23719959 23719980 -226967874 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 23720164 23720185 -226967669 + AT_rich Low_complexity Low_complexity 1 21 0 1693 188 20 0 chr2 23720402 23720694 -226967160 + AluJo SINE Alu 1 298 -14 899 201 6 6 chr2 23720885 23721059 -226966795 - FRAM SINE Alu -3 173 1 1347 167 4 28 chr2 23721559 23721810 -226966044 + AluJb SINE Alu 52 296 -16 186 71 0 0 chr2 23721810 23721838 -226966016 + (CAGAA)n Simple_repeat Simple_repeat 2 29 0 1969 119 53 0 chr2 23722503 23722788 -226965066 - AluSx SINE Alu -12 300 1 25 31 0 0 chr2 23723190 23723222 -226964632 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 23723441 23723480 -226964374 + AT_rich Low_complexity Low_complexity 1 39 0 26 50 0 0 chr2 23723677 23723717 -226964137 + AT_rich Low_complexity Low_complexity 1 40 0 2340 90 0 0 chr2 23723730 23724029 -226963825 + AluSq SINE Alu 1 299 -14 22 0 0 0 chr2 23724040 23724062 -226963792 + AT_rich Low_complexity Low_complexity 1 22 0 733 168 0 39 chr2 23724065 23724220 -226963634 + MER106B DNA MER1_type 1 149 -910 2363 91 7 3 chr2 23724607 23724914 -226962940 + AluSp SINE Alu 1 308 -5 488 314 65 90 chr2 23725474 23726028 -226961826 + L2 LINE L2 2182 2721 -593 1515 171 105 0 chr2 23726800 23727057 -226960797 - AluJo SINE Alu -28 284 1 21 0 0 0 chr2 23727385 23727406 -226960448 + AT_rich Low_complexity Low_complexity 1 21 0 2060 118 3 0 chr2 23728431 23728718 -226959136 + AluSg SINE Alu 21 308 -2 1946 154 7 0 chr2 23728769 23729068 -226958786 - AluJb SINE Alu -11 301 1 204 283 38 47 chr2 23729788 23729894 -226957960 + L2 LINE L2 791 895 -2419 2184 130 0 0 chr2 23730360 23730659 -226957195 - AluSg SINE Alu -11 299 1 419 159 0 34 chr2 23730661 23730749 -226957105 - AluJ/FRAM SINE Alu -8 304 220 631 197 7 56 chr2 23731844 23731986 -226955868 + MER2 DNA MER2_type 1 135 -210 444 195 18 2 chr2 23732022 23732204 -226955650 + MER2 DNA MER2_type 121 345 0 2098 131 0 0 chr2 23732388 23732686 -226955168 + AluSx SINE Alu 1 298 -14 715 177 47 5 chr2 23732728 23732920 -226954934 + L1M4 LINE L1 4966 5165 -981 1765 150 92 0 chr2 23732920 23733193 -226954661 + AluJb SINE Alu 1 298 -14 2297 95 0 0 chr2 23733258 23733554 -226954300 + AluY SINE Alu 1 296 -15 2104 119 3 23 chr2 23733703 23734005 -226953849 + AluSg SINE Alu 1 296 -14 2311 96 0 0 chr2 23734474 23734775 -226953079 - AluSc SINE Alu -8 301 1 2328 97 0 0 chr2 23734783 23735083 -226952771 - AluSg SINE Alu -10 300 1 2463 87 3 0 chr2 23735269 23735580 -226952274 + AluSp SINE Alu 1 312 -1 380 211 11 11 chr2 23735640 23735730 -226952124 + FLAM_C SINE Alu 29 118 -15 1624 107 4 43 chr2 23735734 23735968 -226951886 + AluSx SINE Alu 49 273 -39 642 104 0 0 chr2 23735969 23736065 -226951789 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 1879 123 55 3 chr2 23736072 23736365 -226951489 + AluSx SINE Alu 1 308 -4 483 153 382 0 chr2 23736392 23736523 -226951331 + AluJb SINE Alu 132 312 0 1727 185 62 58 chr2 23736525 23736562 -226951292 + L1ME LINE L1 5128 5163 -1003 2172 122 0 0 chr2 23736562 23736850 -226951004 + AluSx SINE Alu 1 288 -24 2306 67 0 3 chr2 23736860 23737173 -226950681 + AluY SINE Alu 1 312 0 1727 185 62 58 chr2 23737173 23737800 -226950054 + L1ME LINE L1 5171 5819 -347 1184 238 27 47 chr2 23737814 23738112 -226949742 + AluJo SINE Alu 2 293 -9 264 259 12 37 chr2 23738157 23738238 -226949616 + MIR SINE MIR 42 120 -88 2098 127 10 10 chr2 23738256 23738556 -226949298 + AluSx SINE Alu 1 300 -12 519 66 0 0 chr2 23738845 23738906 -226948948 - AluY SINE Alu -185 126 66 1209 97 0 0 chr2 23738906 23739060 -226948794 + AluY SINE Alu 142 295 -16 2213 92 13 7 chr2 23739841 23740144 -226947710 - AluSc SINE Alu -4 305 1 2088 126 3 0 chr2 23740209 23740494 -226947360 - AluSq SINE Alu -15 298 13 801 155 0 63 chr2 23740562 23740680 -226947174 + FLAM_A SINE Alu 1 110 -192 2036 134 27 0 chr2 23740680 23740979 -226946875 - AluSx SINE Alu -5 307 1 801 155 0 63 chr2 23740979 23741002 -226946852 + FLAM_A SINE Alu 110 133 -169 2247 94 3 7 chr2 23741010 23741318 -226946536 + AluY SINE Alu 1 307 -4 1868 168 0 19 chr2 23741547 23741856 -226945998 + AluJb SINE Alu 1 303 -9 2154 116 0 0 chr2 23742417 23742710 -226945144 + AluSq SINE Alu 1 293 -20 189 114 29 29 chr2 23743511 23743546 -226944308 - L2 LINE L2 -10 3303 3269 1899 144 0 3 chr2 23744495 23744779 -226943075 - AluJb SINE Alu -7 305 23 23 54 0 0 chr2 23744883 23744920 -226942934 + AT_rich Low_complexity Low_complexity 1 37 0 30 77 0 0 chr2 23745046 23745111 -226942743 + AT_rich Low_complexity Low_complexity 1 65 0 2427 85 0 0 chr2 23745205 23745511 -226942343 + AluY SINE Alu 1 306 -5 561 225 42 0 chr2 23745532 23745552 -226942302 - FLAM_A SINE Alu -186 125 107 1817 110 68 4 chr2 23745552 23745815 -226942039 + AluSg SINE Alu 2 281 -29 561 225 42 0 chr2 23745815 23745914 -226941940 - FLAM_A SINE Alu -204 107 1 22 0 0 0 chr2 23745923 23745945 -226941909 + AT_rich Low_complexity Low_complexity 1 22 0 2273 89 0 0 chr2 23747742 23748023 -226939831 - AluSx SINE Alu -31 281 1 2126 107 10 0 chr2 23748354 23748645 -226939209 + AluSx SINE Alu 1 294 -18 2501 70 0 3 chr2 23748647 23748959 -226938895 + AluY SINE Alu 1 311 0 242 324 86 0 chr2 23749146 23749251 -226938603 - MARNA DNA Mariner -77 509 396 * 764 304 79 22 chr2 23749189 23749557 -226938297 + MARNA DNA Mariner 125 513 -73 2297 107 3 0 chr2 23749735 23750034 -226937820 - AluSx SINE Alu -12 300 1 1888 119 22 53 chr2 23750199 23750517 -226937337 - AluSx SINE Alu -4 308 1 2528 44 0 3 chr2 23750879 23751176 -226936678 - AluY SINE Alu -13 298 3 2192 133 7 0 chr2 23751176 23751484 -226936370 - AluSx SINE Alu -2 310 1 25 31 0 0 chr2 23751695 23751727 -226936127 + AT_rich Low_complexity Low_complexity 1 32 0 1621 153 41 24 chr2 23752382 23752677 -226935177 - AluJo SINE Alu -12 300 1 2107 108 54 0 chr2 23752914 23753210 -226934644 + AluSp SINE Alu 1 312 -1 26 50 0 0 chr2 23753864 23753904 -226933950 + AT_rich Low_complexity Low_complexity 1 40 0 2023 109 10 30 chr2 23754751 23755055 -226932799 + AluSx SINE Alu 1 298 -14 4117 226 90 14 chr2 23755290 23755569 -226932285 - L1MC4 LINE L1 -191 7851 7595 1658 117 78 32 chr2 23755569 23755851 -226932003 + AluSx SINE Alu 1 295 -17 4117 226 90 14 chr2 23755851 23756688 -226931166 - L1MC4 LINE L1 -447 7595 6650 1400 187 97 4 chr2 23756689 23756957 -226930897 - AluJo SINE Alu -19 293 1 2370 166 37 21 chr2 23756959 23757387 -226930467 + MER4E LTR ERV1 343 777 -2 1467 162 29 76 chr2 23757435 23757581 -226930273 + AluJo SINE Alu 1 126 -186 2198 94 11 0 chr2 23757581 23757868 -226929986 + AluSq SINE Alu 1 290 -23 1467 162 29 76 chr2 23757868 23758036 -226929818 + AluJo SINE Alu 126 300 -12 2218 121 0 0 chr2 23758303 23758601 -226929253 - AluSg SINE Alu -10 300 3 2308 88 20 7 chr2 23758624 23758930 -226928924 - AluSg SINE Alu 0 310 1 620 165 55 0 chr2 23758937 23759080 -226928774 - FLAM_C SINE Alu 0 150 2 184 375 0 0 chr2 23759124 23759188 -226928666 - L3 LINE CR1 -7 1570 1507 547 238 156 31 chr2 23759195 23759355 -226928499 + MER5A DNA MER1_type 9 188 -1 22 0 0 0 chr2 23760339 23760361 -226927493 + AT_rich Low_complexity Low_complexity 1 22 0 288 221 168 0 chr2 23760380 23760475 -226927379 + MER103 DNA DNA 6 116 -50 319 283 201 19 chr2 23760740 23760899 -226926955 + MER5A DNA MER1_type 2 189 0 217 270 162 0 chr2 23761412 23761486 -226926368 - L2 LINE L2 -5 3267 3182 734 174 17 0 chr2 23761498 23761637 -226926217 + FLAM_C SINE Alu 1 141 0 1711 166 11 7 chr2 23761669 23761984 -226925870 + AluJo SINE Alu 1 316 0 300 53 0 0 chr2 23762654 23762692 -226925162 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1795 177 3 22 chr2 23763950 23764261 -226923593 + AluJb SINE Alu 1 305 -7 227 290 178 37 chr2 23764491 23764598 -226923256 - L2 LINE L2 0 3272 3151 318 231 111 60 chr2 23764649 23764766 -226923088 + L1ME LINE L1 5541 5637 -484 2129 117 0 13 chr2 23764769 23765069 -226922785 + AluSx SINE Alu 1 296 -16 1048 39 0 0 chr2 23765191 23765320 -226922534 - L1P LINE L1 -3471 2675 2547 15493 30 12 1 chr2 23765320 23767859 -226919995 + L1PA3 LINE L1 3628 6155 0 954 161 8 4 chr2 23767919 23768127 -226919727 + AluJb SINE Alu 2 286 -26 315 267 70 0 chr2 23768132 23768218 -226919636 - L1MC4 LINE L1 -1339 6703 6612 1660 179 19 16 chr2 23768567 23768874 -226918980 - AluJo SINE Alu 0 312 5 2391 86 3 3 chr2 23768888 23769192 -226918662 - AluSp SINE Alu -9 304 1 2075 125 3 0 chr2 23769300 23769588 -226918266 + AluSx SINE Alu 1 289 -23 2201 93 24 0 chr2 23769658 23769948 -226917906 + AluSp SINE Alu 1 297 -16 1895 176 3 3 chr2 23769985 23770297 -226917557 + AluJb SINE Alu 1 312 0 180 77 0 0 chr2 23770309 23770335 -226917519 + (AGGGGG)n Simple_repeat Simple_repeat 5 30 0 2197 116 0 7 chr2 23770413 23770707 -226917147 + AluSx SINE Alu 9 300 -12 1030 233 43 16 chr2 23770718 23770927 -226916927 + L1M4 LINE L1 2627 2848 -3298 1719 161 16 48 chr2 23770927 23771243 -226916611 + AluJo SINE Alu 1 306 -6 1030 233 43 16 chr2 23771243 23771338 -226916516 + L1M4 LINE L1 2848 2939 -3207 1896 142 0 17 chr2 23771421 23771733 -226916121 + AluSx SINE Alu 1 307 0 225 250 75 25 chr2 23771837 23771917 -226915937 + L1 LINE L1 2660 2743 -3403 2321 89 7 13 chr2 23772066 23772370 -226915484 + AluSx SINE Alu 1 302 -10 823 142 14 7 chr2 23772545 23772686 -226915168 + FRAM SINE Alu 13 154 -22 560 152 191 9 chr2 23772701 23772806 -226915048 + FLAM_C SINE Alu 3 126 -17 239 229 0 0 chr2 23772980 23773028 -226914826 - MER112 DNA MER1_type -183 77 30 348 317 114 46 chr2 23773204 23773270 -226914584 + L1ME3A LINE L1 5461 5521 -649 2364 56 7 13 chr2 23773270 23773572 -226914282 + AluY SINE Alu 1 300 -11 348 317 114 46 chr2 23773572 23773899 -226913955 + L1ME3A LINE L1 5521 5881 -289 242 175 0 0 chr2 23774068 23774108 -226913746 + MER94 DNA DNA 95 134 0 419 197 13 26 chr2 23774216 23774292 -226913562 - FRAM/FAM SINE Alu -103 73 1 2346 88 10 3 chr2 23774296 23774603 -226913251 - AluSg SINE Alu -1 309 1 253 254 91 55 chr2 23775599 23775709 -226912145 + L2 LINE L2 3113 3226 -46 252 211 88 0 chr2 23775741 23775798 -226912056 - MER91C DNA MER1_type -38 102 41 198 245 0 38 chr2 23775814 23775867 -226911987 - L2 LINE L2 -80 3233 3183 195 42 0 0 chr2 23775882 23775906 -226911948 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 787 180 0 8 chr2 23776358 23776486 -226911368 + FLAM_A SINE Alu 1 127 -6 2193 93 40 0 chr2 23776489 23776790 -226911064 + AluSp SINE Alu 1 313 0 1629 185 7 20 chr2 23776797 23777089 -226910765 + AluJo SINE Alu 1 288 -24 207 265 0 0 chr2 23777126 23777194 -226910660 + A-rich Low_complexity Low_complexity 3 70 0 460 261 111 13 chr2 23777559 23777712 -226910142 + MIR SINE MIR 89 256 -6 827 171 0 16 chr2 23777773 23777902 -226909952 + FLAM_C SINE Alu 1 127 -6 1775 160 32 0 chr2 23777984 23778265 -226909589 + AluJb SINE Alu 1 290 -22 2128 130 0 7 chr2 23778273 23778574 -226909280 + AluSq SINE Alu 1 299 -14 2156 118 0 0 chr2 23778581 23778878 -226908976 + AluSx SINE Alu 1 297 -15 212 308 128 0 chr2 23778880 23778958 -226908896 - L2 LINE L2 -18 3295 3208 438 215 0 114 chr2 23779212 23779361 -226908493 - L2 LINE L2 0 3313 3182 1695 182 3 3 chr2 23779635 23779942 -226907912 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr2 23780748 23780774 -226907080 + AT_rich Low_complexity Low_complexity 1 26 0 422 236 9 0 chr2 23781230 23781336 -226906518 + L1MA10 LINE L1 5198 5304 -842 458 120 213 0 chr2 23781353 23781428 -226906426 + FRAM SINE Alu 71 161 -15 4371 156 64 42 chr2 23781453 23782363 -226905491 + L1MA10 LINE L1 5376 6305 -29 2438 43 7 3 chr2 23782612 23782913 -226904941 + AluY SINE Alu 1 302 -9 2127 135 0 0 chr2 23786595 23786953 -226900901 + AluSx SINE Alu 1 358 0 2354 80 0 3 chr2 23787008 23787296 -226900558 + AluSx SINE Alu 14 300 -12 798 148 16 0 chr2 23787710 23787832 -226900022 + FLAM_C SINE Alu 2 125 -18 865 143 0 0 chr2 23787842 23787968 -226899886 - AluJb SINE Alu -30 282 157 862 166 13 38 chr2 23787973 23788130 -226899724 + AluJb SINE Alu 154 306 -6 2312 96 3 3 chr2 23788135 23788437 -226899417 + AluSq SINE Alu 5 306 -7 2215 112 0 0 chr2 23788593 23788887 -226898967 - AluY SINE Alu -15 296 3 532 103 0 0 chr2 23788919 23788987 -226898867 + FLAM SINE Alu 63 130 -13 961 188 102 109 chr2 23789278 23789582 -226898272 + AluJo SINE Alu 1 302 0 1661 141 58 14 chr2 23789586 23789863 -226897991 + AluSg1 SINE Alu 1 289 -20 1789 158 23 16 chr2 23789867 23790171 -226897683 + AluSx SINE Alu 1 306 -6 2307 112 0 0 chr2 23790432 23790736 -226897118 + AluSg SINE Alu 1 304 -6 2133 122 0 29 chr2 23790739 23791050 -226896804 + AluSg SINE Alu 1 302 -8 343 367 100 4 chr2 23791275 23791515 -226896339 + L1MEd LINE L1 459 721 -5398 2152 107 3 3 chr2 23791527 23791818 -226896036 + AluY SINE Alu 3 293 -18 22 0 0 0 chr2 23791818 23791840 -226896014 + AT_rich Low_complexity Low_complexity 1 22 0 2377 103 3 0 chr2 23791926 23792238 -226895616 + AluSp SINE Alu 1 313 0 1122 166 6 0 chr2 23792272 23792453 -226895401 + FRAM SINE Alu 1 176 0 2269 99 17 0 chr2 23792635 23792929 -226894925 + AluSx SINE Alu 1 299 -13 947 159 143 0 chr2 23792947 23793129 -226894725 - MER3 DNA MER1_type -1 208 1 2240 123 0 3 chr2 23793493 23793795 -226894059 + AluSx SINE Alu 1 301 -11 3277 166 25 86 chr2 23793795 23794470 -226893384 + L1MB4 LINE L1 4996 5711 -469 1902 131 7 7 chr2 23794470 23794783 -226893071 + AluSx SINE Alu 2 314 0 3277 166 25 86 chr2 23794783 23795129 -226892725 + L1MB4 LINE L1 5711 5954 -226 727 193 0 15 chr2 23795129 23795264 -226892590 + FLAM_C SINE Alu 1 133 0 3277 166 25 86 chr2 23795264 23795309 -226892545 + L1MB4 LINE L1 5954 6000 -180 491 179 0 21 chr2 23795329 23795424 -226892430 + L1M4 LINE L1 4012 4104 -2042 2309 90 0 0 chr2 23795424 23795712 -226892142 - AluSx SINE Alu -24 288 1 824 168 0 28 chr2 23795718 23795861 -226891993 - FLAM_C SINE Alu -4 139 1 597 141 0 0 chr2 23795865 23795964 -226891890 + L1M4 LINE L1 4103 4201 -1945 1206 180 18 40 chr2 23795964 23796186 -226891668 + AluJo SINE Alu 1 217 -95 2192 169 57 132 chr2 23796224 23796465 -226891389 + L1M4 LINE L1 4258 4516 -1630 2067 136 48 3 chr2 23796465 23796795 -226891059 - MER7A DNA MER2_type -2 344 2 2192 169 57 132 chr2 23796795 23796885 -226890969 + L1M4 LINE L1 4516 4611 -1535 2343 102 0 0 chr2 23796885 23797178 -226890676 + AluSp SINE Alu 1 293 -20 2192 169 57 132 chr2 23797178 23797565 -226890289 + L1M4 LINE L1 4611 4923 -1223 422 174 0 23 chr2 23797798 23797884 -226889970 - MER92B LTR ERV1 -7 629 546 279 186 51 0 chr2 23797888 23797947 -226889907 - MER92B LTR ERV1 -50 586 525 * 1605 198 46 85 chr2 23797943 23798529 -226889325 - MER92B LTR ERV1 -4 632 70 1985 54 8 0 chr2 23798529 23798770 -226889084 + AluSq SINE Alu 1 243 -70 21 36 0 0 chr2 23799135 23799163 -226888691 + AT_rich Low_complexity Low_complexity 1 28 0 205 309 203 8 chr2 23799185 23799308 -226888546 - L2 LINE L2 -5 3267 3121 2088 117 0 23 chr2 23799311 23799620 -226888234 + AluSx SINE Alu 1 302 -10 187 298 110 53 chr2 23799712 23799940 -226887914 - L2 LINE L2 -216 3056 2816 2285 97 17 0 chr2 23799940 23800239 -226887615 - AluSx SINE Alu -8 304 1 2172 91 28 3 chr2 23800488 23800775 -226887079 - AluSg SINE Alu -16 294 1 357 277 208 0 chr2 23800779 23800909 -226886945 - L2 LINE L2 -604 2710 2554 2056 137 3 13 chr2 23801012 23801311 -226886543 - AluSp SINE Alu -17 296 1 25 0 0 0 chr2 23803300 23803325 -226884529 + AT_rich Low_complexity Low_complexity 1 25 0 2031 146 0 19 chr2 23803336 23803652 -226884202 - AluSx SINE Alu -2 310 1 222 37 0 0 chr2 23803664 23803691 -226884163 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1969 131 7 14 chr2 23803693 23803841 -226884013 - AluSx SINE Alu -31 281 134 2080 110 33 10 chr2 23803841 23804141 -226883713 - AluSc SINE Alu -2 307 1 1969 131 7 14 chr2 23804141 23804275 -226883579 - AluSx SINE Alu -178 134 1 1718 193 7 3 chr2 23804408 23804709 -226883145 - AluJo SINE Alu -10 302 1 2251 104 0 10 chr2 23805367 23805675 -226882179 - AluSq SINE Alu -8 305 1 2410 84 3 0 chr2 23805763 23806059 -226881795 - AluSq SINE Alu -2 311 15 379 296 64 0 chr2 23806149 23806274 -226881580 - MIR SINE MIR -74 188 56 2048 108 13 67 chr2 23806466 23806782 -226881072 - AluSx SINE Alu -13 299 1 1850 122 84 3 chr2 23806811 23807098 -226880756 + AluY SINE Alu 2 311 0 2198 125 0 0 chr2 23807113 23807408 -226880446 + AluSx SINE Alu 1 295 -17 496 187 0 0 chr2 23807408 23807499 -226880355 - L1PB4 LINE L1 -5 6151 6061 181 0 0 65 chr2 23807798 23807829 -226880025 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 2004 122 3 3 chr2 23807836 23808123 -226879731 - AluSx SINE Alu -25 287 1 1809 121 92 0 chr2 23808125 23808398 -226879456 - AluSx SINE Alu -14 298 1 941 171 52 5 chr2 23808408 23808601 -226879253 - L1MA6 LINE L1 -5 6295 6094 431 217 9 43 chr2 23808661 23808776 -226879078 + L2 LINE L2 3186 3296 -17 459 0 0 0 chr2 23808833 23808884 -226878970 + (TA)n Simple_repeat Simple_repeat 1 51 0 1993 138 7 0 chr2 23808885 23809175 -226878679 - AluSq SINE Alu -16 297 6 2407 104 0 0 chr2 23809378 23809686 -226878168 - AluSx SINE Alu -4 308 1 1744 167 7 27 chr2 23809692 23809854 -226878000 - AluJo SINE Alu -19 293 138 2158 130 3 3 chr2 23809854 23810162 -226877692 - AluSg SINE Alu -2 308 1 1744 167 7 27 chr2 23810162 23810298 -226877556 - AluJo SINE Alu -174 138 1 2148 217 68 48 chr2 23810678 23811429 -226876425 - L1MC5 LINE L1 -37 7924 7159 1117 90 0 0 chr2 23811429 23811573 -226876281 - AluSp/q SINE Alu -10 303 160 1598 174 16 13 chr2 23811573 23811890 -226875964 - L1MB4 LINE L1 -158 6022 5705 1540 148 4 29 chr2 23811891 23812169 -226875685 - L1MB4 LINE L1 -592 5588 5318 1023 144 6 24 chr2 23812176 23812343 -226875511 - AluJb SINE Alu -13 299 136 2389 94 0 0 chr2 23812351 23812650 -226875204 - AluSc SINE Alu -10 299 1 394 286 12 25 chr2 23812676 23812837 -226875017 - L1M4 LINE L1 -6383 159 1 2100 169 9 0 chr2 23812918 23813262 -226874592 - MER7A DNA MER2_type -1 345 1 1681 170 4 0 chr2 23813324 23813583 -226874271 - AluSx SINE Alu -52 260 1 23 0 0 0 chr2 23813588 23813611 -226874243 + AT_rich Low_complexity Low_complexity 1 23 0 1117 216 57 63 chr2 23813617 23813756 -226874098 - L1MC4 LINE L1 -979 7063 6925 2098 117 6 19 chr2 23813756 23814072 -226873782 - AluSx SINE Alu 0 312 1 1117 216 57 63 chr2 23814072 23814283 -226873571 - L1MC4 LINE L1 -1117 6925 6715 1098 209 137 14 chr2 23814303 23814581 -226873273 + MER2 DNA MER2_type 6 317 -28 682 199 0 57 chr2 23814587 23814728 -226873126 - AluJo/FRAM SINE Alu -46 266 134 1770 133 0 4 chr2 23814729 23814970 -226872884 - AluSx SINE Alu -19 293 54 2215 92 3 0 chr2 23814972 23815255 -226872599 + AluSp SINE Alu 1 284 -29 21 0 0 0 chr2 23815262 23815283 -226872571 + AT_rich Low_complexity Low_complexity 1 21 0 840 220 62 0 chr2 23815283 23815460 -226872394 - AluJo SINE Alu -113 199 12 23 33 0 0 chr2 23815966 23815996 -226871858 + AT_rich Low_complexity Low_complexity 1 30 0 511 251 36 18 chr2 23816084 23816251 -226871603 + MIR SINE MIR 10 179 -83 1446 210 48 7 chr2 23816257 23816552 -226871302 - AluJo SINE Alu -5 307 1 2301 109 0 10 chr2 23816629 23816942 -226870912 + AluSx SINE Alu 1 310 -2 2587 179 88 37 chr2 23816950 23817390 -226870464 - MER68 LTR ERV1 0 562 89 2543 62 0 13 chr2 23817390 23817698 -226870156 + AluY SINE Alu 1 304 -7 2587 179 88 37 chr2 23817698 23817792 -226870062 - MER68 LTR ERV1 -473 89 1 749 200 0 7 chr2 23817852 23818002 -226869852 - L1MB8 LINE L1 -6 6172 6024 1757 158 3 10 chr2 23818159 23818450 -226869404 - AluSx SINE Alu -23 289 1 848 101 0 54 chr2 23818453 23818601 -226869253 - L1MB8 LINE L1 -211 5967 5828 2431 98 0 0 chr2 23818612 23818918 -226868936 - AluSq SINE Alu -7 306 1 2413 98 0 0 chr2 23819062 23819368 -226868486 - AluSc SINE Alu -3 306 1 2399 90 0 3 chr2 23819368 23819668 -226868186 - AluSx SINE Alu -13 299 1 549 156 24 102 chr2 23819891 23820037 -226867817 + L1MB1 LINE L1 5172 5305 -841 2214 97 45 87 chr2 23820037 23820117 -226867737 - THE1B LTR MaLR 0 364 282 2320 89 3 16 chr2 23820117 23820431 -226867423 - AluSp SINE Alu -2 311 2 2214 97 45 87 chr2 23820431 23820730 -226867124 - THE1B LTR MaLR -82 282 1 549 156 24 102 chr2 23820730 23820750 -226867104 + L1MB1 LINE L1 5305 5325 -821 1544 90 0 0 chr2 23820758 23820947 -226866907 + AluSg SINE Alu 2 190 -120 401 125 0 50 chr2 23820947 23821027 -226866827 + AluSg SINE Alu 236 311 -1 1739 127 71 56 chr2 23821029 23821369 -226866485 + L1MB1 LINE L1 5335 5679 -655 1680 178 3 23 chr2 23821369 23821673 -226866181 + AluJo SINE Alu 1 298 -14 1277 150 0 31 chr2 23821684 23821739 -226866115 + L1MB1 LINE L1 5758 5813 -355 2359 89 3 0 chr2 23821739 23822032 -226865822 - AluSp SINE Alu -19 294 1 1277 150 0 31 chr2 23822032 23822296 -226865558 + L1MB1 LINE L1 5813 6167 -1 738 200 15 0 chr2 23822385 23822520 -226865334 + AluJb SINE Alu 2 138 -174 1173 133 0 17 chr2 23822530 23822703 -226865151 - AluJo SINE Alu -142 170 1 3145 249 19 8 chr2 23822703 23823551 -226864303 - L1M4 LINE L1 -1959 4187 3331 2316 92 7 0 chr2 23823662 23823957 -226863897 - AluSc SINE Alu -12 297 1 2657 52 3 0 chr2 23823966 23824273 -226863581 - AluY SINE Alu -3 308 1 1662 157 63 20 chr2 23824281 23824580 -226863274 - AluJb SINE Alu 0 312 1 238 103 0 69 chr2 23824614 23824672 -226863182 + (CTACT)n Simple_repeat Simple_repeat 4 57 0 198 130 0 130 chr2 23824725 23824771 -226863083 + L2 LINE L2 3267 3306 -7 411 301 128 9 chr2 23824981 23825207 -226862647 - MIR SINE MIR -8 254 2 682 158 127 70 chr2 23825453 23825611 -226862243 - FAM SINE Alu -4 171 5 803 219 98 5 chr2 23825638 23825843 -226862011 + MIR SINE MIR 1 224 -38 2323 81 10 3 chr2 23825918 23826213 -226861641 + AluY SINE Alu 2 298 -13 2496 91 0 0 chr2 23826405 23826714 -226861140 - AluSc SINE Alu 0 309 1 1348 181 35 86 chr2 23826778 23826916 -226860938 + AluJo SINE Alu 1 144 -168 2045 119 0 0 chr2 23826916 23827184 -226860670 - AluSc SINE Alu -41 268 1 1348 181 35 86 chr2 23827184 23827360 -226860494 + AluJo SINE Alu 144 299 -13 1660 182 26 13 chr2 23827533 23827835 -226860019 + AluJb SINE Alu 1 306 -6 813 178 8 130 chr2 23827859 23828025 -226859829 + MER20 DNA MER1_type 1 129 -90 3377 116 44 31 chr2 23828025 23828543 -226859311 - MER1A DNA MER1_type 0 527 3 813 178 8 130 chr2 23828543 23828623 -226859231 + MER20 DNA MER1_type 129 217 -2 295 197 66 123 chr2 23828992 23829022 -226858832 + Charlie1a DNA MER1_type 49 79 -2682 1728 156 4 7 chr2 23829022 23829298 -226858556 - AluJo SINE Alu -22 290 16 295 197 66 123 chr2 23829298 23829357 -226858497 + Charlie1a DNA MER1_type 79 132 -2629 1828 138 4 4 chr2 23829357 23829618 -226858236 + AluJo SINE Alu 18 278 -34 295 197 66 123 chr2 23829618 23829649 -226858205 + Charlie1a DNA MER1_type 132 163 -1292 1767 186 65 71 chr2 23829650 23829757 -226858097 + Charlie1a DNA MER1_type 112 218 -2543 970 178 113 14 chr2 23829757 23829970 -226857884 + MER46A DNA MER2_type 3 236 0 1767 186 65 71 chr2 23829970 23830065 -226857789 + Charlie1a DNA MER1_type 218 312 -2449 2383 88 0 0 chr2 23830065 23830361 -226857493 + AluSg SINE Alu 1 296 -14 1767 186 65 71 chr2 23830361 23830571 -226857283 + Charlie1a DNA MER1_type 312 522 -2239 2070 104 4 4 chr2 23830571 23830841 -226857013 - AluSg SINE Alu -40 270 1 2427 90 0 6 chr2 23830850 23831162 -226856692 - AluY SINE Alu -1 310 1 2250 97 10 0 chr2 23831162 23831452 -226856402 - AluSg SINE Alu -17 293 1 1767 186 65 71 chr2 23831452 23831521 -226856333 + Charlie1a DNA MER1_type 528 603 -852 923 75 8 8 chr2 23831621 23831741 -226856113 - AluY SINE Alu -191 120 1 2365 67 0 20 chr2 23831770 23832070 -226855784 - AluY SINE Alu -17 294 1 1788 219 45 36 chr2 23832080 23832120 -226855734 + Charlie1a DNA MER1_type 630 668 -2093 2038 152 7 3 chr2 23832120 23832429 -226855425 + AluSx SINE Alu 1 310 -2 1788 219 45 36 chr2 23832429 23832941 -226854913 + Charlie1a DNA MER1_type 668 1187 -268 763 264 57 24 chr2 23833011 23833061 -226854793 - HAL1 LINE L1 -56 2451 2404 2059 118 45 0 chr2 23833061 23833350 -226854504 - AluSp SINE Alu -11 302 1 763 264 57 24 chr2 23833350 23833633 -226854221 - HAL1 LINE L1 -103 2404 2107 2231 84 99 0 chr2 23833846 23834169 -226853685 - THE1A LTR MaLR 0 355 1 875 137 8 0 chr2 23834173 23834304 -226853550 - FLAM_C SINE Alu -11 132 1 1132 188 144 0 chr2 23834506 23834762 -226853092 + AluJo SINE Alu 2 294 -8 2175 112 7 7 chr2 23834786 23835089 -226852765 + AluSp SINE Alu 5 307 -6 1941 151 14 0 chr2 23835260 23835551 -226852303 - AluSx SINE Alu -17 295 1 368 120 0 0 chr2 23835717 23835767 -226852087 + MER57A LTR ERV1 295 344 -59 2457 67 0 32 chr2 23835786 23836101 -226851753 + AluY SINE Alu 2 306 -5 2144 116 0 3 chr2 23836105 23836399 -226851455 + AluSg SINE Alu 1 293 -17 2226 101 7 7 chr2 23836486 23836782 -226851072 + AluSx SINE Alu 1 296 -16 286 289 0 30 chr2 23836784 23836919 -226850935 - L1ME4a LINE L1 -80 6041 5911 1603 178 0 8 chr2 23837035 23837294 -226850560 - AluJo SINE Alu -55 257 1 683 171 48 115 chr2 23837357 23837609 -226850245 - L1MB7 LINE L1 -5 6179 5945 2400 152 38 22 chr2 23837639 23838037 -226849817 - L1ME4a LINE L1 -448 5736 5322 2100 121 4 0 chr2 23838037 23838350 -226849504 - AluSx SINE Alu 0 314 1 2400 152 38 22 chr2 23838350 23838479 -226849375 - L1ME4a LINE L1 -862 5322 5197 1663 171 19 47 chr2 23838610 23838931 -226848923 + AluJo SINE Alu 1 312 0 2130 111 21 0 chr2 23839035 23839323 -226848531 + AluJb SINE Alu 1 294 -18 1178 95 24 86 chr2 23839341 23839503 -226848351 + MER30 DNA MER1_type 1 149 -81 2425 63 0 27 chr2 23839503 23839804 -226848050 + AluY SINE Alu 3 295 -16 1178 95 24 86 chr2 23839804 23839851 -226848003 + MER30 DNA MER1_type 149 197 -33 808 132 66 0 chr2 23839941 23840062 -226847792 + FLAM_C SINE Alu 5 133 -10 2349 74 0 3 chr2 23840647 23840944 -226846910 + AluSp SINE Alu 1 296 -17 2161 114 0 0 chr2 23841101 23841399 -226846455 - AluSx SINE Alu -14 298 1 28 48 0 0 chr2 23842012 23842054 -226845800 + AT_rich Low_complexity Low_complexity 1 42 0 1454 170 3 113 chr2 23842332 23842661 -226845193 - AluJo SINE Alu -9 293 1 2039 117 0 10 chr2 23842666 23842975 -226844879 - AluSx SINE Alu -6 306 1 463 97 0 0 chr2 23843026 23843088 -226844766 - Alu SINE Alu -15 297 236 1500 172 46 14 chr2 23843137 23843422 -226844432 + AluJb SINE Alu 1 294 -18 2326 52 0 7 chr2 23843450 23843767 -226844087 + AluY SINE Alu 1 315 0 23 54 0 0 chr2 23843837 23843874 -226843980 + AT_rich Low_complexity Low_complexity 1 37 0 301 194 78 10 chr2 23843922 23844025 -226843829 - L1ME4a LINE L1 -48 6073 5964 2229 92 10 0 chr2 23844037 23844331 -226843523 - AluSx SINE Alu -15 297 1 851 162 0 103 chr2 23844348 23844533 -226843321 + AluJb SINE Alu 134 299 -13 24 32 0 0 chr2 23844582 23844613 -226843241 + AT_rich Low_complexity Low_complexity 1 31 0 2378 72 0 0 chr2 23844920 23845224 -226842630 + AluY SINE Alu 1 304 -7 2104 129 0 3 chr2 23845265 23845574 -226842280 + AluSg SINE Alu 1 308 -2 1773 242 121 4 chr2 23845575 23846138 -226841716 - L1MC4 LINE L1 -142 7900 7272 180 0 0 0 chr2 23846168 23846188 -226841666 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 1069 278 125 3 chr2 23846201 23846546 -226841308 - L1MC4 LINE L1 -985 7057 6671 551 93 52 10 chr2 23846557 23846654 -226841200 + L1 LINE L1 3589 3689 -2457 186 43 0 0 chr2 23846670 23846693 -226841161 + (TG)n Simple_repeat Simple_repeat 2 24 0 712 139 0 6 chr2 23846722 23846962 -226840892 - AluJb SINE Alu -7 305 15 266 132 0 8 chr2 23847063 23847248 -226840606 - AluJb SINE Alu -66 236 1 489 257 29 40 chr2 23847255 23847316 -226840538 - L1MC4 LINE L1 -1414 6628 6568 1825 155 0 7 chr2 23847316 23847606 -226840248 + AluJb SINE Alu 1 288 -24 489 257 29 40 chr2 23847606 23847720 -226840134 - L1MC4 LINE L1 -1474 6568 6443 2076 105 0 23 chr2 23848180 23848484 -226839370 + AluSx SINE Alu 1 297 -15 394 216 108 0 chr2 23848491 23848602 -226839252 + L1ME3A LINE L1 5827 5949 -221 478 266 35 6 chr2 23848820 23848989 -226838865 - L1MCa LINE L1 -3558 2868 2695 316 179 107 24 chr2 23848991 23849075 -226838779 - MER34C LTR ERV1 0 585 495 28 0 0 26 chr2 23849083 23849102 -226838752 + AT_rich Low_complexity Low_complexity 1 19 -19 237 65 0 0 chr2 23849102 23849133 -226838721 + (CA)n Simple_repeat Simple_repeat 2 32 0 28 0 0 26 chr2 23849133 23849152 -226838702 + AT_rich Low_complexity Low_complexity 19 38 0 1995 124 3 13 chr2 23849152 23849467 -226838387 - AluSx SINE Alu 0 312 1 184 29 29 29 chr2 23849469 23849503 -226838351 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1417 103 9 60 chr2 23849503 23849663 -226838191 - AluSg/x SINE Alu -27 285 139 2322 80 0 0 chr2 23849663 23849965 -226837889 - AluSc SINE Alu -7 302 1 1417 103 9 60 chr2 23849965 23850037 -226837817 - AluSg/x SINE Alu -173 139 65 818 204 38 80 chr2 23850037 23850301 -226837553 - MER39 LTR ERV1 -188 519 267 240 238 37 32 chr2 23850277 23850379 -226837475 - MER39 LTR ERV1 -538 106 6 * 636 239 32 40 chr2 23850384 23850631 -226837223 - L1MCa LINE L1 -3730 2696 2452 22 0 0 0 chr2 23851100 23851122 -226836732 + AT_rich Low_complexity Low_complexity 1 22 0 238 139 0 0 chr2 23851142 23851178 -226836676 - Alu SINE Alu -266 36 1 1945 120 16 13 chr2 23851370 23851679 -226836175 - AluSg SINE Alu 0 310 1 431 267 120 45 chr2 23851702 23852330 -226835524 - L1MCa LINE L1 -4564 1862 1129 238 210 16 32 chr2 23852951 23853013 -226834841 - L1MCa LINE L1 -5855 561 501 343 150 100 25 chr2 23853072 23853134 -226834720 - Tigger5 DNA MER2_type -1 2322 2251 2229 57 0 7 chr2 23853134 23853416 -226834438 + AluY SINE Alu 30 309 -2 343 150 100 25 chr2 23853416 23853433 -226834421 - Tigger5 DNA MER2_type -72 2251 2237 23 33 0 0 chr2 23853579 23853609 -226834245 + AT_rich Low_complexity Low_complexity 1 30 0 1098 139 0 17 chr2 23853722 23853902 -226833952 - AluSg/x SINE Alu -2 308 132 2108 116 3 3 chr2 23853902 23854203 -226833651 - AluSx SINE Alu -11 301 1 2334 91 7 0 chr2 23854300 23854609 -226833245 - AluSq SINE Alu 0 313 3 1727 142 35 10 chr2 23854611 23854921 -226832933 - 7SLRNA srpRNA srpRNA -1 319 2 801 158 0 0 chr2 23854926 23855046 -226832808 - FLAM_C SINE Alu -11 132 13 305 267 46 53 chr2 23855046 23855177 -226832677 - L1M4 LINE L1 -2879 3267 3138 2117 79 14 4 chr2 23855275 23855582 -226832272 - AluSc SINE Alu 0 310 1 2208 110 3 0 chr2 23855647 23855948 -226831906 - AluSq SINE Alu -11 302 1 343 276 151 5 chr2 23856077 23856269 -226831585 - L2 LINE L2 -5 3308 3089 2032 114 3 7 chr2 23856274 23856573 -226831281 + AluSx SINE Alu 1 298 -14 640 194 16 23 chr2 23856573 23856702 -226831152 - AluSg/x SINE Alu -19 293 166 502 194 83 0 chr2 23856962 23857070 -226830784 + HsTC2 DNA Tc2 2 118 -1780 657 199 107 0 chr2 23857276 23857407 -226830447 + FRAM SINE Alu 2 146 -30 1910 129 0 0 chr2 23858098 23858411 -226829443 + AluSc SINE Alu 1 313 0 725 175 0 8 chr2 23858419 23858539 -226829315 + FLAM_C SINE Alu 2 120 -23 26 30 0 0 chr2 23858539 23858572 -226829282 + AT_rich Low_complexity Low_complexity 1 33 0 2119 111 7 0 chr2 23858820 23859126 -226828728 - AluSp SINE Alu -5 308 1 48 0 0 0 chr2 23859465 23859513 -226828341 + AT_rich Low_complexity Low_complexity 1 48 0 2024 96 7 10 chr2 23859514 23859806 -226828048 + AluSc SINE Alu 1 291 -18 866 134 15 0 chr2 23859829 23859963 -226827891 + AluJb SINE Alu 1 136 -176 1884 136 0 0 chr2 23859963 23860235 -226827619 + AluSx SINE Alu 7 278 -34 1999 110 10 0 chr2 23860251 23860543 -226827311 - AluSq SINE Alu -18 295 1 1201 198 87 7 chr2 23860543 23860831 -226827023 - Charlie1b DNA MER1_type -208 315 5 375 269 85 21 chr2 23860854 23860995 -226826859 - MER5B DNA MER1_type 0 178 29 180 0 0 0 chr2 23861558 23861578 -226826276 + (A)n Simple_repeat Simple_repeat 1 20 0 2250 90 0 3 chr2 23862207 23862507 -226825347 + AluSc SINE Alu 1 299 -10 1008 162 131 22 chr2 23863225 23863447 -226824407 + 7SLRNA srpRNA srpRNA 11 256 -64 2228 110 0 0 chr2 23863469 23863778 -226824076 + AluSg SINE Alu 1 309 -1 2310 87 0 3 chr2 23864040 23864340 -226823514 - AluSq SINE Alu -14 299 1 679 203 0 8 chr2 23864496 23864629 -226823225 + FLAM_C SINE Alu 2 133 0 908 240 110 16 chr2 23864832 23865078 -226822776 - MLT1J LTR MaLR 0 511 243 3702 160 113 57 chr2 23865091 23865165 -226822689 - L1MB8 LINE L1 -1 6177 6109 1954 90 42 3 chr2 23865165 23865453 -226822401 + AluSx SINE Alu 9 307 -5 3702 160 113 57 chr2 23865453 23866443 -226821411 - L1MB8 LINE L1 -69 6109 5043 1188 102 0 0 chr2 23866455 23866621 -226821233 - AluSg/x SINE Alu -8 304 139 3862 155 45 31 chr2 23866692 23867410 -226820444 - MER50 LTR ERV1 0 734 7 344 215 41 50 chr2 23867412 23867533 -226820321 - MLT1J LTR MaLR -286 225 106 848 161 7 7 chr2 23868828 23868977 -226818877 - MER5A DNA MER1_type -27 162 14 2396 81 0 0 chr2 23869036 23869345 -226818509 + AluSx SINE Alu 1 309 -3 824 161 67 0 chr2 23870333 23870482 -226817372 - AluJo SINE Alu -33 279 121 21 0 0 0 chr2 23870482 23870503 -226817351 + AT_rich Low_complexity Low_complexity 1 21 0 653 135 31 0 chr2 23870510 23870606 -226817248 - U6 snRNA snRNA -5 102 4 787 181 0 21 chr2 23870606 23870750 -226817104 - AluJo SINE Alu -168 144 4 325 98 0 33 chr2 23870751 23870812 -226817042 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 2224 96 3 0 chr2 23870823 23871124 -226816730 - AluSx SINE Alu -10 302 1 292 336 52 0 chr2 23871171 23871305 -226816549 + L2 LINE L2 2431 2571 -743 216 0 0 0 chr2 23871602 23871626 -226816228 + (T)n Simple_repeat Simple_repeat 1 24 0 1861 114 11 0 chr2 23871885 23872149 -226815705 + AluSx SINE Alu 9 275 -37 302 327 30 35 chr2 23872674 23872873 -226814981 - L2 LINE L2 -1334 1980 1783 1543 169 19 50 chr2 23875241 23875561 -226812293 - AluJb SINE Alu -2 310 1 2013 128 3 6 chr2 23875571 23875883 -226811971 - AluSx SINE Alu -1 311 1 375 252 43 142 chr2 23875912 23876214 -226811640 - L1MC4a LINE L1 -1756 6052 5781 1210 65 126 75 chr2 23876216 23876267 -226811587 + MER30 DNA MER1_type 6 53 -177 2193 89 0 38 chr2 23876267 23876409 -226811445 + AluSx SINE Alu 1 147 -165 2139 106 3 7 chr2 23876409 23876712 -226811142 + AluSg SINE Alu 1 302 -8 2193 89 0 38 chr2 23876712 23876885 -226810969 + AluSx SINE Alu 147 304 -8 1210 65 126 75 chr2 23876885 23877047 -226810807 + MER30 DNA MER1_type 53 230 0 242 291 36 45 chr2 23877048 23877158 -226810696 - L1MC4a LINE L1 -372 5798 5690 476 266 25 14 chr2 23877726 23877891 -226809963 + MIR SINE MIR 33 198 -64 354 283 114 33 chr2 23877892 23878076 -226809778 + L2 LINE L2 2278 2476 -838 876 262 97 83 chr2 23878077 23878183 -226809671 + L2 LINE L2 2597 2700 -572 1677 139 12 0 chr2 23878183 23878442 -226809412 + AluSx SINE Alu 7 268 -44 180 0 0 0 chr2 23878450 23878470 -226809384 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 876 262 97 83 chr2 23878470 23878540 -226809314 + L2 LINE L2 2706 2774 -498 261 0 0 0 chr2 23878540 23878569 -226809285 + (TG)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr2 23878569 23878592 -226809262 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 876 262 97 83 chr2 23878592 23879056 -226808798 + L2 LINE L2 2773 3272 0 828 270 83 12 chr2 23880036 23880277 -226807577 - MER45C DNA AcHobo -680 273 16 1720 149 0 24 chr2 23880431 23880720 -226807134 - AluJb SINE Alu -30 282 1 2130 115 0 6 chr2 23880737 23881051 -226806803 - AluSx SINE Alu 0 312 1 288 252 143 25 chr2 23881114 23881233 -226806621 + L2 LINE L2 3137 3269 -3 427 299 113 31 chr2 23884224 23884676 -226803178 + L2 LINE L2 1988 2476 -838 302 351 18 0 chr2 23884761 23884875 -226802979 + L2 LINE L2 3136 3251 -21 1625 51 69 5 chr2 23885645 23885862 -226801992 - AluY SINE Alu -80 231 1 556 170 11 0 chr2 23885862 23885956 -226801898 - FLAM_A SINE Alu -47 95 1 2247 233 91 69 chr2 23886132 23886926 -226800928 + MER21B LTR ERV1 1 811 -52 710 269 41 62 chr2 23886953 23887007 -226800847 + L1M4 LINE L1 3459 3513 -2633 2349 62 0 0 chr2 23887007 23887328 -226800526 + AluY SINE Alu 1 321 0 710 269 41 62 chr2 23887328 23887514 -226800340 + L1M4 LINE L1 3513 3701 -2445 1711 160 3 10 chr2 23887514 23887814 -226800040 + AluJo SINE Alu 1 298 -14 710 269 41 62 chr2 23887814 23887963 -226799891 + L1M4 LINE L1 3701 3843 -2303 2053 105 10 0 chr2 23887963 23888259 -226799595 + AluSg SINE Alu 1 299 -11 710 269 41 62 chr2 23888259 23888282 -226799572 + L1M4 LINE L1 3843 3865 -2281 2036 112 3 0 chr2 23888344 23888653 -226799201 + AluSx SINE Alu 1 310 0 666 110 0 0 chr2 23888806 23888897 -226798957 + AluSg/x SINE Alu 70 160 -150 2330 75 0 7 chr2 23891398 23891704 -226796150 + AluSc SINE Alu 1 304 -5 325 269 104 30 chr2 23891809 23891943 -226795911 + L2 LINE L2 3160 3303 -10 1426 180 0 53 chr2 23891943 23892088 -226795766 + AluJo SINE Alu 1 124 -188 1661 118 59 7 chr2 23892088 23892383 -226795471 + AluSx SINE Alu 1 309 0 1426 180 0 53 chr2 23892383 23892536 -226795318 + AluJo SINE Alu 124 284 -28 1615 189 3 0 chr2 23893313 23893610 -226794244 + AluSx SINE Alu 1 298 -14 570 168 0 10 chr2 23893656 23893757 -226794097 + FLAM_C SINE Alu 33 132 -11 1908 81 4 0 chr2 23893992 23894239 -226793615 + AluSx SINE Alu 1 248 -64 1787 156 0 7 chr2 23894420 23894721 -226793133 - AluJb SINE Alu -13 299 1 24 32 0 0 chr2 23894744 23894775 -226793079 + AT_rich Low_complexity Low_complexity 1 31 0 36 40 0 0 chr2 23894823 23894873 -226792981 + AT_rich Low_complexity Low_complexity 1 50 0 357 218 115 109 chr2 23894884 23895049 -226792805 + L1ME4a LINE L1 5956 6121 0 550 257 128 16 chr2 23895049 23895298 -226792556 + L1MC4a LINE L1 5796 6072 -1736 29 0 0 0 chr2 23895441 23895470 -226792384 + AT_rich Low_complexity Low_complexity 1 29 0 815 136 0 23 chr2 23895479 23895611 -226792243 + FLAM_C SINE Alu 1 129 -14 24 0 0 0 chr2 23895611 23895635 -226792219 + AT_rich Low_complexity Low_complexity 1 24 0 1976 108 14 0 chr2 23895635 23895955 -226791899 + AluSc SINE Alu 1 324 0 1142 184 0 5 chr2 23896070 23896271 -226791583 + AluJo SINE Alu 1 200 -112 533 295 46 50 chr2 23896278 23896559 -226791295 + L1ME LINE L1 5496 5775 -346 1990 120 17 0 chr2 23896877 23897168 -226790686 - AluSx SINE Alu -15 297 2 832 258 79 47 chr2 23899385 23899641 -226788213 + L1MC4 LINE L1 7492 7738 -304 2198 101 0 10 chr2 23899641 23899947 -226787907 - AluSq SINE Alu -10 303 1 832 258 79 47 chr2 23899947 23900224 -226787630 + L1MC4 LINE L1 7738 8042 0 2017 142 3 0 chr2 23900581 23900892 -226786962 + AluSp SINE Alu 1 312 -1 2183 110 0 3 chr2 23900903 23901202 -226786652 + AluSx SINE Alu 1 298 -14 2155 73 0 17 chr2 23901441 23901729 -226786125 + AluSq SINE Alu 24 306 -7 2164 94 0 13 chr2 23901969 23902103 -226785751 + AluSp SINE Alu 3 137 -176 2475 53 3 0 chr2 23902103 23902407 -226785447 + AluY SINE Alu 1 305 -6 2164 94 0 13 chr2 23902407 23902570 -226785284 + AluSp SINE Alu 137 296 -17 2306 77 3 3 chr2 23902598 23902898 -226784956 + AluSp SINE Alu 1 300 -13 1893 139 0 7 chr2 23902901 23903203 -226784651 + AluSx SINE Alu 3 302 -10 755 142 0 71 chr2 23903211 23903352 -226784502 + FLAM_C SINE Alu 1 131 -2 247 301 84 0 chr2 23903839 23903982 -226783872 - L1ME LINE L1 -207 5914 5760 183 162 0 0 chr2 23905160 23905197 -226782657 + T-rich Low_complexity Low_complexity 1 37 0 2134 77 3 7 chr2 23905211 23905497 -226782357 + AluSx SINE Alu 18 302 -10 795 124 0 0 chr2 23905507 23905612 -226782242 - FLAM_C SINE Alu -26 117 13 1286 102 0 66 chr2 23906171 23906397 -226781457 + AluJo SINE Alu 94 304 -8 209 178 0 82 chr2 23906638 23906711 -226781143 + (CCCCG)n Simple_repeat Simple_repeat 5 71 0 2293 85 0 0 chr2 23908068 23908361 -226779493 + AluSg SINE Alu 9 301 -9 270 195 273 0 chr2 23908556 23908633 -226779221 - L2 LINE L2 -3 3310 3213 417 323 37 12 chr2 23908649 23908813 -226779041 + L2 LINE L2 2924 3091 -181 1289 252 213 32 chr2 23908847 23909691 -226778163 + L2 LINE L2 2174 3213 -100 1431 183 13 40 chr2 23909691 23909992 -226777862 + AluJb SINE Alu 1 293 -19 1289 252 213 32 chr2 23909992 23910100 -226777754 + L2 LINE L2 3213 3300 -13 198 0 0 0 chr2 23910101 23910123 -226777731 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 1639 162 0 55 chr2 23910126 23910435 -226777419 - AluJo SINE Alu -20 292 1 261 271 14 0 chr2 23910557 23910627 -226777227 + L2 LINE L2 3200 3270 -2 188 241 121 60 chr2 23910716 23910799 -226777055 - MIR SINE MIR -78 130 43 2630 225 69 60 chr2 23912002 23912201 -226775653 - L1ME3A LINE L1 -14 6156 5960 1722 137 22 26 chr2 23912201 23912514 -226775340 - AluJb SINE Alu 0 312 1 2630 225 69 60 chr2 23912514 23912988 -226774866 - L1ME3A LINE L1 -210 5960 5492 2159 107 16 0 chr2 23912988 23913296 -226774558 - AluSq SINE Alu 0 313 1 2630 225 69 60 chr2 23913296 23913349 -226774505 - L1ME3A LINE L1 -678 5492 5441 1612 96 5 0 chr2 23913349 23913568 -226774286 - AluSg/x SINE Alu -10 302 83 2630 225 69 60 chr2 23913568 23913695 -226774159 - L1ME3A LINE L1 -729 5441 5317 2096 126 0 0 chr2 23913695 23913997 -226773857 - AluSq SINE Alu -11 302 1 2630 225 69 60 chr2 23913997 23914178 -226773676 - L1ME3A LINE L1 -853 5317 5114 995 253 30 50 chr2 23914146 23914185 -226773669 - L1M4 LINE L1 -933 5213 5175 * 1637 152 0 70 chr2 23914185 23914369 -226773485 - AluJo SINE Alu -6 306 153 2182 100 3 0 chr2 23914369 23914679 -226773175 - AluSp SINE Alu -2 311 1 1637 152 0 70 chr2 23914679 23914823 -226773031 - AluJo SINE Alu -159 153 1 995 253 30 50 chr2 23914823 23914921 -226772933 - L1M4 LINE L1 -971 5175 5077 2236 92 0 13 chr2 23914921 23915226 -226772628 + AluSx SINE Alu 1 301 -11 995 253 30 50 chr2 23915226 23915487 -226772367 - L1M4 LINE L1 -1069 5077 4822 311 311 0 0 chr2 23915610 23915700 -226772154 + (TG)n Simple_repeat Simple_repeat 2 91 0 399 293 26 0 chr2 23916025 23916141 -226771713 - MIR3 SINE MIR -50 158 40 2178 101 3 7 chr2 23916618 23916925 -226770929 + AluSx SINE Alu 1 306 -6 744 288 161 32 chr2 23916974 23917275 -226770579 - L2 LINE L2 -453 2861 2600 1944 146 0 3 chr2 23917275 23917598 -226770256 + AluSx SINE Alu 1 312 0 744 288 161 32 chr2 23917598 23917769 -226770085 - L2 LINE L2 -714 2600 2328 1795 140 44 0 chr2 23918189 23918482 -226769372 + AluSx SINE Alu 1 306 -6 519 184 72 121 chr2 23918569 23918776 -226769078 - L1MC4a LINE L1 -6 7802 7606 1954 89 41 7 chr2 23918874 23919165 -226768689 - AluY SINE Alu -10 301 1 2185 101 0 19 chr2 23919167 23919483 -226768371 - AluSx SINE Alu 0 312 3 839 141 0 15 chr2 23919485 23919620 -226768234 - AluSq/x SINE Alu -179 133 1 192 250 93 83 chr2 23920802 23920852 -226767002 - MIR SINE MIR -1 261 213 1464 120 127 15 chr2 23920852 23921133 -226766721 - AluSg1 SINE Alu 0 309 1 192 250 93 83 chr2 23921133 23921190 -226766664 - MIR SINE MIR -49 213 153 2376 91 0 0 chr2 23921690 23921997 -226765857 - AluY SINE Alu -4 307 1 32 26 0 0 chr2 23922061 23922100 -226765754 + AT_rich Low_complexity Low_complexity 1 39 0 680 169 25 25 chr2 23922100 23922218 -226765636 - FLAM_C SINE Alu -15 118 1 191 333 69 14 chr2 23923182 23923254 -226764600 + L2 LINE L2 3194 3269 -3 248 235 118 35 chr2 23924324 23924409 -226763445 + MIR SINE MIR 114 205 -57 2305 45 7 3 chr2 23924982 23925269 -226762585 - AluY SINE Alu -23 288 1 2023 154 0 0 chr2 23925841 23926153 -226761701 - AluSx SINE Alu 0 312 1 970 102 0 0 chr2 23927290 23927418 -226760436 - AluSx SINE Alu -152 160 33 216 261 123 0 chr2 23927608 23927633 -226760221 - L2 LINE L2 -22 3250 3229 678 172 0 17 chr2 23927633 23927749 -226760105 - MER81 DNA DNA 0 114 1 216 261 123 0 chr2 23927749 23927788 -226760066 - L2 LINE L2 -43 3229 3178 799 276 55 57 chr2 23927863 23928001 -226759853 - L2 LINE L2 -22 3291 3154 2219 101 0 0 chr2 23928001 23928297 -226759557 - AluSg SINE Alu -14 296 1 799 276 55 57 chr2 23928297 23928329 -226759525 - L2 LINE L2 -159 3154 3123 2203 99 0 0 chr2 23928329 23928623 -226759231 + AluSq SINE Alu 1 294 -19 799 276 55 57 chr2 23928623 23928817 -226759037 - L2 LINE L2 -190 3123 2927 1842 139 7 16 chr2 23928982 23929292 -226758562 - AluSx SINE Alu -5 307 1 197 378 118 15 chr2 23929311 23929446 -226758408 - L2 LINE L2 -2 3270 3122 249 247 142 13 chr2 23929610 23929722 -226758132 - MIR SINE MIR -66 142 17 209 342 105 26 chr2 23929735 23929849 -226758005 - MIR3 SINE MIR -52 156 34 321 157 0 0 chr2 23929849 23929900 -226757954 - AluSg SINE Alu -187 113 63 28 0 0 0 chr2 23930253 23930281 -226757573 + AT_rich Low_complexity Low_complexity 1 28 0 908 144 7 13 chr2 23931383 23931536 -226756318 + AluJo SINE Alu 1 152 -160 213 267 50 0 chr2 23931595 23931655 -226756199 + L2 LINE L2 1352 1414 -1900 568 298 126 26 chr2 23931670 23931853 -226756001 + L2 LINE L2 1525 1688 -1626 2179 106 0 0 chr2 23931853 23932145 -226755709 + AluSx SINE Alu 1 292 -20 568 298 126 26 chr2 23932145 23932350 -226755504 + L2 LINE L2 1688 1952 -1362 901 182 0 28 chr2 23932353 23932534 -226755320 - FRAM SINE Alu 0 40 1 505 142 132 28 chr2 23932630 23932736 -226755118 + L2 LINE L2 3189 3305 -8 185 158 0 0 chr2 23932760 23932798 -226755056 + L2 LINE L2 3273 3310 -3 200 286 7 65 chr2 23933818 23933972 -226753882 + (CGGGG)n Simple_repeat Simple_repeat 5 149 0 569 255 52 99 chr2 23934925 23935290 -226752564 + MER34 LTR ERV1 1 348 -194 860 161 301 0 chr2 23935317 23935510 -226752344 + AluJo SINE Alu 58 308 -4 262 246 18 0 chr2 23935514 23935571 -226752283 + MER34 LTR ERV1 446 503 -39 1107 141 18 6 chr2 23935885 23936055 -226751799 - FAM SINE Alu -3 172 1 2171 106 7 0 chr2 23937081 23937383 -226750471 + AluSx SINE Alu 1 304 -8 2266 82 0 23 chr2 23938697 23939001 -226748853 - AluY SINE Alu -14 297 1 1730 151 42 3 chr2 23939006 23939290 -226748564 - AluJb SINE Alu -17 295 1 356 271 19 6 chr2 23940343 23940447 -226747407 - MIR3 SINE MIR -3 205 100 191 331 135 7 chr2 23940538 23940686 -226747168 - MER5A DNA MER1_type 0 189 23 489 267 35 19 chr2 23940755 23940901 -226746953 + MIR SINE MIR 15 155 -53 594 75 0 0 chr2 23941347 23941427 -226746427 + (CAGGG)n Simple_repeat Simple_repeat 1 80 0 808 185 0 0 chr2 23942364 23942494 -226745360 - MER20 DNA MER1_type -1 218 89 2330 120 42 3 chr2 23942508 23942865 -226744989 + MER31A LTR ERV1 115 485 0 2740 23 0 0 chr2 23942960 23943259 -226744595 + AluY SINE Alu 1 299 -12 281 185 15 0 chr2 23943480 23943545 -226744309 + CT-rich Low_complexity Low_complexity 3 68 0 911 137 0 0 chr2 23943547 23943671 -226744183 - FLAM_C SINE Alu -18 125 2 266 274 36 24 chr2 23944167 23944251 -226743603 + MER21B LTR ERV1 12 96 -767 706 194 8 22 chr2 23944252 23944386 -226743468 - FLAM_C SINE Alu -1 132 1 1590 203 182 104 chr2 23944412 23944614 -226743240 + MER21B LTR ERV1 39 224 -639 2015 141 0 10 chr2 23944614 23944784 -226743070 - AluSx SINE Alu -9 303 136 1340 113 204 57 chr2 23944784 23945049 -226742805 - AluSx SINE Alu -8 304 1 2015 141 0 10 chr2 23945049 23945184 -226742670 - AluSx SINE Alu -176 136 1 1590 203 182 104 chr2 23945184 23945368 -226742486 + MER21B LTR ERV1 224 392 -471 2143 121 0 0 chr2 23945368 23945657 -226742197 - AluSx SINE Alu -23 289 1 1590 203 182 104 chr2 23945657 23945993 -226741861 + MER21B LTR ERV1 392 819 -44 1256 134 0 0 chr2 23946073 23946244 -226741610 + AluSq SINE Alu 1 171 -142 235 236 0 0 chr2 23946723 23946778 -226741076 + MLT1I LTR MaLR 329 383 -26 1264 92 52 0 chr2 23946824 23946998 -226740856 + AluSp SINE Alu 125 307 -6 2424 63 17 0 chr2 23946999 23947299 -226740555 + AluY SINE Alu 2 306 -5 1826 108 79 11 chr2 23947311 23947590 -226740264 + AluSx SINE Alu 6 303 -9 318 273 13 13 chr2 23947636 23947790 -226740064 + L1ME LINE L1 3830 3983 -2163 1019 161 18 78 chr2 23947806 23948023 -226739831 - AluJb SINE Alu -23 289 86 232 293 30 36 chr2 23948024 23948169 -226739685 + L1ME LINE L1 4103 4248 -1898 2396 51 41 0 chr2 23948169 23948464 -226739390 + AluY SINE Alu 2 308 -3 232 293 30 36 chr2 23948464 23948485 -226739369 + L1ME LINE L1 4248 4268 -1878 451 293 41 53 chr2 23948544 23948956 -226738898 + L1ME LINE L1 4288 4704 -1442 1836 157 51 7 chr2 23948956 23949250 -226738604 + AluJb SINE Alu 1 307 -5 451 293 41 53 chr2 23949250 23949299 -226738555 + L1ME LINE L1 4704 4745 -1401 2154 126 7 3 chr2 23949299 23949608 -226738246 + AluSx SINE Alu 1 310 -2 451 293 41 53 chr2 23949608 23949636 -226738218 + L1ME LINE L1 4745 4772 -1374 358 287 37 38 chr2 23949642 23949810 -226738044 + L1ME LINE L1 5634 5799 -341 387 0 0 0 chr2 23949931 23949974 -226737880 + (CA)n Simple_repeat Simple_repeat 1 43 0 4627 67 0 7 chr2 23950143 23950627 -226737227 - L1PA8 LINE L1 -3 6169 5688 2127 108 3 14 chr2 23950627 23950923 -226736931 - AluSg SINE Alu -17 293 1 4627 67 0 7 chr2 23950923 23951033 -226736821 - L1PA8 LINE L1 -484 5688 5579 1731 149 3 97 chr2 23951036 23951378 -226736476 - AluJo SINE Alu -2 310 1 434 180 62 123 chr2 23951379 23951509 -226736345 - Charlie2a DNA MER1_type -63 2799 2663 1585 207 7 0 chr2 23951509 23951789 -226736065 - AluJo SINE Alu -30 282 1 434 180 62 123 chr2 23951789 23951817 -226736037 - Charlie2a DNA MER1_type -199 2663 2635 1815 131 0 11 chr2 23951817 23952077 -226735777 + AluSx SINE Alu 1 257 -55 434 180 62 123 chr2 23952077 23952161 -226735693 - Charlie2a DNA MER1_type -227 2635 2571 38788 81 11 8 chr2 23952164 23958265 -226729589 + L1PA6 LINE L1 27 6137 -17 3923 179 93 35 chr2 23958265 23958679 -226729175 - Charlie2a DNA MER1_type -272 2590 2202 2214 123 0 0 chr2 23958679 23958988 -226728866 - AluY SINE Alu -2 309 1 3923 179 93 35 chr2 23958988 23959462 -226728392 - Charlie2a DNA MER1_type -660 2202 1628 2216 136 0 0 chr2 23959462 23959771 -226728083 + AluSx SINE Alu 1 309 -3 3923 179 93 35 chr2 23959771 23959940 -226727914 - Charlie2a DNA MER1_type -1234 1628 1470 471 274 34 0 chr2 23960010 23960127 -226727727 - Charlie2b DNA MER1_type -2131 651 531 582 266 79 39 chr2 23960142 23960447 -226727407 - Charlie2b DNA MER1_type -2465 317 1 491 326 23 31 chr2 23960961 23961314 -226726540 + L1PA15 LINE L1 1 350 -7231 11149 180 168 18 chr2 23962363 23963320 -226724534 + L1PA15 LINE L1 2319 3132 -4471 2296 114 7 0 chr2 23963320 23963626 -226724228 - AluSq SINE Alu -5 308 1 11149 180 168 18 chr2 23963626 23965301 -226722553 + L1PA15 LINE L1 3132 4556 -3047 207 0 0 0 chr2 23965301 23965324 -226722530 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 11149 180 168 18 chr2 23965324 23965626 -226722228 + L1PA15 LINE L1 4556 4812 -2791 2481 86 0 0 chr2 23965626 23965929 -226721925 + AluY SINE Alu 1 303 -8 11149 180 168 18 chr2 23965929 23967335 -226720519 + L1PA15 LINE L1 4812 7477 -126 1781 223 84 62 chr2 23967364 23967948 -226719906 + MER21B LTR ERV1 131 727 -136 1955 161 7 0 chr2 23968074 23968365 -226719489 - AluJo SINE Alu -19 293 1 503 246 204 9 chr2 23968946 23969275 -226718579 + L1ME4a LINE L1 5593 5985 -136 2232 112 0 3 chr2 23969303 23969608 -226718246 - AluSq SINE Alu -9 304 1 306 314 131 62 chr2 23969827 23970164 -226717690 + L2 LINE L2 2868 3227 -45 184 216 0 0 chr2 23970169 23970206 -226717648 - L2 LINE L2 -50 3263 3227 1852 182 10 0 chr2 23970297 23970599 -226717255 + AluJo SINE Alu 1 305 -7 2185 125 0 0 chr2 23970601 23970906 -226716948 + AluSq SINE Alu 1 305 -8 183 42 0 0 chr2 23970970 23970994 -226716860 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2763 258 62 36 chr2 23971233 23972044 -226715810 - HERVL40 LTR ERVL -848 4682 3851 1314 238 31 10 chr2 23972049 23972339 -226715515 - LTR40c LTR ERVL -169 296 1 615 220 33 33 chr2 23972687 23972837 -226715017 - L2 LINE L2 0 3272 3123 2132 132 0 0 chr2 23973053 23973349 -226714505 + AluY SINE Alu 1 296 -15 745 176 0 0 chr2 23973377 23973496 -226714358 - FLAM_A SINE Alu -13 120 2 2099 114 3 69 chr2 23973579 23973913 -226713941 + AluSx SINE Alu 1 312 0 2101 125 3 3 chr2 23974021 23974316 -226713538 - AluSx SINE Alu -11 301 7 2197 139 0 0 chr2 23974439 23974749 -226713105 - AluSx SINE Alu -2 310 1 247 190 17 0 chr2 23974754 23974812 -226713042 + L1ME4a LINE L1 6062 6120 -1 318 305 51 8 chr2 23975443 23975561 -226712293 - L2 LINE L2 0 3272 3150 190 285 0 106 chr2 23975632 23975755 -226712099 - L2 LINE L2 -243 3029 2920 * 199 315 67 34 chr2 23975745 23975834 -226712020 + L2 LINE L2 3168 3259 -13 213 39 0 0 chr2 23975834 23975860 -226711994 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 331 253 25 13 chr2 23976470 23976549 -226711305 + MLT1K LTR MaLR 509 588 0 2270 92 3 0 chr2 23976993 23977318 -226710536 + AluSq SINE Alu 1 326 0 324 264 73 27 chr2 23977340 23977450 -226710404 + MIR SINE MIR 30 144 -118 2015 84 80 28 chr2 23977557 23977843 -226710011 - AluSq SINE Alu -12 301 1 1732 150 43 37 chr2 23978330 23978612 -226709242 + MER58B DNA MER1_type 1 287 -2133 2035 110 147 21 chr2 23978612 23978993 -226708861 + MSTB1 LTR MaLR 1 429 -3 1732 150 43 37 chr2 23978993 23979037 -226708817 + MER58B DNA MER1_type 287 329 -12 2193 110 21 0 chr2 23979056 23979347 -226708507 + AluSq SINE Alu 1 297 -16 22 103 0 0 chr2 23980688 23980766 -226707088 + GC_rich Low_complexity Low_complexity 1 78 0 557 183 174 9 chr2 23981543 23981773 -226706081 - L1MEc LINE L1 -2956 3259 2992 1001 198 33 33 chr2 23981796 23982008 -226705846 - AluJo SINE Alu -100 212 1 3227 186 28 93 chr2 23982051 23982106 -226705748 - L1ME1 LINE L1 -5 6161 6104 1693 162 3 24 chr2 23982106 23982396 -226705458 + AluJo SINE Alu 6 289 -23 3227 186 28 93 chr2 23982396 23982569 -226705285 - L1ME1 LINE L1 -62 6104 5921 2054 123 37 7 chr2 23982569 23982869 -226704985 - AluSx SINE Alu -3 309 1 3227 186 28 93 chr2 23982869 23983573 -226704281 - L1ME1 LINE L1 -245 5921 5289 335 77 0 167 chr2 23983582 23983619 -226704235 - L1MB7 LINE L1 -18 6166 6147 2311 64 3 54 chr2 23983619 23983932 -226703922 - AluY SINE Alu -14 297 1 335 77 0 167 chr2 23983932 23983972 -226703882 - L1MB7 LINE L1 -37 6147 6102 3390 157 23 10 chr2 23983999 23984597 -226703257 - L1MB7 LINE L1 -69 6115 5510 2676 238 98 101 chr2 23984596 23984672 -226703182 - L1MEc LINE L1 -5019 1377 1302 * 2052 145 3 0 chr2 23984672 23984969 -226702885 - AluSx SINE Alu -14 298 1 2676 238 98 101 chr2 23984969 23985239 -226702615 - L1MEc LINE L1 -5094 1302 1033 821 150 0 15 chr2 23985239 23985395 -226702459 - FLAM_C SINE Alu 0 133 1 2676 238 98 101 chr2 23985395 23986392 -226701462 - L1MEc LINE L1 -5363 1033 37 * 2759 233 56 58 chr2 23986386 23986809 -226701045 - L1ME LINE L1 -4984 1086 664 13097 110 10 28 chr2 23986809 23989626 -226698228 - L1PA8 LINE L1 0 6172 3382 2759 233 56 58 chr2 23989626 23990277 -226697577 - L1ME LINE L1 -5406 664 81 800 211 11 58 chr2 23990751 23990941 -226696913 + AluJo SINE Alu 125 305 -7 2013 141 3 10 chr2 23991675 23991979 -226695875 + AluSx SINE Alu 1 302 -10 1926 149 0 32 chr2 23993057 23993242 -226694612 - AluJb SINE Alu -1 311 139 2071 123 10 14 chr2 23993242 23993534 -226694320 - AluSx SINE Alu -21 291 1 1926 149 0 32 chr2 23993534 23993664 -226694190 - AluJb SINE Alu -173 139 6 3027 140 35 40 chr2 23993772 23994365 -226693489 - L1MB4 LINE L1 -15 6165 5576 758 241 0 0 chr2 23994497 23994659 -226693195 - FRAM SINE Alu 0 166 5 1990 131 7 7 chr2 23995356 23995639 -226692215 - AluSg SINE Alu -27 283 1 2026 112 36 0 chr2 23995829 23996105 -226691749 + AluSx SINE Alu 12 297 -15 240 242 65 59 chr2 23996848 23997034 -226690820 - L1ME4a LINE L1 -12 6109 5923 203 219 172 0 chr2 23997242 23997306 -226690548 - MIR SINE MIR -124 138 64 2251 116 0 0 chr2 23997318 23997621 -226690233 - AluSx SINE Alu -9 303 1 954 141 52 5 chr2 23997621 23997812 -226690042 - L1MA8 LINE L1 -36 6255 6056 2282 101 0 20 chr2 23997824 23998130 -226689724 + AluSx SINE Alu 1 300 -12 2363 61 10 14 chr2 23998228 23998386 -226689468 - AluSg SINE Alu -18 292 134 2426 80 0 3 chr2 23998386 23998688 -226689166 - AluY SINE Alu -10 301 1 2363 61 10 14 chr2 23998688 23998822 -226689032 - AluSg SINE Alu -176 134 1 5377 146 66 32 chr2 23999585 24000311 -226687543 + Charlie1 DNA MER1_type 1599 2374 -387 2368 75 26 7 chr2 24000311 24000494 -226687360 - AluY SINE Alu 0 311 118 207 0 0 0 chr2 24000494 24000517 -226687337 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2368 75 26 7 chr2 24000517 24000638 -226687216 - AluY SINE Alu -193 118 1 5377 146 66 32 chr2 24000638 24000976 -226686878 + Charlie1 DNA MER1_type 2374 2699 -62 951 122 95 0 chr2 24001010 24001158 -226686696 + AluSc SINE Alu 134 295 -14 1545 141 65 4 chr2 24001306 24001568 -226686286 + AluJo SINE Alu 3 280 -32 1165 131 16 6 chr2 24001571 24001754 -226686100 + L1M2 LINE L1 6 190 -6659 4252 188 198 0 chr2 24001788 24002770 -226685084 + L1M2 LINE L1 565 1740 -5109 2205 78 58 3 chr2 24002839 24003133 -226684721 - AluY SINE Alu -1 310 1 22 0 0 0 chr2 24003730 24003752 -226684102 + AT_rich Low_complexity Low_complexity 1 22 0 235 88 0 0 chr2 24004331 24004365 -226683489 - Alu SINE Alu -5 295 262 3030 225 51 46 chr2 24004375 24005687 -226682167 - L1MCc LINE L1 -4873 2068 734 5966 108 9 8 chr2 24005727 24006593 -226681261 - L1MA2 LINE L1 -1 6303 5434 2025 123 74 0 chr2 24006593 24006877 -226680977 - AluSx SINE Alu -7 305 1 5966 108 9 8 chr2 24006877 24006893 -226680961 - L1MA2 LINE L1 -870 5434 5420 329 167 17 17 chr2 24006893 24006953 -226680901 + LTR45 LTR ERV1 441 500 -25 18199 124 58 91 chr2 24006979 24007559 -226680295 - L1M1 LINE L1 -4140 3425 2827 2082 148 7 0 chr2 24007559 24007869 -226679985 - AluSx SINE Alu 0 312 1 18199 124 58 91 chr2 24007869 24008419 -226679435 - L1M1 LINE L1 -4738 2827 2260 2260 107 0 16 chr2 24008419 24008736 -226679118 - AluSx SINE Alu 0 312 1 577 62 0 82 chr2 24008737 24008834 -226679020 - MER30 DNA MER1_type -90 140 52 1147 130 0 6 chr2 24008834 24009003 -226678851 - AluSg/x SINE Alu -19 293 126 2365 107 0 0 chr2 24009003 24009311 -226678543 - AluSx SINE Alu -2 310 3 18199 124 58 91 chr2 24009311 24011439 -226676415 - L1M1 LINE L1 -5302 2263 16 1208 208 0 25 chr2 24011473 24011757 -226676097 - L1M4 LINE L1 -757 5389 5113 944 141 65 109 chr2 24011789 24012037 -226675817 - L1MCc LINE L1 -6174 249 13 252 0 0 0 chr2 24012649 24012677 -226675177 + (TA)n Simple_repeat Simple_repeat 2 29 0 2433 81 3 0 chr2 24012677 24012984 -226674870 - AluSq SINE Alu -5 308 1 2199 111 0 3 chr2 24013495 24013793 -226674061 + AluSq SINE Alu 1 297 -16 1851 228 45 14 chr2 24013930 24014435 -226673419 - L1MEd LINE L1 -2942 3187 2667 192 254 0 17 chr2 24014447 24014506 -226673348 - MIR SINE MIR -55 207 150 646 226 28 50 chr2 24014540 24014600 -226673254 + MER5B DNA MER1_type 1 61 -117 2320 105 0 0 chr2 24014600 24014896 -226672958 + AluSx SINE Alu 1 296 -16 646 226 28 50 chr2 24014896 24015016 -226672838 + MER5B DNA MER1_type 61 177 -1 1780 218 62 24 chr2 24015963 24016413 -226671441 - MLT1C LTR MaLR 0 467 1 27 0 0 0 chr2 24016664 24016691 -226671163 + AT_rich Low_complexity Low_complexity 1 27 0 398 277 104 51 chr2 24016912 24017119 -226670735 - L1MEd LINE L1 -899 1591 1396 1954 168 0 9 chr2 24017119 24017434 -226670420 - AluJb SINE Alu 0 312 1 398 277 104 51 chr2 24017434 24017730 -226670124 - L1MEd LINE L1 -1094 1396 976 1805 160 13 19 chr2 24018309 24018622 -226669232 + AluJb SINE Alu 2 312 0 2380 106 0 0 chr2 24018961 24019264 -226668590 + AluSx SINE Alu 1 303 -9 3532 171 24 5 chr2 24019599 24020235 -226667619 + L1MB8 LINE L1 5525 6172 -6 21 0 0 0 chr2 24021263 24021284 -226666570 + AT_rich Low_complexity Low_complexity 1 21 0 2229 108 3 3 chr2 24022903 24023199 -226664655 + AluSp SINE Alu 1 296 -17 255 161 0 0 chr2 24023199 24023255 -226664599 + (TA)n Simple_repeat Simple_repeat 1 56 0 804 318 42 19 chr2 24023662 24024137 -226663717 - L2 LINE L2 -15 3298 2813 1811 271 137 10 chr2 24025243 24026141 -226661713 - L2 LINE L2 -978 2336 1325 336 111 0 19 chr2 24026925 24026979 -226660875 + Alu SINE Alu 1 53 -248 473 34 0 0 chr2 24026979 24027038 -226660816 - AluJ/FLAM SINE Alu -212 100 42 1765 125 0 0 chr2 24027052 24027284 -226660570 + AluSx SINE Alu 64 295 -17 2240 118 3 10 chr2 24027835 24028149 -226659705 - AluJb SINE Alu 0 312 1 463 275 0 47 chr2 24028183 24028354 -226659500 - L1MC5 LINE L1 -52 7909 7747 2043 122 0 13 chr2 24028867 24029170 -226658684 + AluSx SINE Alu 1 299 -13 1755 174 17 0 chr2 24029685 24029978 -226657876 - AluJb SINE Alu -14 298 1 321 261 165 9 chr2 24030219 24030334 -226657520 - L2 LINE L2 -2 3270 3138 1421 209 86 36 chr2 24030908 24031548 -226656306 + L1MDa LINE L1 857 1588 -4952 350 123 18 0 chr2 24031593 24031650 -226656204 + L1MD1 LINE L1 6063 6120 -122 262 217 54 54 chr2 24031643 24031772 -226656082 - L1MC5 LINE L1 -287 7674 7546 * 872 180 7 0 chr2 24033507 24033657 -226654197 - FRAM SINE Alu -25 151 1 2048 146 7 0 chr2 24034301 24034602 -226653252 + AluSx SINE Alu 1 303 -9 1698 134 4 43 chr2 24035461 24035737 -226652117 + AluJo SINE Alu 36 300 -12 536 255 149 70 chr2 24036662 24037026 -226650828 - MLT1L LTR MaLR -50 564 110 1658 169 18 0 chr2 24037316 24037588 -226650266 + AluJb SINE Alu 1 277 -35 548 345 158 10 chr2 24037717 24038299 -226649555 + L3 LINE CR1 816 1483 -94 2136 125 0 13 chr2 24038526 24038829 -226649025 - AluSp SINE Alu -14 299 1 1035 149 14 59 chr2 24040140 24040361 -226647493 - L1PA16 LINE L1 -1 6165 5955 244 250 26 0 chr2 24041134 24041210 -226646644 - L1ME3 LINE L1 -206 5956 5879 2331 101 7 0 chr2 24041241 24041538 -226646316 + AluSx SINE Alu 1 299 -13 588 216 41 26 chr2 24041583 24041777 -226646077 - L1ME3 LINE L1 -265 5905 5709 380 113 0 0 chr2 24041813 24041888 -226645966 - AluS SINE Alu 0 305 231 2367 91 0 7 chr2 24041970 24042266 -226645588 - AluSc SINE Alu -15 294 1 367 292 44 13 chr2 24042269 24042495 -226645359 - L1ME3 LINE L1 -1112 5034 4802 319 47 0 0 chr2 24042605 24042648 -226645206 - MADE1 DNA Mariner -37 43 1 809 122 3 16 chr2 24042651 24042794 -226645060 - L1M4 LINE L1 -1537 5003 4860 609 188 194 7 chr2 24042817 24042961 -226644893 + MER20 DNA MER1_type 45 215 -4 907 263 103 23 chr2 24042965 24043010 -226644844 - L1M4 LINE L1 -1695 4845 4805 23 0 0 0 chr2 24043010 24043033 -226644821 + AT_rich Low_complexity Low_complexity 1 23 0 907 263 103 23 chr2 24043033 24043171 -226644683 - L1M4 LINE L1 -1735 4805 4680 1958 92 96 0 chr2 24043171 24043443 -226644411 - AluSx SINE Alu -14 298 1 907 263 103 23 chr2 24043443 24043774 -226644080 - L1M4 LINE L1 -1860 4680 4256 1836 137 11 11 chr2 24043774 24044082 -226643772 - AluSx SINE Alu 0 308 1 907 263 103 23 chr2 24044082 24044112 -226643742 - L1M4 LINE L1 -2284 4256 4230 234 290 84 47 chr2 24044113 24044327 -226643527 - L1MC5 LINE L1 -34 7927 7706 706 247 148 22 chr2 24044380 24044415 -226643439 - L1MEc LINE L1 -4616 1924 1895 2157 153 65 28 chr2 24044415 24044845 -226643009 - L1MC1 LINE L1 0 6333 5888 706 247 148 22 chr2 24044845 24045393 -226642461 - L1MEc LINE L1 -4645 1895 1306 1014 110 86 0 chr2 24045394 24045557 -226642297 - L1PA10 LINE L1 -1 6167 5991 409 262 182 14 chr2 24046237 24046451 -226641403 + L2 LINE L2 2594 2843 -471 357 261 148 0 chr2 24046649 24046764 -226641090 + L2 LINE L2 3182 3313 0 1033 204 33 0 chr2 24048667 24048878 -226638976 - L1MA9 LINE L1 -45 6267 6050 3379 113 87 4 chr2 24048887 24049427 -226638427 - MER51C LTR ERV1 -11 629 45 2719 153 23 50 chr2 24049447 24049595 -226638259 - L1MA9 LINE L1 -248 6064 5914 4015 91 16 4 chr2 24049595 24050142 -226637712 - MER41A LTR ERV1 0 554 1 2719 153 23 50 chr2 24050142 24050549 -226637305 - L1MA9 LINE L1 -398 5914 5524 37094 33 3 1 chr2 24050569 24055784 -226632070 - L1PA4 LINE L1 -3 6152 926 1556 150 62 126 chr2 24055789 24055943 -226631911 - LTR10A LTR ERV1 0 609 447 2229 78 3 0 chr2 24055943 24056226 -226631628 - AluY SINE Alu -27 284 1 1556 150 62 126 chr2 24056226 24056525 -226631329 - LTR10A LTR ERV1 -162 447 185 1374 152 18 72 chr2 24056643 24057011 -226630843 - L1MA9 LINE L1 -743 5403 5131 500 262 84 69 chr2 24057066 24057471 -226630383 - MLT1J1 LTR MaLR -31 415 5 186 296 0 0 chr2 24058004 24058048 -226629806 - L2 LINE L2 -19 3253 3210 2383 85 0 0 chr2 24059286 24059593 -226628261 + AluSx SINE Alu 1 307 -5 410 286 113 0 chr2 24059723 24059856 -226627998 - MIR3 SINE MIR -41 167 20 1889 113 0 0 chr2 24062030 24062295 -226625559 + AluSx SINE Alu 23 287 -25 286 269 117 80 chr2 24062557 24062881 -226624973 + L2 LINE L2 2904 3239 -33 568 279 131 27 chr2 24062919 24063141 -226624713 - MIR SINE MIR 0 262 18 1932 117 0 13 chr2 24067488 24067788 -226620066 + AluSx SINE Alu 17 312 0 236 304 38 13 chr2 24068178 24068257 -226619597 - L2 LINE L2 -40 3232 3152 667 237 89 8 chr2 24068746 24069034 -226618820 + MER46C DNA MER2_type 4 338 0 26 0 0 0 chr2 24070042 24070068 -226617786 + AT_rich Low_complexity Low_complexity 1 26 0 460 246 32 24 chr2 24071132 24071258 -226616596 - MIR SINE MIR -102 160 34 773 293 93 67 chr2 24071277 24072024 -226615830 - L1MEd LINE L1 -2330 3799 750 2238 107 0 0 chr2 24072527 24072827 -226615027 + AluSx SINE Alu 1 300 -12 1992 127 7 10 chr2 24073615 24073923 -226613931 + AluJo SINE Alu 1 307 -5 2286 75 3 0 chr2 24073945 24074240 -226613614 + AluY SINE Alu 1 296 -15 1216 93 0 0 chr2 24074240 24074402 -226613452 + AluY SINE Alu 133 294 -17 294 305 78 1 chr2 24075793 24075922 -226611932 - MIR SINE MIR -65 143 31 184 259 179 45 chr2 24076344 24076456 -226611398 + L2 LINE L2 3138 3264 -8 231 346 90 15 chr2 24077031 24077164 -226610690 - L2 LINE L2 -8 3264 3122 459 181 224 58 chr2 24078550 24078755 -226609099 - MER112 DNA MER1_type -14 246 8 2304 79 0 19 chr2 24079105 24079420 -226608434 + AluY SINE Alu 1 309 -2 2492 142 29 44 chr2 24079423 24079803 -226608051 + MER65A LTR ERV1 2 375 -70 2221 97 3 3 chr2 24079803 24080111 -226607743 - AluSx SINE Alu -2 310 3 2492 142 29 44 chr2 24080111 24080181 -226607673 + MER65A LTR ERV1 375 445 0 1609 153 10 27 chr2 24080555 24080850 -226607004 + AluJo SINE Alu 21 310 -2 222 37 0 0 chr2 24080890 24080917 -226606937 + (GGGGA)n Simple_repeat Simple_repeat 5 31 0 379 161 0 48 chr2 24080923 24081047 -226606807 + GA-rich Low_complexity Low_complexity 3 120 0 402 217 70 0 chr2 24081338 24081453 -226606401 + MER113 DNA MER1_type? 1 123 -398 2151 85 14 0 chr2 24081773 24082066 -226605788 - AluSx SINE Alu -15 297 1 300 316 190 39 chr2 24082077 24082618 -226605236 + L2 LINE L2 1326 1948 -1366 345 303 76 0 chr2 24082812 24082957 -226604897 - MER103 DNA DNA -8 158 3 236 281 16 0 chr2 24083065 24083129 -226604725 + MER3 DNA MER1_type 41 105 -104 188 262 119 24 chr2 24083228 24083312 -226604542 + L2 LINE L2 3169 3260 -12 371 282 17 86 chr2 24083342 24083516 -226604338 + LTR33 LTR ERVL 16 177 -344 594 114 0 0 chr2 24083646 24083725 -226604129 + AluS SINE Alu 2 80 -232 1476 118 0 0 chr2 24084070 24084281 -226603573 + AluSg/x SINE Alu 101 311 -1 903 249 81 92 chr2 24084282 24084774 -226603080 + L1MEd LINE L1 855 1338 -5078 1802 93 12 4 chr2 24084774 24085022 -226602832 + AluSq SINE Alu 1 250 -63 903 249 81 92 chr2 24085022 24085221 -226602633 + L1MEd LINE L1 1338 1538 -4878 350 272 114 30 chr2 24085372 24085574 -226602280 + L1MEd LINE L1 1739 2035 -4572 512 254 228 58 chr2 24085766 24086388 -226601466 + L1MEd LINE L1 2231 2972 -3454 1935 142 0 13 chr2 24086400 24086703 -226601151 + AluSx SINE Alu 1 299 -13 2800 258 96 35 chr2 24086858 24087583 -226600271 + L2 LINE L2 1942 2621 -692 2291 98 0 0 chr2 24087583 24087890 -226599964 + AluSq SINE Alu 1 307 -6 2800 258 96 35 chr2 24087890 24088449 -226599405 + L2 LINE L2 2621 3306 -7 184 219 0 0 chr2 24089139 24089171 -226598683 - L2 LINE L2 -1 3312 3281 294 290 48 0 chr2 24090645 24090707 -226597147 + MIR SINE MIR 14 78 -184 286 290 169 8 chr2 24090777 24090901 -226596953 - MIR SINE MIR -21 241 98 6877 157 26 20 chr2 24091054 24092764 -226595090 + L1MC1 LINE L1 4622 6333 0 4403 159 61 14 chr2 24092774 24093612 -226594242 + L1MB7 LINE L1 5299 6175 -9 1762 136 7 23 chr2 24093768 24093941 -226593913 - AluJb SINE Alu -5 307 140 198 0 0 0 chr2 24093941 24093963 -226593891 + (TCTA)n Simple_repeat Simple_repeat 2 23 0 1762 136 7 23 chr2 24093963 24094091 -226593763 - AluJb SINE Alu -172 140 11 377 285 131 8 chr2 24094173 24094303 -226593551 + MIR SINE MIR 7 152 -110 563 276 90 0 chr2 24094863 24095019 -226592835 + MER5B DNA MER1_type 9 178 0 200 254 134 15 chr2 24095390 24095457 -226592397 + L2 LINE L2 3235 3309 -4 28 91 0 0 chr2 24096436 24096513 -226591341 + AT_rich Low_complexity Low_complexity 1 77 0 188 0 74 0 chr2 24197405 24197432 -226490422 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr2 24198254 24198279 -226489575 + AT_rich Low_complexity Low_complexity 1 25 0 1996 97 4 0 chr2 24198665 24198924 -226488930 - AluSp SINE Alu -53 260 1 2262 107 10 0 chr2 24198974 24199274 -226488580 - AluSx SINE Alu -9 303 1 2668 49 0 0 chr2 24200291 24200596 -226487258 + AluY SINE Alu 1 305 -6 1812 156 0 17 chr2 24201245 24201547 -226486307 + AluJb SINE Alu 1 297 -15 934 145 104 35 chr2 24201647 24201789 -226486065 + L1PA13 LINE L1 5964 6082 -81 2399 58 0 3 chr2 24201789 24202080 -226485774 + AluY SINE Alu 3 292 -19 934 145 104 35 chr2 24202080 24202168 -226485686 + L1PA13 LINE L1 6082 6163 0 1979 139 43 23 chr2 24202261 24202563 -226485291 + AluSx SINE Alu 1 308 -4 384 281 114 9 chr2 24202675 24202789 -226485065 + L2 LINE L2 3147 3272 0 695 242 25 0 chr2 24203159 24203316 -226484538 + MLT1J2 LTR MaLR 63 223 -227 288 301 125 28 chr2 24203318 24203637 -226484217 - L1M4 LINE L1 -1947 4199 3850 2123 125 0 0 chr2 24203649 24203978 -226483876 - AluSx SINE Alu 0 329 1 1540 202 63 25 chr2 24204172 24204539 -226483315 - MER119 DNA MER1_type -54 529 149 1278 299 77 21 chr2 24204972 24205584 -226482270 + L1ME3A LINE L1 5299 5944 -226 2270 119 0 0 chr2 24206197 24206507 -226481347 + AluSq SINE Alu 2 311 -2 219 36 0 0 chr2 24207396 24207424 -226480430 + (CA)n Simple_repeat Simple_repeat 1 28 0 1804 101 3 84 chr2 24207425 24207722 -226480132 + AluY SINE Alu 21 293 -18 913 276 72 32 chr2 24207802 24208300 -226479554 + L1MEd LINE L1 893 1530 -960 2434 71 0 0 chr2 24208300 24208597 -226479257 + AluY SINE Alu 1 297 -14 913 276 72 32 chr2 24208597 24208724 -226479130 + L1MEd LINE L1 1530 1650 -840 718 116 0 0 chr2 24209035 24209130 -226478724 + AluS SINE Alu 5 99 -214 473 204 13 26 chr2 24209500 24209652 -226478202 + pTR5 LTR ERV1 1195 1344 -1094 3336 145 199 3 chr2 24209668 24210240 -226477614 + LTR12 LTR ERV1 5 688 0 313 167 0 0 chr2 24210249 24210297 -226477557 + AluJ/FLAM SINE Alu 37 84 -218 454 299 7 39 chr2 24210799 24210953 -226476901 + MLT1I LTR MaLR 71 219 -190 802 208 8 0 chr2 24211309 24211439 -226476415 - FLAM_A SINE Alu -2 131 1 1493 110 0 46 chr2 24211449 24211619 -226476235 - AluSg/x SINE Alu -15 295 136 2165 97 10 3 chr2 24211619 24211909 -226475945 - AluSg1 SINE Alu -17 292 1 1493 110 0 46 chr2 24211909 24211957 -226475897 - AluSg/x SINE Alu -174 136 87 200 286 79 0 chr2 24212286 24212349 -226475505 - MIR SINE MIR -13 249 182 432 239 301 23 chr2 24212808 24212984 -226474870 + MIR SINE MIR 24 248 -14 653 155 87 63 chr2 24213204 24213456 -226474398 - L1MC5 LINE L1 -125 7836 7579 1399 187 92 75 chr2 24213480 24214092 -226473762 - L1MC5 LINE L1 -450 7511 6821 180 0 0 0 chr2 24214316 24214336 -226473518 + (A)n Simple_repeat Simple_repeat 1 20 0 2241 121 0 0 chr2 24214493 24214798 -226473056 - AluSg SINE Alu -5 305 1 842 287 24 31 chr2 24214903 24215119 -226472735 - Charlie1a DNA MER1_type -2504 257 42 2045 148 64 29 chr2 24215119 24215496 -226472358 + MLT1B LTR MaLR 1 390 0 842 287 24 31 chr2 24215496 24215533 -226472321 - Charlie1a DNA MER1_type -2719 42 6 211 300 0 14 chr2 24216082 24216152 -226471702 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 395 285 114 34 chr2 24216254 24216552 -226471302 + L1MC/D LINE L1 5290 5607 -552 1086 209 29 5 chr2 24216621 24216831 -226471023 + MER20 DNA MER1_type 1 215 -4 1954 92 0 95 chr2 24217303 24217628 -226470226 + AluSq SINE Alu 1 294 -19 538 179 0 0 chr2 24217728 24217812 -226470042 + FRAM SINE Alu 69 152 -24 706 158 190 6 chr2 24217828 24217986 -226469868 - MER44D DNA MER2_type -134 475 19 2561 232 158 10 chr2 24218126 24219234 -226468620 - L1ME3 LINE L1 -2 6160 4901 414 277 71 0 chr2 24219244 24219356 -226468498 + FLAM_A SINE Alu 1 120 -13 2149 121 7 3 chr2 24219364 24219662 -226468192 - AluSx SINE Alu -13 299 1 23 33 0 0 chr2 24219687 24219717 -226468137 + AT_rich Low_complexity Low_complexity 1 30 0 264 59 0 0 chr2 24220716 24220750 -226467104 - Alu SINE Alu -262 38 5 513 327 115 32 chr2 24220759 24221132 -226466722 - L2 LINE L2 -105 3208 2805 2333 69 21 0 chr2 24221163 24221451 -226466403 + AluY SINE Alu 1 294 -17 209 222 16 0 chr2 24221486 24221549 -226466305 + (CA)n Simple_repeat Simple_repeat 2 65 0 309 195 345 18 chr2 24221549 24221662 -226466192 - MARNA DNA Mariner -422 164 15 262 345 18 0 chr2 24222140 24222250 -226465604 - L1ME LINE L1 -309 5855 5744 2193 104 0 3 chr2 24222264 24222551 -226465303 - AluSx SINE Alu -6 306 21 2151 112 0 3 chr2 24223658 24223953 -226463901 + AluSg SINE Alu 17 310 0 240 100 0 0 chr2 24225003 24225043 -226462811 + (A)n Simple_repeat Simple_repeat 1 40 0 348 183 217 35 chr2 24225151 24225266 -226462588 - L2 LINE L2 -3 3310 3175 1972 221 77 52 chr2 24225960 24226722 -226461132 + L1M4 LINE L1 2461 3241 -2905 1173 158 6 0 chr2 24226761 24226944 -226460910 - AluSg/x SINE Alu -9 303 120 641 122 52 0 chr2 24226944 24227059 -226460795 + MER58 DNA MER1_type 93 213 -2207 1072 176 49 15 chr2 24227064 24227268 -226460586 + MER58B DNA MER1_type 130 340 -1 434 191 11 11 chr2 24227822 24227911 -226459943 - Charlie1 DNA MER1_type 0 2761 2673 318 203 0 14 chr2 24228016 24228085 -226459769 + MLT2D LTR ERVL 60 127 -287 2046 126 14 0 chr2 24228085 24228370 -226459484 + AluSq SINE Alu 1 289 -24 243 0 0 0 chr2 24228370 24228397 -226459457 + (GA)n Simple_repeat Simple_repeat 2 28 0 681 151 12 84 chr2 24228477 24228643 -226459211 - MER3 DNA MER1_type 0 2585 2432 398 154 0 99 chr2 24228646 24228737 -226459117 - MER3 DNA MER1_type -95 114 33 180 235 0 20 chr2 24229364 24229415 -226458439 - L2 LINE L2 -313 3000 2951 451 283 100 6 chr2 24229474 24229654 -226458200 + LTR67 LTR ERVL 354 550 -7 654 291 90 4 chr2 24229731 24229975 -226457879 + L1MC/D LINE L1 5498 5762 -2046 217 231 77 0 chr2 24230483 24230535 -226457319 + MER91C DNA MER1_type 43 98 -42 661 94 19 38 chr2 24230753 24230859 -226456995 - Tigger7 DNA MER2_type 0 2491 2388 2142 133 0 0 chr2 24230864 24231165 -226456689 - AluSx SINE Alu -11 301 1 323 0 48 0 chr2 24231269 24231311 -226456543 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 275 338 70 7 chr2 24231543 24231685 -226456169 + MIR3 SINE MIR 37 187 -21 1466 138 176 0 chr2 24232070 24232309 -226455545 - AluJo SINE Alu -31 281 1 209 356 51 51 chr2 24233948 24234066 -226453788 + L2 LINE L2 3149 3266 -6 382 267 42 42 chr2 24234094 24234214 -226453640 - MARNA DNA Mariner -357 229 110 246 380 9 0 chr2 24234265 24234378 -226453476 + L2 LINE L2 2422 2535 -779 1075 201 12 52 chr2 24234550 24234799 -226453055 + MSTD LTR MaLR 1 239 -157 666 200 21 89 chr2 24234837 24234893 -226452961 + MSTD LTR MaLR 218 276 -120 1990 149 3 3 chr2 24234893 24235195 -226452659 + AluJb SINE Alu 1 302 -10 1701 134 141 4 chr2 24235201 24235463 -226452391 + AluSg SINE Alu 1 298 -2 666 200 21 89 chr2 24235463 24235589 -226452265 + MSTD LTR MaLR 281 394 -2 1875 163 0 3 chr2 24235643 24235937 -226451917 - AluJb SINE Alu -19 293 1 2260 116 0 22 chr2 24236879 24237197 -226450657 - AluSq SINE Alu -2 311 1 363 314 70 30 chr2 24237200 24237416 -226450438 - MIR3 SINE MIR -21 187 2 1785 171 0 7 chr2 24237628 24237909 -226449945 - AluJb SINE Alu -33 279 1 41 36 0 0 chr2 24238087 24238142 -226449712 + AT_rich Low_complexity Low_complexity 1 55 0 552 283 11 60 chr2 24238415 24238599 -226449255 + MER5B DNA MER1_type 2 176 -2 2434 88 0 0 chr2 24238757 24239064 -226448790 + AluSc SINE Alu 3 309 0 413 131 0 159 chr2 24239231 24239338 -226448516 - L1MA8 LINE L1 -5 6286 6197 3468 147 76 21 chr2 24239376 24239956 -226447898 + LTR9 LTR ERV1 1 612 0 478 204 32 0 chr2 24239976 24240069 -226447785 + MIR SINE MIR 45 140 -122 957 247 100 53 chr2 24240106 24240599 -226447255 - MER77 LTR ERV1 -4 601 182 533 95 0 0 chr2 24240710 24240784 -226447070 - SVA Other Other -783 603 530 253 161 71 18 chr2 24240786 24240842 -226447012 - MER21B LTR ERV1 -665 198 140 * 258 128 85 0 chr2 24240821 24240868 -226446986 - MER77 LTR ERV1 -394 211 161 1825 169 3 7 chr2 24240970 24241277 -226446577 + AluJb SINE Alu 1 306 -6 303 261 22 22 chr2 24241358 24241450 -226446404 + MIR SINE MIR 171 262 0 2031 111 38 49 chr2 24241743 24242087 -226445767 - L1PA15 LINE L1 -1 6164 5825 1869 133 46 0 chr2 24242089 24242374 -226445480 - AluSx SINE Alu -14 298 1 1561 215 33 26 chr2 24242750 24243202 -226444652 + pTR5 LTR ERV1 743 1197 -1241 2289 86 3 17 chr2 24243870 24244172 -226443682 - AluSp SINE Alu -15 298 1 36 53 0 0 chr2 24244660 24244717 -226443137 + AT_rich Low_complexity Low_complexity 1 57 0 320 244 115 63 chr2 24246327 24246753 -226441101 - L1ME4a LINE L1 -11 6110 5663 424 274 185 45 chr2 24246767 24247146 -226440708 - L2 LINE L2 -856 2458 2027 351 269 43 21 chr2 24248787 24248880 -226438974 + L2 LINE L2 3197 3291 -22 269 350 97 13 chr2 24249021 24249247 -226438607 - MIR SINE MIR -16 246 2 771 279 52 22 chr2 24249375 24249604 -226438250 + MIR SINE MIR 1 236 -26 433 246 79 28 chr2 24249725 24249889 -226437965 - MER5A DNA MER1_type 0 189 7 1720 177 0 49 chr2 24249952 24250280 -226437574 + AluJb SINE Alu 1 312 0 12447 145 29 8 chr2 24250601 24252894 -226434960 + L1PA16 LINE L1 850 3191 -3658 3819 156 16 0 chr2 24252894 24253530 -226434324 + L1PA16 LINE L1 6217 6862 -7 281 279 59 76 chr2 24253588 24254041 -226433813 + L1MEd LINE L1 593 1037 -5082 2171 91 16 56 chr2 24254041 24254360 -226433494 + AluY SINE Alu 1 306 -5 281 279 59 76 chr2 24254360 24254430 -226433424 + L1MEd LINE L1 1037 1107 -5012 432 229 134 55 chr2 24254449 24254836 -226433018 + L1MEd LINE L1 2767 3197 -2932 962 145 23 23 chr2 24254836 24255008 -226432846 - FAM SINE Alu -3 172 1 432 229 134 55 chr2 24255008 24255074 -226432780 + L1MEd LINE L1 3197 3256 -2873 411 172 0 11 chr2 24255218 24255311 -226432543 + L1MC3 LINE L1 7007 7098 -687 230 197 79 92 chr2 24255312 24255388 -226432466 + MLT1F1 LTR MaLR 37 111 -456 1782 166 89 111 chr2 24255390 24255915 -226431939 + L1MD3 LINE L1 7389 7900 -95 1872 108 56 0 chr2 24255915 24256235 -226431619 + AluY SINE Alu 1 335 0 1782 166 89 111 chr2 24256235 24256328 -226431526 + L1MD3 LINE L1 7900 7994 -1 382 197 123 33 chr2 24256627 24256749 -226431105 + L1MEd LINE L1 3524 3656 -2473 2217 88 0 14 chr2 24256779 24257076 -226430778 - AluY SINE Alu -18 293 1 1905 173 0 0 chr2 24257179 24257463 -226430391 - AluJb SINE Alu -23 289 6 27 0 0 0 chr2 24257762 24257789 -226430065 + AT_rich Low_complexity Low_complexity 1 27 0 659 153 90 0 chr2 24258278 24258389 -226429465 - 5S rRNA rRNA 0 121 1 22 0 0 0 chr2 24258506 24258528 -226429326 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr2 24258924 24258966 -226428888 + AT_rich Low_complexity Low_complexity 1 42 0 6690 151 123 54 chr2 24259210 24260663 -226427191 - MER52A LTR ERV1 0 1755 204 276 221 234 0 chr2 24260664 24260741 -226427113 - MER52A LTR ERV1 -1660 95 1 2065 115 31 7 chr2 24261408 24261694 -226426160 - AluSx SINE Alu -19 293 1 2128 79 7 17 chr2 24263532 24263824 -226424030 - AluSq SINE Alu -11 302 14 1975 133 0 13 chr2 24264002 24264310 -226423544 - AluJb SINE Alu -5 307 4 1553 210 17 17 chr2 24265021 24265321 -226422533 - AluJo SINE Alu -12 300 1 2198 121 3 13 chr2 24265427 24265742 -226422112 - AluSx SINE Alu 0 312 1 1737 168 0 0 chr2 24266026 24266306 -226421548 - AluJb SINE Alu -31 281 2 51 42 0 0 chr2 24266432 24266504 -226421350 + AT_rich Low_complexity Low_complexity 1 72 0 12509 119 45 8 chr2 24266826 24268915 -226418939 - Tigger1 DNA MER2_type -1 2417 250 1122 178 6 24 chr2 24268916 24269168 -226418686 - MER52A LTR ERV1 -644 1111 903 2003 113 15 0 chr2 24269341 24269615 -226418239 + AluSx SINE Alu 26 303 -9 744 267 52 14 chr2 24269647 24269935 -226417919 + L1MC4a LINE L1 5597 5895 -1913 1506 186 21 48 chr2 24270163 24270308 -226417546 + AluJo SINE Alu 1 136 -176 2212 105 3 13 chr2 24270308 24270612 -226417242 + AluSx SINE Alu 1 301 -11 1506 186 21 48 chr2 24270612 24270756 -226417098 + AluJo SINE Alu 136 282 -30 1034 166 11 0 chr2 24271223 24271398 -226416456 - MSTD LTR MaLR -1 395 219 286 275 202 14 chr2 24271403 24271509 -226416345 - MLT1K LTR MaLR -53 535 450 231 36 0 0 chr2 24271509 24271537 -226416317 + (TC)n Simple_repeat Simple_repeat 1 28 0 286 275 202 14 chr2 24271537 24271648 -226416206 - MLT1K LTR MaLR -138 450 277 229 250 0 31 chr2 24272600 24272664 -226415190 + MLT1L LTR MaLR 3 64 -551 580 95 9 2 chr2 24273143 24273365 -226414489 + AluSx SINE Alu 1 268 -44 282 370 80 13 chr2 24273641 24273879 -226413975 + L3 LINE CR1 1319 1572 -5 2063 107 0 52 chr2 24273959 24274287 -226413567 - AluSx SINE Alu -1 311 1 259 200 0 0 chr2 24274413 24274468 -226413386 + MLT1L LTR MaLR 550 604 -11 1356 113 13 26 chr2 24274617 24274846 -226413008 + MER1B DNA MER1_type 110 335 -4 2441 70 0 22 chr2 24274846 24275161 -226412693 + AluY SINE Alu 1 308 -3 1543 152 33 63 chr2 24275451 24275754 -226412100 + AluJo SINE Alu 1 294 -18 1046 105 0 0 chr2 24275820 24275953 -226411901 + AluSq/x SINE Alu 1 133 -180 2062 111 20 3 chr2 24275955 24276253 -226411601 + AluSg SINE Alu 1 303 -7 1502 164 106 4 chr2 24276775 24277049 -226410805 - AluJb SINE Alu -10 302 1 21 57 0 0 chr2 24277083 24277118 -226410736 + AT_rich Low_complexity Low_complexity 1 35 0 2495 78 7 0 chr2 24277254 24277563 -226410291 - AluY SINE Alu 0 311 1 202 298 0 0 chr2 24277936 24277983 -226409871 + (CA)n Simple_repeat Simple_repeat 2 48 0 333 250 83 13 chr2 24278004 24278160 -226409694 + L1ME LINE L1 5655 5821 -341 225 214 146 22 chr2 24278363 24278452 -226409402 + L1MC4 LINE L1 7933 8032 -10 191 333 98 8 chr2 24278609 24278741 -226409113 - MIR SINE MIR -59 203 60 270 352 98 26 chr2 24278824 24279017 -226408837 + L3 LINE CR1 911 1117 -460 298 316 10 10 chr2 24279017 24279115 -226408739 + L3 LINE CR1 1329 1426 -151 1761 182 111 5 chr2 24279653 24280355 -226407499 + L1MB7 LINE L1 4939 5734 -446 2109 148 22 0 chr2 24280356 24280727 -226407127 + L1MB7 LINE L1 5790 6168 -16 1626 151 17 48 chr2 24280927 24281219 -226406635 + AluJo SINE Alu 10 292 -20 2202 94 14 3 chr2 24281223 24281510 -226406344 + AluSq SINE Alu 1 290 -23 560 313 114 9 chr2 24282217 24282444 -226405410 + MIR SINE MIR 1 251 -11 597 159 138 94 chr2 24282687 24283007 -226404847 + L1MC5 LINE L1 7209 7542 -419 864 127 6 6 chr2 24283967 24284125 -226403729 + L1MA4 LINE L1 6143 6300 0 750 230 87 32 chr2 24284164 24284382 -226403472 - MIR SINE MIR -32 230 2 339 246 72 14 chr2 24285073 24285211 -226402643 - L1ME LINE L1 -458 5663 5518 826 273 26 18 chr2 24285279 24285506 -226402348 + MIR SINE MIR 5 233 -29 1912 183 137 2 chr2 24285540 24285978 -226401876 + LTR65 LTR ERV1 1 497 -172 2316 109 0 0 chr2 24286250 24286553 -226401301 - AluSx SINE Alu -9 303 1 251 211 18 0 chr2 24287044 24287101 -226400753 - L1MC/D LINE L1 -2056 5752 5695 375 252 35 0 chr2 24287436 24287551 -226400303 - L1ME4a LINE L1 -27 6094 5976 2168 83 2 139 chr2 24287580 24287991 -226399863 - THE1A LTR MaLR 0 355 1 10140 85 6 1 chr2 24287991 24289387 -226398467 - THE1A-int LTR MaLR 0 1580 178 494 257 107 14 chr2 24290322 24290462 -226397392 - L2 LINE L2 -3 3310 3158 361 281 0 0 chr2 24291092 24291174 -226396680 - MIR3 SINE MIR -51 157 76 2398 104 0 0 chr2 24291478 24291787 -226396067 + AluSx SINE Alu 1 309 -3 2418 110 11 0 chr2 24291805 24292177 -226395677 + L1P4 LINE L1 5408 5783 -378 2043 131 0 20 chr2 24292390 24292695 -226395159 - AluSx SINE Alu -13 299 1 2573 72 0 0 chr2 24292967 24293272 -226394582 - AluY SINE Alu -6 305 1 24 53 0 0 chr2 24293611 24293649 -226394205 + AT_rich Low_complexity Low_complexity 1 38 0 189 107 0 0 chr2 24293663 24293691 -226394163 + (TA)n Simple_repeat Simple_repeat 2 29 0 1916 121 0 0 chr2 24293691 24293940 -226393914 - AluSx SINE Alu -22 290 42 23 33 0 0 chr2 24293956 24293986 -226393868 + AT_rich Low_complexity Low_complexity 1 30 0 1113 181 4 73 chr2 24294027 24294090 -226393764 + AluJo SINE Alu 86 152 -160 2214 122 0 0 chr2 24294090 24294386 -226393468 + AluSx SINE Alu 1 296 -16 1113 181 4 73 chr2 24294386 24294554 -226393300 + AluJo SINE Alu 152 301 -11 298 217 14 0 chr2 24294607 24294676 -226393178 + MER112 DNA MER1_type 2 71 -189 351 0 0 0 chr2 24294677 24294716 -226393138 + (TG)n Simple_repeat Simple_repeat 2 40 0 273 143 286 0 chr2 24294767 24294830 -226393024 + MER112 DNA MER1_type 174 254 -6 2741 98 8 0 chr2 24296584 24296950 -226390904 - L1PA13 LINE L1 -3 6160 5792 1859 84 21 0 chr2 24296951 24297190 -226390664 + L1PA13 LINE L1 5524 5767 -394 198 0 0 0 chr2 24297214 24297236 -226390618 + (TTG)n Simple_repeat Simple_repeat 3 24 0 260 270 110 10 chr2 24297456 24297556 -226390298 - MIR SINE MIR -65 197 88 208 430 39 12 chr2 24297611 24297867 -226389987 + L2 LINE L2 2430 2692 -622 2439 42 0 11 chr2 24298972 24299281 -226388573 + AluY SINE Alu 1 306 0 21 0 0 0 chr2 24299281 24299302 -226388552 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 24299419 24299448 -226388406 + AT_rich Low_complexity Low_complexity 1 29 0 1404 164 5 5 chr2 24299479 24299699 -226388155 - AluJo SINE Alu -92 220 1 367 311 40 13 chr2 24299779 24299930 -226387924 - MIR SINE MIR -102 160 6 316 224 204 0 chr2 24299926 24300024 -226387830 - L2 LINE L2 -2 3311 3194 * 805 172 240 30 chr2 24300025 24300258 -226387596 + MLT1J1 LTR MaLR 2 283 -163 2342 81 3 0 chr2 24300339 24300637 -226387217 - AluSp SINE Alu -14 299 1 2876 130 82 13 chr2 24300688 24301165 -226386689 + L1PA16 LINE L1 5657 6166 0 386 245 48 53 chr2 24301602 24301790 -226386064 - HAL1 LINE L1 -327 2180 1994 2460 74 0 3 chr2 24302022 24302321 -226385533 - AluSq SINE Alu -15 298 1 326 304 133 57 chr2 24302430 24302957 -226384897 - L2 LINE L2 -820 2494 1928 443 231 93 9 chr2 24302991 24303099 -226384755 + MLT1J LTR MaLR 395 511 0 22 35 0 0 chr2 24303548 24303577 -226384277 + AT_rich Low_complexity Low_complexity 1 29 0 247 302 0 35 chr2 24303841 24303957 -226383897 + HAL1b LINE L1 313 424 -924 222 286 86 0 chr2 24304519 24304589 -226383265 - L2 LINE L2 -8 3264 3189 1707 166 68 91 chr2 24304591 24305044 -226382810 - MSTB2 LTR MaLR 0 457 15 210 276 9 67 chr2 24305166 24305271 -226382583 - L2 LINE L2 -183 3089 2991 882 320 89 42 chr2 24305296 24305984 -226381870 - L2 LINE L2 -453 2861 2142 1712 180 17 3 chr2 24306025 24306320 -226381534 + AluJo SINE Alu 1 299 -13 3382 186 26 6 chr2 24306371 24307027 -226380827 + L1MC3 LINE L1 6371 7039 -746 255 175 0 150 chr2 24307074 24307154 -226380700 + MLT1F1 LTR MaLR 35 102 -465 191 344 38 15 chr2 24307154 24307285 -226380569 - L2 LINE L2 -1323 1991 1858 2144 109 14 0 chr2 24307368 24307653 -226380201 - AluSx SINE Alu -23 289 1 438 169 0 28 chr2 24307714 24307785 -226380069 + AluJ/FRAM SINE Alu 228 296 -16 698 236 108 56 chr2 24308228 24308646 -226379208 - MLT1H1 LTR MaLR -55 494 32 265 319 0 0 chr2 24309082 24309154 -226378700 + L1MC/D LINE L1 5564 5635 -2173 2328 99 0 3 chr2 24309271 24309573 -226378281 + AluY SINE Alu 1 301 -10 2246 125 62 28 chr2 24309656 24310008 -226377846 - THE1B LTR MaLR 0 364 1 10385 102 24 9 chr2 24310008 24311140 -226376714 - THE1B-int LTR MaLR 0 1580 420 2284 88 0 14 chr2 24311140 24311434 -226376420 - AluY SINE Alu -21 290 1 10385 102 24 9 chr2 24311434 24311742 -226376112 - THE1B-int LTR MaLR -1160 420 118 357 125 0 0 chr2 24311844 24311900 -226375954 + (A)n Simple_repeat Simple_repeat 1 56 0 874 218 24 0 chr2 24311913 24312083 -226375771 - AluJb SINE Alu -2 310 137 297 274 0 24 chr2 24312100 24312184 -226375670 + L2 LINE L2 3228 3309 -4 437 299 29 58 chr2 24312194 24312608 -226375246 + L1M4 LINE L1 2451 2852 -3294 1984 127 21 0 chr2 24312737 24313061 -226374793 + AluSx SINE Alu 4 312 0 21 57 0 0 chr2 24313165 24313200 -226374654 + AT_rich Low_complexity Low_complexity 1 35 0 795 257 68 89 chr2 24313347 24313777 -226374077 + L1M4 LINE L1 3631 4047 -2099 1308 170 158 19 chr2 24313777 24313923 -226373931 + AluJb SINE Alu 1 125 -177 2219 117 0 3 chr2 24313923 24314221 -226373633 + AluSx SINE Alu 1 297 -15 1308 170 158 19 chr2 24314221 24314339 -226373515 + AluJb SINE Alu 125 302 0 795 257 68 89 chr2 24314339 24314492 -226373362 + L1M4 LINE L1 4047 4202 -1944 3494 194 32 57 chr2 24314493 24315364 -226372490 - L1MCb LINE L1 -4958 1087 239 263 186 29 57 chr2 24315366 24315436 -226372418 + Charlie1 DNA MER1_type 1589 1656 -1105 58 38 0 0 chr2 24315436 24315515 -226372339 + AT_rich Low_complexity Low_complexity 1 79 0 917 119 0 0 chr2 24315518 24315636 -226372218 - FLAM_C SINE Alu -15 118 1 5057 170 70 31 chr2 24315637 24315651 -226372203 + Charlie1 DNA MER1_type 1630 1642 -1119 2326 107 0 0 chr2 24315651 24315949 -226371905 - AluSx SINE Alu -14 298 1 5057 170 70 31 chr2 24315949 24317019 -226370835 + Charlie1 DNA MER1_type 1642 2756 -5 2258 94 0 0 chr2 24317043 24317330 -226370524 + AluSg SINE Alu 1 287 -23 322 325 35 30 chr2 24317352 24317521 -226370333 + L1MC/D LINE L1 5672 5841 -1967 2084 132 0 0 chr2 24317521 24317817 -226370037 + AluSx SINE Alu 1 296 -16 2403 101 0 0 chr2 24317980 24318287 -226369567 + AluSc SINE Alu 1 307 -2 189 0 0 0 chr2 24320264 24320285 -226367569 + (ATG)n Simple_repeat Simple_repeat 1 21 0 609 266 75 111 chr2 24320297 24320831 -226367023 - MLT1K LTR MaLR 0 588 74 2197 106 26 0 chr2 24320984 24321286 -226366568 + AluSp SINE Alu 1 310 -3 23 0 0 0 chr2 24321860 24321883 -226365971 + AT_rich Low_complexity Low_complexity 1 23 0 2264 103 3 3 chr2 24322428 24322729 -226365125 + AluSx SINE Alu 1 301 -11 267 392 32 18 chr2 24323638 24323948 -226363906 - L2 LINE L2 -240 3032 2719 3321 220 60 49 chr2 24324808 24325918 -226361936 - Charlie7 DNA MER1_type -17 2595 1474 2479 80 3 0 chr2 24326055 24326366 -226361488 + AluSp SINE Alu 1 312 -1 290 340 21 37 chr2 24328027 24328218 -226359636 + L2 LINE L2 3124 3311 -2 324 223 82 100 chr2 24328521 24328741 -226359113 + L1MCa LINE L1 1318 1533 -4893 2271 90 14 0 chr2 24328779 24329068 -226358786 - AluSg SINE Alu -17 293 1 375 302 10 0 chr2 24329284 24329380 -226358474 + MIR SINE MIR 46 142 -120 292 172 0 35 chr2 24329392 24329450 -226358404 + L2 LINE L2 3256 3311 -2 238 302 42 21 chr2 24329705 24329801 -226358053 + MIR3 SINE MIR 103 200 -8 271 308 115 0 chr2 24330323 24330453 -226357401 - MIR3 SINE MIR -9 199 55 323 274 158 21 chr2 24330557 24330747 -226357107 - MIR SINE MIR -29 233 18 28 61 0 0 chr2 24334486 24334535 -226353319 + GC_rich Low_complexity Low_complexity 1 49 0 308 302 126 39 chr2 24334757 24335042 -226352812 + L1M2 LINE L1 608 917 -5932 201 74 0 0 chr2 24335196 24335223 -226352631 + (CCG)n Simple_repeat Simple_repeat 2 28 0 197 56 0 56 chr2 24335262 24335298 -226352556 + (CCCG)n Simple_repeat Simple_repeat 3 36 0 21 0 0 0 chr2 24335316 24335337 -226352517 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 24335375 24335412 -226352442 + GC_rich Low_complexity Low_complexity 1 37 0 239 216 0 0 chr2 24335489 24335540 -226352314 + C-rich Low_complexity Low_complexity 4 54 0 235 258 88 44 chr2 24335638 24335797 -226352057 + MIR3 SINE MIR 1 166 -42 194 333 42 0 chr2 24336109 24336181 -226351673 + L3 LINE CR1 1405 1479 -98 216 162 0 0 chr2 24336637 24336674 -226351180 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 193 329 105 22 chr2 24336949 24337177 -226350677 + L2 LINE L2 1914 2160 -1154 2347 83 0 3 chr2 24337407 24337708 -226350146 - AluSq SINE Alu -11 302 3 2008 99 0 87 chr2 24338521 24338843 -226349011 + AluSx SINE Alu 17 310 -2 2187 223 50 41 chr2 24338866 24339449 -226348405 + L1ME3A LINE L1 5557 6144 -26 191 314 0 0 chr2 24339639 24339690 -226348164 - L3 LINE CR1 -15 1562 1512 1764 112 98 0 chr2 24340487 24340764 -226347090 + AluY SINE Alu 1 304 -7 2408 80 0 3 chr2 24340770 24341070 -226346784 + AluSq SINE Alu 1 299 -14 346 291 95 25 chr2 24341610 24341768 -226346086 - L1MEd LINE L1 -5945 174 6 24 0 0 0 chr2 24341833 24341857 -226345997 + AT_rich Low_complexity Low_complexity 1 24 0 757 147 7 73 chr2 24342546 24342696 -226345158 - AluJo SINE Alu -89 223 84 396 309 0 0 chr2 24342697 24342791 -226345063 + L2 LINE L2 2727 2820 -494 1572 169 6 98 chr2 24343156 24343493 -226344361 + AluJo SINE Alu 1 306 -6 1969 175 19 30 chr2 24343749 24344115 -226343739 + MLT1A1 LTR MaLR 4 365 0 818 263 79 4 chr2 24344218 24344446 -226343408 + MIR SINE MIR 1 245 -17 835 186 0 0 chr2 24344451 24344580 -226343274 - FLAM_C SINE Alu -4 129 1 216 316 158 9 chr2 24344599 24344713 -226343141 + L2 LINE L2 3179 3309 -4 2528 93 48 25 chr2 24345265 24345621 -226342233 + THE1B LTR MaLR 1 364 0 360 152 45 89 chr2 24345672 24345784 -226342070 + L1ME4a LINE L1 5949 6055 -66 1653 296 39 10 chr2 24345848 24346335 -226341519 + MLT1J LTR MaLR 8 508 -3 480 286 89 17 chr2 24346489 24346736 -226341118 + L1ME3A LINE L1 5645 5906 -264 863 164 11 32 chr2 24347219 24347416 -226340438 - L1MC3 LINE L1 0 7785 7613 24 0 0 0 chr2 24347540 24347564 -226340290 + AT_rich Low_complexity Low_complexity 1 24 0 2334 74 3 13 chr2 24348492 24348791 -226339063 - AluSg SINE Alu -14 296 1 1992 113 10 27 chr2 24348791 24349091 -226338763 - AluSx SINE Alu -17 295 1 2486 64 0 0 chr2 24349210 24349506 -226338348 - AluY SINE Alu -15 296 1 203 189 0 0 chr2 24350353 24350390 -226337464 + A-rich Low_complexity Low_complexity 1 37 0 205 276 92 59 chr2 24350659 24350811 -226337043 + MIR SINE MIR 21 177 -85 205 267 0 0 chr2 24350878 24350923 -226336931 + L2 LINE L2 3266 3310 -3 186 208 0 0 chr2 24351543 24351591 -226336263 + (ATG)n Simple_repeat Simple_repeat 1 48 0 365 264 62 56 chr2 24351591 24351735 -226336119 - MIR SINE MIR -2 260 116 181 287 19 83 chr2 24351900 24352008 -226335846 - MIR3 SINE MIR -16 192 92 2363 83 10 0 chr2 24352085 24352386 -226335468 - AluSx SINE Alu -8 304 1 207 337 21 105 chr2 24352648 24352838 -226335016 - L2 LINE L2 -209 3063 2890 186 43 0 0 chr2 24353185 24353208 -226334646 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1851 149 29 19 chr2 24353741 24353910 -226333944 - AluJo SINE Alu -1 311 136 2270 104 0 13 chr2 24353910 24354219 -226333635 - AluSx SINE Alu -7 305 1 1851 149 29 19 chr2 24354219 24354357 -226333497 - AluJo SINE Alu -176 136 1 189 252 92 76 chr2 24354401 24354520 -226333334 - MIR SINE MIR -107 155 35 286 287 46 0 chr2 24354534 24354621 -226333233 + MIR SINE MIR 56 146 -116 22 0 0 0 chr2 24354801 24354823 -226333031 + AT_rich Low_complexity Low_complexity 1 22 0 363 286 18 18 chr2 24354869 24354981 -226332873 - L2 LINE L2 -3 3310 3199 1655 156 9 58 chr2 24355858 24356186 -226331668 + AluJb SINE Alu 1 312 0 433 247 294 4 chr2 24356391 24356646 -226331208 - L2 LINE L2 -812 2502 2174 194 309 56 16 chr2 24358076 24358202 -226329652 + L3 LINE CR1 639 769 -808 199 324 69 20 chr2 24358241 24358343 -226329511 - MIR SINE MIR -3 259 153 2328 276 66 73 chr2 24359263 24360019 -226327835 - L1MEc LINE L1 -4842 1879 1138 2510 77 0 0 chr2 24360019 24360330 -226327524 - AluY SINE Alu 0 311 1 2328 276 66 73 chr2 24360330 24361089 -226326765 - L1MEc LINE L1 -5583 1138 375 931 282 56 11 chr2 24361935 24362293 -226325561 - HsTC2 DNA Tc2 -1043 855 482 5513 213 64 51 chr2 24363766 24365398 -226322456 - L1MDa LINE L1 -4691 1849 196 * 7363 160 36 10 chr2 24365376 24367423 -226320431 + L1MA5 LINE L1 3681 5804 -496 1380 127 47 4 chr2 24367523 24367776 -226320078 + L1MA5 LINE L1 6027 6290 -10 235 326 84 22 chr2 24368418 24368596 -226319258 - MIR SINE MIR -17 245 57 23 68 0 0 chr2 24369207 24369251 -226318603 + AT_rich Low_complexity Low_complexity 1 44 0 319 236 199 29 chr2 24369348 24369589 -226318265 - L1M4 LINE L1 -1300 4846 4565 2228 97 0 3 chr2 24369589 24369899 -226317955 + AluSx SINE Alu 1 309 -3 369 174 14 0 chr2 24369899 24369968 -226317886 + AluSc SINE Alu 132 201 -98 582 217 0 8 chr2 24369973 24370121 -226317733 - AluJb SINE Alu 0 309 163 881 171 162 44 chr2 24370122 24370350 -226317504 - AluSq SINE Alu -58 255 1 318 302 47 44 chr2 24370782 24371061 -226316793 - L1ME LINE L1 -5949 581 34 328 292 96 88 chr2 24371107 24371367 -226316487 - HAL1 LINE L1 -1430 1077 816 338 333 85 0 chr2 24371375 24371516 -226316338 - MER5A DNA MER1_type 0 189 37 180 0 0 0 chr2 24371675 24371695 -226316159 + (TCCCC)n Simple_repeat Simple_repeat 4 23 0 1348 222 33 0 chr2 24371695 24371970 -226315884 - AluJo SINE Alu -26 286 3 372 88 0 0 chr2 24373227 24373284 -226314570 + (TG)n Simple_repeat Simple_repeat 1 57 0 661 280 43 14 chr2 24374411 24374622 -226313232 + L2 LINE L2 3091 3307 -6 532 226 48 30 chr2 24374949 24375117 -226312737 + MIR SINE MIR 92 262 0 218 315 46 54 chr2 24375224 24375354 -226312500 + L2 LINE L2 2888 3016 -256 31 26 0 0 chr2 24375368 24375406 -226312448 + AT_rich Low_complexity Low_complexity 1 38 0 414 244 207 6 chr2 24375538 24375702 -226312152 + L2 LINE L2 3117 3313 0 234 0 0 0 chr2 24376175 24376201 -226311653 + (T)n Simple_repeat Simple_repeat 1 26 0 438 276 51 39 chr2 24377219 24377375 -226310479 - MIR3 SINE MIR -25 183 26 21 57 0 0 chr2 24378806 24378841 -226309013 + AT_rich Low_complexity Low_complexity 1 35 0 217 162 0 0 chr2 24379643 24379680 -226308174 - L2 LINE L2 0 3272 3236 216 264 209 0 chr2 24380873 24380964 -226306890 + L2 LINE L2 3204 3313 0 2165 160 26 50 chr2 24381035 24381094 -226306760 - MLT2D LTR ERVL 0 414 355 201 39 0 0 chr2 24381094 24381120 -226306734 + (CTGGGG)n Simple_repeat Simple_repeat 1 26 0 2165 160 26 50 chr2 24381120 24381378 -226306476 - MLT2D LTR ERVL -59 355 107 2920 52 0 0 chr2 24381378 24381742 -226306112 - L1PA5 LINE L1 -1 6153 5790 2165 160 26 50 chr2 24381742 24381842 -226306012 - MLT2D LTR ERVL -307 107 6 621 197 0 48 chr2 24382352 24382499 -226305355 - L1PA16 LINE L1 0 6166 6027 269 363 51 61 chr2 24383387 24383682 -226304172 + L2 LINE L2 2685 2976 -338 705 189 0 8 chr2 24383738 24383860 -226303994 + FLAM_C SINE Alu 1 121 -12 321 272 48 72 chr2 24384140 24384265 -226303589 + L2 LINE L2 3175 3296 -17 456 316 51 6 chr2 24384403 24384561 -226303293 - MIR3 SINE MIR -9 199 35 1220 159 71 128 chr2 24385147 24385720 -226302134 - L1MA9 LINE L1 -25 6266 5787 327 65 0 0 chr2 24385720 24385766 -226302088 + (TG)n Simple_repeat Simple_repeat 2 47 0 1220 159 71 128 chr2 24385766 24385869 -226301985 - L1MA9 LINE L1 -504 5787 5680 1826 134 7 10 chr2 24385869 24386167 -226301687 - L1PB3 LINE L1 -1 6153 5857 33755 69 5 9 chr2 24386172 24391548 -226296306 + L1PA6 LINE L1 803 6153 -1 2141 186 37 14 chr2 24391551 24391982 -226295872 - L1MA8 LINE L1 -423 5868 5428 1282 238 3 33 chr2 24393365 24393668 -226294186 + AluJo SINE Alu 1 294 -8 394 280 84 76 chr2 24393669 24393817 -226294037 + L3 LINE CR1 543 695 -882 2215 103 3 0 chr2 24393817 24394117 -226293737 + AluY SINE Alu 1 301 -10 394 280 84 76 chr2 24394117 24394243 -226293611 + L3 LINE CR1 695 819 -758 4454 190 38 20 chr2 24394326 24394354 -226293500 + L1MA9 LINE L1 4928 4954 -1358 2025 154 0 3 chr2 24394354 24394660 -226293194 + AluJb SINE Alu 1 305 -7 4454 190 38 20 chr2 24394660 24395909 -226291945 + L1MA9 LINE L1 4954 6228 -84 981 166 60 10 chr2 24395909 24396108 -226291746 + MER2 DNA MER2_type 2 210 -135 289 109 0 0 chr2 24396216 24396262 -226291592 + L1MA9 LINE L1 6228 6273 -39 320 130 0 19 chr2 24396275 24396329 -226291525 - Alu SINE Alu -8 294 242 21 0 0 0 chr2 24396344 24396365 -226291489 + AT_rich Low_complexity Low_complexity 1 21 0 580 310 64 86 chr2 24396776 24397154 -226290700 + L3 LINE CR1 1028 1396 -181 2023 124 10 7 chr2 24397154 24397453 -226290401 + AluSx SINE Alu 1 300 -12 580 310 64 86 chr2 24397453 24397529 -226290325 + L3 LINE CR1 1396 1472 -105 2168 107 0 7 chr2 24398092 24398383 -226289471 + AluSq SINE Alu 1 289 -24 1574 175 29 16 chr2 24398411 24398707 -226289147 + AluJb SINE Alu 1 303 -9 180 77 0 0 chr2 24398707 24398733 -226289121 + (TAAG)n Simple_repeat Simple_repeat 2 27 0 1574 175 29 16 chr2 24398733 24398744 -226289110 + AluJb SINE Alu 303 312 0 2415 81 0 0 chr2 24399048 24399356 -226288498 - AluSc SINE Alu -1 308 1 2546 65 0 0 chr2 24399367 24399677 -226288177 - AluY SINE Alu -1 310 1 265 282 99 30 chr2 24400522 24400653 -226287201 + L2 LINE L2 3172 3311 -2 678 256 143 74 chr2 24400855 24401065 -226286789 - L2 LINE L2 -1 3312 3118 4222 165 52 8 chr2 24401065 24401889 -226285965 + L1MA9 LINE L1 5449 6308 -4 678 256 143 74 chr2 24401889 24402183 -226285671 - L2 LINE L2 -195 3118 2771 2777 248 43 26 chr2 24402232 24403178 -226284676 - L1ME1 LINE L1 -9 6157 5194 1168 165 25 53 chr2 24403221 24403464 -226284390 - AluJo SINE Alu -76 236 1 997 178 160 17 chr2 24403472 24403823 -226284031 - L1MB8 LINE L1 -1 6177 5765 * 4006 236 34 20 chr2 24403816 24404937 -226282917 - L1MB8 LINE L1 -1294 4852 3716 363 191 217 35 chr2 24406506 24406621 -226281233 + L2 LINE L2 3175 3310 -3 189 0 0 0 chr2 24406748 24406769 -226281085 + (T)n Simple_repeat Simple_repeat 1 21 0 2369 90 0 0 chr2 24407643 24407944 -226279910 + AluSq SINE Alu 1 301 -12 293 359 14 75 chr2 24408152 24408500 -226279354 - L2 LINE L2 -98 3174 2848 221 370 37 22 chr2 24409238 24409373 -226278481 + L3 LINE CR1 1175 1311 -266 510 228 239 30 chr2 24409402 24409435 -226278419 - MIR SINE MIR -24 238 213 315 71 0 0 chr2 24409435 24409477 -226278377 + (TA)n Simple_repeat Simple_repeat 2 43 0 2335 65 0 7 chr2 24409477 24409770 -226278084 - AluY SINE Alu -20 291 1 510 228 239 30 chr2 24409770 24409932 -226277922 - MIR SINE MIR -48 214 1 403 253 112 28 chr2 24409971 24410149 -226277705 - L1ME3A LINE L1 -329 5841 5649 225 91 0 0 chr2 24411145 24411178 -226276676 + L1MC4a LINE L1 6361 6393 -1415 1420 292 92 39 chr2 24411659 24412324 -226275530 + HAL1 LINE L1 4 703 -1804 630 189 52 13 chr2 24412315 24412468 -226275386 + L1MC4a LINE L1 6336 6494 -1314 * 478 301 118 16 chr2 24412488 24412674 -226275180 + HAL1 LINE L1 728 932 -1575 379 178 20 20 chr2 24412698 24412799 -226275055 + (CATATA)n Simple_repeat Simple_repeat 3 103 0 851 269 97 11 chr2 24412825 24413186 -226274668 + HAL1 LINE L1 997 1388 -1119 539 283 128 54 chr2 24413163 24413730 -226274124 + L1ME3A LINE L1 5321 5937 -233 * 21 0 0 0 chr2 24414334 24414355 -226273499 + GC_rich Low_complexity Low_complexity 1 21 0 1574 170 0 18 chr2 24414355 24414632 -226273222 - AluJo SINE Alu -30 282 11 430 99 81 36 chr2 24414841 24414952 -226272902 + L1PA2 LINE L1 6034 6149 -6 716 147 18 43 chr2 24414952 24415107 -226272747 + L1MA5A LINE L1 6135 6293 -4 1641 209 86 87 chr2 24415107 24415862 -226271992 + L1M4 LINE L1 3830 4583 -1563 27 0 0 0 chr2 24416535 24416562 -226271292 + AT_rich Low_complexity Low_complexity 1 27 0 290 320 26 13 chr2 24417255 24417408 -226270446 - Charlie4 DNA MER1_type -1384 577 423 840 227 89 0 chr2 24417722 24417925 -226269929 + MER58A DNA MER1_type 4 224 0 2593 51 0 3 chr2 24418155 24418466 -226269388 - AluY SINE Alu -1 310 1 341 333 83 11 chr2 24418602 24418782 -226269072 + L2 LINE L2 2168 2360 -954 * 404 336 148 38 chr2 24418779 24419172 -226268682 + L2 LINE L2 2837 3272 0 2141 114 3 0 chr2 24419265 24419562 -226268292 + AluSx SINE Alu 1 298 -14 192 219 83 115 chr2 24419623 24419719 -226268135 - MIR SINE MIR -100 108 16 973 101 0 34 chr2 24419734 24419883 -226267971 + L1MC1 LINE L1 6016 6159 -174 359 162 27 0 chr2 24419992 24420066 -226267788 + L1MC1 LINE L1 6258 6333 0 248 91 23 0 chr2 24420083 24420127 -226267727 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1812 152 34 7 chr2 24420332 24420628 -226267226 - AluJo SINE Alu -3 309 6 2402 92 3 0 chr2 24420830 24421136 -226266718 + AluSp SINE Alu 2 308 -5 2160 105 7 20 chr2 24421334 24421640 -226266214 + AluSq SINE Alu 1 302 -11 3560 205 43 47 chr2 24422120 24423175 -226264679 + L1ME1 LINE L1 40 1181 -5215 1170 184 101 14 chr2 24423189 24423467 -226264387 + L1ME1 LINE L1 4632 4933 -1282 986 201 43 39 chr2 24423498 24423777 -226264077 + L1ME1 LINE L1 5877 6156 -79 468 216 36 22 chr2 24423783 24423922 -226263932 + L1MB8 LINE L1 6036 6176 -2 1335 168 84 14 chr2 24423988 24424274 -226263580 - AluSx SINE Alu -6 306 1 5415 88 36 50 chr2 24424274 24425124 -226262730 - L1MA5A LINE L1 -170 6127 5288 195 42 0 0 chr2 24425124 24425148 -226262706 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5415 88 36 50 chr2 24425148 24425183 -226262671 - L1MA5A LINE L1 -1009 5288 5254 1045 252 156 15 chr2 24425196 24425812 -226262042 - L1ME LINE L1 -2297 3783 3081 2267 101 0 3 chr2 24425885 24426182 -226261672 + AluSg SINE Alu 1 296 -14 498 75 0 0 chr2 24426183 24426250 -226261604 + (TA)n Simple_repeat Simple_repeat 2 68 0 1418 253 48 23 chr2 24426276 24426802 -226261052 - L1ME LINE L1 -3169 2911 2373 653 168 80 0 chr2 24426804 24426929 -226260925 + AluJo SINE Alu 1 135 -177 2021 259 82 69 chr2 24426931 24428286 -226259568 - L1ME LINE L1 -3699 2381 1044 414 100 0 0 chr2 24428286 24428346 -226259508 + (TG)n Simple_repeat Simple_repeat 2 61 0 2021 259 82 69 chr2 24428346 24428584 -226259270 - L1ME LINE L1 -5036 1044 810 225 65 0 0 chr2 24428584 24428615 -226259239 + (TA)n Simple_repeat Simple_repeat 2 32 0 2021 259 82 69 chr2 24428615 24428866 -226258988 - L1ME LINE L1 -5270 810 520 2316 204 79 18 chr2 24428866 24429424 -226258430 + L1MD2 LINE L1 5600 6191 -168 784 290 27 53 chr2 24429431 24429769 -226258085 - L1ME LINE L1 -5735 335 7 298 283 33 0 chr2 24430693 24430845 -226257009 + (TA)n Simple_repeat Simple_repeat 2 158 0 401 255 59 39 chr2 24431051 24431204 -226256650 - L1ME3A LINE L1 -6 6164 6009 2272 65 3 59 chr2 24431486 24431808 -226256046 + AluY SINE Alu 1 304 -7 886 152 236 0 chr2 24431880 24432071 -226255783 - MER46A DNA MER2_type 0 236 1 353 241 19 134 chr2 24432406 24432644 -226255210 - L1MC5 LINE L1 -11 8031 7783 618 197 28 84 chr2 24432885 24433063 -226254791 - L1MC4 LINE L1 -376 7666 7499 222 118 0 0 chr2 24433112 24433146 -226254708 + (T)n Simple_repeat Simple_repeat 1 34 0 667 233 51 81 chr2 24433718 24433954 -226253900 + MIR SINE MIR 27 255 -7 354 237 41 10 chr2 24434000 24434097 -226253757 + MIR SINE MIR 133 232 -30 207 200 0 0 chr2 24434355 24434400 -226253454 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2113 107 7 0 chr2 24434705 24434995 -226252859 - AluSg SINE Alu -18 292 1 557 255 7 28 chr2 24435507 24435652 -226252202 - FLAM_A SINE Alu 0 142 1 623 210 20 2 chr2 24436643 24436829 -226251025 + L1M4 LINE L1 809 1170 -5372 * 3411 182 14 77 chr2 24436825 24437221 -226250633 + L1MA9 LINE L1 5121 5540 -772 1347 143 35 9 chr2 24437221 24437451 -226250403 - MER46A DNA MER2_type 0 236 1 3411 182 14 77 chr2 24437451 24438117 -226249737 + L1MA9 LINE L1 5540 6274 -38 2625 165 20 16 chr2 24438129 24438639 -226249215 + L1MB7 LINE L1 5315 5826 -358 263 370 101 0 chr2 24439966 24440085 -226247769 - L2 LINE L2 -5 3267 3137 24 53 0 0 chr2 24440421 24440459 -226247395 + AT_rich Low_complexity Low_complexity 1 38 0 245 329 0 0 chr2 24440866 24440936 -226246918 - L2 LINE L2 -962 2352 2283 1129 302 82 20 chr2 24441022 24441600 -226246254 + L2 LINE L2 2687 3299 -14 591 334 58 37 chr2 24441964 24442231 -226245623 - L2 LINE L2 -529 2785 2508 2614 48 0 0 chr2 24442231 24442540 -226245314 + AluY SINE Alu 1 309 -2 591 334 58 37 chr2 24442540 24442598 -226245256 - L2 LINE L2 -806 2508 2453 250 314 105 9 chr2 24442620 24442725 -226245129 - MIR SINE MIR -125 137 23 4522 142 20 10 chr2 24442759 24443553 -226244301 - L1MA5 LINE L1 -2 6298 5497 791 338 7 83 chr2 24445243 24445702 -226242152 + L2 LINE L2 2845 3268 -4 1232 126 42 42 chr2 24446129 24446344 -226241510 - MER20 DNA MER1_type -4 215 1 21 0 0 0 chr2 24446692 24446713 -226241141 + AT_rich Low_complexity Low_complexity 1 21 0 303 305 92 71 chr2 24446951 24447190 -226240664 - L1MC4a LINE L1 -1898 5910 5667 2036 128 3 7 chr2 24447202 24447498 -226240356 + AluSq SINE Alu 1 295 -18 732 313 123 22 chr2 24447542 24448199 -226239655 - L1M3 LINE L1 -623 5560 4815 225 350 67 8 chr2 24448554 24448674 -226239180 + L2 LINE L2 3137 3263 -9 194 279 45 63 chr2 24448800 24448911 -226238943 - L2 LINE L2 -8 3305 3197 188 379 64 38 chr2 24448908 24448995 -226238859 + L2 LINE L2 2707 2790 -524 * 596 248 98 49 chr2 24448995 24449210 -226238644 - MIR SINE MIR -1 261 31 1762 175 0 29 chr2 24449210 24449519 -226238335 - AluJo SINE Alu -12 300 1 596 248 98 49 chr2 24449519 24449549 -226238305 - MIR SINE MIR -231 31 4 188 379 64 38 chr2 24449549 24449725 -226238129 + L2 LINE L2 2790 2977 -337 2355 92 3 0 chr2 24450853 24451157 -226236697 + AluSc SINE Alu 1 305 -4 2326 69 0 10 chr2 24452410 24452738 -226235116 - AluY SINE Alu 0 325 1 31 44 0 0 chr2 24452741 24452786 -226235068 + AT_rich Low_complexity Low_complexity 1 45 0 1609 99 9 0 chr2 24453063 24453274 -226234580 - AluSg/x SINE Alu -16 296 84 516 288 58 5 chr2 24453334 24453539 -226234315 + L1MEd LINE L1 587 802 -5317 319 256 12 0 chr2 24453554 24453640 -226234214 + HAL1 LINE L1 146 232 -2275 655 265 191 23 chr2 24453661 24454102 -226233752 + HAL1 LINE L1 586 1100 -1407 1161 241 90 40 chr2 24454131 24454530 -226233324 + L2 LINE L2 2895 3313 0 1800 243 189 41 chr2 24454543 24455607 -226232247 + HAL1 LINE L1 1125 2345 -162 628 280 84 29 chr2 24455673 24455912 -226231942 - MLT1J LTR MaLR -132 379 128 4211 167 33 36 chr2 24456060 24456280 -226231574 + L1MB8 LINE L1 5256 5475 -703 1842 167 7 3 chr2 24456280 24456580 -226231274 + AluJo SINE Alu 1 301 -11 4211 167 33 36 chr2 24456580 24457280 -226230574 + L1MB8 LINE L1 5475 6173 -5 453 328 104 16 chr2 24457379 24457687 -226230167 + L1ME3A LINE L1 5555 5889 -281 648 163 0 0 chr2 24457702 24457800 -226230054 + MER2 DNA MER2_type 1 98 -247 715 220 0 8 chr2 24457800 24457932 -226229922 + FLAM_A SINE Alu 1 131 -2 987 147 82 52 chr2 24457953 24457997 -226229857 + MER2 DNA MER2_type 83 124 -221 2039 131 0 10 chr2 24457997 24458288 -226229566 - AluSx SINE Alu -24 288 1 987 147 82 52 chr2 24458288 24458474 -226229380 + MER2 DNA MER2_type 124 320 -25 1716 188 0 7 chr2 24458823 24459121 -226228733 - AluJo SINE Alu -16 296 1 291 337 10 10 chr2 24459551 24459649 -226228205 + MIR SINE MIR 53 150 -112 22 80 0 0 chr2 24459974 24460024 -226227830 + AT_rich Low_complexity Low_complexity 1 50 0 291 54 0 0 chr2 24460540 24460577 -226227277 + (TG)n Simple_repeat Simple_repeat 2 38 0 2392 61 0 3 chr2 24460635 24460930 -226226924 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 24460938 24460959 -226226895 + AT_rich Low_complexity Low_complexity 1 21 0 262 250 0 0 chr2 24461028 24461080 -226226774 - L2 LINE L2 0 3313 3262 203 321 119 0 chr2 24461082 24461166 -226226688 + MIR SINE MIR 156 249 -13 231 165 114 25 chr2 24461652 24461731 -226226123 - LTR67 LTR ERVL -15 542 457 2111 117 0 0 chr2 24462029 24462347 -226225507 + AluSx SINE Alu 3 320 0 211 310 10 40 chr2 24462363 24462463 -226225391 + L2 LINE L2 2217 2313 -1001 755 131 0 0 chr2 24462733 24462840 -226225014 + U6 snRNA snRNA 1 107 0 2656 186 55 10 chr2 24462843 24463441 -226224413 + L1PA13 LINE L1 1552 2176 -4611 245 125 25 0 chr2 24463441 24463481 -226224373 - MSTA LTR MaLR 0 428 388 2323 103 0 0 chr2 24463486 24463798 -226224056 + AluSx SINE Alu 1 312 0 2359 92 19 0 chr2 24463898 24464451 -226223403 - L1P4 LINE L1 -594 5580 5019 22 35 0 0 chr2 24465044 24465073 -226222781 + AT_rich Low_complexity Low_complexity 1 29 0 329 244 51 32 chr2 24465313 24465469 -226222385 - Charlie7 DNA MER1_type -229 2383 2225 1578 100 0 21 chr2 24465473 24465712 -226222142 - L1M2 LINE L1 -521 5770 5537 1576 189 97 120 chr2 24465742 24465756 -226222098 - Charlie7 DNA MER1_type -378 2234 2221 3044 121 43 15 chr2 24465756 24466294 -226221560 + L1MA8 LINE L1 5735 6287 -4 1576 189 97 120 chr2 24466294 24466517 -226221337 - Charlie7 DNA MER1_type -391 2221 1994 1776 136 4 0 chr2 24466517 24466767 -226221087 + AluSx SINE Alu 1 251 -61 1576 189 97 120 chr2 24466767 24467145 -226220709 - Charlie7 DNA MER1_type -618 1994 1637 2405 63 0 26 chr2 24467145 24467448 -226220406 - AluY SINE Alu -16 295 1 1576 189 97 120 chr2 24467448 24467623 -226220231 - Charlie7 DNA MER1_type -975 1637 1460 547 249 173 14 chr2 24467643 24467920 -226219934 - Charlie7 DNA MER1_type -2291 321 1 21 107 0 0 chr2 24468614 24468698 -226219156 + AT_rich Low_complexity Low_complexity 1 84 0 450 354 44 11 chr2 24468981 24469162 -226218692 + MER91A DNA MER1_type 9 195 -1 335 211 61 79 chr2 24471000 24471114 -226216740 + MIR SINE MIR 11 122 -140 2232 114 0 3 chr2 24471430 24471737 -226216117 - AluSq SINE Alu -7 306 1 6058 100 41 2 chr2 24472793 24472901 -226214953 - L1PA13 LINE L1 0 6163 6061 1866 118 55 71 chr2 24472901 24473282 -226214572 - THE1C LTR MaLR 0 375 1 6058 100 41 2 chr2 24473282 24474838 -226213016 - L1PA13 LINE L1 -102 6061 4469 1808 88 95 29 chr2 24474849 24475122 -226212732 - AluY SINE Alu -19 292 2 2251 118 3 0 chr2 24475805 24476111 -226211743 + AluSg SINE Alu 1 307 -3 196 74 0 0 chr2 24477423 24477450 -226210404 - L3 LINE CR1 -174 1403 1377 2225 65 27 7 chr2 24478292 24478586 -226209268 - AluY SINE Alu -11 300 1 224 232 0 0 chr2 24479071 24479127 -226208727 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 53 0 0 chr2 24479161 24479199 -226208655 + AT_rich Low_complexity Low_complexity 1 38 0 195 323 189 14 chr2 24479313 24479530 -226208324 - L2 LINE L2 -215 3098 2844 42 0 0 0 chr2 24480234 24480276 -226207578 + AT_rich Low_complexity Low_complexity 1 42 0 979 276 29 20 chr2 24482011 24482359 -226205495 + L1ME LINE L1 5414 5764 -406 24 53 0 0 chr2 24482462 24482500 -226205354 + AT_rich Low_complexity Low_complexity 1 38 0 222 37 0 0 chr2 24483613 24483640 -226204214 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 380 395 52 32 chr2 24483641 24483889 -226203965 - L2 LINE L2 -14 3258 3006 327 259 72 70 chr2 24484567 24484681 -226203173 - MER5B DNA MER1_type -60 129 2 206 283 71 61 chr2 24485387 24485461 -226202393 + MER5A DNA MER1_type 90 162 -27 2160 90 7 0 chr2 24485461 24485740 -226202114 + AluSp SINE Alu 1 281 -32 393 22 0 0 chr2 24485742 24485788 -226202066 + (TAA)n Simple_repeat Simple_repeat 1 46 0 206 283 71 61 chr2 24485788 24485809 -226202045 + MER5A DNA MER1_type 162 189 0 257 237 155 10 chr2 24486342 24486439 -226201415 + MER5A DNA MER1_type 3 113 -76 247 267 0 23 chr2 24486533 24486619 -226201235 - MER103 DNA DNA -44 122 39 1788 166 13 20 chr2 24486821 24487122 -226200732 + AluJb SINE Alu 1 299 -13 2014 132 7 0 chr2 24487327 24487623 -226200231 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr2 24488192 24488218 -226199636 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 269 173 0 0 chr2 24489906 24489958 -226197896 + L1MB7 LINE L1 6133 6184 0 2258 105 14 0 chr2 24490092 24490388 -226197466 + AluSx SINE Alu 1 300 -12 183 42 0 0 chr2 24491145 24491169 -226196685 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 26 50 0 0 chr2 24491873 24491913 -226195941 + AT_rich Low_complexity Low_complexity 1 40 0 192 326 101 59 chr2 24494361 24494701 -226193153 + L2 LINE L2 2824 3190 -82 754 231 177 9 chr2 24494772 24495314 -226192540 - L1ME LINE L1 -443 5719 5088 * 862 213 7 0 chr2 24495299 24495501 -226192353 + L1ME3 LINE L1 5666 5870 -300 2226 94 7 3 chr2 24495659 24495990 -226191864 - AluSx SINE Alu 0 332 1 369 281 68 14 chr2 24497082 24497228 -226190626 - MER103 DNA DNA -12 154 1 393 294 106 38 chr2 24497681 24497841 -226190013 + MIR3 SINE MIR 10 180 -28 667 263 136 77 chr2 24497978 24498546 -226189308 + HAL1 LINE L1 643 1176 -1331 2181 104 3 7 chr2 24498546 24498835 -226189019 + AluSq SINE Alu 1 288 -25 189 0 0 0 chr2 24498835 24498856 -226188998 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 667 263 136 77 chr2 24498856 24499130 -226188724 + HAL1 LINE L1 1175 1536 -971 2633 301 84 35 chr2 24499149 24500986 -226186868 + L1ME2 LINE L1 36 1962 -4434 2673 234 52 40 chr2 24501086 24501459 -226186395 + L1M4 LINE L1 4229 4596 -1550 2605 46 0 7 chr2 24501459 24501763 -226186091 + AluY SINE Alu 1 302 -9 2673 234 52 40 chr2 24501763 24502347 -226185507 + L1M4 LINE L1 4596 5198 -948 472 228 36 36 chr2 24502338 24502505 -226185349 + L1ME2 LINE L1 3547 3713 -2502 * 2638 145 123 29 chr2 24502496 24503411 -226184443 + L1MC2 LINE L1 5228 6237 -107 1808 213 9 58 chr2 24503392 24503504 -226184350 + L1ME2 LINE L1 5358 5474 -761 * 1862 146 27 10 chr2 24503504 24503798 -226184056 - AluSx SINE Alu -13 299 1 1808 213 9 58 chr2 24503798 24504150 -226183704 + L1ME2 LINE L1 5474 5799 -436 1406 109 43 137 chr2 24504152 24504481 -226183373 + AluYb8 SINE Alu 5 302 -16 1214 127 0 0 chr2 24504481 24504654 -226183200 + AluSg/x SINE Alu 135 307 -3 1225 196 117 50 chr2 24504658 24505060 -226182794 + L1ME2 LINE L1 5796 6224 -9 1447 259 125 35 chr2 24505074 24505944 -226181910 + HAL1 LINE L1 1554 2502 -5 955 126 13 13 chr2 24506585 24506744 -226181110 - THE1B-int LTR MaLR -1421 159 1 2116 136 48 23 chr2 24506746 24507099 -226180755 - THE1B LTR MaLR -2 362 1 2133 101 49 0 chr2 24507277 24507563 -226180291 + AluSx SINE Alu 1 300 -12 858 209 57 8 chr2 24507729 24507973 -226179881 - L1MEc LINE L1 -805 6136 5881 847 208 50 6 chr2 24507983 24508142 -226179712 + MER58A DNA MER1_type 2 167 0 4359 212 65 55 chr2 24508171 24508764 -226179090 - L1MEc LINE L1 -1066 5875 5290 329 0 24 0 chr2 24508764 24508805 -226179049 + (TA)n Simple_repeat Simple_repeat 2 43 0 2301 104 3 0 chr2 24508805 24509114 -226178740 - AluY SINE Alu -1 310 1 4359 212 65 55 chr2 24509114 24509671 -226178183 - L1MEc LINE L1 -1651 5290 4701 2238 98 7 0 chr2 24509671 24509966 -226177888 - AluSx SINE Alu -14 298 2 4359 212 65 55 chr2 24509966 24510381 -226177473 - L1MEc LINE L1 -2240 4701 4292 1008 254 115 5 chr2 24510385 24510786 -226177068 - L1MEc LINE L1 -2730 4211 3767 205 70 0 70 chr2 24510790 24510833 -226177021 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 447 122 11 44 chr2 24510833 24510923 -226176931 - LTR9 LTR ERV1 -86 526 440 2715 170 33 2 chr2 24510923 24511382 -226176472 - HUERS-P3 LTR ERV1 -8432 487 15 1093 96 5 70 chr2 24511397 24511584 -226176270 - LTR9 LTR ERV1 0 612 438 2078 242 79 17 chr2 24511587 24512444 -226175410 - L1MEc LINE L1 -3172 3769 2896 3669 89 32 2 chr2 24512452 24512978 -226174876 - L1PA10 LINE L1 -11 6157 5616 2312 94 12 0 chr2 24512978 24513298 -226174556 + L1PA10 LINE L1 5289 5612 -556 1112 249 74 115 chr2 24513301 24513401 -226174453 - L1MEc LINE L1 -4221 2901 2798 973 130 0 158 chr2 24513401 24513655 -226174199 - MER20 DNA MER1_type -4 215 2 1112 249 74 115 chr2 24513655 24514696 -226173158 - L1MEc LINE L1 -4324 2798 1807 2415 167 37 9 chr2 24514723 24514754 -226173100 - LTR45B LTR ERV1 -11 520 491 2875 53 3 3 chr2 24514754 24515109 -226172745 - THE1A LTR MaLR 0 355 1 2415 167 37 9 chr2 24515109 24515543 -226172311 - LTR45B LTR ERV1 -40 491 5 2760 239 40 94 chr2 24515665 24516955 -226170899 - L1MEc LINE L1 -5186 1237 17 207 333 95 0 chr2 24517014 24517098 -226170756 + L2 LINE L2 2966 3057 -215 566 261 162 25 chr2 24517432 24517796 -226170058 + L1MC4a LINE L1 5752 6165 -1643 1262 162 63 0 chr2 24518679 24518901 -226168953 + MER46A DNA MER2_type 1 236 0 344 326 105 22 chr2 24518975 24519156 -226168698 - L2 LINE L2 -1942 1372 1177 307 282 38 46 chr2 24520201 24520332 -226167522 - L1MEd LINE L1 -5018 1101 972 256 292 135 15 chr2 24520332 24520592 -226167262 - HAL1 LINE L1 -1389 1118 828 385 325 132 16 chr2 24521543 24521786 -226166068 - MARNA DNA Mariner -167 419 149 1339 135 9 22 chr2 24521975 24522197 -226165657 + AluJb SINE Alu 86 304 -8 1015 258 175 35 chr2 24522362 24522963 -226164891 - L1MC4a LINE L1 -1870 5938 5254 314 23 0 23 chr2 24523256 24523300 -226164554 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2021 139 72 12 chr2 24524440 24524801 -226163053 - MLT1B LTR MaLR -10 644 1 366 23 0 0 chr2 24524895 24524938 -226162916 + (TG)n Simple_repeat Simple_repeat 1 43 0 26 50 0 0 chr2 24524947 24524987 -226162867 + AT_rich Low_complexity Low_complexity 1 40 0 277 211 19 39 chr2 24525044 24525148 -226162706 - L1ME LINE L1 -325 5796 5695 2416 84 0 3 chr2 24526041 24526349 -226161505 + AluSq SINE Alu 1 307 -6 489 234 57 110 chr2 24528024 24528251 -226159603 - MER112 DNA MER1_type -42 218 4 2095 107 3 30 chr2 24529030 24529330 -226158524 - AluSc SINE Alu -17 292 1 318 287 197 47 chr2 24529744 24529930 -226157924 + HAL1 LINE L1 2176 2333 -174 2182 106 0 39 chr2 24529930 24530242 -226157612 + AluSx SINE Alu 1 300 -12 318 287 197 47 chr2 24530242 24530334 -226157520 + HAL1 LINE L1 2333 2496 -11 589 284 38 19 chr2 24530449 24530660 -226157194 + MIR SINE MIR 48 262 0 600 256 46 26 chr2 24531767 24531962 -226155892 - MLT1L LTR MaLR 0 615 417 192 158 0 0 chr2 24532093 24532131 -226155723 + A-rich Low_complexity Low_complexity 1 38 0 243 229 282 58 chr2 24532149 24532337 -226155517 - MLT1L LTR MaLR -380 235 6 2014 134 0 0 chr2 24532645 24532952 -226154902 + AluSx SINE Alu 1 307 0 2383 79 26 0 chr2 24533271 24533575 -226154279 + AluSq SINE Alu 1 312 -1 480 246 185 82 chr2 24533691 24533881 -226153973 + L1M4 LINE L1 4549 4718 -1428 1627 178 10 40 chr2 24533881 24534184 -226153670 + AluJo SINE Alu 1 294 -18 480 246 185 82 chr2 24534184 24534648 -226153206 + L1M4 LINE L1 4718 5270 -876 22 0 0 0 chr2 24534891 24534913 -226152941 + AT_rich Low_complexity Low_complexity 1 22 0 2316 101 3 0 chr2 24535308 24535605 -226152249 + AluSp SINE Alu 1 298 -15 222 354 71 24 chr2 24535766 24535893 -226151961 + L3 LINE CR1 16 148 -1429 268 359 94 52 chr2 24535893 24536039 -226151815 + L3 LINE CR1 1309 1466 -111 1117 178 23 5 chr2 24536039 24536253 -226151601 - MER20 DNA MER1_type 0 219 2 268 359 94 52 chr2 24536253 24536298 -226151556 + L3 LINE CR1 1466 1508 -69 202 284 98 114 chr2 24536917 24537276 -226150578 + L2 LINE L2 2915 3267 -5 23 101 0 0 chr2 24537638 24537717 -226150137 + AT_rich Low_complexity Low_complexity 1 79 0 495 215 16 8 chr2 24537981 24538102 -226149752 - MER103 DNA DNA -29 137 16 320 24 49 0 chr2 24538500 24538574 -226149280 - AluY SINE Alu 0 315 240 1739 146 53 19 chr2 24539625 24539948 -226147906 - MER7A DNA MER2_type 0 346 15 388 152 76 0 chr2 24540528 24540620 -226147234 - L1ME4a LINE L1 -2 6119 6021 294 293 197 14 chr2 24541652 24541799 -226146055 + MIR3 SINE MIR 9 182 -26 1614 141 0 23 chr2 24541825 24542088 -226145766 - AluSx SINE Alu -11 301 45 305 288 50 105 chr2 24542279 24542498 -226145356 - HAL1 LINE L1 -2296 211 5 518 116 74 11 chr2 24543806 24543901 -226143953 + L1MB5 LINE L1 5828 5928 -246 650 296 13 43 chr2 24544763 24544996 -226142858 + L2 LINE L2 987 1212 -2102 3167 242 130 33 chr2 24545001 24546433 -226141421 + L2 LINE L2 1746 3313 0 287 186 279 0 chr2 24546892 24546978 -226140876 - MER103 DNA DNA -53 113 4 2019 106 3 69 chr2 24547499 24547819 -226140035 + AluSp SINE Alu 1 299 -14 319 331 110 12 chr2 24548683 24548846 -226139008 - MER5A DNA MER1_type -4 185 7 314 284 95 0 chr2 24548944 24549039 -226138815 - L2 LINE L2 0 3272 3169 195 42 0 0 chr2 24549141 24549165 -226138689 + (TA)n Simple_repeat Simple_repeat 2 25 0 27 0 0 0 chr2 24549371 24549398 -226138456 + AT_rich Low_complexity Low_complexity 1 27 0 1977 178 0 0 chr2 24549873 24550177 -226137677 - AluJb SINE Alu -8 304 1 2105 126 0 26 chr2 24550247 24550557 -226137297 + AluSg SINE Alu 1 302 -8 4022 234 109 72 chr2 24551353 24551679 -226136175 - L1MEc LINE L1 -4399 1997 1685 2231 92 0 55 chr2 24551679 24552004 -226135850 - AluY SINE Alu -4 307 1 4022 234 109 72 chr2 24552004 24552388 -226135466 - L1MEc LINE L1 -4711 1685 1317 2307 121 0 0 chr2 24552388 24552695 -226135159 - AluSx SINE Alu -5 307 1 4022 234 109 72 chr2 24552695 24553875 -226133979 - L1MEc LINE L1 -5079 1317 35 836 181 93 10 chr2 24553903 24554108 -226133746 - L1ME3A LINE L1 -3 6167 5946 447 302 102 8 chr2 24554385 24554620 -226133234 + MIR SINE MIR 4 260 -2 1455 94 0 5 chr2 24554805 24554997 -226132857 + AluY SINE Alu 1 191 -120 2343 88 3 3 chr2 24555175 24555480 -226132374 - AluSq SINE Alu -8 305 1 697 263 40 9 chr2 24555606 24555830 -226132024 - MIR SINE MIR -12 250 20 188 319 99 11 chr2 24555970 24556061 -226131793 - L2 LINE L2 -211 3061 2963 1953 134 18 0 chr2 24556470 24556747 -226131107 + AluSx SINE Alu 13 294 -18 2311 69 24 10 chr2 24556780 24557071 -226130783 + AluY SINE Alu 1 295 -16 1982 141 3 10 chr2 24557455 24557753 -226130101 - AluSx SINE Alu -11 301 6 320 291 23 40 chr2 24558093 24558268 -226129586 + GA-rich Low_complexity Low_complexity 5 176 0 225 0 0 0 chr2 24560075 24560100 -226127754 + (A)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 24560771 24560796 -226127058 + AT_rich Low_complexity Low_complexity 1 25 0 2797 110 60 13 chr2 24562608 24563072 -226124782 - LTR19A LTR ERV1 0 486 1 185 286 16 0 chr2 24563766 24563829 -226124025 - L2 LINE L2 -56 3257 3194 2301 101 7 13 chr2 24564412 24564719 -226123135 + AluSq SINE Alu 1 305 -8 2394 93 0 0 chr2 24564719 24565019 -226122835 + AluSc SINE Alu 1 300 -9 1591 135 82 32 chr2 24565870 24566151 -226121703 - AluJo SINE Alu -17 295 1 198 226 42 48 chr2 24566353 24566447 -226121407 - MIR SINE MIR -65 143 98 2194 110 7 7 chr2 24566545 24566845 -226121009 + AluSx SINE Alu 3 302 -10 643 163 0 0 chr2 24566952 24567050 -226120804 + AluS SINE Alu 2 99 -214 2485 68 0 13 chr2 24567812 24568122 -226119732 + AluY SINE Alu 1 306 -5 1478 211 31 92 chr2 24568514 24568999 -226118855 - LTR9 LTR ERV1 0 612 227 2574 61 0 10 chr2 24568999 24569309 -226118545 - AluY SINE Alu -4 307 1 1478 211 31 92 chr2 24569309 24569523 -226118331 - LTR9 LTR ERV1 -385 227 1 212 0 36 0 chr2 24569525 24569553 -226118301 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1145 177 72 153 chr2 24569850 24570198 -226117656 - MER4C LTR ERV1 0 465 169 1940 145 54 3 chr2 24570198 24570494 -226117360 - AluSx SINE Alu -1 311 1 1145 177 72 153 chr2 24570494 24570648 -226117206 - MER4C LTR ERV1 -296 169 4 2118 105 0 45 chr2 24571039 24571352 -226116502 + AluSx SINE Alu 1 299 -13 2292 80 7 0 chr2 24571782 24572069 -226115785 + AluSg SINE Alu 1 289 -21 1336 260 58 7 chr2 24572139 24572908 -226114946 - L2 LINE L2 -5 3308 2455 635 149 98 11 chr2 24572911 24573085 -226114769 + AluSx SINE Alu 2 190 -122 2484 84 3 0 chr2 24573319 24573630 -226114224 - AluSp SINE Alu -1 312 1 684 332 82 12 chr2 24573711 24574115 -226113739 + L1M4 LINE L1 3798 4229 -1917 2248 98 10 3 chr2 24574928 24575223 -226112631 + AluSc SINE Alu 1 297 -12 2215 129 0 0 chr2 24575854 24576156 -226111698 + AluSx SINE Alu 2 303 -9 718 125 10 0 chr2 24576344 24576448 -226111406 + AluSq SINE Alu 1 105 -208 1863 151 112 19 chr2 24576448 24576860 -226110994 + LTR7 LTR ERV1 1 450 0 1459 117 0 9 chr2 24576860 24577073 -226110781 + AluSq SINE Alu 101 311 -2 505 182 36 9 chr2 24577357 24577467 -226110387 - MER5A DNA MER1_type -76 113 1 2066 107 0 35 chr2 24577690 24577839 -226110015 - AluSg SINE Alu -31 279 143 2411 55 24 3 chr2 24577839 24578128 -226109726 - AluSp SINE Alu -17 296 2 2066 107 0 35 chr2 24578128 24578267 -226109587 - AluSg SINE Alu -167 143 1 472 268 14 21 chr2 24578552 24578694 -226109160 - MIR SINE MIR -115 147 7 1801 107 53 17 chr2 24578751 24579050 -226108804 - L1PA12 LINE L1 0 6168 5859 2383 74 10 0 chr2 24579459 24579755 -226108099 - AluSq SINE Alu -14 299 1 956 128 0 0 chr2 24580047 24580180 -226107674 - AluSq/x SINE Alu -180 133 1 2288 87 0 7 chr2 24580654 24580952 -226106902 + AluSx SINE Alu 1 296 -16 805 208 7 7 chr2 24581285 24581439 -226106415 - FRAM SINE Alu -30 146 1 352 198 58 12 chr2 24581465 24581551 -226106303 + HsTC2 DNA Tc2 1808 1897 -1 2299 112 0 3 chr2 24582383 24582686 -226105168 - AluSx SINE Alu -10 302 1 428 258 225 0 chr2 24583103 24583312 -226104542 + MIR SINE MIR 2 257 -5 298 240 392 9 chr2 24583762 24583979 -226103875 - L1ME4a LINE L1 -2 6119 5820 322 294 38 31 chr2 24583988 24584148 -226103706 - L1ME4a LINE L1 -420 5701 5541 408 215 47 9 chr2 24585792 24585899 -226101955 + MIR SINE MIR 48 158 -104 385 278 46 0 chr2 24587237 24587345 -226100509 + L2 LINE L2 3197 3309 -4 2323 104 0 0 chr2 24587534 24587823 -226100031 + AluSg SINE Alu 1 289 -21 261 250 36 64 chr2 24587835 24587975 -226099879 - L2 LINE L2 -26 3287 3152 970 86 0 43 chr2 24587991 24588130 -226099724 + FLAM_C SINE Alu 1 133 0 899 261 82 117 chr2 24588457 24589406 -226098448 - L2 LINE L2 -557 2757 1801 1009 163 163 0 chr2 24589406 24589609 -226098245 + MER46A DNA MER2_type 1 236 0 899 261 82 117 chr2 24589609 24589679 -226098175 - L2 LINE L2 -1513 1801 1730 216 216 0 0 chr2 24589716 24589767 -226098087 + (TG)n Simple_repeat Simple_repeat 2 52 0 2405 63 21 0 chr2 24589935 24590222 -226097632 - AluY SINE Alu -18 293 1 2227 84 16 53 chr2 24590438 24590760 -226097094 - AluSx SINE Alu -2 310 1 2044 111 24 0 chr2 24591466 24591754 -226096100 + AluSx SINE Alu 1 295 -17 44698 41 2 0 chr2 24591786 24597933 -226089921 - L1PA4 LINE L1 0 6155 1 622 205 73 13 chr2 24598041 24598192 -226089662 - L1ME LINE L1 -517 5653 5494 229 254 30 15 chr2 24598573 24598640 -226089214 + CT-rich Low_complexity Low_complexity 3 70 0 2107 238 66 43 chr2 24598679 24599663 -226088191 - L1ME3 LINE L1 -102 6296 5289 2138 92 54 3 chr2 24599668 24599963 -226087891 - AluSx SINE Alu -2 310 1 1873 261 54 42 chr2 24599988 24601359 -226086495 - L1ME3 LINE L1 -2168 4214 2835 1133 140 0 0 chr2 24601360 24601524 -226086330 + AluSg/x SINE Alu 134 297 -15 371 215 134 132 chr2 24601526 24601759 -226086095 - L1ME3 LINE L1 -3542 2840 2609 814 169 0 22 chr2 24601759 24601895 -226085959 + FLAM_C SINE Alu 1 133 0 371 215 134 132 chr2 24601895 24601966 -226085888 - L1ME3 LINE L1 -3773 2609 2540 2308 92 0 0 chr2 24601966 24602269 -226085585 - AluSq SINE Alu -10 303 1 371 215 134 132 chr2 24602269 24602394 -226085460 - L1ME3 LINE L1 -3842 2540 2417 2097 128 0 3 chr2 24602394 24602706 -226085148 - AluSx SINE Alu -1 311 1 371 215 134 132 chr2 24602706 24602744 -226085110 - L1ME3 LINE L1 -3965 2417 2420 2256 73 3 23 chr2 24602744 24602911 -226084943 - AluSg SINE Alu -13 297 137 2505 64 0 0 chr2 24602911 24603222 -226084632 - AluY SINE Alu 0 311 1 2256 73 3 23 chr2 24603222 24603356 -226084498 - AluSg SINE Alu -173 137 2 371 215 134 132 chr2 24603356 24603433 -226084421 - L1ME3 LINE L1 -3961 2421 2346 409 297 100 46 chr2 24603448 24603930 -226083924 - L1ME3 LINE L1 -4576 1987 1480 571 292 95 58 chr2 24603931 24604381 -226083473 - L1ME3 LINE L1 -4958 1424 850 2218 102 10 0 chr2 24604425 24604730 -226083124 + AluSq SINE Alu 1 308 -5 251 233 0 0 chr2 24605359 24605419 -226082435 - L1ME3 LINE L1 -5974 398 339 258 56 0 0 chr2 24606078 24606114 -226081740 + (CA)n Simple_repeat Simple_repeat 1 36 0 1873 148 11 0 chr2 24606434 24606718 -226081136 + AluJo SINE Alu 15 301 -11 223 244 61 49 chr2 24606830 24606912 -226080942 - L2 LINE L2 -4 3268 3186 185 324 27 63 chr2 24607500 24607611 -226080243 - L2 LINE L2 -5 3308 3202 21 0 0 0 chr2 24609836 24609857 -226077997 + AT_rich Low_complexity Low_complexity 1 21 0 520 219 166 0 chr2 24614954 24615105 -226072749 - FAM SINE Alu -9 40 1 2085 118 0 10 chr2 24615152 24615456 -226072398 - AluSx SINE Alu -11 301 1 2369 63 3 3 chr2 24616068 24616367 -226071487 + AluSq SINE Alu 1 299 -14 21 36 0 0 chr2 24616793 24616821 -226071033 + GC_rich Low_complexity Low_complexity 1 28 0 1679 129 0 4 chr2 24616822 24617063 -226070791 - AluJb SINE Alu -38 274 35 1005 218 114 108 chr2 24617984 24618580 -226069274 - L1ME3A LINE L1 -315 5855 5260 350 329 72 13 chr2 24618580 24618732 -226069122 - MIR3 SINE MIR -2 206 46 321 326 155 11 chr2 24619798 24619985 -226067869 - MIR SINE MIR -48 214 1 236 352 56 66 chr2 24620008 24620204 -226067650 - L3 LINE CR1 -69 1508 1315 2269 107 0 0 chr2 24620468 24620777 -226067077 - AluSx SINE Alu -3 309 1 2467 45 7 7 chr2 24620873 24621181 -226066673 - AluY SINE Alu -2 309 2 489 270 56 60 chr2 24621418 24621505 -226066349 + MIR SINE MIR 20 106 -156 2283 78 7 0 chr2 24621505 24621799 -226066055 - AluSg SINE Alu -14 296 1 489 270 56 60 chr2 24621799 24621926 -226065928 + MIR SINE MIR 106 233 -29 245 200 0 104 chr2 24623276 24623401 -226064453 + G-rich Low_complexity Low_complexity 3 114 0 210 125 0 54 chr2 24623412 24623468 -226064386 + (CGGGGG)n Simple_repeat Simple_repeat 3 55 0 211 179 0 95 chr2 24623477 24623561 -226064293 + G-rich Low_complexity Low_complexity 2 77 0 1359 304 114 28 chr2 24624097 24625189 -226062665 + L2 LINE L2 2134 3313 0 265 202 64 55 chr2 24625235 24625344 -226062510 - MIR SINE MIR -60 148 39 2221 97 7 0 chr2 24627112 24627410 -226060444 + AluSx SINE Alu 1 300 -12 181 341 88 0 chr2 24627428 24627519 -226060335 + MIR3 SINE MIR 58 156 -52 190 283 18 62 chr2 24628168 24628281 -226059573 - MIR SINE MIR -58 150 43 983 242 127 25 chr2 24628524 24628917 -226058937 - L2 LINE L2 -696 2618 2186 591 66 0 0 chr2 24629354 24629430 -226058424 - MER30 DNA MER1_type -154 76 1 253 0 54 0 chr2 24629859 24629896 -226057958 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 197 77 0 0 chr2 24630222 24630248 -226057606 + MIR SINE MIR 63 88 -120 2198 93 3 0 chr2 24630400 24630689 -226057165 - AluSx SINE Alu -11 301 12 389 267 7 44 chr2 24631767 24631902 -226055952 - L2 LINE L2 0 3272 3143 258 306 90 0 chr2 24633409 24633520 -226054334 + MIR3 SINE MIR 37 157 -51 1031 211 24 10 chr2 24634651 24634695 -226053159 + MER58A DNA MER1_type 4 46 -2374 1459 179 0 0 chr2 24634695 24634935 -226052919 - AluJb SINE Alu -17 295 56 1031 211 24 10 chr2 24634935 24635098 -226052756 + MER58A DNA MER1_type 46 214 -10 1082 83 7 0 chr2 24636274 24636418 -226051436 + THE1A LTR MaLR 1 145 -210 558 297 100 39 chr2 24636637 24636967 -226050887 + L2 LINE L2 2941 3290 -23 355 259 36 1 chr2 24637142 24637262 -226050592 + MIR SINE MIR 34 154 -54 1003 151 6 6 chr2 24638049 24638215 -226049639 - AluJo SINE Alu -146 166 1 423 339 46 6 chr2 24638950 24639124 -226048730 + MIR3 SINE MIR 25 205 -3 30 0 0 0 chr2 24639292 24639322 -226048532 + AT_rich Low_complexity Low_complexity 1 30 0 1818 119 3 85 chr2 24639329 24639675 -226048179 + AluSq SINE Alu 1 320 0 198 0 0 0 chr2 24639674 24639696 -226048158 + (TG)n Simple_repeat Simple_repeat 1 22 0 1438 202 32 7 chr2 24639781 24640063 -226047791 - AluJb SINE Alu -21 291 3 1557 163 9 71 chr2 24640187 24640513 -226047341 + AluJo SINE Alu 5 310 -2 367 220 110 46 chr2 24641246 24641355 -226046499 + MER63 DNA MER1_type 4 745 -317 2371 115 0 0 chr2 24641658 24641970 -226045884 + AluSq SINE Alu 1 312 -1 576 0 0 0 chr2 24641970 24642034 -226045820 + (TA)n Simple_repeat Simple_repeat 2 65 0 222 170 0 21 chr2 24642403 24642450 -226045404 - L2 LINE L2 -4 3309 3264 2202 88 7 3 chr2 24642515 24642810 -226045044 + AluSx SINE Alu 1 296 -16 398 275 81 19 chr2 24642900 24643060 -226044794 - MIR SINE MIR -8 254 85 1302 241 72 41 chr2 24643075 24643511 -226044343 + MLT1C LTR MaLR 14 457 -10 245 299 89 59 chr2 24643585 24643856 -226043998 + L2 LINE L2 2804 3082 -190 186 43 0 0 chr2 24643943 24643966 -226043888 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 367 341 7 0 chr2 24644258 24644396 -226043458 + MLT1L LTR MaLR 470 608 -7 2206 64 41 7 chr2 24644492 24644787 -226043067 + AluY SINE Alu 1 305 -6 2030 122 7 3 chr2 24646753 24647056 -226040798 - AluSx SINE Alu 0 312 9 2116 112 7 0 chr2 24647172 24647467 -226040387 - AluSx SINE Alu -13 299 3 1989 131 0 3 chr2 24647560 24647851 -226040003 + AluSx SINE Alu 1 290 -22 277 196 0 0 chr2 24648698 24648749 -226039105 + L2 LINE L2 3262 3312 -1 521 329 38 35 chr2 24649380 24649693 -226038161 - LTR16C LTR ERVL -18 473 160 310 322 6 17 chr2 24650408 24650588 -226037266 + (TG)n Simple_repeat Simple_repeat 1 178 0 220 267 6 6 chr2 24650603 24650779 -226037075 + (TG)n Simple_repeat Simple_repeat 1 176 0 180 238 0 0 chr2 24650850 24650934 -226036920 + (TG)n Simple_repeat Simple_repeat 1 84 0 407 297 0 6 chr2 24650954 24651119 -226036735 + (TG)n Simple_repeat Simple_repeat 1 164 0 437 316 0 0 chr2 24651134 24651311 -226036543 + (TG)n Simple_repeat Simple_repeat 1 177 0 281 333 0 6 chr2 24651325 24651510 -226036344 + (TG)n Simple_repeat Simple_repeat 1 183 0 208 323 31 31 chr2 24652003 24652130 -226035724 - MIR SINE MIR -99 163 37 875 210 6 2 chr2 24652631 24652830 -226035024 - MLT1D LTR MaLR -327 178 2 2161 110 31 3 chr2 24653032 24653323 -226034531 - AluSx SINE Alu -13 299 1 528 298 44 0 chr2 24653635 24653816 -226034038 - MIR SINE MIR -64 198 10 2467 84 0 0 chr2 24654167 24654477 -226033377 + AluY SINE Alu 1 310 -1 2284 102 0 46 chr2 24655213 24655536 -226032318 + AluSx SINE Alu 1 308 -4 491 317 65 5 chr2 24656132 24656318 -226031536 - L3 LINE CR1 -137 1440 1244 2115 140 0 0 chr2 24656457 24656764 -226031090 - AluSx SINE Alu -3 309 3 197 262 48 29 chr2 24656846 24656949 -226030905 - L3 LINE CR1 -703 874 770 206 192 77 0 chr2 24657079 24657131 -226030723 - MIR SINE MIR -63 145 90 2162 107 6 50 chr2 24657748 24658066 -226029788 + AluSx SINE Alu 1 304 -8 558 0 0 0 chr2 24658466 24658528 -226029326 + (CA)n Simple_repeat Simple_repeat 2 63 0 1550 190 136 15 chr2 24659459 24659870 -226027984 - LOR1b LTR ERV1 0 461 1 267 306 73 16 chr2 24659988 24660112 -226027742 + MIR SINE MIR 47 177 -85 378 308 71 25 chr2 24660719 24660959 -226026895 - L1ME LINE L1 -299 5822 5572 250 103 0 0 chr2 24662846 24662885 -226024969 - MIR SINE MIR -19 243 205 203 253 23 58 chr2 24662922 24662961 -226024893 - MIR SINE MIR -133 129 90 3770 86 0 4 chr2 24662961 24663474 -226024380 - MER9 LTR ERVK 0 511 1 203 253 23 58 chr2 24663474 24663521 -226024333 - MIR SINE MIR -172 90 46 2550 89 14 0 chr2 24664128 24664478 -226023376 - THE1A LTR MaLR 0 355 1 11140 87 13 9 chr2 24664478 24664653 -226023201 - THE1A-int LTR MaLR 0 1580 1407 2263 132 0 0 chr2 24664653 24664964 -226022890 + AluSq SINE Alu 1 311 -2 11140 87 13 9 chr2 24664964 24666362 -226021492 - THE1A-int LTR MaLR -173 1407 1 988 26 0 0 chr2 24666362 24666479 -226021375 - THE1A LTR MaLR 0 355 239 846 157 124 6 chr2 24668192 24668370 -226019484 + MER3 DNA MER1_type 1 199 -10 299 189 0 27 chr2 24668409 24668483 -226019371 + MER117 DNA MER1_type 28 99 -98 239 200 20 0 chr2 24668703 24668753 -226019101 + L2 LINE L2 3184 3234 -38 1238 129 54 42 chr2 24668766 24669006 -226018848 - AluJo SINE Alu -6 306 64 398 289 94 13 chr2 24669058 24669207 -226018647 - Charlie8 DNA MER1_type -2241 176 16 2311 108 3 0 chr2 24671743 24672048 -226015806 + AluSx SINE Alu 1 306 -6 252 287 74 0 chr2 24672684 24672792 -226015062 - MIR SINE MIR -66 196 81 2608 44 0 31 chr2 24673038 24673359 -226014495 + AluY SINE Alu 1 311 0 452 139 70 0 chr2 24673373 24673459 -226014395 + L1MB5 LINE L1 6022 6113 -61 3117 73 20 7 chr2 24673882 24674320 -226013534 + MLT2A1 LTR ERVL 1 444 0 729 160 0 16 chr2 24674331 24674456 -226013398 - FLAM_C SINE Alu -15 128 6 3040 172 56 2 chr2 24674729 24674778 -226013076 + L1MB4 LINE L1 5524 5569 -611 2294 88 10 10 chr2 24674778 24675085 -226012769 + AluSx SINE Alu 1 307 -5 3040 172 56 2 chr2 24675085 24675647 -226012207 + L1MB4 LINE L1 5569 6168 -12 567 258 68 84 chr2 24675670 24675954 -226011900 + L1MC4a LINE L1 5600 5880 -1928 2052 121 11 0 chr2 24675954 24676226 -226011628 + AluSx SINE Alu 21 295 -17 567 258 68 84 chr2 24676226 24676251 -226011603 + L1MC4a LINE L1 5880 5904 -1904 414 0 0 0 chr2 24676261 24676307 -226011547 + (TG)n Simple_repeat Simple_repeat 1 46 0 363 226 47 74 chr2 24676478 24676668 -226011186 + L1ME LINE L1 82 266 -5853 1517 156 53 23 chr2 24677103 24677366 -226010488 + AluJo SINE Alu 42 312 0 624 287 91 33 chr2 24677418 24678074 -226009780 + L1ME LINE L1 792 1475 -4654 809 174 131 24 chr2 24678093 24678380 -226009474 + MSTD LTR MaLR 5 396 0 296 298 153 32 chr2 24678382 24678728 -226009126 + L1ME LINE L1 1533 1920 -4390 1365 263 113 57 chr2 24678802 24679163 -226008691 + L1ME LINE L1 2657 2996 -3133 1532 131 151 4 chr2 24679163 24679422 -226008432 + AluSg SINE Alu 1 297 -13 1365 263 113 57 chr2 24679422 24679506 -226008348 + L1ME LINE L1 2996 3074 -3055 2350 75 0 26 chr2 24679506 24679811 -226008043 + AluY SINE Alu 1 297 -14 1365 263 113 57 chr2 24679811 24680168 -226007686 + L1ME LINE L1 3074 3529 -2600 2118 143 7 0 chr2 24680168 24680475 -226007379 - AluJo SINE Alu -3 309 1 1365 263 113 57 chr2 24680475 24680666 -226007188 + L1ME LINE L1 3529 3708 -2421 2390 93 0 31 chr2 24680800 24681123 -226006731 + AluSq SINE Alu 1 313 0 275 215 101 0 chr2 24681137 24681216 -226006638 - MIR SINE MIR -67 141 55 274 278 62 10 chr2 24681604 24681701 -226006153 - MIR SINE MIR -70 192 91 199 336 136 0 chr2 24685422 24685562 -226002292 - MIR3 SINE MIR -7 201 43 1733 186 11 0 chr2 24686779 24687058 -226000796 - AluJo SINE Alu -30 282 1 190 270 124 0 chr2 24689689 24689778 -225998076 + L2 LINE L2 3179 3278 -35 2201 63 80 14 chr2 24689957 24690243 -225997611 + AluY SINE Alu 1 305 -6 208 365 112 18 chr2 24690370 24690540 -225997314 - MIR SINE MIR -55 207 22 2390 91 3 0 chr2 24691500 24691796 -225996058 + AluSx SINE Alu 1 297 -15 289 336 0 24 chr2 24692139 24692264 -225995590 - L2 LINE L2 -258 3055 2934 188 233 0 0 chr2 24692378 24692421 -225995433 + L2 LINE L2 3201 3243 -29 961 184 18 18 chr2 24692528 24692746 -225995108 + MER20 DNA MER1_type 2 219 0 2177 113 0 10 chr2 24693541 24693833 -225994021 + AluSx SINE Alu 1 289 -23 2388 93 0 0 chr2 24693834 24694134 -225993720 + AluSg SINE Alu 1 300 -10 187 276 233 9 chr2 24694950 24695066 -225992788 + MER5A DNA MER1_type 20 161 -28 2521 75 0 3 chr2 24695238 24695543 -225992311 - AluSx SINE Alu -8 304 1 290 336 188 0 chr2 24695971 24696120 -225991734 + MER5B DNA MER1_type 1 177 -1 196 354 164 22 chr2 24696365 24696732 -225991122 + L2 LINE L2 2554 2972 -342 303 292 125 8 chr2 24696867 24696987 -225990867 + L2 LINE L2 3139 3272 0 2202 133 25 5 chr2 24697776 24698144 -225989710 - THE1C LTR MaLR 0 375 1 241 321 148 46 chr2 24698438 24698675 -225989179 + MIR SINE MIR 2 262 0 2391 223 79 37 chr2 24699431 24699492 -225988362 - MER45B DNA AcHobo -306 734 677 2277 116 0 0 chr2 24699492 24699785 -225988069 + AluSx SINE Alu 1 293 -19 2391 223 79 37 chr2 24699785 24700316 -225987538 - MER45B DNA AcHobo -363 677 112 2218 91 3 14 chr2 24700316 24700625 -225987229 + AluSq SINE Alu 1 306 0 2391 223 79 37 chr2 24700625 24700648 -225987206 - MER45B DNA AcHobo -928 112 91 2657 251 69 10 chr2 24700693 24701566 -225986288 - L1MEc LINE L1 -2091 4124 3201 2165 102 17 3 chr2 24701639 24701934 -225985920 - AluSx SINE Alu -13 299 1 3300 185 40 3 chr2 24701957 24702579 -225985275 + Tigger7 DNA MER2_type 1 645 -88 1194 126 31 0 chr2 24702575 24702766 -225985088 + Tigger7 DNA MER2_type 2291 2487 0 * 867 219 90 47 chr2 24702766 24703019 -225984835 - L1MEc LINE L1 -3121 3094 2819 2462 57 3 14 chr2 24703019 24703316 -225984538 - AluY SINE Alu -17 294 1 867 219 90 47 chr2 24703316 24703427 -225984427 - L1MEc LINE L1 -3396 2819 2714 720 188 21 0 chr2 24703439 24703583 -225984271 - L1MEc LINE L1 -3675 2540 2394 207 0 0 0 chr2 24703585 24703608 -225984246 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 913 118 0 0 chr2 24703610 24703729 -225984125 - AluSq/x SINE Alu -194 119 1 230 254 0 0 chr2 24703733 24703796 -225984058 - L1MEc LINE L1 -3824 2391 2329 1163 166 0 21 chr2 24703797 24703990 -225983864 - AluJo SINE Alu -10 302 114 952 141 0 0 chr2 24703992 24704127 -225983727 + AluSg/x SINE Alu 137 271 -39 645 228 0 0 chr2 24704157 24704280 -225983574 - AluJo SINE Alu -187 125 3 2472 251 54 52 chr2 24704281 24704368 -225983486 - L1MEc LINE L1 -4020 2376 2291 1937 143 17 14 chr2 24704368 24704661 -225983193 - AluJb SINE Alu -10 302 9 2472 251 54 52 chr2 24704661 24704967 -225982887 - L1MEc LINE L1 -4105 2291 1987 1608 190 29 26 chr2 24704967 24705278 -225982576 + AluJo SINE Alu 1 312 0 2472 251 54 52 chr2 24705278 24705855 -225981999 - L1MEc LINE L1 -4409 1987 1399 2329 97 7 0 chr2 24705855 24706153 -225981701 - AluSg SINE Alu -10 300 1 2472 251 54 52 chr2 24706153 24706377 -225981477 - L1MEc LINE L1 -4997 1399 1177 1406 176 4 0 chr2 24706379 24706606 -225981248 - AluJb SINE Alu 0 312 85 756 232 31 80 chr2 24706611 24706868 -225980986 - L1MEc LINE L1 -5226 1170 943 2257 113 0 3 chr2 24706868 24707161 -225980693 + AluSg SINE Alu 1 292 -18 756 232 31 80 chr2 24707161 24707351 -225980503 - L1MEc LINE L1 -5453 943 745 693 308 94 38 chr2 24707367 24707847 -225980007 - L1MEc LINE L1 -5868 528 22 426 204 0 0 chr2 24707985 24708078 -225979776 + CT-rich Low_complexity Low_complexity 2 94 0 221 277 0 0 chr2 24708298 24708345 -225979509 + L2 LINE L2 3210 3256 -16 198 341 47 35 chr2 24708674 24708844 -225979010 + L2 LINE L2 2682 2853 -461 484 271 52 57 chr2 24710982 24711183 -225976671 + L3 LINE CR1 1127 1328 -249 2381 95 0 0 chr2 24711183 24711478 -225976376 + AluSq SINE Alu 11 305 -8 484 271 52 57 chr2 24711478 24711505 -225976349 + L3 LINE CR1 1328 1354 -223 791 192 0 0 chr2 24712058 24712188 -225975666 + FLAM_A SINE Alu 4 133 0 369 0 0 0 chr2 24712426 24712467 -225975387 + (TG)n Simple_repeat Simple_repeat 2 42 0 2084 143 0 0 chr2 24712595 24712889 -225974965 - AluJo SINE Alu -18 294 1 445 302 0 0 chr2 24712889 24713018 -225974836 - L1ME2 LINE L1 -47 6117 5989 1023 95 53 53 chr2 24713065 24713254 -225974600 + Tigger2a DNA MER2_type 2 190 -244 1694 135 0 4 chr2 24713256 24713500 -225974354 + AluJb SINE Alu 1 243 -69 1306 108 0 6 chr2 24713501 24713677 -225974177 + AluSq SINE Alu 129 303 -10 377 147 29 0 chr2 24713677 24713745 -225974109 + Tigger2a DNA MER2_type 365 434 0 289 205 128 0 chr2 24713811 24713889 -225973965 - L1ME1 LINE L1 -20 6146 6059 413 253 47 33 chr2 24713963 24714113 -225973741 + MIR SINE MIR 61 212 -50 413 148 12 0 chr2 24714641 24714722 -225973132 + GA-rich Low_complexity Low_complexity 1 82 0 1904 139 33 0 chr2 24714756 24715053 -225972801 + AluSx SINE Alu 1 306 0 2166 125 17 0 chr2 24715154 24715449 -225972405 - AluSx SINE Alu -12 300 1 2381 98 0 3 chr2 24715637 24715942 -225971912 - AluY SINE Alu -7 304 1 491 229 29 0 chr2 24716281 24716386 -225971468 - MIR SINE MIR -91 171 64 2126 100 7 0 chr2 24716552 24716831 -225971023 + AluSx SINE Alu 20 300 -12 2114 119 44 0 chr2 24717357 24717651 -225970203 + AluSq SINE Alu 1 307 -6 2237 126 3 0 chr2 24718221 24718531 -225969323 + AluSx SINE Alu 1 311 -1 2404 105 0 3 chr2 24718548 24718854 -225969000 + AluSp SINE Alu 1 305 -8 373 284 26 110 chr2 24719402 24719666 -225968188 + L2 LINE L2 2101 2342 -972 352 106 40 60 chr2 24720461 24720536 -225967318 + MLT1G LTR MaLR 241 324 -271 312 198 128 0 chr2 24720621 24720707 -225967147 + MLT1G1 LTR MaLR 396 492 -63 1196 164 43 5 chr2 24720710 24720918 -225966936 - AluJb SINE Alu -10 302 87 351 212 0 0 chr2 24720921 24720987 -225966867 + MLT1G1 LTR MaLR 530 595 0 2016 112 51 7 chr2 24721160 24721454 -225966400 - AluSc SINE Alu -2 307 1 1480 166 36 62 chr2 24721724 24721876 -225965978 - AluJo SINE Alu -4 308 154 2108 106 41 10 chr2 24721876 24722168 -225965686 + AluSx SINE Alu 3 303 -9 1480 166 36 62 chr2 24722168 24722214 -225965640 - AluJo SINE Alu -158 154 108 189 107 0 0 chr2 24722214 24722242 -225965612 + (TG)n Simple_repeat Simple_repeat 1 28 0 1480 166 36 62 chr2 24722242 24722349 -225965505 - AluJo SINE Alu -204 108 10 525 267 8 15 chr2 24722383 24722514 -225965340 + MIR SINE MIR 22 151 -111 870 158 7 27 chr2 24722691 24722837 -225965017 + FLAM_C SINE Alu 1 143 0 540 81 0 0 chr2 24723061 24723135 -225964719 + (TG)n Simple_repeat Simple_repeat 1 74 0 263 231 0 0 chr2 24724066 24724118 -225963736 + MIR SINE MIR 103 154 -108 301 228 27 87 chr2 24724791 24724909 -225962945 + MIR3 SINE MIR 24 133 -75 2207 113 0 7 chr2 24724909 24725202 -225962652 + AluSq SINE Alu 10 300 -13 301 228 27 87 chr2 24725202 24725232 -225962622 + MIR3 SINE MIR 133 163 -45 2297 108 7 0 chr2 24726045 24726350 -225961504 - AluSx SINE Alu -5 307 1 2406 86 0 0 chr2 24726913 24727204 -225960650 + AluSc SINE Alu 3 293 -16 426 288 69 6 chr2 24727406 24727566 -225960288 + MIR3 SINE MIR 24 193 -15 217 211 83 110 chr2 24728319 24728428 -225959426 - MIR SINE MIR -44 218 113 23 54 0 0 chr2 24730284 24730321 -225957533 + GC_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 24730492 24730537 -225957317 + GC_rich Low_complexity Low_complexity 1 45 0 23 101 0 0 chr2 24730709 24730788 -225957066 + GC_rich Low_complexity Low_complexity 1 79 0 954 122 0 27 chr2 24730902 24731049 -225956805 + AluJb SINE Alu 170 312 0 2493 85 0 0 chr2 24731062 24731368 -225956486 + AluSc SINE Alu 1 306 -3 832 110 0 0 chr2 24731534 24731643 -225956211 + AluSp/q SINE Alu 189 297 -16 239 0 0 31 chr2 24731643 24731675 -225956179 + (TA)n Simple_repeat Simple_repeat 1 31 0 504 269 69 7 chr2 24731768 24731826 -225956028 + MIR SINE MIR 1 54 -208 1735 162 7 4 chr2 24731826 24732097 -225955757 - AluJb SINE Alu -39 273 2 504 269 69 7 chr2 24732097 24732183 -225955671 + MIR SINE MIR 54 154 -108 2346 95 3 0 chr2 24732275 24732571 -225955283 - AluSc SINE Alu -12 297 1 2365 97 6 3 chr2 24733204 24733515 -225954339 - AluSq SINE Alu -1 312 1 2017 147 0 16 chr2 24733989 24734303 -225953551 - AluSx SINE Alu -3 309 1 648 192 8 8 chr2 24734539 24734664 -225953190 + L2 LINE L2 3189 3313 0 2214 92 0 3 chr2 24734675 24734959 -225952895 - AluSg SINE Alu -27 283 1 2258 95 0 13 chr2 24735679 24735983 -225951871 + AluSg SINE Alu 9 308 -2 186 43 0 0 chr2 24736901 24736924 -225950930 + (T)n Simple_repeat Simple_repeat 1 23 0 832 196 0 0 chr2 24739224 24739357 -225948497 - FLAM_A SINE Alu 0 133 1 259 231 0 0 chr2 24740571 24740623 -225947231 + L2 LINE L2 3221 3272 0 580 249 50 20 chr2 24742445 24742646 -225945208 + L1M4 LINE L1 4572 4778 -1368 2311 119 0 3 chr2 24743114 24743426 -225944428 + AluSx SINE Alu 1 311 -1 428 306 45 0 chr2 24743498 24743651 -225944203 + MIR3 SINE MIR 47 208 0 28 61 0 0 chr2 24744244 24744293 -225943561 + AT_rich Low_complexity Low_complexity 1 49 0 1961 132 3 20 chr2 24744377 24744673 -225943181 + AluJb SINE Alu 1 291 -21 960 271 82 66 chr2 24744689 24745471 -225942383 - L1ME4a LINE L1 -14 6107 5313 837 147 23 0 chr2 24745471 24745600 -225942254 - FLAM_A SINE Alu -1 132 1 960 271 82 66 chr2 24745600 24745619 -225942235 - L1ME4a LINE L1 -808 5313 5296 355 353 186 11 chr2 24746416 24746776 -225941078 + L1MEc LINE L1 474 896 -5929 2467 67 3 0 chr2 24747206 24747503 -225940351 + AluY SINE Alu 1 298 -13 1430 276 81 40 chr2 24747517 24748349 -225939505 + L1MEc LINE L1 1014 2011 -4814 389 228 83 62 chr2 24749225 24749370 -225938484 - MER5A DNA MER1_type -6 183 36 231 263 0 0 chr2 24749407 24749464 -225938390 + CT-rich Low_complexity Low_complexity 2 58 0 1145 184 61 5 chr2 24751030 24751242 -225936612 + MIR SINE MIR 2 225 -37 348 318 136 34 chr2 24751670 24752111 -225935743 + L2 LINE L2 1934 2419 -895 239 263 141 0 chr2 24753829 24753928 -225933926 - L1ME4a LINE L1 -43 6078 5966 2267 68 10 7 chr2 24753988 24754284 -225933570 + AluY SINE Alu 1 297 -14 324 178 78 101 chr2 24754405 24754534 -225933320 + MLT1K LTR MaLR 460 585 -3 589 291 118 0 chr2 24755604 24755807 -225932047 + MIR SINE MIR 35 261 -1 1675 124 10 58 chr2 24755986 24756277 -225931577 + AluJb SINE Alu 1 277 -35 372 214 71 20 chr2 24756362 24756460 -225931394 - MIR SINE MIR -43 219 117 455 241 73 29 chr2 24756819 24756956 -225930898 - MIR SINE MIR -89 173 31 776 205 54 11 chr2 24757066 24757251 -225930603 + L1MD2 LINE L1 6165 6357 -2 1270 154 66 4 chr2 24757264 24757537 -225930317 + AluSx SINE Alu 4 293 -19 13037 116 31 14 chr2 24757793 24759821 -225928033 + Tigger1 DNA MER2_type 89 2151 -267 1221 181 14 113 chr2 24759823 24759919 -225927935 + L1M4 LINE L1 2790 2894 -3252 203 79 26 0 chr2 24759919 24759957 -225927897 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1221 181 14 113 chr2 24759957 24759974 -225927880 + L1M4 LINE L1 2894 2911 -3235 1961 113 18 0 chr2 24759974 24760257 -225927597 - AluSx SINE Alu -24 288 1 1221 181 14 113 chr2 24760257 24760567 -225927287 + L1M4 LINE L1 2911 3172 -2974 1832 125 0 48 chr2 24761289 24761600 -225926254 - AluSp SINE Alu -17 296 1 339 293 134 21 chr2 24762157 24762396 -225925458 + L1ME LINE L1 5366 5631 -490 1253 73 12 0 chr2 24762484 24762649 -225925205 - LTR13 LTR ERVK 0 1007 841 * 1557 54 64 0 chr2 24762641 24762844 -225925010 - LTR13 LTR ERVK -791 216 1 241 286 59 8 chr2 24762988 24763107 -225924747 + L1ME LINE L1 5773 5897 -224 1728 161 14 0 chr2 24763119 24763411 -225924443 + AluJo SINE Alu 1 296 -16 2127 109 6 10 chr2 24763633 24763945 -225923909 + AluSx SINE Alu 1 311 -1 259 294 198 8 chr2 24764023 24764149 -225923705 - MIR SINE MIR -93 169 20 24 32 0 0 chr2 24764636 24764667 -225923187 + GC_rich Low_complexity Low_complexity 1 31 0 209 227 34 23 chr2 24764808 24764896 -225922958 + C-rich Low_complexity Low_complexity 3 91 0 29 0 0 0 chr2 24765003 24765032 -225922822 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 24766776 24766797 -225921057 + AT_rich Low_complexity Low_complexity 1 21 0 2235 87 0 3 chr2 24768167 24768465 -225919389 + AluSq SINE Alu 1 297 -16 2181 98 3 0 chr2 24768771 24769068 -225918786 + AluSx SINE Alu 1 298 -14 2491 27 7 0 chr2 24769174 24769469 -225918385 - AluY SINE Alu -14 297 1 2082 106 11 0 chr2 24769951 24770235 -225917619 - AluSx SINE Alu -25 287 1 317 288 144 19 chr2 24770566 24770726 -225917128 - L2 LINE L2 -11 3302 3123 299 73 0 24 chr2 24770743 24770784 -225917070 + MLT1K LTR MaLR 547 586 -2 2023 125 7 0 chr2 24771140 24771436 -225916418 - AluSg SINE Alu -12 298 1 293 268 21 52 chr2 24771624 24771721 -225916133 + L2 LINE L2 3218 3311 -2 2195 93 3 6 chr2 24772098 24772409 -225915445 + AluSx SINE Alu 1 310 -2 2215 68 0 4 chr2 24772629 24772938 -225914916 - AluSc SINE Alu 0 308 1 1881 136 14 0 chr2 24772942 24773229 -225914625 - AluSx SINE Alu -21 291 1 23 0 0 0 chr2 24773327 24773350 -225914504 + AT_rich Low_complexity Low_complexity 1 23 0 236 324 93 19 chr2 24773984 24774092 -225913762 + MIR SINE MIR 25 140 -122 1208 108 48 0 chr2 24774358 24774544 -225913310 - AluY SINE Alu -116 195 1 725 117 9 0 chr2 24774552 24774663 -225913191 - FLAM_C SINE Alu 0 143 32 331 187 133 0 chr2 24774664 24774739 -225913115 - L1MA9 LINE L1 -69 6243 6159 1305 156 12 56 chr2 24774772 24775022 -225912832 + L1MA9 LINE L1 5712 5950 -362 1983 108 3 26 chr2 24775022 24775327 -225912527 + AluSq SINE Alu 1 298 -15 386 288 100 59 chr2 24775608 24775778 -225912076 + MIR3 SINE MIR 13 189 -19 341 268 29 87 chr2 24776074 24776150 -225911704 - L1ME4a LINE L1 -1 6120 6054 2011 114 0 39 chr2 24776150 24776457 -225911397 - AluSx SINE Alu -17 295 1 341 268 29 87 chr2 24776457 24776518 -225911336 - L1ME4a LINE L1 -67 6054 5991 1806 143 14 0 chr2 24776827 24777114 -225910740 + AluSx SINE Alu 1 291 -21 642 121 32 8 chr2 24777125 24777249 -225910605 + GA-rich Low_complexity Low_complexity 2 128 0 1577 147 33 23 chr2 24777261 24777568 -225910286 + AluJb SINE Alu 1 310 -2 627 133 10 0 chr2 24778169 24778267 -225909587 + AluJb SINE Alu 200 298 -14 320 253 0 74 chr2 24778543 24778638 -225909216 + L1ME4a LINE L1 6033 6120 -1 243 0 0 0 chr2 24778685 24778712 -225909142 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 927 85 23 0 chr2 24778712 24778841 -225909013 - AluSc SINE Alu -177 132 1 276 262 60 27 chr2 24778900 24779049 -225908805 - L1M4 LINE L1 -1218 4928 4775 27 0 0 0 chr2 24779066 24779093 -225908761 + AT_rich Low_complexity Low_complexity 1 27 0 291 167 36 83 chr2 24779593 24779677 -225908177 - U14 snRNA snRNA -7 80 1 2039 99 20 7 chr2 24779684 24779978 -225907876 - AluSx SINE Alu -14 298 1 469 283 94 50 chr2 24780014 24780618 -225907236 - L1M4 LINE L1 -1430 4716 4086 1953 108 34 7 chr2 24780660 24780956 -225906898 - AluSx SINE Alu -8 304 1 323 211 0 0 chr2 24781079 24781136 -225906718 - L2 LINE L2 -7 3265 3209 298 261 68 11 chr2 24781179 24781267 -225906587 + MIR SINE MIR 18 110 -98 2311 54 0 57 chr2 24783418 24783734 -225904120 - AluY SINE Alu -13 298 1 382 311 42 42 chr2 24783740 24783907 -225903947 - L1ME4a LINE L1 -298 5823 5657 2200 93 0 13 chr2 24784156 24784469 -225903385 - AluSg1 SINE Alu 0 309 1 2272 92 0 0 chr2 24784526 24784821 -225903033 - AluSc SINE Alu -14 295 1 2260 97 6 0 chr2 24785762 24786073 -225901781 + AluSp SINE Alu 1 313 0 22 0 0 0 chr2 24786235 24786257 -225901597 + AT_rich Low_complexity Low_complexity 1 22 0 2121 124 10 0 chr2 24786258 24786564 -225901290 + AluSx SINE Alu 1 309 -3 196 354 56 45 chr2 24787081 24787259 -225900595 + L2 LINE L2 2541 2720 -594 304 309 39 67 chr2 24787261 24787340 -225900514 + HAL1 LINE L1 10 90 -2417 2428 53 3 3 chr2 24787340 24787640 -225900214 + AluY SINE Alu 1 300 -11 304 309 39 67 chr2 24787640 24787738 -225900116 + HAL1 LINE L1 90 182 -2325 600 236 200 5 chr2 24787739 24787959 -225899895 + HAL1 LINE L1 1697 1959 -548 685 124 152 0 chr2 24787961 24788066 -225899788 + AluJ SINE Alu 3 123 -189 1768 118 4 8 chr2 24788067 24788360 -225899494 - AluSx SINE Alu 0 315 24 767 108 0 0 chr2 24788360 24788471 -225899383 + Tigger5 DNA MER2_type 2069 2179 -144 1133 146 0 11 chr2 24788480 24788665 -225899189 + AluJ SINE Alu 108 290 -22 346 259 127 19 chr2 24788668 24788826 -225899028 + HAL1 LINE L1 1947 2121 -386 216 0 0 0 chr2 24789061 24789085 -225898769 + (T)n Simple_repeat Simple_repeat 1 24 0 1349 136 5 5 chr2 24789213 24789433 -225898421 + AluSq SINE Alu 70 289 -24 207 0 0 0 chr2 24789436 24789459 -225898395 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 259 111 0 0 chr2 24789459 24789495 -225898359 - AluSx SINE Alu -262 37 2 215 276 171 0 chr2 24789505 24789581 -225898273 + L2 LINE L2 3225 3313 0 190 139 23 70 chr2 24789692 24789724 -225898130 - L2 LINE L2 -19 3294 3263 2234 87 0 10 chr2 24789724 24790033 -225897821 - AluSg SINE Alu -4 306 1 697 266 79 0 chr2 24790080 24790283 -225897571 - MIR SINE MIR -43 219 1 2137 71 0 18 chr2 24790853 24791134 -225896720 + AluSc SINE Alu 1 276 -33 187 27 27 54 chr2 24791134 24791171 -225896683 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 217 308 45 58 chr2 24791336 24791492 -225896362 + MIR SINE MIR 51 204 -58 1799 125 53 4 chr2 24791557 24791838 -225896016 - AluSx SINE Alu -17 295 1 207 278 37 0 chr2 24792333 24792387 -225895467 - MIR SINE MIR -77 131 76 438 273 18 0 chr2 24794139 24794249 -225893605 + MIR3 SINE MIR 74 185 -23 221 274 0 0 chr2 24794348 24794399 -225893455 + MIR SINE MIR 100 150 -112 201 208 21 21 chr2 24794587 24794635 -225893219 - MIR SINE MIR -147 115 68 2228 84 7 10 chr2 24794730 24795029 -225892825 + AluSp SINE Alu 1 298 -15 4377 159 17 77 chr2 24795036 24795265 -225892589 + L1MB3 LINE L1 5135 5376 -807 1964 156 0 0 chr2 24795265 24795572 -225892282 + 7SLRNA srpRNA srpRNA 5 311 -9 4377 159 17 77 chr2 24795572 24795707 -225892147 + L1MB3 LINE L1 5376 5517 -666 1981 121 0 0 chr2 24795707 24795989 -225891865 + AluSx SINE Alu 1 282 -30 4377 159 17 77 chr2 24795989 24796345 -225891509 + L1MB3 LINE L1 5517 5776 -407 1628 126 108 0 chr2 24796345 24796614 -225891240 - AluSx SINE Alu -14 298 1 4377 159 17 77 chr2 24796614 24796941 -225890913 + L1MB3 LINE L1 5776 6121 -62 1352 79 11 5 chr2 24796943 24797132 -225890722 + AluSp SINE Alu 120 309 -4 2214 81 3 17 chr2 24797142 24797440 -225890414 + AluSg SINE Alu 1 294 -16 22 56 0 0 chr2 24797458 24797494 -225890360 + AT_rich Low_complexity Low_complexity 1 36 0 2278 80 0 3 chr2 24797869 24798181 -225889673 + AluY SINE Alu 1 311 0 1846 116 46 0 chr2 24798358 24798643 -225889211 - AluSx SINE Alu -14 298 1 2257 85 0 7 chr2 24798720 24799026 -225888828 - AluSx SINE Alu -8 304 1 354 226 49 0 chr2 24799102 24799204 -225888650 + L1ME4a LINE L1 5977 6083 -38 23 0 0 0 chr2 24799309 24799332 -225888522 + AT_rich Low_complexity Low_complexity 1 23 0 715 183 109 30 chr2 24799476 24799678 -225888176 + L1ME2 LINE L1 5938 6155 -9 2139 78 3 50 chr2 24800149 24800470 -225887384 - AluSx SINE Alu -6 306 1 752 257 88 9 chr2 24800705 24800931 -225886923 + MIR SINE MIR 13 256 -6 1631 164 0 33 chr2 24802417 24802721 -225885133 - AluJo SINE Alu -18 294 1 209 356 45 23 chr2 24803618 24803795 -225884059 + L2 LINE L2 2830 3010 -262 943 172 92 6 chr2 24804260 24804434 -225883420 + MER3 DNA MER1_type 21 209 0 283 303 34 46 chr2 24804603 24804651 -225883203 - L1MC4a LINE L1 -1884 5924 5877 1864 89 7 4 chr2 24804651 24804920 -225882934 - AluY SINE Alu 0 311 42 283 303 34 46 chr2 24804920 24805046 -225882808 - L1MC4a LINE L1 -1931 5877 5752 843 99 7 84 chr2 24805066 24805208 -225882646 - FLAM_C SINE Alu -2 131 1 2350 81 0 0 chr2 24805846 24806156 -225881698 - AluY SINE Alu 0 311 2 2103 69 94 0 chr2 24806159 24806436 -225881418 - AluSx SINE Alu -9 303 1 2365 147 21 95 chr2 24806628 24806932 -225880922 - MER66B LTR ERV1 0 486 236 2202 82 0 3 chr2 24806932 24807225 -225880629 - AluY SINE Alu -19 292 1 2365 147 21 95 chr2 24807225 24807445 -225880409 - MER66B LTR ERV1 -250 236 1 2104 113 0 3 chr2 24807487 24807787 -225880067 - AluSx SINE Alu -9 303 5 2334 57 0 0 chr2 24808184 24808488 -225879366 - AluY SINE Alu 0 304 1 2265 94 0 0 chr2 24808488 24808787 -225879067 - AluSg SINE Alu -11 299 1 1912 162 0 3 chr2 24809500 24809808 -225878046 - AluJb SINE Alu -4 308 2 423 276 71 34 chr2 24810108 24810347 -225877507 + L1ME4a LINE L1 5595 5842 -279 182 274 263 11 chr2 24810446 24810541 -225877313 - MIR SINE MIR -71 137 19 1867 132 35 0 chr2 24810588 24810875 -225876979 - AluJb SINE Alu -15 297 1 232 338 100 38 chr2 24810986 24811326 -225876528 + L2 LINE L2 2934 3294 -19 2083 100 11 0 chr2 24811511 24811792 -225876062 + AluSx SINE Alu 1 284 -28 2137 117 0 0 chr2 24812234 24812543 -225875311 - AluSq SINE Alu -4 309 1 1558 176 30 0 chr2 24813026 24813322 -225874532 + AluJb SINE Alu 3 307 -5 496 253 28 45 chr2 24813485 24813663 -225874191 - L1MC4 LINE L1 -4 8038 7864 1407 119 0 0 chr2 24813710 24813904 -225873950 + AluSq SINE Alu 11 204 -109 303 238 36 12 chr2 24813905 24813989 -225873865 + L1MC4 LINE L1 6624 6709 -1333 930 138 0 0 chr2 24813997 24814127 -225873727 - FLAM_C SINE Alu -3 130 1 373 228 79 9 chr2 24814131 24814245 -225873609 - L1MC4 LINE L1 -181 7861 7740 705 240 60 56 chr2 24814258 24814491 -225873363 + MER119 DNA MER1_type 11 244 -339 2109 82 0 4 chr2 24814495 24814802 -225873052 + AluY SINE Alu 1 306 0 225 261 0 0 chr2 24814803 24814849 -225873005 + MER119 DNA MER1_type 537 582 -1 4703 214 139 56 chr2 24814849 24815124 -225872730 - L1MC4a LINE L1 -154 7654 7403 1947 136 0 7 chr2 24815124 24815418 -225872436 + AluSx SINE Alu 1 292 -20 4703 214 139 56 chr2 24815418 24815907 -225871947 - L1MC4a LINE L1 -405 7403 6956 1822 106 50 20 chr2 24815907 24816209 -225871645 - AluSx SINE Alu -1 311 1 4703 214 139 56 chr2 24816209 24817365 -225870489 - L1MC4a LINE L1 -852 6956 5573 715 180 0 11 chr2 24817503 24817739 -225870115 + AluJo SINE Alu 2 286 -26 872 150 0 0 chr2 24817816 24817949 -225869905 - FLAM_C SINE Alu 0 133 1 367 221 195 21 chr2 24817950 24818140 -225869714 - L1MC5 LINE L1 -51 7910 7688 2769 208 40 32 chr2 24818169 24818641 -225869213 + MLT1E3 LTR MaLR 1 468 -156 2128 106 3 0 chr2 24818641 24818933 -225868921 - AluSx SINE Alu -19 293 1 1676 163 28 0 chr2 24818936 24819225 -225868629 - AluJo SINE Alu -15 297 1 2769 208 40 32 chr2 24819225 24819367 -225868487 + MLT1E3 LTR MaLR 469 624 0 1693 206 0 0 chr2 24819520 24819830 -225868024 + AluSx SINE Alu 1 310 -2 202 111 0 44 chr2 24819835 24819880 -225867974 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 246 295 0 11 chr2 24819880 24819975 -225867879 + L1ME LINE L1 91 184 -5886 1343 238 92 37 chr2 24820138 24820196 -225867658 + MLT1G1 LTR MaLR 1 54 -541 1715 132 97 3 chr2 24820196 24820506 -225867348 - L1MB3 LINE L1 0 6183 5845 1343 238 92 37 chr2 24820506 24820829 -225867025 + MLT1G1 LTR MaLR 54 403 -192 241 323 86 0 chr2 24821020 24821113 -225866741 + L2 LINE L2 2880 2980 -333 329 193 34 0 chr2 24821234 24821322 -225866532 + GA-rich Low_complexity Low_complexity 5 95 0 241 305 133 29 chr2 24821322 24821427 -225866427 + L3 LINE CR1 586 701 -876 1526 188 14 0 chr2 24821428 24821720 -225866134 + AluJb SINE Alu 1 296 -16 1285 203 11 8 chr2 24821757 24822023 -225865831 - AluJo SINE Alu -11 301 35 2151 125 0 0 chr2 24822066 24822378 -225865476 - AluSx SINE Alu 0 312 1 1297 244 35 20 chr2 24822491 24822811 -225865043 - L1ME LINE L1 -507 5663 5334 1758 133 31 7 chr2 24822811 24823097 -225864757 + AluJo SINE Alu 6 298 -14 1297 244 35 20 chr2 24823097 24823178 -225864676 - L1ME LINE L1 -836 5334 5256 1496 234 84 24 chr2 24823196 24823666 -225864188 + L1ME3A LINE L1 5671 6165 -5 312 183 14 28 chr2 24824778 24824849 -225863005 - MER116 DNA Mariner -3 77 8 493 383 24 0 chr2 24825191 24825358 -225862496 + L2 LINE L2 3102 3272 0 1127 148 31 45 chr2 24825544 24825767 -225862087 + AluJo SINE Alu 1 220 -92 372 94 0 0 chr2 24825767 24825820 -225862034 + AluJo SINE Alu 86 138 -164 1294 169 20 128 chr2 24825820 24826163 -225861691 + AluYb8 SINE Alu 3 308 0 835 211 0 6 chr2 24826171 24826337 -225861517 + AluJo SINE Alu 137 301 -1 246 319 69 53 chr2 24826466 24826654 -225861200 - L2 LINE L2 -796 2518 2328 1184 124 0 6 chr2 24826655 24826824 -225861030 + THE1C LTR MaLR 1 168 -207 19758 77 20 24 chr2 24826827 24829465 -225858389 + HERVL LTR ERVL 2697 5325 -329 7357 121 10 6 chr2 24829465 24830501 -225857353 + THE1C-int LTR MaLR 541 1580 0 2119 115 50 21 chr2 24830501 24830840 -225857014 + THE1C LTR MaLR 1 349 -26 1426 173 111 7 chr2 24830842 24831113 -225856741 + LTR28 LTR ERV1 1 299 -721 853 85 0 0 chr2 24831113 24831219 -225856635 + MER61-int LTR ERV1 3755 3860 -1357 498 255 137 54 chr2 24831219 24831410 -225856444 + L1MC4a LINE L1 4285 4459 -1687 2175 121 0 3 chr2 24831410 24831723 -225856131 + AluSx SINE Alu 1 312 0 498 255 137 54 chr2 24831723 24831734 -225856120 + L1MC4a LINE L1 4459 4468 -1678 1786 164 0 3 chr2 24831734 24832026 -225855828 + AluJb SINE Alu 6 296 -16 498 255 137 54 chr2 24832026 24832245 -225855609 + L1MC4a LINE L1 4468 4742 -1404 293 221 129 49 chr2 24832919 24833082 -225854772 + L1MC4a LINE L1 5722 5897 -1911 1901 113 14 10 chr2 24833610 24833902 -225853952 + AluSg SINE Alu 18 310 0 227 98 0 59 chr2 24833932 24833983 -225853871 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 2201 92 7 7 chr2 24834015 24834318 -225853536 - AluSx SINE Alu -9 303 1 1931 122 18 0 chr2 24834655 24834984 -225852870 - AluSx SINE Alu 0 334 1 28 0 0 0 chr2 24835183 24835211 -225852643 + AT_rich Low_complexity Low_complexity 1 28 0 1819 100 75 0 chr2 24836077 24836356 -225851498 - AluSx SINE Alu -12 300 1 2257 105 0 0 chr2 24836565 24836869 -225850985 + AluSx SINE Alu 1 304 -8 186 103 0 0 chr2 24837004 24837033 -225850821 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 473 174 105 0 chr2 24837139 24837225 -225850629 + MER58A DNA MER1_type 13 107 0 1221 185 137 0 chr2 24837243 24837513 -225850341 - AluSx SINE Alu -1 311 5 1855 128 14 0 chr2 24837560 24837862 -225849992 + AluSx SINE Alu 1 306 0 668 176 120 44 chr2 24837899 24838002 -225849852 + MER20B DNA MER1_type 515 609 -174 2242 106 0 0 chr2 24838002 24838314 -225849540 - AluSx SINE Alu 0 312 1 668 176 120 44 chr2 24838314 24838460 -225849394 + MER20B DNA MER1_type 609 783 0 2199 115 0 0 chr2 24838480 24838785 -225849069 - AluSx SINE Alu -7 305 1 206 378 0 0 chr2 24839330 24839412 -225848442 + CT-rich Low_complexity Low_complexity 2 83 0 1909 134 0 10 chr2 24840512 24840811 -225847043 - AluSx SINE Alu -16 296 1 2280 84 0 7 chr2 24841450 24841749 -225846105 - AluSx SINE Alu -11 301 5 2067 123 0 0 chr2 24842384 24842676 -225845178 + AluSx SINE Alu 1 292 -20 754 286 100 4 chr2 24842687 24842946 -225844908 - MLT1K LTR MaLR -140 448 165 594 350 138 15 chr2 24843243 24843398 -225844456 - L2 LINE L2 -4 3268 3133 1828 122 11 17 chr2 24843398 24843533 -225844321 + AluJo SINE Alu 1 135 -177 2751 10 0 3 chr2 24843533 24843844 -225844010 + AluYb8 SINE Alu 1 310 -8 1828 122 11 17 chr2 24843844 24843995 -225843859 + AluJo SINE Alu 135 285 -27 222 37 0 0 chr2 24843995 24844022 -225843832 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 594 350 138 15 chr2 24844022 24844266 -225843588 - L2 LINE L2 -139 3133 2920 1858 176 11 37 chr2 24844266 24844537 -225843317 - MER7A DNA MER2_type -2696 342 83 2447 56 0 3 chr2 24844537 24844842 -225843012 + AluY SINE Alu 1 304 -7 1858 176 11 37 chr2 24844842 24844923 -225842931 - MER7A DNA MER2_type -2955 83 1 594 350 138 15 chr2 24844923 24845178 -225842676 - L2 LINE L2 -352 2920 2588 29 0 0 0 chr2 24845314 24845343 -225842511 + AT_rich Low_complexity Low_complexity 1 29 0 1883 145 3 10 chr2 24845343 24845639 -225842215 + AluSx SINE Alu 1 294 -18 1000 69 8 0 chr2 24845645 24845776 -225842078 - L1MA2 LINE L1 0 6304 6173 2076 82 0 56 chr2 24845799 24846102 -225841752 - AluSq SINE Alu -27 286 1 663 289 52 41 chr2 24846112 24846479 -225841375 + L1MC4 LINE L1 7298 7668 -374 348 115 19 0 chr2 24846662 24846714 -225841140 - AluSp/q SINE Alu -71 232 180 1058 161 11 0 chr2 24846758 24846938 -225840916 - AluSx SINE Alu -121 191 10 209 171 98 0 chr2 24846983 24847024 -225840830 + L2 LINE L2 2699 2743 -571 1214 154 168 62 chr2 24847029 24847436 -225840418 + Tigger5 DNA MER2_type 5 2323 0 397 289 66 0 chr2 24847828 24847949 -225839905 + L2 LINE L2 3144 3272 0 2154 108 0 0 chr2 24848016 24848311 -225839543 - AluSx SINE Alu -15 297 3 575 267 182 27 chr2 24848503 24848653 -225839201 + MIR SINE MIR 2 127 -135 216 0 0 0 chr2 24848653 24848677 -225839177 + (TA)n Simple_repeat Simple_repeat 2 25 0 2078 127 0 0 chr2 24848677 24848976 -225838878 - AluSx SINE Alu -13 299 1 575 267 182 27 chr2 24848976 24849049 -225838805 + MIR SINE MIR 126 261 -1 805 310 32 29 chr2 24849053 24849363 -225838491 - L3 LINE CR1 -428 1149 839 2084 119 0 0 chr2 24849372 24849665 -225838189 - AluSx SINE Alu -19 293 1 278 307 235 18 chr2 24849666 24849832 -225838022 - L3 LINE CR1 -916 661 460 369 143 39 39 chr2 24849887 24849964 -225837890 + L1MC/D LINE L1 5708 5784 -2024 264 352 16 0 chr2 24850358 24850486 -225837368 + LTR67 LTR ERVL 428 557 0 1372 185 10 40 chr2 24850548 24850845 -225837009 + AluJb SINE Alu 1 288 -24 2031 104 19 10 chr2 24850855 24851162 -225836692 + AluSg SINE Alu 1 310 0 461 288 95 18 chr2 24851304 24851526 -225836328 - HAL1 LINE L1 -1499 1008 770 * 628 238 65 65 chr2 24851519 24851813 -225836041 - HAL1 LINE L1 -2151 356 63 225 308 107 58 chr2 24851941 24852165 -225835689 - L3 LINE CR1 -1148 429 195 25 31 0 0 chr2 24852285 24852317 -225835537 + AT_rich Low_complexity Low_complexity 1 32 0 2186 92 7 3 chr2 24852789 24853095 -225834759 - AluSq SINE Alu -6 307 1 380 300 36 7 chr2 24853096 24853236 -225834618 + LTR67 LTR ERVL 414 557 0 365 319 93 51 chr2 24853909 24854072 -225833782 + HERVL LTR ERVL 826 981 -4783 303 28 0 0 chr2 24854072 24854108 -225833746 + (CA)n Simple_repeat Simple_repeat 2 37 0 365 319 93 51 chr2 24854108 24854298 -225833556 + HERVL LTR ERVL 981 1194 -4570 1874 162 3 10 chr2 24854706 24854725 -225833129 - AluJb SINE Alu -7 305 287 381 22 0 0 chr2 24854725 24854771 -225833083 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1874 162 3 10 chr2 24854771 24855054 -225832800 - AluJb SINE Alu -25 287 5 1451 307 91 66 chr2 24855086 24855755 -225832099 + HERVL LTR ERVL 2155 2806 -2848 2348 85 10 0 chr2 24855755 24856049 -225831805 + AluSq SINE Alu 1 297 -16 1451 307 91 66 chr2 24856049 24856180 -225831674 + HERVL LTR ERVL 2806 2932 -2722 2173 104 17 17 chr2 24856180 24856479 -225831375 + AluSx SINE Alu 1 299 -13 1451 307 91 66 chr2 24856479 24856517 -225831337 + HERVL LTR ERVL 2932 2968 -2686 1835 145 24 10 chr2 24856517 24856813 -225831041 - AluJb SINE Alu -12 300 1 450 0 0 0 chr2 24856813 24856863 -225830991 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1887 142 8 4 chr2 24856868 24857135 -225830719 - AluSx SINE Alu -44 268 1 1451 307 91 66 chr2 24857135 24857734 -225830120 + HERVL LTR ERVL 2971 3600 -2054 323 341 84 9 chr2 24857742 24857968 -225829886 + HERVL LTR ERVL 3731 3973 -1791 2077 138 10 0 chr2 24858043 24858348 -225829506 + AluSx SINE Alu 1 308 -4 2356 112 7 0 chr2 24858597 24858902 -225828952 + AluSx SINE Alu 1 307 -5 1961 152 0 7 chr2 24859577 24859879 -225827975 + AluJb SINE Alu 7 306 -6 283 283 66 9 chr2 24860330 24860436 -225827418 - MER5A DNA MER1_type -75 114 3 188 366 9 62 chr2 24860542 24860614 -225827240 + MIR3 SINE MIR 1 66 -142 2318 99 0 0 chr2 24860614 24860932 -225826922 - AluSx SINE Alu 0 312 1 188 366 9 62 chr2 24860932 24860971 -225826883 + MIR3 SINE MIR 66 106 -102 256 172 0 109 chr2 24861040 24861104 -225826750 - L2 LINE L2 -5 3308 3252 180 326 0 0 chr2 24861100 24861143 -225826711 + L2 LINE L2 3218 3260 -12 * 219 276 69 9 chr2 24861738 24861854 -225826000 + L2 LINE L2 1892 2014 -1300 298 274 77 72 chr2 24862052 24862260 -225825594 + L2 LINE L2 3044 3252 -20 1733 168 0 72 chr2 24862885 24863218 -225824636 - AluJb SINE Alu -3 309 1 287 264 22 43 chr2 24864201 24864312 -225823542 + MIR SINE MIR 13 122 -86 683 245 107 30 chr2 24865132 24865365 -225822489 + MIR SINE MIR 1 251 -11 2289 104 0 0 chr2 24865567 24865903 -225821951 - AluSg SINE Alu 0 336 1 349 238 140 14 chr2 24866407 24866550 -225821304 - MER53 DNA DNA -2 187 27 1692 98 0 0 chr2 24866550 24866764 -225821090 - AluSg/x SINE Alu -17 295 82 1527 129 110 36 chr2 24866812 24867121 -225820733 - MER21A LTR ERV1 -6 925 594 1339 173 60 11 chr2 24867277 24867653 -225820201 + MER21A LTR ERV1 1 418 -445 186 306 0 56 chr2 24867756 24867828 -225820026 + L2 LINE L2 3205 3272 0 2523 90 0 0 chr2 24867911 24868221 -225819633 - AluSx SINE Alu -2 310 1 2349 80 7 3 chr2 24869122 24869422 -225818432 + AluSx SINE Alu 12 312 0 339 274 125 21 chr2 24869923 24869950 -225817904 + L1ME4a LINE L1 5806 5829 -292 2208 108 0 14 chr2 24869950 24870245 -225817609 - AluSg SINE Alu -19 291 1 339 274 125 21 chr2 24870245 24870498 -225817356 + L1ME4a LINE L1 5829 6115 -6 393 356 34 34 chr2 24870627 24870863 -225816991 + L2 LINE L2 3016 3251 -21 678 226 55 0 chr2 24872063 24872209 -225815645 + MIR SINE MIR 80 233 -29 24 0 0 0 chr2 24872226 24872250 -225815604 + AT_rich Low_complexity Low_complexity 1 24 0 2415 90 3 0 chr2 24872940 24873250 -225814604 - AluSq SINE Alu -2 311 1 555 276 150 52 chr2 24875306 24875632 -225812222 - L2 LINE L2 -5 3308 2951 318 315 19 19 chr2 24876351 24876459 -225811395 - MIR SINE MIR -147 115 8 254 159 0 0 chr2 24876474 24876518 -225811336 + MER5A DNA MER1_type 9 52 -137 705 225 12 65 chr2 24876665 24876834 -225811020 + MIR SINE MIR 14 173 -89 233 158 0 0 chr2 24876834 24876872 -225810982 - MER4A LTR ERV1 0 664 627 2342 98 0 13 chr2 24876878 24877194 -225810660 - AluSx SINE Alu 0 312 1 1678 114 6 81 chr2 24877195 24877539 -225810315 - MER4A LTR ERV1 -25 639 262 677 91 0 10 chr2 24877540 24877639 -225810215 - MER4A LTR ERV1 -566 98 1 257 250 0 16 chr2 24877639 24877703 -225810151 + MIR SINE MIR 170 232 -30 206 357 21 49 chr2 24877883 24878026 -225809828 - MIR SINE MIR -121 141 3 2185 136 0 0 chr2 24878119 24878420 -225809434 - AluSx SINE Alu -11 301 1 4111 140 23 65 chr2 24878670 24879248 -225808606 - L1MC1 LINE L1 -420 5913 5312 2230 133 0 0 chr2 24879248 24879548 -225808306 - AluSx SINE Alu -12 300 1 4111 140 23 65 chr2 24879548 24879593 -225808261 - L1MC1 LINE L1 -1021 5312 5267 2810 99 8 3 chr2 24879593 24879966 -225807888 - THE1C LTR MaLR 0 375 1 4111 140 23 65 chr2 24879966 24880138 -225807716 - L1MC1 LINE L1 -1066 5267 5187 2184 110 24 0 chr2 24880138 24880428 -225807426 - AluSx SINE Alu -15 297 1 4111 140 23 65 chr2 24880428 24880688 -225807166 - L1MC1 LINE L1 -1146 5187 4918 393 265 71 83 chr2 24881266 24881478 -225806376 - MIR SINE MIR -36 226 9 2332 89 0 3 chr2 24884732 24885023 -225802831 - AluSc SINE Alu -19 290 1 306 50 0 0 chr2 24885059 24885099 -225802755 + (CA)n Simple_repeat Simple_repeat 2 41 0 318 291 51 0 chr2 24885100 24885179 -225802675 - L1MC4 LINE L1 -1345 6697 6615 2076 85 31 4 chr2 24885222 24885482 -225802372 - AluSg SINE Alu -30 280 14 1982 166 3 13 chr2 24885868 24886175 -225801679 + AluJb SINE Alu 1 304 -8 2140 130 19 7 chr2 24886660 24886968 -225800886 + AluJb SINE Alu 1 312 0 767 277 50 85 chr2 24887236 24887435 -225800419 + L1ME4a LINE L1 5479 5683 -438 1951 170 0 3 chr2 24887435 24887746 -225800108 - AluJb SINE Alu -2 310 1 767 277 50 85 chr2 24887746 24888069 -225799785 + L1ME4a LINE L1 5683 5976 -145 2262 132 0 0 chr2 24888069 24888372 -225799482 + AluSx SINE Alu 1 303 -9 767 277 50 85 chr2 24888372 24888509 -225799345 + L1ME4a LINE L1 5976 6116 -5 2338 97 0 0 chr2 24888679 24888969 -225798885 - AluSg SINE Alu -20 290 1 193 362 141 22 chr2 24888995 24889307 -225798547 + L2 LINE L2 2550 2898 -416 234 0 0 0 chr2 24891487 24891513 -225796341 + (T)n Simple_repeat Simple_repeat 1 26 0 2310 102 0 3 chr2 24892576 24892870 -225794984 + AluSq SINE Alu 1 293 -20 2407 78 0 0 chr2 24893153 24893447 -225794407 - AluY SINE Alu -17 294 1 380 218 122 107 chr2 24893747 24894010 -225793844 - MLT1J LTR MaLR -38 473 167 1852 160 10 3 chr2 24894010 24894303 -225793551 - AluJb SINE Alu -17 295 1 380 218 122 107 chr2 24894303 24894470 -225793384 - MLT1J LTR MaLR -344 167 4 193 29 59 0 chr2 24894552 24894586 -225793268 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 264 374 11 26 chr2 24894790 24894980 -225792874 + L3 LINE CR1 1171 1357 -220 2106 105 80 23 chr2 24894995 24895347 -225792507 - THE1C LTR MaLR 0 375 4 244 277 12 36 chr2 24895840 24895923 -225791931 + L2 LINE L2 3223 3303 -10 323 188 14 29 chr2 24896039 24896108 -225791746 + MIR3 SINE MIR 126 193 -15 46 33 0 0 chr2 24896617 24896677 -225791177 + AT_rich Low_complexity Low_complexity 1 60 0 320 147 0 137 chr2 24896677 24896721 -225791133 - L1MB7 LINE L1 -41 6143 6117 1986 126 12 64 chr2 24896721 24897047 -225790807 + AluSx SINE Alu 1 309 -3 320 147 0 137 chr2 24897047 24897097 -225790757 - L1MB7 LINE L1 -67 6117 6062 444 308 77 0 chr2 24897345 24897501 -225790353 + MIR3 SINE MIR 16 183 -25 2245 126 7 0 chr2 24897797 24898106 -225789748 - AluSx SINE Alu -1 311 1 2101 125 0 30 chr2 24898994 24899155 -225788699 - AluSx SINE Alu -18 294 145 2119 115 52 0 chr2 24899155 24899441 -225788413 - AluSx SINE Alu -11 301 1 2101 125 0 30 chr2 24899441 24899582 -225788272 - AluSx SINE Alu -167 145 1 205 200 22 0 chr2 24899641 24899686 -225788168 + GA-rich Low_complexity Low_complexity 5 50 0 186 333 32 0 chr2 24899722 24899785 -225788069 - MIR SINE MIR -66 142 78 242 361 93 10 chr2 24899895 24900100 -225787754 - L3 LINE CR1 -97 1480 1259 310 252 102 24 chr2 24900137 24900264 -225787590 + MER5B DNA MER1_type 42 178 0 183 184 0 0 chr2 24900293 24900331 -225787523 + CT-rich Low_complexity Low_complexity 3 40 0 2140 117 33 0 chr2 24900530 24900830 -225787024 - AluSx SINE Alu 0 312 3 1327 167 37 35 chr2 24901204 24901417 -225786437 + L1MB5 LINE L1 4958 5169 -1005 2098 121 7 23 chr2 24901417 24901722 -225786132 + AluSx SINE Alu 3 302 -10 1327 167 37 35 chr2 24901722 24902578 -225785276 + L1MB5 LINE L1 5169 6174 0 427 305 51 30 chr2 24903416 24903968 -225783886 - L1MC5 LINE L1 -271 7690 7222 2450 153 62 46 chr2 24904201 24904698 -225783156 + MLT1D LTR MaLR 1 505 0 209 73 0 49 chr2 24905922 24905963 -225781891 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2270 82 58 0 chr2 24906101 24906395 -225781459 + AluY SINE Alu 1 311 0 434 262 66 87 chr2 24906536 24906719 -225781135 - MIR SINE MIR -82 180 2 1995 139 17 3 chr2 24907601 24907902 -225779952 + AluJb SINE Alu 1 305 -7 309 302 0 63 chr2 24907902 24908011 -225779843 + MER5A DNA MER1_type 66 166 -23 267 395 15 24 chr2 24908011 24908216 -225779638 + MIR SINE MIR 1 203 -59 783 209 24 80 chr2 24908216 24908465 -225779389 + MLT1D LTR MaLR 1 235 -270 2151 128 7 0 chr2 24909039 24909329 -225778525 + AluSx SINE Alu 1 292 -20 2160 100 7 17 chr2 24910110 24910411 -225777443 - AluSp SINE Alu -15 298 1 484 156 31 0 chr2 24910561 24910657 -225777197 - L1MA9 LINE L1 -277 6035 5937 2103 103 43 7 chr2 24910686 24910967 -225776887 - AluSx SINE Alu -21 291 1 827 230 56 37 chr2 24910967 24911088 -225776766 + MLT1A2 LTR MaLR 34 151 -223 718 80 0 0 chr2 24911088 24911188 -225776666 + HY3 scRNA scRNA 1 100 -1 827 230 56 37 chr2 24911188 24911218 -225776636 + MLT1A2 LTR MaLR 151 179 -195 1945 145 19 13 chr2 24911218 24911528 -225776326 + AluJo SINE Alu 1 312 0 827 230 56 37 chr2 24911528 24911743 -225776111 + MLT1A2 LTR MaLR 179 358 -16 342 294 37 0 chr2 24912043 24912152 -225775702 - L1MC4 LINE L1 -144 7898 7786 849 235 37 89 chr2 24912288 24912372 -225775482 - L1M4 LINE L1 -2793 3353 3266 2352 111 0 9 chr2 24912372 24912688 -225775166 - AluSp SINE Alu 0 313 1 849 235 37 89 chr2 24912688 24912928 -225774926 - L1M4 LINE L1 -2880 3266 3015 519 205 137 0 chr2 24912928 24913045 -225774809 - FLAM_A SINE Alu 0 133 1 849 235 37 89 chr2 24913045 24913406 -225774448 - L1M4 LINE L1 -3131 3015 2727 1038 129 14 0 chr2 24913507 24913654 -225774200 + AluSg/x SINE Alu 144 292 -20 2275 100 3 10 chr2 24914435 24914735 -225773119 - AluSp SINE Alu -15 298 1 1652 143 18 73 chr2 24914887 24914978 -225772876 - L1MA9 LINE L1 -277 6035 5941 2190 102 0 3 chr2 24914978 24915304 -225772550 - AluSx SINE Alu 0 325 1 1652 143 18 73 chr2 24915304 24915554 -225772300 - L1MA9 LINE L1 -371 5941 5712 322 200 133 0 chr2 24915587 24915662 -225772192 + L1MA9 LINE L1 6159 6243 -69 648 118 18 0 chr2 24915663 24915773 -225772081 + FLAM_C SINE Alu 32 143 0 312 128 7 0 chr2 24915773 24915830 -225772024 + Alu SINE Alu 1 45 -254 2230 94 13 7 chr2 24916003 24916302 -225771552 + AluY SINE Alu 1 301 -10 2276 103 10 13 chr2 24916621 24916976 -225770878 + AluSq SINE Alu 1 354 0 1528 266 90 53 chr2 24917002 24918060 -225769794 + L2 LINE L2 2184 3289 -24 2209 129 0 3 chr2 24918060 24918362 -225769492 - AluSx SINE Alu -11 301 1 1528 266 90 53 chr2 24918362 24918384 -225769470 + L2 LINE L2 3289 3309 -4 1791 231 54 91 chr2 24918620 24919153 -225768701 + LTR8 LTR ERV1 17 519 -172 2191 105 7 0 chr2 24919153 24919447 -225768407 + AluSq SINE Alu 6 301 -12 1791 231 54 91 chr2 24919447 24919614 -225768240 + LTR8 LTR ERV1 519 691 0 229 88 0 0 chr2 24919716 24919750 -225768104 - MER3 DNA MER1_type -160 49 16 431 208 0 0 chr2 24919781 24919877 -225767977 - L1ME2 LINE L1 -208 5956 5861 1867 149 0 50 chr2 24919983 24920306 -225767548 - AluJo SINE Alu -1 311 5 216 350 68 10 chr2 24920426 24920529 -225767325 - L2 LINE L2 -695 2619 2511 239 324 14 0 chr2 24921245 24921319 -225766535 - L2 LINE L2 -210 3062 2988 413 255 0 0 chr2 24921631 24921729 -225766125 + L1ME1 LINE L1 6066 6163 -3 264 139 278 0 chr2 24921800 24921872 -225765982 - MIR SINE MIR -56 152 61 1978 111 69 7 chr2 24921917 24922206 -225765648 - AluSx SINE Alu -5 307 1 427 213 132 46 chr2 24922504 24922539 -225765315 + MER53 DNA DNA 1 32 -157 1827 130 43 14 chr2 24922539 24922839 -225765015 + AluJo SINE Alu 1 308 0 427 213 132 46 chr2 24922839 24922976 -225764878 + MER53 DNA DNA 32 189 0 314 203 7 61 chr2 24922983 24923131 -225764723 + A-rich Low_complexity Low_complexity 2 141 0 22 0 0 0 chr2 24923826 24923848 -225764006 + AT_rich Low_complexity Low_complexity 1 22 0 524 333 33 14 chr2 24923862 24924138 -225763716 + L1ME4a LINE L1 5603 5883 -238 227 186 34 0 chr2 24924193 24924252 -225763602 - L1MD2 LINE L1 0 6359 6299 1272 148 10 5 chr2 24924257 24924466 -225763388 + AluSc SINE Alu 1 210 -99 1171 115 11 17 chr2 24924885 24925079 -225762775 + AluSp SINE Alu 114 306 0 2833 141 40 82 chr2 24925084 24925221 -225762633 - L1MB8 LINE L1 -16 6162 6021 586 152 9 0 chr2 24925221 24925326 -225762528 + L1PB2 LINE L1 6040 6145 -6 1947 119 13 32 chr2 24925326 24925658 -225762196 + AluSx SINE Alu 1 312 0 2833 141 40 82 chr2 24925658 24925885 -225761969 - L1MB8 LINE L1 -156 6022 5787 2424 103 3 0 chr2 24925885 24926197 -225761657 - AluSp SINE Alu 0 313 1 2833 141 40 82 chr2 24926197 24926485 -225761369 - L1MB8 LINE L1 -391 5787 5536 344 247 11 44 chr2 24926507 24926660 -225761194 - MER20B DNA MER1_type -41 742 594 2116 128 0 17 chr2 24926660 24926958 -225760896 - AluSx SINE Alu -18 294 2 344 247 11 44 chr2 24926958 24926986 -225760868 - MER20B DNA MER1_type -189 594 567 297 183 0 0 chr2 24927218 24927278 -225760576 + (CA)n Simple_repeat Simple_repeat 1 60 0 407 227 82 67 chr2 24928454 24928648 -225759206 - MIR3 SINE MIR -6 202 6 1315 121 0 0 chr2 24928649 24928822 -225759032 - AluJb SINE Alu -15 297 125 180 111 0 0 chr2 24928829 24928856 -225758998 + (TA)n Simple_repeat Simple_repeat 2 28 0 2045 193 156 34 chr2 24929448 24930147 -225757707 - LTR48 LTR ERV1 0 787 4 3894 81 9 28 chr2 24930305 24930483 -225757371 - MER41A LTR ERV1 0 554 374 2403 95 0 0 chr2 24930483 24930779 -225757075 - AluSg1 SINE Alu -13 296 1 3894 81 9 28 chr2 24930779 24931165 -225756689 - MER41A LTR ERV1 -180 374 1 209 231 0 19 chr2 24931258 24931310 -225756544 - L2 LINE L2 -13 3300 3250 195 324 95 14 chr2 24931951 24932161 -225755693 - L2 LINE L2 -1018 2296 2070 2292 99 3 26 chr2 24932178 24932491 -225755363 + AluSx SINE Alu 1 306 -6 322 242 167 30 chr2 24932531 24932663 -225755191 - L1ME LINE L1 -398 5723 5574 226 318 84 50 chr2 24932942 24933121 -225754733 + MIR3 SINE MIR 16 200 -8 347 183 144 10 chr2 24933315 24933419 -225754435 + L2 LINE L2 2571 2688 -626 2111 145 0 0 chr2 24933420 24933724 -225754130 + AluSx SINE Alu 1 304 -8 248 242 32 0 chr2 24933733 24933795 -225754059 + L2 LINE L2 2760 2823 -491 441 0 0 0 chr2 24933818 24933867 -225753987 + (CA)n Simple_repeat Simple_repeat 1 49 0 649 272 48 9 chr2 24933911 24934139 -225753715 + L2 LINE L2 2991 3227 -86 189 139 116 0 chr2 24934377 24934420 -225753434 + L2 LINE L2 3202 3249 -64 182 240 40 20 chr2 24934874 24934924 -225752930 - L2 LINE L2 -1 3312 3262 2550 83 0 0 chr2 24934957 24935269 -225752585 + AluSp SINE Alu 2 313 0 979 75 0 8 chr2 24935283 24935403 -225752451 + AluSq/x SINE Alu 21 139 -174 330 70 0 0 chr2 24935403 24935473 -225752381 + Alu SINE Alu 243 312 0 1591 139 68 24 chr2 24935671 24936026 -225751828 + AluJb SINE Alu 1 368 0 338 333 24 0 chr2 24936433 24936643 -225751211 + L1 LINE L1 4369 4583 -1563 252 333 39 22 chr2 24936870 24937182 -225750672 + L1 LINE L1 4735 5051 -1095 1192 130 0 0 chr2 24937331 24937500 -225750354 + AluSp SINE Alu 137 305 -8 2254 118 0 10 chr2 24937510 24937823 -225750031 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 24938516 24938540 -225749314 + AT_rich Low_complexity Low_complexity 1 24 0 640 226 55 0 chr2 24938557 24938703 -225749151 - MIR SINE MIR -29 233 80 756 151 13 10 chr2 24940022 24940328 -225747526 + CT-rich Low_complexity Low_complexity 1 307 0 291 307 0 0 chr2 24940355 24940443 -225747411 - MIR SINE MIR -2 260 173 2215 108 40 0 chr2 24940741 24941038 -225746816 - AluSg SINE Alu -1 309 1 2198 113 0 0 chr2 24941104 24941412 -225746442 - AluSq SINE Alu 0 308 1 845 236 12 56 chr2 24941412 24941662 -225746192 - L1MA9 LINE L1 -362 5950 5712 573 159 9 18 chr2 24941771 24941884 -225745970 + FLAM_C SINE Alu 32 143 0 1304 108 48 0 chr2 24941894 24942080 -225745774 + AluY SINE Alu 1 195 -116 207 324 93 19 chr2 24942346 24942454 -225745400 - MIR SINE MIR -122 140 25 23 0 0 0 chr2 24943087 24943110 -225744744 + AT_rich Low_complexity Low_complexity 1 23 0 2058 132 14 0 chr2 24943208 24943495 -225744359 + AluSx SINE Alu 1 291 -21 2456 61 0 0 chr2 24943499 24943807 -225744047 + AluSc SINE Alu 1 308 0 2365 107 3 3 chr2 24944027 24944337 -225743517 - AluSx SINE Alu -2 310 1 2385 110 0 0 chr2 24945094 24945402 -225742452 - AluSx SINE Alu -4 308 1 910 273 105 19 chr2 24945659 24946069 -225741785 + L2 LINE L2 2867 3311 -2 2118 142 10 0 chr2 24946216 24946512 -225741342 + AluJb SINE Alu 1 299 -13 250 136 0 0 chr2 24946932 24946976 -225740878 - MER4-int LTR ERV1 -5437 1161 1118 495 0 0 0 chr2 24947413 24947468 -225740386 + (TG)n Simple_repeat Simple_repeat 1 55 0 2426 57 3 41 chr2 24947580 24947898 -225739956 + AluY SINE Alu 1 306 -5 1977 163 0 3 chr2 24947909 24948210 -225739644 + AluSx SINE Alu 1 300 -12 2279 51 51 0 chr2 24948801 24949077 -225738777 + AluY SINE Alu 1 290 -21 843 206 0 57 chr2 24949316 24949491 -225738363 - AluSg/x SINE Alu -14 296 132 2297 122 0 0 chr2 24949491 24949795 -225738059 - AluSx SINE Alu -8 304 1 2545 45 10 19 chr2 24951122 24951436 -225736418 + AluY SINE Alu 1 311 0 243 0 0 0 chr2 24951765 24951792 -225736062 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 881 92 8 0 chr2 24952328 24952447 -225735407 + AluY SINE Alu 176 295 -16 228 233 207 0 chr2 24952475 24952591 -225735263 + L1ME4a LINE L1 5978 6117 -4 2437 81 0 3 chr2 24952594 24952889 -225734965 + AluSq SINE Alu 1 294 -19 436 282 43 62 chr2 24953337 24953479 -225734375 + MIR SINE MIR 20 158 -104 2180 136 0 3 chr2 24953479 24953787 -225734067 + AluSx SINE Alu 2 308 -4 436 282 43 62 chr2 24953787 24953853 -225734001 + MIR SINE MIR 158 224 -38 1709 193 3 10 chr2 24954507 24954808 -225733046 + AluJo SINE Alu 1 299 -13 1654 171 44 14 chr2 24954943 24955305 -225732549 - L1MC1 LINE L1 0 6333 5961 196 178 44 0 chr2 24956622 24956667 -225731187 + L2 LINE L2 3220 3266 -6 300 303 23 45 chr2 24956708 24956840 -225731014 - L1ME3A LINE L1 -36 6134 6006 236 149 149 0 chr2 24956873 24956940 -225730914 - L1ME3A LINE L1 -232 5938 5862 2203 122 3 16 chr2 24956956 24957268 -225730586 + AluSq SINE Alu 1 308 -5 2121 107 4 4 chr2 24957490 24957771 -225730083 - AluSx SINE Alu -31 281 1 203 232 0 36 chr2 24957944 24958000 -225729854 + (TATG)n Simple_repeat Simple_repeat 3 56 0 256 93 0 23 chr2 24958099 24958142 -225729712 - L1ME3A LINE L1 -2071 5737 5696 343 306 208 0 chr2 24958145 24958318 -225729536 - L1ME3A LINE L1 -2165 5643 5435 2269 96 17 13 chr2 24958345 24958647 -225729207 + AluSx SINE Alu 1 303 -9 272 0 79 0 chr2 24958762 24958800 -225729054 + CT-rich Low_complexity Low_complexity 4 44 0 1951 109 62 7 chr2 24958926 24959202 -225728652 + AluSg SINE Alu 9 299 -11 276 328 16 55 chr2 24959283 24959411 -225728443 + MIR SINE MIR 60 182 -80 428 186 372 0 chr2 24960116 24960245 -225727609 - MER58B DNA MER1_type 0 341 165 663 208 8 8 chr2 24960249 24960379 -225727475 - FLAM_A SINE Alu -2 131 2 698 190 76 0 chr2 24960396 24960554 -225727300 + MLT1B LTR MaLR 7 176 -214 817 183 59 0 chr2 24960556 24960709 -225727145 + AluJb SINE Alu 137 298 -14 2443 39 0 14 chr2 24960716 24961041 -225726813 + AluY SINE Alu 5 325 0 684 167 18 11 chr2 24961080 24961229 -225726625 + MLT1C LTR MaLR 239 466 -1 189 0 0 0 chr2 24961258 24961279 -225726575 + (TTC)n Simple_repeat Simple_repeat 3 23 0 1236 89 0 6 chr2 24961440 24961597 -225726257 + AluJb SINE Alu 72 227 -85 3752 172 81 55 chr2 24962211 24962881 -225724973 - LTR13 LTR ERVK 0 954 252 2595 60 7 0 chr2 24962881 24963182 -225724672 - AluY SINE Alu -8 303 1 3752 172 81 55 chr2 24963182 24963441 -225724413 - LTR13 LTR ERVK -702 252 1 2122 135 0 3 chr2 24963496 24963793 -225724061 - AluJb SINE Alu -16 296 1 248 288 209 17 chr2 24963799 24963976 -225723878 - MIR SINE MIR -12 250 40 2499 69 0 0 chr2 24964248 24964539 -225723315 - AluSc SINE Alu -18 291 1 254 156 47 0 chr2 24964897 24964961 -225722893 + GA-rich Low_complexity Low_complexity 2 68 0 306 274 11 63 chr2 24965913 24966008 -225721846 - L1MC4 LINE L1 -1340 6702 6613 185 196 18 0 chr2 24966015 24966071 -225721783 + (TA)n Simple_repeat Simple_repeat 1 57 0 2230 122 3 0 chr2 24966124 24966427 -225721427 + AluSg SINE Alu 1 304 -6 2290 97 7 10 chr2 24967074 24967374 -225720480 + AluSg SINE Alu 1 299 -11 969 269 60 95 chr2 24967797 24968324 -225719530 - L2 LINE L2 -105 3208 2708 2185 105 0 7 chr2 24968324 24968631 -225719223 - AluSx SINE Alu 0 306 2 969 269 60 95 chr2 24968631 24968898 -225718956 - L2 LINE L2 -605 2708 2433 535 224 115 0 chr2 24969001 24969157 -225718697 + L1M4 LINE L1 5520 5693 -485 2172 115 0 3 chr2 24969159 24969445 -225718409 + AluSx SINE Alu 1 285 -27 297 0 0 0 chr2 24969457 24969490 -225718364 + (TG)n Simple_repeat Simple_repeat 2 34 0 2213 167 54 11 chr2 24969495 24969959 -225717895 + L1HS LINE L1 5639 6123 -61 2232 120 3 0 chr2 24969960 24970261 -225717593 - AluSx SINE Alu -10 302 1 515 299 145 43 chr2 24972283 24972608 -225715246 - L2 LINE L2 -5 3308 2951 294 315 19 19 chr2 24973327 24973435 -225714419 - MIR SINE MIR -147 115 8 237 159 0 0 chr2 24973450 24973494 -225714360 + MER5A DNA MER1_type 9 52 -137 642 231 12 65 chr2 24973641 24973810 -225714044 + MIR SINE MIR 14 173 -89 1690 111 5 126 chr2 24973810 24973854 -225714000 - MER4A LTR ERV1 0 664 616 2347 98 0 13 chr2 24973854 24974170 -225713684 - AluSx SINE Alu 0 312 1 1690 111 5 126 chr2 24974170 24974515 -225713339 - MER4A LTR ERV1 -48 616 262 682 91 0 10 chr2 24974516 24974615 -225713239 - MER4A LTR ERV1 -566 98 1 246 250 0 16 chr2 24974615 24974679 -225713175 + MIR SINE MIR 170 232 -30 2205 133 0 0 chr2 24975095 24975396 -225712458 - AluSx SINE Alu -11 301 1 4113 139 23 64 chr2 24975646 24976224 -225711630 - L1MC1 LINE L1 -420 5913 5313 2208 137 0 0 chr2 24976224 24976524 -225711330 - AluSx SINE Alu -12 300 1 4113 139 23 64 chr2 24976524 24976569 -225711285 - L1MC1 LINE L1 -1020 5313 5268 2429 115 16 11 chr2 24976569 24976942 -225710912 - THE1C LTR MaLR 0 375 1 4113 139 23 64 chr2 24976942 24977112 -225710742 - L1MC1 LINE L1 -1065 5268 5187 2195 110 24 0 chr2 24977112 24977402 -225710452 - AluSx SINE Alu -15 297 1 4113 139 23 64 chr2 24977402 24977662 -225710192 - L1MC1 LINE L1 -1146 5187 4918 377 275 155 26 chr2 24978240 24978433 -225709421 - MIR SINE MIR -36 226 9 248 159 191 0 chr2 24980911 24980974 -225706880 - MIR3 SINE MIR -25 183 109 821 113 8 15 chr2 24980986 24981119 -225706735 + FLAM_C SINE Alu 2 133 0 2299 119 0 0 chr2 24981300 24981602 -225706252 - AluSx SINE Alu -10 302 1 287 228 0 0 chr2 24982463 24982520 -225705334 - MIR SINE MIR -74 188 132 30 27 0 0 chr2 24982813 24982850 -225705004 + AT_rich Low_complexity Low_complexity 1 37 0 270 0 0 0 chr2 24982859 24982889 -225704965 + (TG)n Simple_repeat Simple_repeat 2 31 0 2211 132 3 0 chr2 24983117 24983420 -225704434 + AluSx SINE Alu 1 304 -8 720 125 0 9 chr2 24985893 24986005 -225701849 - FLAM_A SINE Alu -4 138 28 2284 112 7 0 chr2 24986330 24986635 -225701219 - AluSx SINE Alu -2 310 4 2297 121 0 0 chr2 24989461 24989768 -225698086 + AluSx SINE Alu 1 307 -5 219 319 127 24 chr2 24990392 24990518 -225697336 - MIR SINE MIR -57 205 68 198 103 0 0 chr2 24991625 24991654 -225696200 + (CTG)n Simple_repeat Simple_repeat 3 31 0 2159 113 0 25 chr2 24992204 24992522 -225695332 + AluSx SINE Alu 1 310 -2 834 104 0 0 chr2 24992661 24992776 -225695078 + AluY SINE Alu 197 311 0 365 310 118 27 chr2 24993214 24993401 -225694453 - MIR3 SINE MIR 0 208 5 1343 144 0 5 chr2 24993660 24993862 -225693992 + AluSg/x SINE Alu 110 310 -2 318 191 16 0 chr2 24994561 24994624 -225693230 - AluJ/FLAM SINE Alu -218 84 21 741 273 10 19 chr2 24994626 24994667 -225693187 - MLT1G LTR MaLR 0 590 550 1719 98 4 18 chr2 24994667 24994892 -225692962 - AluSg/x SINE Alu -15 295 74 741 273 10 19 chr2 24994892 24995055 -225692799 - MLT1G LTR MaLR -40 550 388 2138 144 0 0 chr2 24995055 24995354 -225692500 + AluSx SINE Alu 1 299 -13 252 364 18 12 chr2 24996107 24996272 -225691582 + L1ME4a LINE L1 5432 5597 -2211 527 88 20 20 chr2 24996296 24996398 -225691456 + (TTTC)n Simple_repeat Simple_repeat 1 102 0 2077 139 0 0 chr2 24996420 24996708 -225691146 - AluSx SINE Alu -12 300 13 1693 188 3 38 chr2 24996901 24997188 -225690666 + AluJo SINE Alu 1 277 -35 291 93 0 0 chr2 24997188 24997231 -225690623 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1693 188 3 38 chr2 24997231 24997263 -225690591 + AluJo SINE Alu 277 309 -3 271 337 47 0 chr2 24997317 24997403 -225690451 + L2 LINE L2 3197 3286 -27 354 362 93 41 chr2 24997488 24997756 -225690098 + L1ME4a LINE L1 5840 6121 0 2304 121 0 3 chr2 24997756 24998069 -225689785 + AluJb SINE Alu 1 312 0 288 217 0 29 chr2 24998104 24998173 -225689681 + MLT1G3 LTR MaLR 451 517 -13 473 298 44 58 chr2 24998337 24998542 -225689312 - L2 LINE L2 -1 3312 3111 372 242 152 12 chr2 24998616 24998781 -225689073 + HAL1 LINE L1 2025 2212 -295 181 253 44 44 chr2 24998942 24999033 -225688821 - L2 LINE L2 -2 3311 3221 1679 183 47 4 chr2 24999163 24999442 -225688412 - AluJo SINE Alu -21 291 1 275 347 57 8 chr2 25000559 25000683 -225687171 - MIR3 SINE MIR -15 193 64 2471 67 0 0 chr2 25003390 25003688 -225684166 + AluSp SINE Alu 1 298 -15 1668 160 12 89 chr2 25005773 25006098 -225681756 - AluJb SINE Alu -12 300 1 2280 75 0 0 chr2 25006182 25006475 -225681379 + AluSc SINE Alu 1 293 -16 238 315 87 0 chr2 25006668 25006760 -225681094 - LTR67 LTR ERVL -293 264 165 813 264 17 30 chr2 25006766 25007061 -225680793 - L1M4 LINE L1 -2250 3896 3606 1100 172 48 131 chr2 25007164 25007319 -225680535 - AluJo SINE Alu -13 289 123 198 0 0 0 chr2 25007319 25007341 -225680513 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1977 121 0 27 chr2 25007348 25007646 -225680208 - AluSx SINE Alu -22 290 1 2232 87 0 20 chr2 25007649 25007949 -225679905 - AluSx SINE Alu -13 299 6 1100 172 48 131 chr2 25007949 25008095 -225679759 - AluJo SINE Alu -187 115 2 363 229 150 0 chr2 25008144 25008284 -225679570 - L1ME4a LINE L1 -223 5898 5738 2106 127 7 0 chr2 25009052 25009352 -225678502 - AluSx SINE Alu -10 302 1 186 43 0 0 chr2 25009755 25009778 -225678076 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 2142 105 20 0 chr2 25009786 25010082 -225677772 - AluSx SINE Alu -10 302 1 264 326 10 36 chr2 25010152 25010348 -225677506 + L1MC5 LINE L1 7587 7777 -184 183 235 20 20 chr2 25011854 25011905 -225675949 + MER5A DNA MER1_type 136 186 -3 2212 109 0 10 chr2 25011910 25012223 -225675631 - AluSx SINE Alu -2 310 1 1906 125 0 14 chr2 25013202 25013482 -225674372 - AluSx SINE Alu -36 276 1 1746 171 3 16 chr2 25013764 25014069 -225673785 - AluJb SINE Alu -3 309 9 2146 77 50 17 chr2 25015639 25015937 -225671917 + AluSq SINE Alu 1 308 -5 203 271 17 17 chr2 25016059 25016118 -225671736 - MER5B DNA MER1_type -17 161 103 * 273 228 38 13 chr2 25016065 25016144 -225671710 + MER5A DNA MER1_type 35 115 -74 635 282 43 27 chr2 25016418 25016606 -225671248 - MER91A DNA MER1_type -4 192 2 21 36 0 0 chr2 25018025 25018053 -225669801 + GC_rich Low_complexity Low_complexity 1 28 0 246 132 40 26 chr2 25018119 25018195 -225669659 + (CCCCG)n Simple_repeat Simple_repeat 5 81 0 704 264 158 18 chr2 25019070 25019354 -225668500 + MER5C DNA MER1_type 1 324 0 307 313 20 0 chr2 25020469 25020568 -225667286 + GA-rich Low_complexity Low_complexity 2 102 0 701 164 8 16 chr2 25020684 25020812 -225667042 + AluSg/x SINE Alu 180 306 -4 412 31 47 0 chr2 25021044 25021108 -225666746 - L1PB2 LINE L1 -2 6149 6083 2382 60 10 10 chr2 25021111 25021411 -225666443 - AluY SINE Alu -11 300 1 228 287 32 51 chr2 25021446 25021603 -225666251 - L1ME4a LINE L1 -366 5755 5602 1999 124 3 3 chr2 25022047 25022389 -225665465 + AluSx SINE Alu 1 342 0 2258 92 7 0 chr2 25022893 25023188 -225664666 - AluSp SINE Alu -16 297 1 1041 89 0 0 chr2 25023537 25023672 -225664182 - AluSq/x SINE Alu -178 135 1 180 0 0 0 chr2 25023815 25023835 -225664019 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1869 133 0 14 chr2 25023840 25024119 -225663735 - AluSx SINE Alu -37 275 1 348 361 137 17 chr2 25024315 25024783 -225663071 - L3 LINE CR1 -143 1434 911 260 250 0 0 chr2 25025307 25025347 -225662507 + A-rich Low_complexity Low_complexity 1 40 0 254 156 47 0 chr2 25026092 25026156 -225661698 + GA-rich Low_complexity Low_complexity 2 68 0 322 274 11 63 chr2 25027109 25027204 -225660650 - L1MC4 LINE L1 -1340 6702 6613 301 300 100 20 chr2 25027189 25027320 -225660534 - L1MCa LINE L1 -4340 2086 1940 * 2242 77 0 17 chr2 25027320 25027620 -225660234 + AluSx SINE Alu 1 295 -17 301 300 100 20 chr2 25027620 25027638 -225660216 - L1MCa LINE L1 -4486 1940 1925 29 28 0 0 chr2 25027658 25027694 -225660160 + AT_rich Low_complexity Low_complexity 1 36 0 1888 118 45 3 chr2 25027986 25028273 -225659581 - AluSx SINE Alu -13 299 1 235 272 23 100 chr2 25028281 25028453 -225659401 - MIR SINE MIR -52 210 51 743 116 25 8 chr2 25030002 25030123 -225657731 + FLAM_C SINE Alu 4 126 -7 2072 78 11 0 chr2 25030131 25030413 -225657441 - AluSp SINE Alu -1 312 28 310 362 20 40 chr2 25031002 25031154 -225656700 + L1MDa LINE L1 2448 2596 -3944 24 32 0 0 chr2 25031480 25031511 -225656343 + AT_rich Low_complexity Low_complexity 1 31 0 242 44 0 67 chr2 25036565 25036610 -225651244 + (A)n Simple_repeat Simple_repeat 1 42 0 182 188 0 0 chr2 25037420 25037452 -225650402 - L2 LINE L2 -26 3287 3256 2279 90 10 0 chr2 25037983 25038284 -225649570 - AluSx SINE Alu -8 304 1 2291 84 3 0 chr2 25038867 25039164 -225648690 - AluSx SINE Alu -14 298 1 343 257 30 10 chr2 25040157 25040258 -225647596 + L1ME1 LINE L1 6020 6122 -44 2169 102 10 0 chr2 25040285 25040579 -225647275 + AluSx SINE Alu 1 297 -15 765 197 138 37 chr2 25042216 25042404 -225645450 + MER3 DNA MER1_type 1 207 -2 666 183 0 0 chr2 25044064 25044168 -225643686 - AluJb SINE Alu -208 104 1 402 271 86 56 chr2 25045624 25045821 -225642033 + L1ME4a LINE L1 5619 5809 -312 2178 89 21 0 chr2 25045821 25046112 -225641742 + AluSg SINE Alu 1 297 -13 402 271 86 56 chr2 25046112 25046287 -225641567 + L1ME4a LINE L1 5809 6002 -119 2230 109 7 0 chr2 25051341 25051644 -225636210 - AluSx SINE Alu -7 305 1 1170 33 0 20 chr2 25051666 25051816 -225636038 - L1PA4 LINE L1 -3 6152 6006 639 134 80 27 chr2 25051928 25052040 -225635814 + FLAM_A SINE Alu 13 130 -12 233 282 0 39 chr2 25053920 25054023 -225633831 + G-rich Low_complexity Low_complexity 3 101 0 305 263 0 0 chr2 25055071 25055151 -225632703 + G-rich Low_complexity Low_complexity 1 80 0 21 0 0 0 chr2 25055280 25055301 -225632553 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 25055406 25055427 -225632427 + GC_rich Low_complexity Low_complexity 1 21 0 260 259 69 61 chr2 25056568 25056586 -225631268 + MIR SINE MIR 39 55 -163 2374 87 0 0 chr2 25056586 25056886 -225630968 + AluSg SINE Alu 1 300 -10 260 259 69 61 chr2 25056886 25056985 -225630869 + MIR SINE MIR 55 155 -63 230 337 39 22 chr2 25059082 25059251 -225628603 + L2 LINE L2 2884 3058 -214 969 198 88 5 chr2 25059251 25059443 -225628411 - MER3 DNA MER1_type -1 208 1 232 324 0 0 chr2 25059456 25059527 -225628327 + CT-rich Low_complexity Low_complexity 3 73 0 189 326 72 43 chr2 25059604 25059742 -225628112 + L2 LINE L2 3165 3306 -7 376 296 92 33 chr2 25060484 25060636 -225627218 - MER5B DNA MER1_type -12 166 6 194 129 0 0 chr2 25060658 25060689 -225627165 - MIR SINE MIR -69 139 109 294 331 145 18 chr2 25063068 25063234 -225624620 - MER5A DNA MER1_type -2 187 1 1053 118 0 33 chr2 25063661 25063814 -225624040 + FRAM SINE Alu 4 151 -25 2175 102 0 31 chr2 25063822 25063967 -225623887 + AluSx SINE Alu 1 149 -163 2370 99 0 0 chr2 25063967 25064271 -225623583 + AluSx SINE Alu 1 304 -8 2175 102 0 31 chr2 25064271 25064447 -225623407 + AluSx SINE Alu 149 312 0 2200 102 0 16 chr2 25064715 25065019 -225622835 + AluSc SINE Alu 1 299 -10 417 185 68 34 chr2 25065097 25065243 -225622611 + L1MC4a LINE L1 5051 5201 -945 1425 157 99 4 chr2 25065761 25066023 -225621831 - AluJo SINE Alu -2 310 24 229 354 102 0 chr2 25066166 25066293 -225621561 + L2 LINE L2 3088 3227 -45 2216 121 0 0 chr2 25066943 25067250 -225620604 - AluSx SINE Alu -5 307 1 2345 60 17 0 chr2 25067273 25067572 -225620282 - AluY SINE Alu -7 304 1 345 357 21 7 chr2 25067750 25067893 -225619961 - MIR3 SINE MIR -34 174 30 2271 91 3 3 chr2 25068347 25068645 -225619209 + AluSx SINE Alu 1 298 -14 209 262 0 0 chr2 25068690 25068732 -225619122 + L2 LINE L2 3211 3252 -20 202 287 98 49 chr2 25069207 25069350 -225618504 + L2 LINE L2 3159 3308 -5 760 304 161 8 chr2 25069468 25069991 -225617863 + L1MC4a LINE L1 5344 5801 -363 1834 165 3 3 chr2 25070102 25070393 -225617461 + AluJo SINE Alu 1 291 -21 193 281 94 0 chr2 25070561 25070625 -225617229 - L2 LINE L2 -1 3271 3202 235 190 79 65 chr2 25070713 25070798 -225617056 - MIR SINE MIR -52 156 70 1889 140 7 23 chr2 25071852 25072152 -225615702 + AluSx SINE Alu 3 297 -15 198 324 0 67 chr2 25072160 25072265 -225615589 - L2 LINE L2 -173 3099 3002 216 185 62 77 chr2 25073034 25073099 -225614755 - MIR3 SINE MIR -2 206 143 31 0 0 0 chr2 25074671 25074702 -225613152 + GC_rich Low_complexity Low_complexity 1 31 0 2131 95 7 0 chr2 25074813 25075098 -225612756 + AluSg SINE Alu 24 310 0 2093 107 7 17 chr2 25077547 25077847 -225610007 + AluSx SINE Alu 1 297 -15 1191 87 6 46 chr2 25077847 25078020 -225609834 + AluSg/x SINE Alu 132 297 -13 225 0 0 0 chr2 25078495 25078520 -225609334 + (A)n Simple_repeat Simple_repeat 1 25 0 393 294 34 20 chr2 25080214 25080360 -225607494 - MIR SINE MIR -113 149 2 288 313 0 27 chr2 25081395 25081507 -225606347 + L2 LINE L2 2981 3089 -183 2424 69 0 3 chr2 25082430 25082734 -225605120 - AluSx SINE Alu -9 303 1 395 289 110 43 chr2 25082851 25083079 -225604775 - MIR SINE MIR -19 243 3 231 235 103 15 chr2 25084847 25084915 -225602939 + MIR SINE MIR 16 89 -119 236 311 164 33 chr2 25086036 25086280 -225601574 + L2 LINE L2 2992 3267 -5 330 373 47 26 chr2 25086304 25086497 -225601357 + L3b LINE CR1 1304 1500 -83 436 301 33 7 chr2 25086598 25086751 -225601103 - MIR SINE MIR -41 221 65 1117 60 0 0 chr2 25088970 25089103 -225598751 + AluSx SINE Alu 1 133 -179 444 99 0 14 chr2 25089107 25089178 -225598676 + MER51B LTR ERV1 212 281 -96 1256 132 0 0 chr2 25089187 25089377 -225598477 + AluSx SINE Alu 123 312 0 306 405 23 0 chr2 25089621 25089794 -225598060 - L3 LINE CR1 -342 1235 1059 1037 160 18 0 chr2 25090489 25090658 -225597196 - AluJb SINE Alu -14 298 127 1825 147 10 3 chr2 25090675 25090967 -225596887 - AluSx SINE Alu -18 294 1 188 405 41 0 chr2 25091102 25091223 -225596631 + L2 LINE L2 2956 3081 -191 341 250 16 73 chr2 25092693 25092817 -225595037 + MIR SINE MIR 96 212 -50 239 296 0 61 chr2 25092922 25093020 -225594834 - MER5C DNA MER1_type 0 324 233 186 236 91 0 chr2 25093110 25093165 -225594689 + MER5C DNA MER1_type 2 61 -263 2368 85 3 0 chr2 25094498 25094803 -225593051 - AluSx SINE Alu -6 306 1 334 264 46 0 chr2 25094859 25094946 -225592908 - MIR SINE MIR -99 163 73 405 340 62 6 chr2 25095064 25095226 -225592628 - MIR SINE MIR -72 190 20 194 357 188 0 chr2 25096528 25096640 -225591214 + MIR SINE MIR 18 150 -58 2301 109 0 0 chr2 25096642 25096954 -225590900 + AluSx SINE Alu 1 312 0 395 311 23 47 chr2 25097378 25097453 -225590401 - L1MC4 LINE L1 -153 7808 7733 914 121 0 0 chr2 25097453 25097577 -225590277 + FLAM_C SINE Alu 1 124 -9 395 311 23 47 chr2 25097577 25097773 -225590081 - L1MC4 LINE L1 -228 7733 6608 2154 103 10 10 chr2 25097983 25098293 -225589561 + AluY SINE Alu 2 311 0 279 139 0 0 chr2 25099924 25099967 -225587887 + MIR SINE MIR 106 148 -114 321 206 0 27 chr2 25100009 25100082 -225587772 + L2 LINE L2 3201 3271 -42 399 354 0 8 chr2 25100894 25101024 -225586830 + L3 LINE CR1 618 746 -831 32 43 0 0 chr2 25101456 25101502 -225586352 + GC_rich Low_complexity Low_complexity 1 46 0 482 270 44 19 chr2 25101899 25102058 -225585796 + L3 LINE CR1 1407 1569 -8 248 241 230 0 chr2 25102774 25102861 -225584993 + L2 LINE L2 3161 3267 -5 618 265 157 10 chr2 25103018 25103222 -225584632 - MIR SINE MIR 0 262 29 1846 160 0 10 chr2 25103235 25103542 -225584312 - AluJo SINE Alu -8 304 1 2247 100 3 0 chr2 25103591 25103891 -225583963 + AluSx SINE Alu 5 305 -7 415 114 14 0 chr2 25104296 25104366 -225583488 - MLT1I LTR MaLR -8 401 331 3321 123 37 78 chr2 25104366 25104497 -225583357 + L1MB3 LINE L1 5566 5701 -482 2278 105 0 0 chr2 25104497 25104803 -225583051 - AluSq SINE Alu -7 306 1 3321 123 37 78 chr2 25104803 25105258 -225582596 + L1MB3 LINE L1 5701 6173 -10 2345 74 0 0 chr2 25105258 25105556 -225582298 + AluY SINE Alu 1 298 -13 2190 111 0 0 chr2 25105559 25105856 -225581998 + AluSq SINE Alu 3 299 -14 2274 76 0 3 chr2 25105856 25106147 -225581707 + AluSc SINE Alu 1 290 -19 3321 123 37 78 chr2 25106147 25106198 -225581656 + L1MB3 LINE L1 6173 6183 0 253 214 36 150 chr2 25106230 25106370 -225581484 - MLT1I LTR MaLR -54 355 232 295 238 99 10 chr2 25106424 25106525 -225581329 - MLT1I LTR MaLR -299 110 1 304 276 32 77 chr2 25107128 25107284 -225580570 - MLT1K LTR MaLR -163 425 277 195 42 0 0 chr2 25107400 25107424 -225580430 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 245 296 12 0 chr2 25107463 25107544 -225580310 - MLT1K LTR MaLR -324 264 183 2257 97 0 3 chr2 25107738 25108047 -225579807 - AluSc SINE Alu -1 308 1 544 211 0 44 chr2 25108047 25108204 -225579650 + L1MB5 LINE L1 6040 6184 0 2447 229 90 57 chr2 25109093 25109351 -225578503 + L1MC4 LINE L1 6637 6885 -900 2393 142 31 68 chr2 25109351 25109686 -225578168 + MSTB1 LTR MaLR 5 322 -110 2184 126 7 0 chr2 25109686 25109996 -225577858 - AluSx SINE Alu 0 312 1 2393 142 31 68 chr2 25109996 25110104 -225577750 + MSTB1 LTR MaLR 322 432 0 2447 229 90 57 chr2 25110104 25110730 -225577124 + L1MC4 LINE L1 6885 7489 -296 2249 108 0 6 chr2 25110730 25111044 -225576810 + AluSx SINE Alu 1 312 0 2447 229 90 57 chr2 25111044 25111085 -225576769 + L1MC4 LINE L1 7489 7527 -258 2214 98 7 3 chr2 25111085 25111391 -225576463 + AluSc SINE Alu 3 309 0 2447 229 90 57 chr2 25111391 25111462 -225576392 + L1MC4 LINE L1 7527 7649 -136 260 164 0 0 chr2 25111478 25111533 -225576321 + L1MC4 LINE L1 7988 8042 0 * 673 246 175 4 chr2 25111531 25111799 -225576055 - L1MC/D LINE L1 -2230 5578 5265 1588 199 98 62 chr2 25112175 25112464 -225575390 - L1MD1 LINE L1 0 6242 5965 2410 74 0 16 chr2 25112464 25112776 -225575078 + AluY SINE Alu 1 307 -4 2147 128 0 3 chr2 25112785 25113098 -225574756 + AluSx SINE Alu 1 312 0 1588 199 98 62 chr2 25113098 25113317 -225574537 - L1MD1 LINE L1 -284 5958 5705 2217 87 0 45 chr2 25113589 25113900 -225573954 + AluSx SINE Alu 1 297 -15 1653 227 128 42 chr2 25114287 25114833 -225573021 - MLT1E LTR MaLR 0 593 1 1666 162 61 82 chr2 25115631 25116003 -225571851 + MSTA LTR MaLR 13 391 -37 2182 102 0 0 chr2 25116003 25116319 -225571535 - AluSx SINE Alu 0 316 1 2203 112 0 3 chr2 25116325 25116637 -225571217 - AluY SINE Alu 0 311 1 1666 162 61 82 chr2 25116637 25116681 -225571173 + MSTA LTR MaLR 396 428 0 1200 205 31 87 chr2 25116702 25116908 -225570946 + MLT1D LTR MaLR 1 176 -329 2247 106 3 0 chr2 25116908 25117211 -225570643 + AluSx SINE Alu 1 304 -8 1200 205 31 87 chr2 25117211 25117394 -225570460 + MLT1D LTR MaLR 176 368 -137 361 322 33 10 chr2 25117432 25117593 -225570261 + MIR3 SINE MIR 13 176 -78 201 311 68 10 chr2 25117759 25117862 -225569992 - MIR SINE MIR -57 151 43 201 308 22 33 chr2 25117915 25118006 -225569848 + MIR3 SINE MIR 5 94 -114 249 337 54 0 chr2 25118007 25118099 -225569755 + MIR SINE MIR 150 246 -16 2150 119 0 3 chr2 25118235 25118546 -225569308 - AluSg SINE Alu 0 310 1 185 277 234 0 chr2 25118563 25118657 -225569197 - MIR SINE MIR -65 143 28 1269 77 0 0 chr2 25119888 25120044 -225567810 + AluSp SINE Alu 129 284 -29 1570 147 10 34 chr2 25120101 25120393 -225567461 + AluSq SINE Alu 21 305 -8 182 325 26 61 chr2 25120558 25120672 -225567182 + MIR SINE MIR 36 145 -63 278 213 43 43 chr2 25120914 25121008 -225566846 + L1MC5 LINE L1 7832 7925 -36 2210 102 0 0 chr2 25121013 25121307 -225566547 - AluSx SINE Alu -18 294 1 1044 151 33 142 chr2 25121820 25122033 -225565821 - AluSg SINE Alu 0 300 136 2329 91 0 3 chr2 25122033 25122340 -225565514 - AluSq SINE Alu -7 306 1 1044 151 33 142 chr2 25122340 25122463 -225565391 - AluSg SINE Alu -164 136 1 515 312 214 18 chr2 25122724 25123393 -225564461 + L2 LINE L2 1804 2603 -711 703 310 190 18 chr2 25123394 25123867 -225563987 + L2 LINE L2 2731 3272 0 235 313 72 0 chr2 25124733 25124816 -225563038 - L2 LINE L2 -5 3308 3220 424 265 34 8 chr2 25125143 25125260 -225562594 + MIR3 SINE MIR 88 207 -1 259 284 197 8 chr2 25125360 25125487 -225562367 + MIR SINE MIR 105 255 -7 312 264 165 60 chr2 25126739 25126921 -225560933 - MIR3 SINE MIR -6 202 2 390 21 0 0 chr2 25127061 25127108 -225560746 + (CA)n Simple_repeat Simple_repeat 1 47 0 441 270 0 10 chr2 25127497 25127597 -225560257 + MIR SINE MIR 58 156 -106 2118 120 0 13 chr2 25127603 25127904 -225559950 + AluSx SINE Alu 1 297 -15 439 278 199 0 chr2 25127942 25128093 -225559761 - MER5A DNA MER1_type 0 189 9 2095 131 0 13 chr2 25128738 25129050 -225558804 - AluSx SINE Alu -4 308 1 291 85 0 0 chr2 25129352 25129399 -225558455 + (C)n Simple_repeat Simple_repeat 1 47 0 385 320 24 48 chr2 25129647 25129853 -225558001 + L2 LINE L2 3111 3311 -2 362 339 36 23 chr2 25130265 25130483 -225557371 + MIR SINE MIR 35 255 -7 181 284 156 28 chr2 25130649 25130758 -225557096 + MIR SINE MIR 136 258 -4 739 279 42 48 chr2 25131036 25131366 -225556488 - MER102b DNA MER1_type 0 341 14 2155 113 7 0 chr2 25132140 25132442 -225555412 + AluSx SINE Alu 1 304 -8 219 342 18 11 chr2 25132938 25133073 -225554781 - MIR SINE MIR -72 136 2 199 277 17 6 chr2 25133277 25133342 -225554512 + MIR SINE MIR 93 159 -49 302 266 51 0 chr2 25133369 25133423 -225554431 - L1ME4a LINE L1 0 6121 6060 2078 119 26 26 chr2 25133423 25133734 -225554120 + AluSx SINE Alu 1 311 -1 302 266 51 0 chr2 25133734 25133758 -225554096 - L1ME4a LINE L1 -61 6060 6039 431 293 223 0 chr2 25133936 25134236 -225553618 - L1MC4a LINE L1 -1878 5930 5564 189 0 0 0 chr2 25134412 25134433 -225553421 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 183 314 16 91 chr2 25135955 25136076 -225551778 + L2 LINE L2 3186 3297 -16 931 161 50 55 chr2 25136632 25136850 -225551004 + MER20 DNA MER1_type 3 219 0 2153 109 7 3 chr2 25136898 25137192 -225550662 - AluSq SINE Alu -18 295 1 752 175 131 8 chr2 25137222 25137454 -225550400 - L1MB3 LINE L1 -7 6173 5915 2301 68 17 0 chr2 25137689 25137982 -225549872 - AluSx SINE Alu -14 298 1 1024 194 18 127 chr2 25138547 25138887 -225548967 - AluJo SINE Alu -9 303 1 1835 109 3 25 chr2 25138903 25139186 -225548668 - AluSx SINE Alu -12 300 24 323 287 171 8 chr2 25139320 25139449 -225548405 + MIR SINE MIR 103 252 -10 247 339 173 36 chr2 25139829 25140136 -225547718 + L2 LINE L2 2911 3259 -13 289 303 31 71 chr2 25140537 25140755 -225547099 - MIR3 SINE MIR -50 212 3 183 267 89 33 chr2 25141520 25141610 -225546244 + L2 LINE L2 3162 3256 -16 249 159 23 0 chr2 25142075 25142119 -225545735 + MIR SINE MIR 105 149 -113 641 199 64 21 chr2 25142373 25142514 -225545340 - AluSx SINE Alu -159 153 7 2194 115 3 0 chr2 25142522 25142827 -225545027 - AluSq SINE Alu -7 306 1 348 127 0 0 chr2 25143222 25143277 -225544577 + (TAGG)n Simple_repeat Simple_repeat 4 58 0 333 68 0 0 chr2 25144028 25144072 -225543782 + (CA)n Simple_repeat Simple_repeat 1 44 0 274 274 21 32 chr2 25144327 25144422 -225543432 + GA-rich Low_complexity Low_complexity 2 95 0 640 265 32 60 chr2 25144650 25144834 -225543020 + MIR SINE MIR 20 197 -65 2191 71 14 20 chr2 25144834 25145131 -225542723 + AluY SINE Alu 1 295 -16 640 265 32 60 chr2 25145131 25145195 -225542659 + MIR SINE MIR 197 261 -1 204 313 94 10 chr2 25145705 25145801 -225542053 - L2 LINE L2 -1 3312 3209 732 201 103 17 chr2 25145832 25146006 -225541848 - MER5A DNA MER1_type 0 189 1 203 130 0 22 chr2 25146172 25146218 -225541636 + (CGGGGG)n Simple_repeat Simple_repeat 2 46 0 406 298 71 61 chr2 25146769 25146967 -225540887 - MIR SINE MIR -57 205 6 194 209 77 0 chr2 25147681 25147745 -225540109 + MIR SINE MIR 116 185 -77 249 346 10 10 chr2 25148580 25148681 -225539173 - MIR SINE MIR -76 132 32 220 295 338 0 chr2 25148732 25148871 -225538983 + MIR SINE MIR 6 191 -71 197 298 0 0 chr2 25151041 25151088 -225536766 + MIR3 SINE MIR 109 155 -53 455 293 221 49 chr2 25152057 25152110 -225535744 + HAL1 LINE L1 24 67 -2440 1695 161 7 20 chr2 25152110 25152415 -225535439 - AluJo SINE Alu -11 301 1 455 293 221 49 chr2 25152415 25152785 -225535069 + HAL1 LINE L1 67 372 -2135 2288 83 7 0 chr2 25152785 25153087 -225534767 - AluSp SINE Alu -9 304 1 455 293 221 49 chr2 25153087 25153331 -225534523 + HAL1 LINE L1 372 807 -1700 2150 115 3 0 chr2 25153334 25153639 -225534215 - AluSx SINE Alu -6 306 1 325 230 225 50 chr2 25153667 25153740 -225534114 + HAL1 LINE L1 1567 1626 -881 2381 87 0 6 chr2 25153740 25154052 -225533802 - AluY SINE Alu -1 310 1 2441 78 0 0 chr2 25154056 25154365 -225533489 - AluY SINE Alu 0 311 3 982 103 0 22 chr2 25154367 25154503 -225533351 - AluJo/FLAM SINE Alu -169 133 1 325 230 225 50 chr2 25154503 25154643 -225533211 + HAL1 LINE L1 1628 1827 -680 2215 119 0 0 chr2 25154812 25155123 -225532731 - AluSx SINE Alu -1 311 1 583 243 61 120 chr2 25155156 25155424 -225532430 + HAL1 LINE L1 1697 1922 -585 1031 117 0 0 chr2 25155424 25155569 -225532285 + L1MA6 LINE L1 6156 6300 0 583 243 61 120 chr2 25155569 25155807 -225532047 + HAL1 LINE L1 1922 2173 -334 198 167 0 0 chr2 25155810 25155846 -225532008 + (TATG)n Simple_repeat Simple_repeat 3 38 0 2066 149 18 59 chr2 25155867 25155903 -225531951 - MLT1D LTR MaLR -32 473 437 2338 71 0 3 chr2 25155903 25156198 -225531656 + AluSp SINE Alu 1 294 -19 2066 149 18 59 chr2 25156198 25156652 -225531202 - MLT1D LTR MaLR -68 437 3 1590 178 56 0 chr2 25156672 25156959 -225530895 + AluJo SINE Alu 1 303 -9 661 245 68 13 chr2 25157040 25157277 -225530577 + HAL1 LINE L1 2258 2507 0 180 227 227 0 chr2 25157350 25157416 -225530438 + MIR3 SINE MIR 117 197 -11 382 260 156 12 chr2 25158153 25158326 -225529528 + MLT1K LTR MaLR 211 408 -180 625 293 80 5 chr2 25158499 25158711 -225529143 + MIR SINE MIR 35 262 0 738 217 6 44 chr2 25158803 25159009 -225528845 - MIR SINE MIR -18 244 46 748 246 62 9 chr2 25159249 25159460 -225528394 - MIR SINE MIR -13 249 28 1187 308 26 45 chr2 25160590 25161145 -225526709 + ERVL LTR ERVL 4813 5399 -153 410 0 20 0 chr2 25161161 25161211 -225526643 + (TG)n Simple_repeat Simple_repeat 2 52 0 1875 212 55 130 chr2 25161519 25162355 -225525499 + LTR41 LTR ERVL 1 773 0 459 75 62 0 chr2 25163182 25163262 -225524592 + L1MB8 LINE L1 6089 6173 -5 412 266 167 26 chr2 25163965 25164157 -225523697 - MIR SINE MIR -43 219 1 547 159 29 72 chr2 25165701 25165839 -225522015 + AluJ SINE Alu 2 133 -169 2052 108 0 0 chr2 25165859 25166118 -225521736 + AluSg SINE Alu 1 259 -51 1096 182 0 30 chr2 25166187 25166385 -225521469 + AluJ SINE Alu 120 311 -1 2322 110 0 0 chr2 25166920 25167219 -225520635 - AluSx SINE Alu -13 299 1 517 275 39 11 chr2 25167430 25167608 -225520246 - Charlie8 DNA MER1_type -2198 219 37 493 154 0 0 chr2 25168146 25168224 -225519630 - AluS SINE Alu -13 297 220 2059 92 0 8 chr2 25168227 25168488 -225519366 - AluSq SINE Alu -54 259 1 4403 108 46 42 chr2 25170187 25170963 -225516891 + MER4E LTR ERV1 1 779 0 261 0 0 0 chr2 25171516 25171545 -225516309 + (T)n Simple_repeat Simple_repeat 1 29 0 876 222 11 0 chr2 25175099 25175284 -225512570 + MER5A DNA MER1_type 3 189 0 23 33 0 0 chr2 25176700 25176730 -225511124 + GC_rich Low_complexity Low_complexity 1 30 0 183 205 0 0 chr2 25181016 25181055 -225506799 + (TG)n Simple_repeat Simple_repeat 2 40 0 2022 153 14 0 chr2 25181212 25181506 -225506348 - AluJo SINE Alu -14 298 1 337 207 155 9 chr2 25182110 25182226 -225505628 - L2 LINE L2 -19 3294 3162 350 253 124 67 chr2 25182283 25182351 -225505503 + MIR SINE MIR 2 65 -197 2466 94 0 0 chr2 25182351 25182660 -225505194 - AluSx SINE Alu -3 309 1 350 253 124 67 chr2 25182660 25182785 -225505069 + MIR SINE MIR 65 206 -56 2320 96 6 16 chr2 25183036 25183350 -225504504 - AluSq SINE Alu -2 311 1 1011 325 59 28 chr2 25184039 25184697 -225503157 + L3 LINE CR1 809 1554 -23 2344 111 7 0 chr2 25184698 25185005 -225502849 - AluSx SINE Alu 0 312 4 369 303 65 7 chr2 25185414 25185569 -225502285 + MIR3 SINE MIR 40 203 -5 249 33 0 0 chr2 25188632 25188662 -225499192 + (TG)n Simple_repeat Simple_repeat 2 31 0 2034 132 3 3 chr2 25188685 25188974 -225498880 - AluSx SINE Alu -23 289 1 199 264 121 11 chr2 25188976 25189067 -225498787 - MIR SINE MIR -103 159 59 384 22 0 0 chr2 25189672 25189717 -225498137 + (TG)n Simple_repeat Simple_repeat 2 46 0 229 150 67 0 chr2 25190123 25190183 -225497671 + L1M4 LINE L1 4987 5050 -1096 2120 137 3 13 chr2 25190259 25190574 -225497280 - AluSx SINE Alu 0 312 1 1633 176 35 14 chr2 25190608 25190723 -225497131 + L1M4 LINE L1 4973 5084 -1090 2563 67 0 0 chr2 25190723 25191023 -225496831 - AluY SINE Alu -11 300 1 1633 176 35 14 chr2 25191023 25191486 -225496368 + L1M4 LINE L1 5084 5557 -617 * 11433 178 19 4 chr2 25191484 25191954 -225495900 + L1PB1 LINE L1 2722 3183 -2968 2279 91 0 3 chr2 25191954 25192240 -225495614 + AluSx SINE Alu 1 285 -27 300 53 0 0 chr2 25192240 25192278 -225495576 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 11433 178 19 4 chr2 25192278 25193469 -225494385 + L1PB1 LINE L1 3183 4354 -1797 234 0 0 0 chr2 25193469 25193495 -225494359 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 11433 178 19 4 chr2 25193495 25195214 -225492640 + L1PB1 LINE L1 4354 6151 0 243 200 12 38 chr2 25195232 25195312 -225492542 + (TA)n Simple_repeat Simple_repeat 1 78 0 339 279 58 10 chr2 25195328 25195432 -225492422 + L1MC4 LINE L1 6603 6711 -1331 1957 75 4 0 chr2 25195808 25196075 -225491779 + L1PB1 LINE L1 5706 5973 -178 2081 131 0 3 chr2 25196075 25196365 -225491489 + AluSx SINE Alu 21 309 -3 1104 154 0 0 chr2 25196365 25196527 -225491327 + AluSg/x SINE Alu 132 293 -17 258 81 0 0 chr2 25197143 25197180 -225490674 + (CA)n Simple_repeat Simple_repeat 1 37 0 2586 59 0 7 chr2 25197212 25197518 -225490336 - AluY SINE Alu -7 304 1 655 289 157 32 chr2 25197771 25198001 -225489853 + L2 LINE L2 2243 2443 -870 2330 110 0 3 chr2 25198001 25198309 -225489545 - AluSx SINE Alu -5 307 1 655 289 157 32 chr2 25198309 25198510 -225489344 + L2 LINE L2 2443 2617 -696 954 54 78 0 chr2 25198510 25198639 -225489215 + MER85 DNA T2_type 1 139 0 655 289 157 32 chr2 25198639 25198662 -225489192 + L2 LINE L2 2617 2636 -677 1974 166 0 0 chr2 25198662 25198963 -225488891 + AluJb SINE Alu 3 303 -9 655 289 157 32 chr2 25198963 25199231 -225488623 + L2 LINE L2 2636 3072 -241 535 147 21 0 chr2 25199231 25199326 -225488528 - AluJ SINE Alu -5 307 211 896 99 20 80 chr2 25199326 25199477 -225488377 - AluJ SINE Alu -170 142 1 330 275 88 39 chr2 25199488 25199670 -225488184 + L2 LINE L2 3089 3279 -34 202 240 308 0 chr2 25199696 25199800 -225488054 - MIR SINE MIR -4 258 123 184 250 163 0 chr2 25200029 25200121 -225487733 + MIR3 SINE MIR 4 110 -98 320 261 98 26 chr2 25200451 25200604 -225487250 + L2 LINE L2 3084 3247 -66 1909 152 14 0 chr2 25200867 25201163 -225486691 - AluJb SINE Alu -12 300 1 342 246 109 18 chr2 25201247 25201357 -225486497 - MIR SINE MIR -49 213 94 338 248 55 83 chr2 25201582 25201836 -225486018 - L1ME4a LINE L1 -58 6063 5817 944 202 13 70 chr2 25201845 25202073 -225485781 - AluJo SINE Alu -15 297 83 2443 95 0 0 chr2 25202085 25202390 -225485464 - AluSq SINE Alu -8 305 1 266 241 23 23 chr2 25202390 25202477 -225485377 - L1ME4a LINE L1 -292 5829 5743 1120 135 0 27 chr2 25202512 25202697 -225485157 - AluJb SINE Alu -1 311 132 1530 66 6 0 chr2 25202717 25202900 -225484954 + AluSp SINE Alu 1 184 -129 300 53 0 0 chr2 25203021 25203059 -225484795 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 9795 170 19 0 chr2 25203059 25204250 -225483604 + L1PB1 LINE L1 3193 4361 -1790 234 0 0 0 chr2 25204250 25204276 -225483578 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 9795 170 19 0 chr2 25204276 25205995 -225481859 + L1PB1 LINE L1 4361 6151 0 243 200 12 38 chr2 25206013 25206093 -225481761 + (TA)n Simple_repeat Simple_repeat 1 78 0 339 279 58 10 chr2 25206109 25206213 -225481641 + L1MC4 LINE L1 6603 6711 -1331 3016 71 9 43 chr2 25206590 25206857 -225480997 + L1PB1 LINE L1 5706 5952 -199 2073 135 0 0 chr2 25206857 25207139 -225480715 + AluSx SINE Alu 21 302 -10 3016 71 9 43 chr2 25207139 25207333 -225480521 + L1PB1 LINE L1 5952 6151 0 207 0 0 0 chr2 25207340 25207363 -225480491 + (A)n Simple_repeat Simple_repeat 1 23 0 716 151 16 8 chr2 25207671 25207829 -225480025 + L1MB8 LINE L1 5595 5748 -416 926 153 0 0 chr2 25207829 25207973 -225479881 + AluSg/x SINE Alu 164 307 -3 570 191 9 9 chr2 25207996 25208111 -225479743 + L1MB8 LINE L1 5875 5989 -189 2380 101 7 0 chr2 25208206 25208513 -225479341 + AluSx SINE Alu 1 309 -3 185 220 20 40 chr2 25209499 25209549 -225478305 + L2 LINE L2 3264 3312 -1 2317 82 7 14 chr2 25209666 25209958 -225477896 - AluSc SINE Alu -19 290 1 1933 146 24 0 chr2 25209958 25210246 -225477608 - AluSx SINE Alu -17 295 1 347 189 68 10 chr2 25210290 25210404 -225477450 + MLT1F1 LTR MaLR 1 116 -451 330 241 125 9 chr2 25211644 25211756 -225476098 - MIR3 SINE MIR -49 159 35 192 219 0 0 chr2 25212167 25212208 -225475646 + L2 LINE L2 3255 3295 -18 2340 89 0 0 chr2 25213732 25214023 -225473831 - AluSx SINE Alu -21 291 1 668 183 48 81 chr2 25214358 25214405 -225473449 + MIR SINE MIR 5 52 -210 762 181 0 0 chr2 25214405 25214538 -225473316 - FLAM_A SINE Alu 0 133 1 668 183 48 81 chr2 25214538 25214676 -225473178 + MIR SINE MIR 52 184 -78 2373 95 0 0 chr2 25215180 25215476 -225472378 + AluSq SINE Alu 1 296 -17 1735 158 54 30 chr2 25215538 25215835 -225472019 - AluJb SINE Alu -8 304 1 2091 114 7 0 chr2 25215866 25216166 -225471688 + AluSx SINE Alu 1 302 0 438 196 131 19 chr2 25216220 25216373 -225471481 + MER58 DNA MER1_type 50 2420 0 319 242 16 0 chr2 25216876 25216938 -225470916 + MER20 DNA MER1_type 79 141 -78 1825 60 0 14 chr2 25216941 25217159 -225470695 + AluSp SINE Alu 86 300 -13 284 97 0 161 chr2 25217159 25217221 -225470633 + AluSg/x SINE Alu 76 127 -173 242 312 0 13 chr2 25217230 25217307 -225470547 + MER20 DNA MER1_type 138 213 -6 29 47 0 0 chr2 25217591 25217634 -225470220 + AT_rich Low_complexity Low_complexity 1 43 0 5605 118 11 4 chr2 25217716 25218539 -225469315 + L1PB3 LINE L1 5326 6154 0 385 148 0 0 chr2 25218575 25218629 -225469225 + AluSx SINE Alu 32 85 -217 2293 104 0 10 chr2 25218630 25218928 -225468926 + AluSp SINE Alu 1 295 -18 1665 111 0 37 chr2 25218928 25219170 -225468684 + AluSx SINE Alu 71 305 -5 330 26 0 0 chr2 25219834 25219873 -225467981 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 282 376 43 25 chr2 25220410 25220692 -225467162 + L2 LINE L2 2198 2484 -830 629 242 27 0 chr2 25221042 25221191 -225466663 + LTR23-int LTR ERV1 4971 5123 0 1257 172 26 4 chr2 25221192 25221424 -225466430 + LTR23 LTR ERV1 1 237 -200 328 114 0 0 chr2 25221442 25221486 -225466368 - MER4E LTR ERV1 -70 696 653 956 129 17 39 chr2 25221487 25221665 -225466189 + LTR23 LTR ERV1 226 399 -38 2368 105 0 0 chr2 25221683 25221989 -225465865 + AluSq SINE Alu 1 306 -7 7504 34 14 0 chr2 25223877 25224855 -225462999 - L1PA5 LINE L1 -3 6151 5183 2316 88 7 7 chr2 25224855 25225160 -225462694 - AluY SINE Alu -6 305 1 361 275 22 0 chr2 25225340 25225431 -225462423 - L2 LINE L2 -6 3266 3174 1231 174 11 76 chr2 25225786 25225848 -225462006 + MER21B LTR ERV1 1 65 -798 1762 95 0 0 chr2 25225848 25226069 -225461785 - AluSg/x SINE Alu -7 305 85 1231 174 11 76 chr2 25226069 25226270 -225461584 + MER21B LTR ERV1 65 247 -616 345 256 56 24 chr2 25226371 25226496 -225461358 + L1MEc LINE L1 931 1059 -5662 1503 266 61 35 chr2 25226508 25227240 -225460614 + L1MEc LINE L1 1666 2463 -4258 1105 275 8 5 chr2 25227245 25227619 -225460235 + L1MEc LINE L1 2687 3061 -3479 229 154 0 0 chr2 25227700 25227739 -225460115 + L1MEc LINE L1 3077 3115 -3425 1944 110 53 7 chr2 25228193 25228475 -225459379 - AluSg SINE Alu -15 295 1 261 358 50 27 chr2 25228966 25229187 -225458667 + MIR SINE MIR 18 243 -19 542 147 63 11 chr2 25229407 25229502 -225458352 - THE1C LTR MaLR -275 100 1 397 336 83 6 chr2 25229520 25229871 -225457983 - L1ME LINE L1 -365 5756 5379 295 324 87 0 chr2 25229899 25230072 -225457782 - MIR SINE MIR -13 249 62 203 354 135 0 chr2 25230922 25231018 -225456836 + L2 LINE L2 3155 3263 -9 884 164 77 72 chr2 25231999 25232207 -225455647 + MER58A DNA MER1_type 1 209 -15 1703 179 16 35 chr2 25232388 25232706 -225455148 + AluJo SINE Alu 1 312 0 2038 124 0 41 chr2 25233316 25233630 -225454224 + AluSx SINE Alu 1 301 -11 2241 121 0 10 chr2 25234341 25234648 -225453206 + AluSx SINE Alu 1 304 -8 2449 234 42 28 chr2 25235020 25235671 -225452183 + MER21B LTR ERV1 156 815 -48 2164 110 20 0 chr2 25235839 25236131 -225451723 + AluSx SINE Alu 1 298 -14 561 15 0 0 chr2 25236233 25236299 -225451555 + (GGAA)n Simple_repeat Simple_repeat 1 66 0 22 0 0 0 chr2 25236897 25236919 -225450935 + AT_rich Low_complexity Low_complexity 1 22 0 650 215 12 1 chr2 25237313 25237461 -225450393 + MLT1I LTR MaLR 18 166 -243 209 206 0 63 chr2 25237696 25237759 -225450095 + CT-rich Low_complexity Low_complexity 2 60 0 2424 85 0 0 chr2 25237868 25238162 -225449692 + AluSg SINE Alu 1 294 -16 287 213 111 46 chr2 25239208 25239316 -225448538 - MIR3 SINE MIR -23 185 71 662 215 79 17 chr2 25239417 25239594 -225448260 + MER5A DNA MER1_type 2 189 0 1968 125 63 33 chr2 25239982 25240797 -225447057 + SVA Other Other 458 868 -518 5907 107 35 36 chr2 25240829 25241785 -225446069 + SVA Other Other 432 1386 0 288 70 0 0 chr2 25241805 25241848 -225446006 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 189 0 0 0 chr2 25242433 25242454 -225445400 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 1521 160 4 15 chr2 25242454 25242716 -225445138 - AluJb SINE Alu -48 264 6 2173 112 31 0 chr2 25243192 25243486 -225444368 - AluSx SINE Alu -9 303 1 251 196 20 0 chr2 25244043 25244094 -225443760 + U5 snRNA snRNA 1 52 -64 260 211 110 55 chr2 25244342 25244451 -225443403 - MIR3 SINE MIR -23 185 71 658 220 79 17 chr2 25244552 25244729 -225443125 + MER5A DNA MER1_type 2 189 0 234 0 0 0 chr2 25244847 25244873 -225442981 + (T)n Simple_repeat Simple_repeat 1 26 0 564 42 0 0 chr2 25245048 25245119 -225442735 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 1463 137 133 4 chr2 25245119 25245367 -225442487 - AluJb SINE Alu -32 280 1 2205 113 27 0 chr2 25246984 25247284 -225440570 - AluSx SINE Alu -4 308 1 1163 136 35 0 chr2 25247468 25247637 -225440217 - AluSx SINE Alu -137 175 1 192 40 0 0 chr2 25247966 25247991 -225439863 + (CCA)n Simple_repeat Simple_repeat 1 25 0 524 133 22 33 chr2 25248615 25248705 -225439149 + FRAM SINE Alu 20 108 -68 1284 144 20 0 chr2 25248829 25249024 -225438830 + MLT2B3 LTR ERVL 1 199 -355 425 303 15 0 chr2 25249028 25249160 -225438694 - L1ME3A LINE L1 -328 5842 5709 1071 215 26 32 chr2 25249163 25249476 -225438378 + MLT2B2 LTR ERVL 258 515 0 1847 134 0 17 chr2 25249569 25249859 -225437995 + AluSx SINE Alu 1 285 -27 396 0 0 0 chr2 25249859 25249903 -225437951 + (CA)n Simple_repeat Simple_repeat 2 45 0 310 314 115 19 chr2 25250353 25250509 -225437345 + MIR SINE MIR 26 196 -66 206 157 0 20 chr2 25250852 25250903 -225436951 + (TCTCTG)n Simple_repeat Simple_repeat 1 50 0 2330 93 3 3 chr2 25251110 25251411 -225436443 - AluSx SINE Alu -11 301 1 289 329 145 7 chr2 25251427 25251605 -225436249 + MIR SINE MIR 14 211 -51 1204 254 35 0 chr2 25251714 25252025 -225435829 + MER33 DNA MER1_type 1 322 -2 228 205 60 0 chr2 25252774 25252857 -225434997 + (TA)n Simple_repeat Simple_repeat 2 89 0 245 287 140 0 chr2 25253749 25253885 -225433969 - L1M4 LINE L1 -956 5190 5036 1089 56 0 0 chr2 25253885 25254010 -225433844 - AluSp/q SINE Alu -17 296 172 232 267 107 20 chr2 25254010 25254160 -225433694 - L1P LINE L1 -1102 5044 4882 342 0 0 0 chr2 25254886 25254924 -225432930 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr2 25256197 25256219 -225431635 + AT_rich Low_complexity Low_complexity 1 22 0 2602 199 83 21 chr2 25256760 25257081 -225430773 - L1ME1 LINE L1 -6 6160 5860 826 155 75 43 chr2 25257081 25257242 -225430612 - FRAM SINE Alu 0 166 1 2602 199 83 21 chr2 25257242 25257574 -225430280 - L1ME1 LINE L1 -306 5860 5467 3547 156 160 19 chr2 25257636 25257703 -225430151 - L1MB7 LINE L1 0 6184 6128 2071 141 3 3 chr2 25257703 25258000 -225429854 - AluSx SINE Alu -15 297 1 3547 156 160 19 chr2 25258000 25258684 -225429170 - L1MB7 LINE L1 -56 6128 5326 2159 127 3 0 chr2 25258738 25259037 -225428817 + AluSg SINE Alu 4 303 -7 458 247 167 41 chr2 25259367 25259634 -225428220 - L2 LINE L2 -176 3137 2802 1416 93 132 10 chr2 25259634 25259728 -225428126 + MER30 DNA MER1_type 1 82 -148 198 71 0 0 chr2 25259728 25259756 -225428098 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1416 93 132 10 chr2 25259756 25259866 -225427988 + MER30 DNA MER1_type 82 230 0 458 247 167 41 chr2 25259866 25259987 -225427867 - L2 LINE L2 -511 2802 2698 455 209 0 0 chr2 25259994 25260085 -225427769 + L1MC3 LINE L1 7005 7095 -690 274 233 14 14 chr2 25260088 25260161 -225427693 + MLT1F1 LTR MaLR 36 108 -459 2323 129 73 5 chr2 25260161 25260557 -225427297 + L1MC3 LINE L1 7172 7594 -191 906 145 25 60 chr2 25260557 25260662 -225427192 + L1MC2 LINE L1 6137 6233 -111 1863 123 7 11 chr2 25260662 25260939 -225426915 + AluJb SINE Alu 11 286 -26 906 145 25 60 chr2 25260939 25261033 -225426821 + L1MC2 LINE L1 6233 6329 -15 209 333 0 0 chr2 25261039 25261111 -225426743 - L2 LINE L2 -615 2699 2628 * 337 262 170 2 chr2 25261076 25261253 -225426601 + MIR SINE MIR 16 222 -40 263 229 100 43 chr2 25262121 25262261 -225425593 - L1MC5 LINE L1 -53 7908 7761 697 260 18 18 chr2 25263784 25263953 -225423901 + MER5B DNA MER1_type 1 169 -9 392 350 85 5 chr2 25264189 25264389 -225423465 + MIR SINE MIR 47 262 0 377 288 31 50 chr2 25265124 25265303 -225422551 - MER5A DNA MER1_type 0 189 2 2355 81 0 19 chr2 25265680 25265989 -225421865 + AluSx SINE Alu 1 303 -9 223 278 158 62 chr2 25267007 25267216 -225420638 + L2 LINE L2 2809 3037 -235 469 269 60 81 chr2 25267283 25267493 -225420361 + MIR SINE MIR 34 260 -2 1821 139 3 70 chr2 25267673 25267989 -225419865 - AluJo SINE Alu -17 295 1 934 265 84 31 chr2 25268031 25268641 -225419213 - L1MEd LINE L1 -4723 1406 763 659 307 105 43 chr2 25268654 25268933 -225418921 - L1MEd LINE L1 -5427 692 381 2348 91 0 16 chr2 25268933 25269242 -225418612 - AluSx SINE Alu -8 304 1 659 307 105 43 chr2 25269242 25269353 -225418501 - L1MEd LINE L1 -5738 381 278 405 279 34 131 chr2 25269477 25269714 -225418140 + L2 LINE L2 2994 3207 -65 2587 50 0 7 chr2 25269828 25270128 -225417726 + AluY SINE Alu 4 301 -10 4637 210 83 20 chr2 25270144 25271009 -225416845 - L1ME2 LINE L1 -67 6097 5288 1966 97 8 0 chr2 25271009 25271267 -225416587 - AluY SINE Alu -4 307 48 4637 210 83 20 chr2 25271267 25272061 -225415793 - L1ME2 LINE L1 -876 5288 4278 1802 138 0 11 chr2 25272061 25272336 -225415518 - AluJb SINE Alu -17 295 24 4637 210 83 20 chr2 25272336 25272670 -225415184 - L1ME2 LINE L1 -1886 4278 3967 22 35 0 0 chr2 25274287 25274316 -225413538 + AT_rich Low_complexity Low_complexity 1 29 0 2335 97 0 10 chr2 25275118 25275427 -225412427 + AluY SINE Alu 1 306 -5 22 0 0 0 chr2 25276837 25276859 -225410995 + AT_rich Low_complexity Low_complexity 1 22 0 390 262 99 73 chr2 25277376 25277788 -225410066 - L1MC5 LINE L1 -27 7934 7512 2267 98 19 3 chr2 25277813 25278120 -225409734 - AluSx SINE Alu 0 312 1 1061 245 30 30 chr2 25278137 25278255 -225409599 - L1MC4a LINE L1 -898 6910 6793 2407 98 0 0 chr2 25278255 25278562 -225409292 - AluSx SINE Alu -5 307 1 1061 245 30 30 chr2 25278562 25278745 -225409109 - L1MC4a LINE L1 -1014 6794 6609 3574 107 11 52 chr2 25278824 25279099 -225408755 + MER75 DNA T2_type 2 246 -268 2254 98 0 3 chr2 25279099 25279385 -225408469 - AluSc SINE Alu -24 285 1 3574 107 11 52 chr2 25279385 25279644 -225408210 + MER75 DNA T2_type 246 514 0 1420 154 0 26 chr2 25279732 25279888 -225407966 - AluJb SINE Alu -23 289 131 225 0 0 0 chr2 25279888 25279913 -225407941 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 78 0 3 chr2 25279913 25280197 -225407657 - AluY SINE Alu -28 283 1 1420 154 0 26 chr2 25280197 25280272 -225407582 - AluJb SINE Alu -179 133 63 541 233 204 61 chr2 25280278 25280671 -225407183 - L1MDa LINE L1 -4785 1755 1320 2587 310 68 24 chr2 25280671 25280739 -225407115 - L2 LINE L2 -513 2801 2737 2296 117 0 0 chr2 25280739 25281046 -225406808 - AluSx SINE Alu -5 307 1 2587 310 68 24 chr2 25281046 25281078 -225406776 - L2 LINE L2 -577 2737 2708 907 110 0 16 chr2 25281078 25281205 -225406649 + FLAM_C SINE Alu 1 125 -8 2587 310 68 24 chr2 25281205 25282147 -225405707 - L2 LINE L2 -606 2708 1712 2219 107 0 19 chr2 25282148 25282456 -225405398 - AluSx SINE Alu -10 302 1 213 143 71 0 chr2 25282674 25282716 -225405138 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 209 249 121 91 chr2 25282898 25283063 -225404791 - L2 LINE L2 -23 3290 3121 289 291 27 27 chr2 25283345 25283455 -225404399 - MER5A DNA MER1_type -72 117 8 325 184 154 110 chr2 25283741 25283877 -225403977 + MIR SINE MIR 91 232 -30 2702 17 0 0 chr2 25283961 25284255 -225403599 - AluYa5 SINE Alu -17 294 1 1103 271 91 33 chr2 25284284 25284737 -225403117 + L2 LINE L2 2220 2698 -616 876 154 0 7 chr2 25284742 25284885 -225402969 + L1MB8 LINE L1 6037 6178 0 2449 174 191 104 chr2 25284904 25285150 -225402704 + L1MC3 LINE L1 6137 6360 -657 2000 116 3 29 chr2 25285150 25285461 -225402393 - AluSx SINE Alu -9 303 1 2449 174 191 104 chr2 25285461 25285805 -225402049 + L1MC3 LINE L1 6360 6672 -345 264 284 39 59 chr2 25285805 25285907 -225401947 + MLT1F1 LTR MaLR 35 134 -433 2449 174 191 104 chr2 25285907 25286346 -225401508 + L1MC3 LINE L1 6672 6925 -92 2491 73 0 6 chr2 25286346 25286659 -225401195 + AluY SINE Alu 1 311 0 2449 174 191 104 chr2 25286659 25286761 -225401093 + L1MC3 LINE L1 6925 7017 0 1336 302 70 16 chr2 25286777 25287261 -225400593 + L2 LINE L2 2804 3313 0 2169 111 10 10 chr2 25287306 25287612 -225400242 + AluSx SINE Alu 1 306 -6 224 286 0 29 chr2 25287648 25287718 -225400136 - MIR SINE MIR -124 84 17 1924 123 0 0 chr2 25288427 25288687 -225399167 - AluSx SINE Alu -52 260 1 499 296 64 20 chr2 25288698 25288948 -225398906 - L1MEd LINE L1 -4943 1176 916 403 337 111 23 chr2 25289509 25289770 -225398084 - L1MEd LINE L1 -4946 1173 890 24 32 0 0 chr2 25290538 25290569 -225397285 + AT_rich Low_complexity Low_complexity 1 31 0 2556 7 0 0 chr2 25290582 25290856 -225396998 - AluYb8 SINE Alu -5 313 40 748 130 0 0 chr2 25290863 25290963 -225396891 - FLAM_A SINE Alu -18 124 25 180 353 130 55 chr2 25291426 25291772 -225396082 - L2 LINE L2 -92 3180 2809 544 187 97 58 chr2 25291829 25291889 -225395965 - MER3 DNA MER1_type -17 192 136 2092 133 0 7 chr2 25291889 25292190 -225395664 + AluSq SINE Alu 1 299 -14 544 187 97 58 chr2 25292190 25292284 -225395570 - MER3 DNA MER1_type -73 136 32 254 308 42 50 chr2 25292309 25292429 -225395425 - L2 LINE L2 -560 2754 2636 255 265 15 0 chr2 25293140 25293208 -225394646 + L2 LINE L2 2323 2391 -923 16494 119 21 14 chr2 25293936 25295358 -225392496 + Tigger1 DNA MER2_type 1 1450 -968 2173 107 20 3 chr2 25295358 25295656 -225392198 - AluSq SINE Alu -10 303 1 16494 119 21 14 chr2 25295656 25296633 -225391221 + Tigger1 DNA MER2_type 1450 2418 0 643 237 28 47 chr2 25297160 25297371 -225390483 - HAL1 LINE L1 -2256 251 45 961 122 7 0 chr2 25297812 25297951 -225389903 - FAM SINE Alu -5 44 1 461 231 113 19 chr2 25300328 25300409 -225387445 - MIR SINE MIR -67 195 123 2002 128 3 32 chr2 25300409 25300721 -225387133 + AluSx SINE Alu 1 303 -9 461 231 113 19 chr2 25300721 25300799 -225387055 - MIR SINE MIR -139 123 21 323 276 84 34 chr2 25301019 25301182 -225386672 - MER5A DNA MER1_type -8 181 1 1340 109 63 225 chr2 25303126 25303540 -225384314 + MER7A DNA MER2_type 1 345 -1 32 0 0 0 chr2 25304452 25304484 -225383370 + AT_rich Low_complexity Low_complexity 1 32 0 828 154 8 0 chr2 25304484 25304601 -225383253 - FLAM_C SINE Alu -15 118 1 1199 119 4 132 chr2 25305074 25305135 -225382719 + AluJo SINE Alu 88 155 -157 2265 99 0 0 chr2 25305135 25305455 -225382399 + AluSg SINE Alu 1 320 0 1199 119 4 132 chr2 25305455 25305469 -225382385 + AluJo SINE Alu 155 169 -143 1784 164 3 10 chr2 25305469 25305773 -225382081 + AluJo SINE Alu 1 302 -10 1199 119 4 132 chr2 25305773 25305938 -225381916 + AluJo SINE Alu 169 299 -13 1144 217 68 32 chr2 25306533 25306842 -225381012 - MER2 DNA MER2_type -25 320 1 253 241 111 46 chr2 25307285 25307393 -225380461 - MER5A DNA MER1_type -6 183 69 293 306 51 88 chr2 25307434 25307888 -225379966 - L2 LINE L2 -653 2661 2225 2114 114 7 7 chr2 25307941 25308238 -225379616 - AluSx SINE Alu -15 297 1 274 194 113 0 chr2 25308584 25308646 -225379208 - L2 LINE L2 -1 3312 3244 723 221 0 8 chr2 25308824 25308955 -225378899 + FLAM_A SINE Alu 1 130 -3 337 242 39 39 chr2 25309149 25309277 -225378577 + L1 LINE L1 5265 5392 -754 1883 167 0 0 chr2 25309281 25309563 -225378291 + AluJo SINE Alu 1 282 -30 960 267 12 18 chr2 25309687 25310020 -225377834 + L1ME4a LINE L1 5538 5868 -253 234 330 55 0 chr2 25310048 25310139 -225377715 - MIR SINE MIR -1 261 166 363 23 0 0 chr2 25310425 25310469 -225377385 + (CA)n Simple_repeat Simple_repeat 1 44 0 198 208 0 0 chr2 25310469 25310517 -225377337 + GA-rich Low_complexity Low_complexity 3 50 0 314 308 164 0 chr2 25310667 25310771 -225377083 + L2 LINE L2 3141 3261 -11 826 220 62 50 chr2 25311074 25311333 -225376521 - MIR SINE MIR 0 262 1 1565 165 61 11 chr2 25311881 25312160 -225375694 + AluJb SINE Alu 1 293 -19 216 310 90 10 chr2 25313014 25313114 -225374740 - L2 LINE L2 -12 3260 3153 200 340 174 0 chr2 25313403 25313547 -225374307 - MIR SINE MIR -10 252 84 1945 154 3 3 chr2 25314368 25314667 -225373187 - AluJb SINE Alu -13 299 1 2276 110 3 0 chr2 25315863 25316162 -225371692 + AluSx SINE Alu 1 300 -12 570 203 23 30 chr2 25317995 25318128 -225369726 - AluSg1 SINE Alu -176 133 2 1089 148 0 23 chr2 25319136 25319312 -225368542 - AluJo/FRAM SINE Alu -7 305 134 1836 142 35 10 chr2 25319312 25319600 -225368254 - AluSx SINE Alu -16 296 2 278 218 79 74 chr2 25319645 25319832 -225368022 + L1MDa LINE L1 1543 1726 -4814 1728 182 7 3 chr2 25319832 25320161 -225367693 + AluJb SINE Alu 1 312 0 278 218 79 74 chr2 25320161 25320197 -225367657 + L1MDa LINE L1 1726 1760 -4780 884 159 34 193 chr2 25320333 25320379 -225367475 + L1M4 LINE L1 4136 4188 -1958 1856 142 3 60 chr2 25320379 25320530 -225367324 + AluJb SINE Alu 1 124 -188 2176 109 13 10 chr2 25320530 25320833 -225367021 + AluY SINE Alu 1 304 -7 1856 142 3 60 chr2 25320833 25321012 -225366842 + AluJb SINE Alu 124 312 0 884 159 34 193 chr2 25321012 25321136 -225366718 + L1M4 LINE L1 4188 4330 -1816 1731 170 7 17 chr2 25321136 25321430 -225366424 + AluJo SINE Alu 1 291 -21 884 159 34 193 chr2 25321430 25321561 -225366293 + L1M4 LINE L1 4330 4377 -1769 2444 69 0 10 chr2 25321561 25321865 -225365989 + AluY SINE Alu 1 301 -10 884 159 34 193 chr2 25321865 25321913 -225365941 + L1M4 LINE L1 4377 4431 -1715 1966 136 0 0 chr2 25321914 25322187 -225365667 + AluSx SINE Alu 1 273 -39 229 182 0 0 chr2 25322187 25322231 -225365623 + GA-rich Low_complexity Low_complexity 1 44 0 966 138 6 11 chr2 25322231 25322412 -225365442 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 572 138 13 38 chr2 25322418 25322577 -225365277 + GA-rich Low_complexity Low_complexity 2 156 0 1065 208 80 13 chr2 25322582 25322895 -225364959 + L1M4 LINE L1 4416 4749 -1397 2568 118 66 9 chr2 25323857 25324282 -225363572 + L1MA4A LINE L1 5762 6210 -93 1921 105 19 0 chr2 25324291 25324548 -225363306 - L1PA12 LINE L1 0 6168 5907 658 106 0 0 chr2 25324548 25324642 -225363212 + L1MA4A LINE L1 6204 6297 -6 264 236 42 0 chr2 25325028 25325100 -225362754 + L2 LINE L2 2196 2270 -1044 1350 270 163 22 chr2 25325247 25326199 -225361655 + L2 LINE L2 2229 3311 -2 525 184 48 24 chr2 25326239 25326364 -225361490 + MER97a DNA MER1_type? 767 894 0 320 197 0 0 chr2 25326364 25326425 -225361429 - L1M4 LINE L1 -1609 4537 4477 2304 103 3 0 chr2 25326463 25326765 -225361089 - AluSp SINE Alu -10 303 1 2186 219 30 16 chr2 25326769 25327330 -225360524 - L1M4 LINE L1 -1661 4485 3917 509 302 80 24 chr2 25327334 25327672 -225360182 - L1MEc LINE L1 -4653 1743 1387 2287 120 0 3 chr2 25327675 25327983 -225359871 - AluSx SINE Alu -5 307 1 545 297 114 67 chr2 25328121 25328436 -225359418 - L1MEc LINE L1 -5138 1067 719 2398 95 0 3 chr2 25328436 25328741 -225359113 - AluSx SINE Alu -8 304 1 545 297 114 67 chr2 25328741 25328916 -225358938 - L1MEc LINE L1 -5486 719 554 2245 98 3 0 chr2 25329274 25329561 -225358293 - AluSq SINE Alu -21 292 5 239 406 30 0 chr2 25330807 25330940 -225356914 - L2 LINE L2 -461 2853 2717 2039 122 6 34 chr2 25331374 25331695 -225356159 + AluSx SINE Alu 1 312 0 234 311 111 0 chr2 25331818 25331908 -225355946 - L2 LINE L2 -2 3311 3212 1093 321 45 3 chr2 25331934 25332413 -225355441 - L2 LINE L2 -77 3236 2740 2022 106 20 17 chr2 25332616 25332917 -225354937 - AluSx SINE Alu -10 302 1 1460 190 97 15 chr2 25333163 25333505 -225354349 + L1MD3 LINE L1 4568 4937 -1209 2059 85 44 4 chr2 25333507 25333811 -225354043 - AluSq SINE Alu 0 315 1 1249 215 13 16 chr2 25333821 25334181 -225353673 + L1MD3 LINE L1 5267 7993 -2 1158 157 0 30 chr2 25334181 25334378 -225353476 - AluJb SINE Alu -12 300 110 2283 106 0 3 chr2 25334503 25334805 -225353049 + AluSq SINE Alu 1 301 -12 2244 210 61 9 chr2 25334805 25335349 -225352505 + L1ME1 LINE L1 5595 6166 0 * 3457 141 63 91 chr2 25335340 25336121 -225351733 + L1MB2 LINE L1 5413 6171 0 294 148 0 0 chr2 25336472 25336526 -225351328 + (CA)n Simple_repeat Simple_repeat 2 55 0 1721 173 3 7 chr2 25336977 25337260 -225350594 + AluJo SINE Alu 1 282 -30 192 97 0 0 chr2 25337263 25337294 -225350560 + (T)n Simple_repeat Simple_repeat 1 31 0 1391 137 48 9 chr2 25337410 25337637 -225350217 - MER46A DNA MER2_type 0 236 1 1917 108 37 0 chr2 25337997 25338286 -225349568 + AluSg SINE Alu 1 299 0 1304 201 112 29 chr2 25339128 25339282 -225348572 - MER58B DNA MER1_type -2079 341 201 1624 154 50 40 chr2 25339282 25339581 -225348273 - AluSx SINE Alu -10 302 1 1304 201 112 29 chr2 25339581 25339740 -225348114 - MER58B DNA MER1_type -2219 201 2 428 276 78 0 chr2 25340329 25340445 -225347409 - L2 LINE L2 0 3313 3189 186 236 90 22 chr2 25340506 25340595 -225347259 - MIR SINE MIR -50 212 118 2332 110 0 0 chr2 25340597 25340896 -225346958 - AluSx SINE Alu -13 299 1 222 206 191 0 chr2 25341151 25341214 -225346640 + L2 LINE L2 3198 3272 0 2123 132 0 3 chr2 25341253 25341557 -225346297 + AluSx SINE Alu 1 303 -9 232 287 54 100 chr2 25341674 25341793 -225346061 - MER5B DNA MER1_type 0 189 63 2447 82 3 0 chr2 25341793 25342096 -225345758 - AluSp SINE Alu -9 304 1 232 287 54 100 chr2 25342096 25342152 -225345702 - MER5B DNA MER1_type -126 63 6 240 224 20 0 chr2 25342191 25342240 -225345614 - L3 LINE CR1 -8 1569 1520 340 301 32 38 chr2 25342625 25342805 -225345049 + MLT1J2 LTR MaLR 263 401 -8 339 226 104 0 chr2 25342866 25342972 -225344882 + L1ME LINE L1 5688 5804 -366 2198 99 31 0 chr2 25343256 25343550 -225344304 + AluSq SINE Alu 1 303 -10 428 296 48 77 chr2 25343740 25344092 -225343762 + HAL1 LINE L1 294 635 -1872 375 41 0 0 chr2 25344241 25344290 -225343564 + (TA)n Simple_repeat Simple_repeat 1 49 0 2205 120 0 7 chr2 25344290 25344589 -225343265 - AluSq SINE Alu -16 297 1 2768 259 66 83 chr2 25344801 25345137 -225342717 + L1M4 LINE L1 2742 3082 -3064 2241 100 7 3 chr2 25345137 25345436 -225342418 + AluSc SINE Alu 3 302 -7 2768 259 66 83 chr2 25345436 25346589 -225341265 + L1M4 LINE L1 3082 4370 -1776 311 216 14 0 chr2 25346589 25346663 -225341191 + L1MB7 LINE L1 6099 6173 -11 2768 259 66 83 chr2 25346663 25347415 -225340439 + L1M4 LINE L1 4370 5134 -1012 295 287 96 22 chr2 25347746 25347882 -225339972 + HAL1b LINE L1 746 891 -457 28 0 0 0 chr2 25347905 25347933 -225339921 + AT_rich Low_complexity Low_complexity 1 28 0 1963 135 3 7 chr2 25348050 25348339 -225339515 + AluJb SINE Alu 1 288 -24 333 279 184 5 chr2 25348350 25348540 -225339314 + HAL1 LINE L1 2283 2506 -1 2122 138 7 0 chr2 25349860 25350165 -225337689 + AluSp SINE Alu 1 307 -6 1753 164 3 13 chr2 25350937 25351241 -225336613 + AluJb SINE Alu 1 301 -11 208 239 45 45 chr2 25351408 25351475 -225336379 + L2 LINE L2 2714 2780 -534 5808 107 35 36 chr2 25351993 25352949 -225334905 - SVA Other Other 0 1386 432 4831 111 45 29 chr2 25352981 25354762 -225333092 - SVA Other Other -518 868 1 2069 87 0 0 chr2 25354776 25355040 -225332814 - AluSc SINE Alu -45 264 1 1719 150 3 72 chr2 25356100 25356407 -225331447 + AluJo SINE Alu 1 286 -26 2166 110 3 0 chr2 25356455 25356745 -225331109 - AluSq SINE Alu -18 295 5 233 227 72 0 chr2 25357001 25357078 -225330776 - L1ME LINE L1 -263 5903 5825 261 0 8 0 chr2 25357097 25357165 -225330689 + (T)n Simple_repeat Simple_repeat 1 29 0 1422 252 103 32 chr2 25357204 25358487 -225329367 - L1ME LINE L1 -371 5799 4405 267 164 0 18 chr2 25358519 25358574 -225329280 - L1MB2 LINE L1 0 6171 6118 180 0 0 0 chr2 25358574 25358594 -225329260 + (TTA)n Simple_repeat Simple_repeat 2 21 0 298 118 59 0 chr2 25358594 25358645 -225329209 - AluJ/FRAM SINE Alu -17 285 232 4523 27 8 0 chr2 25358663 25359152 -225328702 + SVA Other Other 891 1383 -3 2241 103 6 10 chr2 25359297 25359609 -225328245 + AluSx SINE Alu 1 311 -1 438 201 86 72 chr2 25359624 25359763 -225328091 - L1MB2 LINE L1 -61 6110 5970 * 1457 184 4 0 chr2 25359757 25360001 -225327853 - L1MB2 LINE L1 -413 5758 5514 335 318 71 24 chr2 25360009 25360179 -225327675 - L1ME LINE L1 -2020 4126 3949 860 114 0 0 chr2 25360215 25360338 -225327516 - AluSg/x SINE Alu -12 298 176 815 280 78 33 chr2 25360351 25360893 -225326961 - L1ME LINE L1 -2204 3942 3377 299 276 28 7 chr2 25361227 25361372 -225326482 - L1ME LINE L1 -3762 2384 2237 2353 97 7 0 chr2 25361394 25361704 -225326150 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 25362952 25362976 -225324878 + AT_rich Low_complexity Low_complexity 1 24 0 325 312 69 6 chr2 25363063 25363250 -225324604 - L1MDa LINE L1 -762 2139 1852 * 505 243 61 42 chr2 25363230 25363444 -225324410 - L1MDa LINE L1 -5007 1523 1306 603 219 0 34 chr2 25363730 25363858 -225323996 + MER3 DNA MER1_type 1 125 -37 2107 108 35 0 chr2 25363858 25364146 -225323708 - AluSx SINE Alu -14 298 1 603 219 0 34 chr2 25364146 25364163 -225323691 + MER3 DNA MER1_type 125 141 -68 1948 179 66 34 chr2 25364166 25364606 -225323248 + MER101 LTR ERV1 11 464 -10 318 345 74 5 chr2 25364621 25364824 -225323030 - L1MDa LINE L1 -5664 866 650 1649 204 0 10 chr2 25365065 25365373 -225322481 - AluJo SINE Alu -7 305 1 696 268 111 90 chr2 25365393 25365539 -225322315 - L1 LINE L1 -2307 3839 3697 1923 114 7 4 chr2 25365539 25365812 -225322042 - AluSq SINE Alu -2 311 38 696 268 111 90 chr2 25365812 25366695 -225321159 - L1 LINE L1 -2449 3697 2789 1188 261 52 17 chr2 25366704 25367098 -225320756 - L2 LINE L2 -294 3019 2611 28 48 0 0 chr2 25367276 25367318 -225320536 + AT_rich Low_complexity Low_complexity 1 42 0 204 242 15 0 chr2 25367429 25367495 -225320359 + (TA)n Simple_repeat Simple_repeat 1 67 0 1820 129 0 0 chr2 25367938 25368186 -225319668 - AluJb SINE Alu -64 248 1 2288 71 7 19 chr2 25368437 25368745 -225319109 + AluSq SINE Alu 1 304 -9 713 291 80 6 chr2 25369437 25369803 -225318051 + L1ME3A LINE L1 5524 5940 -230 2373 83 17 0 chr2 25369997 25370298 -225317556 + AluY SINE Alu 1 306 -5 257 214 36 0 chr2 25370595 25370651 -225317203 - L1ME4a LINE L1 -195 5926 5869 2167 131 0 13 chr2 25370716 25371030 -225316824 + AluSx SINE Alu 1 310 -2 364 309 81 94 chr2 25371041 25371413 -225316441 - L1MC4a LINE L1 -1976 5832 5466 2246 93 3 17 chr2 25372256 25372556 -225315298 - AluSc SINE Alu -9 300 5 280 304 5 22 chr2 25372726 25372817 -225315037 + MIR SINE MIR 59 149 -73 689 236 18 12 chr2 25372820 25372985 -225314869 + Charlie1 DNA MER1_type 2 167 -2594 2229 156 44 11 chr2 25372988 25373298 -225314556 + Charlie1 DNA MER1_type 2312 2641 -120 2151 114 10 0 chr2 25373298 25373595 -225314259 - AluSx SINE Alu -12 300 1 2229 156 44 11 chr2 25373595 25373719 -225314135 + Charlie1 DNA MER1_type 2641 2760 -1 2372 93 3 13 chr2 25374967 25375278 -225312576 + AluSx SINE Alu 1 308 -4 191 237 155 31 chr2 25375280 25375377 -225312477 - L2 LINE L2 0 3313 3205 864 204 19 0 chr2 25375602 25375764 -225312090 + L1MC/D LINE L1 5398 5562 -2246 2611 208 52 81 chr2 25376584 25377108 -225310746 - HsTC2c DNA MER2_type -1169 729 232 2300 92 3 0 chr2 25377108 25377401 -225310453 - AluSc SINE Alu -15 294 1 2611 208 52 81 chr2 25377401 25377625 -225310229 - HsTC2c DNA MER2_type -1666 232 3 180 322 23 46 chr2 25377654 25377741 -225310113 + L3b LINE CR1 1410 1494 -89 208 252 59 74 chr2 25378459 25378594 -225309260 - MER5B DNA MER1_type -45 133 1 1302 261 195 46 chr2 25379853 25380484 -225307370 + L2 LINE L2 1 725 -2589 732 214 112 96 chr2 25380484 25380807 -225307047 + MLT1D LTR MaLR 2 329 -176 2150 109 20 13 chr2 25380836 25381140 -225306714 + AluSx SINE Alu 1 306 -6 1665 244 54 46 chr2 25381140 25381644 -225306210 + MLT2B1 LTR ERVL 13 520 0 342 314 114 7 chr2 25381644 25381784 -225306070 + MLT1D LTR MaLR 313 467 0 1024 272 107 33 chr2 25381803 25382289 -225305565 + L2 LINE L2 733 1254 -2060 328 258 0 0 chr2 25382278 25382344 -225305510 + L2 LINE L2 3005 3070 -243 * 2582 148 29 5 chr2 25382366 25382777 -225305077 + MSTB LTR MaLR 1 421 -5 4420 163 28 37 chr2 25382778 25383635 -225304219 - L1MB7 LINE L1 -19 6165 5317 1995 145 10 0 chr2 25383647 25383943 -225303911 - AluSx SINE Alu -13 299 1 945 128 122 17 chr2 25383960 25384140 -225303714 - L1MB2 LINE L1 -12 6159 5961 6325 199 42 41 chr2 25384142 25384755 -225303099 - L1MB7 LINE L1 -814 5332 4721 2128 73 0 38 chr2 25384755 25385042 -225302812 - AluY SINE Alu -3 308 33 6325 199 42 41 chr2 25385042 25385248 -225302606 - L1MB7 LINE L1 -1425 4721 4517 2149 128 0 22 chr2 25385248 25385561 -225302293 - AluSx SINE Alu -6 306 1 6325 199 42 41 chr2 25385561 25385740 -225302114 - L1MB7 LINE L1 -1629 4517 4340 595 90 13 0 chr2 25385740 25385818 -225302036 - MADE1 DNA Mariner -1 79 1 6325 199 42 41 chr2 25385818 25386113 -225301741 - L1MB7 LINE L1 -1806 4340 4047 1565 149 17 61 chr2 25386113 25386409 -225301445 - AluJb SINE Alu -18 294 12 6325 199 42 41 chr2 25386409 25386699 -225301155 - L1MB7 LINE L1 -2099 4047 3744 1078 230 201 94 chr2 25386790 25387377 -225300477 + MLT1E3 LTR MaLR 5 624 0 601 238 32 0 chr2 25387377 25387503 -225300351 - MER94 DNA DNA -4 130 1 386 350 38 0 chr2 25387587 25387747 -225300107 - L2 LINE L2 -2881 433 268 237 171 118 53 chr2 25387889 25387965 -225299889 - MER4D LTR ERV1 -68 835 755 2368 94 3 0 chr2 25388754 25389062 -225298792 + AluSc SINE Alu 1 309 0 1115 92 0 13 chr2 25389069 25389222 -225298632 + L1MB3 LINE L1 6028 6178 -5 814 255 109 39 chr2 25389610 25390183 -225297671 + MLT1G LTR MaLR 22 590 0 2361 82 7 0 chr2 25390691 25390995 -225296859 + AluSq SINE Alu 1 306 -7 1609 171 40 20 chr2 25391006 25391310 -225296544 + AluJb SINE Alu 1 310 -2 1898 206 122 36 chr2 25391344 25391877 -225295977 + L2 LINE L2 1775 2353 -961 2502 60 0 0 chr2 25392251 25392549 -225295305 + AluY SINE Alu 1 298 -13 370 231 8 142 chr2 25392967 25393012 -225294842 + MER5B DNA MER1_type 1 50 -128 2259 74 7 23 chr2 25393012 25393311 -225294543 - AluSq SINE Alu -19 294 1 370 231 8 142 chr2 25393311 25393399 -225294455 + MER5B DNA MER1_type 50 116 -62 532 281 152 33 chr2 25393904 25394267 -225293587 - MLT1J2 LTR MaLR -44 406 1 536 232 8 8 chr2 25394269 25394394 -225293460 + L2 LINE L2 3189 3313 0 274 186 0 17 chr2 25394989 25395048 -225292806 + L1ME3A LINE L1 6113 6170 0 2596 58 0 10 chr2 25396282 25396593 -225291261 - AluY SINE Alu -3 308 1 30 0 0 0 chr2 25396907 25396937 -225290917 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr2 25396937 25396959 -225290895 + (C)n Simple_repeat Simple_repeat 1 22 0 1848 165 0 7 chr2 25397319 25397628 -225290226 + AluSx SINE Alu 1 307 0 2408 84 10 0 chr2 25397887 25398195 -225289659 + AluSp SINE Alu 1 311 -2 1234 141 0 0 chr2 25400245 25400422 -225287432 + AluSg/x SINE Alu 120 296 -16 326 188 71 35 chr2 25401115 25401200 -225286654 + L2 LINE L2 3169 3256 -16 1983 130 42 0 chr2 25402865 25403150 -225284704 + AluSg SINE Alu 1 297 -13 2378 76 30 0 chr2 25403497 25403800 -225284054 - AluSx SINE Alu 0 312 1 8489 155 89 48 chr2 25403883 25405568 -225282286 - MER52A LTR ERV1 0 1755 1 523 231 40 40 chr2 25405840 25405907 -225281947 - L1MC5 LINE L1 -35 7926 7860 2374 101 0 0 chr2 25405907 25406214 -225281640 + AluSx SINE Alu 1 307 -5 523 231 40 40 chr2 25406214 25406319 -225281535 - L1MC5 LINE L1 -100 7861 7754 327 270 262 28 chr2 25406348 25406600 -225281254 - L1ME LINE L1 -401 5763 5453 21 82 0 0 chr2 25406703 25406752 -225281102 + AT_rich Low_complexity Low_complexity 1 49 0 2808 191 50 10 chr2 25408798 25409518 -225278336 - L1MC4 LINE L1 0 8042 7222 1440 139 0 43 chr2 25411260 25411490 -225276364 + AluJb SINE Alu 85 304 -8 260 283 25 82 chr2 25411853 25412012 -225275842 - L2 LINE L2 -4 3309 3160 933 246 49 92 chr2 25412117 25412608 -225275246 + MLT1J LTR MaLR 34 503 -8 199 343 71 10 chr2 25412627 25412726 -225275128 - MIR SINE MIR -144 118 14 187 405 41 23 chr2 25413171 25413391 -225274463 - L2 LINE L2 -660 2654 2431 2357 82 7 0 chr2 25413476 25413768 -225274086 - AluY SINE Alu -17 294 1 1907 151 0 10 chr2 25413942 25414240 -225273614 + AluJo SINE Alu 1 295 -17 285 286 100 56 chr2 25414487 25414718 -225273136 + MLT1L LTR MaLR 241 583 -30 35 24 0 0 chr2 25415307 25415349 -225272505 + AT_rich Low_complexity Low_complexity 1 42 0 2280 119 0 0 chr2 25415968 25416278 -225271576 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr2 25416835 25416863 -225270991 + AT_rich Low_complexity Low_complexity 1 28 0 531 244 132 12 chr2 25416975 25417225 -225270629 - L1ME4a LINE L1 -290 5831 5552 216 97 0 0 chr2 25418302 25418333 -225269521 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1628 189 6 43 chr2 25418525 25418714 -225269140 - AluJo SINE Alu -1 311 137 2136 114 30 0 chr2 25418714 25419013 -225268841 - AluSx SINE Alu -4 308 1 1628 189 6 43 chr2 25419013 25419146 -225268708 - AluJo SINE Alu -175 137 1 22 35 0 0 chr2 25419959 25419988 -225267866 + AT_rich Low_complexity Low_complexity 1 29 0 271 168 99 59 chr2 25420245 25420346 -225267508 + L1MC5 LINE L1 7275 7379 -582 387 268 39 16 chr2 25420595 25420722 -225267132 + MIR SINE MIR 118 247 -15 745 296 101 56 chr2 25422928 25423354 -225264500 + LTR67 LTR ERVL 113 557 0 2248 98 14 0 chr2 25423444 25423739 -225264115 + AluSp SINE Alu 1 299 -14 459 0 0 0 chr2 25423785 25423836 -225264018 + (CA)n Simple_repeat Simple_repeat 2 52 0 572 246 32 8 chr2 25423841 25423967 -225263887 - MER5B DNA MER1_type -49 129 1 346 244 78 34 chr2 25423988 25424145 -225263709 + L1MC4a LINE L1 5288 5444 -730 1135 159 0 0 chr2 25424227 25424403 -225263451 - AluJb SINE Alu -1 311 136 1164 196 51 106 chr2 25424618 25424843 -225263011 - L1ME3A LINE L1 0 6170 5981 2228 119 0 0 chr2 25424843 25425137 -225262717 - AluSx SINE Alu -18 294 1 1164 196 51 106 chr2 25425137 25425364 -225262490 - L1ME3A LINE L1 -189 5981 5743 446 175 11 7 chr2 25425553 25425646 -225262208 + MER2 DNA MER2_type 1 89 -150 727 192 8 0 chr2 25425826 25425951 -225261903 + FLAM_A SINE Alu 2 127 -6 387 145 36 24 chr2 25426229 25426312 -225261542 + L1MC4a LINE L1 5680 5763 -2045 341 302 114 41 chr2 25426319 25426564 -225261290 + L1MC4a LINE L1 5813 6075 -1733 1561 244 55 24 chr2 25426591 25427210 -225260644 + L1M4 LINE L1 3015 3652 -2494 186 43 0 0 chr2 25427238 25427261 -225260593 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 751 179 0 0 chr2 25427261 25427378 -225260476 - AluJb SINE Alu -193 119 3 2067 96 3 3 chr2 25427380 25427671 -225260183 - L1PA16 LINE L1 -12 6154 5864 2005 257 86 19 chr2 25427671 25427809 -225260045 + L1M4 LINE L1 3639 3766 -2380 2236 117 0 0 chr2 25427809 25428117 -225259737 + AluSg SINE Alu 1 308 -2 2005 257 86 19 chr2 25428117 25428874 -225258980 + L1M4 LINE L1 3766 4594 -1552 180 0 0 0 chr2 25428896 25428916 -225258938 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3462 194 70 15 chr2 25428916 25429698 -225258156 - MER21B LTR ERV1 -19 844 20 390 179 26 13 chr2 25429800 25429878 -225257976 - MER21B LTR ERV1 -773 90 12 189 319 0 0 chr2 25430046 25430093 -225257761 - MER5B DNA MER1_type -129 49 3 2618 55 0 0 chr2 25430782 25431093 -225256761 + AluY SINE Alu 1 311 0 1713 156 52 10 chr2 25431742 25432030 -225255824 + AluSx SINE Alu 1 300 -12 2486 80 0 0 chr2 25433891 25434193 -225253661 + AluSg SINE Alu 1 302 -8 757 167 15 0 chr2 25434817 25434949 -225252905 + AluJo SINE Alu 1 134 -178 1051 149 0 18 chr2 25435005 25435173 -225252681 + AluJo SINE Alu 131 295 -17 203 59 0 29 chr2 25435476 25435510 -225252344 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2178 81 23 55 chr2 25435578 25435888 -225251966 - AluSp SINE Alu -13 300 1 1782 131 15 15 chr2 25436329 25436596 -225251258 + AluSx SINE Alu 1 267 -45 305 172 0 92 chr2 25436600 25436687 -225251167 - MER115 DNA AcHobo -106 587 509 539 291 34 0 chr2 25436721 25436869 -225250985 - MER115 DNA AcHobo -253 440 288 309 345 108 14 chr2 25436974 25437270 -225250584 + L1M4 LINE L1 1263 1586 -4956 354 297 34 0 chr2 25437699 25437817 -225250037 + L1MEd LINE L1 636 757 -5448 2616 124 120 22 chr2 25437984 25438476 -225249378 + MER4B LTR ERV1 1 540 -70 216 0 0 0 chr2 25439683 25439707 -225248147 + (T)n Simple_repeat Simple_repeat 1 24 0 1847 181 37 3 chr2 25439907 25440256 -225247598 + MLT1A1 LTR MaLR 1 361 -4 676 183 17 0 chr2 25440614 25440734 -225247120 + FLAM_A SINE Alu 1 122 -11 2314 92 3 7 chr2 25441262 25441565 -225246289 + AluSp SINE Alu 1 302 -11 2316 102 0 0 chr2 25441862 25442167 -225245687 - AluY SINE Alu -6 305 1 259 258 71 32 chr2 25443266 25443421 -225244433 + L1MEd LINE L1 1514 1674 -4722 363 329 95 33 chr2 25443483 25443757 -225244097 + L1MEd LINE L1 2166 2456 -3940 796 212 10 5 chr2 25443783 25443986 -225243868 + L1MB7 LINE L1 3882 4085 -2061 * 4126 160 34 34 chr2 25443982 25444688 -225243166 + L1MB7 LINE L1 5100 5809 -375 2409 80 3 19 chr2 25444688 25444999 -225242855 + AluSp SINE Alu 1 306 -7 4126 160 34 34 chr2 25444999 25445351 -225242503 + L1MB7 LINE L1 5809 6159 -25 713 265 17 80 chr2 25445383 25445438 -225242416 + L1MEd LINE L1 2454 2511 -3704 1358 206 78 27 chr2 25445438 25445734 -225242120 + AluJo SINE Alu 1 311 -1 713 265 17 80 chr2 25445734 25446044 -225241810 + L1MEd LINE L1 2511 2779 -3436 2256 112 7 0 chr2 25446044 25446349 -225241505 + AluSx SINE Alu 1 307 -5 713 265 17 80 chr2 25446349 25446507 -225241347 + L1MEd LINE L1 2779 2945 -3270 690 267 83 56 chr2 25446512 25446537 -225241317 + L1MEd LINE L1 4049 4072 -2143 2360 155 46 12 chr2 25446537 25446951 -225240903 + MSTC LTR MaLR 1 428 0 690 267 83 56 chr2 25446951 25447290 -225240564 + L1MEd LINE L1 4072 4400 -1815 261 0 0 0 chr2 25447290 25447319 -225240535 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 8350 21 0 293 chr2 25447319 25449202 -225238652 + SVA Other Other 53 1383 -3 690 267 83 56 chr2 25449202 25449282 -225238572 + L1MEd LINE L1 4400 4476 -1739 2001 119 26 19 chr2 25449282 25449592 -225238262 + AluSx SINE Alu 1 312 0 690 267 83 56 chr2 25449592 25449755 -225238099 + L1MEd LINE L1 4476 4676 -1539 229 175 53 0 chr2 25449759 25449816 -225238038 + L1ME1 LINE L1 6106 6165 -1 477 208 15 128 chr2 25449851 25450116 -225237738 + L1MEd LINE L1 4685 4919 -1296 341 279 32 45 chr2 25450382 25450536 -225237318 + L1MEd LINE L1 4969 5120 -1095 229 141 71 71 chr2 25450655 25450740 -225237114 + MER112 DNA MER1_type 1 85 -175 301 277 65 43 chr2 25450799 25450983 -225236871 + MER112 DNA MER1_type 67 254 -6 186 311 0 151 chr2 25451106 25451160 -225236694 - MIR SINE MIR -99 109 77 7415 41 1 0 chr2 25451160 25452499 -225235355 + L1PA5 LINE L1 4812 6151 -3 186 311 0 151 chr2 25452499 25452550 -225235304 - MIR SINE MIR -131 77 20 204 182 0 0 chr2 25452663 25452707 -225235147 + (CA)n Simple_repeat Simple_repeat 2 45 0 188 284 17 97 chr2 25453536 25453712 -225234142 + MIR3 SINE MIR 20 181 -27 716 297 85 52 chr2 25453714 25454232 -225233622 + MLT1G1 LTR MaLR 1 535 -60 572 191 0 0 chr2 25454761 25454850 -225233004 + AluJ/FLAM SINE Alu 3 91 -221 2000 55 0 0 chr2 25454856 25455091 -225232763 + AluY SINE Alu 1 235 -76 189 0 0 0 chr2 25455575 25455596 -225232258 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 561 196 0 10 chr2 25455597 25455694 -225232160 - FLAM_A SINE Alu -46 96 1 2352 85 3 0 chr2 25455957 25456251 -225231603 - AluY SINE Alu -16 295 1 207 100 0 0 chr2 25456328 25456358 -225231496 + (TG)n Simple_repeat Simple_repeat 2 31 0 219 293 0 113 chr2 25456450 25456552 -225231302 + MER5A DNA MER1_type 36 121 -68 1904 158 14 3 chr2 25456552 25456843 -225231011 - AluJb SINE Alu -18 294 1 219 293 0 113 chr2 25456843 25456873 -225230981 + MER5A DNA MER1_type 121 153 -36 2310 94 3 3 chr2 25456888 25457185 -225230669 - AluSx SINE Alu -15 297 1 207 248 136 56 chr2 25457474 25457599 -225230255 + L2 LINE L2 3178 3312 -1 3981 98 9 0 chr2 25457884 25458433 -225229421 + MER41A LTR ERV1 1 554 0 1922 147 10 19 chr2 25458605 25458917 -225228937 + AluSx SINE Alu 1 309 -3 1821 137 88 0 chr2 25459232 25459516 -225228338 + AluSx SINE Alu 1 309 -3 1758 159 24 14 chr2 25459583 25459872 -225227982 - AluJb SINE Alu -20 292 1 2474 133 22 48 chr2 25460137 25460325 -225227529 + MER4E LTR ERV1 1 192 -587 2333 93 13 0 chr2 25460325 25460625 -225227229 + AluSx SINE Alu 1 304 -8 2474 133 22 48 chr2 25460625 25461047 -225226807 + MER4E LTR ERV1 192 779 0 471 265 88 21 chr2 25461145 25461428 -225226426 + L1M4 LINE L1 2214 2515 -3631 855 111 0 0 chr2 25461725 25461842 -225226012 + FLAM_C SINE Alu 2 118 -15 466 283 169 16 chr2 25461889 25462196 -225225658 + L1M4 LINE L1 2900 3253 -2893 249 299 10 31 chr2 25462196 25462293 -225225561 + MER5B DNA MER1_type 83 177 -1 340 25 0 0 chr2 25462615 25462655 -225225199 + L1PA16 LINE L1 6106 6145 -21 26 30 0 0 chr2 25462710 25462743 -225225111 + AT_rich Low_complexity Low_complexity 1 33 0 * 664 153 24 40 chr2 25462737 25462861 -225224993 + MER58B DNA MER1_type 218 339 -2 352 256 72 117 chr2 25462863 25463125 -225224729 + L1M4 LINE L1 3859 4131 -2015 2581 68 0 3 chr2 25463125 25463436 -225224418 - AluY SINE Alu -1 310 1 352 256 72 117 chr2 25463436 25463564 -225224290 + L1M4 LINE L1 4131 4225 -1921 1912 152 0 13 chr2 25463564 25463867 -225223987 + AluJb SINE Alu 1 299 -13 352 256 72 117 chr2 25463867 25463963 -225223891 + L1M4 LINE L1 4225 4324 -1822 433 210 43 72 chr2 25464357 25464495 -225223359 + L2 LINE L2 3161 3294 -19 222 292 75 89 chr2 25464568 25464810 -225223044 - L2 LINE L2 -354 2960 2723 2256 105 0 0 chr2 25464810 25465106 -225222748 + AluSx SINE Alu 1 296 -16 222 292 75 89 chr2 25465106 25465212 -225222642 - L2 LINE L2 -591 2723 2617 848 263 38 5 chr2 25465309 25465522 -225222332 - MIR SINE MIR -33 229 10 359 333 0 0 chr2 25465646 25465757 -225222097 - L3 LINE CR1 -11 1566 1456 2194 88 37 0 chr2 25467269 25467564 -225220290 + THE1A LTR MaLR 1 306 -49 183 156 0 0 chr2 25467564 25467596 -225220258 + A-rich Low_complexity Low_complexity 1 32 0 2328 110 13 0 chr2 25467606 25467943 -225219911 - AluSx SINE Alu 0 341 1 365 277 158 23 chr2 25468138 25468315 -225219539 - MIR SINE MIR -59 203 3 1267 163 34 0 chr2 25468415 25468624 -225219230 + MER20 DNA MER1_type 4 219 0 510 263 134 6 chr2 25468896 25469075 -225218779 + MIR SINE MIR 53 254 -8 237 289 0 0 chr2 25469213 25469258 -225218596 + LTR16C LTR ERVL 67 111 -380 1024 282 29 50 chr2 25469910 25470293 -225217561 + LTR16C LTR ERVL 103 477 -14 2126 118 3 10 chr2 25471023 25471320 -225216534 + AluSx SINE Alu 1 295 -17 4319 171 41 38 chr2 25471401 25471568 -225216286 + L1MC3 LINE L1 5107 5272 -874 1646 170 3 18 chr2 25471568 25471871 -225215983 + AluJo SINE Alu 3 301 0 4319 171 41 38 chr2 25471871 25472106 -225215748 + L1MC3 LINE L1 5272 4781 -1365 2422 101 0 0 chr2 25472106 25472413 -225215441 + AluSx SINE Alu 1 307 -5 4319 171 41 38 chr2 25472413 25473039 -225214815 + L1MC3 LINE L1 4780 5403 -743 733 164 16 8 chr2 25473061 25473189 -225214665 - AluJo SINE Alu -178 134 6 723 163 95 0 chr2 25473192 25473339 -225214515 + L1MC3 LINE L1 6118 6278 -1507 * 1032 219 8 4 chr2 25473335 25473573 -225214281 + L1ME1 LINE L1 2595 2833 -3313 * 1438 229 112 35 chr2 25473548 25474128 -225213726 + L1ME1 LINE L1 3154 3778 -2368 987 180 5 38 chr2 25474124 25474335 -225213519 + L1ME1 LINE L1 4735 4938 -1208 * 2300 120 36 31 chr2 25474334 25474726 -225213128 + L1MB7 LINE L1 5771 6164 -20 774 273 187 21 chr2 25474779 25475256 -225212598 - L1ME2 LINE L1 -283 5881 5326 260 277 141 5 chr2 25475375 25475559 -225212295 + L1ME1 LINE L1 5189 5397 -749 279 268 38 89 chr2 25475642 25475799 -225212055 + L1ME3 LINE L1 5961 6109 -53 481 267 162 37 chr2 25475853 25476004 -225211850 + L1ME1 LINE L1 5443 5574 -592 2266 113 0 3 chr2 25476004 25476313 -225211541 + AluSx SINE Alu 1 308 -4 481 267 162 37 chr2 25476313 25476560 -225211294 + L1ME1 LINE L1 5574 5903 -263 536 215 174 0 chr2 25476610 25476759 -225211095 + MER96 DNA MER1_type? 1 175 0 492 93 0 0 chr2 25476765 25476840 -225211014 + (CA)n Simple_repeat Simple_repeat 2 76 0 4751 70 3 2 chr2 25477031 25477641 -225210213 - L1PA8 LINE L1 -5 6167 5557 2223 258 119 40 chr2 25477777 25478743 -225209111 - Charlie7 DNA MER1_type -1450 1162 121 193 304 14 14 chr2 25478890 25478959 -225208895 - MIR SINE MIR -132 130 62 2159 122 0 0 chr2 25479476 25479770 -225208084 + AluY SINE Alu 1 294 -17 342 232 74 0 chr2 25480056 25480151 -225207703 + MIR SINE MIR 161 262 0 598 259 114 11 chr2 25480401 25480663 -225207191 + L1MC4a LINE L1 3875 4163 -1983 25 31 0 0 chr2 25480769 25480801 -225207053 + AT_rich Low_complexity Low_complexity 1 32 0 197 116 0 23 chr2 25481259 25481302 -225206552 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 2276 97 0 20 chr2 25481338 25481636 -225206218 + AluSx SINE Alu 1 292 -20 3172 167 65 35 chr2 25481798 25482089 -225205765 + L1MC2 LINE L1 5542 5823 -521 2572 65 0 0 chr2 25482089 25482395 -225205459 + AluY SINE Alu 1 306 -5 3172 167 65 35 chr2 25482395 25482811 -225205043 + L1MC2 LINE L1 5823 6270 -74 3213 140 52 2 chr2 25482876 25483432 -225204422 + L1MB3 LINE L1 5599 6182 -1 362 319 87 36 chr2 25483438 25483773 -225204081 + L1MC4a LINE L1 4914 5265 -881 963 135 377 0 chr2 25483835 25484050 -225203804 + AluJb SINE Alu 1 296 -6 307 331 74 0 chr2 25484208 25484371 -225203483 + L1MC4a LINE L1 5766 5940 -1868 419 331 29 0 chr2 25484679 25484815 -225203039 + MER91C DNA MER1_type 1 140 0 375 160 106 43 chr2 25484848 25484942 -225202912 + L1ME2 LINE L1 5987 6086 -78 2242 199 24 26 chr2 25484954 25485417 -225202437 + MER44D DNA MER2_type 89 605 0 286 206 31 20 chr2 25485417 25485509 -225202345 + L1ME2 LINE L1 6081 6334 0 189 203 10 0 chr2 25485665 25485713 -225202141 - MIR SINE MIR -63 145 104 279 0 0 0 chr2 25486335 25486366 -225201488 + (A)n Simple_repeat Simple_repeat 1 31 0 191 265 0 0 chr2 25486473 25486522 -225201332 - L2 LINE L2 0 3272 3224 27 49 0 0 chr2 25487206 25487247 -225200607 + GC_rich Low_complexity Low_complexity 1 41 0 240 207 43 52 chr2 25487713 25487829 -225200025 + (CGGG)n Simple_repeat Simple_repeat 3 117 0 29 47 0 0 chr2 25487841 25487884 -225199970 + GC_rich Low_complexity Low_complexity 1 43 0 234 0 0 0 chr2 25488717 25488743 -225199111 + (CCTG)n Simple_repeat Simple_repeat 2 27 0 2268 97 3 3 chr2 25488866 25489164 -225198690 + AluSx SINE Alu 1 298 -14 198 294 140 79 chr2 25490248 25490424 -225197430 + L2 LINE L2 2425 2624 -690 2214 106 0 10 chr2 25490424 25490725 -225197129 - AluSx SINE Alu -14 298 1 198 294 140 79 chr2 25490725 25490813 -225197041 + L2 LINE L2 2624 2705 -609 2480 86 0 3 chr2 25491235 25491548 -225196306 + AluSq SINE Alu 1 312 -1 261 303 64 117 chr2 25491597 25491729 -225196125 + MLT1H1 LTR MaLR 68 189 -366 2357 95 7 0 chr2 25491729 25492034 -225195820 - AluSg SINE Alu -3 307 1 261 303 64 117 chr2 25492034 25492089 -225195765 + MLT1H1 LTR MaLR 189 245 -310 788 208 68 31 chr2 25492134 25492326 -225195528 + MLT1H1 LTR MaLR 339 537 -18 860 205 100 0 chr2 25492567 25492767 -225195087 - MER58A DNA MER1_type -3 221 2 767 157 8 0 chr2 25492868 25492989 -225194865 - MLT1B LTR MaLR 0 390 269 714 206 0 0 chr2 25492989 25493115 -225194739 + AluJo/FLAM SINE Alu 5 130 -172 1891 110 78 11 chr2 25493115 25493396 -225194458 - AluSx SINE Alu -12 300 1 861 67 0 5 chr2 25493417 25493612 -225194242 - AluY SINE Alu -18 293 2 980 107 7 7 chr2 25493614 25493754 -225194100 - MLT1B LTR MaLR -214 176 37 1969 173 37 25 chr2 25493754 25494303 -225193551 + L1MB8 LINE L1 5006 5547 -631 2306 97 0 10 chr2 25494303 25494611 -225193243 - AluSg SINE Alu -5 305 1 1969 173 37 25 chr2 25494611 25494871 -225192983 + L1MB8 LINE L1 5547 6169 -9 1656 179 17 20 chr2 25494872 25495194 -225192660 - AluJb SINE Alu 0 312 1 2325 57 0 7 chr2 25495197 25495519 -225192335 - AluY SINE Alu 0 320 1 531 297 70 35 chr2 25495618 25495988 -225191866 + L1MC4a LINE L1 4540 4922 -1224 2226 87 10 7 chr2 25495996 25496285 -225191569 + AluSx SINE Alu 9 298 -14 1155 259 59 43 chr2 25496312 25496687 -225191167 + L1MC4a LINE L1 5491 5871 -1937 1332 168 0 9 chr2 25496690 25496910 -225190944 - AluJb SINE Alu -8 304 87 2115 114 3 29 chr2 25497158 25497464 -225190390 + AluSx SINE Alu 1 298 -14 936 288 102 25 chr2 25497469 25497841 -225190013 + L1ME4a LINE L1 5304 5741 -429 2093 138 7 0 chr2 25497841 25498146 -225189708 - AluSx SINE Alu -5 307 1 936 288 102 25 chr2 25498146 25498370 -225189484 + L1ME4a LINE L1 5741 5946 -224 479 230 54 7 chr2 25498601 25498749 -225189105 + L1ME4a LINE L1 5967 6121 0 180 0 0 0 chr2 25499083 25499103 -225188751 + (CCCCCA)n Simple_repeat Simple_repeat 3 22 0 889 187 0 35 chr2 25500183 25500354 -225187500 - FRAM SINE Alu -19 157 1 2154 118 20 0 chr2 25500585 25500881 -225186973 - AluSx SINE Alu -6 306 5 1920 151 6 19 chr2 25501311 25501623 -225186231 + AluJo SINE Alu 1 308 -4 2175 104 7 3 chr2 25502124 25502421 -225185433 - AluSq SINE Alu -13 300 3 2388 64 7 3 chr2 25502653 25502950 -225184904 - AluY SINE Alu -13 298 1 2157 83 3 64 chr2 25503137 25503450 -225184404 + AluSg SINE Alu 2 295 -15 2045 132 3 20 chr2 25503538 25503841 -225184013 + AluJo SINE Alu 1 298 -14 1816 159 23 7 chr2 25503900 25504201 -225183653 - AluJo SINE Alu -6 306 1 691 265 158 32 chr2 25504280 25504755 -225183099 + MLT1F LTR MaLR 1 535 -7 1899 130 58 0 chr2 25505044 25505336 -225182518 + AluSx SINE Alu 1 309 -3 2025 122 7 26 chr2 25505774 25506125 -225181729 - AluSx SINE Alu 0 312 1 2064 137 0 3 chr2 25506579 25506879 -225180975 - AluSc SINE Alu -10 299 1 251 171 0 0 chr2 25506884 25506925 -225180929 - Alu SINE Alu -9 293 253 319 282 96 53 chr2 25507169 25507357 -225180497 + MLT1H LTR MaLR 115 310 -239 235 229 19 105 chr2 25507454 25507559 -225180295 + MLT1H LTR MaLR 454 549 0 1876 168 27 0 chr2 25507585 25507883 -225179971 + AluJb SINE Alu 3 308 -4 2753 36 0 0 chr2 25507999 25508306 -225179548 + AluY SINE Alu 1 307 -4 2207 121 0 0 chr2 25508420 25508717 -225179137 - AluSq SINE Alu -16 297 1 2362 89 0 0 chr2 25508778 25509069 -225178785 + AluSx SINE Alu 1 291 -21 188 238 309 0 chr2 25509288 25509372 -225178482 + MIR3 SINE MIR 93 202 -6 2288 116 3 0 chr2 25509372 25509675 -225178179 - AluSq SINE Alu -9 304 1 1920 152 14 7 chr2 25509685 25509982 -225177872 - AluJb SINE Alu -13 299 1 343 275 243 0 chr2 25510116 25510396 -225177458 + L1ME4a LINE L1 5545 5892 -229 2175 116 3 16 chr2 25510499 25510802 -225177052 + AluSx SINE Alu 1 299 -13 1495 183 17 43 chr2 25510891 25511192 -225176662 - AluJo SINE Alu -19 293 1 720 146 0 0 chr2 25511210 25511320 -225176534 - HY1 scRNA scRNA -2 110 1 2600 48 0 0 chr2 25513878 25514171 -225173683 + AluY SINE Alu 1 293 -18 1017 151 11 16 chr2 25514171 25514356 -225173498 - L1MB3 LINE L1 -9 6174 5991 1082 152 29 82 chr2 25514839 25514897 -225172957 + AluJo SINE Alu 72 132 -180 2092 135 0 7 chr2 25514897 25515193 -225172661 - AluSx SINE Alu -18 294 1 1082 152 29 82 chr2 25515193 25515378 -225172476 + AluJo SINE Alu 132 302 -10 1775 155 14 7 chr2 25515387 25515683 -225172171 + AluJb SINE Alu 5 302 -10 29 0 0 0 chr2 25517114 25517143 -225170711 + AT_rich Low_complexity Low_complexity 1 29 0 2293 121 0 13 chr2 25517288 25517603 -225170251 + AluSq SINE Alu 1 311 -2 7551 112 21 28 chr2 25517712 25518288 -225169566 + Tigger1 DNA MER2_type 6 585 -1833 2348 114 0 0 chr2 25518288 25518596 -225169258 - AluSc SINE Alu -1 308 1 2271 93 14 0 chr2 25518596 25518887 -225168967 - AluSg SINE Alu -15 295 1 7551 112 21 28 chr2 25518887 25519185 -225168669 + Tigger1 DNA MER2_type 584 872 -1546 11194 43 11 35 chr2 25519185 25520594 -225167260 + SVA Other Other 7 1381 -5 7551 112 21 28 chr2 25520594 25520881 -225166973 + Tigger1 DNA MER2_type 872 1160 -1258 2491 79 0 0 chr2 25520881 25521184 -225166670 - AluY SINE Alu -8 303 1 1035 165 18 6 chr2 25521193 25521357 -225166497 - FAM SINE Alu -9 166 1 2310 94 7 3 chr2 25521383 25521681 -225166173 - AluSx SINE Alu -13 299 1 2474 75 0 0 chr2 25521687 25521982 -225165872 - AluSg SINE Alu -15 295 1 858 114 0 0 chr2 25521983 25522097 -225165757 + Tigger1 DNA MER2_type 2304 2417 -1 2050 122 30 7 chr2 25523012 25523315 -225164539 + AluSx SINE Alu 3 312 0 1633 229 125 77 chr2 25523738 25523953 -225163901 + L1M4 LINE L1 2953 3156 -2990 2357 72 0 13 chr2 25523953 25524260 -225163594 + AluY SINE Alu 1 303 -8 1733 161 0 75 chr2 25524270 25524416 -225163438 + AluJo SINE Alu 1 111 -201 2051 122 25 4 chr2 25524416 25524717 -225163137 + AluSx SINE Alu 1 307 0 1733 161 0 75 chr2 25524717 25524904 -225162950 + AluJo SINE Alu 111 310 -2 1633 229 125 77 chr2 25524904 25525231 -225162623 + L1M4 LINE L1 3164 3474 -2672 1763 158 11 11 chr2 25525231 25525515 -225162339 - AluJo SINE Alu -28 284 1 1633 229 125 77 chr2 25525515 25525558 -225162296 + L1M4 LINE L1 3474 3514 -2632 2221 81 0 0 chr2 25525558 25525831 -225162023 + AluSx SINE Alu 34 306 -6 1633 229 125 77 chr2 25525831 25526033 -225161821 + L1M4 LINE L1 3514 3791 -2355 965 185 0 36 chr2 25526102 25526297 -225161557 - LTR2B LTR ERV1 0 490 303 348 259 24 82 chr2 25526287 25526457 -225161397 - LTR2 LTR ERV1 -289 160 1 * 2178 185 25 0 chr2 25526459 25526865 -225160989 + L1M4 LINE L1 3781 4196 -1950 1900 185 42 45 chr2 25526901 25527092 -225160762 + MLT1C LTR MaLR 1 191 -276 2268 125 0 0 chr2 25527092 25527403 -225160451 + AluSx SINE Alu 1 311 -1 1900 185 42 45 chr2 25527403 25527494 -225160360 + MLT1C LTR MaLR 191 281 -186 2471 94 0 0 chr2 25527494 25527803 -225160051 + AluSq SINE Alu 1 309 -4 1900 185 42 45 chr2 25527803 25527968 -225159886 + MLT1C LTR MaLR 281 448 -19 530 101 0 38 chr2 25527970 25528049 -225159805 - AluSq/x SINE Alu -183 130 55 435 300 181 13 chr2 25528059 25528296 -225159558 + MLT1L LTR MaLR 1 277 -338 925 190 70 162 chr2 25528424 25528641 -225159213 - L2 LINE L2 -664 2650 2415 1868 153 30 3 chr2 25528641 25528941 -225158913 + AluJb SINE Alu 5 312 0 925 190 70 162 chr2 25528941 25529292 -225158562 - L2 LINE L2 -899 2415 2134 184 188 188 0 chr2 25529424 25529488 -225158366 - MIR SINE MIR -24 238 163 2227 120 0 0 chr2 25529752 25530052 -225157802 + AluSq SINE Alu 9 308 -5 336 82 2 0 chr2 25530065 25530112 -225157742 + Alu SINE Alu 2 43 -256 189 0 0 0 chr2 25530365 25530386 -225157468 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2151 118 0 0 chr2 25530388 25530667 -225157187 - AluSg SINE Alu -31 279 1 229 340 115 64 chr2 25530773 25531085 -225156769 + L2 LINE L2 2945 3272 0 2167 116 0 26 chr2 25531506 25531808 -225156046 + AluSx SINE Alu 1 294 -18 290 273 18 55 chr2 25532004 25532114 -225155740 + L2 LINE L2 3129 3234 -79 1813 112 51 40 chr2 25532190 25532489 -225155365 - AluSc SINE Alu 0 302 1 1740 123 9 86 chr2 25532494 25532819 -225155035 - AluJb SINE Alu -12 300 1 402 21 0 0 chr2 25533685 25533732 -225154122 + (TG)n Simple_repeat Simple_repeat 2 48 0 332 286 16 40 chr2 25534195 25534321 -225153533 + MIR SINE MIR 29 151 -111 252 253 88 11 chr2 25534813 25534904 -225152950 + MIR SINE MIR 153 250 -12 210 388 10 0 chr2 25534915 25535013 -225152841 - L2 LINE L2 -13 3300 3202 1037 161 13 61 chr2 25535180 25535410 -225152444 + MER20 DNA MER1_type 1 219 0 195 42 0 0 chr2 25536025 25536049 -225151805 + (GA)n Simple_repeat Simple_repeat 2 25 0 575 65 39 0 chr2 25536336 25536413 -225151441 - MADE1 DNA Mariner 0 80 1 7156 49 20 33 chr2 25536770 25538281 -225149573 - SVA Other Other -799 1380 47 339 329 52 0 chr2 25539302 25539457 -225148397 + MIR SINE MIR 50 212 -50 216 0 0 0 chr2 25539667 25539691 -225148163 + (A)n Simple_repeat Simple_repeat 1 24 0 1341 229 93 14 chr2 25539761 25539974 -225147880 - MSTD LTR MaLR 0 396 201 1666 161 0 51 chr2 25539974 25540285 -225147569 - AluJo SINE Alu -17 295 1 1341 229 93 14 chr2 25540285 25540438 -225147416 - MSTD LTR MaLR -195 201 1 3917 51 4 0 chr2 25541089 25541562 -225146292 - L1PA6 LINE L1 0 6154 5680 1376 194 127 53 chr2 25542152 25542173 -225145681 - Charlie1 DNA MER1_type -696 2065 2047 351 0 0 0 chr2 25542173 25542212 -225145642 + (TG)n Simple_repeat Simple_repeat 2 40 0 1376 194 127 53 chr2 25542212 25542359 -225145495 - Charlie1 DNA MER1_type -714 2047 1912 2441 84 0 10 chr2 25542359 25542667 -225145187 - AluSx SINE Alu -5 307 3 1376 194 127 53 chr2 25542667 25542914 -225144940 - Charlie1 DNA MER1_type -849 1912 1618 2344 87 0 0 chr2 25542923 25543234 -225144620 + AluY SINE Alu 1 311 0 804 273 18 7 chr2 25543283 25543561 -225144293 + L1ME1 LINE L1 2910 3190 -2956 2925 220 103 48 chr2 25543573 25544485 -225143369 + L1ME1 LINE L1 3815 4800 -1346 2064 99 11 21 chr2 25544485 25544767 -225143087 + AluSg SINE Alu 6 284 -26 2925 220 103 48 chr2 25544767 25544965 -225142889 + L1ME1 LINE L1 4800 4986 -1160 2659 200 154 14 chr2 25544970 25545685 -225142169 + L1ME1 LINE L1 5340 6311 -23 2075 117 7 10 chr2 25545685 25545975 -225141879 - AluSq SINE Alu -24 289 1 1215 196 26 0 chr2 25546076 25546305 -225141549 - AluJo SINE Alu -20 292 58 2752 140 137 17 chr2 25546607 25547185 -225140669 - L1MB3 LINE L1 -11 6172 5526 1308 211 261 8 chr2 25547197 25547675 -225140179 - L1MB3 LINE L1 -807 5339 4741 22 0 0 0 chr2 25548187 25548209 -225139645 + AT_rich Low_complexity Low_complexity 1 22 0 248 282 90 0 chr2 25550156 25550234 -225137620 + L2 LINE L2 3229 3313 0 25 31 0 0 chr2 25552304 25552336 -225135518 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 25553501 25553522 -225134332 + AT_rich Low_complexity Low_complexity 1 21 0 233 148 19 37 chr2 25554754 25554808 -225133046 + A-rich Low_complexity Low_complexity 2 54 0 405 0 0 0 chr2 25559067 25559112 -225128742 + (CA)n Simple_repeat Simple_repeat 1 45 0 183 306 41 31 chr2 25559233 25559331 -225128523 + MER5B DNA MER1_type 1 99 -79 2098 125 0 7 chr2 25559348 25559644 -225128210 - AluSg SINE Alu -16 294 1 2378 96 6 6 chr2 25559765 25560077 -225127777 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 25560248 25560269 -225127585 + AT_rich Low_complexity Low_complexity 1 21 0 221 290 0 0 chr2 25560614 25560683 -225127171 + A-rich Low_complexity Low_complexity 3 71 0 1392 144 20 48 chr2 25561032 25561342 -225126512 + MER2 DNA MER2_type 1 345 0 1815 140 9 65 chr2 25562018 25562340 -225125514 + AluSg SINE Alu 1 304 -6 2190 92 7 24 chr2 25562357 25562649 -225125205 + AluSx SINE Alu 10 296 -16 762 256 116 0 chr2 25564699 25564906 -225122948 + MIR SINE MIR 32 262 0 1911 170 20 0 chr2 25565489 25565795 -225122059 + AluJb SINE Alu 1 312 0 1740 163 42 7 chr2 25565920 25566203 -225121651 - AluJb SINE Alu -19 293 1 2173 112 13 3 chr2 25566697 25567002 -225120852 + AluSq SINE Alu 1 308 -5 2120 96 24 10 chr2 25567103 25567395 -225120459 - AluSp SINE Alu -17 296 1 186 103 0 0 chr2 25567533 25567562 -225120292 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 309 280 27 75 chr2 25569307 25569493 -225118361 + MER5B DNA MER1_type 1 177 -1 248 224 13 0 chr2 25569622 25569698 -225118156 + L1MB7 LINE L1 6108 6184 0 317 326 11 0 chr2 25569821 25569910 -225117944 + MER5A DNA MER1_type 50 139 -50 24 67 0 0 chr2 25570320 25570365 -225117489 + AT_rich Low_complexity Low_complexity 1 45 0 279 79 0 0 chr2 25570585 25570623 -225117231 + (A)n Simple_repeat Simple_repeat 1 38 0 814 264 42 5 chr2 25570783 25570999 -225116855 - MER58A DNA MER1_type 0 224 1 255 323 87 24 chr2 25571053 25571180 -225116674 - L3 LINE CR1 -103 1474 1340 1991 80 0 112 chr2 25571488 25571826 -225116028 + AluSg SINE Alu 1 300 0 326 254 0 0 chr2 25571849 25571912 -225115942 + L3 LINE CR1 1507 1569 -8 180 0 0 0 chr2 25572053 25572073 -225115781 + (A)n Simple_repeat Simple_repeat 1 20 0 208 266 53 43 chr2 25572583 25572677 -225115177 - MIR3 SINE MIR -15 193 99 2244 108 0 0 chr2 25573090 25573386 -225114468 - AluSx SINE Alu -16 296 1 29 28 0 0 chr2 25574306 25574342 -225113512 + AT_rich Low_complexity Low_complexity 1 36 0 226 250 54 9 chr2 25574351 25574463 -225113391 + L1MC/D LINE L1 5217 5333 -813 357 255 156 82 chr2 25574521 25574752 -225113102 + L1MC/D LINE L1 5412 5659 -2149 560 309 100 31 chr2 25574771 25575121 -225112733 + L1MEd LINE L1 586 959 -5160 386 315 67 30 chr2 25575278 25575524 -225112330 + L1MEd LINE L1 1012 1282 -4849 2410 67 3 0 chr2 25575524 25575824 -225112030 + AluY SINE Alu 1 301 -10 386 315 67 30 chr2 25575824 25576009 -225111845 + L1MEd LINE L1 1282 1459 -4672 2226 120 3 0 chr2 25576515 25576824 -225111030 + AluSx SINE Alu 1 310 -2 328 276 126 36 chr2 25576883 25577303 -225110551 + L1MEd LINE L1 2114 2571 -3558 2302 84 0 20 chr2 25577335 25577634 -225110220 + AluSg SINE Alu 1 293 -17 970 195 81 5 chr2 25577799 25578020 -225109834 - MIR SINE MIR -21 241 4 390 181 23 90 chr2 25578064 25578197 -225109657 + L1MEd LINE L1 2805 2928 -3201 341 298 5 58 chr2 25578358 25578460 -225109394 - L1MC4a LINE L1 -1927 5881 5792 1378 99 43 52 chr2 25578460 25578692 -225109162 + MER30 DNA MER1_type 1 230 0 341 298 5 58 chr2 25578692 25578777 -225109077 - L1MC4a LINE L1 -2016 5792 5704 2328 73 10 3 chr2 25579335 25579638 -225108216 + AluY SINE Alu 1 305 -6 242 342 45 18 chr2 25579896 25580007 -225107847 + L2 LINE L2 3192 3305 -8 22 0 0 0 chr2 25580115 25580137 -225107717 + AT_rich Low_complexity Low_complexity 1 22 0 620 299 76 23 chr2 25580207 25580639 -225107215 - HAL1 LINE L1 -933 1574 1120 445 279 73 59 chr2 25580791 25580995 -225106859 - HAL1 LINE L1 -1877 630 424 1388 155 4 4 chr2 25582443 25582669 -225105185 - AluJb SINE Alu -20 292 67 22 0 0 0 chr2 25582768 25582790 -225105064 + AT_rich Low_complexity Low_complexity 1 22 0 192 97 0 0 chr2 25582962 25582993 -225104861 + (CTG)n Simple_repeat Simple_repeat 2 32 0 448 36 0 0 chr2 25583152 25583208 -225104646 + U2 snRNA snRNA 2 57 -131 983 142 0 13 chr2 25584329 25584484 -225103370 - AluSx SINE Alu -3 309 157 613 103 0 11 chr2 25584485 25584572 -225103282 - AluSx SINE Alu -226 86 1 1922 114 111 0 chr2 25584604 25584884 -225102970 + AluSp SINE Alu 1 311 -2 335 206 10 39 chr2 25584894 25584996 -225102858 + L1MEd LINE L1 3835 3933 -2196 2172 101 14 3 chr2 25585087 25585374 -225102480 + AluSc SINE Alu 1 290 -19 21 0 0 0 chr2 25586414 25586435 -225101419 + AT_rich Low_complexity Low_complexity 1 21 0 2256 105 13 0 chr2 25586582 25586888 -225100966 + AluSp SINE Alu 1 310 -3 2289 92 3 0 chr2 25587058 25587352 -225100502 + AluSx SINE Alu 1 295 -17 2511 63 0 3 chr2 25587515 25587816 -225100038 + AluY SINE Alu 1 300 -11 1946 136 25 0 chr2 25587886 25588172 -225099682 + AluSx SINE Alu 1 293 -19 1200 113 11 0 chr2 25588227 25588404 -225099450 + L1PA15 LINE L1 5981 6159 -6 26 0 0 0 chr2 25588457 25588483 -225099371 + AT_rich Low_complexity Low_complexity 1 26 0 550 276 121 22 chr2 25588516 25589197 -225098657 - L1ME3 LINE L1 -154 6008 5258 1633 107 71 119 chr2 25589221 25589260 -225098594 + THE1C LTR MaLR 1 40 -335 2406 97 0 0 chr2 25589260 25589559 -225098295 - AluSq SINE Alu -14 299 1 1633 107 71 119 chr2 25589559 25589913 -225097941 + THE1C LTR MaLR 40 375 0 322 278 8 8 chr2 25590008 25590134 -225097720 - L1ME3 LINE L1 -1043 5103 4978 2303 194 92 19 chr2 25590202 25590819 -225097035 - L1MB7 LINE L1 -58 6126 5465 1176 178 9 14 chr2 25591233 25591446 -225096408 - AluJo SINE Alu -25 287 76 234 145 17 48 chr2 25591490 25591731 -225096123 + AluJb SINE Alu 1 296 -6 21 0 0 0 chr2 25591817 25591838 -225096016 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 25592053 25592082 -225095772 + AT_rich Low_complexity Low_complexity 1 29 0 273 271 176 0 chr2 25592115 25592200 -225095654 - MIR SINE MIR -111 151 52 859 237 173 39 chr2 25592236 25592675 -225095179 + MLT1D LTR MaLR 8 505 0 474 262 40 25 chr2 25592801 25593003 -225094851 - L1MC4 LINE L1 -1048 6994 6790 251 280 10 50 chr2 25593017 25593129 -225094725 - L1MC5 LINE L1 -1225 6770 6637 2212 109 3 31 chr2 25593207 25593529 -225094325 - AluSq SINE Alu 0 313 1 1945 121 68 0 chr2 25594002 25594282 -225093572 - AluSq SINE Alu -14 299 1 285 163 0 0 chr2 25594349 25594398 -225093456 - Alu SINE Alu -4 304 256 540 296 43 27 chr2 25594424 25594597 -225093257 - L1MC5 LINE L1 -1939 5869 5689 705 260 44 0 chr2 25594597 25594778 -225093076 + MER5A DNA MER1_type 1 189 0 540 296 43 27 chr2 25594778 25594861 -225092993 - L1MC5 LINE L1 -2119 5689 5609 2009 72 12 0 chr2 25594937 25595186 -225092668 + AluY SINE Alu 1 252 -59 192 77 0 0 chr2 25595191 25595217 -225092637 + (A)n Simple_repeat Simple_repeat 1 26 0 858 174 13 0 chr2 25595381 25595553 -225092301 + AluSq SINE Alu 134 307 0 235 89 0 44 chr2 25595685 25595730 -225092124 - AluJo SINE Alu -1 301 259 1012 160 68 48 chr2 25595730 25595802 -225092052 - AluJo SINE Alu -90 222 153 2046 100 24 3 chr2 25595802 25596092 -225091762 - AluSg SINE Alu -14 296 1 1012 160 68 48 chr2 25596092 25596225 -225091629 - AluJo SINE Alu -159 153 13 256 287 6 96 chr2 25596257 25596394 -225091460 - L1 LINE L1 -1896 4250 4139 2141 115 0 3 chr2 25596394 25596702 -225091152 + AluSx SINE Alu 1 307 0 256 287 6 96 chr2 25596702 25596792 -225091062 - L1 LINE L1 -2007 4139 4042 2286 105 0 10 chr2 25596977 25597290 -225090564 + AluSx SINE Alu 1 310 -2 312 266 83 41 chr2 25597607 25597776 -225090078 - L1 LINE L1 -2975 3171 2996 1605 155 40 34 chr2 25597778 25597905 -225089949 + AluJb SINE Alu 1 126 -186 2149 104 0 0 chr2 25597905 25598231 -225089623 + AluSg SINE Alu 1 326 0 1605 155 40 34 chr2 25598231 25598399 -225089455 + AluJb SINE Alu 126 299 -13 1613 245 44 13 chr2 25598599 25599052 -225088802 - MLT1C LTR MaLR 0 467 1 1837 146 4 0 chr2 25599342 25599652 -225088202 - AluSx SINE Alu 0 315 5 2041 136 3 3 chr2 25599685 25599979 -225087875 - AluSx SINE Alu -18 294 1 446 270 132 65 chr2 25600107 25600372 -225087482 + L1M4 LINE L1 3740 3986 -2160 2324 101 0 0 chr2 25600372 25600670 -225087184 - AluSc SINE Alu -11 298 1 446 270 132 65 chr2 25600670 25600702 -225087152 + L1M4 LINE L1 3986 4014 -2132 2105 132 0 7 chr2 25600702 25601005 -225086849 + AluSx SINE Alu 1 301 -11 446 270 132 65 chr2 25601005 25601250 -225086604 + L1M4 LINE L1 4014 4316 -1830 1121 265 56 36 chr2 25601250 25601696 -225086158 + LTR40c LTR ERVL 5 459 -6 918 247 114 42 chr2 25601705 25602389 -225085465 + L1M4 LINE L1 4301 5033 -1113 959 256 118 4 chr2 25602492 25603041 -225084813 - L1M1 LINE L1 -495 5667 5155 376 253 50 68 chr2 25603069 25603290 -225084564 - L1M4 LINE L1 -1386 4760 4544 423 260 95 18 chr2 25603548 25603717 -225084137 + L1ME3A LINE L1 5952 6133 -37 1061 165 55 5 chr2 25603725 25603943 -225083911 + MER46A DNA MER2_type 1 229 -7 238 273 50 40 chr2 25603957 25604056 -225083798 + L1ME3A LINE L1 5910 6009 -161 257 188 109 31 chr2 25604269 25604333 -225083521 + MER5C DNA MER1_type 56 124 -200 212 266 38 0 chr2 25604507 25604586 -225083268 + A-rich Low_complexity Low_complexity 1 82 0 1831 180 23 0 chr2 25604923 25605228 -225082626 - AluJo SINE Alu 0 312 1 2230 98 0 3 chr2 25605338 25605634 -225082220 + AluSg SINE Alu 1 295 -15 2019 130 0 17 chr2 25606140 25606433 -225081421 - AluJo SINE Alu -24 288 1 2281 102 0 10 chr2 25606732 25607037 -225080817 - AluSx SINE Alu -10 302 1 1879 128 72 0 chr2 25607102 25607392 -225080462 + AluSx SINE Alu 1 311 -1 28 0 0 0 chr2 25609908 25609936 -225077918 + AT_rich Low_complexity Low_complexity 1 28 0 315 164 0 30 chr2 25610931 25610998 -225076856 - MER3 DNA MER1_type -4 205 141 3182 159 35 26 chr2 25611002 25611300 -225076554 + L1MC1 LINE L1 4924 5218 -1115 2293 102 0 0 chr2 25611300 25611604 -225076250 + AluSg SINE Alu 5 308 -2 3182 159 35 26 chr2 25611604 25612172 -225075682 + L1MC1 LINE L1 5218 5799 -534 1883 99 21 0 chr2 25612186 25612468 -225075386 + L1PA13 LINE L1 5876 6163 0 2687 135 50 28 chr2 25612469 25612613 -225075241 + L1MC1 LINE L1 5816 5955 -378 2249 110 0 0 chr2 25612613 25612904 -225074950 + AluSq SINE Alu 1 291 -22 2687 135 50 28 chr2 25612904 25613254 -225074600 + L1MC1 LINE L1 5955 6321 -12 553 218 8 38 chr2 25613266 25613399 -225074455 - MER3 DNA MER1_type -80 129 1 834 159 7 21 chr2 25613994 25614139 -225073715 + FLAM_C SINE Alu 1 143 0 1723 162 13 26 chr2 25614143 25614445 -225073409 + AluJb SINE Alu 1 298 -14 613 269 122 46 chr2 25614761 25614999 -225072855 + MIR SINE MIR 6 261 -1 1892 150 3 29 chr2 25615060 25615366 -225072488 - AluJb SINE Alu -14 298 1 255 292 0 34 chr2 25616509 25616598 -225071256 + MER21B LTR ERV1 1 86 -777 329 293 0 0 chr2 25616623 25616698 -225071156 + MER21B LTR ERV1 20 94 -769 2975 176 64 41 chr2 25616699 25616980 -225070874 + MER21B LTR ERV1 48 321 -542 2159 105 0 3 chr2 25616980 25617265 -225070589 + AluSx SINE Alu 1 284 -28 333 0 0 0 chr2 25617265 25617302 -225070552 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2975 176 64 41 chr2 25617302 25617679 -225070175 + MER21B LTR ERV1 320 722 -141 1741 156 13 13 chr2 25617679 25617987 -225069867 - MER1B DNA MER1_type 0 339 32 536 204 117 0 chr2 25617990 25618127 -225069727 + MER21B LTR ERV1 710 862 -1 434 335 56 14 chr2 25619168 25619383 -225068471 + ERVL LTR ERVL 4851 5074 -690 1854 183 3 0 chr2 25619383 25619694 -225068160 + AluSx SINE Alu 1 312 0 2008 112 36 0 chr2 25619852 25620130 -225067724 + AluSx SINE Alu 1 288 -24 1454 197 3 43 chr2 25620776 25620921 -225066933 + AluJo SINE Alu 1 129 -183 1726 177 3 0 chr2 25620921 25621215 -225066639 + AluJb SINE Alu 1 295 -17 1454 197 3 43 chr2 25621215 25621373 -225066481 + AluJo SINE Alu 129 292 -20 381 269 219 0 chr2 25621849 25622009 -225065845 + MLT1K LTR MaLR 359 553 -35 2194 94 0 0 chr2 25622084 25622359 -225065495 + AluSx SINE Alu 1 275 -37 203 0 0 36 chr2 25622363 25622391 -225065463 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 350 321 70 27 chr2 25622413 25622600 -225065254 + MIR SINE MIR 20 214 -48 1956 130 3 7 chr2 25622967 25623293 -225064561 - AluSx SINE Alu 0 325 1 32 43 0 0 chr2 25624222 25624268 -225063586 + AT_rich Low_complexity Low_complexity 1 46 0 347 267 61 8 chr2 25625140 25625271 -225062583 + MLT1K LTR MaLR 10 147 -441 324 0 0 0 chr2 25625303 25625339 -225062515 + (CA)n Simple_repeat Simple_repeat 2 37 0 2092 128 3 0 chr2 25625652 25625948 -225061906 - AluSx SINE Alu -15 297 1 453 278 108 45 chr2 25628180 25628263 -225059591 + L1MB7 LINE L1 4968 5044 -1120 1595 145 83 25 chr2 25628263 25628372 -225059482 + AluJb SINE Alu 3 104 -208 405 0 0 0 chr2 25628372 25628417 -225059437 + (CA)n Simple_repeat Simple_repeat 2 46 0 1595 145 83 25 chr2 25628417 25628608 -225059246 + AluJb SINE Alu 104 312 0 453 278 108 45 chr2 25628608 25628966 -225058888 + L1MB7 LINE L1 5044 5449 -715 230 119 24 0 chr2 25629000 25629042 -225058812 + L1MC4a LINE L1 7649 7691 -117 23 33 0 0 chr2 25629049 25629079 -225058775 + AT_rich Low_complexity Low_complexity 1 30 0 2132 114 7 10 chr2 25629079 25629369 -225058485 - AluSx SINE Alu -23 289 1 532 207 16 0 chr2 25629369 25629490 -225058364 + L1MD2 LINE L1 6221 6343 -16 2092 121 3 7 chr2 25629497 25629802 -225058052 + AluSq SINE Alu 6 309 -4 319 281 65 78 chr2 25629806 25630112 -225057742 + L1MB7 LINE L1 5480 5781 -2027 404 312 64 0 chr2 25630191 25630316 -225057538 - MIR SINE MIR -74 188 56 1071 246 74 3 chr2 25630592 25630901 -225056953 - MER46C DNA MER2_type 0 338 8 2557 58 0 0 chr2 25631084 25631392 -225056462 + AluY SINE Alu 1 308 -3 248 194 113 16 chr2 25632198 25632260 -225055594 + MIR SINE MIR 84 151 -111 196 278 129 48 chr2 25632423 25632632 -225055222 + L2 LINE L2 2648 2873 -441 304 327 159 9 chr2 25632964 25633184 -225054670 + MLT1K LTR MaLR 336 588 0 815 196 72 0 chr2 25633415 25633568 -225054286 + AluSg/x SINE Alu 132 295 -15 509 212 133 35 chr2 25634047 25634158 -225053696 + HAL1b LINE L1 429 528 -820 2039 128 14 0 chr2 25634158 25634447 -225053407 + AluSx SINE Alu 1 293 -19 509 212 133 35 chr2 25634447 25634561 -225053293 + HAL1b LINE L1 528 676 -672 2082 113 0 7 chr2 25635554 25635837 -225052017 + AluSx SINE Alu 15 295 -17 386 185 146 54 chr2 25635901 25636106 -225051748 + L1MC4 LINE L1 7001 7224 -818 1557 238 145 17 chr2 25636106 25636622 -225051232 + MLT1E LTR MaLR 1 582 -11 2087 207 124 49 chr2 25636630 25637216 -225050638 + L1MC4 LINE L1 7221 7762 -280 198 0 0 0 chr2 25637216 25637238 -225050616 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1718 154 11 28 chr2 25637240 25637526 -225050328 - AluJo SINE Alu -31 281 1 2087 207 124 49 chr2 25637526 25637686 -225050168 + L1MC4 LINE L1 7762 8026 -16 694 232 165 14 chr2 25637765 25638052 -225049802 + L1MB7 LINE L1 5810 6141 -43 1663 175 7 48 chr2 25638054 25638196 -225049658 + AluJo SINE Alu 1 147 -165 2152 88 6 41 chr2 25638196 25638515 -225049339 + AluSp SINE Alu 1 308 -5 1663 175 7 48 chr2 25638515 25638681 -225049173 + AluJo SINE Alu 147 296 -16 236 163 41 0 chr2 25638734 25638783 -225049071 + L1MB7 LINE L1 6134 6184 0 713 135 18 0 chr2 25638792 25638903 -225048951 + AluSq/x SINE Alu 1 113 -200 22 70 0 0 chr2 25641505 25641548 -225046306 + AT_rich Low_complexity Low_complexity 1 43 0 192 77 0 0 chr2 25641780 25641806 -225046048 + (CA)n Simple_repeat Simple_repeat 1 26 0 2645 137 72 14 chr2 25642611 25643128 -225044726 - L1MB2 LINE L1 -2 6169 5623 204 265 73 0 chr2 25643590 25643658 -225044196 - L3 LINE CR1 -297 1280 1208 216 0 0 0 chr2 25644069 25644093 -225043761 + (A)n Simple_repeat Simple_repeat 1 24 0 1365 172 73 40 chr2 25644135 25644437 -225043417 - AluJo SINE Alu 0 312 1 25 31 0 0 chr2 25644444 25644476 -225043378 + AT_rich Low_complexity Low_complexity 1 32 0 2219 101 3 10 chr2 25645529 25645837 -225042017 + AluSp SINE Alu 1 306 -7 2244 115 0 3 chr2 25645849 25646154 -225041700 + AluSg SINE Alu 1 304 -6 181 284 95 40 chr2 25646182 25646256 -225041598 + MIR SINE MIR 16 93 -115 675 245 7 0 chr2 25646408 25646559 -225041295 + AluJo SINE Alu 123 274 -38 282 56 0 0 chr2 25646583 25646619 -225041235 + (CA)n Simple_repeat Simple_repeat 2 37 0 2720 213 124 72 chr2 25647071 25647655 -225040199 + L1MDb LINE L1 311 863 -5543 2105 123 20 0 chr2 25647655 25647948 -225039906 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 25647948 25648343 -225039511 + L1MDb LINE L1 863 1236 -5170 1932 128 60 0 chr2 25648343 25648625 -225039229 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 25648625 25648684 -225039170 + L1MDb LINE L1 1236 1291 -5115 1776 167 28 3 chr2 25648684 25648972 -225038882 + AluJb SINE Alu 1 295 -17 2720 213 124 72 chr2 25648972 25649923 -225037931 + L1MDb LINE L1 1291 2508 -3898 2425 214 80 21 chr2 25649923 25650587 -225037267 + L1MD2 LINE L1 5575 6277 -82 278 163 0 0 chr2 25650651 25650700 -225037154 + MLT1K LTR MaLR 3 51 -537 2211 129 0 3 chr2 25650718 25651013 -225036841 + AluSx SINE Alu 1 294 -18 2166 131 0 0 chr2 25651376 25651688 -225036166 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 25651737 25651764 -225036090 + AT_rich Low_complexity Low_complexity 1 27 0 2181 112 0 7 chr2 25652134 25652430 -225035424 - AluSx SINE Alu -18 294 1 530 146 37 0 chr2 25653445 25653527 -225034327 + FLAM SINE Alu 43 127 -16 22 0 0 0 chr2 25654844 25654866 -225032988 + AT_rich Low_complexity Low_complexity 1 22 0 1549 154 8 0 chr2 25654875 25655109 -225032745 + AluJb SINE Alu 1 236 -76 1470 136 125 52 chr2 25655140 25655427 -225032427 + AluJb SINE Alu 1 308 -4 320 196 0 56 chr2 25655640 25655747 -225032107 + LTR41 LTR ERVL 662 762 -11 997 68 0 23 chr2 25656921 25657054 -225030800 - AluJb SINE Alu -7 305 176 860 183 0 0 chr2 25657195 25657337 -225030517 - FLAM_C SINE Alu -1 142 1 22 70 0 0 chr2 25657481 25657524 -225030330 + AT_rich Low_complexity Low_complexity 1 43 0 2303 157 37 5 chr2 25657671 25658104 -225029750 - L1MB4 LINE L1 -7 6173 5727 1670 159 21 14 chr2 25658322 25658612 -225029242 + AluJb SINE Alu 1 292 -20 2328 102 0 16 chr2 25658872 25659008 -225028846 + AluSq SINE Alu 2 139 -174 2160 69 0 0 chr2 25659008 25659269 -225028585 + AluY SINE Alu 37 297 -14 2328 102 0 16 chr2 25659269 25659447 -225028407 + AluSq SINE Alu 139 311 -2 575 100 0 0 chr2 25659879 25659959 -225027895 - AluS SINE Alu -233 80 1 204 67 0 0 chr2 25660002 25660032 -225027822 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 333 118 0 0 chr2 25660033 25660049 -225027805 + (TG)n Simple_repeat Simple_repeat 1 67 0 333 118 0 0 chr2 25660049 25660100 -225027754 + (TG)n Simple_repeat Simple_repeat 2 52 0 2091 114 0 49 chr2 25660119 25660325 -225027529 - AluSx SINE Alu -3 309 123 2294 82 0 10 chr2 25660325 25660628 -225027226 + AluY SINE Alu 1 300 -11 2091 114 0 49 chr2 25660628 25660746 -225027108 - AluSx SINE Alu -189 123 1 949 187 12 0 chr2 25660982 25661148 -225026706 + FAM SINE Alu 1 49 0 338 285 30 22 chr2 25661245 25661413 -225026441 - MER20B DNA MER1_type -4 215 43 2052 137 16 0 chr2 25661606 25661912 -225025942 + AluSx SINE Alu 1 311 -1 1421 211 39 0 chr2 25661957 25662242 -225025612 - AluJo SINE Alu -16 296 1 25 31 0 0 chr2 25662749 25662781 -225025073 + AT_rich Low_complexity Low_complexity 1 32 0 29 78 0 0 chr2 25662881 25662945 -225024909 + AT_rich Low_complexity Low_complexity 1 64 0 239 292 41 59 chr2 25663181 25663464 -225024390 + L1MDa LINE L1 21 576 -5954 2293 112 0 7 chr2 25663669 25663972 -225023882 + AluSx SINE Alu 1 301 -11 928 169 39 0 chr2 25663972 25664126 -225023728 + AluSg/x SINE Alu 132 291 -19 363 273 72 24 chr2 25664127 25664336 -225023518 + L1MDa LINE L1 1070 1288 -5255 194 224 90 30 chr2 25664407 25664474 -225023380 - MIR SINE MIR -158 104 34 252 234 16 16 chr2 25664833 25664897 -225022957 + L2 LINE L2 2310 2373 -941 504 238 104 0 chr2 25665053 25665217 -225022637 + L1MC5 LINE L1 7720 7900 -61 2073 91 0 7 chr2 25665646 25665960 -225021894 + AluY SINE Alu 1 312 0 1994 128 3 0 chr2 25666069 25666365 -225021489 + AluSq SINE Alu 1 297 -16 1628 154 0 47 chr2 25666461 25666779 -225021075 + AluSx SINE Alu 1 303 -9 1515 141 0 4 chr2 25666780 25667014 -225020840 - AluJb SINE Alu -12 300 68 808 161 8 0 chr2 25667014 25667144 -225020710 - AluJo/FLAM SINE Alu -181 131 1 1759 179 113 136 chr2 25667266 25668170 -225019684 - L1MC5 LINE L1 -30 7931 7051 2004 113 26 22 chr2 25668170 25668481 -225019373 + AluSq SINE Alu 1 312 -1 1759 179 113 136 chr2 25668481 25668569 -225019285 - L1MC5 LINE L1 -910 7051 6962 1303 143 0 31 chr2 25668996 25669219 -225018635 + AluSg/x SINE Alu 81 296 -14 412 336 125 19 chr2 25669894 25670310 -225017544 - L2 LINE L2 -1110 2204 1745 265 281 210 27 chr2 25670655 25670879 -225016975 + L2 LINE L2 1946 2210 -1104 993 111 0 76 chr2 25670941 25671113 -225016741 - FRAM SINE Alu -17 159 1 799 235 36 25 chr2 25671580 25671776 -225016078 - MIR SINE MIR -2 260 63 291 232 63 42 chr2 25671779 25671874 -225015980 + HERVL LTR ERVL 4203 4299 -1355 331 322 101 0 chr2 25671993 25672151 -225015703 + HERVL LTR ERVL 5177 5343 -142 978 106 0 7 chr2 25672664 25672835 -225015019 - AluSg/x SINE Alu 0 308 139 2177 99 3 7 chr2 25672838 25673140 -225014714 - AluSx SINE Alu -11 301 1 189 0 0 0 chr2 25673145 25673166 -225014688 + (T)n Simple_repeat Simple_repeat 1 21 0 423 292 82 31 chr2 25673885 25674151 -225013703 - MLT1J LTR MaLR -119 331 64 856 271 43 60 chr2 25674287 25674637 -225013217 + L2 LINE L2 2876 3219 -94 644 152 0 0 chr2 25674638 25674763 -225013091 - AluSg/x SINE Alu 0 316 192 514 152 0 54 chr2 25674766 25674858 -225012996 + L2 LINE L2 3212 3298 -15 21 36 0 0 chr2 25675005 25675033 -225012821 + AT_rich Low_complexity Low_complexity 1 28 0 2058 106 7 7 chr2 25675229 25675532 -225012322 + AluSc SINE Alu 5 307 -2 189 171 0 0 chr2 25675536 25675571 -225012283 + A-rich Low_complexity Low_complexity 1 35 0 618 126 0 0 chr2 25675593 25675680 -225012174 + FRAM SINE Alu 75 161 -15 731 193 31 68 chr2 25675680 25675768 -225012086 + L2 LINE L2 3129 3219 -94 1828 139 20 14 chr2 25675768 25676063 -225011791 - AluSx SINE Alu -15 297 1 731 193 31 68 chr2 25676063 25676166 -225011688 + L2 LINE L2 3219 3313 0 443 256 74 78 chr2 25676186 25676455 -225011399 - MLT1J LTR MaLR -241 270 3 1992 101 42 3 chr2 25676500 25676788 -225011066 - AluSq SINE Alu -14 299 1 2138 114 0 9 chr2 25676850 25677165 -225010689 + AluSx SINE Alu 1 312 0 793 165 0 8 chr2 25677218 25677351 -225010503 - FLAM_A SINE Alu -1 132 1 2133 105 0 10 chr2 25678185 25678498 -225009356 - AluSx SINE Alu -2 310 1 207 326 184 31 chr2 25678660 25678856 -225008998 + MIR SINE MIR 3 228 -34 2062 112 10 0 chr2 25679170 25679464 -225008390 - AluSq SINE Alu -16 297 1 2142 113 0 0 chr2 25679821 25680121 -225007733 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 25680381 25680405 -225007449 + AT_rich Low_complexity Low_complexity 1 24 0 234 128 0 0 chr2 25680661 25680700 -225007154 + (CA)n Simple_repeat Simple_repeat 2 40 0 204 179 0 0 chr2 25682497 25682536 -225005318 + (CA)n Simple_repeat Simple_repeat 1 39 0 2192 93 3 7 chr2 25683254 25683554 -225004300 - AluSx SINE Alu -13 299 1 484 275 67 7 chr2 25683554 25683703 -225004151 + MIR SINE MIR 91 248 -14 1994 128 10 3 chr2 25683864 25684169 -225003685 - AluSx SINE Alu -3 309 3 1564 122 106 0 chr2 25684573 25684819 -225003035 + AluSx SINE Alu 1 272 -40 200 227 0 15 chr2 25684819 25684875 -225002979 + GA-rich Low_complexity Low_complexity 12 68 0 246 193 0 35 chr2 25685407 25685464 -225002390 + LTR54 LTR ERV1 402 456 -54 1807 147 17 0 chr2 25685468 25685760 -225002094 - AluSx SINE Alu -15 297 1 2024 111 7 17 chr2 25685775 25686072 -225001782 - AluSx SINE Alu -18 294 1 222 223 69 56 chr2 25686102 25686181 -225001673 + MIR SINE MIR 51 130 -78 417 248 18 9 chr2 25686825 25686938 -225000916 - MIR SINE MIR -129 133 20 498 254 176 8 chr2 25687032 25687276 -225000578 + L1ME LINE L1 5450 5734 -436 491 211 66 26 chr2 25687331 25687483 -225000371 - L1ME4a LINE L1 -17 6104 5947 850 157 0 0 chr2 25687500 25687634 -225000220 + AluJo SINE Alu 1 134 -178 1949 95 0 41 chr2 25687722 25688045 -224999809 - AluSc SINE Alu 0 311 1 454 210 76 112 chr2 25688059 25688179 -224999675 - L1ME4a LINE L1 -303 5818 5708 1659 176 17 0 chr2 25688179 25688469 -224999385 + AluJo SINE Alu 1 295 -17 454 210 76 112 chr2 25688469 25688572 -224999282 - L1ME4a LINE L1 -413 5708 5603 2161 119 0 0 chr2 25688576 25688879 -224998975 - AluSx SINE Alu -9 303 1 860 209 0 28 chr2 25688885 25689062 -224998792 - FAM SINE Alu -3 172 1 4319 136 50 79 chr2 25689073 25689238 -224998616 - L1MB7 LINE L1 0 6184 6016 2030 121 3 7 chr2 25689238 25689544 -224998310 - AluSx SINE Alu -7 305 1 4319 136 50 79 chr2 25689544 25690148 -224997706 - L1MB7 LINE L1 -168 6016 5442 1932 141 0 16 chr2 25690148 25690452 -224997402 - AluJb SINE Alu -13 299 1 4319 136 50 79 chr2 25690452 25690568 -224997286 - L1MB7 LINE L1 -742 5442 5324 1873 132 3 36 chr2 25690568 25690872 -224996982 - AluSx SINE Alu -18 294 1 327 259 12 0 chr2 25690872 25690957 -224996897 - L1MB7 LINE L1 -1321 4825 4740 2196 92 0 0 chr2 25690957 25691290 -224996564 - AluSx SINE Alu 0 333 1 394 262 59 0 chr2 25691298 25691436 -224996418 + L1MC4 LINE L1 1969 6988 -1334 697 226 0 0 chr2 25691466 25691599 -224996255 + FLAM_C SINE Alu 1 133 0 7195 102 181 86 chr2 25691619 25693168 -224994686 - pTR5 LTR ERV1 0 2438 743 782 176 23 0 chr2 25693168 25693299 -224994555 + AluJb SINE Alu 147 280 -32 189 0 0 0 chr2 25693301 25693322 -224994532 + (TAA)n Simple_repeat Simple_repeat 2 22 0 27 73 0 0 chr2 25693340 25693395 -224994459 + AT_rich Low_complexity Low_complexity 1 55 0 2051 107 14 0 chr2 25693474 25693764 -224994090 + AluSq SINE Alu 1 294 -19 1683 85 71 57 chr2 25693770 25693880 -224993974 + AluSx SINE Alu 13 120 -192 2139 88 0 3 chr2 25693880 25694187 -224993667 + AluSx SINE Alu 1 306 0 1683 85 71 57 chr2 25694187 25694356 -224993498 + AluSx SINE Alu 120 297 -15 277 99 0 28 chr2 25694523 25694770 -224993084 + AluJb SINE Alu 1 303 0 216 0 0 0 chr2 25695782 25695806 -224992048 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 427 178 36 234 chr2 25695883 25696105 -224991749 + L2 LINE L2 2540 2804 -510 1911 129 10 3 chr2 25696105 25696414 -224991440 + AluSx SINE Alu 1 311 -1 1821 149 0 7 chr2 25696419 25696720 -224991134 + AluJo SINE Alu 13 311 -1 427 178 36 234 chr2 25696720 25696795 -224991059 + L2 LINE L2 2695 2783 -531 7709 21 8 291 chr2 25696900 25698762 -224989092 + SVA Other Other 62 1407 0 202 244 24 0 chr2 25698762 25698803 -224989051 + L2 LINE L2 2773 2814 -500 1147 130 5 65 chr2 25698806 25699021 -224988833 - AluJo SINE Alu -4 308 107 615 107 0 0 chr2 25699031 25699115 -224988739 + AluSp/q SINE Alu 215 298 -15 * 665 172 9 9 chr2 25699110 25699226 -224988628 - AluJo SINE Alu -195 117 2 1161 128 12 0 chr2 25699279 25699451 -224988403 + AluSx SINE Alu 1 174 -138 985 129 80 54 chr2 25699706 25699789 -224988065 - AluSx SINE Alu -82 230 151 1859 103 21 4 chr2 25699789 25700070 -224987784 - AluSx SINE Alu -22 290 5 985 129 80 54 chr2 25700070 25700210 -224987644 - AluSx SINE Alu -161 151 1 2070 108 0 0 chr2 25700230 25700507 -224987347 - AluSx SINE Alu -35 277 1 503 256 64 29 chr2 25700520 25700692 -224987162 - MLT1H LTR MaLR -249 300 123 449 299 6 92 chr2 25700873 25700924 -224986930 + LTR16C LTR ERVL 80 134 -357 1850 122 38 0 chr2 25700924 25701211 -224986643 - AluSp SINE Alu -15 298 1 449 299 6 92 chr2 25701211 25701333 -224986521 + LTR16C LTR ERVL 134 238 -253 1951 124 28 0 chr2 25701335 25701625 -224986229 - AluSg SINE Alu -12 298 1 576 154 48 2 chr2 25701628 25701957 -224985897 + L1MC2 LINE L1 6137 6449 -1309 463 90 26 0 chr2 25701957 25702035 -224985819 + (TA)n Simple_repeat Simple_repeat 1 80 0 576 154 48 2 chr2 25702035 25702049 -224985805 + L1MC2 LINE L1 6449 6461 -1297 558 217 83 0 chr2 25702049 25702169 -224985685 - FLAM_A SINE Alu -3 130 1 576 154 48 2 chr2 25702169 25702188 -224985666 + L1MC2 LINE L1 6461 7758 0 774 248 78 24 chr2 25702201 25702493 -224985361 + MLT1G LTR MaLR 40 325 -270 327 146 0 0 chr2 25702827 25702875 -224984979 + Alu SINE Alu 1 48 -254 325 115 0 82 chr2 25702872 25702917 -224984937 + MLT1A1 LTR MaLR 255 295 -70 * 2242 100 7 0 chr2 25702917 25703226 -224984628 - AluSp SINE Alu -2 311 1 325 115 0 82 chr2 25703226 25703241 -224984613 + MLT1A1 LTR MaLR 295 310 -55 252 86 0 0 chr2 25703241 25703276 -224984578 + (CAT)n Simple_repeat Simple_repeat 2 36 0 849 150 94 22 chr2 25703278 25703458 -224984396 - AluJb SINE Alu -27 285 93 451 130 0 26 chr2 25703468 25703545 -224984309 + MLT1A1 LTR MaLR 291 365 0 2127 110 3 3 chr2 25703992 25704292 -224983562 + AluSg SINE Alu 1 300 -10 2027 119 37 0 chr2 25704331 25704626 -224983228 + AluSx SINE Alu 1 306 -6 227 189 19 0 chr2 25704839 25704892 -224982962 + (TA)n Simple_repeat Simple_repeat 1 54 0 1846 117 39 0 chr2 25704892 25705173 -224982681 - AluSx SINE Alu -20 292 1 804 158 21 68 chr2 25705174 25705408 -224982446 - L1MC5 LINE L1 -173 7788 7566 479 333 102 30 chr2 25705426 25705759 -224982095 + L2 LINE L2 2880 3236 -36 700 152 6 116 chr2 25706318 25706350 -224981504 + FAM SINE Alu 4 38 -283 2136 113 0 0 chr2 25706350 25706651 -224981203 - AluSx SINE Alu -11 301 1 700 152 6 116 chr2 25706651 25706782 -224981072 + FAM SINE Alu 38 149 -36 546 221 129 150 chr2 25706884 25707026 -224980828 - L2 LINE L2 -1 3312 3169 1780 195 41 31 chr2 25707026 25707416 -224980438 + MSTD LTR MaLR 1 394 -2 1896 113 13 17 chr2 25707416 25707540 -224980314 + AluSg SINE Alu 12 135 -175 2122 84 3 20 chr2 25707540 25707837 -224980017 + AluY SINE Alu 1 292 -19 1896 113 13 17 chr2 25707837 25708012 -224979842 + AluSg SINE Alu 135 310 0 546 221 129 150 chr2 25708012 25708032 -224979822 - L2 LINE L2 -143 3170 3151 944 230 5 0 chr2 25708032 25708219 -224979635 - MER5A DNA MER1_type 0 189 2 546 221 129 150 chr2 25708219 25708434 -224979420 - L2 LINE L2 -162 3151 2941 2233 119 0 0 chr2 25708434 25708745 -224979109 + AluSx SINE Alu 1 311 -1 1967 115 0 10 chr2 25708752 25709040 -224978814 + AluSg SINE Alu 1 285 -25 1411 223 101 47 chr2 25709145 25709623 -224978231 + L1MC4a LINE L1 7178 8008 -34 2163 79 7 0 chr2 25709623 25709926 -224977928 - AluSg SINE Alu 0 305 1 1411 223 101 47 chr2 25709926 25709961 -224977893 + L1MC4a LINE L1 8008 8040 -2 2035 138 0 0 chr2 25709966 25710277 -224977577 + AluSx SINE Alu 1 311 -1 279 293 30 10 chr2 25710331 25710430 -224977424 + MIR3 SINE MIR 54 154 -54 1734 149 18 0 chr2 25710456 25710731 -224977123 + AluJo SINE Alu 7 286 -26 279 0 0 0 chr2 25710740 25710771 -224977083 + (CAT)n Simple_repeat Simple_repeat 2 32 0 1462 114 71 36 chr2 25711061 25711341 -224976513 + AluSq SINE Alu 18 307 -6 1445 189 0 0 chr2 25711455 25711714 -224976140 + AluJb SINE Alu 47 305 -7 21 0 0 0 chr2 25712009 25712030 -224975824 + AT_rich Low_complexity Low_complexity 1 21 0 532 207 0 0 chr2 25712032 25712119 -224975735 - AluJ/FLAM SINE Alu -221 91 5 2111 94 17 0 chr2 25712131 25712429 -224975425 - AluSx SINE Alu -9 303 1 1888 153 3 7 chr2 25712702 25713010 -224974844 + AluJo SINE Alu 1 307 -5 969 176 0 0 chr2 25713085 25713250 -224974604 - FAM SINE Alu -10 175 11 240 35 0 0 chr2 25713261 25713290 -224974564 + (A)n Simple_repeat Simple_repeat 1 29 0 1030 156 6 17 chr2 25713577 25713756 -224974098 + L1MB2 LINE L1 5949 6125 -46 216 67 0 0 chr2 25713761 25713791 -224974063 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2090 92 3 3 chr2 25713794 25714076 -224973778 - AluSp SINE Alu -31 282 1 1612 104 4 13 chr2 25714148 25714379 -224973475 + AluSg SINE Alu 4 232 -78 2134 86 3 7 chr2 25714479 25714770 -224973084 - AluSq SINE Alu -23 290 1 726 206 0 8 chr2 25714770 25714896 -224972958 - FLAM_A SINE Alu -8 125 1 23 33 0 0 chr2 25714933 25714963 -224972891 + AT_rich Low_complexity Low_complexity 1 30 0 251 233 0 17 chr2 25715064 25715124 -224972730 + L1ME LINE L1 5505 5563 -558 245 319 60 0 chr2 25715208 25715324 -224972530 + L1ME LINE L1 3 125 -5945 * 2859 225 50 17 chr2 25715310 25715560 -224972294 + L1M4 LINE L1 2674 2914 -3232 756 177 15 0 chr2 25715560 25715690 -224972164 + FLAM_C SINE Alu 2 133 0 2224 87 37 0 chr2 25715698 25715996 -224971858 + AluSp SINE Alu 4 312 -1 2859 225 50 17 chr2 25715996 25716089 -224971765 + L1M4 LINE L1 2920 3008 -3138 2052 114 17 0 chr2 25716089 25716379 -224971475 + AluSg SINE Alu 1 295 -15 2071 131 7 7 chr2 25716386 25716691 -224971163 + AluJb SINE Alu 2 306 -6 2859 225 50 17 chr2 25716691 25717248 -224970606 + L1M4 LINE L1 3013 3622 -2524 382 190 63 5 chr2 25717253 25717376 -224970478 + Tigger5 DNA MER2_type 7 194 -2129 * 416 228 13 0 chr2 25717373 25717452 -224970402 + Tigger5 DNA MER2_type 2244 2323 0 379 153 12 24 chr2 25717484 25717569 -224970285 + L1M4 LINE L1 3685 3768 -2378 1916 128 3 32 chr2 25718249 25718562 -224969292 - AluSx SINE Alu -8 304 1 2224 101 0 7 chr2 25718704 25719001 -224968853 + AluSc SINE Alu 1 295 -14 2331 100 0 3 chr2 25719067 25719378 -224968476 + AluY SINE Alu 1 310 -1 2083 131 0 0 chr2 25719380 25719696 -224968158 + AluSx SINE Alu 1 316 0 2171 97 35 3 chr2 25720490 25720779 -224967075 - AluSq SINE Alu -15 298 1 949 162 87 140 chr2 25721091 25721224 -224966630 + MER44D DNA MER2_type 1 140 -2351 2067 121 0 48 chr2 25721224 25721389 -224966465 - AluSx SINE Alu -14 298 153 2334 112 0 3 chr2 25721389 25721702 -224966152 - AluSp SINE Alu -1 312 1 2067 121 0 48 chr2 25721702 25721849 -224966005 - AluSx SINE Alu -159 153 1 949 162 87 140 chr2 25721849 25722039 -224965815 + MER44D DNA MER2_type 140 339 -2152 2345 109 0 3 chr2 25722039 25722352 -224965502 + AluSp SINE Alu 2 313 0 949 162 87 140 chr2 25722352 25722385 -224965469 + MER44D DNA MER2_type 339 609 0 2023 116 35 3 chr2 25722512 25722796 -224965058 - AluSx SINE Alu -19 293 1 2229 113 7 0 chr2 25722861 25723162 -224964692 - AluSc SINE Alu -6 303 1 1000 95 7 15 chr2 25723164 25723301 -224964553 - AluSq/x SINE Alu -176 136 1 442 241 6 100 chr2 25723329 25723412 -224964442 + L1MB7 LINE L1 4672 4734 -1412 2308 92 0 0 chr2 25723412 25723744 -224964110 + AluSx SINE Alu 2 333 0 442 241 6 100 chr2 25723744 25723829 -224964025 + L1MB7 LINE L1 4734 4825 -1321 1997 132 3 36 chr2 25723829 25724133 -224963721 + AluSx SINE Alu 1 294 -18 4358 136 50 79 chr2 25724133 25724249 -224963605 + L1MB7 LINE L1 5324 5442 -742 2055 141 0 16 chr2 25724249 25724553 -224963301 + AluJb SINE Alu 1 299 -13 4358 136 50 79 chr2 25724553 25725157 -224962697 + L1MB7 LINE L1 5442 6016 -168 2151 121 3 7 chr2 25725157 25725463 -224962391 + AluSx SINE Alu 1 305 -7 4358 136 50 79 chr2 25725463 25725628 -224962226 + L1MB7 LINE L1 6016 6184 0 851 209 0 28 chr2 25725639 25725816 -224962038 + FAM SINE Alu 1 172 -3 2288 119 0 0 chr2 25725822 25726125 -224961729 + AluSx SINE Alu 1 303 -9 467 210 76 112 chr2 25726129 25726232 -224961622 + L1ME4a LINE L1 5603 5708 -413 1773 176 17 0 chr2 25726232 25726522 -224961332 - AluJo SINE Alu -17 295 1 467 210 76 112 chr2 25726522 25726642 -224961212 + L1ME4a LINE L1 5708 5818 -303 2074 95 0 41 chr2 25726656 25726979 -224960875 + AluSc SINE Alu 1 311 0 903 157 0 0 chr2 25727067 25727201 -224960653 - AluJo SINE Alu -178 134 1 504 211 66 26 chr2 25727218 25727370 -224960484 + L1ME4a LINE L1 5947 6104 -17 502 254 176 8 chr2 25727425 25727669 -224960185 - L1ME LINE L1 -436 5734 5450 362 250 18 9 chr2 25727764 25727876 -224959978 + MIR SINE MIR 21 133 -129 214 228 0 70 chr2 25728520 25728577 -224959277 - MIR SINE MIR -78 130 78 2151 111 7 17 chr2 25728629 25728926 -224958928 + AluSx SINE Alu 1 294 -18 1931 147 17 0 chr2 25728941 25729233 -224958621 + AluSx SINE Alu 1 297 -15 241 193 0 35 chr2 25729237 25729294 -224958560 - LTR54 LTR ERV1 -54 456 402 200 227 0 15 chr2 25729826 25729882 -224957972 + CT-rich Low_complexity Low_complexity 4 60 -8 1671 122 106 0 chr2 25729882 25730128 -224957726 - AluSx SINE Alu -40 272 1 2119 128 10 3 chr2 25730532 25730837 -224957017 + AluSx SINE Alu 3 309 -3 418 275 67 7 chr2 25730998 25731147 -224956707 - MIR SINE MIR -14 248 91 2266 93 3 13 chr2 25731147 25731448 -224956406 + AluSq SINE Alu 1 298 -15 2041 260 31 40 chr2 25731585 25732232 -224955622 - MER21B LTR ERV1 -125 738 98 519 179 24 0 chr2 25732438 25732522 -224955332 + FRAM/FAM SINE Alu 1 79 -97 204 179 0 0 chr2 25734347 25734386 -224953468 + (CA)n Simple_repeat Simple_repeat 1 39 0 2397 94 0 0 chr2 25735123 25735422 -224952432 - AluSx SINE Alu -13 299 1 677 377 503 0 chr2 25735734 25735867 -224951987 + MER44D DNA MER2_type 1 22 -2465 2067 121 0 48 chr2 25735867 25736032 -224951822 - AluSx SINE Alu -14 298 153 2334 112 0 3 chr2 25736032 25736345 -224951509 - AluSp SINE Alu -1 312 1 2067 121 0 48 chr2 25736345 25736492 -224951362 - AluSx SINE Alu -159 153 1 677 377 503 0 chr2 25736492 25736528 -224951326 + MER44D DNA MER2_type 22 27 -2460 360 89 0 0 chr2 25736528 25736584 -224951270 + L1MA1 LINE L1 6247 6302 0 677 377 503 0 chr2 25736584 25736681 -224951173 + MER44D DNA MER2_type 27 583 -22 2062 97 4 4 chr2 25736682 25736949 -224950905 + AluSp SINE Alu 2 268 -45 335 274 0 0 chr2 25736976 25737071 -224950783 + MIR SINE MIR 167 261 -1 2132 138 0 0 chr2 25737093 25737389 -224950465 - AluSx SINE Alu -16 296 1 761 194 8 0 chr2 25737539 25737668 -224950186 - FLAM_A SINE Alu -3 130 1 2260 118 0 0 chr2 25737967 25738264 -224949590 + AluSg SINE Alu 1 297 -13 195 256 0 0 chr2 25738282 25738325 -224949529 + L2 LINE L2 3172 3214 -58 1170 175 18 22 chr2 25738373 25738596 -224949258 + AluSg/x SINE Alu 83 304 -6 1593 185 0 18 chr2 25738596 25738882 -224948972 - AluJo SINE Alu -31 281 1 222 316 26 0 chr2 25739255 25739331 -224948523 + MIR SINE MIR 47 124 -138 1457 169 0 4 chr2 25739383 25739614 -224948240 - AluSx SINE Alu -82 230 1 509 298 82 76 chr2 25739614 25739725 -224948129 - L2 LINE L2 -12 3301 3192 883 134 0 8 chr2 25739725 25739859 -224947995 - FLAM_C SINE Alu 0 133 1 509 298 82 76 chr2 25739859 25740221 -224947633 - L2 LINE L2 -121 3192 2825 535 275 17 11 chr2 25740226 25740404 -224947450 - L2 LINE L2 -1941 1373 1195 2009 133 9 46 chr2 25740632 25740804 -224947050 - AluSx SINE Alu -1 311 134 414 0 0 0 chr2 25740804 25740850 -224947004 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2185 80 0 60 chr2 25740850 25741150 -224946704 - AluSg SINE Alu -28 282 1 2299 108 0 3 chr2 25741153 25741459 -224946395 - AluSg SINE Alu -5 305 1 2444 39 11 0 chr2 25741465 25741776 -224946078 - AluY SINE Alu 0 314 1 2009 133 9 46 chr2 25741776 25741913 -224945941 - AluSx SINE Alu -184 128 1 1695 169 3 59 chr2 25742010 25742191 -224945663 - AluJo SINE Alu -10 302 145 2195 105 0 0 chr2 25742191 25742477 -224945377 - AluSg SINE Alu -24 286 1 1695 169 3 59 chr2 25742477 25742615 -224945239 - AluJo SINE Alu -167 145 1 2109 130 0 3 chr2 25743312 25743604 -224944250 + AluSx SINE Alu 3 293 -19 650 324 32 0 chr2 25743792 25744011 -224943843 + LTR16C LTR ERVL 1 226 -265 939 225 94 72 chr2 25744028 25744256 -224943598 - MLT1H LTR MaLR -4 545 303 2258 107 3 0 chr2 25744256 25744546 -224943308 - AluSx SINE Alu -21 291 1 939 225 94 72 chr2 25744546 25744731 -224943123 - MLT1H LTR MaLR -246 303 123 446 299 6 92 chr2 25744912 25744963 -224942891 + LTR16C LTR ERVL 80 134 -357 2034 114 35 3 chr2 25744963 25745252 -224942602 - AluSp SINE Alu -15 298 1 446 299 6 92 chr2 25745252 25745374 -224942480 + LTR16C LTR ERVL 134 238 -253 2075 124 28 0 chr2 25745376 25745666 -224942188 - AluSg SINE Alu -12 298 1 1948 151 39 0 chr2 25745669 25746000 -224941854 + L1MC3 LINE L1 7418 7761 -24 308 158 158 0 chr2 25746000 25746076 -224941778 - L1MC4 LINE L1 -1340 6702 6615 554 217 83 0 chr2 25746090 25746210 -224941644 - FLAM_A SINE Alu -3 130 1 765 248 78 24 chr2 25746242 25746534 -224941320 + MLT1G LTR MaLR 40 325 -270 322 146 0 0 chr2 25746868 25746916 -224940938 + Alu SINE Alu 1 48 -255 * 360 89 36 0 chr2 25746914 25746970 -224940884 + MSTD LTR MaLR 284 341 -55 499 310 88 46 chr2 25746997 25747706 -224940148 + L1MEd LINE L1 636 1283 -4848 2453 67 3 0 chr2 25747706 25748006 -224939848 + AluY SINE Alu 1 301 -10 499 310 88 46 chr2 25748006 25748191 -224939663 + L1MEd LINE L1 1283 1459 -4672 2239 120 3 0 chr2 25748697 25749006 -224938848 + AluSx SINE Alu 1 310 -2 458 274 126 36 chr2 25749065 25749485 -224938369 + L1MEd LINE L1 2114 2571 -3558 2324 84 0 20 chr2 25749517 25749816 -224938038 + AluSg SINE Alu 1 293 -17 885 195 81 5 chr2 25749981 25750202 -224937652 - MIR SINE MIR -21 241 4 231 181 23 90 chr2 25750246 25750379 -224937475 + L1MEd LINE L1 2805 2928 -3201 778 105 53 0 chr2 25750642 25750756 -224937098 + MER30 DNA MER1_type 1 120 -110 216 0 0 0 chr2 25750861 25750885 -224936969 + (A)n Simple_repeat Simple_repeat 1 24 0 2292 86 10 3 chr2 25751201 25751504 -224936350 - AluSc SINE Alu -3 306 2 24 32 0 0 chr2 25751790 25751821 -224936033 + AT_rich Low_complexity Low_complexity 1 31 0 1189 102 17 34 chr2 25751826 25751972 -224935882 - AluSg/x SINE Alu -30 280 136 2519 67 3 0 chr2 25751972 25752271 -224935583 - AluSp SINE Alu -12 301 2 1189 102 17 34 chr2 25752271 25752301 -224935553 - AluSg/x SINE Alu -174 136 107 618 189 79 0 chr2 25752399 25752526 -224935328 + FLAM_C SINE Alu 2 138 -5 441 179 36 12 chr2 25753089 25753173 -224934681 - MLT1E1 LTR MaLR -50 604 519 1714 182 3 16 chr2 25753818 25753954 -224933900 + AluJb SINE Alu 1 137 -175 2363 101 0 0 chr2 25753954 25754252 -224933602 + AluSq SINE Alu 1 298 -15 1714 182 3 16 chr2 25754252 25754423 -224933431 + AluJb SINE Alu 137 304 -8 2099 115 20 0 chr2 25754611 25754907 -224932947 + AluSx SINE Alu 1 302 -10 569 198 18 0 chr2 25755011 25755122 -224932732 + AluJo SINE Alu 120 232 -80 1120 156 0 98 chr2 25755246 25755315 -224932539 + AluJb SINE Alu 86 160 -152 2092 86 43 4 chr2 25755315 25755594 -224932260 + AluSc SINE Alu 1 290 -19 1120 156 0 98 chr2 25755594 25755768 -224932086 + AluJb SINE Alu 160 305 -7 261 77 51 0 chr2 25755959 25755998 -224931856 - HAL1 LINE L1 -1940 567 527 1378 81 0 6 chr2 25756660 25756834 -224931020 - AluSp SINE Alu -10 303 131 300 270 109 42 chr2 25757013 25757184 -224930670 + L1M4 LINE L1 2855 3013 -3133 1820 147 46 0 chr2 25757184 25757469 -224930385 + AluJb SINE Alu 1 298 -14 300 270 109 42 chr2 25757469 25757793 -224930061 + L1M4 LINE L1 3013 3383 -2763 1600 52 4 48 chr2 25758007 25758237 -224929617 - L1PB1 LINE L1 0 6151 5932 922 154 87 0 chr2 25758338 25758487 -224929367 + AluSc SINE Alu 124 285 -24 1438 196 0 61 chr2 25759132 25759283 -224928571 + AluJo SINE Alu 1 125 -187 1761 177 0 0 chr2 25759283 25759571 -224928283 + AluJb SINE Alu 8 295 -17 1438 196 0 61 chr2 25759571 25759730 -224928124 + AluJo SINE Alu 125 292 -20 1687 156 23 23 chr2 25759867 25760168 -224927686 + AluJb SINE Alu 1 301 -11 814 218 14 0 chr2 25760391 25760538 -224927316 + FAM SINE Alu 1 149 -36 29 70 0 0 chr2 25760543 25760600 -224927254 + AT_rich Low_complexity Low_complexity 1 57 0 585 151 0 57 chr2 25761475 25761581 -224926273 + FLAM_C SINE Alu 24 123 -20 21 36 0 0 chr2 25761581 25761609 -224926245 + AT_rich Low_complexity Low_complexity 1 28 0 369 219 62 27 chr2 25762021 25762167 -224925687 + L1ME4a LINE L1 5967 6117 -4 361 225 12 0 chr2 25764219 25764299 -224923555 + L2 LINE L2 3186 3266 -6 2314 112 0 6 chr2 25764919 25765232 -224922622 + AluSx SINE Alu 2 312 0 569 171 147 47 chr2 25766503 25766611 -224921243 - LTR16A1 LTR ERVL -19 438 305 1993 147 3 3 chr2 25766611 25766918 -224920936 + AluSx SINE Alu 1 307 -5 569 171 147 47 chr2 25766918 25766979 -224920875 - LTR16A1 LTR ERVL -151 306 252 299 191 181 29 chr2 25767227 25767332 -224920522 - L1ME LINE L1 -295 5826 5706 311 320 10 19 chr2 25767356 25767459 -224920395 + L1MC4a LINE L1 5844 5945 -1863 340 315 0 0 chr2 25767550 25767642 -224920212 + LTR67 LTR ERVL 117 208 -349 238 346 0 19 chr2 25767680 25767784 -224920070 + LTR67 LTR ERVL 371 472 -85 1623 85 0 22 chr2 25767821 25768045 -224919809 - AluSq SINE Alu -94 219 1 23 0 0 0 chr2 25768058 25768081 -224919773 + AT_rich Low_complexity Low_complexity 1 23 0 189 107 0 0 chr2 25768171 25768199 -224919655 + (TG)n Simple_repeat Simple_repeat 2 29 0 1274 289 13 4 chr2 25768217 25768592 -224919262 + LTR16A LTR ERVL 16 440 -10 361 204 108 32 chr2 25768595 25768688 -224919166 + HERV16 LTR ERVL 1985 2084 -2912 413 311 104 5 chr2 25768710 25768903 -224918951 + HERV16 LTR ERVL 2245 2456 -2540 853 276 97 47 chr2 25768916 25769297 -224918557 + HERV16 LTR ERVL 3314 3713 -2051 2268 101 104 94 chr2 25769299 25769473 -224918381 + MSTA LTR MaLR 1 172 -256 2249 84 3 10 chr2 25769473 25769783 -224918071 + AluSx SINE Alu 1 308 -4 1297 62 0 0 chr2 25769791 25769951 -224917903 + L1PA7 LINE L1 5990 6149 -5 2268 101 104 94 chr2 25769951 25770191 -224917663 + MSTA LTR MaLR 178 428 0 1753 305 18 55 chr2 25770202 25770555 -224917299 + HERV16 LTR ERVL 3682 4046 -1718 1561 136 0 71 chr2 25770555 25770652 -224917202 + AluJo SINE Alu 37 139 -173 2269 109 0 0 chr2 25770652 25770955 -224916899 - AluSg SINE Alu -7 303 1 1561 136 0 71 chr2 25770955 25771137 -224916717 + AluJo SINE Alu 139 296 -16 1753 305 18 55 chr2 25771137 25771635 -224916219 + HERV16 LTR ERVL 4046 4533 -1231 2211 84 3 3 chr2 25771635 25771932 -224915922 - AluSq SINE Alu -16 297 1 270 0 0 0 chr2 25771944 25771974 -224915880 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 534 344 39 12 chr2 25772572 25772881 -224914973 + HERV16 LTR ERVL 4683 5074 -690 1735 183 3 0 chr2 25772881 25773192 -224914662 + AluSx SINE Alu 1 312 0 1766 98 37 0 chr2 25773350 25773594 -224914260 + AluSq SINE Alu 1 253 -60 1201 248 150 3 chr2 25773910 25774237 -224913617 + LTR16A LTR ERVL 33 407 -43 420 97 0 0 chr2 25774355 25774417 -224913437 - Alu SINE Alu -11 300 239 242 208 94 0 chr2 25774548 25774601 -224913253 - MIR SINE MIR -157 105 48 2154 86 26 10 chr2 25774605 25774909 -224912945 - AluSx SINE Alu -3 309 1 1732 143 39 26 chr2 25774982 25775289 -224912565 + AluJb SINE Alu 1 311 -1 657 146 89 24 chr2 25775415 25775538 -224912316 + FLAM_C SINE Alu 13 143 0 1540 165 59 0 chr2 25775567 25775839 -224912015 + AluJo SINE Alu 1 288 -24 954 196 0 0 chr2 25775841 25776020 -224911834 + AluJb SINE Alu 131 309 -3 2011 95 0 0 chr2 25776032 25776296 -224911558 + AluSx SINE Alu 1 264 -48 2299 66 7 0 chr2 25776372 25776660 -224911194 - AluSp SINE Alu -18 295 6 1953 95 3 69 chr2 25777517 25777834 -224910020 + AluSp SINE Alu 1 296 -17 1015 172 0 0 chr2 25777995 25778169 -224909685 - AluSg/x SINE Alu -4 308 135 1778 152 7 20 chr2 25778303 25778606 -224909248 - AluJo SINE Alu -13 299 1 2330 84 0 0 chr2 25778804 25779101 -224908753 + AluSq SINE Alu 1 297 -16 270 224 43 86 chr2 25779242 25779358 -224908496 + HUERS-P1 LTR ERV1 1689 1799 -4464 1063 133 11 11 chr2 25779367 25779547 -224908307 + AluSg/x SINE Alu 128 307 -3 630 141 0 10 chr2 25779569 25779668 -224908186 + AluJo/FLAM SINE Alu 9 106 -206 307 211 14 0 chr2 25779668 25779739 -224908115 + AluJ/FRAM SINE Alu 230 301 -1 1924 117 0 11 chr2 25779789 25780112 -224907742 + AluSx SINE Alu 7 326 0 2077 115 3 16 chr2 25780228 25780364 -224907490 + AluSx SINE Alu 1 137 -175 2157 88 7 0 chr2 25780364 25780659 -224907195 + AluSg SINE Alu 1 297 -13 2077 115 3 16 chr2 25780659 25780826 -224907028 + AluSx SINE Alu 137 300 -12 2028 85 4 11 chr2 25780826 25781098 -224906756 + AluSq SINE Alu 1 270 -43 2280 72 7 0 chr2 25781255 25781547 -224906307 + AluY SINE Alu 1 294 -17 725 179 73 0 chr2 25781854 25781977 -224905877 - FRAM SINE Alu -25 151 20 892 168 6 22 chr2 25782023 25782202 -224905652 + AluJb SINE Alu 129 304 -8 1420 153 78 3 chr2 25782228 25782510 -224905344 + AluJo SINE Alu 1 303 -9 746 173 11 17 chr2 25782516 25782695 -224905159 + GA-rich Low_complexity Low_complexity 3 180 0 215 74 0 0 chr2 25782696 25782723 -224905131 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 960 170 299 12 chr2 25782898 25783239 -224904615 + L1MC4 LINE L1 7604 8042 0 1191 148 178 59 chr2 25783247 25783517 -224904337 + AluJb SINE Alu 1 302 0 1933 108 0 4 chr2 25783646 25783914 -224903940 + AluSx SINE Alu 6 272 -40 1508 106 4 38 chr2 25783916 25784151 -224903703 - AluSx SINE Alu -84 228 2 2232 102 0 13 chr2 25784160 25784474 -224903380 - AluSq SINE Alu -3 310 1 195 210 321 12 chr2 25784554 25784635 -224903219 + MER5B DNA MER1_type 1 106 -72 261 180 0 0 chr2 25784847 25784897 -224902957 + A-rich Low_complexity Low_complexity 1 50 0 327 258 175 0 chr2 25785286 25785383 -224902471 + L2 LINE L2 3143 3256 -16 2132 77 3 33 chr2 25785962 25786261 -224901593 + AluY SINE Alu 1 290 -21 30 0 0 0 chr2 25786265 25786295 -224901559 + AT_rich Low_complexity Low_complexity 1 30 0 1341 98 14 115 chr2 25786387 25786468 -224901386 + L1MA1 LINE L1 6035 6123 -179 231 114 0 0 chr2 25786468 25786503 -224901351 + (TG)n Simple_repeat Simple_repeat 2 36 0 1341 98 14 115 chr2 25786503 25786516 -224901338 + L1MA1 LINE L1 6123 6136 -166 2171 89 7 0 chr2 25786516 25786798 -224901056 - AluSq SINE Alu -17 296 13 1341 98 14 115 chr2 25786798 25786939 -224900915 + L1MA1 LINE L1 6136 6240 -62 1943 139 0 0 chr2 25786939 25787234 -224900620 + AluSx SINE Alu 1 295 -17 1341 98 14 115 chr2 25787234 25787283 -224900571 + L1MA1 LINE L1 6240 6292 -10 42 15 0 44 chr2 25787283 25787320 -224900534 + AT_rich Low_complexity Low_complexity 1 38 -27 2315 72 0 0 chr2 25787320 25787612 -224900242 - AluY SINE Alu -19 292 1 2326 75 13 0 chr2 25787612 25787919 -224899935 - AluSx SINE Alu -1 311 1 42 15 0 44 chr2 25787919 25787948 -224899906 + AT_rich Low_complexity Low_complexity 36 65 0 570 257 90 0 chr2 25788583 25788727 -224899127 - MIR3 SINE MIR -7 201 45 386 267 188 33 chr2 25791068 25791266 -224896588 - MIR SINE MIR -10 252 27 263 167 0 21 chr2 25791359 25791407 -224896447 + MER57A LTR ERV1 291 337 -66 294 267 35 0 chr2 25791942 25792028 -224895826 + MER96 DNA MER1_type? 87 175 0 2031 126 0 0 chr2 25792251 25792553 -224895301 + AluSx SINE Alu 1 302 -10 907 81 8 0 chr2 25792747 25792870 -224894984 + AluSp SINE Alu 3 126 -187 299 255 133 58 chr2 25793217 25793253 -224894601 + MIR3 SINE MIR 36 68 -140 2027 124 0 0 chr2 25793253 25793551 -224894303 + AluSq SINE Alu 1 298 -15 299 255 133 58 chr2 25793551 25793675 -224894179 + MIR3 SINE MIR 68 208 0 1282 141 51 63 chr2 25793913 25794223 -224893631 - L1MB2 LINE L1 -23 6148 5869 * 2334 182 65 0 chr2 25794211 25794655 -224893199 - L1MB3 LINE L1 -41 6142 5670 1221 179 4 17 chr2 25794655 25794890 -224892964 - AluJb SINE Alu -9 303 72 188 135 27 0 chr2 25794992 25795029 -224892825 + A-rich Low_complexity Low_complexity 5 42 0 2395 86 0 3 chr2 25795509 25795862 -224891992 + AluSx SINE Alu 1 352 0 1816 236 107 14 chr2 25795862 25796412 -224891442 + L1ME2 LINE L1 5040 5692 -478 2063 177 19 11 chr2 25796412 25796774 -224891080 + MLT1A1 LTR MaLR 1 365 0 1816 236 107 14 chr2 25796774 25797004 -224890850 + L1ME2 LINE L1 5692 5899 -271 1006 79 0 0 chr2 25797020 25797146 -224890708 + AluSq/x SINE Alu 1 126 -187 192 40 0 0 chr2 25797146 25797171 -224890683 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 230 190 65 87 chr2 25797182 25797285 -224890569 + L1ME2 LINE L1 5872 5972 -190 451 276 161 52 chr2 25797850 25798067 -224889787 - L2 LINE L2 -10 3262 3005 2174 104 0 0 chr2 25798067 25798365 -224889489 + AluSg SINE Alu 1 298 -12 451 276 161 52 chr2 25798365 25798433 -224889421 - L2 LINE L2 -267 3005 2946 1803 116 49 0 chr2 25798480 25798764 -224889090 - AluSx SINE Alu -14 298 1 654 278 30 47 chr2 25798934 25799045 -224888809 + MIR SINE MIR 29 140 -122 2410 71 0 0 chr2 25799045 25799342 -224888512 + AluSp SINE Alu 1 297 -16 654 278 30 47 chr2 25799342 25799464 -224888390 + MIR SINE MIR 140 258 -4 2163 100 3 0 chr2 25799577 25799868 -224887986 - AluSq SINE Alu -15 298 7 2134 114 3 0 chr2 25799876 25800184 -224887670 - AluSq SINE Alu -4 309 1 1925 123 10 3 chr2 25800315 25800607 -224887247 + AluSx SINE Alu 1 294 -18 879 173 24 12 chr2 25800822 25800990 -224886864 - AluJo SINE Alu -98 214 45 216 227 0 0 chr2 25800990 25801034 -224886820 + L2 LINE L2 3262 3305 -8 590 316 106 56 chr2 25801103 25801498 -224886356 - L3 LINE CR1 -104 1473 1059 1484 178 43 33 chr2 25801674 25801780 -224886074 + AluJo SINE Alu 1 104 -208 2240 84 0 3 chr2 25801780 25802077 -224885777 + AluY SINE Alu 1 296 -15 1484 178 43 33 chr2 25802077 25802273 -224885581 + AluJo SINE Alu 104 306 -6 747 285 64 47 chr2 25802298 25802670 -224885184 + L1ME LINE L1 5380 5678 -484 2039 114 3 16 chr2 25802792 25803107 -224884747 + AluSx SINE Alu 1 311 -1 289 0 0 0 chr2 25803134 25803166 -224884688 - L1MA1 LINE L1 -58 6244 6213 2306 89 0 0 chr2 25803301 25803603 -224884251 - AluSq SINE Alu -11 302 1 1886 134 14 0 chr2 25803815 25804107 -224883747 + AluSg SINE Alu 1 296 -14 1869 132 0 4 chr2 25804213 25804486 -224883368 - AluSx SINE Alu -40 272 1 25 40 0 20 chr2 25804496 25804515 -224883339 + AT_rich Low_complexity Low_complexity 1 19 -30 2048 107 3 10 chr2 25804515 25804814 -224883040 - AluSq SINE Alu -16 297 1 25 40 0 20 chr2 25804814 25804844 -224883010 + AT_rich Low_complexity Low_complexity 19 49 0 856 132 0 0 chr2 25804896 25805025 -224882829 + FLAM_C SINE Alu 1 129 -14 344 167 0 0 chr2 25805149 25805203 -224882651 - Charlie5 DNA MER1_type -2550 62 9 890 152 0 0 chr2 25805344 25805482 -224882372 - FRAM SINE Alu -39 137 1 1641 163 24 3 chr2 25805547 25805842 -224882012 + AluJo SINE Alu 1 301 -11 354 282 77 17 chr2 25806164 25806281 -224881573 + L2 LINE L2 3189 3312 -1 2178 103 0 10 chr2 25806424 25806735 -224881119 + AluSx SINE Alu 1 308 -4 2202 101 7 0 chr2 25806789 25807096 -224880758 + AluSq SINE Alu 1 309 -4 1888 133 3 36 chr2 25807519 25807821 -224880033 + AluJo SINE Alu 1 292 -20 721 143 0 0 chr2 25807840 25807945 -224879909 + U6 snRNA snRNA 1 105 -2 1640 211 28 11 chr2 25807950 25808310 -224879544 + L1M3 LINE L1 5315 5680 -500 268 146 21 21 chr2 25808310 25808358 -224879496 + Alu SINE Alu 1 48 -254 392 306 116 70 chr2 25808498 25808782 -224879072 + L2 LINE L2 2967 3263 -9 1828 105 0 0 chr2 25808851 25809099 -224878755 - AluSx SINE Alu -64 248 1 223 265 213 52 chr2 25809420 25809482 -224878372 + MER5B DNA MER1_type 1 52 -126 730 182 15 15 chr2 25809482 25809614 -224878240 + FLAM_C SINE Alu 2 133 0 223 265 213 52 chr2 25809614 25809687 -224878167 + MER5B DNA MER1_type 52 158 -20 184 258 136 15 chr2 25809723 25809789 -224878065 - MIR SINE MIR -105 157 84 261 349 110 0 chr2 25809840 25809949 -224877905 + L2 LINE L2 3118 3238 -34 1717 181 10 0 chr2 25810014 25810323 -224877531 + AluJb SINE Alu 1 312 0 1070 119 12 0 chr2 25811163 25811323 -224876531 + AluSg/x SINE Alu 137 298 -14 2258 85 10 0 chr2 25811729 25812036 -224875818 - AluSp SINE Alu -3 310 1 391 41 107 8 chr2 25812101 25812222 -224875632 + (TA)n Simple_repeat Simple_repeat 2 134 0 304 195 51 93 chr2 25812223 25812341 -224875513 - L1MCa LINE L1 -4362 2064 1952 2043 139 0 0 chr2 25812808 25813111 -224874743 + AluSx SINE Alu 1 303 -9 375 169 28 42 chr2 25813113 25813184 -224874670 - L1MCa LINE L1 -4362 2064 1995 525 55 0 0 chr2 25813184 25813257 -224874597 + (GA)n Simple_repeat Simple_repeat 2 74 0 1322 187 4 26 chr2 25813266 25813534 -224874320 - AluJb SINE Alu -50 262 1 300 159 125 45 chr2 25813534 25813622 -224874232 - L1MC5 LINE L1 -414 7547 7453 1934 152 0 0 chr2 25813668 25813965 -224873889 + AluJb SINE Alu 1 297 -15 770 332 50 4 chr2 25813988 25814268 -224873586 + L3 LINE CR1 834 1126 -451 2033 129 0 0 chr2 25814590 25814885 -224872969 + AluSx SINE Alu 1 295 -17 1642 132 110 7 chr2 25814964 25815386 -224872468 + LTR54 LTR ERV1 4 495 -3 2113 117 0 0 chr2 25815544 25815844 -224872010 - AluSc SINE Alu -9 300 1 1557 178 18 11 chr2 25815844 25816130 -224871724 - AluJo SINE Alu -23 289 2 618 274 48 12 chr2 25816160 25816328 -224871526 - MIR SINE MIR -50 212 39 321 307 10 30 chr2 25817339 25817440 -224870414 + MIR SINE MIR 4 102 -160 537 253 27 16 chr2 25817446 25817632 -224870222 - L1MC5 LINE L1 -35 7926 7739 2339 98 3 0 chr2 25817633 25817928 -224869926 - AluSx SINE Alu -12 300 5 2023 154 3 3 chr2 25817951 25818263 -224869591 - AluJb SINE Alu 0 312 1 308 255 123 0 chr2 25818267 25818373 -224869481 + MIR SINE MIR 104 222 -40 1094 103 18 36 chr2 25818408 25818424 -224869430 + AluSg/x SINE Alu 120 135 -181 1850 163 3 7 chr2 25818424 25818713 -224869141 + AluJo SINE Alu 3 290 -22 1094 103 18 36 chr2 25818713 25818896 -224868958 + AluSg/x SINE Alu 135 316 0 547 223 56 72 chr2 25819295 25819546 -224868308 - LTR67 LTR ERVL 0 557 311 1164 120 0 0 chr2 25819645 25819803 -224868051 + AluSg/x SINE Alu 153 310 0 1425 100 0 25 chr2 25819944 25819963 -224867891 - AluSg/x SINE Alu -1 311 293 1162 82 0 6 chr2 25819963 25820133 -224867721 - L1MA1 LINE L1 0 6302 6134 1425 100 0 25 chr2 25820133 25820313 -224867541 - AluSg/x SINE Alu -19 293 117 1083 152 0 0 chr2 25820413 25820564 -224867290 - AluJb SINE Alu -24 288 138 2383 92 3 3 chr2 25820844 25821150 -224866704 - AluSp SINE Alu -7 306 1 2399 68 0 0 chr2 25821479 25821800 -224866054 - AluY SINE Alu 0 321 1 320 59 20 0 chr2 25821804 25821855 -224865999 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 2423 82 0 3 chr2 25822447 25822740 -224865114 - AluSc SINE Alu -17 292 1 1728 179 0 10 chr2 25822742 25823038 -224864816 - AluJb SINE Alu -19 293 1 2199 126 7 0 chr2 25823047 25823348 -224864506 - AluSx SINE Alu -9 303 1 315 257 76 38 chr2 25823720 25823825 -224864029 + MIR3 SINE MIR 57 165 -43 2031 169 0 0 chr2 25823838 25824140 -224863714 + AluJb SINE Alu 5 306 -6 618 158 0 0 chr2 25824149 25824244 -224863610 + AluS SINE Alu 2 96 -216 2025 133 7 3 chr2 25824317 25824610 -224863244 + AluSx SINE Alu 1 294 -18 576 139 97 14 chr2 25824733 25824877 -224862977 - L1MA4 LINE L1 -3 6297 6142 2202 117 0 7 chr2 25824932 25825223 -224862631 - AluSc SINE Alu -20 289 1 712 214 83 0 chr2 25825235 25825403 -224862451 + AluJo SINE Alu 115 296 -16 663 174 16 0 chr2 25825417 25825538 -224862316 - FLAM_A SINE Alu -10 123 1 2269 100 17 0 chr2 25825786 25826075 -224861779 + AluSx SINE Alu 1 294 -18 2294 101 13 0 chr2 25826575 25826882 -224860972 + AluSq SINE Alu 3 313 0 327 104 0 0 chr2 25826925 25826973 -224860881 + (A)n Simple_repeat Simple_repeat 1 48 0 2061 104 11 14 chr2 25829061 25829348 -224858506 - AluSx SINE Alu -25 287 2 952 254 91 21 chr2 25829348 25829734 -224858120 - L1M4 LINE L1 -3371 2775 2363 1858 146 3 61 chr2 25829882 25830210 -224857644 - AluJb SINE Alu -3 309 1 298 320 64 19 chr2 25830675 25830831 -224857023 + MIR SINE MIR 65 227 -35 387 272 37 63 chr2 25831103 25831294 -224856560 - L1ME1 LINE L1 -46 6120 5935 234 0 0 0 chr2 25831306 25831332 -224856522 + (T)n Simple_repeat Simple_repeat 1 26 0 934 85 30 12 chr2 25831434 25831598 -224856256 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2456 81 0 31 chr2 25831606 25832013 -224855841 - AluY SINE Alu 0 397 1 2240 130 0 0 chr2 25832016 25832324 -224855530 - AluSx SINE Alu -4 308 1 749 158 23 17 chr2 25832346 25832523 -224855331 + CT-rich Low_complexity Low_complexity 1 178 0 2086 120 40 0 chr2 25832537 25832836 -224855018 - AluSp SINE Alu -1 312 2 889 175 44 38 chr2 25832842 25833025 -224854829 - AluJo SINE Alu -6 306 123 2176 145 0 0 chr2 25833394 25833697 -224854157 + AluSx SINE Alu 1 303 -9 312 294 0 68 chr2 25834241 25834387 -224853467 - MIR SINE MIR -50 212 77 2149 107 21 3 chr2 25834411 25834701 -224853153 - AluSx SINE Alu -17 295 1 281 281 12 24 chr2 25834882 25834964 -224852890 - L2 LINE L2 -546 2768 2688 259 246 29 0 chr2 25834965 25835034 -224852820 + CT-rich Low_complexity Low_complexity 6 76 0 208 324 73 0 chr2 25835739 25835807 -224852047 + L2 LINE L2 3231 3303 -10 200 35 35 0 chr2 25835811 25835840 -224852014 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 27 29 0 0 chr2 25836871 25836905 -224850949 + AT_rich Low_complexity Low_complexity 1 34 0 2226 122 0 0 chr2 25836954 25837250 -224850604 + AluSq SINE Alu 1 296 -17 2382 89 0 0 chr2 25837251 25837544 -224850310 + AluSc SINE Alu 1 293 -16 321 26 0 0 chr2 25837563 25837601 -224850253 + (TAA)n Simple_repeat Simple_repeat 1 38 0 1453 164 116 40 chr2 25837606 25837881 -224849973 + AluJb SINE Alu 1 296 -16 1608 106 0 14 chr2 25837996 25838213 -224849641 + AluSg SINE Alu 1 214 -96 2295 132 0 0 chr2 25838249 25838559 -224849295 + AluSg SINE Alu 1 310 0 863 150 0 0 chr2 25838610 25838743 -224849111 + FLAM_C SINE Alu 1 133 0 214 362 21 11 chr2 25838900 25838994 -224848860 + MIR SINE MIR 19 113 -149 751 245 70 10 chr2 25838994 25839194 -224848660 - MLT1K LTR MaLR 0 588 377 2380 82 0 26 chr2 25839216 25839519 -224848335 - AluY SINE Alu -16 295 1 2444 99 0 6 chr2 25839522 25839835 -224848019 - AluSq SINE Alu -2 311 1 458 318 161 0 chr2 25839836 25840059 -224847795 - MLT1K LTR MaLR -320 268 10 2168 135 0 0 chr2 25840395 25840691 -224847163 + AluSx SINE Alu 1 296 -16 741 179 0 0 chr2 25840743 25840860 -224846994 + FLAM_C SINE Alu 2 118 -15 381 22 0 0 chr2 25840862 25840908 -224846946 + (TG)n Simple_repeat Simple_repeat 1 46 0 2108 111 4 7 chr2 25840908 25841188 -224846666 - AluSx SINE Alu -33 279 1 695 180 16 0 chr2 25841513 25841635 -224846219 + FLAM_A SINE Alu 1 124 -9 2102 133 0 3 chr2 25841655 25841989 -224845865 + AluSx SINE Alu 1 333 0 367 262 148 0 chr2 25842628 25842750 -224845104 + MER91C DNA MER1_type 1 140 0 2276 216 83 33 chr2 25843028 25843370 -224844484 + L1ME3A LINE L1 5456 5779 -391 2315 100 3 0 chr2 25843370 25843661 -224844193 + AluSq SINE Alu 5 296 -17 2314 97 7 0 chr2 25843662 25843971 -224843883 + AluY SINE Alu 1 311 0 2276 216 83 33 chr2 25843971 25843992 -224843862 + L1ME3A LINE L1 5779 5797 -373 2336 100 3 13 chr2 25843992 25844303 -224843551 + AluSp SINE Alu 1 308 -5 2276 216 83 33 chr2 25844303 25844609 -224843245 + L1ME3A LINE L1 5797 6162 -8 681 232 61 49 chr2 25844603 25844849 -224843005 + L1MEc LINE L1 8 256 -6140 * 427 257 29 68 chr2 25844862 25844887 -224842967 + L1MEc LINE L1 390 414 -5982 1472 164 118 8 chr2 25844887 25845149 -224842705 - AluSg1 SINE Alu -18 291 1 427 257 29 68 chr2 25845149 25845329 -224842525 + L1MEc LINE L1 414 587 -5809 424 241 70 82 chr2 25845585 25845743 -224842111 + L2 LINE L2 3158 3313 0 2276 101 0 31 chr2 25846447 25846764 -224841090 + AluSg SINE Alu 1 307 -3 1376 74 0 0 chr2 25847371 25847533 -224840321 + AluY SINE Alu 1 162 -149 656 290 65 0 chr2 25847831 25848076 -224839778 + AluSx SINE Alu 50 310 -2 1105 165 6 0 chr2 25848222 25848392 -224839462 - FRAM SINE Alu -13 163 1 733 164 138 13 chr2 25849231 25849383 -224838471 - AluJb SINE Alu -16 296 126 2249 114 7 0 chr2 25849867 25850156 -224837698 - AluSx SINE Alu -17 295 5 553 302 33 6 chr2 25850596 25850778 -224837076 - MIR SINE MIR -56 206 20 265 324 63 9 chr2 25851129 25851240 -224836614 + MIR SINE MIR 35 151 -111 1766 155 0 63 chr2 25851279 25851622 -224836232 + AluJb SINE Alu 1 324 0 268 300 33 8 chr2 25852328 25852448 -224835406 - MIR3 SINE MIR -5 203 81 2509 89 0 0 chr2 25852575 25852878 -224834976 - AluSx SINE Alu -9 303 1 198 189 0 0 chr2 25852905 25852942 -224834912 - MIR SINE MIR -87 121 85 701 30 10 30 chr2 25853148 25853249 -224834605 + L1PB1 LINE L1 6053 6151 0 360 250 94 31 chr2 25853262 25853390 -224834464 - HAL1b LINE L1 -2 1346 1238 2131 141 10 0 chr2 25853473 25853770 -224834084 - AluSx SINE Alu -12 300 1 474 286 85 77 chr2 25853935 25854140 -224833714 + MIR SINE MIR 2 211 -51 2342 113 3 0 chr2 25854140 25854450 -224833404 + AluSq SINE Alu 1 311 -2 474 286 85 77 chr2 25854450 25854503 -224833351 + MIR SINE MIR 211 262 0 2114 108 0 49 chr2 25854598 25854745 -224833109 + AluSc SINE Alu 1 154 -155 2566 70 0 0 chr2 25854745 25855046 -224832808 + AluY SINE Alu 1 301 -10 2114 108 0 49 chr2 25855046 25855222 -224832632 + AluSc SINE Alu 154 308 -1 1613 180 0 59 chr2 25855456 25855779 -224832075 - AluJo SINE Alu -6 306 3 292 285 32 8 chr2 25856583 25856706 -224831148 + CT-rich Low_complexity Low_complexity 2 127 0 280 336 100 0 chr2 25856869 25856979 -224830875 - L3 LINE CR1 -25 1552 1432 495 171 0 122 chr2 25856982 25857026 -224830828 - L1MA10 LINE L1 -13 6321 6273 2413 103 0 0 chr2 25857026 25857326 -224830528 + AluSx SINE Alu 1 300 -12 495 171 0 122 chr2 25857326 25857404 -224830450 - L1MA10 LINE L1 -61 6273 6214 409 266 77 14 chr2 25857751 25857811 -224830043 - MIR SINE MIR 0 262 207 2442 87 0 6 chr2 25857811 25858122 -224829732 - AluSc SINE Alu 0 309 1 913 135 0 0 chr2 25858122 25858255 -224829599 - AluJo/FLAM SINE Alu -169 133 1 409 266 77 14 chr2 25858255 25858336 -224829518 - MIR SINE MIR -54 208 111 2371 101 3 0 chr2 25858499 25858795 -224829059 + AluSp SINE Alu 1 297 -16 2044 140 0 3 chr2 25858913 25859205 -224828649 - AluJb SINE Alu -10 302 12 662 299 65 13 chr2 25859302 25859431 -224828423 + MIR SINE MIR 20 141 -121 2414 92 0 0 chr2 25859431 25859734 -224828120 + AluY SINE Alu 1 303 -8 662 299 65 13 chr2 25859734 25859835 -224828019 + MIR SINE MIR 141 262 0 2124 110 10 3 chr2 25860331 25860621 -224827233 + AluSq SINE Alu 1 292 -21 189 239 56 42 chr2 25861903 25861974 -224825880 - MIR SINE MIR -59 149 78 509 247 33 60 chr2 25862004 25862186 -224825668 + MIR SINE MIR 20 196 -66 472 293 42 31 chr2 25863286 25863477 -224824377 - MIR3 SINE MIR -12 196 4 311 268 71 27 chr2 25863593 25863705 -224824149 + MIR SINE MIR 30 146 -62 246 136 0 0 chr2 25864916 25864960 -224822894 + (CCA)n Simple_repeat Simple_repeat 2 45 0 206 269 0 0 chr2 25866276 25866328 -224821526 + (CCG)n Simple_repeat Simple_repeat 1 52 0 208 230 0 27 chr2 25866424 25866498 -224821356 + G-rich Low_complexity Low_complexity 3 74 0 349 256 41 123 chr2 25867364 25867583 -224820271 + MIR SINE MIR 11 211 -51 2217 112 0 0 chr2 25868425 25868719 -224819135 + AluSc SINE Alu 1 294 -15 245 288 0 14 chr2 25868721 25868794 -224819060 + MIR SINE MIR 82 153 -109 953 174 6 6 chr2 25868800 25868961 -224818893 + FRAM SINE Alu 1 157 -19 261 342 47 13 chr2 25869090 25869239 -224818615 + L2 LINE L2 2816 2969 -303 1597 166 10 71 chr2 25869262 25869438 -224818416 - AluJo SINE Alu -23 289 139 2200 87 33 3 chr2 25869438 25869737 -224818117 + AluSg SINE Alu 1 308 -2 1597 166 10 71 chr2 25869737 25869868 -224817986 - AluJo SINE Alu -173 139 1 544 159 11 0 chr2 25869941 25870029 -224817825 + AluJ/FLAM SINE Alu 2 90 -222 188 339 0 0 chr2 25870058 25870117 -224817737 + L2 LINE L2 1851 1909 -1405 784 286 106 83 chr2 25870121 25870590 -224817264 + L2 LINE L2 2172 2629 -643 2015 138 0 52 chr2 25870590 25870915 -224816939 + AluSq SINE Alu 1 308 -5 784 286 106 83 chr2 25870915 25870939 -224816915 + L2 LINE L2 2629 2651 -621 1683 176 13 20 chr2 25870939 25871240 -224816614 + AluJo SINE Alu 1 299 -13 784 286 106 83 chr2 25871240 25871254 -224816600 + L2 LINE L2 2651 2663 -609 2198 114 0 10 chr2 25871254 25871561 -224816293 + AluSx SINE Alu 1 304 -8 784 286 106 83 chr2 25871561 25871602 -224816252 + L2 LINE L2 2663 2702 -570 2301 84 7 3 chr2 25871602 25871899 -224815955 + AluSc SINE Alu 1 298 -11 784 286 106 83 chr2 25871899 25871921 -224815933 + L2 LINE L2 2702 2722 -550 2071 130 0 3 chr2 25871921 25872214 -224815640 - AluSc SINE Alu -17 292 1 784 286 106 83 chr2 25872214 25872724 -224815130 + L2 LINE L2 2722 3271 -1 835 159 0 8 chr2 25872800 25872926 -224814928 + AluJb SINE Alu 2 126 -186 1846 164 3 0 chr2 25873152 25873445 -224814409 + AluJb SINE Alu 3 296 -16 22 80 0 0 chr2 25873462 25873512 -224814342 + AT_rich Low_complexity Low_complexity 1 50 0 2430 76 0 17 chr2 25873534 25873835 -224814019 - AluSp SINE Alu -17 296 1 396 0 0 0 chr2 25873867 25873911 -224813943 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 2089 97 49 3 chr2 25873922 25874210 -224813644 + AluSq SINE Alu 1 301 -12 321 296 64 29 chr2 25874294 25874466 -224813388 - MIR SINE MIR -50 212 35 1896 138 0 3 chr2 25874633 25874936 -224812918 + AluSx SINE Alu 1 302 0 872 181 0 0 chr2 25875113 25875246 -224812608 + FLAM_C SINE Alu 1 133 0 2091 94 44 10 chr2 25875251 25875548 -224812306 + AluSx SINE Alu 1 307 -5 1064 271 61 47 chr2 25876313 25876626 -224811228 + L2 LINE L2 2464 2771 -542 2367 109 0 3 chr2 25876626 25876938 -224810916 + AluSx SINE Alu 1 311 -1 1064 271 61 47 chr2 25876938 25877405 -224810449 + L2 LINE L2 2771 3264 -49 2226 106 0 3 chr2 25877405 25877706 -224810148 + AluSc SINE Alu 1 300 -9 1064 271 61 47 chr2 25877706 25877757 -224810097 + L2 LINE L2 3264 3313 0 1877 158 16 22 chr2 25877792 25878103 -224809751 - AluJb SINE Alu -3 309 1 2365 81 3 0 chr2 25878141 25878439 -224809415 - AluSp SINE Alu -14 299 1 1187 132 6 0 chr2 25879232 25879399 -224808455 - AluSp SINE Alu -27 286 119 2690 33 0 0 chr2 25879554 25879854 -224808000 - AluY SINE Alu -11 300 1 577 151 23 0 chr2 25880065 25880151 -224807703 - FLAM_C SINE Alu -19 124 37 24 32 0 0 chr2 25880165 25880196 -224807658 + AT_rich Low_complexity Low_complexity 1 31 0 2527 79 0 0 chr2 25880358 25880662 -224807192 + AluSp SINE Alu 1 304 -9 810 144 0 8 chr2 25880914 25881032 -224806822 - FLAM_C SINE Alu -25 118 2 4781 176 65 57 chr2 25881205 25881719 -224806135 - L1MD2 LINE L1 0 6359 5851 2118 104 0 21 chr2 25881719 25882037 -224805817 - AluSx SINE Alu 0 312 1 2240 101 0 26 chr2 25882039 25882347 -224805507 - AluSx SINE Alu -12 300 1 4781 176 65 57 chr2 25882347 25882922 -224804932 - L1MD2 LINE L1 -508 5851 5266 1509 168 95 4 chr2 25882922 25883196 -224804658 + AluJb SINE Alu 1 299 -13 4781 176 65 57 chr2 25883196 25883563 -224804291 - L1MD2 LINE L1 -1093 5266 4903 2187 104 37 0 chr2 25883714 25884013 -224803841 - AluSq SINE Alu -3 310 1 1442 234 122 54 chr2 25884145 25884828 -224803026 - HAL1 LINE L1 -443 2064 1336 520 260 53 159 chr2 25884839 25884960 -224802894 - HAL1 LINE L1 -1344 1163 1031 1249 206 126 8 chr2 25884960 25885222 -224802632 - AluJb SINE Alu -9 293 1 1790 145 3 68 chr2 25885227 25885551 -224802303 - AluJb SINE Alu -8 304 2 520 260 53 159 chr2 25885551 25885781 -224802073 - HAL1 LINE L1 -1480 1027 774 2154 90 0 30 chr2 25885781 25886081 -224801773 + AluSc SINE Alu 1 291 -18 2443 70 0 3 chr2 25886091 25886391 -224801463 + AluSg SINE Alu 1 299 -11 520 260 53 159 chr2 25886391 25886416 -224801438 - HAL1 LINE L1 -1742 765 739 1645 178 0 27 chr2 25886416 25886709 -224801145 + AluJo SINE Alu 6 290 -22 520 260 53 159 chr2 25886709 25887147 -224800707 - HAL1 LINE L1 -1768 739 419 2123 94 56 3 chr2 25888031 25888317 -224799537 - AluSg SINE Alu -9 301 1 207 182 0 0 chr2 25888317 25888350 -224799504 + T-rich Low_complexity Low_complexity 5 37 0 2370 91 0 19 chr2 25888351 25888669 -224799185 - AluSx SINE Alu 0 312 1 1057 96 0 0 chr2 25888669 25888805 -224799049 - AluSq/x SINE Alu -176 136 1 406 222 46 9 chr2 25888978 25889086 -224798768 - L1MC4 LINE L1 -3 8039 7928 1069 171 0 0 chr2 25889144 25889308 -224798546 + AluJb SINE Alu 131 294 -18 267 333 32 24 chr2 25889390 25889516 -224798338 - L2 LINE L2 -3 3269 3143 1114 134 6 34 chr2 25889666 25889707 -224798147 - AluSx SINE Alu -138 174 133 2049 128 14 3 chr2 25889707 25890004 -224797850 - AluSx SINE Alu -12 300 1 1114 134 6 34 chr2 25890004 25890141 -224797713 - AluSx SINE Alu -179 133 1 1981 149 17 0 chr2 25890210 25890506 -224797348 - AluJo SINE Alu -11 301 1 2250 114 0 0 chr2 25890506 25890812 -224797042 - AluSc SINE Alu -3 306 1 1663 184 24 3 chr2 25890949 25891237 -224796617 - AluJo SINE Alu -18 294 1 304 295 181 31 chr2 25891375 25891598 -224796256 - L2 LINE L2 -896 2418 2129 1017 157 48 6 chr2 25891598 25891764 -224796090 + FAM SINE Alu 1 173 -2 304 295 181 31 chr2 25891764 25891865 -224795989 - L2 LINE L2 -1185 2129 2045 183 42 0 0 chr2 25891932 25891956 -224795898 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1892 134 0 3 chr2 25891956 25892239 -224795615 - AluSx SINE Alu -30 282 1 207 227 68 0 chr2 25892341 25892385 -224795469 + L2 LINE L2 3216 3262 -10 914 266 87 42 chr2 25892387 25892722 -224795132 + L2 LINE L2 2440 2789 -525 740 213 0 29 chr2 25892736 25892872 -224794982 - FLAM_A SINE Alu -5 137 6 868 275 104 45 chr2 25892886 25893326 -224794528 + L2 LINE L2 2811 3276 -37 186 234 0 21 chr2 25893410 25893457 -224794397 + MIR SINE MIR 210 255 -7 233 211 333 26 chr2 25893592 25893706 -224794148 - L2 LINE L2 0 3313 3165 1039 167 28 3 chr2 25893855 25894056 -224793798 + L1MB2 LINE L1 5551 5758 -413 804 109 67 124 chr2 25894051 25894261 -224793593 + L1MB2 LINE L1 5971 6168 -3 * 582 255 20 108 chr2 25894506 25894586 -224793268 - MIR SINE MIR -15 247 162 2368 63 14 0 chr2 25894586 25894903 -224792951 - AluY SINE Alu 0 311 1 582 255 20 108 chr2 25894903 25895091 -224792763 - MIR SINE MIR -100 162 1 1860 146 0 34 chr2 25895409 25895732 -224792122 - AluJb SINE Alu 0 312 1 1099 233 111 30 chr2 25895735 25896006 -224791848 - AluJo SINE Alu -9 293 1 814 187 193 0 chr2 25896082 25896253 -224791601 - AluJb SINE Alu -22 290 87 21 36 0 0 chr2 25896470 25896498 -224791356 + AT_rich Low_complexity Low_complexity 1 28 0 2036 138 0 10 chr2 25896712 25897036 -224790818 + AluSx SINE Alu 2 312 0 2208 123 0 0 chr2 25897148 25897448 -224790406 + AluSq SINE Alu 1 300 -13 1236 242 184 37 chr2 25897617 25898119 -224789735 - L1MC4 LINE L1 0 8042 7421 1548 135 0 32 chr2 25898119 25898371 -224789483 - AluSx SINE Alu -22 290 47 1236 242 184 37 chr2 25898371 25898520 -224789334 - L1MC4 LINE L1 -621 7421 7295 1443 150 32 80 chr2 25898649 25898962 -224788892 - AluJb SINE Alu -14 298 1 1522 158 0 50 chr2 25899080 25899377 -224788477 + AluJo SINE Alu 1 282 -30 201 147 0 0 chr2 25899521 25899555 -224788299 + (A)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr2 25899662 25899687 -224788167 + AT_rich Low_complexity Low_complexity 1 25 0 366 196 9 89 chr2 25899754 25899866 -224787988 + MER114 LTR ERV 546 648 0 2313 109 106 0 chr2 25900750 25901089 -224786765 - THE1C LTR MaLR 0 375 1 2293 107 3 0 chr2 25901093 25901392 -224786462 - AluSx SINE Alu -7 305 6 930 146 0 0 chr2 25901395 25901532 -224786322 - AluJo SINE Alu -175 137 1 284 291 163 47 chr2 25902389 25902736 -224785118 - L2 LINE L2 -221 3051 2661 338 248 124 0 chr2 25902914 25903019 -224784835 + MIR3 SINE MIR 37 154 -54 2039 100 43 33 chr2 25903714 25904014 -224783840 + AluSg SINE Alu 1 303 -7 2037 137 0 3 chr2 25904029 25904322 -224783532 - AluSx SINE Alu -20 292 1 206 289 186 0 chr2 25904876 25904973 -224782881 - MIR SINE MIR -100 162 48 2502 186 146 19 chr2 25905144 25905721 -224782133 + Charlie1a DNA MER1_type 1 652 -799 2291 101 0 3 chr2 25905721 25906018 -224781836 + AluSx SINE Alu 1 296 -16 873 174 0 13 chr2 25906055 25906204 -224781650 + FRAM SINE Alu 20 166 -10 2606 171 100 106 chr2 25906208 25906452 -224781402 + Charlie1a DNA MER1_type 650 894 -1867 2147 109 3 0 chr2 25906452 25906735 -224781119 + AluSc SINE Alu 1 284 -25 210 37 0 0 chr2 25906742 25906769 -224781085 + (TAA)n Simple_repeat Simple_repeat 3 29 0 2606 171 100 106 chr2 25906769 25907327 -224780527 + Charlie1a DNA MER1_type 900 1455 0 456 288 40 17 chr2 25907818 25907982 -224779872 - LTR33A LTR ERVL -361 185 24 2333 101 0 19 chr2 25908717 25909034 -224778820 - AluSq SINE Alu -2 311 1 676 203 222 24 chr2 25909060 25909267 -224778587 + MIR SINE MIR 8 255 -7 504 252 71 32 chr2 25910413 25910637 -224777217 - MIR SINE MIR -14 248 16 2351 74 30 0 chr2 25910977 25911276 -224776578 + AluSq SINE Alu 1 308 -5 2083 137 0 0 chr2 25912013 25912313 -224775541 + AluY SINE Alu 1 300 -11 2201 221 65 0 chr2 25912333 25912854 -224775000 + L1M4 LINE L1 4310 4864 -1282 321 256 236 20 chr2 25912899 25913153 -224774701 + L1MEc LINE L1 1237 1545 -4851 3108 198 78 74 chr2 25913153 25913223 -224774631 + L1MC4a LINE L1 6240 6308 -1500 1904 158 11 0 chr2 25913223 25913508 -224774346 + AluSx SINE Alu 1 288 -24 3108 198 78 74 chr2 25913508 25913626 -224774228 + L1MC4a LINE L1 6308 6424 -1384 368 70 0 18 chr2 25913626 25913683 -224774171 + (CA)n Simple_repeat Simple_repeat 2 57 0 3108 198 78 74 chr2 25913683 25913975 -224773879 + L1MC4a LINE L1 6424 6713 -1095 2000 137 27 0 chr2 25913975 25914275 -224773579 - AluJo SINE Alu -4 308 1 3108 198 78 74 chr2 25914275 25914757 -224773097 + L1MC4a LINE L1 6713 7208 -600 303 179 0 0 chr2 25914808 25914864 -224772990 + L1MD3 LINE L1 7599 7654 -341 962 147 125 85 chr2 25914872 25915096 -224772758 - AluJo SINE Alu -60 252 20 1950 190 82 74 chr2 25915125 25915247 -224772607 + L1MD3 LINE L1 7405 7524 -471 2452 107 42 20 chr2 25915247 25915601 -224772253 + THE1B LTR MaLR 1 362 -2 1950 190 82 74 chr2 25915601 25916062 -224771792 + L1MD3 LINE L1 7524 7993 -2 1470 226 63 52 chr2 25916094 25916634 -224771220 + L1MEc LINE L1 1531 2076 -4320 1113 169 111 43 chr2 25916630 25916909 -224770945 + L1MEc LINE L1 2357 2654 -3561 * 1850 237 152 30 chr2 25916906 25917678 -224770176 + L1MEc LINE L1 3535 4400 -1815 212 156 0 89 chr2 25917702 25917792 -224770062 + C-rich Low_complexity Low_complexity 5 86 0 978 146 0 7 chr2 25917805 25917956 -224769898 - AluSg/x SINE Alu -38 272 123 1128 145 0 6 chr2 25917959 25918131 -224769723 - AluSx SINE Alu -138 174 4 796 190 42 14 chr2 25918134 25918350 -224769504 + L1MEc LINE L1 4388 4609 -1606 720 274 85 0 chr2 25918352 25918553 -224769301 + L2 LINE L2 2864 3081 -232 258 171 85 49 chr2 25919440 25919522 -224768332 + L1MEc LINE L1 5189 5273 -942 2150 120 3 3 chr2 25919522 25919822 -224768032 + AluSx SINE Alu 1 300 -12 612 144 0 0 chr2 25919841 25919938 -224767916 + MER50 LTR ERV1 508 604 -130 308 219 37 12 chr2 25919948 25920030 -224767824 + L1MEc LINE L1 5262 5345 -870 2340 96 7 7 chr2 25920030 25920333 -224767521 + AluSp SINE Alu 1 303 -10 1597 137 122 11 chr2 25920348 25920610 -224767244 + AluSq SINE Alu 1 291 -22 3384 180 60 62 chr2 25920610 25921454 -224766400 + L1MB5 LINE L1 5323 6165 -9 356 307 200 9 chr2 25921475 25921690 -224766164 + MIR SINE MIR 7 262 0 235 274 0 32 chr2 25921690 25921737 -224766117 + (CTG)n Simple_repeat Simple_repeat 2 48 -13 2198 96 4 0 chr2 25921737 25922017 -224765837 - AluSq SINE Alu -32 281 1 235 274 0 32 chr2 25922017 25922031 -224765823 + (CTG)n Simple_repeat Simple_repeat 48 61 0 404 209 76 9 chr2 25922041 25922146 -224765708 + MIR SINE MIR 125 236 -26 254 292 67 11 chr2 25922226 25922315 -224765539 - MIR SINE MIR -70 138 45 2033 88 0 39 chr2 25922953 25923238 -224764616 - AluSg SINE Alu -36 274 1 2282 105 7 0 chr2 25923458 25923754 -224764100 + AluSx SINE Alu 1 298 -14 390 240 127 75 chr2 25924134 25924401 -224763453 - HAL1 LINE L1 -379 2128 1848 901 268 175 2 chr2 25924461 25924912 -224762942 - HAL1 LINE L1 -789 1718 1190 1786 170 0 23 chr2 25924967 25925273 -224762581 + AluSx SINE Alu 1 299 -13 247 315 18 64 chr2 25925707 25925926 -224761928 - L2 LINE L2 -353 2961 2753 963 251 212 40 chr2 25925928 25926205 -224761649 - L2 LINE L2 -1004 2310 2082 2170 135 0 0 chr2 25926205 25926509 -224761345 + AluSx SINE Alu 1 304 -8 963 251 212 40 chr2 25926509 25926577 -224761277 - L2 LINE L2 -1232 2082 2027 549 0 0 0 chr2 25926577 25926638 -224761216 + (TG)n Simple_repeat Simple_repeat 2 62 0 963 251 212 40 chr2 25926638 25926790 -224761064 - L2 LINE L2 -1287 2027 1726 1745 177 23 16 chr2 25928194 25928504 -224759350 - AluJb SINE Alu 0 312 1 184 79 79 0 chr2 25928534 25928572 -224759282 + (CATTT)n Simple_repeat Simple_repeat 2 42 0 2260 108 0 0 chr2 25928572 25928867 -224758987 - AluSq SINE Alu -18 295 1 2111 121 0 0 chr2 25928885 25929174 -224758680 - AluSx SINE Alu -23 289 1 344 279 48 0 chr2 25929282 25929386 -224758468 - L1MEd LINE L1 -5406 713 605 362 265 103 101 chr2 25929439 25929641 -224758213 - L1MEd LINE L1 -5680 439 239 2450 71 0 0 chr2 25929641 25929935 -224757919 + AluY SINE Alu 1 294 -17 1776 171 7 3 chr2 25929944 25930248 -224757606 + AluJb SINE Alu 1 305 -7 362 265 103 101 chr2 25930248 25930462 -224757392 - L1MEd LINE L1 -5887 232 12 477 104 0 0 chr2 25930702 25930779 -224757075 + (TGGA)n Simple_repeat Simple_repeat 1 77 0 1697 206 105 75 chr2 25931045 25931255 -224756599 - L1M4 LINE L1 -3128 3018 2816 1804 149 27 7 chr2 25931255 25931550 -224756304 + AluJb SINE Alu 1 301 -11 1697 206 105 75 chr2 25931550 25931589 -224756265 - L1M4 LINE L1 -3330 2816 2780 2252 99 0 13 chr2 25931589 25931892 -224755962 - AluSx SINE Alu -12 300 2 1697 206 105 75 chr2 25931892 25932278 -224755576 - L1M4 LINE L1 -3366 2780 2363 1816 146 3 61 chr2 25932394 25932754 -224755100 - AluJb SINE Alu 0 341 1 366 310 65 13 chr2 25933219 25933374 -224754480 + MIR SINE MIR 65 227 -35 771 197 43 64 chr2 25933604 25933837 -224754017 - L1ME1 LINE L1 -5 6161 5934 2483 74 0 7 chr2 25933848 25934157 -224753697 - AluY SINE Alu -4 307 1 450 276 97 25 chr2 25935195 25935391 -224752463 - L2 LINE L2 -96 3217 3008 356 276 95 9 chr2 25935414 25935530 -224752324 - L2 LINE L2 -2 3311 3186 374 258 208 6 chr2 25936483 25936661 -224751193 + L2 LINE L2 3100 3313 0 2538 74 0 0 chr2 25936744 25937053 -224750801 - AluY SINE Alu -2 309 1 246 281 104 21 chr2 25937406 25937502 -224750352 - MIR SINE MIR -138 124 21 206 254 0 79 chr2 25937511 25937574 -224750280 + L2 LINE L2 3215 3272 0 4516 162 46 26 chr2 25937894 25939053 -224748801 - L1MB8 LINE L1 0 6178 4995 2441 70 0 0 chr2 25939053 25939352 -224748502 - AluY SINE Alu -12 299 1 4516 162 46 26 chr2 25939352 25939471 -224748383 - L1MB8 LINE L1 -1183 4995 4880 299 200 53 13 chr2 25939474 25939549 -224748305 - L2 LINE L2 -566 2748 2671 534 287 84 45 chr2 25939580 25939684 -224748170 - L2 LINE L2 -1225 2089 1990 2071 117 50 13 chr2 25939684 25939983 -224747871 + AluSx SINE Alu 1 310 -2 534 287 84 45 chr2 25939983 25940023 -224747831 - L2 LINE L2 -1324 1990 1953 1829 196 20 12 chr2 25940023 25940365 -224747489 + MER7A DNA MER2_type 1 343 -3 534 287 84 45 chr2 25940365 25940529 -224747325 - L2 LINE L2 -1361 1953 1768 2208 206 47 58 chr2 25940535 25940919 -224746935 + L1MD2 LINE L1 4614 5001 -1358 2170 122 3 0 chr2 25940919 25941215 -224746639 + AluSx SINE Alu 1 297 -15 2208 206 47 58 chr2 25941215 25941279 -224746575 + L1MD2 LINE L1 5001 5064 -1295 2315 113 0 0 chr2 25941279 25941581 -224746273 + AluSx SINE Alu 1 302 -10 2208 206 47 58 chr2 25941581 25941829 -224746025 + L1MD2 LINE L1 5064 5313 -1046 2304 97 0 13 chr2 25941829 25942138 -224745716 + AluSq SINE Alu 1 305 -8 2208 206 47 58 chr2 25942138 25943124 -224744730 + L1MD2 LINE L1 5313 6349 -10 2025 128 7 0 chr2 25943195 25943525 -224744329 - AluSx SINE Alu 0 332 1 333 185 93 9 chr2 25943527 25943635 -224744219 - L2 LINE L2 -1604 1710 1594 21 36 0 0 chr2 25943830 25943858 -224743996 + AT_rich Low_complexity Low_complexity 1 28 0 2205 119 0 3 chr2 25944370 25944672 -224743182 + AluSx SINE Alu 1 301 -11 2002 164 0 10 chr2 25945011 25945321 -224742533 - AluSx SINE Alu -5 307 1 26 0 0 0 chr2 25945598 25945624 -224742230 + AT_rich Low_complexity Low_complexity 1 26 0 2435 67 3 7 chr2 25945638 25945937 -224741917 + AluSp SINE Alu 1 298 -15 2048 260 31 40 chr2 25946074 25946721 -224741133 - MER21B LTR ERV1 -125 738 98 1040 177 0 0 chr2 25946935 25947093 -224740761 + FRAM SINE Alu 4 161 -15 2118 121 3 13 chr2 25947114 25947420 -224740434 + AluSq SINE Alu 1 303 -10 4613 209 63 41 chr2 25947440 25947606 -224740248 + L1MB7 LINE L1 3776 3937 -2209 2244 103 0 3 chr2 25947606 25947897 -224739957 + AluSx SINE Alu 1 290 -22 4613 209 63 41 chr2 25947897 25948924 -224738930 + L1MB7 LINE L1 3937 5000 -1146 1925 149 9 44 chr2 25948924 25949240 -224738614 + AluJb SINE Alu 1 305 -7 4613 209 63 41 chr2 25949240 25949291 -224738563 + L1MB7 LINE L1 5000 5048 -1098 267 221 13 26 chr2 25949292 25949369 -224738485 + L1MB7 LINE L1 5129 5204 -942 3402 167 50 31 chr2 25949369 25950086 -224737768 + L1MB7 LINE L1 5454 6184 0 294 150 0 0 chr2 25950120 25950160 -224737694 - MER8 DNA MER2_type 0 239 200 2135 99 0 30 chr2 25950176 25950478 -224737376 - AluSg SINE Alu -13 297 5 24 0 0 0 chr2 25950487 25950511 -224737343 + AT_rich Low_complexity Low_complexity 1 24 0 652 240 0 8 chr2 25950511 25950632 -224737222 - FLAM_A SINE Alu -13 120 1 622 200 38 81 chr2 25950633 25950836 -224737018 - MER8 DNA MER2_type -33 206 12 2552 68 0 0 chr2 25950864 25951171 -224736683 - AluY SINE Alu -4 307 1 424 139 0 38 chr2 25951171 25951250 -224736604 - FLAM_C SINE Alu 0 143 68 2400 63 0 25 chr2 25951648 25951965 -224735889 + AluY SINE Alu 3 311 0 2235 92 3 3 chr2 25952293 25952585 -224735269 - AluSg SINE Alu -18 292 1 543 153 24 0 chr2 25952639 25952724 -224735130 - AluJb SINE Alu -22 290 204 323 220 94 29 chr2 25952939 25953076 -224734778 + MER20 DNA MER1_type 3 219 0 1725 161 27 34 chr2 25953440 25953738 -224734116 + AluJo SINE Alu 1 296 -16 1577 194 27 3 chr2 25953840 25954133 -224733721 - AluJo SINE Alu -11 301 2 2407 86 0 3 chr2 25954904 25955205 -224732649 - AluY SINE Alu -11 300 1 2066 140 0 0 chr2 25955232 25955525 -224732329 - AluSx SINE Alu -17 295 3 14449 129 95 22 chr2 25955641 25955671 -224732183 + Tigger2 DNA MER2_type 26 52 -2666 784 173 0 16 chr2 25955671 25955798 -224732056 - FLAM_A SINE Alu -8 125 1 14449 129 95 22 chr2 25955798 25956662 -224731192 + Tigger2 DNA MER2_type 52 852 -1866 2574 47 7 0 chr2 25956662 25956962 -224730892 + AluY SINE Alu 1 302 -9 14449 129 95 22 chr2 25956962 25958577 -224729277 + Tigger2 DNA MER2_type 852 2718 0 968 185 0 5 chr2 25958671 25958894 -224728960 - AluJo SINE Alu 0 344 123 4858 186 59 12 chr2 25958900 25959750 -224728104 - L1MB3 LINE L1 0 6183 5375 1712 156 7 21 chr2 25959750 25960032 -224727822 - AluJb SINE Alu -3 309 32 4858 186 59 12 chr2 25960032 25960611 -224727243 - L1MB3 LINE L1 -808 5375 4676 1772 133 3 53 chr2 25960611 25960913 -224726941 + AluSx SINE Alu 1 287 -25 4858 186 59 12 chr2 25960913 25960996 -224726858 - L1MB3 LINE L1 -1507 4676 4598 2134 160 9 0 chr2 25962387 25962718 -224725136 - MER1B DNA MER1_type 0 339 6 2355 94 3 0 chr2 25963306 25963613 -224724241 + AluSc SINE Alu 1 308 -1 25 31 0 0 chr2 25963683 25963715 -224724139 + AT_rich Low_complexity Low_complexity 1 32 0 648 236 115 0 chr2 25964625 25964782 -224723072 - FAM SINE Alu 0 175 1 1096 201 121 26 chr2 25964794 25965058 -224722796 - AluJo SINE Alu -18 294 6 1210 118 148 15 chr2 25965487 25965690 -224722164 + MER30 DNA MER1_type 1 230 0 973 253 91 83 chr2 25966159 25966574 -224721280 - L1MC/D LINE L1 -1992 5816 5395 2203 105 3 0 chr2 25966574 25966868 -224720986 - AluSq SINE Alu -18 295 1 973 253 91 83 chr2 25966868 25966969 -224720885 - L1MC/D LINE L1 -2413 5395 5296 33 0 0 0 chr2 25967477 25967510 -224720344 + AT_rich Low_complexity Low_complexity 1 33 0 1087 216 80 31 chr2 25967598 25967922 -224719932 + L1ME3 LINE L1 5822 6161 -1 2349 103 0 0 chr2 25967977 25968289 -224719565 - AluSx SINE Alu 0 312 1 365 233 120 8 chr2 25968290 25968423 -224719431 - L1ME4a LINE L1 -6 6115 5968 1670 161 4 7 chr2 25968458 25968732 -224719122 - AluJo SINE Alu -39 273 1 2529 55 0 22 chr2 25972156 25972468 -224715386 + AluY SINE Alu 1 305 -6 2498 67 10 0 chr2 25972473 25972772 -224715082 + AluSx SINE Alu 1 302 -10 2590 87 0 0 chr2 25973026 25973337 -224714517 + AluSx SINE Alu 2 312 0 288 277 0 0 chr2 25973925 25973990 -224713864 - MIR SINE MIR -152 110 46 2558 64 6 3 chr2 25974771 25975083 -224712771 - AluSp SINE Alu 0 313 1 2398 83 0 3 chr2 25975099 25975400 -224712454 - AluSc SINE Alu -9 300 1 1475 209 123 90 chr2 25975747 25976436 -224711418 + L1MC5 LINE L1 6731 7442 -519 2085 122 0 7 chr2 25976596 25976884 -224710970 - AluSx SINE Alu -26 286 1 1738 175 0 45 chr2 25977024 25977332 -224710522 + AluJb SINE Alu 1 294 -18 576 310 148 36 chr2 25977475 25977859 -224709995 - LTR67 LTR ERVL -129 428 2 181 208 146 0 chr2 25977864 25977912 -224709942 + MER5B DNA MER1_type 1 55 -123 620 218 8 0 chr2 25977927 25978051 -224709803 + FLAM_C SINE Alu 7 131 -12 228 243 184 19 chr2 25978054 25978157 -224709697 - MER5B DNA MER1_type -55 123 4 306 278 28 28 chr2 25978175 25978283 -224709571 + MER5A DNA MER1_type 9 116 -73 2195 112 23 0 chr2 25978736 25979039 -224708815 + AluSx SINE Alu 3 312 0 2348 104 0 0 chr2 25979043 25979340 -224708514 + AluSg SINE Alu 1 297 -13 334 302 101 92 chr2 25979687 25980299 -224707555 + HAL1 LINE L1 45 662 -1845 1113 160 11 0 chr2 25980457 25980638 -224707216 + AluSc SINE Alu 127 309 0 496 260 114 62 chr2 25980702 25980929 -224706925 + HAL1 LINE L1 874 1112 -1395 2234 116 0 38 chr2 25980930 25981249 -224706605 + AluSx SINE Alu 1 307 -5 551 54 0 0 chr2 25981256 25981330 -224706524 + MSTD LTR MaLR 323 396 0 429 247 107 27 chr2 25981380 25981530 -224706324 + HAL1 LINE L1 1611 1772 -735 376 240 39 10 chr2 25981714 25981818 -224706036 + L2 LINE L2 3201 3307 -6 1646 188 18 3 chr2 25981818 25982100 -224705754 + AluJo SINE Alu 1 286 -26 243 0 0 0 chr2 25982100 25982106 -224705748 + (TG)n Simple_repeat Simple_repeat 1 33 0 243 0 0 0 chr2 25982106 25982133 -224705721 + (TG)n Simple_repeat Simple_repeat 2 28 0 2202 94 0 4 chr2 25982476 25982752 -224705102 - AluSx SINE Alu -17 295 21 953 261 35 32 chr2 25982752 25983062 -224704792 + L2 LINE L2 3002 3312 -1 207 0 0 0 chr2 25983220 25983243 -224704611 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 817 159 23 0 chr2 25983274 25983406 -224704448 + AluJb SINE Alu 1 135 -177 2233 99 26 10 chr2 25984069 25984372 -224703482 - AluSg SINE Alu -2 308 1 2148 140 0 6 chr2 25985081 25985395 -224702459 - AluSx SINE Alu 0 312 1 21 57 0 0 chr2 25985408 25985443 -224702411 + AT_rich Low_complexity Low_complexity 1 35 0 800 97 0 0 chr2 25985443 25985546 -224702308 - AluSg/x SINE Alu -14 298 196 1245 136 0 22 chr2 25985585 25985601 -224702253 + AluJo SINE Alu 121 136 -176 2309 118 0 0 chr2 25985601 25985907 -224701947 + AluSx SINE Alu 1 306 -6 1245 136 0 22 chr2 25985907 25986074 -224701780 + AluJo SINE Alu 136 300 -12 11106 175 29 26 chr2 25986277 25987496 -224700358 + L1MB1 LINE L1 2737 3951 -2217 2420 105 3 0 chr2 25987496 25987800 -224700054 + AluSx SINE Alu 1 305 -7 11106 175 29 26 chr2 25987800 25989751 -224698103 + L1MB1 LINE L1 3951 5921 -247 2394 112 3 0 chr2 25989751 25990063 -224697791 + AluSq SINE Alu 1 313 0 11106 175 29 26 chr2 25990063 25990278 -224697576 + L1MB1 LINE L1 5921 6134 -34 1695 127 42 81 chr2 25990278 25990585 -224697269 + AluJo SINE Alu 1 295 -17 2076 117 7 0 chr2 25990634 25990948 -224696906 - AluSq SINE Alu 0 316 1 4084 148 28 79 chr2 25990972 25991212 -224696642 + L1MB5 LINE L1 5272 5523 -651 2427 67 3 3 chr2 25991212 25991511 -224696343 + AluY SINE Alu 1 299 -12 4084 148 28 79 chr2 25991511 25992140 -224695714 + L1MB5 LINE L1 5523 6092 -82 2077 150 0 16 chr2 25992140 25992453 -224695401 - AluJo SINE Alu -4 308 1 4084 148 28 79 chr2 25992453 25992533 -224695321 + L1MB5 LINE L1 6092 6174 0 1510 118 18 109 chr2 25992583 25992914 -224694940 - MER50 LTR ERV1 -1 733 433 1248 140 13 42 chr2 25992908 25993029 -224694825 - MER50 LTR ERV1 -505 229 117 * 2359 95 0 25 chr2 25993029 25993344 -224694510 + AluSx SINE Alu 1 307 -5 1248 140 13 42 chr2 25993344 25993458 -224694396 - MER50 LTR ERV1 -617 117 1 2307 125 0 0 chr2 25993485 25993797 -224694057 + AluSx SINE Alu 1 312 0 1798 83 8 43 chr2 25994059 25994313 -224693541 + AluSx SINE Alu 51 295 -17 1402 201 3 15 chr2 25994542 25994871 -224692983 - L1M4 LINE L1 -1033 5113 4789 2640 55 7 0 chr2 25995007 25995316 -224692538 - AluY SINE Alu 0 311 1 1906 100 130 0 chr2 25995462 25995723 -224692131 - AluSx SINE Alu -17 295 1 2105 113 44 0 chr2 25995802 25996095 -224691759 + AluSx SINE Alu 1 306 -6 2314 111 0 0 chr2 25997413 25997719 -224690135 + AluSx SINE Alu 2 307 -5 703 189 8 0 chr2 25998254 25998381 -224689473 + FLAM_A SINE Alu 2 129 -4 21 36 0 0 chr2 25998381 25998409 -224689445 + AT_rich Low_complexity Low_complexity 1 28 0 1727 167 36 16 chr2 25999253 25999559 -224688295 - AluJo SINE Alu 0 312 1 1811 189 27 30 chr2 25999594 25999842 -224688012 + MER63B DNA MER1_type 1 249 -813 880 178 12 0 chr2 25999842 26000005 -224687849 + FRAM SINE Alu 1 165 -1 1811 189 27 30 chr2 26000005 26000157 -224687697 + MER63B DNA MER1_type 249 400 -36 2141 130 7 0 chr2 26000171 26000471 -224687383 - AluSx SINE Alu -10 302 1 2055 138 10 0 chr2 26000781 26001079 -224686775 - AluJb SINE Alu -11 301 1 2566 87 0 3 chr2 26001086 26001398 -224686456 - AluSq SINE Alu -2 311 1 351 186 58 106 chr2 26001429 26001617 -224686237 + L1MC5 LINE L1 7206 7384 -577 311 197 0 0 chr2 26001624 26001690 -224686164 + MER63B DNA MER1_type 332 397 -38 2170 130 0 13 chr2 26001748 26002049 -224685805 - AluSx SINE Alu -10 302 6 493 186 124 0 chr2 26002125 26002238 -224685616 + FLAM_A SINE Alu 1 127 -6 536 165 148 9 chr2 26002284 26002399 -224685455 + AluJo/FLAM SINE Alu 3 133 -179 2112 111 47 3 chr2 26002401 26002699 -224685155 + AluSx SINE Alu 1 311 -1 460 170 28 0 chr2 26002702 26002808 -224685046 + L1MB8 LINE L1 6064 6172 -6 245 119 0 51 chr2 26002813 26002872 -224684982 + Alu SINE Alu 247 302 0 251 316 32 25 chr2 26002891 26003049 -224684805 + L1MC5 LINE L1 7778 7936 -25 1935 131 4 0 chr2 26003351 26003619 -224684235 - AluJb SINE Alu -16 296 28 2272 80 0 100 chr2 26004817 26005156 -224682698 - AluSx SINE Alu -7 305 1 401 307 7 7 chr2 26005376 26005526 -224682328 + MIR3 SINE MIR 34 183 -25 1392 76 4 143 chr2 26005670 26005908 -224681946 + AluSx SINE Alu 48 252 -60 2172 120 0 7 chr2 26006149 26006458 -224681396 + AluSx SINE Alu 1 307 -5 232 152 43 0 chr2 26006748 26006794 -224681060 + MIR SINE MIR 102 149 -113 469 187 0 101 chr2 26007067 26007265 -224680589 + G-rich Low_complexity Low_complexity 1 178 0 184 80 0 93 chr2 26007300 26007375 -224680479 + (CGGGGG)n Simple_repeat Simple_repeat 2 69 0 38 101 0 0 chr2 26007402 26007531 -224680323 + GC_rich Low_complexity Low_complexity 1 129 0 202 270 0 27 chr2 26007922 26007996 -224679858 + C-rich Low_complexity Low_complexity 2 73 0 240 35 0 0 chr2 26009391 26009420 -224678434 + (CA)n Simple_repeat Simple_repeat 1 29 0 381 276 26 0 chr2 26011425 26011541 -224676313 - MIR3 SINE MIR -52 156 38 364 338 93 0 chr2 26011665 26011816 -224676038 - MIR SINE MIR -12 250 86 701 171 16 0 chr2 26011830 26011959 -224675895 - FLAM_C SINE Alu -2 131 1 1848 113 35 0 chr2 26011986 26012242 -224675612 - AluSq SINE Alu -48 265 1 1199 183 30 104 chr2 26012608 26012936 -224674918 + AluJo SINE Alu 9 312 0 200 189 0 0 chr2 26013191 26013228 -224674626 + G-rich Low_complexity Low_complexity 3 39 0 601 236 28 7 chr2 26013632 26013776 -224674078 - MIR SINE MIR -114 148 2 256 246 0 14 chr2 26014225 26014294 -224673560 + G-rich Low_complexity Low_complexity 5 72 0 2174 109 3 3 chr2 26014928 26015232 -224672622 - AluSx SINE Alu 0 304 1 254 281 94 31 chr2 26015447 26015607 -224672247 + L2 LINE L2 2715 2884 -430 296 310 140 29 chr2 26015791 26015962 -224671892 + L2 LINE L2 3124 3313 0 2040 132 11 0 chr2 26016013 26016300 -224671554 + AluJo SINE Alu 1 290 -22 310 232 160 8 chr2 26016790 26016915 -224670939 - MIR3 SINE MIR -12 196 53 1831 138 14 7 chr2 26017761 26018060 -224669794 + AluJo SINE Alu 5 305 0 36 82 0 0 chr2 26018697 26018782 -224669072 + GC_rich Low_complexity Low_complexity 1 85 0 228 189 0 40 chr2 26019279 26019353 -224668501 + (CCCG)n Simple_repeat Simple_repeat 4 74 0 24 32 0 0 chr2 26019409 26019440 -224668414 + GC_rich Low_complexity Low_complexity 1 31 0 386 113 50 75 chr2 26019958 26020038 -224667816 - MER103 DNA DNA -42 124 47 2175 111 3 13 chr2 26021009 26021315 -224666539 + AluSx SINE Alu 1 303 -9 183 162 0 0 chr2 26021983 26022020 -224665834 + CT-rich Low_complexity Low_complexity 2 38 0 513 27 147 0 chr2 26026473 26026548 -224661306 + L1PA7 LINE L1 6069 6154 0 1629 97 202 0 chr2 26026820 26027077 -224660777 + AluJb SINE Alu 1 309 -3 796 188 0 0 chr2 26027610 26027743 -224660111 - FLAM_A SINE Alu 0 133 1 800 175 40 11 chr2 26030054 26030231 -224657623 + MER5A DNA MER1_type 1 182 -7 262 302 135 10 chr2 26030364 26030556 -224657298 - MIR SINE MIR -13 249 34 576 179 50 25 chr2 26030705 26030846 -224657008 - L1ME2 LINE L1 -9 6155 6033 451 194 107 10 chr2 26030846 26030949 -224656905 - MER81 DNA DNA -1 113 1 576 179 50 25 chr2 26030949 26030962 -224656892 - L1ME2 LINE L1 -131 6033 6022 717 109 0 0 chr2 26032685 26032786 -224655068 - AluSg/x SINE Alu -6 304 204 492 282 74 79 chr2 26032787 26033086 -224654768 + L3 LINE CR1 637 935 -642 1646 173 0 65 chr2 26033086 26033212 -224654642 + AluJo SINE Alu 5 138 -174 2195 110 0 10 chr2 26033212 26033511 -224654343 - AluSg SINE Alu -14 296 1 1646 173 0 65 chr2 26033511 26033707 -224654147 + AluJo SINE Alu 138 306 -6 492 282 74 79 chr2 26033707 26033787 -224654067 + L3 LINE CR1 935 1014 -563 589 212 18 0 chr2 26033878 26033991 -224653863 + MLT1H LTR MaLR 81 195 -354 26 30 0 0 chr2 26034018 26034051 -224653803 + AT_rich Low_complexity Low_complexity 1 33 0 253 196 22 0 chr2 26034262 26034308 -224653546 + MLT1G1 LTR MaLR 479 525 -70 198 103 0 0 chr2 26034451 26034480 -224653374 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2276 105 0 3 chr2 26035051 26035347 -224652507 - AluSg SINE Alu -15 295 1 2342 81 0 23 chr2 26036104 26036414 -224651440 - AluSg1 SINE Alu -6 303 1 1973 157 7 0 chr2 26036774 26037068 -224650786 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 26038631 26038654 -224649200 + AT_rich Low_complexity Low_complexity 1 23 0 1685 155 10 27 chr2 26038899 26039196 -224648658 - AluJo SINE Alu -13 299 8 200 268 14 14 chr2 26039223 26039294 -224648560 + L2 LINE L2 2589 2659 -655 245 241 146 36 chr2 26039783 26039853 -224648001 + L1MC/D LINE L1 5100 5161 -985 1701 133 72 29 chr2 26039853 26040132 -224647722 + AluSg SINE Alu 1 291 -19 245 241 146 36 chr2 26040132 26040335 -224647519 + L1MC/D LINE L1 5161 5403 -743 853 128 0 0 chr2 26040335 26040452 -224647402 + FLAM_C SINE Alu 2 118 -15 271 278 192 45 chr2 26040472 26040542 -224647312 + L1MC/D LINE L1 5380 5438 -2370 2349 109 0 0 chr2 26040542 26040844 -224647010 - AluSq SINE Alu -11 302 1 271 278 192 45 chr2 26040844 26041107 -224646747 + L1MC/D LINE L1 5438 5762 -2046 1666 211 0 0 chr2 26041231 26041525 -224646329 + AluJo SINE Alu 1 294 -18 1291 130 19 10 chr2 26043342 26043549 -224644305 - MER20 DNA MER1_type -8 211 3 508 296 12 12 chr2 26044488 26044657 -224643197 - MIR3 SINE MIR -3 205 37 2406 68 3 0 chr2 26044667 26044959 -224642895 - AluY SINE Alu -18 293 1 227 241 60 24 chr2 26045120 26045203 -224642651 + MIR SINE MIR 124 209 -53 261 275 101 42 chr2 26045381 26045570 -224642284 - MER112 DNA MER1_type -1 259 60 1741 161 94 0 chr2 26045673 26046002 -224641852 + MER46B DNA MER2_type 1 235 -1 1986 160 0 13 chr2 26046390 26046702 -224641152 - AluJo SINE Alu -4 308 1 569 158 123 35 chr2 26050324 26050438 -224637416 + FLAM_C SINE Alu 10 133 -10 2300 116 0 0 chr2 26050633 26050934 -224636920 - AluSx SINE Alu -9 303 3 406 306 27 27 chr2 26051049 26051235 -224636619 + L1MEc LINE L1 318 503 -5893 * 497 272 26 5 chr2 26051217 26051408 -224636446 + L1MEc LINE L1 820 1014 -5382 475 143 88 11 chr2 26051418 26051509 -224636345 + FLAM_A SINE Alu 29 126 -16 2012 251 84 46 chr2 26051516 26051934 -224635920 + L1MEc LINE L1 1068 1468 -4928 1879 160 13 32 chr2 26051934 26052246 -224635608 + AluJo SINE Alu 1 306 -6 2012 251 84 46 chr2 26052246 26052343 -224635511 + L1MEc LINE L1 1468 1560 -4836 1972 141 37 0 chr2 26052343 26052641 -224635213 + AluSq SINE Alu 1 309 -4 2012 251 84 46 chr2 26052641 26053042 -224634812 + L1MEc LINE L1 1560 1944 -4452 2277 119 7 0 chr2 26053042 26053352 -224634502 + AluSx SINE Alu 1 312 0 2012 251 84 46 chr2 26053352 26053455 -224634399 + L1MEc LINE L1 1944 2042 -4354 2170 98 7 3 chr2 26053455 26053741 -224634113 - AluSg SINE Alu -23 287 1 2012 251 84 46 chr2 26053741 26053807 -224634047 + L1MEc LINE L1 2042 2198 -4198 9100 191 46 11 chr2 26053809 26056303 -224631551 + ERVL-C1 LTR ERVL 1337 3972 -1792 2285 122 31 36 chr2 26056303 26056695 -224631159 + MLT1B LTR MaLR 1 390 0 9100 191 46 11 chr2 26056695 26056959 -224630895 + ERVL-C1 LTR ERVL 3972 4225 -1539 4389 195 32 20 chr2 26056977 26057828 -224630026 + ERVL-C1 LTR ERVL 4461 5321 -443 2173 194 92 49 chr2 26057834 26058055 -224629799 + MER76 LTR ERV 103 313 -375 2333 114 0 0 chr2 26058055 26058361 -224629493 - AluSx SINE Alu -6 306 1 2173 194 92 49 chr2 26058361 26058691 -224629163 + MER76 LTR ERV 313 678 -10 1497 181 135 3 chr2 26058729 26059077 -224628777 + ERVL-C1 LTR ERVL 5362 5755 -9 501 178 69 0 chr2 26059093 26059194 -224628660 + MLT2C1 LTR ERVL 17 124 -273 820 255 76 19 chr2 26059203 26059517 -224628337 + L1MEc LINE L1 3352 3683 -2532 456 113 0 36 chr2 26059517 26059738 -224628116 + AluSc SINE Alu 1 305 -4 4742 233 86 12 chr2 26059740 26061118 -224626736 + L1MEc LINE L1 3691 5192 -1023 1602 189 107 42 chr2 26061086 26061544 -224626310 + L1ME1 LINE L1 5023 5538 -697 * 2206 128 0 0 chr2 26061544 26061849 -224626005 + AluSx SINE Alu 1 305 -7 1602 189 107 42 chr2 26061849 26062008 -224625846 + L1ME1 LINE L1 5538 5685 -550 571 179 0 68 chr2 26062012 26062129 -224625725 + FLAM_A SINE Alu 11 119 -23 1227 152 9 42 chr2 26062129 26062346 -224625508 - AluJo SINE Alu -15 297 88 1423 198 24 49 chr2 26062354 26062450 -224625404 + L1ME1 LINE L1 5653 5750 -485 2280 115 0 0 chr2 26062450 26062745 -224625109 - AluSx SINE Alu -17 295 1 1423 198 24 49 chr2 26062745 26062977 -224624877 + L1ME1 LINE L1 5750 5973 -262 1593 179 13 47 chr2 26062993 26063294 -224624560 - AluJo SINE Alu -21 291 1 301 164 82 27 chr2 26063301 26063374 -224624480 + L1ME1 LINE L1 6128 6204 -31 1397 228 11 4 chr2 26063374 26063646 -224624208 + AluJo SINE Alu 3 276 -36 234 0 0 0 chr2 26063663 26063689 -224624165 + (CA)n Simple_repeat Simple_repeat 1 26 0 2036 121 17 7 chr2 26064147 26064437 -224623417 - AluSx SINE Alu -19 293 1 1995 124 11 7 chr2 26064952 26065255 -224622599 + AluSq SINE Alu 1 304 0 3243 176 48 59 chr2 26066057 26066801 -224621053 - L1MB5 LINE L1 -76 6098 5363 443 143 199 93 chr2 26066832 26066993 -224620861 - AluSp SINE Alu -21 292 115 252 111 0 0 chr2 26067238 26067283 -224620571 + (TG)n Simple_repeat Simple_repeat 1 45 0 261 230 96 111 chr2 26067530 26067665 -224620189 - MIR3 SINE MIR -44 164 32 202 277 24 60 chr2 26068034 26068117 -224619737 + L3 LINE CR1 1429 1508 -69 405 188 141 74 chr2 26068212 26068312 -224619542 - MER58C DNA MER1_type -2205 215 100 2299 77 16 19 chr2 26068312 26068623 -224619231 - AluSq SINE Alu -3 310 1 405 188 141 74 chr2 26068623 26068671 -224619183 - MER58C DNA MER1_type -2320 100 57 186 167 0 0 chr2 26068912 26068948 -224618906 + (TG)n Simple_repeat Simple_repeat 2 37 0 323 227 182 0 chr2 26068966 26069054 -224618800 - MIR SINE MIR -153 109 6 183 139 0 0 chr2 26069198 26069234 -224618620 + (CCCTA)n Simple_repeat Simple_repeat 2 37 0 440 216 85 51 chr2 26069356 26069532 -224618322 - L1ME4a LINE L1 -1 6120 5939 1851 175 15 18 chr2 26069545 26069888 -224617966 - MER2 DNA MER2_type 0 344 3 616 246 18 61 chr2 26070131 26070359 -224617495 - L1MC4a LINE L1 -1903 5905 5688 415 82 0 0 chr2 26070363 26070424 -224617430 - Alu SINE Alu -13 298 238 271 310 61 41 chr2 26070486 26070731 -224617123 - L1MC4a LINE L1 -449 5672 5423 180 0 0 0 chr2 26070733 26070753 -224617101 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2491 84 0 0 chr2 26070756 26071055 -224616799 + AluSc SINE Alu 1 299 -10 2318 157 66 23 chr2 26071055 26071496 -224616358 + L1MB2 LINE L1 5665 6124 -47 596 114 0 0 chr2 26071500 26071579 -224616275 + AluJ/FLAM SINE Alu 13 91 -221 839 146 26 1 chr2 26071580 26071732 -224616122 - L1MB2 LINE L1 -260 5911 5753 383 221 29 39 chr2 26071886 26071990 -224615864 - L2 LINE L2 -1 3312 3210 630 168 35 0 chr2 26072188 26072301 -224615553 - AluSg/x SINE Alu -5 304 188 227 161 0 36 chr2 26072301 26072357 -224615497 + T-rich Low_complexity Low_complexity 3 56 0 1751 131 94 0 chr2 26072380 26072655 -224615199 + AluJb SINE Alu 3 303 -9 351 0 0 0 chr2 26072700 26072739 -224615115 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 183 32 86 chr2 26072745 26072838 -224615016 + L1MA9 LINE L1 6183 6270 -42 3922 98 36 23 chr2 26072940 26073437 -224614417 + LTR38B LTR ERV1 1 509 -101 2126 93 10 7 chr2 26073437 26073726 -224614128 - AluSx SINE Alu -22 290 1 3922 98 36 23 chr2 26073726 26073830 -224614024 + LTR38B LTR ERV1 509 610 0 3217 124 23 2 chr2 26073892 26074369 -224613485 + LTR15 LTR ERV1 1 487 -6 7672 146 60 35 chr2 26074375 26076004 -224611850 + HERV15 LTR ERV1 1 1387 -7039 4019 259 22 28 chr2 26075993 26077026 -224610828 + HERV15 LTR ERV1 1701 2727 -5699 * 1761 275 98 20 chr2 26077207 26077983 -224609871 - HERV16 LTR ERVL -2759 2237 1598 323 325 0 0 chr2 26078049 26078126 -224609728 - L2 LINE L2 -58 3214 3138 2200 112 7 3 chr2 26078375 26078680 -224609174 - AluSx SINE Alu -6 306 1 1300 241 145 10 chr2 26078693 26079092 -224608762 - MER97a DNA MER1_type? -438 456 4 2185 106 0 10 chr2 26079147 26079449 -224608405 + AluSx SINE Alu 1 299 -13 361 77 0 0 chr2 26079536 26079588 -224608266 - AluSp SINE Alu 0 302 251 1842 119 15 0 chr2 26079694 26079955 -224607899 - AluSp SINE Alu -48 265 1 242 262 48 0 chr2 26079958 26080084 -224607770 - L1P LINE L1 -846 5300 5169 1482 141 109 62 chr2 26080203 26080479 -224607375 + AluJo SINE Alu 1 289 -23 332 324 33 52 chr2 26080507 26080837 -224607017 - L1M4 LINE L1 -1085 5061 4738 2124 127 3 3 chr2 26080838 26081138 -224606716 - AluJo SINE Alu -12 300 1 1958 226 94 8 chr2 26081494 26081984 -224605870 - MLT1F LTR MaLR -8 534 3 1711 256 106 16 chr2 26082132 26082820 -224605034 - L1MC4a LINE L1 -101 6020 5270 414 268 45 57 chr2 26082975 26083132 -224604722 - L1MC4 LINE L1 -143 7899 7745 659 225 62 77 chr2 26083171 26083221 -224604633 + MIR SINE MIR 20 69 -193 2111 99 7 3 chr2 26083221 26083554 -224604300 + AluSq SINE Alu 1 334 0 659 225 62 77 chr2 26083554 26083711 -224604143 + MIR SINE MIR 69 225 -37 24 0 0 0 chr2 26083973 26083997 -224603857 + AT_rich Low_complexity Low_complexity 1 24 0 2355 106 3 0 chr2 26084867 26085178 -224602676 + AluSx SINE Alu 1 312 0 354 240 29 19 chr2 26085195 26085316 -224602538 + MIR SINE MIR 33 154 -64 187 276 195 23 chr2 26085708 26085795 -224602059 + L2 LINE L2 3139 3240 -32 180 0 0 0 chr2 26086177 26086197 -224601657 + (TA)n Simple_repeat Simple_repeat 1 20 0 212 292 56 11 chr2 26086295 26086384 -224601470 - MIR3 SINE MIR -4 204 112 3159 138 0 24 chr2 26086587 26086760 -224601094 - HERVK22 LTR ERVK -6026 811 635 2519 84 0 0 chr2 26086760 26087069 -224600785 - AluY SINE Alu -2 309 1 3159 138 0 24 chr2 26087069 26087387 -224600467 - HERVK22 LTR ERVK -6202 635 332 1037 77 0 8 chr2 26087387 26087517 -224600337 + AluY SINE Alu 1 129 -182 585 162 29 0 chr2 26087617 26087722 -224600132 - AluJb SINE Alu -203 109 2 824 278 28 24 chr2 26087733 26088024 -224599830 + HAL1 LINE L1 2 293 -2214 879 253 106 76 chr2 26088050 26088740 -224599114 + MER49 LTR ERV1 15 923 0 1004 263 50 66 chr2 26088832 26089097 -224598757 + HAL1 LINE L1 435 695 -1812 2167 93 11 0 chr2 26089097 26089399 -224598455 + AluSx SINE Alu 3 307 0 1004 263 50 66 chr2 26089399 26089513 -224598341 + HAL1 LINE L1 695 809 -1698 1854 165 7 7 chr2 26089525 26089834 -224598020 - AluJo SINE Alu -3 309 1 1772 176 106 131 chr2 26090419 26090849 -224597005 + HAL1 LINE L1 805 1244 -1263 2374 91 0 0 chr2 26090849 26091175 -224596679 - AluSq SINE Alu 0 326 1 1772 176 106 131 chr2 26091175 26091415 -224596439 + HAL1 LINE L1 1244 1455 -1052 309 26 0 0 chr2 26091415 26091453 -224596401 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1772 176 106 131 chr2 26091453 26091612 -224596242 + HAL1 LINE L1 1455 1616 -891 1405 162 62 26 chr2 26091811 26092120 -224595734 - MER33 DNA MER1_type -4 320 1 1516 121 0 0 chr2 26092207 26092413 -224595441 + AluSc SINE Alu 88 293 -16 954 97 0 0 chr2 26092867 26093001 -224594853 + AluSp/q SINE Alu 179 312 -1 2518 55 0 16 chr2 26093375 26093685 -224594169 - AluY SINE Alu -6 305 1 1014 300 88 16 chr2 26093709 26094326 -224593528 - L1MC4a LINE L1 -1893 5915 5255 762 170 0 43 chr2 26094519 26094660 -224593194 - AluJo SINE Alu -176 136 2 276 30 0 0 chr2 26094719 26094752 -224593102 + (TTA)n Simple_repeat Simple_repeat 2 34 0 695 178 0 8 chr2 26094761 26094879 -224592975 - FLAM_C SINE Alu -25 118 2 2132 114 3 13 chr2 26096253 26096559 -224591295 + AluSx SINE Alu 1 303 -9 480 103 0 0 chr2 26096847 26096915 -224590939 - AluSc SINE Alu -8 301 234 1001 79 0 8 chr2 26096915 26097041 -224590813 - AluSc SINE Alu -184 125 1 1714 228 34 55 chr2 26097065 26097386 -224590468 - L1MC4a LINE L1 -1037 5109 4783 2748 119 41 2 chr2 26097386 26097797 -224590057 - MSTA LTR MaLR 0 428 2 1714 228 34 55 chr2 26097797 26097926 -224589928 - L1MC4a LINE L1 -1363 4783 4671 2088 145 7 0 chr2 26097926 26098230 -224589624 - AluSx SINE Alu -6 306 1 1714 228 34 55 chr2 26098230 26098343 -224589511 - L1MC4a LINE L1 -1475 4671 4557 438 250 17 0 chr2 26098389 26098509 -224589345 - L1MC4a LINE L1 -1792 4354 4233 842 229 79 12 chr2 26098658 26098900 -224588954 + MIR SINE MIR 3 262 0 29 0 0 0 chr2 26099753 26099782 -224588072 + AT_rich Low_complexity Low_complexity 1 29 0 503 269 98 57 chr2 26100012 26100181 -224587673 - Charlie8 DNA MER1_type -65 276 91 2351 91 0 3 chr2 26100181 26100479 -224587375 - AluSg SINE Alu -13 297 1 503 269 98 57 chr2 26100479 26100573 -224587281 - Charlie8 DNA MER1_type -250 91 2 251 335 92 10 chr2 26100573 26100779 -224587075 + L2 LINE L2 2535 2757 -557 1813 170 10 0 chr2 26100827 26101121 -224586733 - AluJb SINE Alu -15 297 1 617 214 312 0 chr2 26101470 26101624 -224586230 + Tigger5 DNA MER2_type 11 212 -2111 2249 116 0 0 chr2 26101624 26101917 -224585937 + AluSx SINE Alu 1 293 -19 1853 96 49 146 chr2 26101917 26102107 -224585747 - HERVK22 LTR ERVK -6489 348 212 4894 117 32 38 chr2 26102107 26102892 -224584962 - LTR17 LTR ERV1 0 780 1 1853 96 49 146 chr2 26102892 26103086 -224584768 - HERVK22 LTR ERVK -6625 212 1 3312 93 18 7 chr2 26103087 26103540 -224584314 - LTR22A LTR ERVK 0 458 1 2264 117 3 0 chr2 26103960 26104269 -224583585 - AluSx SINE Alu -2 310 1 188 329 0 0 chr2 26105308 26105381 -224582473 + L2 LINE L2 2284 2356 -958 2107 136 0 0 chr2 26105381 26105675 -224582179 + AluSx SINE Alu 1 294 -18 227 311 0 0 chr2 26106177 26106251 -224581603 + L1MC/D LINE L1 5812 5885 -1923 21 0 0 0 chr2 26106802 26106823 -224581031 + AT_rich Low_complexity Low_complexity 1 21 0 2424 95 3 0 chr2 26106905 26107209 -224580645 + AluSx SINE Alu 1 305 -7 345 215 20 114 chr2 26108052 26108154 -224579700 + L1MD3 LINE L1 5794 5879 -1929 2165 134 0 16 chr2 26108154 26108461 -224579393 + AluJb SINE Alu 1 302 -10 345 215 20 114 chr2 26108461 26108507 -224579347 + L1MD3 LINE L1 5879 5928 -1880 1782 154 74 0 chr2 26108616 26108901 -224578953 + AluSx SINE Alu 1 306 -6 2162 134 0 0 chr2 26109201 26109511 -224578343 + AluSx SINE Alu 1 310 0 1316 130 0 211 chr2 26109806 26110175 -224577679 + AluJo SINE Alu 1 291 -21 1953 128 34 7 chr2 26110485 26110782 -224577072 + AluSx SINE Alu 1 305 -7 3389 156 180 137 chr2 26111090 26111411 -224576443 + L1MD3 LINE L1 6736 7042 -953 2111 94 0 0 chr2 26111411 26111677 -224576177 + AluSx SINE Alu 35 300 -12 3389 156 180 137 chr2 26111677 26111754 -224576100 + L1MD3 LINE L1 7042 7114 -881 1706 173 10 23 chr2 26111754 26112061 -224575793 + AluJo SINE Alu 10 312 0 3389 156 180 137 chr2 26112061 26112192 -224575662 + L1MD3 LINE L1 7114 7238 -757 526 239 26 8 chr2 26112192 26112309 -224575545 + MLT1F1 LTR MaLR 1 119 -448 3389 156 180 137 chr2 26112309 26112752 -224575102 + L1MD3 LINE L1 7238 7660 -335 2404 90 0 7 chr2 26112752 26113053 -224574801 + AluSq SINE Alu 1 299 -14 3389 156 180 137 chr2 26113053 26113110 -224574744 + L1MD3 LINE L1 7660 7713 -282 1544 184 25 22 chr2 26113110 26113388 -224574466 - AluJo SINE Alu -33 279 1 3389 156 180 137 chr2 26113388 26113445 -224574409 + L1MD3 LINE L1 7713 7994 -1 27 29 0 0 chr2 26113481 26113515 -224574339 + AT_rich Low_complexity Low_complexity 1 34 0 2376 46 0 55 chr2 26114766 26115073 -224572781 - AluY SINE Alu -12 299 10 203 179 0 0 chr2 26115225 26115264 -224572590 + A-rich Low_complexity Low_complexity 1 39 0 1418 124 9 5 chr2 26115302 26115519 -224572335 + HERV15 LTR ERV1 3160 3377 -5358 21343 106 10 8 chr2 26115519 26118499 -224569355 + HERV15 LTR ERV1 3776 6762 -1973 8257 83 6 18 chr2 26118492 26119595 -224568259 + HERV15 LTR ERV1 6982 8071 -664 * 2791 115 8 0 chr2 26119575 26119965 -224567889 + HERV15 LTR ERV1 8343 8735 0 * 3090 122 25 21 chr2 26119965 26120450 -224567404 + LTR15 LTR ERV1 1 487 -6 270 324 0 0 chr2 26120454 26120556 -224567298 - L1MC/D LINE L1 -1939 5869 5768 1741 141 33 27 chr2 26120653 26120952 -224566902 - AluJb SINE Alu -11 301 1 2290 112 0 0 chr2 26121132 26121437 -224566417 - AluSx SINE Alu -5 307 3 2483 82 0 0 chr2 26121759 26122065 -224565789 + AluY SINE Alu 3 308 -3 45 45 0 0 chr2 26122449 26122515 -224565339 + AT_rich Low_complexity Low_complexity 1 66 0 473 329 0 22 chr2 26124524 26124661 -224563193 - MIR3 SINE MIR -64 144 11 1056 192 195 3 chr2 26129042 26129329 -224558525 - Charlie1b DNA MER1_type -181 342 1 363 322 7 20 chr2 26129409 26129555 -224558299 + GA-rich Low_complexity Low_complexity 1 144 0 766 163 8 0 chr2 26132357 26132480 -224555374 + FLAM_A SINE Alu 1 124 -9 804 160 23 6 chr2 26133559 26133734 -224554120 + CT-rich Low_complexity Low_complexity 2 179 0 825 180 0 76 chr2 26133761 26133933 -224553921 - FRAM SINE Alu -12 164 6 316 204 80 105 chr2 26134192 26134259 -224553595 + L1MC4a LINE L1 5312 5379 -2429 2231 118 3 0 chr2 26134259 26134564 -224553290 + AluSq SINE Alu 1 306 -7 316 204 80 105 chr2 26134564 26134658 -224553196 + L1MC4a LINE L1 5379 5469 -2339 397 293 89 19 chr2 26134684 26134954 -224552900 + L1MC4a LINE L1 5649 5937 -1871 2282 88 14 7 chr2 26135734 26136030 -224551824 + AluSx SINE Alu 1 298 -14 2301 99 3 16 chr2 26136043 26136357 -224551497 + AluSg SINE Alu 1 310 0 188 211 105 40 chr2 26136684 26136760 -224551094 + L2 LINE L2 3192 3272 0 2255 87 0 27 chr2 26136893 26137192 -224550662 + AluSx SINE Alu 1 291 -21 667 206 0 22 chr2 26137512 26137648 -224550206 - FLAM_A SINE Alu 0 133 1 2039 147 3 0 chr2 26137673 26137972 -224549882 - AluSx SINE Alu -12 300 1 1781 151 25 54 chr2 26138005 26138322 -224549532 + AluJb SINE Alu 3 310 -2 5216 66 38 0 chr2 26138384 26139065 -224548789 - L1PA13 LINE L1 -2 6161 5455 2111 129 10 0 chr2 26140816 26141111 -224546743 - AluSx SINE Alu -14 298 1 1016 160 20 60 chr2 26141543 26141743 -224546111 - MSTD LTR MaLR -1 395 204 189 121 0 0 chr2 26141761 26141794 -224546060 + (GA)n Simple_repeat Simple_repeat 1 33 0 367 142 28 123 chr2 26141832 26141938 -224545916 + MSTD LTR MaLR 299 394 -2 * 793 116 0 0 chr2 26141938 26142046 -224545808 - MSTD LTR MaLR -288 108 1 271 306 47 0 chr2 26142079 26142164 -224545690 + MIR3 SINE MIR 73 161 -47 2505 215 89 19 chr2 26142165 26142489 -224545365 - L1MDb LINE L1 -4676 1864 1564 2236 99 7 3 chr2 26142489 26142793 -224545061 - AluY SINE Alu -6 305 1 2505 215 89 19 chr2 26142793 26142943 -224544911 - L1MDb LINE L1 -4976 1564 1426 1932 232 8 37 chr2 26142943 26143189 -224544665 + MLT1D LTR MaLR 4 229 -276 1912 134 25 14 chr2 26143189 26143472 -224544382 - AluJb SINE Alu -24 288 3 1932 232 8 37 chr2 26143472 26143742 -224544112 + MLT1D LTR MaLR 229 505 0 2505 215 89 19 chr2 26143742 26144228 -224543626 - L1MDb LINE L1 -5114 1426 907 316 370 93 21 chr2 26144726 26145015 -224542839 - L1MDb LINE L1 -6200 340 31 860 227 56 7 chr2 26145028 26145314 -224542540 - L1MEc LINE L1 -3166 3049 2750 2165 108 20 0 chr2 26145314 26145610 -224542244 + AluSx SINE Alu 1 302 -10 827 210 19 0 chr2 26145625 26145787 -224542067 + FRAM SINE Alu 1 165 -1 375 277 65 48 chr2 26145834 26146144 -224541710 - L1MEc LINE L1 -4052 2344 2030 2005 149 0 0 chr2 26146499 26146787 -224541067 + AluJb SINE Alu 1 288 -24 846 143 0 0 chr2 26146822 26146948 -224540906 - FLAM_C SINE Alu -7 136 11 191 387 21 0 chr2 26147191 26147284 -224540570 + L2 LINE L2 240 334 -2980 489 271 75 8 chr2 26147467 26147600 -224540254 - MER21B LTR ERV1 -654 209 68 1935 101 61 22 chr2 26147873 26148150 -224539704 - AluSx SINE Alu -20 292 5 721 212 0 0 chr2 26148215 26148347 -224539507 + FLAM_A SINE Alu 1 132 -1 2884 151 99 16 chr2 26149100 26149705 -224538149 - L1MB7 LINE L1 -41 6143 5476 302 335 79 60 chr2 26150004 26150270 -224537584 - L2 LINE L2 -16 3256 2986 429 103 0 0 chr2 26150357 26150425 -224537429 + (TG)n Simple_repeat Simple_repeat 2 69 0 2282 117 10 0 chr2 26150485 26150794 -224537060 + AluSx SINE Alu 1 312 0 643 281 45 27 chr2 26151152 26151373 -224536481 + MLT1H LTR MaLR 2 226 -323 796 138 8 0 chr2 26151377 26151507 -224536347 - L1MA9 LINE L1 0 6312 6182 601 222 24 8 chr2 26151507 26151633 -224536221 + MLT1H LTR MaLR 416 543 -6 2129 122 0 3 chr2 26151782 26152104 -224535750 + AluSx SINE Alu 1 321 0 811 182 8 0 chr2 26152274 26152406 -224535448 + FLAM_A SINE Alu 1 133 0 201 147 0 0 chr2 26152742 26152776 -224535078 + (T)n Simple_repeat Simple_repeat 1 34 0 1628 135 11 22 chr2 26152919 26153193 -224534661 - AluJo SINE Alu -30 282 12 1437 137 17 99 chr2 26153229 26153282 -224534572 + MER58B DNA MER1_type 74 130 -2290 1675 180 41 3 chr2 26153282 26153598 -224534256 + L1MC1 LINE L1 6000 6327 -6 1437 137 17 99 chr2 26153598 26153836 -224534018 + MER58B DNA MER1_type 130 341 0 1237 270 65 7 chr2 26153889 26154280 -224533574 + HERV16 LTR ERVL 2777 3235 -1906 875 144 12 24 chr2 26154282 26154449 -224533405 - AluJo SINE Alu -147 165 1 22 0 0 0 chr2 26154546 26154568 -224533286 + GC_rich Low_complexity Low_complexity 1 22 0 217 196 54 0 chr2 26155089 26155145 -224532709 - L2 LINE L2 0 3313 3255 2099 118 3 7 chr2 26155340 26155628 -224532226 + AluSx SINE Alu 3 289 -23 250 250 139 9 chr2 26155700 26155808 -224532046 + MIR SINE MIR 23 144 -64 1266 146 105 34 chr2 26156359 26156654 -224531200 + LTR52 LTR ERVL 5 320 -101 1432 128 124 0 chr2 26156748 26156998 -224530856 + L1MA5A LINE L1 5997 6277 -20 2192 131 0 10 chr2 26156998 26157311 -224530543 - AluSx SINE Alu -2 310 1 23 33 0 0 chr2 26157316 26157346 -224530508 + AT_rich Low_complexity Low_complexity 1 30 0 313 336 9 0 chr2 26157688 26157795 -224530059 + L2 LINE L2 3201 3308 -5 232 268 62 18 chr2 26157805 26157917 -224529937 + L1ME4a LINE L1 5685 5801 -361 235 193 136 23 chr2 26158007 26158095 -224529759 + L1ME4a LINE L1 5944 6041 -80 2280 90 37 0 chr2 26158362 26158661 -224529193 + AluSg SINE Alu 1 310 0 346 212 106 35 chr2 26159414 26159527 -224528327 - MIR SINE MIR -42 220 100 2277 94 7 7 chr2 26159963 26160270 -224527584 - AluSg SINE Alu -3 307 1 212 253 13 27 chr2 26161499 26161577 -224526277 + (TA)n Simple_repeat Simple_repeat 1 76 0 1927 141 0 7 chr2 26162287 26162577 -224525277 - AluSx SINE Alu -4 308 21 23 68 0 0 chr2 26162755 26162799 -224525055 + AT_rich Low_complexity Low_complexity 1 44 0 282 219 73 110 chr2 26168866 26168984 -224518870 + L1ME LINE L1 5590 5702 -419 2065 146 0 16 chr2 26168984 26169299 -224518555 - AluJb SINE Alu -2 310 1 282 219 73 110 chr2 26169299 26169344 -224518510 + L1ME LINE L1 5702 5747 -374 273 343 76 0 chr2 26170564 26170669 -224517185 + L3 LINE CR1 1459 1571 -6 330 319 88 42 chr2 26171839 26172030 -224515824 - MIR SINE MIR -63 145 2 185 342 99 33 chr2 26172278 26172430 -224515424 + MIR3 SINE MIR 44 205 -3 2353 73 10 0 chr2 26172822 26173111 -224514743 - AluSg SINE Alu -18 292 1 645 321 55 9 chr2 26173577 26173795 -224514059 + MIR SINE MIR 2 229 -33 734 198 24 0 chr2 26173870 26173996 -224513858 - FLAM_A SINE Alu -3 130 2 355 252 84 23 chr2 26174517 26174648 -224513206 + MIR3 SINE MIR 68 206 -2 201 357 14 0 chr2 26174676 26174746 -224513108 + L2 LINE L2 2260 2330 -984 279 0 0 0 chr2 26175478 26175509 -224512345 + (A)n Simple_repeat Simple_repeat 1 31 0 2365 269 106 46 chr2 26175693 26176999 -224510855 + L1MC4a LINE L1 5255 6638 -1170 22 0 0 0 chr2 26177083 26177105 -224510749 + AT_rich Low_complexity Low_complexity 1 22 0 533 215 30 106 chr2 26177221 26177438 -224510416 + L1MC5 LINE L1 7304 7499 -462 1845 126 54 0 chr2 26177438 26177715 -224510139 - AluSq SINE Alu -21 292 1 533 215 30 106 chr2 26177715 26177762 -224510092 + L1MC5 LINE L1 7499 7548 -413 557 179 27 0 chr2 26177789 26177901 -224509953 + L1MC5 LINE L1 7680 7794 -167 354 298 21 28 chr2 26177930 26178071 -224509783 + L1ME LINE L1 41 180 -5890 304 302 33 61 chr2 26178108 26178320 -224509534 + L1ME LINE L1 258 463 -5607 1819 237 90 78 chr2 26178446 26179064 -224508790 + L1ME LINE L1 271 880 -5202 2064 133 0 7 chr2 26179064 26179358 -224508496 - AluJo SINE Alu -18 294 3 1819 237 90 78 chr2 26179358 26180052 -224507802 + L1ME LINE L1 880 1514 -4568 1783 145 64 14 chr2 26180586 26180883 -224506971 - AluJo SINE Alu 0 312 1 2358 86 3 7 chr2 26181838 26182141 -224505713 + AluSp SINE Alu 1 302 -11 355 246 78 21 chr2 26182515 26182657 -224505197 + L1MC5 LINE L1 7637 7786 -175 1302 138 6 0 chr2 26182657 26182838 -224505016 + AluSq SINE Alu 1 182 -131 25 0 0 0 chr2 26182942 26182967 -224504887 + AT_rich Low_complexity Low_complexity 1 25 0 1953 154 3 13 chr2 26183520 26183826 -224504028 + AluJo SINE Alu 3 305 -7 2206 101 10 10 chr2 26184295 26184603 -224503251 + AluSq SINE Alu 1 308 -5 5307 75 21 38 chr2 26184792 26185851 -224502003 + SVA Other Other 3 868 -592 6542 60 24 34 chr2 26185864 26186815 -224501039 + SVA Other Other 433 1374 -12 304 351 89 10 chr2 26187173 26187475 -224500379 - L2 LINE L2 -819 2495 2170 193 200 0 60 chr2 26187676 26187726 -224500128 + L2 LINE L2 3188 3234 -38 943 240 61 8 chr2 26187971 26188217 -224499637 - MER46C DNA MER2_type -10 328 70 594 245 51 38 chr2 26188636 26188877 -224498977 - L2 LINE L2 -34 3279 2944 1171 241 14 0 chr2 26189044 26189264 -224498590 - MER58A DNA MER1_type 0 224 2 362 333 32 0 chr2 26190048 26190141 -224497713 + MIR SINE MIR 19 114 -94 222 62 0 0 chr2 26190338 26190370 -224497484 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2338 105 3 0 chr2 26190584 26190889 -224496965 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 26191863 26191886 -224495968 + AT_rich Low_complexity Low_complexity 1 23 0 880 145 15 0 chr2 26192470 26192601 -224495253 + FLAM_A SINE Alu 1 133 0 1725 126 99 8 chr2 26192641 26192904 -224494950 + AluSx SINE Alu 1 287 -25 799 200 123 0 chr2 26193333 26193503 -224494351 + MIR SINE MIR 71 261 -1 2322 87 23 0 chr2 26193905 26194205 -224493649 - AluSx SINE Alu -5 307 1 1531 52 134 0 chr2 26194372 26194566 -224493288 + AluY SINE Alu 58 277 -34 2129 122 3 13 chr2 26194727 26195030 -224492824 + AluSx SINE Alu 1 300 -12 1121 153 144 4 chr2 26195123 26195349 -224492505 + MER44D DNA MER2_type 1 528 -81 670 164 138 0 chr2 26195349 26195465 -224492389 + MER2 DNA MER2_type 1 132 -213 2410 63 3 0 chr2 26195465 26195750 -224492104 - AluY SINE Alu -25 286 1 695 306 156 42 chr2 26196899 26197027 -224490827 - L3 LINE CR1 -140 1437 1325 2223 118 0 0 chr2 26197027 26197323 -224490531 - AluSx SINE Alu -16 296 1 695 306 156 42 chr2 26197323 26197465 -224490389 - L3 LINE CR1 -252 1325 1201 979 210 93 0 chr2 26197465 26197670 -224490184 - MER58A DNA MER1_type 0 224 1 695 306 156 42 chr2 26197670 26198111 -224489743 - L3 LINE CR1 -376 1201 644 613 133 0 51 chr2 26198161 26198259 -224489595 + AluJ/FLAM SINE Alu 3 95 -217 1972 96 62 7 chr2 26198268 26198559 -224489295 - AluSx SINE Alu -1 311 5 1932 137 40 28 chr2 26198561 26198883 -224488971 - THE1B LTR MaLR -38 326 1 820 261 70 21 chr2 26198979 26199263 -224488591 + MLT1C LTR MaLR 168 465 -2 285 299 84 9 chr2 26199282 26199389 -224488465 - L2 LINE L2 -208 3105 2991 849 191 111 36 chr2 26199447 26199672 -224488182 + L1ME3 LINE L1 5913 6154 -8 325 322 256 22 chr2 26199751 26200114 -224487740 - L2 LINE L2 -341 2973 2526 988 178 6 12 chr2 26200357 26200520 -224487334 + FRAM SINE Alu 1 158 -18 1733 170 3 7 chr2 26200643 26200937 -224486917 + AluJb SINE Alu 3 295 -17 574 204 154 43 chr2 26201537 26201699 -224486155 - MIR SINE MIR -13 249 70 2306 85 0 16 chr2 26201993 26202300 -224485554 + AluY SINE Alu 2 303 -8 1483 169 48 45 chr2 26202537 26202827 -224485027 - AluJo SINE Alu -19 293 3 2418 71 3 0 chr2 26203049 26203346 -224484508 + AluSq SINE Alu 1 298 -15 2225 83 27 7 chr2 26203351 26203652 -224484202 + AluSp SINE Alu 7 313 0 300 272 31 93 chr2 26203876 26204038 -224483816 - L2 LINE L2 -2 3311 3160 194 331 88 37 chr2 26204966 26205102 -224482752 + L3b LINE CR1 1302 1444 -139 287 232 0 0 chr2 26205258 26205314 -224482540 - L2 LINE L2 0 3272 3217 222 294 59 0 chr2 26205437 26205505 -224482349 - L2 LINE L2 -261 3052 2981 191 291 202 38 chr2 26205603 26205816 -224482038 - MIR SINE MIR -2 260 13 185 202 294 28 chr2 26207421 26207530 -224480324 - MIR SINE MIR -14 248 111 231 286 0 0 chr2 26207667 26207723 -224480131 - L2 LINE L2 -1 3312 3257 978 133 42 18 chr2 26207824 26207989 -224479865 - AluJb SINE Alu -29 283 115 2052 140 3 0 chr2 26208208 26208508 -224479346 + AluSx SINE Alu 1 301 -11 247 272 78 29 chr2 26208827 26208909 -224478945 + MIR3 SINE MIR 66 155 -53 2552 49 0 13 chr2 26208909 26209214 -224478640 + AluY SINE Alu 1 301 -10 247 272 78 29 chr2 26209214 26209234 -224478620 + MIR3 SINE MIR 155 173 -35 1597 154 60 0 chr2 26209411 26209678 -224478176 + Tigger3(Golem) DNA MER2_type 2 284 -2745 226 167 28 0 chr2 26209677 26209713 -224478141 + Tigger3(Golem) DNA MER2_type 3002 3038 0 * 24 0 0 0 chr2 26210079 26210103 -224477751 + AT_rich Low_complexity Low_complexity 1 24 0 2488 58 0 0 chr2 26210569 26210860 -224476994 - AluY SINE Alu -20 291 1 673 157 0 9 chr2 26210880 26210988 -224476866 + FLAM_C SINE Alu 27 133 -10 2192 108 3 0 chr2 26211260 26211555 -224476299 - AluSx SINE Alu -16 296 1 3554 128 39 7 chr2 26212544 26213115 -224474739 - LTR38B LTR ERV1 0 610 22 183 42 0 0 chr2 26213119 26213143 -224474711 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 573 143 0 22 chr2 26213145 26213236 -224474618 - FRAM SINE Alu -19 157 69 881 200 47 147 chr2 26213312 26213450 -224474404 - L1MC4 LINE L1 -881 6927 6777 339 221 0 12 chr2 26213450 26213536 -224474318 - L1MA10 LINE L1 -15 6319 6235 881 200 47 147 chr2 26213536 26213559 -224474295 - L1MC4 LINE L1 -1031 6777 6753 2228 114 0 10 chr2 26213559 26213867 -224473987 - AluSq SINE Alu -8 305 1 881 200 47 147 chr2 26213867 26214020 -224473834 - L1MC4 LINE L1 -1055 6753 6701 1837 161 3 20 chr2 26214020 26214325 -224473529 + AluSx SINE Alu 1 300 -12 881 200 47 147 chr2 26214325 26214476 -224473378 - L1MC4 LINE L1 -1107 6701 6536 182 33 67 0 chr2 26216093 26216123 -224471731 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr2 26217270 26217302 -224470552 + AT_rich Low_complexity Low_complexity 1 32 0 1970 148 10 0 chr2 26218453 26218750 -224469104 - AluJo SINE Alu -8 304 5 814 112 0 17 chr2 26220751 26220867 -224466987 + FLAM_C SINE Alu 26 139 -4 335 301 68 90 chr2 26221619 26221790 -224466064 - L2 LINE L2 -143 3129 2967 2394 68 13 13 chr2 26221790 26222101 -224465753 + AluSp SINE Alu 1 311 -2 335 301 68 90 chr2 26222101 26222251 -224465603 - L2 LINE L2 -305 2967 2815 198 286 36 0 chr2 26222256 26222312 -224465542 - L3 LINE CR1 -179 1398 1341 221 351 40 20 chr2 26222373 26222524 -224465330 - L3 LINE CR1 -330 1247 1094 2169 102 3 43 chr2 26223464 26223786 -224464068 - AluY SINE Alu -2 309 1 2430 82 0 0 chr2 26224462 26224767 -224463087 + AluY SINE Alu 1 305 -6 2230 112 0 13 chr2 26225683 26225986 -224461868 - AluSx SINE Alu -13 299 1 22 70 0 0 chr2 26226347 26226390 -224461464 + AT_rich Low_complexity Low_complexity 1 43 0 2095 141 6 10 chr2 26226944 26227257 -224460597 - AluSx SINE Alu 0 312 1 367 239 90 8 chr2 26227324 26227458 -224460396 - L1ME4a LINE L1 0 6121 5977 2279 100 0 10 chr2 26227715 26228025 -224459829 - AluSx SINE Alu -5 307 1 183 42 0 0 chr2 26228027 26228051 -224459803 + (T)n Simple_repeat Simple_repeat 1 24 0 2244 100 3 0 chr2 26228258 26228548 -224459306 + AluSx SINE Alu 1 291 -21 784 113 81 124 chr2 26229072 26229258 -224458596 - MER20 DNA MER1_type 0 219 42 1652 186 16 16 chr2 26229321 26229633 -224458221 + AluJb SINE Alu 1 312 0 2050 135 3 0 chr2 26229764 26230060 -224457794 + AluJb SINE Alu 2 298 -14 2426 68 10 0 chr2 26230305 26230612 -224457242 + AluY SINE Alu 1 310 -1 498 232 14 56 chr2 26230665 26230807 -224457047 + MIR SINE MIR 4 139 -123 321 208 0 0 chr2 26230942 26231019 -224456835 + (TA)n Simple_repeat Simple_repeat 2 78 0 422 283 151 0 chr2 26231026 26231192 -224456662 - MIR SINE MIR -71 191 1 2299 117 0 0 chr2 26231947 26232256 -224455598 - AluSx SINE Alu -3 309 1 1057 250 133 42 chr2 26232679 26232985 -224454869 + L1ME LINE L1 4974 5251 -919 2372 75 0 7 chr2 26232985 26233280 -224454574 + AluSg SINE Alu 1 293 -17 1057 250 133 42 chr2 26233280 26233516 -224454338 + L1ME LINE L1 5251 5464 -706 2080 65 69 0 chr2 26233516 26233791 -224454063 + AluY SINE Alu 1 294 -17 1057 250 133 42 chr2 26233791 26233937 -224453917 + L1ME LINE L1 5464 5723 -447 255 140 0 40 chr2 26234041 26234091 -224453763 + L1MD3 LINE L1 7063 7110 -885 446 152 33 43 chr2 26234098 26234190 -224453664 + MLT1F1 LTR MaLR 35 125 -442 2211 157 47 15 chr2 26234190 26234599 -224453255 + L1MD3 LINE L1 7404 7825 -170 1996 102 0 37 chr2 26234676 26234971 -224452883 - AluSx SINE Alu -28 284 1 1976 124 11 7 chr2 26235486 26235789 -224452065 + AluSq SINE Alu 1 304 0 2236 118 0 7 chr2 26236533 26236838 -224451016 + AluSx SINE Alu 1 303 -9 1016 150 7 0 chr2 26237593 26237746 -224450108 - MER7A DNA MER2_type -1 335 182 1994 136 16 19 chr2 26237748 26238070 -224449784 - MER1B DNA MER1_type 0 339 4 844 181 110 16 chr2 26238072 26238254 -224449600 - MER7A DNA MER2_type -149 197 1 193 354 0 0 chr2 26238264 26238312 -224449542 + L2 LINE L2 3210 3257 -15 2273 107 0 0 chr2 26238650 26238950 -224448904 + AluSq SINE Alu 6 305 -8 1900 55 0 0 chr2 26239409 26239629 -224448225 + AluY SINE Alu 79 298 -13 2193 125 0 0 chr2 26239873 26240178 -224447676 + AluSx SINE Alu 1 305 -7 405 271 59 27 chr2 26240896 26241177 -224446677 - L1ME3 LINE L1 -225 5939 5651 467 122 0 12 chr2 26241186 26241268 -224446586 + (TG)n Simple_repeat Simple_repeat 2 82 0 2119 112 21 0 chr2 26241274 26241561 -224446293 - AluSx SINE Alu -19 293 1 406 224 128 66 chr2 26242088 26242191 -224445663 + L1ME4a LINE L1 5797 5892 -229 1873 161 0 7 chr2 26242191 26242483 -224445371 + AluJb SINE Alu 1 290 -22 406 224 128 66 chr2 26242483 26242683 -224445171 + L1ME4a LINE L1 5892 6119 -2 1803 170 13 10 chr2 26242850 26243150 -224444704 - AluJo SINE Alu -11 301 1 599 222 89 22 chr2 26244187 26244367 -224443487 + MLT1D LTR MaLR 12 203 -302 207 318 45 0 chr2 26244683 26244749 -224443105 + MIR SINE MIR 38 106 -102 21 0 0 0 chr2 26244978 26244999 -224442855 + AT_rich Low_complexity Low_complexity 1 21 0 531 150 15 105 chr2 26245073 26245206 -224442648 - L2 LINE L2 -2 3311 3191 706 144 117 0 chr2 26245502 26245613 -224442241 - FLAM_A SINE Alu -6 127 4 1986 90 6 99 chr2 26246184 26246529 -224441325 + AluSq SINE Alu 1 313 0 1670 141 100 4 chr2 26246766 26247035 -224440819 - AluSx SINE Alu -17 295 1 536 186 219 11 chr2 26247413 26247596 -224440258 - MIR SINE MIR -10 252 32 2385 48 41 0 chr2 26247601 26247896 -224439958 - AluY SINE Alu -4 307 1 352 230 186 0 chr2 26247950 26248063 -224439791 - MIR3 SINE MIR -45 163 30 2226 91 14 11 chr2 26299415 26299700 -224388154 - AluSx SINE Alu -6 306 21 342 267 213 20 chr2 26299834 26300036 -224387818 - L1ME LINE L1 -390 5731 5491 2370 74 0 3 chr2 26301966 26302251 -224385603 - AluSx SINE Alu -28 284 1 228 266 138 21 chr2 26302570 26302664 -224385190 + L2 LINE L2 3168 3272 0 830 268 45 23 chr2 26302732 26303042 -224384812 + L1MC5 LINE L1 7603 7919 -42 557 252 60 7 chr2 26306131 26306282 -224381572 + MIR SINE MIR 4 162 -100 2041 127 6 29 chr2 26306359 26306673 -224381181 - AluSx SINE Alu -5 307 1 680 231 72 0 chr2 26306843 26307038 -224380816 - L1ME2 LINE L1 0 6164 5956 5098 187 90 128 chr2 26307141 26307282 -224380572 - L1ME2 LINE L1 -437 5727 5582 2277 112 0 13 chr2 26307282 26307596 -224380258 + AluY SINE Alu 1 310 -1 5098 187 90 128 chr2 26307596 26308461 -224379393 - L1ME2 LINE L1 -582 5582 4686 1424 146 29 0 chr2 26308461 26308701 -224379153 - Tigger2 DNA MER2_type -1 2717 2471 2461 92 0 0 chr2 26308705 26309008 -224378846 + AluSq SINE Alu 1 303 -10 5098 187 90 128 chr2 26309008 26310080 -224377774 - L1ME2 LINE L1 -1481 4683 3572 2366 95 0 16 chr2 26310080 26310385 -224377469 + AluSx SINE Alu 1 300 -12 5098 187 90 128 chr2 26310385 26310845 -224377009 - L1ME2 LINE L1 -2592 3572 3073 1748 147 19 13 chr2 26310845 26311087 -224376767 - L1MB7 LINE L1 -16 6168 5922 2002 152 36 0 chr2 26311087 26311423 -224376431 + MER7A DNA MER2_type 1 346 0 1748 147 19 13 chr2 26311423 26311493 -224376361 - L1MB7 LINE L1 -262 5922 5854 5098 187 90 128 chr2 26311493 26311823 -224376031 - L1ME2 LINE L1 -3091 3073 2732 2247 89 4 0 chr2 26314927 26315242 -224372612 + AluSq SINE Alu 4 319 0 395 267 14 69 chr2 26317411 26317611 -224370243 + MIR SINE MIR 21 203 -58 405 48 0 114 chr2 26317835 26318002 -224369852 + (CTGGGG)n Simple_repeat Simple_repeat 1 148 0 189 189 38 19 chr2 26318358 26318411 -224369443 - MIR SINE MIR -60 148 95 511 152 0 0 chr2 26319504 26319583 -224368271 - AluJ/FLAM SINE Alu -232 80 2 240 254 30 0 chr2 26319978 26320045 -224367809 - L3 LINE CR1 -1 1576 1508 347 310 4 66 chr2 26320262 26320504 -224367350 + L2 LINE L2 2817 3043 -229 2324 77 24 7 chr2 26320892 26321190 -224366664 - AluSg SINE Alu -7 303 1 1491 122 68 9 chr2 26322693 26322915 -224364939 - AluJb SINE Alu -17 295 61 408 215 0 0 chr2 26323021 26323128 -224364726 + (CCCA)n Simple_repeat Simple_repeat 4 110 0 262 336 16 0 chr2 26323146 26323271 -224364583 + (TCCA)n Simple_repeat Simple_repeat 2 128 0 243 289 57 99 chr2 26323757 26324246 -224363608 - L2 LINE L2 -47 3225 2725 315 329 100 7 chr2 26325095 26325235 -224362619 + MER117 DNA MER1_type 15 167 -30 268 387 45 10 chr2 26325331 26325530 -224362324 - MIR SINE MIR -50 212 7 546 246 0 0 chr2 26326031 26326633 -224361221 + (CA)n Simple_repeat Simple_repeat 1 602 0 2205 82 0 0 chr2 26327417 26327726 -224360128 - AluSg SINE Alu 0 309 1 2140 99 10 10 chr2 26327737 26328049 -224359805 - AluSx SINE Alu 0 312 1 2563 216 44 93 chr2 26328049 26328479 -224359375 + L1MC5 LINE L1 6291 6741 -1220 1613 147 49 3 chr2 26328479 26328764 -224359090 + AluJb SINE Alu 7 304 -8 2563 216 44 93 chr2 26328764 26328901 -224358953 + L1MC5 LINE L1 6741 6883 -1078 1975 113 0 3 chr2 26328901 26329209 -224358645 + AluSc SINE Alu 1 307 0 2563 216 44 93 chr2 26329209 26329763 -224358091 + L1MC5 LINE L1 6883 7376 -585 204 292 15 0 chr2 26329830 26329895 -224357959 + MIR3 SINE MIR 132 197 -11 231 146 0 0 chr2 26331133 26331174 -224356680 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 317 281 105 18 chr2 26332156 26332270 -224355584 - L2 LINE L2 -998 2316 2193 1184 207 77 65 chr2 26332560 26332913 -224354941 + MLT1A1 LTR MaLR 1 357 -8 257 226 0 0 chr2 26333701 26333754 -224354100 + GA-rich Low_complexity Low_complexity 3 55 0 665 280 20 4 chr2 26333799 26334004 -224353850 + L1MC4a LINE L1 5668 5797 -547 273 29 0 0 chr2 26334511 26334545 -224353309 + (CA)n Simple_repeat Simple_repeat 2 35 0 351 266 23 121 chr2 26334720 26334936 -224352918 + L1MC4 LINE L1 1872 6984 -1338 521 339 114 28 chr2 26335352 26335936 -224351918 - L2 LINE L2 0 3272 2640 400 242 19 12 chr2 26337147 26337308 -224350546 + (TG)n Simple_repeat Simple_repeat 1 162 0 299 326 11 11 chr2 26337310 26337399 -224350455 + (CGTG)n Simple_repeat Simple_repeat 3 91 0 216 258 31 0 chr2 26337408 26337505 -224350349 + (TG)n Simple_repeat Simple_repeat 1 100 0 274 138 17 35 chr2 26337559 26337617 -224350237 + MER4-int LTR ERV1 1111 1167 -5431 424 316 23 0 chr2 26337617 26337750 -224350104 + (TG)n Simple_repeat Simple_repeat 1 136 0 225 94 0 0 chr2 26338740 26338772 -224349082 + (GAA)n Simple_repeat Simple_repeat 3 34 0 422 311 160 9 chr2 26339077 26339296 -224348558 - L2 LINE L2 0 3272 3021 748 287 111 23 chr2 26339675 26340080 -224347774 - MLT1J LTR MaLR -21 429 8 2954 74 0 5 chr2 26340390 26340770 -224347084 - L1PA5 LINE L1 0 6154 5777 288 219 94 0 chr2 26341277 26341341 -224346513 - MIR3 SINE MIR -6 202 133 474 253 82 0 chr2 26341393 26341539 -224346315 + MER103 DNA DNA 8 165 -1 243 280 125 31 chr2 26341758 26341934 -224345920 - MIR3 SINE MIR -55 207 11 2233 111 0 0 chr2 26342820 26343126 -224344728 + AluSx SINE Alu 1 306 -6 412 296 9 0 chr2 26343144 26343252 -224344602 - MIR3 SINE MIR -22 186 78 471 183 96 26 chr2 26344037 26344152 -224343702 + MIR3 SINE MIR 11 133 -75 321 297 35 34 chr2 26344816 26344976 -224342878 - MIR SINE MIR -63 145 16 335 152 25 25 chr2 26345173 26345252 -224342602 + MIR3 SINE MIR 85 163 -45 282 238 9 29 chr2 26346272 26346377 -224341477 + (CA)n Simple_repeat Simple_repeat 2 104 0 466 239 71 0 chr2 26346685 26346798 -224341056 + MER45A DNA AcHobo 58 178 0 214 214 0 0 chr2 26348123 26348165 -224339689 + MIR SINE MIR 106 147 -115 409 303 119 41 chr2 26353481 26353894 -224333960 + L2 LINE L2 2524 2968 -346 249 230 35 58 chr2 26353984 26354071 -224333783 + L2 LINE L2 3186 3270 -2 231 329 0 0 chr2 26354366 26354445 -224333409 + CT-rich Low_complexity Low_complexity 1 79 0 1473 281 43 45 chr2 26354968 26355310 -224332544 - L1MC4a LINE L1 -747 5399 5622 1915 98 0 15 chr2 26355310 26355576 -224332278 + AluSx SINE Alu 38 299 -13 1473 281 43 45 chr2 26355576 26356093 -224331761 - L1MC4a LINE L1 -523 5623 5106 807 178 0 84 chr2 26356111 26356302 -224331552 - AluJb SINE Alu -1 311 137 2508 60 3 0 chr2 26356787 26357102 -224330752 + L1PA7 LINE L1 5838 6153 -1 501 248 0 0 chr2 26358877 26359106 -224328748 + (TGGA)n Simple_repeat Simple_repeat 1 229 0 460 331 199 9 chr2 26359132 26359458 -224328396 + L3 LINE CR1 1184 1571 -6 426 318 98 0 chr2 26360060 26360233 -224327621 + MIR SINE MIR 47 236 -26 318 295 95 0 chr2 26360601 26360706 -224327148 + MIR3 SINE MIR 93 207 -1 252 301 49 24 chr2 26360820 26360943 -224326911 + MIR SINE MIR 72 197 -65 467 300 29 53 chr2 26362124 26362294 -224325560 + MER91A DNA MER1_type 31 196 0 594 235 54 12 chr2 26362672 26362838 -224325016 + MIR SINE MIR 20 192 -70 279 351 97 12 chr2 26362847 26363012 -224324842 - MER104 DNA Tc2 -1 179 1 303 327 187 2 chr2 26363580 26364057 -224323797 - L2 LINE L2 -1037 2277 1713 997 143 122 15 chr2 26364808 26365004 -224322850 + MER20 DNA MER1_type 2 218 -1 205 371 60 18 chr2 26365351 26365518 -224322336 - L2 LINE L2 -107 3165 2992 459 288 49 18 chr2 26366737 26366900 -224320954 + MIR3 SINE MIR 23 190 -18 288 294 89 41 chr2 26367806 26367952 -224319902 + MIR3 SINE MIR 18 170 -38 373 181 39 102 chr2 26367991 26368074 -224319780 + MER5B DNA MER1_type 39 113 -65 1980 127 7 3 chr2 26368074 26368366 -224319488 - AluSx SINE Alu -17 295 3 373 181 39 102 chr2 26368366 26368409 -224319445 + MER5B DNA MER1_type 113 157 -21 228 208 21 0 chr2 26368777 26368825 -224319029 - L2 LINE L2 -1 3271 3223 2001 119 0 20 chr2 26368880 26369182 -224318672 - AluSx SINE Alu -16 296 1 201 39 0 0 chr2 26369218 26369244 -224318610 + (GA)n Simple_repeat Simple_repeat 2 27 0 222 285 174 35 chr2 26369391 26369535 -224318319 + MIR SINE MIR 47 210 -52 2150 96 20 0 chr2 26369733 26370036 -224317818 - AluSg SINE Alu 0 310 2 290 350 36 21 chr2 26371513 26371707 -224316147 - L2 LINE L2 -581 2733 2537 1078 150 0 0 chr2 26372140 26372307 -224315547 - AluSg/x SINE Alu -2 310 144 400 257 88 47 chr2 26372428 26372599 -224315255 + MIR SINE MIR 72 249 -13 279 209 70 43 chr2 26373462 26373577 -224314277 - L1ME4a LINE L1 0 6121 6004 252 327 77 12 chr2 26374109 26374277 -224313577 + L3 LINE CR1 1190 1368 -209 334 304 105 29 chr2 26374992 26375163 -224312691 - MIR SINE MIR -3 259 76 351 44 0 0 chr2 26377659 26377704 -224310150 + (CA)n Simple_repeat Simple_repeat 2 46 0 418 291 64 22 chr2 26377755 26377958 -224309896 - MIR SINE MIR -56 206 3 2123 96 34 0 chr2 26378964 26379257 -224308597 + AluSx SINE Alu 1 303 -9 409 347 94 36 chr2 26380880 26381157 -224306697 - L3b LINE CR1 -154 1429 1137 216 268 52 62 chr2 26381215 26381312 -224306542 - L2 LINE L2 -458 2856 2761 236 277 119 20 chr2 26381554 26381655 -224306199 + L2 LINE L2 2906 3016 -256 226 289 12 54 chr2 26381931 26382092 -224305762 + MIR SINE MIR 91 241 -21 225 359 86 0 chr2 26385051 26385168 -224302686 - MIR SINE MIR -10 252 126 243 262 128 74 chr2 26386872 26387021 -224300833 - MIR3 SINE MIR -14 194 38 332 268 116 9 chr2 26387387 26387499 -224300355 - MIR SINE MIR -110 152 29 192 77 0 0 chr2 26387649 26387675 -224300179 + (TG)n Simple_repeat Simple_repeat 1 26 0 216 220 80 0 chr2 26388988 26389038 -224298816 - MIR SINE MIR -62 146 93 490 297 195 5 chr2 26389648 26389843 -224298011 - MIR SINE MIR -11 251 20 182 286 80 114 chr2 26389905 26390080 -224297774 + MIR3 SINE MIR 33 201 -7 447 248 252 9 chr2 26390463 26390673 -224297181 - MIR SINE MIR 0 262 2 537 289 49 36 chr2 26391898 26392123 -224295731 + MIR SINE MIR 15 242 -20 187 300 146 9 chr2 26392157 26392267 -224295587 + L2 LINE L2 3147 3271 -1 325 239 150 9 chr2 26392466 26392579 -224295275 - MIR3 SINE MIR -19 189 61 402 134 15 0 chr2 26393098 26393165 -224294689 - MER5A DNA MER1_type 0 189 122 506 250 86 8 chr2 26393177 26393305 -224294549 + MER63 DNA MER1_type 3 766 -296 599 153 42 0 chr2 26393335 26393453 -224294401 - MER5A DNA MER1_type -66 123 1 186 279 70 0 chr2 26393840 26393926 -224293928 - L3 LINE CR1 -49 1528 1437 355 231 67 10 chr2 26395039 26395143 -224292711 + MIR SINE MIR 20 129 -79 234 238 48 16 chr2 26396024 26396087 -224291767 - L2 LINE L2 0 3313 3249 1865 164 0 3 chr2 26396566 26396871 -224290983 + AluSx SINE Alu 1 304 -8 348 338 86 0 chr2 26397105 26397256 -224290598 + MIR3 SINE MIR 36 199 -9 359 280 175 7 chr2 26397616 26397759 -224290095 - L3 LINE CR1 -1 1576 1410 336 260 0 39 chr2 26397882 26397986 -224289868 + L2 LINE L2 3170 3269 -3 712 164 6 22 chr2 26398004 26398145 -224289709 + (TGGA)n Simple_repeat Simple_repeat 1 140 -40 2173 119 0 0 chr2 26398145 26398457 -224289397 + AluSx SINE Alu 1 312 0 712 164 6 22 chr2 26398457 26398498 -224289356 + (TGGA)n Simple_repeat Simple_repeat 140 180 0 446 153 0 10 chr2 26398530 26398628 -224289226 + (TGGA)n Simple_repeat Simple_repeat 1 97 0 219 343 37 9 chr2 26398770 26398878 -224288976 - L3 LINE CR1 -606 971 861 687 205 0 0 chr2 26398891 26399008 -224288846 - FLAM_A SINE Alu -15 127 11 375 254 153 25 chr2 26399153 26399271 -224288583 + L2 LINE L2 3181 3313 0 473 265 80 13 chr2 26399278 26399429 -224288425 - MIR SINE MIR -67 195 35 293 345 120 7 chr2 26400103 26400245 -224287609 - MIR SINE MIR -70 192 35 256 369 56 12 chr2 26401390 26401550 -224286304 - MIR SINE MIR 0 262 96 224 140 40 0 chr2 26402734 26402784 -224285070 + (TCTCTG)n Simple_repeat Simple_repeat 4 55 0 397 271 68 8 chr2 26402788 26402906 -224284948 + MER5B DNA MER1_type 1 125 -53 434 271 206 32 chr2 26403327 26403482 -224284372 + MIR SINE MIR 24 205 -57 2078 131 3 0 chr2 26403843 26404149 -224283705 + AluSx SINE Alu 1 307 -5 328 274 104 0 chr2 26404255 26404361 -224283493 - MIR SINE MIR -63 145 29 281 224 0 45 chr2 26404496 26404563 -224283291 - L2 LINE L2 -14 3258 3195 2178 151 0 20 chr2 26405004 26405348 -224282506 + MER1B DNA MER1_type 1 337 0 260 82 0 41 chr2 26405450 26405499 -224282355 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 368 192 26 13 chr2 26405558 26405636 -224282218 + MIR3 SINE MIR 91 169 -39 224 247 247 10 chr2 26405817 26405914 -224281940 - L2 LINE L2 0 3272 3153 209 247 65 13 chr2 26406028 26406105 -224281749 + L2 LINE L2 3122 3202 -70 186 234 31 47 chr2 26406192 26406256 -224281598 + MIR SINE MIR 187 249 -13 208 333 10 62 chr2 26406685 26406781 -224281073 - MIR SINE MIR -66 196 106 232 253 48 12 chr2 26407281 26407364 -224280490 + MIR SINE MIR 45 130 -132 372 224 82 10 chr2 26407468 26407566 -224280288 - MER20B DNA MER1_type -622 161 57 218 302 34 54 chr2 26410676 26410825 -224277029 - L2 LINE L2 -1 3271 3126 1975 77 8 0 chr2 26410849 26411108 -224276746 - AluSx SINE Alu -14 298 38 2059 119 7 0 chr2 26411208 26411503 -224276351 - AluSx SINE Alu -15 297 1 491 234 32 8 chr2 26411535 26411659 -224276195 - Charlie4 DNA MER1_type -1678 283 157 487 296 0 22 chr2 26412264 26412399 -224275455 + MIR3 SINE MIR 30 161 -47 215 244 0 0 chr2 26412579 26412624 -224275230 + MIR3 SINE MIR 157 201 -7 1100 116 11 28 chr2 26414417 26414598 -224273256 + AluSg/x SINE Alu 117 294 -18 725 126 0 10 chr2 26414598 26414701 -224273153 - AluJo/FLAM SINE Alu -194 118 17 205 333 0 13 chr2 26414899 26414974 -224272880 - MIR SINE MIR -86 122 49 518 302 36 40 chr2 26415305 26415340 -224272514 - L1MC4a LINE L1 -1879 5929 5895 1765 174 0 19 chr2 26415340 26415650 -224272204 - AluJo SINE Alu -8 304 1 518 302 36 40 chr2 26415650 26415836 -224272018 - L1MC4a LINE L1 -1913 5895 5709 439 249 90 26 chr2 26416012 26416201 -224271653 - L1MC4a LINE L1 -2184 5624 5424 1095 195 27 14 chr2 26416210 26416431 -224271423 - AluJb SINE Alu -88 224 1 836 206 38 0 chr2 26416436 26416620 -224271234 - AluJo SINE Alu -1 311 121 261 305 45 32 chr2 26416620 26416743 -224271111 - L1MC4a LINE L1 -2397 5411 5284 2176 129 2 104 chr2 26416743 26417106 -224270748 - L1MB8 LINE L1 0 6178 5864 1529 167 29 4 chr2 26417106 26417413 -224270441 + AluSx SINE Alu 1 314 0 2176 129 2 104 chr2 26417413 26417490 -224270364 - L1MB8 LINE L1 -314 5864 5781 261 305 45 32 chr2 26417490 26417520 -224270334 - L1MC4a LINE L1 -2524 5284 5256 247 288 11 79 chr2 26417651 26417777 -224270077 - L1P LINE L1 -1074 5072 4960 2125 95 3 30 chr2 26417777 26418082 -224269772 - AluSx SINE Alu -15 297 1 247 288 11 79 chr2 26418082 26418132 -224269722 - L1P LINE L1 -1186 4960 4908 243 249 43 155 chr2 26418293 26418375 -224269479 - L1MC5 LINE L1 -48 7913 7823 2189 113 3 0 chr2 26418375 26418684 -224269170 + AluSx SINE Alu 1 310 -2 243 249 43 155 chr2 26418684 26418755 -224269099 - L1MC5 LINE L1 -138 7823 7746 6412 112 6 44 chr2 26418755 26419762 -224268092 + LTR5 LTR ERVK 1 969 0 243 249 43 155 chr2 26419762 26419786 -224268068 - L1MC5 LINE L1 -215 7746 7721 1574 162 3 55 chr2 26419786 26420113 -224267741 - AluJb SINE Alu -2 310 1 243 249 43 155 chr2 26420113 26420210 -224267644 - L1MC5 LINE L1 -240 7721 7668 2224 181 116 13 chr2 26420212 26420670 -224267184 + MLT1D LTR MaLR 1 505 0 1901 118 42 7 chr2 26420738 26421026 -224266828 - AluJb SINE Alu -14 298 1 295 252 68 0 chr2 26421175 26421278 -224266576 + MIR3 SINE MIR 62 171 -37 797 169 0 0 chr2 26421394 26421512 -224266342 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 26421512 26421552 -224266302 + AT_rich Low_complexity Low_complexity 1 40 0 607 207 45 34 chr2 26421778 26421861 -224265993 + MER53 DNA DNA 2 83 -106 3226 113 20 73 chr2 26421861 26422012 -224265842 - LTR26B LTR ERV1 -1 530 372 1647 155 33 7 chr2 26422012 26422315 -224265539 - AluJo SINE Alu -1 311 1 3226 113 20 73 chr2 26422315 26422535 -224265319 - LTR26B LTR ERV1 -159 372 196 1652 152 33 7 chr2 26422535 26422811 -224265043 - AluJb SINE Alu -9 303 21 3226 113 20 73 chr2 26422811 26422998 -224264856 - LTR26B LTR ERV1 -335 196 1 607 207 45 34 chr2 26422998 26423093 -224264761 + MER53 DNA DNA 83 182 -7 2021 142 0 0 chr2 26423165 26423460 -224264394 + AluSx SINE Alu 1 295 -17 1843 124 34 24 chr2 26423552 26423850 -224264004 + AluSx SINE Alu 12 312 0 252 289 59 19 chr2 26424687 26424794 -224263060 - MIR SINE MIR -65 143 51 2273 75 20 0 chr2 26425059 26425351 -224262503 + AluSx SINE Alu 3 300 -12 1857 100 100 14 chr2 26425709 26425939 -224261915 + LTR24C LTR ERV1 1 276 -359 2207 99 3 3 chr2 26425939 26426233 -224261621 - AluSx SINE Alu -18 294 1 1857 100 100 14 chr2 26426233 26426373 -224261481 + LTR24C LTR ERV1 276 403 -232 2921 158 73 8 chr2 26426516 26427035 -224260819 - MER41A LTR ERV1 0 554 2 214 264 92 0 chr2 26427232 26427319 -224260535 + L2 LINE L2 2939 3033 -239 214 316 94 8 chr2 26427539 26427656 -224260198 + L2 LINE L2 3182 3308 -5 263 114 0 2 chr2 26428073 26428309 -224259545 + AluSx SINE Alu 1 294 -8 252 293 57 57 chr2 26428404 26428544 -224259310 + L2 LINE L2 2910 3049 -223 1526 177 30 7 chr2 26428709 26428980 -224258874 - AluJo SINE Alu -29 283 7 2020 135 0 7 chr2 26429020 26429316 -224258538 + AluSx SINE Alu 3 296 -16 2117 148 45 5 chr2 26429323 26429742 -224258112 - LTR56 LTR ERV1 -2 443 8 4310 113 29 0 chr2 26429807 26430424 -224257430 + MER41B LTR ERV1 1 635 0 2011 102 7 7 chr2 26430535 26430818 -224257036 - AluSp SINE Alu -30 283 1 1709 197 3 3 chr2 26430818 26431118 -224256736 - AluSx SINE Alu -12 300 1 1916 80 9 49 chr2 26431148 26431427 -224256427 + MER4E LTR ERV1 1 267 -512 2074 83 31 14 chr2 26431427 26431717 -224256137 + AluSg SINE Alu 1 295 -15 1916 80 9 49 chr2 26431717 26431763 -224256091 + MER4E LTR ERV1 267 313 -466 1415 70 74 0 chr2 26431774 26431989 -224255865 + MER4E LTR ERV1 536 766 0 299 345 43 22 chr2 26432078 26432217 -224255637 + MIR3 SINE MIR 2 143 -65 2268 97 0 3 chr2 26432520 26432831 -224255023 + AluSx SINE Alu 1 310 -2 229 243 129 0 chr2 26433956 26434026 -224253828 - L2 LINE L2 -842 2472 2394 281 54 0 0 chr2 26434216 26434253 -224253601 - AluSp/q SINE Alu -35 268 232 202 320 57 66 chr2 26434253 26434375 -224253479 - L2 LINE L2 -37 3235 3115 2146 120 3 0 chr2 26435044 26435345 -224252509 + AluSx SINE Alu 1 302 -10 734 289 44 18 chr2 26435427 26435652 -224252202 - MIR SINE MIR -20 242 12 329 302 134 13 chr2 26435696 26435845 -224252009 - MIR3 SINE MIR -21 187 21 755 137 32 8 chr2 26436455 26436579 -224251275 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 26436579 26436600 -224251254 + AT_rich Low_complexity Low_complexity 1 21 0 324 221 117 0 chr2 26436978 26437055 -224250799 + MIR3 SINE MIR 93 178 -30 2076 98 27 10 chr2 26437086 26437383 -224250471 - AluY SINE Alu -9 302 1 1755 150 49 0 chr2 26437383 26437669 -224250185 - AluJo SINE Alu -12 300 1 1849 170 0 7 chr2 26438849 26439155 -224248699 + AluJb SINE Alu 1 304 -8 2036 153 0 0 chr2 26439162 26439470 -224248384 + AluSx SINE Alu 1 308 -4 27 0 0 0 chr2 26440043 26440070 -224247784 + AT_rich Low_complexity Low_complexity 1 27 0 887 146 0 0 chr2 26440416 26440546 -224247308 + FLAM_A SINE Alu 4 133 0 438 346 257 10 chr2 26441100 26441493 -224246361 + L3 LINE CR1 803 1292 -285 300 381 19 12 chr2 26441567 26441727 -224246127 + MER117 DNA MER1_type 33 193 -4 738 182 6 50 chr2 26441835 26441945 -224245909 - Charlie4 DNA MER1_type 0 1961 1861 2228 76 10 10 chr2 26441945 26442248 -224245606 + AluY SINE Alu 1 303 -8 738 182 6 50 chr2 26442248 26442318 -224245536 - Charlie4 DNA MER1_type -100 1861 1789 337 281 8 11 chr2 26443085 26443213 -224244641 - MIR SINE MIR -79 183 17 502 318 112 33 chr2 26444713 26445134 -224242720 + L2 LINE L2 2819 3272 0 261 98 0 0 chr2 26445995 26446036 -224241818 + (TG)n Simple_repeat Simple_repeat 1 41 0 2190 122 0 0 chr2 26447776 26448079 -224239775 - AluSx SINE Alu -9 303 1 276 149 0 0 chr2 26449184 26449231 -224238623 + (CACG)n Simple_repeat Simple_repeat 4 50 0 213 299 23 69 chr2 26451200 26451287 -224236567 - L2 LINE L2 -1 3271 3189 410 279 95 0 chr2 26451983 26452141 -224235713 - MIR3 SINE MIR -3 205 33 229 154 0 0 chr2 26452165 26452204 -224235650 - L2 LINE L2 -24 3248 3210 498 108 0 0 chr2 26452216 26452290 -224235564 + (TTCTCC)n Simple_repeat Simple_repeat 6 79 0 2195 95 7 3 chr2 26452295 26452589 -224235265 - AluSx SINE Alu -17 295 1 570 244 131 0 chr2 26452778 26452946 -224234908 + MIR SINE MIR 19 208 -54 1703 244 32 30 chr2 26453627 26453922 -224233932 + MER63B DNA MER1_type 1 299 -763 1792 156 50 0 chr2 26453922 26454204 -224233650 - AluJo SINE Alu -16 296 1 1703 244 32 30 chr2 26454204 26454343 -224233511 + MER63B DNA MER1_type 299 436 0 2399 122 27 11 chr2 26454353 26454722 -224233132 + THE1C LTR MaLR 1 375 0 510 268 35 0 chr2 26454951 26455093 -224232761 - MER5B DNA MER1_type -25 153 7 2126 107 43 0 chr2 26455945 26456244 -224231610 + AluSx SINE Alu 1 312 0 211 296 0 0 chr2 26457599 26457643 -224230211 - L2 LINE L2 -6 3266 3223 197 318 139 0 chr2 26457753 26457882 -224229972 - L2 LINE L2 -212 3060 2914 231 313 16 0 chr2 26458731 26458795 -224229059 + L2 LINE L2 3201 3265 -7 387 265 5 0 chr2 26458810 26458930 -224228924 - HAL1b LINE L1 -44 6077 1194 312 48 0 0 chr2 26458930 26458972 -224228882 - 5S rRNA rRNA -79 42 1 1906 275 37 36 chr2 26459027 26459758 -224228096 - HAL1b LINE L1 -170 1178 447 486 328 238 12 chr2 26461561 26462146 -224225708 - L2 LINE L2 -784 2530 1814 189 303 172 20 chr2 26462556 26462655 -224225199 - MIR3 SINE MIR -2 206 93 798 160 0 15 chr2 26462885 26463016 -224224838 - FLAM_C SINE Alu -10 133 5 185 337 47 12 chr2 26464452 26464538 -224223316 - MIR SINE MIR -66 196 108 189 362 0 29 chr2 26465682 26465787 -224222067 - MIR SINE MIR -64 144 43 263 333 14 16 chr2 26466106 26466319 -224221535 - MIR SINE MIR -7 255 1 650 298 17 6 chr2 26467098 26467279 -224220575 - MIR SINE MIR -71 191 9 203 360 72 14 chr2 26468803 26468942 -224218912 + L3 LINE CR1 1164 1310 -267 452 273 197 10 chr2 26471284 26471482 -224216372 - MIR SINE MIR 0 262 28 324 241 36 45 chr2 26471558 26471670 -224216184 + MIR3 SINE MIR 3 113 -95 239 174 58 93 chr2 26472742 26472828 -224215026 - MIR SINE MIR 0 262 180 1028 265 155 28 chr2 26472871 26473826 -224214028 + L2 LINE L2 2169 3311 -2 298 250 33 43 chr2 26473828 26473920 -224213934 - MIR SINE MIR -158 104 14 636 251 18 0 chr2 26473937 26474100 -224213754 + MLT1J LTR MaLR 54 219 -292 2406 52 3 0 chr2 26474237 26474528 -224213326 + AluY SINE Alu 17 308 -3 449 236 79 89 chr2 26474603 26474806 -224213048 + MIR SINE MIR 58 258 -4 195 219 219 14 chr2 26475061 26475134 -224212720 - MIR SINE MIR -63 145 58 1400 44 0 6 chr2 26476168 26476349 -224211505 + (TTC)n Simple_repeat Simple_repeat 1 180 0 675 195 12 6 chr2 26476350 26476519 -224211335 + CT-rich Low_complexity Low_complexity 1 170 0 2203 128 3 0 chr2 26476513 26476817 -224211037 - AluSq SINE Alu -14 299 1 695 296 12 83 chr2 26476833 26477256 -224210598 + MLT1J LTR MaLR 26 418 -93 389 256 21 89 chr2 26477333 26477524 -224210330 + MER5B DNA MER1_type 1 178 0 401 247 21 0 chr2 26477578 26477671 -224210183 - MER5A DNA MER1_type -80 109 15 2108 222 69 27 chr2 26478751 26479315 -224208539 + MLT1E LTR MaLR 3 590 -3 1094 227 23 15 chr2 26479659 26480081 -224207773 - L1ME LINE L1 -4904 2053 1534 1600 210 59 2 chr2 26480083 26480494 -224207360 + MLT2B1 LTR ERVL 1 480 -40 255 61 0 0 chr2 26480503 26480536 -224207318 + (TG)n Simple_repeat Simple_repeat 2 34 0 354 343 0 9 chr2 26480536 26480644 -224207210 - L1MC4 LINE L1 -1341 6701 6595 348 138 0 12 chr2 26480647 26480719 -224207135 + MLT2B1 LTR ERVL 386 520 0 1673 248 84 64 chr2 26480720 26481459 -224206395 - L1ME LINE L1 -5310 1637 884 183 80 0 0 chr2 26481529 26481554 -224206300 - MIR SINE MIR -67 141 117 493 185 74 9 chr2 26481903 26482011 -224205843 - MIR3 SINE MIR -5 203 89 599 224 75 17 chr2 26482712 26482886 -224204968 + Charlie7 DNA MER1_type 385 568 -2044 180 0 0 0 chr2 26483092 26483112 -224204742 + (CA)n Simple_repeat Simple_repeat 1 20 0 4298 232 114 19 chr2 26483201 26483644 -224204210 + Charlie7 DNA MER1_type 998 1397 -1215 2326 92 0 10 chr2 26483644 26483949 -224203905 + AluSq SINE Alu 1 302 -11 4298 232 114 19 chr2 26483949 26484960 -224202894 + Charlie7 DNA MER1_type 1397 2591 -21 297 250 158 0 chr2 26484960 26485080 -224202774 - MIR3 SINE MIR -51 157 19 2194 116 0 13 chr2 26485199 26485509 -224202345 + AluSx SINE Alu 1 306 -6 2411 96 0 0 chr2 26486973 26487266 -224200588 + AluSc SINE Alu 1 293 -16 2161 103 7 3 chr2 26487302 26487619 -224200235 + AluSx SINE Alu 2 319 0 787 257 49 13 chr2 26487900 26488126 -224199728 + L1MC3 LINE L1 4509 4742 -1404 1134 186 51 5 chr2 26488126 26488341 -224199513 + AluJo SINE Alu 1 225 -87 270 0 0 0 chr2 26488403 26488433 -224199421 + (TA)n Simple_repeat Simple_repeat 2 31 0 1404 239 31 18 chr2 26488448 26488899 -224198955 + L1MC3 LINE L1 4755 5211 -935 * 2170 234 80 67 chr2 26488898 26489812 -224198042 + L1MC3 LINE L1 5735 6660 -1125 1810 189 39 61 chr2 26489817 26489943 -224197911 + L1MD3 LINE L1 7416 7543 -452 1513 170 51 4 chr2 26489943 26490219 -224197635 + AluJo SINE Alu 1 289 -23 1810 189 39 61 chr2 26490219 26490553 -224197301 + L1MD3 LINE L1 7543 7866 -129 250 203 0 34 chr2 26490580 26490639 -224197215 - L1MD3 LINE L1 -53 7942 7886 625 260 13 4 chr2 26490664 26490891 -224196963 + L1MEc LINE L1 660 888 -5508 1907 158 0 17 chr2 26490892 26491190 -224196664 + AluJb SINE Alu 15 307 -5 885 314 27 36 chr2 26491193 26491260 -224196594 + L1MEc LINE L1 1388 1454 -4942 2142 148 0 0 chr2 26491260 26491571 -224196283 + AluJo SINE Alu 1 311 -1 885 314 27 36 chr2 26491571 26491978 -224195876 + L1MEc LINE L1 1454 1858 -4538 * 1237 239 59 20 chr2 26491972 26492454 -224195400 + L1MEc LINE L1 2586 3114 -3101 378 241 45 9 chr2 26494704 26494816 -224193038 + MIR SINE MIR 111 226 -36 2316 102 0 10 chr2 26495117 26495420 -224192434 + AluSx SINE Alu 1 300 -12 247 403 0 15 chr2 26495530 26495664 -224192190 + MER5B DNA MER1_type 13 144 -34 416 372 76 14 chr2 26497847 26498070 -224189784 - MIR SINE MIR -6 256 20 462 300 67 22 chr2 26498424 26498604 -224189250 + L3 LINE CR1 439 626 -951 596 280 98 44 chr2 26498793 26499068 -224188786 + L1ME4a LINE L1 5645 5934 -187 286 310 171 12 chr2 26500307 26500565 -224187289 - L3 LINE CR1 -100 1477 1179 292 271 9 65 chr2 26500702 26500809 -224187045 - MIR SINE MIR -44 218 118 202 318 34 0 chr2 26501736 26501824 -224186030 + MIR SINE MIR 56 146 -62 224 330 57 0 chr2 26501922 26502010 -224185844 - MIR SINE MIR -77 185 93 290 292 21 52 chr2 26502189 26502333 -224185521 + MIR SINE MIR 16 156 -62 344 340 27 27 chr2 26502626 26502776 -224185078 - MIR3 SINE MIR -43 165 16 195 314 49 0 chr2 26502788 26502890 -224184964 - MIR SINE MIR -96 166 60 302 315 30 36 chr2 26503198 26503363 -224184491 + MIR SINE MIR 67 230 -32 207 169 108 62 chr2 26504207 26504272 -224183582 - MIR SINE MIR -63 145 78 252 0 0 0 chr2 26504281 26504309 -224183545 + (TG)n Simple_repeat Simple_repeat 1 28 0 494 266 36 7 chr2 26504570 26504709 -224183145 + MIR SINE MIR 79 221 -41 292 340 0 42 chr2 26505055 26505199 -224182655 + MIR3 SINE MIR 3 140 -68 1848 155 3 48 chr2 26505451 26505760 -224182094 - AluJb SINE Alu -17 295 1 577 308 37 27 chr2 26506655 26506954 -224180900 + HAL1 LINE L1 1 302 -2205 251 279 25 0 chr2 26507189 26507268 -224180586 + HAL1 LINE L1 199 279 -2228 282 228 38 13 chr2 26507273 26507352 -224180502 + HAL1 LINE L1 199 279 -2228 3833 234 139 100 chr2 26507357 26508579 -224179275 + HAL1 LINE L1 199 1372 -1135 800 194 0 0 chr2 26508579 26508713 -224179141 + AluJo SINE Alu 1 134 -178 3833 234 139 100 chr2 26508713 26509240 -224178614 + HAL1 LINE L1 1372 1877 -630 2341 98 0 0 chr2 26509240 26509552 -224178302 + AluSx SINE Alu 1 312 0 3833 234 139 100 chr2 26509552 26509786 -224178068 + HAL1 LINE L1 1877 2400 -107 29 40 0 40 chr2 26509832 26509862 -224177992 + AT_rich Low_complexity Low_complexity 1 31 -42 2221 129 0 0 chr2 26509862 26510197 -224177657 + AluSx SINE Alu 1 312 0 29 40 0 40 chr2 26510197 26510223 -224177631 + AT_rich Low_complexity Low_complexity 31 57 -16 1833 184 3 0 chr2 26510223 26510534 -224177320 + AluJb SINE Alu 1 312 0 29 40 0 40 chr2 26510534 26510551 -224177303 + AT_rich Low_complexity Low_complexity 57 73 0 24 32 0 0 chr2 26511723 26511754 -224176100 + AT_rich Low_complexity Low_complexity 1 31 0 1611 62 48 140 chr2 26511875 26512211 -224175643 + L1MA1 LINE L1 5990 6294 -8 222 310 0 0 chr2 26512375 26512446 -224175408 - L3 LINE CR1 -156 1421 1351 2491 81 3 0 chr2 26512509 26512807 -224175047 - AluSp SINE Alu -10 303 5 2611 142 4 9 chr2 26512863 26513321 -224174533 - L1P LINE L1 -962 5184 4729 438 210 66 18 chr2 26513589 26513756 -224174098 + L1ME4a LINE L1 5946 6120 -1 345 230 56 112 chr2 26514435 26514596 -224173258 + MIR3 SINE MIR 56 207 -1 201 128 26 26 chr2 26515545 26515584 -224172270 - MIR SINE MIR -118 144 106 209 180 229 0 chr2 26516973 26517034 -224170820 - MIR3 SINE MIR -10 198 124 398 288 21 0 chr2 26517506 26517663 -224170191 + MIR SINE MIR 33 190 -61 595 305 52 5 chr2 26517733 26517946 -224169908 + MIR SINE MIR 15 237 -25 1879 172 3 0 chr2 26518344 26518640 -224169214 + AluJo SINE Alu 1 297 -15 267 243 14 0 chr2 26518849 26518919 -224168935 + LTR33 LTR ERVL 51 121 -400 2219 128 0 3 chr2 26519625 26519937 -224167917 + AluSx SINE Alu 1 311 -1 304 206 55 0 chr2 26519974 26520047 -224167807 - MER97c DNA MER1_type? -914 176 100 418 274 48 8 chr2 26520192 26520316 -224167538 - MIR SINE MIR -82 180 52 443 298 47 53 chr2 26520406 26520577 -224167277 - MIR SINE MIR -43 219 50 318 281 70 0 chr2 26520990 26521118 -224166736 + MIR3 SINE MIR 66 202 -6 294 315 73 30 chr2 26521178 26521343 -224166511 - MER5B DNA MER1_type -1 177 6 386 245 20 19 chr2 26521472 26521591 -224166263 + MIR SINE MIR 38 154 -58 592 318 16 24 chr2 26521598 26521850 -224166004 - MIR SINE MIR 0 262 13 472 295 174 9 chr2 26522471 26522695 -224165159 - L3 LINE CR1 -871 706 446 2316 261 85 47 chr2 26523023 26524120 -224163734 - HAL1 LINE L1 -7 2500 1363 296 273 13 0 chr2 26524116 26524193 -224163661 - HAL1 LINE L1 -1638 869 792 * 332 234 168 105 chr2 26524194 26524622 -224163232 - HAL1 LINE L1 -1989 518 64 367 275 58 0 chr2 26524671 26524809 -224163045 - L1MC4a LINE L1 -1915 5893 5748 2140 115 3 26 chr2 26525819 26526132 -224161722 + AluSx SINE Alu 1 306 -6 1856 53 0 8 chr2 26526343 26526587 -224161267 - L1PA7 LINE L1 0 6154 5913 657 113 35 22 chr2 26526506 26526658 -224161196 - L1PA7 LINE L1 -161 5993 5845 266 104 0 21 chr2 26527237 26527285 -224160569 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 1554 72 36 5 chr2 26528094 26528317 -224159537 - MER30 DNA MER1_type 0 230 1 753 207 186 0 chr2 26528748 26528941 -224158913 + MIR SINE MIR 31 259 -3 1710 158 49 3 chr2 26528954 26529238 -224158616 + AluSx SINE Alu 1 297 -15 1121 133 0 0 chr2 26529272 26529430 -224158424 + FRAM SINE Alu 16 173 -3 412 262 24 49 chr2 26529538 26529702 -224158152 - LTR33 LTR ERVL -3 518 359 183 80 0 0 chr2 26530220 26530245 -224157609 + (A)n Simple_repeat Simple_repeat 1 25 0 285 98 0 0 chr2 26530256 26530297 -224157557 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 298 80 36 chr2 26530425 26530650 -224157204 + MIR SINE MIR 14 248 -14 1615 130 0 0 chr2 26530659 26530875 -224156979 + AluSg/x SINE Alu 84 299 -13 2322 111 0 0 chr2 26530912 26531210 -224156644 + AluSq SINE Alu 1 298 -15 284 269 37 46 chr2 26531544 26531652 -224156202 - MER113 DNA MER1_type? -100 421 315 695 207 50 27 chr2 26531976 26532198 -224155656 - MER113 DNA MER1_type? -258 263 37 300 111 0 0 chr2 26532198 26532252 -224155602 + (TC)n Simple_repeat Simple_repeat 1 54 0 4805 180 23 11 chr2 26532853 26533089 -224154765 + L1MB7 LINE L1 5254 5486 -698 2204 142 0 0 chr2 26533089 26533400 -224154454 + AluJb SINE Alu 2 312 0 4805 180 23 11 chr2 26533400 26534079 -224153775 + L1MB7 LINE L1 5486 6180 -4 2153 141 0 0 chr2 26535989 26536293 -224151561 + AluSq SINE Alu 1 304 -9 372 290 131 0 chr2 26536472 26536617 -224151237 - MIR3 SINE MIR -9 199 36 197 175 0 0 chr2 26536740 26536780 -224151074 - MIR SINE MIR -134 74 35 801 291 115 47 chr2 26536956 26537982 -224149872 - L2 LINE L2 0 3272 2174 272 151 75 0 chr2 26537984 26538037 -224149817 - L2 LINE L2 -70 3243 3187 261 273 115 15 chr2 26538802 26538956 -224148898 + L1ME LINE L1 691 1156 -4845 470 293 115 19 chr2 26540456 26540770 -224147084 + L2 LINE L2 2541 2884 -430 233 328 112 15 chr2 26540946 26541080 -224146774 - MIR3 SINE MIR -46 162 16 252 0 0 0 chr2 26541949 26541977 -224145877 + (GA)n Simple_repeat Simple_repeat 1 28 0 213 39 0 0 chr2 26542225 26542251 -224145603 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 1371 62 0 0 chr2 26542251 26542429 -224145425 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 237 196 0 0 chr2 26542429 26542480 -224145374 + GA-rich Low_complexity Low_complexity 1 51 0 801 145 0 43 chr2 26543208 26543346 -224144508 - FLAM_C SINE Alu 0 133 2 3029 6 0 0 chr2 26543357 26543674 -224144180 - AluYb8 SINE Alu -1 317 1 859 125 7 13 chr2 26543708 26543860 -224143994 + L1PB2 LINE L1 5999 6149 -2 270 300 8 50 chr2 26544058 26544127 -224143727 + L3 LINE CR1 1127 1190 -387 2406 92 0 0 chr2 26544127 26544419 -224143435 - AluSc SINE Alu -14 295 4 270 300 8 50 chr2 26544419 26544469 -224143385 + L3 LINE CR1 1190 1241 -336 744 248 96 125 chr2 26544473 26545075 -224142779 - MLT1K LTR MaLR -2 586 2 248 345 90 7 chr2 26545121 26545266 -224142588 + L2 LINE L2 2704 2860 -454 2350 101 0 0 chr2 26545496 26545792 -224142062 + AluSx SINE Alu 1 296 -16 240 216 39 29 chr2 26546853 26546955 -224140899 + L1MEd LINE L1 83 185 -5934 421 299 59 51 chr2 26547022 26547276 -224140578 + L1MEd LINE L1 646 901 -5218 1606 218 28 14 chr2 26547281 26547811 -224140043 - L1MEc LINE L1 -3605 2610 2116 674 305 88 33 chr2 26547815 26548009 -224139845 - L1MC4a LINE L1 -1930 5878 5696 1958 196 0 0 chr2 26548009 26548321 -224139533 - AluSx SINE Alu 0 312 1 674 305 88 33 chr2 26548321 26548490 -224139364 - L1MC4a LINE L1 -2112 5696 5495 444 112 45 0 chr2 26548504 26548593 -224139261 + CT-rich Low_complexity Low_complexity 4 96 0 243 264 107 66 chr2 26548601 26548715 -224139139 - L1P5 LINE L1 -691 5465 5329 1805 138 53 76 chr2 26548715 26548815 -224139039 + MLT1B LTR MaLR 3 104 -286 2245 125 6 0 chr2 26548815 26549126 -224138728 - AluSq SINE Alu 0 313 1 1805 138 53 76 chr2 26549126 26549422 -224138432 + MLT1B LTR MaLR 104 390 0 243 264 107 66 chr2 26549422 26549498 -224138356 - L1P5 LINE L1 -827 5329 5258 2229 99 0 49 chr2 26549505 26549829 -224138025 + AluSg SINE Alu 2 309 -1 339 280 45 30 chr2 26549847 26549979 -224137875 + MER94 DNA DNA 1 134 0 3527 182 20 24 chr2 26550026 26550810 -224137044 - L1MC2 LINE L1 -2 6342 5562 1130 123 12 6 chr2 26550817 26550980 -224136874 + AluSg/x SINE Alu 123 286 -24 4534 203 49 62 chr2 26550990 26551972 -224135882 - L1MC2 LINE L1 -743 5403 4630 5610 60 17 14 chr2 26551972 26552687 -224135167 - SVA Other Other -1 1385 669 4534 203 49 62 chr2 26552687 26553278 -224134576 - L1MC2 LINE L1 -1516 4630 4032 24 32 0 0 chr2 26553312 26553343 -224134511 + AT_rich Low_complexity Low_complexity 1 31 0 361 271 52 66 chr2 26553346 26553370 -224134484 - L1MC4a LINE L1 -1007 5139 5116 2505 77 0 0 chr2 26553370 26553669 -224134185 - AluY SINE Alu -12 299 1 361 271 52 66 chr2 26553669 26553824 -224134030 - L1MC4a LINE L1 -1030 5116 4957 911 296 69 13 chr2 26553975 26554293 -224133561 + LTR16B LTR ERVL 129 464 0 385 289 70 22 chr2 26554771 26555044 -224132810 - L1MC4a LINE L1 -1326 4820 4535 459 286 54 42 chr2 26555178 26555437 -224132417 - L2 LINE L2 -187 3085 2824 350 345 52 61 chr2 26555475 26555597 -224132257 - MIR SINE MIR -30 232 111 1539 148 48 41 chr2 26555597 26555867 -224131987 + AluJo SINE Alu 25 296 -16 350 345 52 61 chr2 26555867 26555973 -224131881 - MIR SINE MIR -151 111 6 251 296 14 0 chr2 26556302 26556373 -224131481 - L2 LINE L2 0 3272 3201 330 182 0 0 chr2 26556563 26556629 -224131225 + CT-rich Low_complexity Low_complexity 4 69 0 311 271 35 0 chr2 26556629 26556714 -224131140 - L2 LINE L2 -1 3271 3184 522 267 48 6 chr2 26556954 26557119 -224130735 + MIR SINE MIR 32 203 -59 * 620 261 96 21 chr2 26557113 26557301 -224130553 - L2 LINE L2 -4 3309 3108 393 230 123 70 chr2 26557301 26557488 -224130366 - LTR16A1 LTR ERVL 0 457 261 830 119 8 0 chr2 26557621 26557755 -224130099 + (GGAA)n Simple_repeat Simple_repeat 1 135 0 586 169 8 8 chr2 26557939 26558063 -224129791 + GA-rich Low_complexity Low_complexity 2 125 0 526 265 15 46 chr2 26558424 26558620 -224129234 + MIR3 SINE MIR 19 208 0 732 284 34 5 chr2 26558953 26559157 -224128697 + MER63A DNA MER1_type 1 210 0 184 294 188 0 chr2 26559157 26559242 -224128612 - MIR SINE MIR -112 150 50 286 290 0 83 chr2 26559322 26559467 -224128387 + MIR SINE MIR 21 153 -109 291 341 0 0 chr2 26560253 26560341 -224127513 + (CA)n Simple_repeat Simple_repeat 2 89 0 219 360 33 7 chr2 26561755 26561908 -224125946 - MIR3 SINE MIR -30 178 22 2054 111 68 0 chr2 26562532 26562812 -224125042 + AluSx SINE Alu 1 299 -13 2532 110 30 46 chr2 26563549 26563915 -224123939 + MSTC LTR MaLR 1 360 -68 2323 107 0 3 chr2 26563915 26564224 -224123630 + AluSx SINE Alu 1 308 -4 2532 110 30 46 chr2 26564224 26564292 -224123562 + MSTC LTR MaLR 360 428 0 1215 152 43 0 chr2 26564437 26564647 -224123207 + MER20 DNA MER1_type 1 219 0 1416 267 56 45 chr2 26564700 26565235 -224122619 + LTR67 LTR ERVL 4 544 -13 283 315 100 54 chr2 26566240 26566370 -224121484 - L2 LINE L2 0 3272 3137 291 335 12 43 chr2 26566626 26566787 -224121067 - L2 LINE L2 -442 2872 2717 205 157 20 39 chr2 26567101 26567152 -224120702 + GA-rich Low_complexity Low_complexity 2 51 0 366 243 257 15 chr2 26567186 26567322 -224120532 - MIR3 SINE MIR -24 184 16 231 36 0 0 chr2 26567369 26567397 -224120457 + (TG)n Simple_repeat Simple_repeat 1 28 0 205 274 16 0 chr2 26568576 26568638 -224119216 + MIR3 SINE MIR 104 166 -42 196 281 0 18 chr2 26570061 26570118 -224117736 - L2 LINE L2 0 3313 3258 450 291 64 69 chr2 26570183 26570257 -224117597 + MIR SINE MIR 3 76 -186 2189 119 0 22 chr2 26570257 26570576 -224117278 - AluSx SINE Alu 0 312 1 450 291 64 69 chr2 26570576 26570704 -224117150 + MIR SINE MIR 76 204 -58 200 336 19 9 chr2 26570725 26570832 -224117022 - L2 LINE L2 -338 2934 2827 266 213 12 100 chr2 26571619 26571699 -224116155 - MIR SINE MIR -58 150 81 446 315 61 11 chr2 26572302 26572483 -224115371 - MIR3 SINE MIR -15 193 4 180 321 0 0 chr2 26573060 26573116 -224114738 - L2 LINE L2 -10 3262 3207 601 306 138 14 chr2 26573118 26573474 -224114380 - L3 LINE CR1 -77 1500 1101 216 67 0 0 chr2 26573677 26573707 -224114147 + (CA)n Simple_repeat Simple_repeat 2 31 0 432 51 0 0 chr2 26574250 26574309 -224113545 + (CA)n Simple_repeat Simple_repeat 1 59 0 224 313 52 10 chr2 26575543 26575639 -224112215 - L2 LINE L2 -20 3252 3153 562 255 32 58 chr2 26575889 26576077 -224111777 - MIR3 SINE MIR -6 202 20 263 323 24 73 chr2 26576521 26576685 -224111169 - L2 LINE L2 -214 3058 2903 229 380 23 0 chr2 26576900 26577029 -224110825 - MIR3 SINE MIR -11 197 66 622 209 16 8 chr2 26577333 26577462 -224110392 + MIR3 SINE MIR 58 187 -21 435 254 244 40 chr2 26578101 26578302 -224109552 + MIR SINE MIR 15 256 -6 267 320 40 0 chr2 26578576 26578676 -224109178 - MIR3 SINE MIR -21 187 84 187 337 23 23 chr2 26578691 26578777 -224109077 - MIR SINE MIR -106 156 71 525 308 41 0 chr2 26579130 26579302 -224108552 + MIR3 SINE MIR 20 198 -10 242 239 26 53 chr2 26579396 26579509 -224108345 + (TCTCTG)n Simple_repeat Simple_repeat 5 114 0 201 139 0 0 chr2 26579585 26579628 -224108226 + (TC)n Simple_repeat Simple_repeat 2 44 0 245 152 25 38 chr2 26579722 26579801 -224108053 + (CGGG)n Simple_repeat Simple_repeat 2 79 0 207 0 0 0 chr2 26579826 26579849 -224108005 + (CGG)n Simple_repeat Simple_repeat 3 25 0 214 201 10 29 chr2 26580979 26581090 -224106764 + (CA)n Simple_repeat Simple_repeat 1 108 0 * 228 35 0 0 chr2 26581089 26581118 -224106736 + (GA)n Simple_repeat Simple_repeat 2 30 0 532 270 26 7 chr2 26581219 26581371 -224106483 + MIR3 SINE MIR 52 206 -2 195 370 55 62 chr2 26582302 26582327 -224105527 + L2 LINE L2 2941 2965 -307 942 195 0 24 chr2 26582327 26582496 -224105358 - FRAM SINE Alu -1 165 1 195 370 55 62 chr2 26582496 26582762 -224105092 + L2 LINE L2 2965 3230 -42 401 313 17 22 chr2 26583358 26583499 -224104355 - MIR SINE MIR -71 137 16 393 269 172 0 chr2 26583846 26583991 -224103863 - MIR3 SINE MIR -3 205 36 580 273 44 24 chr2 26584052 26584257 -224103597 - MIR SINE MIR 0 262 54 1655 143 0 23 chr2 26584327 26584592 -224103262 + AluSx SINE Alu 2 260 -52 294 348 17 9 chr2 26585105 26585220 -224102634 - MIR3 SINE MIR -90 118 3 621 227 119 70 chr2 26585413 26585660 -224102194 + MIR SINE MIR 4 262 0 440 129 0 0 chr2 26585925 26585987 -224101867 + AluS SINE Alu 1 62 -251 2162 128 0 3 chr2 26586006 26586365 -224101489 + AluSx SINE Alu 1 358 0 257 356 61 8 chr2 26586891 26587023 -224100831 - MIR SINE MIR -77 185 47 284 252 114 41 chr2 26587210 26587333 -224100521 - MIR3 SINE MIR -41 167 36 540 45 0 0 chr2 26587826 26587893 -224099961 + (CAT)n Simple_repeat Simple_repeat 3 69 0 213 65 0 0 chr2 26587894 26587925 -224099929 + (TC)n Simple_repeat Simple_repeat 2 32 0 189 307 23 57 chr2 26587926 26588014 -224099840 + MIR SINE MIR 66 150 -112 496 256 143 36 chr2 26588064 26588232 -224099622 - MER5A DNA MER1_type 0 189 4 273 169 77 0 chr2 26588692 26588757 -224099097 - MLT1A2 LTR MaLR 0 374 305 1899 155 7 0 chr2 26588772 26589075 -224098779 + AluSx SINE Alu 2 306 -6 1136 113 0 39 chr2 26589075 26589268 -224098586 - L1PA13 LINE L1 -11 6152 5966 268 210 16 16 chr2 26589268 26589330 -224098524 - MLT1A2 LTR MaLR -123 242 181 948 318 149 16 chr2 26589455 26589805 -224098049 + L3 LINE CR1 1093 1510 -67 1227 270 28 47 chr2 26589805 26589952 -224097902 - MLT2D LTR ERVL 0 414 266 2140 115 0 3 chr2 26589952 26590247 -224097607 + AluSx SINE Alu 1 294 -18 1227 270 28 47 chr2 26590247 26590521 -224097333 - MLT2D LTR ERVL -148 266 1 948 318 149 16 chr2 26590521 26590594 -224097260 + L3 LINE CR1 1510 1572 -5 181 264 62 85 chr2 26590714 26590843 -224097011 - L2 LINE L2 -1 3312 3187 733 218 0 69 chr2 26592012 26592079 -224095775 - MIR SINE MIR -43 219 149 1770 174 27 0 chr2 26592079 26592377 -224095477 - AluJb SINE Alu -6 306 1 733 218 0 69 chr2 26592377 26592483 -224095371 - MIR SINE MIR -113 149 58 276 385 59 0 chr2 26592510 26592645 -224095209 - MIR SINE MIR -74 188 46 216 343 38 29 chr2 26593083 26593188 -224094666 - MER5B DNA MER1_type -65 113 8 214 268 188 18 chr2 26593974 26594086 -224093768 + MIR3 SINE MIR 66 196 -12 245 274 76 96 chr2 26594896 26595053 -224092801 - MIR3 SINE MIR -48 160 7 1924 251 136 76 chr2 26595085 26595512 -224092342 - L2 LINE L2 -25 3288 2888 2209 95 0 19 chr2 26595512 26595827 -224092027 + AluSq SINE Alu 1 309 -4 1924 251 136 76 chr2 26595827 26596842 -224091012 - L2 LINE L2 -425 2888 1764 185 288 208 0 chr2 26596868 26596993 -224090861 - MIR SINE MIR -92 170 20 202 287 17 96 chr2 26598249 26598364 -224089490 + MIR SINE MIR 30 135 -73 920 182 30 5 chr2 26598689 26598887 -224088967 + MIR SINE MIR 60 262 0 282 369 68 5 chr2 26599221 26599427 -224088427 + L3b LINE CR1 1106 1324 -259 288 0 0 0 chr2 26599786 26599818 -224088036 + (TG)n Simple_repeat Simple_repeat 2 33 0 1829 95 48 41 chr2 26600616 26600911 -224086943 + AluSx SINE Alu 1 297 -15 2206 115 3 3 chr2 26600912 26601225 -224086629 + AluSq SINE Alu 1 313 0 249 369 92 8 chr2 26601360 26601490 -224086364 + MIR3 SINE MIR 3 143 -65 434 296 101 13 chr2 26602443 26602602 -224085252 + MIR SINE MIR 35 207 -55 210 71 0 0 chr2 26602855 26602883 -224084971 + (G)n Simple_repeat Simple_repeat 1 28 0 476 306 0 0 chr2 26602897 26603077 -224084777 + G-rich Low_complexity Low_complexity 1 180 0 284 284 55 28 chr2 26603951 26604060 -224083794 + L2 LINE L2 3202 3313 0 2022 100 76 0 chr2 26604451 26604741 -224083113 + AluSx SINE Alu 1 312 0 2165 117 3 3 chr2 26605100 26605409 -224082445 + AluSq SINE Alu 5 313 0 249 369 92 8 chr2 26605545 26605675 -224082179 + MIR3 SINE MIR 3 143 -65 2212 92 0 0 chr2 26605906 26606219 -224081635 + AluSx SINE Alu 1 313 0 192 267 43 60 chr2 26606245 26606361 -224081493 + MIR SINE MIR 26 139 -123 685 276 56 42 chr2 26606431 26606645 -224081209 + MIR SINE MIR 46 262 0 180 158 298 0 chr2 26606680 26606737 -224081117 - L2 LINE L2 -32 3240 3167 475 259 129 0 chr2 26607274 26607421 -224080433 - MIR3 SINE MIR -9 199 34 326 333 73 30 chr2 26607464 26607629 -224080225 + MIR SINE MIR 41 212 -50 251 308 0 0 chr2 26607801 26607879 -224079975 - L2 LINE L2 -215 3057 2980 333 260 17 157 chr2 26608042 26608190 -224079664 - MIR3 SINE MIR -1 207 102 1097 197 22 31 chr2 26608190 26608413 -224079441 + MER58A DNA MER1_type 4 224 0 333 260 17 157 chr2 26608413 26608499 -224079355 - MIR3 SINE MIR -106 102 6 513 275 0 8 chr2 26609172 26609292 -224078562 - L2 LINE L2 -2 3311 3193 227 243 27 27 chr2 26609327 26609428 -224078426 + C-rich Low_complexity Low_complexity 1 101 0 1030 289 66 40 chr2 26609750 26609916 -224077938 - L1ME4a LINE L1 -4 6117 5957 1786 168 3 0 chr2 26609916 26610207 -224077647 - AluJb SINE Alu -20 292 1 1030 289 66 40 chr2 26610207 26610583 -224077271 - L1ME4a LINE L1 -164 5957 5561 343 240 16 58 chr2 26610704 26610825 -224077029 + L2 LINE L2 2970 3085 -187 515 192 19 0 chr2 26611175 26611279 -224076575 + MIR SINE MIR 44 149 -59 1973 114 29 0 chr2 26611284 26611581 -224076273 + AluSx SINE Alu 5 309 0 233 217 0 0 chr2 26613608 26613654 -224074200 - MIR3 SINE MIR -10 198 153 564 251 112 6 chr2 26613679 26613858 -224073996 - MIR SINE MIR -2 260 63 426 218 123 35 chr2 26614178 26614348 -224073506 - MIR3 SINE MIR -23 185 1 672 326 0 5 chr2 26614871 26615061 -224072793 + MIR3 SINE MIR 16 204 -4 317 292 39 15 chr2 26615733 26615863 -224071991 + MIR SINE MIR 85 217 -45 388 251 13 71 chr2 26616627 26616767 -224071087 - MIR3 SINE MIR -49 159 32 670 262 5 32 chr2 26617211 26617370 -224070484 - MIR SINE MIR 0 262 100 195 42 0 0 chr2 26617370 26617394 -224070460 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 279 0 0 0 chr2 26617393 26617424 -224070430 + (GA)n Simple_repeat Simple_repeat 2 32 0 670 262 5 32 chr2 26617394 26617451 -224070403 - MIR SINE MIR -162 100 81 320 215 43 4 chr2 26617825 26617926 -224069928 - MIR SINE MIR -65 143 73 293 321 142 0 chr2 26618436 26618570 -224069284 - MIR3 SINE MIR -34 174 22 193 340 64 11 chr2 26618651 26618745 -224069109 + MIR SINE MIR 34 132 -130 345 251 66 81 chr2 26620634 26620826 -224067028 - MIR3 SINE MIR -1 261 73 2039 137 3 3 chr2 26620826 26621125 -224066729 + AluJb SINE Alu 1 299 -13 345 251 66 81 chr2 26621125 26621187 -224066667 - MIR3 SINE MIR -189 73 12 1869 111 42 29 chr2 26622572 26622879 -224064975 + AluSx SINE Alu 2 312 0 476 301 22 22 chr2 26622981 26623164 -224064690 - MIR3 SINE MIR -22 186 4 461 230 74 20 chr2 26623532 26623680 -224064174 + MER112 DNA MER1_type 99 254 -6 554 213 27 13 chr2 26624587 26624737 -224063117 - MER103 DNA DNA -1 165 14 343 310 70 29 chr2 26624917 26625088 -224062766 - MIR SINE MIR -84 178 1 2395 96 0 0 chr2 26625250 26625562 -224062292 + AluSx SINE Alu 1 312 0 2136 107 0 0 chr2 26625985 26626295 -224061559 - AluSx SINE Alu 0 311 2 201 39 0 0 chr2 26626327 26626353 -224061501 + (CA)n Simple_repeat Simple_repeat 2 27 0 260 379 57 0 chr2 26626355 26626479 -224061375 - MIR3 SINE MIR -43 165 35 252 0 0 0 chr2 26626481 26626509 -224061345 + (CA)n Simple_repeat Simple_repeat 2 29 0 213 269 97 90 chr2 26626785 26626833 -224061021 - MIR SINE MIR -51 211 165 2287 96 0 0 chr2 26626833 26627155 -224060699 + AluSq SINE Alu 1 322 0 213 269 97 90 chr2 26627155 26627239 -224060615 - MIR SINE MIR -97 165 77 1931 159 0 0 chr2 26628062 26628364 -224059490 - AluSx SINE Alu -10 302 1 286 391 29 7 chr2 26628489 26628627 -224059227 - L3 LINE CR1 -824 753 613 2037 90 76 0 chr2 26628835 26629123 -224058731 + AluSg SINE Alu 1 310 0 568 218 75 14 chr2 26629485 26629632 -224058222 - MIR SINE MIR -73 189 34 183 313 75 0 chr2 26630448 26630528 -224057326 - MIR3 SINE MIR -19 189 104 2202 88 3 7 chr2 26630530 26630824 -224057030 + AluSq SINE Alu 1 293 -20 661 273 87 55 chr2 26630867 26631171 -224056683 + L1ME1 LINE L1 5682 5975 -359 1913 120 10 7 chr2 26631171 26631463 -224056391 + AluJo SINE Alu 1 293 -19 661 273 87 55 chr2 26631463 26631644 -224056210 + L1ME1 LINE L1 5975 6334 0 233 379 39 0 chr2 26633054 26633157 -224054697 + L2 LINE L2 3157 3263 -9 218 347 74 8 chr2 26634283 26634404 -224053450 - MIR3 SINE MIR -28 180 52 274 250 66 13 chr2 26634649 26634725 -224053129 - MIR3 SINE MIR -20 188 109 286 296 97 0 chr2 26635010 26635137 -224052717 - MIR3 SINE MIR -85 123 13 248 56 0 0 chr2 26636050 26636086 -224051768 - MADE1 DNA Mariner 0 80 45 221 231 175 4 chr2 26636274 26636411 -224051443 - MIR SINE MIR -1 261 93 223 151 94 0 chr2 26686948 26687001 -224000853 - MIR SINE MIR -112 150 93 2111 114 3 17 chr2 26687275 26687572 -224000282 + AluSx SINE Alu 2 294 -18 659 136 0 10 chr2 26687572 26687675 -224000179 - AluJo/FLAM SINE Alu -194 118 17 203 333 0 13 chr2 26687873 26687948 -223999906 - MIR SINE MIR -86 122 49 487 308 36 41 chr2 26688279 26688313 -223999541 - L1MC4a LINE L1 -1880 5928 5895 1884 174 0 19 chr2 26688313 26688623 -223999231 - AluJo SINE Alu -8 304 1 487 308 36 41 chr2 26688623 26688809 -223999045 - L1MC4a LINE L1 -1913 5895 5709 419 270 85 21 chr2 26688985 26689174 -223998680 - L1MC4a LINE L1 -2184 5624 5424 1182 195 27 14 chr2 26689183 26689404 -223998450 - AluJb SINE Alu -88 224 1 894 203 39 0 chr2 26689409 26689591 -223998263 - AluJo SINE Alu -1 311 123 275 320 46 13 chr2 26689591 26689716 -223998138 - L1MC4a LINE L1 -2395 5413 5281 1976 132 2 103 chr2 26689716 26690079 -223997775 - L1MB8 LINE L1 0 6178 5865 1639 167 29 4 chr2 26690079 26690386 -223997468 + AluSx SINE Alu 1 314 0 1976 132 2 103 chr2 26690386 26690467 -223997387 - L1MB8 LINE L1 -313 5865 5777 275 320 46 13 chr2 26690467 26690494 -223997360 - L1MC4a LINE L1 -2527 5281 5256 305 289 40 62 chr2 26690641 26690751 -223997103 - L1MC4a LINE L1 -1089 5057 4946 2251 95 3 30 chr2 26690751 26691055 -223996799 - AluSx SINE Alu -16 296 1 305 289 40 62 chr2 26691055 26691232 -223996622 - L1MC4a LINE L1 -1200 4946 4769 250 223 77 179 chr2 26691266 26691348 -223996506 - L1MC5 LINE L1 -48 7913 7824 2286 120 3 0 chr2 26691348 26691657 -223996197 + AluSx SINE Alu 1 310 -2 250 223 77 179 chr2 26691657 26691728 -223996126 - L1MC5 LINE L1 -137 7824 7747 6731 113 6 44 chr2 26691728 26692735 -223995119 + LTR5 LTR ERVK 1 969 0 250 223 77 179 chr2 26692735 26692756 -223995098 - L1MC5 LINE L1 -214 7747 7725 1682 163 3 55 chr2 26692756 26693082 -223994772 - AluJb SINE Alu -3 309 1 250 223 77 179 chr2 26693082 26693179 -223994675 - L1MC5 LINE L1 -236 7725 7668 1996 186 116 13 chr2 26693181 26693639 -223994215 + MLT1D LTR MaLR 1 505 0 2031 115 42 7 chr2 26693709 26693995 -223993859 - AluJb SINE Alu -16 296 1 294 231 77 0 chr2 26694144 26694235 -223993619 + MIR3 SINE MIR 62 159 -49 752 169 0 0 chr2 26694363 26694481 -223993373 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 26694481 26694521 -223993333 + AT_rich Low_complexity Low_complexity 1 40 0 611 207 45 34 chr2 26694747 26694830 -223993024 + MER53 DNA DNA 2 83 -106 2969 113 20 73 chr2 26694830 26694981 -223992873 - LTR26B LTR ERV1 -1 530 372 1767 155 33 7 chr2 26694981 26695284 -223992570 - AluJo SINE Alu -1 311 1 2969 113 20 73 chr2 26695284 26695504 -223992350 - LTR26B LTR ERV1 -159 372 196 1740 156 33 7 chr2 26695504 26695779 -223992075 - AluJb SINE Alu -10 302 21 2969 113 20 73 chr2 26695779 26695966 -223991888 - LTR26B LTR ERV1 -335 196 1 611 207 45 34 chr2 26695966 26696061 -223991793 + MER53 DNA DNA 83 182 -7 2151 140 0 0 chr2 26696133 26696426 -223991428 + AluSx SINE Alu 1 293 -19 1995 136 32 23 chr2 26696511 26696820 -223991034 + AluSx SINE Alu 1 312 0 254 278 59 19 chr2 26697657 26697764 -223990090 - MIR SINE MIR -65 143 51 2411 75 20 0 chr2 26698029 26698321 -223989533 + AluSx SINE Alu 3 300 -12 2885 111 89 81 chr2 26698679 26698909 -223988945 + LTR24C LTR ERV1 1 228 -407 2327 95 3 3 chr2 26698909 26699203 -223988651 - AluSx SINE Alu -18 294 1 2885 111 89 81 chr2 26699203 26699602 -223988252 + LTR24C LTR ERV1 228 635 0 2652 166 73 8 chr2 26699647 26700166 -223987688 - MER41A LTR ERV1 0 554 2 192 264 92 0 chr2 26700363 26700450 -223987404 + L2 LINE L2 2939 3033 -239 196 316 94 8 chr2 26700666 26700783 -223987071 + L2 LINE L2 3182 3308 -5 1488 123 0 0 chr2 26701200 26701395 -223986459 + AluSx SINE Alu 1 195 -117 282 73 0 0 chr2 26701395 26701436 -223986418 + AluSx SINE Alu 254 294 -8 227 300 57 57 chr2 26701531 26701671 -223986183 + L2 LINE L2 2910 3049 -223 1591 177 30 7 chr2 26701836 26702107 -223985747 - AluJo SINE Alu -29 283 7 2115 135 0 7 chr2 26702147 26702443 -223985411 + AluSx SINE Alu 3 296 -16 2253 148 45 5 chr2 26702450 26702869 -223984985 - LTR56 LTR ERV1 -2 443 8 3987 117 29 0 chr2 26702934 26703551 -223984303 + MER41B LTR ERV1 1 635 0 2323 102 6 6 chr2 26703632 26703945 -223983909 - AluSp SINE Alu 0 313 1 1783 193 3 3 chr2 26703945 26704245 -223983609 - AluJb SINE Alu -12 300 1 2061 80 9 49 chr2 26704275 26704554 -223983300 + MER4E LTR ERV1 1 267 -512 2177 83 31 14 chr2 26704554 26704844 -223983010 + AluSg SINE Alu 1 295 -15 2061 80 9 49 chr2 26704844 26704890 -223982964 + MER4E LTR ERV1 267 313 -466 1510 70 74 0 chr2 26704901 26705116 -223982738 + MER4E LTR ERV1 536 766 0 261 339 33 25 chr2 26705223 26705344 -223982510 + MIR SINE MIR 22 143 -65 2390 84 0 13 chr2 26705647 26705958 -223981896 + AluSx SINE Alu 1 307 -5 220 243 129 0 chr2 26707092 26707162 -223980692 - L2 LINE L2 -842 2472 2394 297 54 0 0 chr2 26707351 26707388 -223980466 - AluSp/q SINE Alu -35 268 232 2328 116 0 0 chr2 26708179 26708482 -223979372 + AluSx SINE Alu 1 303 -9 689 289 44 18 chr2 26708564 26708789 -223979065 - MIR SINE MIR -20 242 12 319 302 134 13 chr2 26708833 26708982 -223978872 - MIR3 SINE MIR -21 187 21 706 137 32 8 chr2 26709592 26709716 -223978138 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 26709716 26709737 -223978117 + AT_rich Low_complexity Low_complexity 1 21 0 312 221 117 0 chr2 26710115 26710192 -223977662 + MIR3 SINE MIR 93 178 -30 2232 88 27 10 chr2 26710223 26710520 -223977334 - AluY SINE Alu -9 302 1 1836 150 49 0 chr2 26710520 26710806 -223977048 - AluJo SINE Alu -12 300 1 1921 170 0 7 chr2 26711986 26712292 -223975562 + AluJb SINE Alu 1 304 -8 2192 145 0 0 chr2 26712299 26712609 -223975245 + AluSx SINE Alu 1 310 -2 27 0 0 0 chr2 26713180 26713207 -223974647 + AT_rich Low_complexity Low_complexity 1 27 0 833 146 0 0 chr2 26713553 26713683 -223974171 + FLAM_A SINE Alu 4 133 0 303 293 57 9 chr2 26714524 26714630 -223973224 + L3 LINE CR1 1182 1292 -285 310 381 19 12 chr2 26714704 26714864 -223972990 + MER117 DNA MER1_type 33 193 -4 1184 221 19 47 chr2 26714972 26715082 -223972772 - Charlie4a DNA MER1_type -1453 508 396 2409 70 7 10 chr2 26715082 26715383 -223972471 + AluY SINE Alu 1 300 -11 1184 221 19 47 chr2 26715383 26715477 -223972377 - Charlie4a DNA MER1_type -1565 396 301 2252 117 3 0 chr2 26715477 26715775 -223972079 - AluSx SINE Alu -13 299 1 1184 221 19 47 chr2 26715775 26715931 -223971923 - Charlie4a DNA MER1_type -1660 301 157 479 296 0 22 chr2 26716536 26716671 -223971183 + MIR3 SINE MIR 30 161 -47 212 244 0 0 chr2 26716851 26716896 -223970958 + MIR3 SINE MIR 157 201 -7 2076 133 7 3 chr2 26718781 26719074 -223968780 + AluSx SINE Alu 1 294 -18 369 227 153 23 chr2 26719503 26719607 -223968247 - MER112 DNA MER1_type -45 215 126 180 0 0 0 chr2 26719607 26719627 -223968227 + (TG)n Simple_repeat Simple_repeat 2 21 0 369 227 153 23 chr2 26719627 26719698 -223968156 - MER112 DNA MER1_type -134 126 17 2238 86 41 10 chr2 26720801 26721092 -223966762 - AluSx SINE Alu -12 300 1 278 369 56 6 chr2 26721141 26721301 -223966553 + MIR3 SINE MIR 39 206 -2 2058 121 44 7 chr2 26721381 26721679 -223966175 - AluSc SINE Alu 0 309 1 1800 138 73 10 chr2 26721679 26721968 -223965886 - AluJo SINE Alu -3 309 3 207 205 0 0 chr2 26722091 26722130 -223965724 - MIR SINE MIR -58 150 112 209 178 0 22 chr2 26722402 26722447 -223965407 - MIR SINE MIR -71 137 94 2614 93 43 24 chr2 26723012 26723432 -223964422 - MSTA LTR MaLR 0 428 1 361 237 200 0 chr2 26723540 26723675 -223964179 - MIR3 SINE MIR -45 163 2 2319 97 7 13 chr2 26723692 26724000 -223963854 + AluSx SINE Alu 1 306 -6 2711 43 0 0 chr2 26724008 26724310 -223963544 + AluY SINE Alu 3 304 -7 584 134 85 12 chr2 26724310 26724456 -223963398 + Tigger3(Golem) DNA MER2_type 2409 2569 -459 1795 186 0 3 chr2 26724456 26724751 -223963103 - AluJo SINE Alu -18 294 1 584 134 85 12 chr2 26724751 26724762 -223963092 + Tigger3(Golem) DNA MER2_type 2569 2578 -450 * 1672 115 35 0 chr2 26724752 26725013 -223962841 + Tigger3(Golem) DNA MER2_type 2747 3016 -13 1275 99 0 5 chr2 26725125 26725327 -223962527 + AluSc SINE Alu 1 299 -10 817 215 0 7 chr2 26725330 26725474 -223962380 + AluJo/FRAM SINE Alu 137 279 -33 189 0 0 0 chr2 26725489 26725510 -223962344 + (TA)n Simple_repeat Simple_repeat 2 22 0 1343 128 84 0 chr2 26725515 26725754 -223962100 - L1MB3 LINE L1 -19 6164 5902 2275 113 0 7 chr2 26725754 26726063 -223961791 - AluY SINE Alu -4 307 1 1098 162 5 44 chr2 26726073 26726277 -223961577 - AluJb SINE Alu -13 299 104 2248 111 10 3 chr2 26726306 26726612 -223961242 - AluSx SINE Alu -3 309 2 606 165 18 0 chr2 26726613 26726722 -223961132 - AluSq/x SINE Alu -198 115 5 2220 148 15 18 chr2 26726727 26727118 -223960736 - L1MB3 LINE L1 -274 5909 5520 245 182 192 40 chr2 26727140 26727239 -223960615 - L1ME4a LINE L1 -2 6119 6006 271 240 42 52 chr2 26728474 26728570 -223959284 - MIR SINE MIR -111 151 57 899 109 0 0 chr2 26728944 26729063 -223958791 - AluJ SINE Alu -188 124 6 2535 55 0 10 chr2 26729070 26729377 -223958477 - AluY SINE Alu -7 304 1 1212 168 56 5 chr2 26729380 26729594 -223958260 - AluJb SINE Alu -3 309 85 378 293 61 14 chr2 26729659 26729806 -223958048 - L1M4 LINE L1 -1836 4310 4157 194 318 32 0 chr2 26729961 26730024 -223957830 + L2 LINE L2 1234 1298 -2016 * 952 189 5 32 chr2 26730014 26730204 -223957650 - AluJ SINE Alu -16 296 112 277 235 20 39 chr2 26730269 26730371 -223957483 + L2 LINE L2 1290 1389 -1925 2190 103 3 0 chr2 26730525 26730837 -223957017 - AluSp SINE Alu 0 313 1 1911 297 121 37 chr2 26730837 26731872 -223955982 + L2 LINE L2 1681 2805 -509 415 267 38 45 chr2 26731873 26732139 -223955715 - HAL1 LINE L1 -1420 1087 824 2128 106 3 28 chr2 26732167 26732488 -223955366 - AluSq SINE Alu 0 313 1 315 302 79 0 chr2 26732696 26732822 -223955032 + LTR33A LTR ERVL 380 515 -8 412 260 56 38 chr2 26732936 26733224 -223954630 - L1M4 LINE L1 -2979 3167 2875 342 225 171 9 chr2 26733415 26733526 -223954328 + MIR3 SINE MIR 59 187 -21 212 192 26 154 chr2 26733615 26733693 -223954161 - L2 LINE L2 -185 3087 3020 332 177 97 115 chr2 26733715 26733796 -223954058 - L2 LINE L2 0 3313 3233 354 79 270 0 chr2 26733796 26733859 -223953995 - MADE1 DNA Mariner 0 80 1 332 177 97 115 chr2 26733859 26733890 -223953964 - L2 LINE L2 -80 3233 3203 307 213 153 12 chr2 26735417 26735518 -223952336 - FLAM_C SINE Alu -9 124 22 6141 33 12 17 chr2 26736550 26737301 -223950553 - SVA Other Other 0 1386 640 1928 118 24 0 chr2 26737564 26737852 -223950002 - AluSx SINE Alu -17 295 1 29 0 0 0 chr2 26737868 26737897 -223949957 + AT_rich Low_complexity Low_complexity 1 29 0 763 204 0 15 chr2 26737897 26738034 -223949820 - AluJo SINE Alu -176 136 2 940 147 0 40 chr2 26738038 26738215 -223949639 - AluJo SINE Alu -21 291 122 348 196 38 38 chr2 26738216 26738349 -223949505 - HAL1 LINE L1 -1352 1155 1023 248 254 116 87 chr2 26738351 26738524 -223949330 - LTR33A LTR ERVL -3 520 343 493 86 0 0 chr2 26738663 26738733 -223949121 - Alu SINE Alu -11 301 232 552 254 127 25 chr2 26738917 26739114 -223948740 - MLT1K LTR MaLR -6 582 366 * 1622 191 39 95 chr2 26739110 26739596 -223948258 + MLT1D LTR MaLR 47 505 0 1380 119 86 8 chr2 26739687 26739930 -223947924 + MER21A LTR ERV1 1 262 -669 2599 125 77 93 chr2 26739938 26740133 -223947721 + MER21A LTR ERV1 377 574 -357 2363 71 13 7 chr2 26740133 26740443 -223947411 - AluSx SINE Alu 0 312 1 2599 125 77 93 chr2 26740443 26740805 -223947049 + MER21A LTR ERV1 574 925 -6 437 19 0 0 chr2 26740878 26740931 -223946923 + MADE1 DNA Mariner 27 79 -1 290 162 0 121 chr2 26741024 26741123 -223946731 - L1ME3A LINE L1 0 6170 6084 256 154 3 0 chr2 26741192 26741246 -223946608 - AluSq SINE Alu -7 296 251 2082 79 0 0 chr2 26741246 26741511 -223946343 - AluSq SINE Alu -48 265 1 527 225 137 0 chr2 26741511 26741693 -223946161 - L1ME3A LINE L1 -195 5975 5769 416 123 15 0 chr2 26741704 26741769 -223946085 - MER41A LTR ERV1 -89 465 400 1667 161 0 20 chr2 26741904 26742065 -223945789 - AluJb SINE Alu -19 293 139 2322 96 0 0 chr2 26742065 26742366 -223945488 - AluSc SINE Alu -8 301 1 1667 161 0 20 chr2 26742366 26742503 -223945351 - AluJb SINE Alu -173 139 1 219 125 0 0 chr2 26742575 26742615 -223945239 + (TA)n Simple_repeat Simple_repeat 2 41 0 577 139 20 50 chr2 26742633 26742734 -223945120 + AluJo/FLAM SINE Alu 20 117 -195 809 109 0 0 chr2 26742736 26742872 -223944982 - AluSg/x SINE Alu 0 308 173 23 33 0 0 chr2 26742883 26742913 -223944941 + AT_rich Low_complexity Low_complexity 1 30 0 2261 87 3 0 chr2 26744095 26744393 -223943461 - AluSx SINE Alu -11 301 3 597 149 18 26 chr2 26744407 26744521 -223943333 - MER65A LTR ERV1 -268 177 65 2254 87 7 0 chr2 26744525 26744824 -223943030 - AluSx SINE Alu -7 305 5 2306 86 3 0 chr2 26744909 26745211 -223942643 - AluSp SINE Alu -10 303 1 2198 89 0 35 chr2 26745240 26745554 -223942300 + AluSx SINE Alu 2 304 -8 183 297 0 0 chr2 26745581 26745618 -223942236 - L3 LINE CR1 -104 1473 1437 317 282 27 27 chr2 26745677 26745787 -223942067 + L1MC4 LINE L1 6609 6718 -1324 1841 156 7 0 chr2 26745836 26746138 -223941716 - AluJb SINE Alu -8 304 1 2464 111 47 43 chr2 26746204 26746596 -223941258 - MER65A LTR ERV1 0 445 49 2143 100 13 0 chr2 26746596 26746895 -223940959 - AluSq SINE Alu -10 303 1 2464 111 47 43 chr2 26746895 26746945 -223940909 - MER65A LTR ERV1 -396 49 1 1193 177 52 20 chr2 26746986 26747234 -223940620 - AluJo SINE Alu -36 276 21 2762 72 8 44 chr2 26747403 26747792 -223940062 - THE1C LTR MaLR 0 375 1 728 186 0 0 chr2 26748822 26748940 -223938914 - FLAM_C SINE Alu -15 118 1 31 0 0 0 chr2 26748947 26748978 -223938876 + AT_rich Low_complexity Low_complexity 1 31 0 202 224 0 0 chr2 26748993 26749042 -223938812 + A-rich Low_complexity Low_complexity 1 49 0 356 191 29 59 chr2 26749042 26749110 -223938744 - Alu SINE Alu -13 289 234 1506 191 29 0 chr2 26749157 26749460 -223938394 + AluJb SINE Alu 1 311 0 287 108 0 0 chr2 26749460 26749497 -223938357 - FLAM_A SINE Alu -13 120 84 1927 128 0 47 chr2 26750381 26750702 -223937152 - AluSx SINE Alu -6 306 1 794 143 8 8 chr2 26750718 26750844 -223937010 - FLAM_C SINE Alu -16 127 2 1392 178 7 43 chr2 26750892 26751196 -223936658 - AluJb SINE Alu -19 293 1 1293 221 136 57 chr2 26751337 26751423 -223936431 + MER34B LTR ERV1 1 79 -486 2182 100 0 13 chr2 26751423 26751709 -223936145 + AluSx SINE Alu 1 284 -28 225 0 0 0 chr2 26751709 26751734 -223936120 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 2182 100 0 13 chr2 26751734 26751746 -223936108 + AluSx SINE Alu 284 295 -17 1293 221 136 57 chr2 26751746 26752183 -223935671 + MER34B LTR ERV1 79 565 0 998 162 0 0 chr2 26752742 26752909 -223934945 - AluJb SINE Alu -6 306 140 431 280 120 13 chr2 26752992 26753217 -223934637 + MIR SINE MIR 11 259 -3 247 289 97 18 chr2 26754567 26754681 -223933173 - MIR SINE MIR -80 182 60 1929 118 0 0 chr2 26754981 26755261 -223932593 - AluSx SINE Alu -7 305 26 1813 78 0 0 chr2 26755905 26756150 -223931704 + AluY SINE Alu 1 245 -66 4388 136 74 35 chr2 26756150 26757411 -223930443 + pTR5 LTR ERV1 743 2399 -39 538 46 0 130 chr2 26757411 26757519 -223930335 + AluYa5/8 SINE Alu 218 311 0 36 23 0 0 chr2 26757619 26757662 -223930192 + GC_rich Low_complexity Low_complexity 1 43 0 1978 98 0 0 chr2 26757935 26758210 -223929644 - AluSx SINE Alu -5 307 33 1058 120 44 0 chr2 26758238 26758396 -223929458 - AluJo SINE Alu -1 301 137 2006 98 0 21 chr2 26759316 26759601 -223928253 - AluSc SINE Alu -30 279 1 386 285 81 12 chr2 26759940 26760112 -223927742 + L1ME LINE L1 5567 5750 -371 513 263 165 46 chr2 26760118 26760513 -223927341 - LTR67 LTR ERVL -6 551 110 2097 91 3 3 chr2 26761212 26761498 -223926356 + AluSg SINE Alu 1 286 -24 848 213 77 5 chr2 26761547 26761768 -223926086 - LTR37A LTR ERV1 -13 413 177 805 139 25 0 chr2 26761941 26762063 -223925791 - AluJo SINE Alu -184 128 4 1944 168 83 13 chr2 26762063 26762461 -223925393 - MLT1C LTR MaLR -39 428 3 2176 92 3 22 chr2 26762473 26762787 -223925067 + AluSc SINE Alu 1 308 -1 2255 156 38 0 chr2 26762791 26763162 -223924692 - MER57A LTR ERV1 -18 385 1 307 190 76 13 chr2 26763286 26763365 -223924489 - MER31-int LTR ERV1 -749 4187 4104 1630 179 0 0 chr2 26763472 26763745 -223924109 - AluJb SINE Alu -37 275 3 379 314 32 54 chr2 26763817 26764002 -223923852 - MER31-int LTR ERV1 -918 4018 3838 1990 126 0 3 chr2 26764075 26764376 -223923478 + AluSx SINE Alu 1 300 -12 825 211 6 0 chr2 26764664 26764839 -223923015 - FRAM SINE Alu -4 172 1 2127 84 11 0 chr2 26765074 26765360 -223922494 + AluY SINE Alu 1 289 -22 931 196 0 0 chr2 26765371 26765534 -223922320 + AluJb SINE Alu 137 299 -13 2134 113 0 7 chr2 26765539 26765840 -223922014 + AluSx SINE Alu 1 299 -13 1788 146 0 29 chr2 26765842 26766157 -223921697 + AluJo SINE Alu 5 310 -2 27 0 0 0 chr2 26766180 26766207 -223921647 + AT_rich Low_complexity Low_complexity 1 27 0 335 270 7 40 chr2 26766230 26766378 -223921476 - MER31-int LTR ERV1 -2171 2765 2623 1901 133 3 7 chr2 26766541 26766835 -223921019 + AluSx SINE Alu 1 293 -19 1431 186 128 38 chr2 26767073 26767439 -223920415 + Charlie1b DNA MER1_type 6 404 -119 839 132 0 0 chr2 26767477 26767598 -223920256 - FLAM_C SINE Alu -22 121 1 385 163 109 11 chr2 26767609 26767701 -223920153 + Charlie1b DNA MER1_type 423 523 0 2054 117 0 13 chr2 26767723 26768030 -223919824 - AluSg SINE Alu -7 303 1 22 0 0 0 chr2 26768425 26768447 -223919407 + AT_rich Low_complexity Low_complexity 1 22 0 1178 84 0 13 chr2 26768457 26768611 -223919243 - AluSx SINE Alu -155 157 6 534 232 0 0 chr2 26768663 26768775 -223919079 + FRAM SINE Alu 65 176 0 1105 73 0 0 chr2 26769395 26769532 -223918322 - AluSq/x SINE Alu -175 137 1 2116 112 0 10 chr2 26770434 26770730 -223917124 + AluSx SINE Alu 1 293 -19 218 308 132 0 chr2 26770767 26770858 -223916996 + MIR SINE MIR 28 130 -132 742 135 0 0 chr2 26771494 26771605 -223916249 - AluSx SINE Alu -10 302 192 995 104 0 0 chr2 26771605 26771739 -223916115 - AluSx SINE Alu -172 140 7 402 186 40 90 chr2 26771957 26772134 -223915720 + MER69 DNA AcHobo 2046 2213 -313 290 299 110 7 chr2 26772155 26772309 -223915545 + MLT1L LTR MaLR 369 538 -77 2000 120 7 0 chr2 26772315 26772615 -223915239 + AluSx SINE Alu 4 305 -7 226 176 118 24 chr2 26772690 26772775 -223915079 + MER69 DNA AcHobo 2229 2321 -205 864 243 52 22 chr2 26772775 26773043 -223914811 - L1MCb LINE L1 -5686 359 84 2002 128 3 0 chr2 26773047 26773343 -223914511 - AluSq SINE Alu -16 297 1 185 306 32 51 chr2 26773376 26773533 -223914321 - L2 LINE L2 -286 2986 2833 247 244 0 0 chr2 26773659 26773704 -223914150 - L2 LINE L2 -17 3255 3211 198 0 0 0 chr2 26773715 26773737 -223914117 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 1844 86 0 4 chr2 26774084 26774328 -223913526 - AluSx SINE Alu -56 256 14 9051 186 39 42 chr2 26774369 26774948 -223912906 + L1MC2 LINE L1 2860 3439 -2905 730 178 0 0 chr2 26774948 26775066 -223912788 + FLAM_C SINE Alu 1 118 -15 9051 186 39 42 chr2 26775066 26775123 -223912731 + L1MC2 LINE L1 3439 3495 -2849 1716 168 3 7 chr2 26775123 26775415 -223912439 + AluJb SINE Alu 3 293 -19 9051 186 39 42 chr2 26775415 26775989 -223911865 + L1MC2 LINE L1 3495 4069 -2275 2220 94 0 7 chr2 26775989 26776298 -223911556 + AluSq SINE Alu 1 307 -6 9051 186 39 42 chr2 26776298 26776816 -223911038 + L1MC2 LINE L1 4069 4587 -1757 2053 108 7 0 chr2 26776816 26777113 -223910741 - AluSx SINE Alu -13 299 1 9051 186 39 42 chr2 26777113 26778717 -223909137 + L1MC2 LINE L1 4587 6184 -160 1604 161 0 30 chr2 26778717 26779015 -223908839 + AluJo SINE Alu 1 289 -23 9051 186 39 42 chr2 26779015 26779175 -223908679 + L1MC2 LINE L1 6184 6343 -1 213 283 45 101 chr2 26779316 26779514 -223908340 + L2 LINE L2 3126 3312 -1 2413 116 53 39 chr2 26780016 26780448 -223907406 + MER65A LTR ERV1 1 438 -7 1952 141 0 7 chr2 26780949 26781254 -223906600 - AluSx SINE Alu -9 303 1 228 182 0 0 chr2 26781506 26781550 -223906304 + CT-rich Low_complexity Low_complexity 1 44 0 1175 174 9 22 chr2 26781550 26781780 -223906074 - AluJo SINE Alu 0 312 86 186 233 14 96 chr2 26782497 26782523 -223905331 - MIR SINE MIR -42 220 193 2290 81 10 0 chr2 26782523 26782818 -223905036 - AluSq SINE Alu -14 299 2 186 233 14 96 chr2 26782818 26782864 -223904990 - MIR SINE MIR -69 193 154 380 322 67 34 chr2 26782925 26783164 -223904690 - MIR SINE MIR -1 261 15 577 297 94 5 chr2 26783581 26783783 -223904071 + MIR SINE MIR 3 222 -40 2195 122 0 0 chr2 26783791 26784103 -223903751 - AluSx SINE Alu 0 312 1 540 200 105 0 chr2 26784161 26784266 -223903588 + FLAM_C SINE Alu 1 116 -17 619 115 0 0 chr2 26784292 26784379 -223903475 + AluJ/FRAM SINE Alu 218 304 -8 1876 129 48 0 chr2 26784452 26784747 -223903107 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 26784774 26784795 -223903059 + AT_rich Low_complexity Low_complexity 1 21 0 183 226 0 57 chr2 26785037 26785090 -223902764 + MIR3 SINE MIR 118 167 -41 983 136 0 7 chr2 26785690 26785873 -223901981 - AluSg/x SINE Alu 0 308 127 2243 89 0 9 chr2 26785881 26786196 -223901658 - AluSx SINE Alu 0 312 1 2141 92 30 0 chr2 26786198 26786493 -223901361 - AluSp SINE Alu -9 304 1 1537 203 3 7 chr2 26786495 26786790 -223901064 - AluJb SINE Alu -18 294 1 495 259 87 40 chr2 26787088 26787327 -223900527 + MIR SINE MIR 1 243 -19 226 137 0 98 chr2 26787873 26787924 -223899930 + Tigger5 DNA MER2_type 1266 1311 -1012 387 343 50 11 chr2 26787924 26788105 -223899749 - MIR SINE MIR -55 207 20 22 0 0 0 chr2 26789808 26789830 -223898024 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 26791891 26791912 -223895942 + GC_rich Low_complexity Low_complexity 1 21 0 368 271 0 66 chr2 26792936 26793058 -223894796 - L1MC4 LINE L1 -1336 6706 6593 2111 94 3 17 chr2 26793654 26793951 -223893903 + AluSx SINE Alu 1 293 -19 428 234 66 36 chr2 26794676 26794712 -223893142 + MIR SINE MIR 121 154 -108 562 113 0 0 chr2 26794712 26794792 -223893062 + MADE1 DNA Mariner 1 80 0 428 234 66 36 chr2 26794792 26794892 -223892962 + MIR SINE MIR 154 261 -1 357 246 184 18 chr2 26795425 26795539 -223892315 - MIR SINE MIR -93 169 37 1178 202 30 11 chr2 26795569 26795831 -223892023 - MLT2C1 LTR ERVL -11 386 120 1176 179 9 5 chr2 26795834 26796052 -223891802 + AluJb SINE Alu 85 303 -9 717 144 17 0 chr2 26796052 26796170 -223891684 - MLT2C1 LTR ERVL -272 125 6 1932 150 6 13 chr2 26796170 26796484 -223891370 + AluSx SINE Alu 1 312 0 2281 97 3 0 chr2 26796800 26797111 -223890743 - AluSx SINE Alu 0 312 1 2122 97 0 3 chr2 26797142 26797432 -223890422 + AluSg SINE Alu 2 290 -20 418 196 147 0 chr2 26798083 26798185 -223889669 - L1ME3A LINE L1 -12 6158 6042 239 188 62 0 chr2 26798185 26798233 -223889621 + MER57A LTR ERV1 295 345 -58 1226 246 131 12 chr2 26798260 26798687 -223889167 - L1ME3A LINE L1 -114 6056 5579 298 61 76 0 chr2 26798879 26798945 -223888909 + (TA)n Simple_repeat Simple_repeat 2 72 0 273 463 0 0 chr2 26799077 26799185 -223888669 + polypyrimidine Low_complexity Low_complexity 1 108 0 25 0 0 0 chr2 26799393 26799418 -223888436 + AT_rich Low_complexity Low_complexity 1 25 0 2077 111 0 10 chr2 26799717 26800023 -223887831 + AluSx SINE Alu 1 303 -9 2467 53 0 0 chr2 26800633 26800933 -223886921 - AluY SINE Alu -11 300 1 1562 157 23 33 chr2 26801036 26801336 -223886518 - AluJo SINE Alu -15 297 1 386 305 88 24 chr2 26801586 26801783 -223886071 - L1MB5 LINE L1 -319 5855 5638 352 253 96 34 chr2 26802451 26802597 -223885257 + MIR SINE MIR 50 204 -58 1066 261 82 61 chr2 26802929 26803369 -223884485 + L1MC4a LINE L1 5572 6020 -101 215 242 177 0 chr2 26803927 26803989 -223883865 - MIR3 SINE MIR -10 198 126 2025 225 140 22 chr2 26804209 26804715 -223883139 + MLT1E LTR MaLR 28 593 0 414 267 8 15 chr2 26804844 26804975 -223882879 + MER94 DNA DNA 3 132 -2 1442 158 3 67 chr2 26806012 26806309 -223881545 - L1MB8 LINE L1 -14 6164 5887 1705 177 0 7 chr2 26806423 26806722 -223881132 + AluJb SINE Alu 1 297 -15 2130 106 23 3 chr2 26807772 26808075 -223879779 - AluSg SINE Alu -1 309 1 439 270 185 40 chr2 26808549 26808770 -223879084 + MIR SINE MIR 5 256 -6 327 290 94 7 chr2 26808793 26808931 -223878923 - HAL1b LINE L1 0 1348 1199 243 0 0 0 chr2 26808932 26808959 -223878895 + (CA)n Simple_repeat Simple_repeat 2 28 0 1029 85 7 0 chr2 26809009 26809162 -223878692 + L1MA4 LINE L1 6140 6293 -7 2344 84 0 7 chr2 26809186 26809494 -223878360 - AluSx SINE Alu -4 308 3 896 279 104 69 chr2 26809810 26809906 -223877948 - L1MB8 LINE L1 -744 5402 5311 2752 10 0 0 chr2 26809906 26810217 -223877637 - AluYa5 SINE Alu 0 311 1 896 279 104 69 chr2 26810217 26811391 -223876463 - L1MB8 LINE L1 -835 5311 4487 1921 153 0 0 chr2 26811427 26811727 -223876127 - AluJb SINE Alu -12 300 1 740 234 47 0 chr2 26811762 26811954 -223875900 - L1MB7 LINE L1 -13 6171 5971 2298 80 0 0 chr2 26812192 26812491 -223875363 + AluY SINE Alu 1 299 -12 380 290 101 42 chr2 26812492 26813036 -223874818 - L1MB8 LINE L1 -1945 4201 3626 841 113 47 33 chr2 26813040 26813190 -223874664 + FRAM SINE Alu 14 165 -11 703 172 94 0 chr2 26813391 26813519 -223874335 - MER3 DNA MER1_type -18 191 52 540 196 155 27 chr2 26813551 26813699 -223874155 + MER58C DNA MER1_type 49 215 0 293 241 46 19 chr2 26813707 26813815 -223874039 + MER113 DNA MER1_type? 1 111 -410 2028 112 7 0 chr2 26813917 26814203 -223873651 - AluSx SINE Alu -24 288 1 1071 208 162 25 chr2 26814233 26814627 -223873227 + MER113 DNA MER1_type? 74 521 0 2176 83 14 0 chr2 26814872 26815161 -223872693 + AluSg SINE Alu 1 293 -17 500 103 26 0 chr2 26815213 26815291 -223872563 + Alu SINE Alu 223 302 -8 708 184 61 114 chr2 26815640 26815868 -223871986 - L1ME1 LINE L1 -6 6160 5945 1111 156 38 0 chr2 26815873 26816059 -223871795 + MER20 DNA MER1_type 27 219 0 624 227 23 8 chr2 26816073 26816205 -223871649 + MER58 DNA MER1_type 3 136 -205 1289 99 0 16 chr2 26816225 26816407 -223871447 - MLT2B2 LTR ERVL -336 179 1 2421 196 94 79 chr2 26816409 26817544 -223870310 - L1ME1 LINE L1 -711 5467 4395 238 402 6 0 chr2 26818811 26818975 -223868879 - L2 LINE L2 -887 2427 2263 2127 106 7 0 chr2 26818975 26819278 -223868576 - AluSq SINE Alu -8 305 1 2294 66 7 3 chr2 26819424 26819728 -223868126 - AluSq SINE Alu -8 305 1 34 42 0 0 chr2 26819737 26819785 -223868069 + AT_rich Low_complexity Low_complexity 1 48 0 692 278 68 34 chr2 26820265 26821081 -223866773 - L1ME4a LINE L1 -223 5898 5023 230 329 45 78 chr2 26821297 26821540 -223866314 + L2 LINE L2 2953 3187 -85 832 131 0 29 chr2 26821807 26821944 -223865910 + FLAM_C SINE Alu 7 139 -4 1908 110 7 11 chr2 26822351 26822654 -223865200 - AluJb SINE Alu 0 302 1 181 303 232 10 chr2 26823301 26823400 -223864454 - L2 LINE L2 -5 3308 3188 276 246 0 15 chr2 26823414 26823479 -223864375 + MIR SINE MIR 118 181 -81 2445 74 0 0 chr2 26824272 26824583 -223863271 + AluY SINE Alu 1 311 0 1562 144 60 21 chr2 26824712 26824876 -223862978 - AluJo SINE Alu -16 296 115 423 38 0 0 chr2 26824876 26824929 -223862925 + (TG)n Simple_repeat Simple_repeat 2 54 0 1562 144 60 21 chr2 26824929 26825048 -223862806 - AluJo SINE Alu -197 115 2 21 0 0 0 chr2 26825050 26825071 -223862783 + AT_rich Low_complexity Low_complexity 1 21 0 2024 103 13 39 chr2 26825081 26825392 -223862462 + AluSx SINE Alu 1 303 -9 354 157 100 129 chr2 26825797 26825849 -223862005 - L1ME3A LINE L1 -224 5946 5894 2056 127 0 0 chr2 26825849 26826161 -223861693 - AluSx SINE Alu 0 312 1 354 157 100 129 chr2 26826161 26826247 -223861607 - L1ME3A LINE L1 -276 5894 5811 315 0 0 0 chr2 26826983 26827018 -223860836 + (CA)n Simple_repeat Simple_repeat 1 35 0 2191 104 3 3 chr2 26827379 26827687 -223860167 + AluSx SINE Alu 1 308 -4 863 45 22 15 chr2 26830626 26830760 -223857094 + (TTTC)n Simple_repeat Simple_repeat 1 135 0 1764 120 0 29 chr2 26830762 26831038 -223856816 - AluSx SINE Alu -44 268 1 1597 174 91 15 chr2 26831269 26831608 -223856246 - MLT1A1 LTR MaLR 0 365 1 2364 61 0 3 chr2 26831735 26832032 -223855822 - AluY SINE Alu -15 296 1 1623 181 43 51 chr2 26833121 26833514 -223854340 - MLT1B LTR MaLR 0 390 1 815 299 17 9 chr2 26833514 26833745 -223854109 + MIR SINE MIR 30 262 0 2040 134 0 0 chr2 26834143 26834435 -223853419 - AluSx SINE Alu -20 292 1 207 352 77 39 chr2 26834567 26834749 -223853105 + MIR SINE MIR 31 219 -43 705 158 71 24 chr2 26835018 26835145 -223852709 + FLAM_A SINE Alu 1 133 0 342 0 0 0 chr2 26835219 26835257 -223852597 + (GA)n Simple_repeat Simple_repeat 1 38 0 205 259 93 0 chr2 26836250 26836304 -223851550 - L2 LINE L2 -214 3058 3000 242 238 8 25 chr2 26836457 26836579 -223851275 + (TTA)n Simple_repeat Simple_repeat 3 122 0 403 245 51 0 chr2 26836891 26836989 -223850865 + MIR SINE MIR 104 206 -56 676 217 59 0 chr2 26837416 26837568 -223850286 - L1M4 LINE L1 -1143 5003 4843 1331 231 54 9 chr2 26837573 26837906 -223849948 - L1M4 LINE L1 -1368 4778 4431 5854 134 33 19 chr2 26837907 26838232 -223849622 - L1MA8 LINE L1 0 6291 5972 2250 104 0 0 chr2 26838232 26838540 -223849314 - AluSg1 SINE Alu -1 308 1 5854 134 33 19 chr2 26838540 26839387 -223848467 - L1MA8 LINE L1 -319 5972 5108 3444 200 45 8 chr2 26839439 26840219 -223847635 - L1M4 LINE L1 -1794 4352 3544 446 287 0 16 chr2 26840222 26840344 -223847510 + MER5B DNA MER1_type 43 162 -16 253 263 72 66 chr2 26841908 26842060 -223845794 + L2 LINE L2 3103 3255 -17 1921 204 161 21 chr2 26842522 26842703 -223845151 - L1ME3A LINE L1 -8 6162 6008 452 144 10 31 chr2 26842703 26842800 -223845054 - L1MB7 LINE L1 0 6184 6090 1921 204 161 21 chr2 26842800 26843178 -223844676 - L1ME3A LINE L1 -162 6008 5525 3900 106 3 25 chr2 26845083 26845525 -223842329 + MER41A LTR ERV1 1 430 -124 1814 126 0 7 chr2 26845525 26845795 -223842059 - AluSg SINE Alu -5 305 38 3900 106 3 25 chr2 26845795 26845918 -223841936 + MER41A LTR ERV1 430 554 0 180 0 0 0 chr2 26845958 26845978 -223841876 + (CAGCC)n Simple_repeat Simple_repeat 4 23 0 268 159 191 0 chr2 26847009 26847072 -223840782 - MIR3 SINE MIR -25 183 109 1986 128 0 3 chr2 26847084 26847382 -223840472 + AluJb SINE Alu 2 298 -14 312 314 0 0 chr2 26847736 26847822 -223840032 + MIR SINE MIR 170 255 -7 2050 199 91 56 chr2 26848234 26848649 -223839205 - MLT1E3 LTR MaLR 0 624 180 2238 88 0 0 chr2 26848649 26848944 -223838910 - AluSc SINE Alu -14 295 1 2050 199 91 56 chr2 26848944 26849131 -223838723 - MLT1E3 LTR MaLR -444 180 1 1693 171 0 20 chr2 26849224 26849529 -223838325 - AluJo SINE Alu -13 299 1 207 0 0 0 chr2 26849563 26849586 -223838268 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2122 104 3 0 chr2 26849588 26849876 -223837978 - AluSx SINE Alu -23 289 1 408 289 228 14 chr2 26850400 26850611 -223837243 + MIR SINE MIR 2 257 -5 26 0 0 0 chr2 26851910 26851936 -223835918 + AT_rich Low_complexity Low_complexity 1 26 0 1832 129 20 27 chr2 26851952 26852246 -223835608 + AluJo SINE Alu 6 297 -15 1848 220 255 16 chr2 26852341 26853056 -223834798 - L1ME1 LINE L1 -12 6154 5272 866 129 8 0 chr2 26853085 26853217 -223834637 - AluSq/x SINE Alu -180 133 1 2428 184 78 24 chr2 26853218 26853805 -223834049 - L1ME1 LINE L1 -864 5282 4664 249 250 150 0 chr2 26854644 26854724 -223833130 - MIR SINE MIR -110 152 61 275 227 84 130 chr2 26855463 26855537 -223832317 + MIR SINE MIR 110 175 -87 2894 130 26 49 chr2 26855537 26856068 -223831786 - L1MB3 LINE L1 -8 6175 5657 275 227 84 130 chr2 26856068 26856147 -223831707 + MIR SINE MIR 175 256 -6 561 143 0 0 chr2 26856700 26856784 -223831070 + AluJ/FLAM SINE Alu 1 84 -228 753 249 15 51 chr2 26856789 26857062 -223830792 - L1ME1 LINE L1 -1639 4507 4245 28 29 0 0 chr2 26857372 26857407 -223830447 + AT_rich Low_complexity Low_complexity 1 35 0 493 267 147 16 chr2 26857520 26857711 -223830143 - MER115 DNA AcHobo -477 216 1 915 44 35 0 chr2 26858336 26858450 -223829404 - AluSq/x SINE Alu -194 118 1 1874 144 3 0 chr2 26858896 26859188 -223828666 - AluSx SINE Alu -19 293 1 337 270 44 36 chr2 26859347 26859484 -223828370 - L1ME4a LINE L1 -21 6100 5963 32 57 0 0 chr2 26859613 26859666 -223828188 + AT_rich Low_complexity Low_complexity 1 53 0 283 257 145 7 chr2 26859668 26859820 -223828034 - L1ME4a LINE L1 -247 5915 5743 25 31 0 0 chr2 26860026 26860058 -223827796 + AT_rich Low_complexity Low_complexity 1 32 0 684 283 40 0 chr2 26861316 26861514 -223826340 + MER115 DNA AcHobo 488 693 0 1029 168 0 0 chr2 26862148 26862309 -223825545 + FRAM SINE Alu 1 161 -5 336 323 85 8 chr2 26862380 26862510 -223825344 - MIR SINE MIR -71 191 52 1943 125 10 0 chr2 26862631 26862919 -223824935 - AluSq SINE Alu -18 295 5 203 167 48 0 chr2 26863435 26863477 -223824377 + (TTATA)n Simple_repeat Simple_repeat 5 48 0 217 211 88 0 chr2 26864776 26864833 -223823021 - L2 LINE L2 0 3313 3252 818 128 21 21 chr2 26864871 26865012 -223822842 + LTR23 LTR ERV1 259 399 -38 236 257 125 29 chr2 26865651 26865787 -223822067 - L1ME LINE L1 -306 5815 5667 1652 139 4 25 chr2 26867501 26867775 -223820079 + AluJb SINE Alu 1 268 -44 264 167 0 0 chr2 26867792 26867840 -223820014 + (CA)n Simple_repeat Simple_repeat 2 49 0 195 42 0 0 chr2 26867840 26867864 -223819990 + (TG)n Simple_repeat Simple_repeat 2 25 0 1770 83 75 136 chr2 26868082 26868307 -223819547 + MER1B DNA MER1_type 1 197 -2515 2192 112 3 0 chr2 26868307 26868619 -223819235 - AluSq SINE Alu 0 313 1 1770 83 75 136 chr2 26868619 26868754 -223819100 + MER1B DNA MER1_type 197 339 0 960 149 17 23 chr2 26869447 26869622 -223818232 + MER20 DNA MER1_type 4 177 -42 1671 133 6 63 chr2 26869630 26869780 -223818074 + AluJo SINE Alu 1 125 -187 2355 74 0 0 chr2 26869780 26870077 -223817777 + AluY SINE Alu 1 297 -14 1671 133 6 63 chr2 26870077 26870241 -223817613 + AluJo SINE Alu 125 297 -15 288 0 0 0 chr2 26870257 26870289 -223817565 + (TG)n Simple_repeat Simple_repeat 1 32 0 265 336 8 22 chr2 26870540 26870674 -223817180 + CT-rich Low_complexity Low_complexity 5 136 0 2167 109 3 3 chr2 26871471 26871783 -223816071 + AluSx SINE Alu 1 312 0 1289 32 0 37 chr2 26871793 26871980 -223815874 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 182 313 52 52 chr2 26872406 26872521 -223815333 - MIR3 SINE MIR -89 119 5 407 277 29 22 chr2 26874145 26874282 -223813572 + MIR3 SINE MIR 37 174 -34 243 252 29 29 chr2 26874900 26875003 -223812851 + CT-rich Low_complexity Low_complexity 3 105 0 2226 98 0 13 chr2 26875150 26875455 -223812399 + AluSx SINE Alu 1 301 -11 2074 106 20 0 chr2 26876414 26876706 -223811148 + AluSq SINE Alu 1 298 -15 28 29 0 0 chr2 26876986 26877021 -223810833 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr2 26877125 26877160 -223810694 + AT_rich Low_complexity Low_complexity 1 35 0 1134 148 21 145 chr2 26877375 26877487 -223810367 - AluSx SINE Alu -6 296 172 342 0 0 0 chr2 26877487 26877525 -223810329 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1134 148 21 145 chr2 26877525 26877750 -223810104 - AluSx SINE Alu -130 172 1 1785 138 3 7 chr2 26878884 26879180 -223808674 - AluSx SINE Alu -14 298 4 365 300 36 18 chr2 26879578 26879688 -223808166 - MIR SINE MIR -63 145 34 1338 226 50 83 chr2 26880086 26880249 -223807605 - L1ME4a LINE L1 0 6121 5954 647 180 82 0 chr2 26880249 26880371 -223807483 - FLAM_C SINE Alu 0 133 2 1338 226 50 83 chr2 26880371 26880660 -223807194 - L1ME4a LINE L1 -167 5954 5657 216 0 0 0 chr2 26880660 26880684 -223807170 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2024 101 0 14 chr2 26880686 26880982 -223806872 - AluSc SINE Alu -17 292 1 1338 226 50 83 chr2 26880982 26881106 -223806748 - L1ME4a LINE L1 -465 5656 5560 1109 202 32 32 chr2 26881950 26882198 -223805656 - MLT1B LTR MaLR -142 248 1 902 158 7 26 chr2 26883155 26883307 -223804547 - AluJb SINE Alu -163 149 1 635 239 186 5 chr2 26883379 26883567 -223804287 - MIR SINE MIR -24 238 17 2182 98 17 3 chr2 26883755 26884050 -223803804 + AluSg SINE Alu 1 299 -11 311 306 0 0 chr2 26884135 26884207 -223803647 + (CA)n Simple_repeat Simple_repeat 1 72 0 565 250 14 29 chr2 26886394 26886534 -223801320 + MIR SINE MIR 7 144 -118 2010 99 8 0 chr2 26887239 26887502 -223800352 + AluSg SINE Alu 26 290 -20 2206 106 33 0 chr2 26887905 26888207 -223799647 - AluSx SINE Alu 0 312 1 297 293 41 0 chr2 26888246 26888369 -223799485 + L1M4 LINE L1 2716 2843 -3303 334 294 206 52 chr2 26888535 26889294 -223798560 + HAL1 LINE L1 8 897 -1610 1716 165 19 38 chr2 26889294 26889610 -223798244 + AluJb SINE Alu 1 310 -2 334 294 206 52 chr2 26889610 26889650 -223798204 + HAL1 LINE L1 897 930 -1577 1187 226 95 34 chr2 26889684 26890200 -223797654 + HAL1 LINE L1 1140 1756 -751 2272 106 3 7 chr2 26890200 26890502 -223797352 + AluSx SINE Alu 1 301 -11 1187 226 95 34 chr2 26890502 26890625 -223797229 + HAL1 LINE L1 1756 1870 -637 310 335 131 31 chr2 26890794 26891084 -223796770 - L3 LINE CR1 -1 1576 1258 665 200 8 0 chr2 26891136 26891256 -223796598 - MER5A DNA MER1_type -2 187 67 2209 122 0 0 chr2 26891256 26891551 -223796303 - AluSx SINE Alu -17 295 1 212 304 58 0 chr2 26892414 26892483 -223795371 - MIR SINE MIR -6 256 184 708 150 59 53 chr2 26893187 26893224 -223794630 + MER53 DNA DNA 2 37 -152 2506 39 0 0 chr2 26893224 26893541 -223794313 + AluY SINE Alu 1 317 0 708 150 59 53 chr2 26893541 26893687 -223794167 + MER53 DNA DNA 37 189 0 490 289 93 41 chr2 26893849 26894002 -223793852 + MIR SINE MIR 3 175 -87 2386 97 0 3 chr2 26894002 26894310 -223793544 + AluSx SINE Alu 1 307 -5 490 289 93 41 chr2 26894310 26894402 -223793452 + MIR SINE MIR 175 261 -1 2096 94 10 28 chr2 26894415 26894740 -223793114 + AluSx SINE Alu 1 320 0 692 206 8 8 chr2 26894852 26894983 -223792871 - FLAM_C SINE Alu -2 131 1 645 296 129 13 chr2 26895004 26895237 -223792617 - MIR SINE MIR 0 262 3 267 266 43 33 chr2 26895549 26895706 -223792148 - MIR SINE MIR -2 260 44 2449 92 0 0 chr2 26896292 26896595 -223791259 + AluSg SINE Alu 1 303 -7 37 69 0 0 chr2 26897053 26897125 -223790729 + AT_rich Low_complexity Low_complexity 1 72 0 905 173 26 42 chr2 26897180 26897352 -223790502 + AluJo SINE Alu 122 292 -20 1868 130 0 4 chr2 26897352 26897613 -223790241 + AluSx SINE Alu 1 260 -52 905 173 26 42 chr2 26897613 26897631 -223790223 + AluJo SINE Alu 292 309 -3 480 312 41 0 chr2 26897716 26897886 -223789968 - L2 LINE L2 -558 2756 2580 1914 157 14 0 chr2 26897927 26898221 -223789633 + AluJb SINE Alu 1 298 -14 1860 139 0 37 chr2 26898243 26898537 -223789317 + AluJo SINE Alu 14 296 -16 2103 117 0 0 chr2 26898592 26898896 -223788958 + AluSx SINE Alu 11 314 0 652 210 6 19 chr2 26898896 26899053 -223788801 + L1ME LINE L1 5228 5382 -764 418 228 57 24 chr2 26899120 26899243 -223788611 + MLT1F1 LTR MaLR 433 559 -8 328 158 0 0 chr2 26899250 26899307 -223788547 + L1MC4 LINE L1 7938 7994 -48 393 296 99 60 chr2 26900253 26900486 -223787368 - L2 LINE L2 -1 3271 3030 2342 82 3 7 chr2 26900897 26901200 -223786654 + AluSq SINE Alu 1 302 -11 2825 13 0 3 chr2 26904600 26904908 -223782946 - AluYb8 SINE Alu -11 307 1 347 269 65 9 chr2 26904999 26905107 -223782747 - MIR3 SINE MIR -14 194 81 193 219 0 24 chr2 26905174 26905215 -223782639 - MIR SINE MIR -131 77 38 21 0 0 0 chr2 26905396 26905417 -223782437 + AT_rich Low_complexity Low_complexity 1 21 0 720 294 21 5 chr2 26905691 26905878 -223781976 + MIR SINE MIR 23 212 -50 277 260 68 17 chr2 26907870 26908047 -223779807 + L1ME LINE L1 5584 5769 -352 1793 167 7 7 chr2 26910358 26910651 -223777203 + AluJo SINE Alu 6 298 -14 404 255 116 55 chr2 26911415 26911817 -223776037 - L1ME3 LINE L1 -196 5966 5548 441 271 40 99 chr2 26913008 26913159 -223774695 - MER91A DNA MER1_type -54 142 1 180 239 22 0 chr2 26913817 26913863 -223773991 + L2 LINE L2 3267 3313 0 257 291 68 8 chr2 26915612 26915729 -223772125 - L1ME4a LINE L1 -53 6068 5945 322 262 37 28 chr2 26915730 26915837 -223772017 - L1ME4a LINE L1 -2 6119 6012 1077 173 239 30 chr2 26917011 26917380 -223770474 + MLT1D LTR MaLR 60 505 0 * 1207 154 35 27 chr2 26917380 26917705 -223770149 - MLT1D LTR MaLR -112 393 24 2517 87 0 3 chr2 26918678 26918990 -223768864 + AluSq SINE Alu 1 311 -2 300 265 154 19 chr2 26919991 26920153 -223767701 + MER5A DNA MER1_type 5 188 -1 199 218 91 18 chr2 26921117 26921172 -223766682 + MIR SINE MIR 2 60 -202 * 267 230 111 87 chr2 26921138 26921220 -223766634 + MER5A DNA MER1_type 61 148 -41 1720 175 24 0 chr2 26921220 26921511 -223766343 + AluJo SINE Alu 1 298 -14 267 230 111 87 chr2 26921511 26921554 -223766300 + MER5A DNA MER1_type 148 189 0 188 317 12 85 chr2 26921620 26921784 -223766070 + L2 LINE L2 2910 3061 -211 21 36 0 0 chr2 26922040 26922068 -223765786 + AT_rich Low_complexity Low_complexity 1 28 0 263 315 67 27 chr2 26922136 26922285 -223765569 + L2 LINE L2 3109 3263 -9 2304 70 14 3 chr2 26922299 26922586 -223765268 + AluY SINE Alu 1 290 -21 275 89 0 0 chr2 26923553 26923598 -223764256 - AluSp/q SINE Alu -6 297 253 24 0 0 0 chr2 26923902 26923926 -223763928 + AT_rich Low_complexity Low_complexity 1 24 0 2248 104 7 3 chr2 26924462 26924761 -223763093 + AluSq SINE Alu 1 300 -13 1328 150 0 54 chr2 26926190 26926430 -223761424 - AluJo SINE Alu -1 311 85 840 152 7 7 chr2 26926430 26926581 -223761273 - MER58B DNA MER1_type -10 331 181 1382 184 15 31 chr2 26926732 26927058 -223760796 + L1MC4 LINE L1 6794 7114 -928 537 16 0 0 chr2 26927155 26927217 -223760637 + (TG)n Simple_repeat Simple_repeat 2 63 0 1735 161 3 14 chr2 26927490 26927830 -223760024 - AluJo SINE Alu 0 337 1 1856 79 55 62 chr2 26927895 26928216 -223759638 + AluY SINE Alu 1 311 0 2560 60 0 0 chr2 26928452 26928751 -223759103 - AluY SINE Alu -11 300 2 213 283 0 0 chr2 26929817 26929870 -223757984 + MER5B DNA MER1_type 3 55 -123 225 256 0 110 chr2 26930567 26930649 -223757205 + L2 LINE L2 3107 3179 -93 184 348 130 9 chr2 26930835 26930950 -223756904 - L2 LINE L2 -5 3308 3180 1708 103 96 11 chr2 26930962 26931258 -223756596 - AluSx SINE Alu 0 321 4 378 213 28 46 chr2 26932057 26932165 -223755689 - MER5A DNA MER1_type -80 109 4 630 274 238 7 chr2 26932387 26932800 -223755054 - Charlie8 DNA MER1_type -2264 153 27 325 329 125 38 chr2 26932827 26932982 -223754872 - L2 LINE L2 -567 2747 2607 1760 162 36 12 chr2 26932982 26933316 -223754538 - MER2 DNA MER2_type 0 344 3 325 329 125 38 chr2 26933316 26933585 -223754269 - L2 LINE L2 -707 2607 2286 415 309 119 32 chr2 26933606 26934135 -223753719 + L2 LINE L2 2696 3267 -5 2084 159 8 17 chr2 26934493 26934844 -223753010 - MER7A DNA MER2_type 0 346 1 537 273 97 31 chr2 26935007 26935234 -223752620 + MIR SINE MIR 21 262 0 248 148 548 0 chr2 26938164 26938279 -223749575 - MIR3 SINE MIR -23 185 8 281 222 185 30 chr2 26939898 26940033 -223747821 - MIR3 SINE MIR -15 193 38 2165 163 36 71 chr2 26940462 26940562 -223747292 + MLT1D LTR MaLR 1 103 -402 2115 128 10 7 chr2 26940562 26940868 -223746986 + AluJb SINE Alu 1 307 -5 2165 163 36 71 chr2 26940868 26941000 -223746854 + MLT1D LTR MaLR 103 238 -267 1977 163 7 0 chr2 26941000 26941295 -223746559 + AluJb SINE Alu 1 297 -15 2165 163 36 71 chr2 26941295 26941584 -223746270 + MLT1D LTR MaLR 238 505 0 376 319 132 14 chr2 26941836 26941980 -223745874 + L2 LINE L2 3112 3272 0 2127 113 115 36 chr2 26942551 26942942 -223744912 - MSTA LTR MaLR -6 422 1 2211 103 10 10 chr2 26943096 26943406 -223744448 - AluSq SINE Alu -1 312 3 1713 129 75 7 chr2 26943910 26944190 -223743664 + AluJb SINE Alu 1 299 -13 1961 97 0 32 chr2 26944442 26944721 -223743133 + AluSx SINE Alu 1 270 -42 24 0 0 0 chr2 26944965 26944989 -223742865 + GC_rich Low_complexity Low_complexity 1 24 0 237 310 0 0 chr2 26945559 26945617 -223742237 + MIR SINE MIR 183 240 -22 918 184 0 76 chr2 26945656 26945724 -223742130 + MER45A DNA AcHobo 6 78 -1503 2357 104 3 3 chr2 26945724 26946033 -223741821 - AluSx SINE Alu -3 309 1 918 184 0 76 chr2 26946033 26946149 -223741705 + MER45A DNA AcHobo 78 176 -2 937 279 33 4 chr2 26946667 26946911 -223740943 + MIR SINE MIR 2 252 -10 216 283 43 33 chr2 26947531 26947623 -223740231 - L2 LINE L2 -545 2769 2677 297 164 164 0 chr2 26947921 26947982 -223739872 - MIR SINE MIR -74 188 118 191 170 64 85 chr2 26948451 26948498 -223739356 + MER5A DNA MER1_type 31 76 -113 213 344 11 11 chr2 26948521 26948611 -223739243 + MIR SINE MIR 11 100 -162 295 312 233 6 chr2 26948612 26948968 -223738886 - L2 LINE L2 -870 2444 2008 279 232 93 119 chr2 26950199 26950278 -223737576 - MIR SINE MIR -6 256 181 2898 131 26 49 chr2 26950278 26950812 -223737042 + L1MB3 LINE L1 5657 6178 -5 279 232 93 119 chr2 26950812 26950883 -223736971 - MIR SINE MIR -81 181 110 252 250 150 0 chr2 26951622 26951702 -223736152 + MIR SINE MIR 61 152 -110 2294 185 78 25 chr2 26952541 26953129 -223734725 + L1ME1 LINE L1 4664 5282 -864 930 129 8 0 chr2 26953130 26953262 -223734592 + AluSq/x SINE Alu 1 133 -180 647 223 69 19 chr2 26953291 26954006 -223733848 + L1ME1 LINE L1 5272 6154 -12 1977 129 20 27 chr2 26954101 26954395 -223733459 - AluJo SINE Alu -15 297 6 26 0 0 0 chr2 26954411 26954437 -223733417 + AT_rich Low_complexity Low_complexity 1 26 0 404 289 228 14 chr2 26955736 26955947 -223731907 - MIR SINE MIR -5 257 2 2378 113 3 0 chr2 26956471 26956782 -223731072 + AluSx SINE Alu 1 312 0 208 368 56 7 chr2 26956884 26957028 -223730826 + MIR SINE MIR 2 152 -110 198 0 0 0 chr2 26958107 26958129 -223729725 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 236 349 67 0 chr2 26958443 26958592 -223729262 - MIR SINE MIR -69 193 35 703 321 80 0 chr2 26959777 26960001 -223727853 - MIR SINE MIR -9 253 12 1700 108 0 0 chr2 26960343 26960556 -223727298 - AluSx SINE Alu -99 213 1 23 33 0 0 chr2 26960927 26960957 -223726897 + AT_rich Low_complexity Low_complexity 1 30 0 250 345 129 6 chr2 26961022 26961193 -223726661 - L2 LINE L2 -1275 2039 1848 2312 112 0 3 chr2 26961379 26961684 -223726170 + AluSq SINE Alu 3 306 -7 210 360 67 54 chr2 26962089 26962328 -223725526 - L2 LINE L2 -27 3245 3004 225 221 150 44 chr2 26962419 26962532 -223725322 - L2 LINE L2 -454 2860 2736 1976 193 87 60 chr2 26962733 26963366 -223724488 - L1MD2 LINE L1 -11 6348 5699 823 158 8 15 chr2 26963678 26963811 -223724043 - FLAM_A SINE Alu -1 132 1 1620 296 73 32 chr2 26964122 26964974 -223722880 + MER110-int LTR ERV1 151 3185 -3616 1163 243 23 40 chr2 26964975 26965386 -223722468 + MER34B LTR ERV1 4 464 -101 1926 168 0 10 chr2 26965386 26965696 -223722158 + AluJo SINE Alu 1 307 -5 1163 243 23 40 chr2 26965696 26965793 -223722061 + MER34B LTR ERV1 464 561 -4 2606 61 0 0 chr2 26965908 26966219 -223721635 - AluY SINE Alu 0 311 1 370 335 6 23 chr2 26966229 26966402 -223721452 + MER110-int LTR ERV1 3304 3473 -3328 396 189 151 82 chr2 26966603 26966762 -223721092 - L2 LINE L2 -787 2527 2358 271 237 252 14 chr2 26966763 26967085 -223720769 - L1ME LINE L1 -242 5879 5484 376 325 24 8 chr2 26967090 26967213 -223720641 - L1ME LINE L1 -656 5465 5341 429 141 165 12 chr2 26967463 26967548 -223720306 + AluJo SINE Alu 87 184 -128 189 194 65 129 chr2 26967918 26968011 -223719843 + MIR SINE MIR 57 143 -119 274 213 15 8 chr2 26968045 26968136 -223719718 + L1P LINE L1 5322 5411 -740 185 378 71 0 chr2 26968141 26968239 -223719615 + MIR SINE MIR 154 258 -4 762 263 99 28 chr2 26969602 26969925 -223717929 + L1ME4a LINE L1 5500 5845 -276 387 303 43 6 chr2 26970080 26970242 -223717612 + MLT1J LTR MaLR 342 509 -2 560 219 47 0 chr2 26970288 26970416 -223717438 + MER7A DNA MER2_type 1 132 -214 347 203 0 0 chr2 26970468 26970532 -223717322 - AluJ/FRAM SINE Alu -22 280 217 259 141 31 0 chr2 26970544 26970608 -223717246 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 800 214 0 14 chr2 26970612 26970757 -223717097 - FRAM SINE Alu -32 144 2 1531 131 17 0 chr2 26970760 26970996 -223716858 + MER7A DNA MER2_type 97 336 0 344 242 54 7 chr2 26971028 26971177 -223716677 + L1ME4a LINE L1 5965 6120 -1 207 265 31 41 chr2 26971592 26971690 -223716164 + CT-rich Low_complexity Low_complexity 4 100 0 2381 89 6 16 chr2 26972316 26972632 -223715222 + AluSp SINE Alu 1 313 0 233 297 126 34 chr2 26973138 26973313 -223714541 + L3 LINE CR1 730 920 -657 282 263 161 106 chr2 26973329 26973565 -223714289 + L2 LINE L2 3019 3267 -5 * 445 238 40 0 chr2 26973563 26973664 -223714190 - MIR SINE MIR -137 125 21 * 912 291 35 95 chr2 26973661 26974263 -223713591 + L3 LINE CR1 1011 1576 -1 1397 138 75 48 chr2 26974437 26974643 -223713211 + MER1B DNA MER1_type 1 217 -2495 1460 119 50 0 chr2 26974643 26974862 -223712992 + MER30 DNA MER1_type 1 230 0 1397 138 75 48 chr2 26974862 26974923 -223712931 + MER1B DNA MER1_type 217 275 -64 2206 86 65 0 chr2 26975739 26976029 -223711825 - AluSx SINE Alu -3 309 1 478 222 24 32 chr2 26977354 26977480 -223710374 - MIR SINE MIR -89 173 49 283 344 38 0 chr2 26980543 26980674 -223707180 - MIR SINE MIR -111 151 16 1371 146 15 131 chr2 26984656 26984992 -223702862 - AluJo SINE Alu -5 297 1 2247 93 0 3 chr2 26985364 26985664 -223702190 - AluSq SINE Alu -14 299 1 5191 149 60 30 chr2 26985666 26986107 -223701747 - L1MC2 LINE L1 -13 6331 5905 2206 115 0 0 chr2 26986107 26986412 -223701442 - AluSx SINE Alu -7 305 1 5191 149 60 30 chr2 26986412 26986967 -223700887 - L1MC2 LINE L1 -439 5905 5294 1378 178 85 24 chr2 26986967 26987260 -223700594 - AluJo SINE Alu -1 311 1 5191 149 60 30 chr2 26987260 26987354 -223700500 - L1MC2 LINE L1 -1050 5294 5204 2263 96 0 0 chr2 26987566 26987867 -223699987 - AluY SINE Alu -10 301 1 1702 132 64 10 chr2 26987944 26988239 -223699615 - AluSx SINE Alu -1 311 1 1801 164 0 7 chr2 26988239 26988543 -223699311 - AluJb SINE Alu -8 304 3 2831 206 24 72 chr2 26988551 26989082 -223698772 - L1 LINE L1 -1773 4373 3903 2207 93 23 0 chr2 26989082 26989382 -223698472 - AluSx SINE Alu -5 307 1 2831 206 24 72 chr2 26989382 26989767 -223698087 - L1 LINE L1 -2243 3903 3501 2163 92 10 0 chr2 26989767 26990070 -223697784 - AluSx SINE Alu -6 306 1 842 110 12 61 chr2 26990070 26990233 -223697621 - AluSg/x SINE Alu -22 290 136 1990 87 30 10 chr2 26990235 26990534 -223697320 - AluSq SINE Alu -8 305 1 182 261 15 31 chr2 26990722 26990787 -223697067 - MIR SINE MIR -111 97 34 555 11 0 178 chr2 26991918 26992008 -223695846 + tRNA-Tyr-TAC tRNA tRNA 1 74 -2 555 55 14 0 chr2 26992351 26992424 -223695430 + tRNA-Ala-GCA tRNA tRNA 1 74 -2 208 143 48 63 chr2 26992960 26993023 -223694831 + (CCCCAG)n Simple_repeat Simple_repeat 3 64 0 1301 89 0 0 chr2 26996723 26996892 -223690962 + AluSp SINE Alu 135 303 -10 1918 102 4 8 chr2 26997669 26997933 -223689921 + AluSx SINE Alu 1 263 -49 2099 131 0 0 chr2 26999708 27000006 -223687848 + AluSx SINE Alu 1 298 -14 270 333 121 6 chr2 27000659 27000824 -223687030 - MIR SINE MIR 0 262 79 2028 137 3 13 chr2 27000892 27001072 -223686782 - AluSx SINE Alu 0 312 135 2339 82 3 0 chr2 27001072 27001375 -223686479 - AluSg SINE Alu -6 304 1 2028 137 3 13 chr2 27001375 27001509 -223686345 - AluSx SINE Alu -177 135 1 2022 125 7 7 chr2 27001655 27001952 -223685902 - AluSq SINE Alu -12 301 5 2246 92 3 10 chr2 27001961 27002267 -223685587 - AluSp SINE Alu -9 304 1 283 296 0 0 chr2 27003045 27003116 -223684738 + L2 LINE L2 3242 3312 -1 2434 53 0 10 chr2 27003152 27003454 -223684400 + AluY SINE Alu 1 299 -12 1678 137 50 20 chr2 27004130 27004429 -223683425 - AluJb SINE Alu -3 309 2 2183 83 13 3 chr2 27004594 27004895 -223682959 - AluSx SINE Alu -8 304 1 234 330 43 26 chr2 27005318 27005433 -223682421 - L2 LINE L2 -15 3257 3141 251 232 244 0 chr2 27005433 27005515 -223682339 - MIR SINE MIR -1 261 160 1628 148 94 0 chr2 27005819 27006096 -223681758 + AluJb SINE Alu 1 303 -9 1762 139 16 29 chr2 27006504 27006640 -223681214 + AluJb SINE Alu 1 137 -175 2182 92 3 13 chr2 27006640 27006944 -223680910 + AluSg SINE Alu 1 301 -9 1762 139 16 29 chr2 27006944 27007116 -223680738 + AluJb SINE Alu 137 305 -7 302 208 125 0 chr2 27007662 27007734 -223680120 - MIR SINE MIR 0 262 182 1094 179 14 19 chr2 27008195 27008407 -223679447 + MER20 DNA MER1_type 9 219 0 289 270 147 37 chr2 27013152 27013216 -223674638 - MIR3 SINE MIR -4 204 148 2118 119 20 0 chr2 27013216 27013518 -223674336 + AluSx SINE Alu 1 308 -4 289 270 147 37 chr2 27013518 27013616 -223674238 - MIR3 SINE MIR -60 148 24 2191 107 3 0 chr2 27014206 27014505 -223673349 - AluSx SINE Alu -12 300 1 206 178 0 44 chr2 27014809 27014854 -223673000 + (CCA)n Simple_repeat Simple_repeat 3 45 0 938 108 20 7 chr2 27015446 27015458 -223672396 - AluSq/x SINE Alu -163 150 140 1923 128 14 0 chr2 27015458 27015748 -223672106 - AluSx SINE Alu -18 294 1 938 108 20 7 chr2 27015748 27015883 -223671971 - AluSq/x SINE Alu -173 140 1 202 288 27 27 chr2 27016073 27016184 -223671670 + L2 LINE L2 2305 2415 -899 623 239 42 7 chr2 27016601 27016743 -223671111 - MIR SINE MIR 0 262 116 2296 90 0 0 chr2 27017496 27017796 -223670058 - AluSg SINE Alu -10 300 1 461 304 8 0 chr2 27017930 27018055 -223669799 + MIR3 SINE MIR 60 185 -23 241 200 0 67 chr2 27018660 27018735 -223669119 + GA-rich Low_complexity Low_complexity 5 74 0 426 53 0 0 chr2 27020949 27021006 -223666848 + (TG)n Simple_repeat Simple_repeat 1 57 0 209 284 81 0 chr2 27021474 27021548 -223666306 - MIR SINE MIR -80 182 103 397 317 19 37 chr2 27021568 27021729 -223666125 + MIR SINE MIR 20 177 -85 186 43 0 0 chr2 27022237 27022260 -223665594 + (CCCCAG)n Simple_repeat Simple_repeat 6 28 0 474 214 95 8 chr2 27025307 27025433 -223662421 - L2 LINE L2 0 3272 3136 279 0 0 0 chr2 27026561 27026592 -223661262 + (CGGGG)n Simple_repeat Simple_repeat 5 35 0 225 250 94 0 chr2 27027469 27027533 -223660321 - MIR SINE MIR -115 147 78 249 33 0 0 chr2 27027936 27027966 -223659888 + (T)n Simple_repeat Simple_repeat 1 30 0 348 24 0 0 chr2 27028764 27028805 -223659049 + (CA)n Simple_repeat Simple_repeat 1 41 0 2291 73 7 0 chr2 27029266 27029566 -223658288 + AluY SINE Alu 1 302 -9 367 246 82 18 chr2 27029601 27029711 -223658143 - MIR SINE MIR -44 218 102 180 111 0 0 chr2 27030685 27030712 -223657142 + (TG)n Simple_repeat Simple_repeat 2 28 0 2297 84 3 10 chr2 27031657 27031966 -223655888 + AluSp SINE Alu 1 307 -6 459 107 14 8 chr2 27032459 27032675 -223655179 + AluJo SINE Alu 1 298 -14 692 248 0 0 chr2 27032946 27033079 -223654775 - MER94 DNA DNA 0 134 2 2217 97 3 13 chr2 27033617 27033928 -223653926 - AluSg SINE Alu -2 308 1 1820 164 23 0 chr2 27034136 27034441 -223653413 - AluJb SINE Alu 0 312 1 2733 169 44 4 chr2 27034719 27035245 -223652609 - L1MC3 LINE L1 0 7785 7239 2071 131 0 7 chr2 27035430 27035736 -223652118 + AluSx SINE Alu 1 304 -8 234 156 0 0 chr2 27035869 27035914 -223651940 + (CA)n Simple_repeat Simple_repeat 2 46 0 351 217 0 33 chr2 27036052 27036144 -223651710 - AluY SINE Alu -212 89 1 675 260 58 42 chr2 27036263 27036678 -223651176 + MLT1F1 LTR MaLR 1 418 -172 707 196 8 15 chr2 27036751 27036884 -223650970 - FLAM_C SINE Alu -10 133 2 287 186 17 0 chr2 27036887 27036946 -223650908 + MLT1F1 LTR MaLR 534 593 -2 732 181 188 0 chr2 27036959 27037108 -223650746 + MER45A DNA AcHobo 2 178 0 495 301 47 10 chr2 27037178 27037371 -223650483 + MIR SINE MIR 2 201 -61 217 376 93 28 chr2 27037369 27037723 -223650131 + L2 LINE L2 2595 2971 -343 * 1510 172 20 50 chr2 27037782 27038079 -223649775 + AluJo SINE Alu 1 288 -14 2285 78 14 0 chr2 27039339 27039634 -223648220 + AluSp SINE Alu 1 299 -14 2243 96 0 3 chr2 27040098 27040400 -223647454 + AluSx SINE Alu 1 301 -11 611 269 71 55 chr2 27040442 27040680 -223647174 + MIR SINE MIR 11 252 -10 261 303 26 0 chr2 27040720 27040796 -223647058 + MIR SINE MIR 64 141 -121 2163 73 0 43 chr2 27041299 27041600 -223646254 + AluY SINE Alu 1 288 -23 243 0 0 0 chr2 27041716 27041743 -223646111 + (T)n Simple_repeat Simple_repeat 1 27 0 2351 45 10 0 chr2 27041754 27042044 -223645810 + AluY SINE Alu 2 294 -17 1660 59 5 0 chr2 27042149 27042353 -223645501 + AluSc SINE Alu 98 302 -7 523 286 146 21 chr2 27042563 27042755 -223645099 - MIR SINE MIR -25 237 22 195 283 0 0 chr2 27042898 27042951 -223644903 + L2 LINE L2 3257 3309 -4 279 317 106 15 chr2 27043583 27043848 -223644006 - L1ME LINE L1 -302 6213 5925 281 277 42 8 chr2 27043857 27043976 -223643878 - L1ME LINE L1 -2651 3889 3767 1662 153 3 24 chr2 27044039 27044326 -223643528 - AluJo SINE Alu -1 311 31 3070 112 130 131 chr2 27044326 27045650 -223642204 + pTR5 LTR ERV1 743 2438 0 465 279 109 59 chr2 27045688 27045932 -223641922 - L1MDa LINE L1 -2743 3797 3567 1386 164 15 134 chr2 27045932 27046261 -223641593 - AluJb SINE Alu -12 290 1 465 279 109 59 chr2 27046261 27046445 -223641409 - L1MDa LINE L1 -2973 3567 2345 474 262 95 8 chr2 27047183 27047309 -223640545 + MER5B DNA MER1_type 2 138 -40 638 294 233 9 chr2 27047404 27047931 -223639923 - L2 LINE L2 -343 2971 2327 328 151 0 0 chr2 27047949 27048002 -223639852 + MER74B LTR ERVL 1 53 -569 1113 243 111 19 chr2 27048035 27048405 -223639449 + MER74B LTR ERVL 209 612 -10 270 185 37 0 chr2 27048489 27048543 -223639311 - MLT1C LTR MaLR 0 467 412 1641 129 73 35 chr2 27048543 27048829 -223639025 + MER1B DNA MER1_type 1 297 -42 875 104 7 22 chr2 27048834 27048969 -223638885 + AluSq/x SINE Alu 1 133 -180 379 115 0 0 chr2 27048993 27049045 -223638809 + MER1B DNA MER1_type 275 326 -3 * 2338 183 5 20 chr2 27049045 27049251 -223638603 - MLT1C LTR MaLR -53 414 217 1650 161 45 87 chr2 27049251 27049555 -223638299 - MLT1A1 LTR MaLR -2 363 77 1798 147 13 20 chr2 27049555 27049855 -223637999 - AluJo SINE Alu -14 298 1 1650 161 45 87 chr2 27049855 27049929 -223637925 - MLT1A1 LTR MaLR -288 77 1 2338 183 5 20 chr2 27049929 27050143 -223637711 - MLT1C LTR MaLR -250 217 1 2118 73 0 24 chr2 27050508 27050826 -223637028 - AluY SINE Alu 0 311 1 282 337 0 0 chr2 27051066 27051161 -223636693 + (CA)n Simple_repeat Simple_repeat 2 96 0 210 271 0 0 chr2 27051176 27051272 -223636582 + (CACG)n Simple_repeat Simple_repeat 4 99 0 21 71 0 0 chr2 27051273 27051315 -223636539 + GC_rich Low_complexity Low_complexity 1 42 0 487 293 91 16 chr2 27052009 27052251 -223635603 + L3 LINE CR1 1312 1571 -6 445 246 109 62 chr2 27052259 27052364 -223635490 - MIR SINE MIR -21 241 142 2314 58 0 32 chr2 27052364 27052676 -223635178 + AluY SINE Alu 1 302 -9 445 246 109 62 chr2 27052676 27052781 -223635073 - MIR SINE MIR -120 142 21 1993 127 7 0 chr2 27053171 27053455 -223634399 + AluSx SINE Alu 1 286 -26 495 0 0 0 chr2 27053455 27053510 -223634344 + (GA)n Simple_repeat Simple_repeat 2 56 0 2143 115 0 0 chr2 27053513 27053817 -223634037 + AluSx SINE Alu 1 304 -8 796 310 85 53 chr2 27053826 27054150 -223633704 - L1MEd LINE L1 -5292 827 515 2001 120 0 19 chr2 27054150 27054459 -223633395 + AluSx SINE Alu 1 303 -9 796 310 85 53 chr2 27054459 27055126 -223632728 - L1MEd LINE L1 -5604 515 1 2295 98 0 0 chr2 27055221 27055527 -223632327 + AluSx SINE Alu 1 306 -6 181 265 82 0 chr2 27056926 27056975 -223630879 + L2 LINE L2 3211 3263 -9 2167 92 0 0 chr2 27057059 27057363 -223630491 - AluSg SINE Alu 0 304 1 207 100 0 0 chr2 27057601 27057631 -223630223 + (T)n Simple_repeat Simple_repeat 1 30 0 1715 172 10 3 chr2 27057965 27058262 -223629592 - AluJo SINE Alu -13 299 1 1853 140 3 35 chr2 27058264 27058578 -223629276 - AluSx SINE Alu -8 304 1 248 325 62 72 chr2 27058851 27059045 -223628809 - MIR SINE MIR -50 212 21 2259 88 3 0 chr2 27059708 27060005 -223627849 - AluSp SINE Alu -15 298 1 2334 97 0 0 chr2 27060296 27060606 -223627248 - AluSg SINE Alu 0 310 1 1746 172 7 7 chr2 27060625 27060922 -223626932 + AluJo SINE Alu 1 297 -15 1537 170 21 28 chr2 27060954 27061242 -223626612 - AluJb SINE Alu -26 286 1 187 326 76 11 chr2 27062754 27062846 -223625008 - MIR SINE MIR -83 125 28 245 224 0 0 chr2 27063307 27063356 -223624498 - L2 LINE L2 -3 3269 3221 363 168 7 168 chr2 27066740 27066877 -223620977 - MIR3 SINE MIR -32 176 62 259 319 76 60 chr2 27067045 27067230 -223620624 + MIR3 SINE MIR 19 206 -2 249 231 51 39 chr2 27067801 27067879 -223619975 + MIR3 SINE MIR 106 184 -24 190 111 0 0 chr2 27068052 27068079 -223619775 + MER5B DNA MER1_type 6 32 -146 983 219 27 9 chr2 27068091 27068310 -223619544 + AluJo SINE Alu 1 223 -89 484 144 18 90 chr2 27068311 27068422 -223619432 + AluJo SINE Alu 105 207 -105 635 191 76 8 chr2 27068769 27068900 -223618954 + FLAM_C SINE Alu 2 141 -2 519 299 86 23 chr2 27070422 27070643 -223617211 + MIR SINE MIR 28 262 0 1224 92 6 0 chr2 27073229 27073392 -223614462 - AluSg/x SINE Alu -17 295 132 1712 100 0 0 chr2 27073505 27073736 -223614118 - AluSc SINE Alu -78 231 1 945 127 14 0 chr2 27073847 27073989 -223613865 - FRAM SINE Alu -32 144 1 264 184 58 68 chr2 27079728 27079831 -223608023 - MIR SINE MIR -70 192 91 22 0 0 0 chr2 27080672 27080694 -223607160 + GC_rich Low_complexity Low_complexity 1 22 0 1860 61 65 47 chr2 27080747 27081025 -223606829 + AluSp SINE Alu 14 296 -17 1225 161 27 65 chr2 27081031 27081323 -223606531 + AluJb SINE Alu 2 282 -30 191 118 59 0 chr2 27081410 27081444 -223606410 - MIR SINE MIR -90 118 83 2094 113 0 3 chr2 27082036 27082329 -223605525 - AluSx SINE Alu -15 297 6 1781 145 17 24 chr2 27082335 27082631 -223605223 - AluJo SINE Alu -8 304 11 244 261 0 78 chr2 27083756 27083898 -223603956 + G-rich Low_complexity Low_complexity 5 135 0 210 261 14 29 chr2 27084710 27084779 -223603075 + GA-rich Low_complexity Low_complexity 4 71 0 4363 166 27 1 chr2 27085637 27086053 -223601801 - L1MB7 LINE L1 -9 6175 5771 2346 119 0 0 chr2 27086053 27086363 -223601491 - AluSx SINE Alu -1 311 2 4363 166 27 1 chr2 27086363 27086785 -223601069 - L1MB7 LINE L1 -413 5771 5315 340 83 0 0 chr2 27086785 27086833 -223601021 - HY4 scRNA scRNA 0 93 46 2428 64 0 27 chr2 27086834 27087131 -223600723 - AluSg SINE Alu -21 289 1 2094 156 0 6 chr2 27087147 27087461 -223600393 - AluJb SINE Alu 0 312 1 1071 94 0 0 chr2 27087479 27087617 -223600237 - AluSg/x SINE Alu -11 299 162 3385 75 30 136 chr2 27087617 27087685 -223600169 + MER4A LTR ERV1 65 139 -525 2195 107 0 23 chr2 27087685 27087985 -223599869 + AluSx SINE Alu 1 293 -19 3385 75 30 136 chr2 27087985 27088307 -223599547 + MER4A LTR ERV1 139 357 -307 1723 158 54 0 chr2 27088307 27088585 -223599269 + AluJb SINE Alu 1 293 -19 3385 75 30 136 chr2 27088585 27088863 -223598991 + MER4A LTR ERV1 357 663 -1 4749 210 36 41 chr2 27088869 27089216 -223598638 - L1M4 LINE L1 -2154 3992 3645 1745 215 31 49 chr2 27089216 27089667 -223598187 + LTR47B LTR ERVL 1 443 0 4749 210 36 41 chr2 27089667 27090111 -223597743 - L1M4 LINE L1 -2501 3645 3200 2376 98 0 0 chr2 27090111 27090443 -223597411 - AluSq SINE Alu 0 313 1 4749 210 36 41 chr2 27090443 27090588 -223597266 - L1M4 LINE L1 -2946 3200 3056 2404 92 0 16 chr2 27090588 27090905 -223596949 - AluSq SINE Alu -1 312 1 4749 210 36 41 chr2 27090905 27091200 -223596654 - L1M4 LINE L1 -3090 3056 2764 2379 89 3 0 chr2 27091200 27091502 -223596352 - AluSp SINE Alu -4 309 7 4749 210 36 41 chr2 27091502 27091693 -223596161 - L1M4 LINE L1 -3382 2764 2574 914 157 0 44 chr2 27091718 27091877 -223595977 - FRAM SINE Alu -28 148 1 1901 177 29 26 chr2 27091947 27092331 -223595523 - MLT1F LTR MaLR -3 539 155 748 198 108 0 chr2 27092332 27092489 -223595365 - FAM SINE Alu 0 175 2 2348 95 7 0 chr2 27092502 27092808 -223595046 - AluSq SINE Alu -5 308 1 452 285 47 24 chr2 27092863 27093090 -223594764 - L1ME4a LINE L1 -187 5934 5729 314 89 0 36 chr2 27093106 27093146 -223594708 + (TTCC)n Simple_repeat Simple_repeat 3 42 -14 2232 99 0 7 chr2 27093146 27093439 -223594415 - AluY SINE Alu -20 291 1 314 89 0 36 chr2 27093439 27093454 -223594400 + (TTCC)n Simple_repeat Simple_repeat 42 56 0 2418 69 13 7 chr2 27093462 27093768 -223594086 - AluSc SINE Alu -1 308 1 201 291 139 12 chr2 27094012 27094079 -223593775 - L2 LINE L2 -89 3183 3106 537 291 128 18 chr2 27094079 27094306 -223593548 + MIR SINE MIR 2 253 -9 369 286 16 32 chr2 27095455 27095581 -223592273 - MIR3 SINE MIR -76 132 9 261 244 215 30 chr2 27095723 27095858 -223591996 + MIR3 SINE MIR 3 162 -46 439 249 259 10 chr2 27096874 27097075 -223590779 - MIR SINE MIR 0 262 12 28 0 0 0 chr2 27097181 27097209 -223590645 + AT_rich Low_complexity Low_complexity 1 28 0 2212 113 3 0 chr2 27097215 27097506 -223590348 - AluSx SINE Alu -20 292 1 1307 165 24 20 chr2 27097507 27097761 -223590093 - AluJo SINE Alu -9 303 49 341 21 0 21 chr2 27099377 27099424 -223588430 + (TTTTC)n Simple_repeat Simple_repeat 2 47 0 867 124 0 8 chr2 27099426 27099547 -223588307 - FLAM_C SINE Alu -23 120 1 2340 112 0 6 chr2 27101331 27101643 -223586211 + AluSg SINE Alu 1 310 0 1145 112 28 17 chr2 27101915 27102093 -223585761 + AluSx SINE Alu 1 180 -132 2507 55 0 29 chr2 27102264 27102574 -223585280 - AluY SINE Alu -10 301 1 1057 207 58 0 chr2 27102782 27102990 -223584864 + MER58A DNA MER1_type 5 224 0 351 233 23 0 chr2 27102998 27103084 -223584770 + Charlie1b DNA MER1_type 1 88 -435 1856 161 17 0 chr2 27103096 27103388 -223584466 + AluSx SINE Alu 1 297 -15 2198 126 3 7 chr2 27103391 27103700 -223584154 + AluSx SINE Alu 5 312 0 762 183 12 67 chr2 27103700 27103887 -223583967 + AluJb SINE Alu 134 312 0 1574 160 52 30 chr2 27103897 27104297 -223583557 + Charlie1b DNA MER1_type 110 518 -5 2695 115 0 0 chr2 27106043 27106418 -223581436 - THE1C LTR MaLR 0 375 1 2233 99 10 13 chr2 27106502 27106672 -223581182 - AluSq SINE Alu -10 303 133 1882 123 51 27 chr2 27106672 27106965 -223580889 - AluSq SINE Alu -13 300 1 2233 99 10 13 chr2 27106965 27107098 -223580756 - AluSq SINE Alu -180 133 1 693 163 37 52 chr2 27107111 27107246 -223580608 - FLAM_A SINE Alu 0 133 1 1917 146 3 22 chr2 27107687 27108003 -223579851 - AluJb SINE Alu -2 310 1 778 57 9 9 chr2 27108033 27108139 -223579715 - LTR23 LTR ERV1 -12 425 320 392 206 21 10 chr2 27108123 27108220 -223579634 + LTR23 LTR ERV1 340 437 0 * 492 306 70 55 chr2 27108605 27108948 -223578906 + MER4B-int LTR ERV1 346 693 -6065 3233 76 9 38 chr2 27108995 27109094 -223578760 + MER57B LTR ERV1 2 102 -332 2247 124 0 0 chr2 27109094 27109385 -223578469 + AluSx SINE Alu 8 298 -14 3233 76 9 38 chr2 27109385 27109731 -223578123 + MER57B LTR ERV1 102 434 0 398 209 0 12 chr2 27109989 27110075 -223577779 + MER4B-int LTR ERV1 1557 1641 -4690 642 140 0 0 chr2 27110078 27110185 -223577669 + MER72 LTR ERV1 1 107 -615 2876 99 59 60 chr2 27110185 27110350 -223577504 - MER4B LTR ERV1 0 779 615 2480 69 3 3 chr2 27110350 27110653 -223577201 + AluY SINE Alu 1 303 -8 2876 99 59 60 chr2 27110653 27111093 -223576761 - MER4B LTR ERV1 -164 615 1 755 153 0 15 chr2 27111094 27111231 -223576623 + MER4D LTR ERV1 105 239 -664 982 234 43 67 chr2 27111333 27111679 -223576175 + LTR10B LTR ERV1 210 547 0 21 36 0 0 chr2 27111723 27111751 -223576103 + AT_rich Low_complexity Low_complexity 1 28 0 3374 165 12 48 chr2 27111873 27112200 -223575654 + MER4D LTR ERV1 238 529 -374 2037 149 0 13 chr2 27112200 27112509 -223575345 - AluSx SINE Alu -1 311 7 3374 165 12 48 chr2 27112509 27112864 -223574990 + MER4D LTR ERV1 529 895 -8 913 158 45 25 chr2 27112910 27113112 -223574742 + LTR49-int LTR ERV1 1670 1875 -4456 1010 69 35 0 chr2 27113118 27113263 -223574591 + LTR56 LTR ERV1 188 337 -108 707 286 48 22 chr2 27113281 27113637 -223574217 + L1ME LINE L1 8 372 -5747 630 292 43 78 chr2 27113664 27113748 -223574106 + L1ME LINE L1 561 646 -5473 1925 177 0 0 chr2 27113748 27114053 -223573801 + AluJb SINE Alu 1 305 -7 630 292 43 78 chr2 27114053 27114414 -223573440 + L1ME LINE L1 646 986 -5133 2192 132 0 6 chr2 27114414 27114725 -223573129 + AluSx SINE Alu 3 311 -1 630 292 43 78 chr2 27114725 27114816 -223573038 + L1ME LINE L1 986 1079 -5040 * 696 255 28 47 chr2 27114800 27115122 -223572732 + L1ME LINE L1 5007 5322 -807 1003 165 0 17 chr2 27115128 27115304 -223572550 - FRAM SINE Alu -3 173 1 479 186 137 0 chr2 27115304 27115428 -223572426 + L1ME LINE L1 5317 5457 -690 2537 65 0 7 chr2 27115464 27115770 -223572084 + AluSx SINE Alu 1 304 -8 289 258 0 0 chr2 27115770 27115824 -223572030 + L1ME LINE L1 5662 5718 -435 587 203 84 0 chr2 27115839 27115982 -223571872 + LTR50 LTR ERVL 59 213 -582 376 254 42 34 chr2 27116034 27116076 -223571778 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27116076 27116377 -223571477 + AluSx SINE Alu 1 301 -11 376 254 42 34 chr2 27116377 27116510 -223571344 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27116592 27116658 -223571196 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27116727 27116890 -223570964 - FRAM SINE Alu -1 165 2 1792 143 43 7 chr2 27117204 27117483 -223570371 - AluJo SINE Alu -9 303 15 838 164 217 5 chr2 27117561 27117768 -223570086 + AluJo SINE Alu 48 298 -14 418 307 53 22 chr2 27117768 27118126 -223569728 - L1MEc LINE L1 -4746 1650 1282 776 157 31 13 chr2 27118589 27118748 -223569106 + AluSc SINE Alu 140 301 -8 247 274 0 0 chr2 27118749 27118800 -223569054 + L1ME LINE L1 5685 5735 -435 587 203 84 0 chr2 27118815 27118958 -223568896 + LTR50 LTR ERVL 59 213 -582 376 260 42 34 chr2 27119010 27119052 -223568802 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27119052 27119353 -223568501 + AluSx SINE Alu 1 301 -11 376 260 42 34 chr2 27119353 27119486 -223568368 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27119568 27119634 -223568220 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27119703 27119866 -223567988 - FRAM SINE Alu -1 165 2 1710 158 47 30 chr2 27120183 27120481 -223567373 - AluJb SINE Alu -9 303 1 2141 117 0 39 chr2 27121528 27121837 -223566017 + AluSg SINE Alu 1 297 -13 2417 298 67 62 chr2 27122717 27124260 -223563594 + L2 LINE L2 443 1994 -1320 741 179 0 36 chr2 27124262 27124402 -223563452 - FRAM SINE Alu 0 40 1 2366 97 3 0 chr2 27124494 27124802 -223563052 - AluSp SINE Alu -4 309 1 771 222 54 52 chr2 27124853 27125132 -223562722 + L1MC/D LINE L1 5174 5458 -834 1945 149 0 3 chr2 27125132 27125449 -223562405 + AluSx SINE Alu 1 316 0 771 222 54 52 chr2 27125449 27125530 -223562324 + L1MC/D LINE L1 5458 5537 -755 351 0 0 0 chr2 27125638 27125677 -223562177 + (CA)n Simple_repeat Simple_repeat 2 40 0 1116 135 0 18 chr2 27125746 27125909 -223561945 - FRAM SINE Alu -8 168 9 2319 122 0 3 chr2 27125987 27126298 -223561556 - AluSx SINE Alu -2 310 1 1798 143 10 51 chr2 27126300 27126614 -223561240 - AluJb SINE Alu -11 301 1 524 264 83 61 chr2 27126987 27127294 -223560560 - MLT1L LTR MaLR -4 611 213 1882 166 7 10 chr2 27127387 27127695 -223560159 - AluJo SINE Alu -5 307 1 2466 206 6 61 chr2 27127695 27128223 -223559631 - L1M4 LINE L1 -1867 4279 3792 191 61 30 0 chr2 27128223 27128256 -223559598 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2466 206 6 61 chr2 27128256 27128382 -223559472 - L1M4 LINE L1 -2354 3792 3661 975 169 226 24 chr2 27128526 27128774 -223559080 - AluY SINE Alu 0 311 14 2241 113 10 0 chr2 27129140 27129441 -223558413 + AluSq SINE Alu 1 304 -9 2239 125 0 0 chr2 27130013 27130316 -223557538 - AluSx SINE Alu -9 303 1 1885 156 18 0 chr2 27130543 27130825 -223557029 + AluSx SINE Alu 3 289 -23 344 276 62 21 chr2 27131160 27131305 -223556549 + L1ME LINE L1 334 484 -5586 370 286 45 62 chr2 27131312 27131490 -223556364 + L1ME LINE L1 383 557 -5513 1576 170 3 35 chr2 27131520 27131831 -223556023 + AluJo SINE Alu 12 312 0 269 202 117 91 chr2 27131905 27132067 -223555787 + L1ME LINE L1 606 772 -5308 617 161 21 0 chr2 27132067 27132190 -223555664 + MSTD LTR MaLR 69 193 -203 2190 116 7 7 chr2 27132190 27132492 -223555362 + AluSx SINE Alu 1 302 -10 949 165 5 48 chr2 27132565 27132753 -223555101 + MSTD LTR MaLR 217 396 0 387 192 77 90 chr2 27132753 27132909 -223554945 - HAL1 LINE L1 -2332 175 22 198 0 0 0 chr2 27133824 27133846 -223554008 + (CA)n Simple_repeat Simple_repeat 2 23 0 447 70 14 14 chr2 27133933 27134004 -223553850 + MER53 DNA DNA 1 71 -118 835 256 68 30 chr2 27134009 27134275 -223553579 + MLT1L LTR MaLR 119 394 -221 452 259 50 0 chr2 27134312 27134451 -223553403 + MLT1L LTR MaLR 466 611 -4 2201 112 3 13 chr2 27135008 27135313 -223552541 - AluSq SINE Alu -11 302 1 317 269 34 25 chr2 27135547 27135666 -223552188 - L1MC4a LINE L1 -1945 5863 5744 614 293 76 50 chr2 27136197 27136361 -223551493 - L1MC4a LINE L1 -2057 5751 5593 2321 121 0 0 chr2 27136361 27136666 -223551188 + AluSx SINE Alu 1 305 -7 614 293 76 50 chr2 27136666 27136986 -223550868 - L1MC4a LINE L1 -2215 5593 5254 863 162 0 108 chr2 27137070 27137255 -223550599 + AluSg/x SINE Alu 135 299 -11 2255 95 10 13 chr2 27137296 27137600 -223550254 + AluSp SINE Alu 1 303 -10 781 251 15 10 chr2 27137685 27137884 -223549970 + L1MB8 LINE L1 4803 5002 -1144 1621 175 8 0 chr2 27137885 27138131 -223549723 + AluJb SINE Alu 50 297 -15 2475 86 0 0 chr2 27138132 27138433 -223549421 + AluSg SINE Alu 1 301 -9 294 242 30 0 chr2 27138434 27138500 -223549354 + L1MC2 LINE L1 6223 6290 -54 207 0 0 0 chr2 27138502 27138525 -223549329 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 888 144 95 10 chr2 27138554 27138662 -223549192 + L1MB8 LINE L1 5417 5514 -664 2221 75 14 3 chr2 27138662 27138971 -223548883 - AluSx SINE Alu 0 312 1 888 144 95 10 chr2 27138971 27139142 -223548712 + L1MB8 LINE L1 5514 5965 -213 671 204 133 11 chr2 27139149 27139330 -223548524 + L1MC/D LINE L1 746 948 -5592 367 224 60 60 chr2 27139854 27139988 -223547866 + L1MC/D LINE L1 4960 5093 -1447 335 300 60 69 chr2 27140038 27140271 -223547583 + L1MC/D LINE L1 5207 5437 -1103 2572 59 3 7 chr2 27140353 27140660 -223547194 + AluY SINE Alu 1 306 -5 1271 109 0 0 chr2 27140660 27140825 -223547029 + AluSg/x SINE Alu 132 296 -14 378 309 88 60 chr2 27140946 27141163 -223546691 + L1MC/D LINE L1 5649 5871 -2331 248 323 15 0 chr2 27141177 27141307 -223546547 - L1M4 LINE L1 -3173 2973 2842 1762 167 0 37 chr2 27141319 27141618 -223546236 + AluJb SINE Alu 1 288 -24 549 44 0 0 chr2 27141618 27141686 -223546168 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2385 94 0 0 chr2 27141963 27142260 -223545594 - AluY SINE Alu -14 297 1 262 213 64 11 chr2 27142268 27142362 -223545492 - L1MC4a LINE L1 -1857 5951 5853 1767 91 0 0 chr2 27142471 27142690 -223545164 + AluSq SINE Alu 1 219 -94 580 165 8 33 chr2 27142690 27142811 -223545043 + AluSp/q SINE Alu 188 305 -8 287 296 148 6 chr2 27142976 27143138 -223544716 - L1ME3A LINE L1 -208 5962 5778 207 88 0 0 chr2 27143175 27143209 -223544645 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 1049 158 224 70 chr2 27143211 27143452 -223544402 - AluJb SINE Alu -34 278 1 401 265 0 0 chr2 27143502 27143585 -223544269 + Charlie1a DNA MER1_type 1 83 -1372 1405 44 0 11 chr2 27143589 27143770 -223544084 - L1PA3 LINE L1 0 6155 5977 1772 5 0 0 chr2 27143770 27143975 -223543879 + L1PA3 LINE L1 5656 5860 -295 650 184 6 54 chr2 27143975 27144143 -223543711 + Charlie1a DNA MER1_type 72 231 -1224 626 184 0 40 chr2 27144191 27144316 -223543538 + AluSg/x SINE Alu 178 297 -13 455 161 0 35 chr2 27144317 27144404 -223543450 - MER112 DNA MER1_type -176 84 1 2342 75 48 3 chr2 27145191 27145484 -223542370 + AluSg1 SINE Alu 1 306 -3 1609 170 23 0 chr2 27146153 27146418 -223541436 - AluJo SINE Alu -5 307 37 2265 114 7 7 chr2 27150196 27150503 -223537351 + AluSx SINE Alu 1 307 -5 217 314 46 26 chr2 27152019 27152158 -223535696 + MIR3 SINE MIR 21 162 -46 235 288 151 0 chr2 27152285 27152358 -223535496 - L3 LINE CR1 -2 1575 1492 1369 59 10 49 chr2 27153525 27153728 -223534126 - MER107 DNA MER1_type -2 195 1 200 305 12 12 chr2 27153895 27153977 -223533877 + CT-rich Low_complexity Low_complexity 4 85 0 384 325 16 0 chr2 27157074 27157200 -223530654 - MIR3 SINE MIR -66 142 15 308 258 65 102 chr2 27157304 27157490 -223530364 - MIR SINE MIR -4 258 80 1817 100 0 54 chr2 27158413 27158672 -223529182 - AluSg SINE Alu -20 290 46 2582 30 0 7 chr2 27158726 27159021 -223528833 + AluY SINE Alu 17 309 -2 27 62 0 0 chr2 27159916 27159964 -223527890 + GC_rich Low_complexity Low_complexity 1 48 0 830 99 0 25 chr2 27161892 27162013 -223525841 - AluSp/q SINE Alu -3 310 193 202 308 142 25 chr2 27162141 27162261 -223525593 + L2 LINE L2 3139 3272 0 545 200 35 83 chr2 27162490 27162534 -223525320 + MER3 DNA MER1_type 1 46 -116 2395 86 7 0 chr2 27162534 27162824 -223525030 + AluSg SINE Alu 1 292 -18 545 200 35 83 chr2 27162824 27162924 -223524930 + MER3 DNA MER1_type 46 138 -71 731 159 38 15 chr2 27162928 27163060 -223524794 - AluJb SINE Alu -176 136 2 307 190 0 0 chr2 27163069 27163127 -223524727 + MER3 DNA MER1_type 152 209 0 1301 164 78 108 chr2 27163876 27164338 -223523516 - LTR7 LTR ERV1 -2 448 1 1289 178 0 14 chr2 27167298 27167517 -223520337 - AluJb SINE Alu -13 299 84 2204 115 10 0 chr2 27167538 27167843 -223520011 - AluSp SINE Alu -5 308 1 237 285 113 38 chr2 27167933 27168119 -223519735 + L2 LINE L2 3100 3299 -14 1788 144 10 39 chr2 27168320 27168625 -223519229 + AluJb SINE Alu 1 296 -16 2340 106 0 3 chr2 27168630 27168941 -223518913 + AluY SINE Alu 1 310 -1 844 237 147 21 chr2 27169541 27170010 -223517844 - L1MC5 LINE L1 -178 7783 7256 2355 105 0 0 chr2 27171104 27171410 -223516444 + AluSx SINE Alu 4 309 -3 259 293 197 14 chr2 27172145 27172292 -223515562 + MIR3 SINE MIR 35 208 0 2376 95 3 19 chr2 27173248 27173564 -223514290 - AluSp SINE Alu -2 311 1 681 234 21 0 chr2 27176399 27176540 -223511314 + FRAM SINE Alu 2 145 -31 1976 113 29 4 chr2 27176542 27176837 -223511017 - AluSp SINE Alu 0 302 1 2480 84 0 3 chr2 27176862 27177170 -223510684 - AluSc SINE Alu -2 307 1 1280 201 28 32 chr2 27177229 27177512 -223510342 - AluJo SINE Alu -20 292 11 2238 117 3 0 chr2 27177548 27177848 -223510006 + AluSg SINE Alu 1 301 -9 2215 110 7 0 chr2 27177908 27178198 -223509656 + AluSq SINE Alu 1 292 -21 2045 104 58 0 chr2 27178312 27178590 -223509264 + AluSq SINE Alu 1 294 -19 2421 83 0 3 chr2 27178946 27179258 -223508596 - AluY SINE Alu 0 311 1 444 265 38 23 chr2 27179700 27179832 -223508022 - MIR SINE MIR -108 154 21 953 148 11 85 chr2 27183655 27183844 -223504010 + AluJb SINE Alu 129 303 -9 234 259 84 21 chr2 27185092 27185235 -223502619 - L1ME LINE L1 -369 5752 5601 2254 105 3 10 chr2 27185579 27185885 -223501969 - AluSx SINE Alu -3 309 6 329 265 138 50 chr2 27186512 27186759 -223501095 + L2 LINE L2 2777 3049 -264 270 0 0 0 chr2 27186807 27186837 -223501017 + (CA)n Simple_repeat Simple_repeat 2 31 0 205 200 0 0 chr2 27186837 27186877 -223500977 + (TA)n Simple_repeat Simple_repeat 1 40 0 1913 138 50 0 chr2 27186877 27187160 -223500694 - AluJb SINE Alu -15 297 1 622 96 4 3 chr2 27187323 27187553 -223500301 + AluSg SINE Alu 1 297 -13 465 204 48 10 chr2 27187574 27187677 -223500177 + L2 LINE L2 3201 3307 -6 207 227 160 40 chr2 27187872 27187947 -223499907 + L2 LINE L2 3188 3271 -1 181 286 143 0 chr2 27187987 27188071 -223499783 - MIR SINE MIR -65 197 102 463 307 34 3 chr2 27188395 27188559 -223499295 + MIR SINE MIR 20 141 -67 528 245 116 19 chr2 27188896 27189051 -223498803 - MIR3 SINE MIR -9 199 30 292 186 51 0 chr2 27189374 27189433 -223498421 + MIR SINE MIR 128 189 -73 1293 119 11 0 chr2 27190164 27190341 -223497513 - AluSg/x SINE Alu -2 310 132 2380 103 0 10 chr2 27190541 27190853 -223497001 + AluSc SINE Alu 1 309 0 1954 78 112 4 chr2 27191307 27191576 -223496278 - AluYa8 SINE Alu -12 298 1 260 333 133 0 chr2 27191696 27191816 -223496038 - L2 LINE L2 0 3272 3137 1926 218 120 107 chr2 27191817 27191858 -223495996 - L2 LINE L2 -1 3312 3273 231 61 0 0 chr2 27191858 27191891 -223495963 + (CAGTA)n Simple_repeat Simple_repeat 3 35 0 1926 218 120 107 chr2 27191891 27192083 -223495771 - L2 LINE L2 -40 3273 3085 2449 87 3 10 chr2 27192083 27192395 -223495459 - AluSx SINE Alu -2 310 1 1926 218 120 107 chr2 27192395 27193132 -223494722 - L2 LINE L2 -228 3085 2358 2118 133 7 3 chr2 27193132 27193433 -223494421 - AluSx SINE Alu -10 302 1 1926 218 120 107 chr2 27193433 27193444 -223494410 - L2 LINE L2 -955 2358 2349 376 204 41 20 chr2 27193444 27193542 -223494312 - L1MC5 LINE L1 -36 7925 7826 1926 218 120 107 chr2 27193542 27193757 -223494097 - L2 LINE L2 -964 2349 2005 1159 158 0 0 chr2 27193829 27194000 -223493854 + AluJb SINE Alu 142 312 0 234 241 19 0 chr2 27194036 27194090 -223493764 - L2 LINE L2 -202 3070 3016 395 202 97 116 chr2 27194193 27194451 -223493403 - L2 LINE L2 -38 3234 2982 216 0 0 0 chr2 27195681 27195705 -223492149 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 255 277 103 0 chr2 27196271 27196394 -223491460 + MIR SINE MIR 23 155 -61 291 54 0 0 chr2 27197539 27197576 -223490278 + (CCCCCG)n Simple_repeat Simple_repeat 5 41 0 2316 94 7 10 chr2 27197653 27197960 -223489894 + AluSq SINE Alu 1 306 -7 201 133 0 0 chr2 27198312 27198342 -223489512 + L3 LINE CR1 1424 1453 -124 2221 104 0 47 chr2 27198601 27198919 -223488935 - AluSx SINE Alu -9 303 1 2138 104 7 4 chr2 27198927 27199239 -223488615 - AluSg SINE Alu 0 313 1 203 189 0 0 chr2 27199894 27199931 -223487923 + (TTG)n Simple_repeat Simple_repeat 3 39 0 2471 92 0 9 chr2 27200076 27200391 -223487463 + AluSx SINE Alu 1 312 0 2508 93 0 0 chr2 27200402 27200712 -223487142 + AluSg SINE Alu 1 310 0 194 0 39 0 chr2 27200956 27200982 -223486872 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1742 129 39 25 chr2 27200995 27201274 -223486580 - AluSx SINE Alu -28 284 2 1854 179 0 35 chr2 27201308 27201627 -223486227 + AluJb SINE Alu 1 308 -4 191 114 29 0 chr2 27201627 27201662 -223486192 + GA-rich Low_complexity Low_complexity 1 36 0 245 111 0 0 chr2 27203177 27203213 -223484641 + U2 snRNA snRNA 1 36 -152 450 53 0 0 chr2 27205443 27205500 -223482354 + (CA)n Simple_repeat Simple_repeat 1 57 0 2312 116 0 0 chr2 27205531 27205834 -223482020 + AluSg SINE Alu 1 303 -7 507 161 0 45 chr2 27207289 27207401 -223480453 - FLAM_A SINE Alu 0 142 36 1847 166 3 16 chr2 27208341 27208649 -223479205 - AluJb SINE Alu -8 304 1 1706 181 17 27 chr2 27208670 27208969 -223478885 - AluJo SINE Alu -16 296 1 474 237 23 15 chr2 27210295 27210426 -223477428 - Charlie4a DNA MER1_type -10 498 367 457 206 95 32 chr2 27210426 27210487 -223477367 + MER106B DNA MER1_type 1 57 -1002 2133 93 4 4 chr2 27210487 27210757 -223477097 - AluSp SINE Alu -43 270 1 457 206 95 32 chr2 27210757 27210881 -223476973 + MER106B DNA MER1_type 57 1022 -37 704 165 0 0 chr2 27210883 27210992 -223476862 + FLAM_A SINE Alu 8 116 -26 2422 102 0 0 chr2 27211001 27211306 -223476548 - AluSx SINE Alu -1 311 7 26 0 0 0 chr2 27211330 27211356 -223476498 + AT_rich Low_complexity Low_complexity 1 26 0 1021 181 32 48 chr2 27211395 27211527 -223476327 - Charlie4a DNA MER1_type -1581 380 249 1820 97 85 0 chr2 27211527 27211813 -223476041 + AluY SINE Alu 1 308 0 1021 181 32 48 chr2 27211813 27211925 -223475929 - Charlie4a DNA MER1_type -1712 249 137 275 143 71 79 chr2 27212116 27212212 -223475642 + MER113 DNA MER1_type? 11 107 -414 2127 146 0 3 chr2 27212212 27212521 -223475333 + AluSq SINE Alu 1 308 -5 275 143 71 79 chr2 27212521 27212550 -223475304 + MER113 DNA MER1_type? 107 135 -386 1206 187 13 18 chr2 27213433 27213658 -223474196 + AluJo SINE Alu 6 229 -83 1694 172 87 12 chr2 27213679 27214081 -223473773 - L1MB3 LINE L1 0 6183 5752 2244 89 3 10 chr2 27214879 27215208 -223472646 + AluSx SINE Alu 1 312 0 1657 168 33 0 chr2 27215256 27215560 -223472294 - AluJb SINE Alu 0 313 1 838 248 4 69 chr2 27215583 27215749 -223472105 + MIR SINE MIR 1 147 -115 2264 97 7 7 chr2 27215749 27216049 -223471805 + AluSc SINE Alu 1 300 -9 838 248 4 69 chr2 27216049 27216128 -223471726 + MIR SINE MIR 147 230 -32 2447 95 0 7 chr2 27216512 27216818 -223471036 - AluSx SINE Alu -8 304 1 281 299 144 0 chr2 27218215 27218312 -223469542 + L2 LINE L2 3203 3313 0 2146 100 78 0 chr2 27219447 27219728 -223468126 + AluSx SINE Alu 1 303 -9 189 0 0 0 chr2 27222877 27222898 -223464956 + (T)n Simple_repeat Simple_repeat 1 21 0 194 175 50 0 chr2 27224242 27224282 -223463572 - MIR SINE MIR -60 148 107 2121 103 21 3 chr2 27224286 27224576 -223463278 + AluSq SINE Alu 5 299 -14 2262 119 0 16 chr2 27225521 27225831 -223462023 - AluSx SINE Alu -7 305 1 253 269 30 0 chr2 27225985 27226052 -223461802 - MIR SINE MIR -30 232 164 1726 165 3 38 chr2 27226253 27226569 -223461285 - AluJb SINE Alu -7 305 1 700 158 0 86 chr2 27226571 27226635 -223461219 - FLAM_C SINE Alu -172 140 72 2557 34 41 3 chr2 27226635 27226930 -223460924 - AluY SINE Alu -5 306 1 700 158 0 86 chr2 27226930 27227017 -223460837 - FLAM_C SINE Alu -240 72 2 200 316 132 11 chr2 27227316 27227490 -223460364 - L2 LINE L2 -830 2484 2290 411 226 118 0 chr2 27227544 27227646 -223460208 + L2 LINE L2 3195 3308 -5 2658 54 0 6 chr2 27228172 27228485 -223459369 + AluY SINE Alu 1 311 0 722 192 0 0 chr2 27229347 27229472 -223458382 + FLAM_A SINE Alu 4 128 -5 217 193 24 48 chr2 27230331 27230414 -223457440 + C-rich Low_complexity Low_complexity 3 83 0 286 255 176 0 chr2 27230928 27231030 -223456824 - MIR SINE MIR -115 147 28 185 311 75 19 chr2 27231149 27231255 -223456599 + MIR3 SINE MIR 81 192 -16 1554 82 0 29 chr2 27232036 27232203 -223455651 - AluSg/x SINE Alu -13 299 138 2432 88 3 0 chr2 27232203 27232498 -223455356 - AluSp SINE Alu -17 296 1 1554 82 0 29 chr2 27232498 27232538 -223455316 - AluSg/x SINE Alu -174 138 98 1976 158 0 0 chr2 27232538 27232823 -223455031 - AluJb SINE Alu -27 285 1 1939 144 6 44 chr2 27232825 27233144 -223454710 - AluJo SINE Alu -3 309 3 2062 145 3 3 chr2 27233153 27233450 -223454404 - AluJo SINE Alu -15 297 1 372 22 0 0 chr2 27234244 27234289 -223453565 + (CA)n Simple_repeat Simple_repeat 2 46 0 249 33 0 0 chr2 27234630 27234660 -223453194 + (CTGGGG)n Simple_repeat Simple_repeat 1 30 0 180 152 0 0 chr2 27235706 27235739 -223452115 + (TG)n Simple_repeat Simple_repeat 1 33 0 531 266 80 34 chr2 27236969 27237206 -223450648 + MIR SINE MIR 1 248 -14 292 226 77 54 chr2 27237838 27238006 -223449848 + L1ME4a LINE L1 5946 6117 -4 301 233 55 0 chr2 27238623 27238696 -223449158 - MIR3 SINE MIR -4 204 128 2233 98 0 0 chr2 27238698 27238995 -223448859 + AluSc SINE Alu 1 297 -12 876 156 0 0 chr2 27238996 27239137 -223448717 - FRAM SINE Alu -35 141 1 230 308 67 10 chr2 27239137 27239241 -223448613 - MIR3 SINE MIR -49 159 50 23 0 0 0 chr2 27241585 27241608 -223446246 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 27242191 27242216 -223445638 + GC_rich Low_complexity Low_complexity 1 25 0 1982 66 81 11 chr2 27242484 27242755 -223445099 + AluY SINE Alu 9 298 -13 264 249 49 100 chr2 27242761 27243025 -223444829 + L1MEd LINE L1 1001 1344 -1146 474 271 94 54 chr2 27243513 27243716 -223444138 + MIR SINE MIR 38 248 -14 228 328 16 0 chr2 27243747 27243811 -223444043 + MIR SINE MIR 42 106 -102 287 350 44 22 chr2 27244162 27244342 -223443512 + MIR SINE MIR 9 192 -70 21 0 0 0 chr2 27245999 27246020 -223441834 + GC_rich Low_complexity Low_complexity 1 21 0 312 282 107 8 chr2 27247302 27247396 -223440458 + MIR3 SINE MIR 42 154 -54 2362 87 0 0 chr2 27247396 27247705 -223440149 + AluSg SINE Alu 1 309 -1 312 282 107 8 chr2 27247705 27247741 -223440113 + MIR3 SINE MIR 154 185 -23 204 121 0 0 chr2 27247977 27248010 -223439844 - L2 LINE L2 -9 3304 3272 2025 96 36 0 chr2 27248420 27248700 -223439154 - AluSx SINE Alu -22 290 1 2268 94 0 13 chr2 27249038 27249347 -223438507 - AluSg SINE Alu -5 305 1 1889 151 3 19 chr2 27249348 27249665 -223438189 - AluJo SINE Alu 0 312 1 374 290 142 18 chr2 27251723 27251892 -223435962 - MIR3 SINE MIR -7 201 12 2013 137 3 0 chr2 27252020 27252312 -223435542 - AluSx SINE Alu -19 293 1 1815 155 23 16 chr2 27252343 27252652 -223435202 + AluJo SINE Alu 1 311 -1 195 273 227 55 chr2 27253800 27253845 -223434009 - MIR SINE MIR -72 190 154 225 94 0 0 chr2 27253845 27253877 -223433977 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 2149 102 0 0 chr2 27253877 27254162 -223433692 - AluSx SINE Alu -27 285 1 195 273 227 55 chr2 27254162 27254243 -223433611 - MIR SINE MIR -107 155 41 344 219 14 0 chr2 27254526 27254599 -223433255 - MIR SINE MIR -105 103 30 306 293 50 7 chr2 27255806 27255946 -223431908 + MIR3 SINE MIR 48 193 -15 2053 121 10 0 chr2 27256358 27256665 -223431189 - AluSx SINE Alu -2 310 1 2075 96 39 0 chr2 27256665 27256946 -223430908 - AluSx SINE Alu -20 292 1 2188 86 0 0 chr2 27257053 27257362 -223430492 - AluSx SINE Alu 0 311 3 832 161 22 83 chr2 27257624 27257854 -223430000 + AluJo SINE Alu 87 302 -10 1872 156 0 3 chr2 27257954 27258255 -223429599 + AluSx SINE Alu 13 312 0 2165 112 0 3 chr2 27258255 27258560 -223429294 + AluSg SINE Alu 1 304 -6 2234 95 10 0 chr2 27258627 27258933 -223428921 - AluSq SINE Alu -4 309 1 241 384 0 30 chr2 27258945 27259078 -223428776 - MIR SINE MIR -124 138 10 273 282 86 55 chr2 27261904 27262067 -223425787 + MIR3 SINE MIR 18 185 -23 267 196 0 0 chr2 27262210 27262261 -223425593 + MIR3 SINE MIR 155 205 -3 304 231 131 62 chr2 27262607 27262737 -223425117 + MIR SINE MIR 30 168 -94 2006 117 3 10 chr2 27263392 27263683 -223424171 - AluSx SINE Alu -23 289 1 436 275 161 21 chr2 27264104 27264340 -223423514 + L3 LINE CR1 1140 1408 -169 2197 69 17 3 chr2 27265626 27265915 -223421939 - AluY SINE Alu -18 293 1 2155 99 10 0 chr2 27265917 27266210 -223421644 - AluSq SINE Alu -17 296 1 519 156 0 56 chr2 27266236 27266256 -223421598 + AluJo SINE Alu 33 53 -259 4308 85 0 18 chr2 27266256 27266644 -223421210 + MER41A LTR ERV1 1 377 -177 2137 115 7 0 chr2 27266644 27266948 -223420906 + AluSq SINE Alu 1 306 -7 4308 85 0 18 chr2 27266948 27267123 -223420731 + MER41A LTR ERV1 377 554 0 519 156 0 56 chr2 27267123 27267192 -223420662 + AluJo SINE Alu 53 117 -195 1536 131 40 24 chr2 27267207 27267459 -223420395 - AluJb SINE Alu -21 291 36 194 133 0 22 chr2 27267467 27267512 -223420342 + (CTA)n Simple_repeat Simple_repeat 1 44 0 817 170 15 78 chr2 27267576 27267613 -223420241 + AluJo SINE Alu 104 142 -170 2147 89 3 3 chr2 27267613 27267938 -223419916 + AluSq SINE Alu 4 313 0 817 170 15 78 chr2 27267938 27268106 -223419748 + AluJo SINE Alu 142 296 -16 1508 123 131 0 chr2 27268110 27268362 -223419492 + AluSx SINE Alu 2 286 -16 369 0 0 0 chr2 27268365 27268406 -223419448 + (TAGA)n Simple_repeat Simple_repeat 3 43 0 856 230 6 6 chr2 27268407 27268572 -223419282 + FRAM SINE Alu 1 165 -1 228 182 0 0 chr2 27270019 27270063 -223417791 + MIR SINE MIR 27 70 -138 1869 140 0 3 chr2 27270080 27270366 -223417488 - AluJb SINE Alu -9 303 19 1669 243 98 25 chr2 27270929 27271021 -223416833 + MLT1J LTR MaLR 3 87 -424 1994 146 0 0 chr2 27271021 27271322 -223416532 + AluSx SINE Alu 1 301 -11 1669 243 98 25 chr2 27271322 27271699 -223416155 + MLT1J LTR MaLR 87 506 -5 2108 100 7 3 chr2 27272474 27272764 -223415090 + AluSq SINE Alu 1 291 -22 841 102 0 88 chr2 27272863 27273010 -223414844 + AluSg/x SINE Alu 163 296 -16 603 185 39 23 chr2 27273142 27273272 -223414582 - FLAM_A SINE Alu -1 132 1 364 306 12 0 chr2 27273281 27273366 -223414488 - L1MC4 LINE L1 -1338 6704 6619 1849 127 7 3 chr2 27273366 27273650 -223414204 - AluJb SINE Alu -27 285 1 283 251 103 55 chr2 27273656 27273947 -223413907 - L1MEd LINE L1 -5214 905 601 2179 103 0 0 chr2 27274020 27274310 -223413544 - AluSc SINE Alu -19 290 1 2002 113 20 13 chr2 27276251 27276552 -223411302 + AluSq SINE Alu 8 310 -3 2076 116 3 16 chr2 27276560 27276871 -223410983 + AluSx SINE Alu 1 307 -5 916 251 25 77 chr2 27277052 27277232 -223410622 + HAL1b LINE L1 733 921 -427 2134 97 3 3 chr2 27277232 27277521 -223410333 - AluSc SINE Alu -20 289 1 916 251 25 77 chr2 27277521 27277552 -223410302 + HAL1b LINE L1 921 952 -396 1749 176 0 3 chr2 27277552 27277854 -223410000 + AluJb SINE Alu 1 301 -11 916 251 25 77 chr2 27277854 27278072 -223409782 + HAL1b LINE L1 952 1141 -207 189 74 0 0 chr2 27278072 27278099 -223409755 + (TTAG)n Simple_repeat Simple_repeat 2 28 0 726 93 75 0 chr2 27278100 27278207 -223409647 - AluJb SINE Alu -197 115 1 2267 82 3 0 chr2 27278304 27278609 -223409245 - AluY SINE Alu -5 306 1 2128 109 0 0 chr2 27278615 27278908 -223408946 - AluSc SINE Alu -15 294 2 747 183 8 15 chr2 27278912 27279043 -223408811 - FLAM_C SINE Alu -3 130 1 1532 176 44 10 chr2 27279052 27279348 -223408506 - AluSx SINE Alu -6 306 1 884 192 0 0 chr2 27279943 27280099 -223407755 - AluJo SINE Alu -37 275 120 721 281 32 56 chr2 27280190 27280538 -223407316 + L2 LINE L2 1426 1764 -1550 1613 191 3 7 chr2 27280538 27280836 -223407018 - AluJo SINE Alu -15 297 1 721 281 32 56 chr2 27280836 27280918 -223406936 + L2 LINE L2 1764 1846 -1468 1445 161 11 62 chr2 27331748 27331855 -223355999 + AluJb SINE Alu 27 138 -174 2310 81 10 0 chr2 27331855 27332152 -223355702 + AluY SINE Alu 1 300 -11 1445 161 11 62 chr2 27332152 27332304 -223355550 + AluJb SINE Alu 138 273 -39 375 306 0 12 chr2 27332637 27332807 -223355047 + L1MC/D LINE L1 5266 5433 -2352 2188 79 4 0 chr2 27333073 27333384 -223354470 - AluY SINE Alu 0 312 1 947 148 7 7 chr2 27333515 27333664 -223354190 - AluJb SINE Alu -26 286 138 1933 135 10 7 chr2 27333674 27333971 -223353883 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 27333974 27333995 -223353859 + AT_rich Low_complexity Low_complexity 1 21 0 338 115 0 19 chr2 27334421 27334473 -223353381 - MLT1A2 LTR MaLR -323 51 1 730 241 5 9 chr2 27334473 27334685 -223353169 - L1M4 LINE L1 -2139 4007 3797 316 197 0 16 chr2 27334678 27334739 -223353115 + L1 LINE L1 4092 4151 -1995 * 328 226 3 57 chr2 27334743 27334830 -223353024 - L1MCa LINE L1 -4649 1733 1664 1558 180 0 8 chr2 27334830 27335086 -223352768 + AluJo SINE Alu 1 254 -58 328 226 3 57 chr2 27335086 27335104 -223352750 - L1MCa LINE L1 -4718 1664 1647 274 301 49 7 chr2 27335136 27335279 -223352575 - L1MCa LINE L1 -4769 1615 1467 2096 105 3 14 chr2 27335292 27335588 -223352266 + AluSc SINE Alu 1 293 -16 791 152 37 30 chr2 27335738 27335902 -223351952 + L1MA7 LINE L1 6115 6279 -12 1523 181 61 4 chr2 27335907 27336184 -223351670 - AluSx SINE Alu -19 293 1 306 306 81 77 chr2 27336329 27336488 -223351366 + L1MEd LINE L1 547 709 -5496 2531 50 0 3 chr2 27336488 27336785 -223351069 + AluY SINE Alu 1 296 -15 306 306 81 77 chr2 27336785 27336834 -223351020 + L1MEd LINE L1 709 756 -5449 503 248 48 0 chr2 27336835 27336980 -223350874 - MER104 DNA Tc2 -1 179 28 2399 94 0 3 chr2 27337081 27337389 -223350465 + AluSc SINE Alu 2 308 -1 318 267 67 22 chr2 27337523 27337658 -223350196 + L1MEd LINE L1 2002 2142 -4254 1092 266 31 65 chr2 27338356 27338719 -223349135 - L1 LINE L1 -1871 4275 3901 2175 134 0 0 chr2 27338719 27339026 -223348828 - AluSx SINE Alu -5 307 1 1092 266 31 65 chr2 27339026 27339186 -223348668 - L1 LINE L1 -2245 3901 3786 2164 132 3 3 chr2 27339186 27339496 -223348358 - AluSx SINE Alu -1 311 2 1092 266 31 65 chr2 27339496 27339672 -223348182 - L1 LINE L1 -2360 3786 3606 2046 136 74 47 chr2 27339800 27340135 -223347719 - MLT2C2 LTR ERVL -48 416 67 2151 98 39 0 chr2 27340135 27340421 -223347433 - AluSc SINE Alu -12 297 1 2046 136 74 47 chr2 27340421 27340490 -223347364 - MLT2C2 LTR ERVL -397 67 1 3438 179 29 8 chr2 27340491 27341327 -223346527 - L1M4 LINE L1 -1091 5055 4107 307 212 0 15 chr2 27341510 27341576 -223346278 - MLT-int LTR MaLR -992 743 679 189 147 0 0 chr2 27343714 27343748 -223344106 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 420 189 142 0 chr2 27344198 27344304 -223343550 - MIR3 SINE MIR -44 164 44 1089 299 98 27 chr2 27345366 27345377 -223342477 + L1MEd LINE L1 81 90 -6029 2143 96 50 0 chr2 27345377 27345657 -223342197 - AluSx SINE Alu -18 294 1 1089 299 98 27 chr2 27345657 27346156 -223341698 + L1MEd LINE L1 90 627 -5492 1953 125 3 77 chr2 27346176 27346331 -223341523 + AluJb SINE Alu 1 119 -193 2299 107 0 3 chr2 27346331 27346629 -223341225 + AluSx SINE Alu 1 297 -15 1953 125 3 77 chr2 27346629 27346809 -223341045 + AluJb SINE Alu 119 311 -1 364 273 8 8 chr2 27346810 27346942 -223340912 + L1M4 LINE L1 3330 3461 -2685 561 301 17 7 chr2 27346994 27347290 -223340564 + L1M4 LINE L1 4271 4569 -1577 402 77 0 0 chr2 27347290 27347342 -223340512 - Alu SINE Alu -15 296 245 189 0 0 0 chr2 27347442 27347463 -223340391 + (A)n Simple_repeat Simple_repeat 1 21 0 542 103 23 11 chr2 27347599 27347686 -223340168 - L1MC1 LINE L1 0 6333 6246 24 0 0 0 chr2 27347994 27348018 -223339836 + AT_rich Low_complexity Low_complexity 1 24 0 6594 67 8 68 chr2 27348018 27349026 -223338828 - SVA Other Other -6 1380 433 1335 66 40 13 chr2 27349043 27349269 -223338585 - SVA Other Other -520 866 635 5543 75 28 62 chr2 27349295 27350192 -223337662 - SVA Other Other -520 866 1 372 253 0 0 chr2 27350224 27350303 -223337551 + L2 LINE L2 3193 3271 -1 793 179 39 62 chr2 27350486 27350533 -223337321 - MER3 DNA MER1_type 0 209 162 1732 156 28 10 chr2 27350533 27350822 -223337032 - AluJo SINE Alu -18 294 1 793 179 39 62 chr2 27350822 27350864 -223336990 - MER3 DNA MER1_type -47 162 121 2392 97 7 0 chr2 27350864 27351172 -223336682 + AluSx SINE Alu 1 310 -2 793 179 39 62 chr2 27351172 27351260 -223336594 - MER3 DNA MER1_type -88 121 35 1554 106 75 78 chr2 27351565 27351858 -223335996 + AluSx SINE Alu 3 294 -18 24 67 0 0 chr2 27352050 27352095 -223335759 + AT_rich Low_complexity Low_complexity 1 45 0 1410 203 22 22 chr2 27352950 27353271 -223334583 - L1ME2 LINE L1 -1 6163 5843 2128 126 0 41 chr2 27353278 27353596 -223334258 - AluSx SINE Alu -7 305 1 2243 128 0 0 chr2 27353774 27354071 -223333783 - AluSx SINE Alu -15 297 1 1424 213 52 30 chr2 27354175 27354316 -223333538 - L1ME2 LINE L1 -524 5640 5504 1810 157 44 0 chr2 27354316 27354609 -223333245 - AluSx SINE Alu -4 308 3 1424 213 52 30 chr2 27354609 27355180 -223332674 - L1ME2 LINE L1 -660 5504 4917 758 170 6 29 chr2 27355181 27355279 -223332575 - MER96B DNA MER1_type? -1 416 322 1783 199 3 0 chr2 27355279 27355580 -223332274 - AluJb SINE Alu -10 302 1 758 170 6 29 chr2 27355580 27355652 -223332202 - MER96B DNA MER1_type? -95 322 250 1505 252 43 19 chr2 27355711 27355926 -223331928 - L1ME2 LINE L1 -1225 4921 4713 2219 118 7 3 chr2 27355926 27356223 -223331631 - AluSx SINE Alu -14 298 1 1505 252 43 19 chr2 27356223 27356468 -223331386 - L1ME2 LINE L1 -1433 4713 4450 590 189 220 70 chr2 27356497 27356724 -223331130 - L1MC5 LINE L1 -30 7931 7651 2335 72 41 0 chr2 27356724 27357015 -223330839 - AluY SINE Alu -6 305 3 590 189 220 70 chr2 27357015 27357073 -223330781 - L1MC5 LINE L1 -310 7651 7603 526 156 0 0 chr2 27357076 27357153 -223330701 + AluJ/FLAM SINE Alu 3 79 -233 34 0 0 0 chr2 27357334 27357368 -223330486 + AT_rich Low_complexity Low_complexity 1 34 0 423 300 46 49 chr2 27357368 27357540 -223330314 + L1ME3A LINE L1 1909 2080 -4135 1213 184 23 5 chr2 27357540 27357757 -223330097 - MER58A DNA MER1_type -3 221 1 423 300 46 49 chr2 27357757 27357862 -223329992 + L1ME3A LINE L1 2080 2131 -4084 2143 117 7 7 chr2 27357862 27358160 -223329694 + AluSx SINE Alu 7 304 -8 423 300 46 49 chr2 27358160 27358276 -223329578 + L1ME3A LINE L1 2131 2246 -3969 262 157 14 29 chr2 27358354 27358424 -223329430 + L1ME3A LINE L1 2323 2391 -3824 2704 153 22 24 chr2 27358438 27358896 -223328958 - LTR32 LTR ERVL 0 471 15 517 95 14 14 chr2 27358876 27358950 -223328904 - LTR32 LTR ERVL -383 88 15 * 2021 252 127 22 chr2 27358950 27359957 -223327897 + L1ME3A LINE L1 2401 3513 -2702 589 204 0 9 chr2 27359978 27360086 -223327768 + FLAM_A SINE Alu 12 118 -24 752 285 29 36 chr2 27360138 27360390 -223327464 + L1ME3A LINE L1 3542 3793 -2422 2213 119 0 0 chr2 27360390 27360683 -223327171 + AluJb SINE Alu 1 293 -19 752 285 29 36 chr2 27360683 27360739 -223327115 + L1ME3A LINE L1 3793 3848 -2367 1011 249 29 21 chr2 27360743 27361024 -223326830 + L1ME3A LINE L1 5436 5718 -513 929 182 22 11 chr2 27361037 27361218 -223326636 + MER5A DNA MER1_type 7 189 0 624 258 72 19 chr2 27361222 27361486 -223326368 + L1ME3A LINE L1 5722 5999 -240 200 93 70 0 chr2 27361499 27361542 -223326312 + (TA)n Simple_repeat Simple_repeat 1 46 0 194 284 147 0 chr2 27361554 27361656 -223326198 + L2 LINE L2 2233 2349 -965 2349 82 3 0 chr2 27362223 27362514 -223325340 + AluSc SINE Alu 1 292 -17 561 232 148 7 chr2 27363770 27363925 -223323929 - MER5A DNA MER1_type -6 183 7 2281 106 3 0 chr2 27364052 27364355 -223323499 + AluSx SINE Alu 1 304 -8 6970 68 15 19 chr2 27364609 27366217 -223321637 - SVA Other Other -683 1386 57 216 0 0 0 chr2 27366217 27366241 -223321613 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 419 267 92 63 chr2 27366405 27366611 -223321243 + MIR SINE MIR 32 243 -19 183 306 41 50 chr2 27366624 27366745 -223321109 + MIR SINE MIR 74 193 -69 185 298 0 18 chr2 27367572 27367629 -223320225 + MIR SINE MIR 21 76 -132 1220 96 23 105 chr2 27367699 27367918 -223319936 - AluSg/x SINE Alu -27 283 83 1373 151 114 41 chr2 27368183 27368285 -223319569 + AluJb SINE Alu 1 94 -218 2360 82 3 0 chr2 27368285 27368579 -223319275 + AluSq SINE Alu 1 295 -18 1373 151 114 41 chr2 27368579 27368747 -223319107 + AluJb SINE Alu 94 291 -21 2085 106 32 0 chr2 27368854 27369137 -223318717 + AluSx SINE Alu 1 292 -20 683 265 29 20 chr2 27369152 27369356 -223318498 + MIR SINE MIR 57 262 0 2062 142 7 7 chr2 27369494 27369797 -223318057 + AluSx SINE Alu 1 303 -9 218 250 80 30 chr2 27370802 27370902 -223316952 + L2 LINE L2 3165 3269 -3 232 274 0 0 chr2 27371535 27371597 -223316257 + T-rich Low_complexity Low_complexity 1 62 0 2427 60 0 0 chr2 27372125 27372428 -223315426 - AluY SINE Alu 0 303 1 1525 139 0 54 chr2 27373478 27373736 -223314118 + AluJb SINE Alu 58 301 -11 1938 100 30 7 chr2 27374173 27374444 -223313410 + AluSq SINE Alu 21 297 -16 2253 100 3 0 chr2 27374455 27374756 -223313098 + AluSx SINE Alu 1 302 -10 2346 95 7 3 chr2 27374900 27375204 -223312650 + AluSg SINE Alu 2 306 -4 384 22 0 0 chr2 27375267 27375312 -223312542 + (TG)n Simple_repeat Simple_repeat 1 45 0 2457 78 0 3 chr2 27377432 27377728 -223310126 + AluY SINE Alu 1 295 -16 276 347 41 14 chr2 27377978 27378125 -223309729 - L2 LINE L2 -1 3271 3121 707 204 0 0 chr2 27378129 27378242 -223309612 + FLAM_A SINE Alu 1 113 -29 1883 150 0 11 chr2 27379611 27379920 -223307934 + AluJb SINE Alu 1 306 0 775 232 18 12 chr2 27380305 27380469 -223307385 + FRAM SINE Alu 2 166 0 241 154 0 0 chr2 27380579 27380618 -223307236 - MIR3 SINE MIR -3 205 167 933 104 0 71 chr2 27380804 27380958 -223306896 + FLAM_C SINE Alu 1 143 0 448 214 188 0 chr2 27380963 27381075 -223306779 + MIR SINE MIR 28 160 -102 694 115 10 0 chr2 27381139 27381235 -223306619 + U6 snRNA snRNA 4 100 -7 586 261 170 38 chr2 27381404 27381884 -223305970 - L1M4 LINE L1 -517 5645 5028 2472 93 0 0 chr2 27381884 27382195 -223305659 + AluSq SINE Alu 1 311 -2 586 261 170 38 chr2 27382195 27382428 -223305426 - L1M4 LINE L1 -1134 5028 4827 243 271 14 0 chr2 27382555 27382625 -223305229 + MIR SINE MIR 81 151 -57 2311 110 3 0 chr2 27382628 27382936 -223304918 + AluSq SINE Alu 1 309 -4 1545 68 16 0 chr2 27383124 27383315 -223304539 + AluY SINE Alu 1 194 -117 293 145 15 0 chr2 27383445 27383498 -223304356 - Alu SINE Alu -268 40 1 2183 95 3 30 chr2 27384516 27384820 -223303034 - AluSx SINE Alu -15 297 2 937 185 10 36 chr2 27386225 27386479 -223301375 - AluJo SINE Alu 0 371 123 2028 116 7 14 chr2 27386722 27387015 -223300839 - AluSx SINE Alu -17 295 5 303 313 75 52 chr2 27387030 27387151 -223300703 - L1MEc LINE L1 -4563 1833 1716 2208 127 3 0 chr2 27387151 27387458 -223300396 - AluSx SINE Alu -4 308 1 303 313 75 52 chr2 27387458 27387643 -223300211 - L1MEc LINE L1 -4680 1716 1520 2379 90 0 3 chr2 27387690 27388001 -223299853 - AluSg SINE Alu 0 310 1 2074 121 3 17 chr2 27388100 27388398 -223299456 - AluSg SINE Alu -16 294 1 1865 141 44 3 chr2 27388762 27389059 -223298795 - AluSx SINE Alu -3 309 1 2137 132 0 7 chr2 27389199 27389502 -223298352 - AluSq SINE Alu -12 301 1 27 29 0 0 chr2 27389502 27389536 -223298318 + AT_rich Low_complexity Low_complexity 1 34 0 649 148 129 77 chr2 27389631 27389786 -223298068 - AluJo SINE Alu -64 248 86 2143 75 11 14 chr2 27389792 27390139 -223297715 - AluY SINE Alu 0 346 1 968 181 65 75 chr2 27390759 27390807 -223297047 - L1MB7 LINE L1 -42 6142 6095 2262 132 0 3 chr2 27390807 27391117 -223296737 - AluSx SINE Alu 0 312 4 968 181 65 75 chr2 27391117 27391360 -223296494 - L1MB7 LINE L1 -89 6095 5854 789 220 0 0 chr2 27392050 27392191 -223295663 - FLAM_C SINE Alu -1 142 2 2117 131 0 16 chr2 27392235 27392549 -223295305 - AluSx SINE Alu -3 309 1 2130 164 43 49 chr2 27392550 27393039 -223294815 - L1MB7 LINE L1 -311 5873 5388 1398 134 5 5 chr2 27393063 27393272 -223294582 - AluSx SINE Alu -103 209 1 2773 151 65 34 chr2 27393278 27393465 -223294389 - L1MB7 LINE L1 -748 5398 5218 1895 118 20 20 chr2 27393465 27393809 -223294045 - AluSx SINE Alu 0 312 5 2773 151 65 34 chr2 27393809 27393826 -223294028 - L1MB7 LINE L1 -928 5218 5203 2567 81 0 0 chr2 27393826 27394134 -223293720 - AluSc SINE Alu -1 308 1 2773 151 65 34 chr2 27394134 27394577 -223293277 - L1MB7 LINE L1 -943 5203 4730 423 224 19 0 chr2 27394587 27394694 -223293160 - L1MB7 LINE L1 -1481 4665 4557 275 229 0 0 chr2 27394726 27394787 -223293067 - L1MB7 LINE L1 -2128 4018 3958 1231 169 9 23 chr2 27394791 27395010 -223292844 - AluJo SINE Alu -12 300 85 1975 196 35 12 chr2 27395011 27395491 -223292363 - L1MB7 LINE L1 -2183 3963 3473 2056 137 7 0 chr2 27395504 27395797 -223292057 + AluSp SINE Alu 1 295 -18 1303 168 17 46 chr2 27395802 27395830 -223292024 - L1MB2 LINE L1 -24 6147 6120 2357 104 0 3 chr2 27395830 27396139 -223291715 - AluSx SINE Alu -4 308 1 1303 168 17 46 chr2 27396139 27396393 -223291461 - L1MB2 LINE L1 -51 6120 5860 2258 87 3 3 chr2 27396393 27396682 -223291172 - AluSx SINE Alu -23 289 1 1303 168 17 46 chr2 27396682 27396790 -223291064 - L1MB2 LINE L1 -311 5860 5476 1603 194 19 13 chr2 27396801 27397110 -223290744 - AluJo SINE Alu -1 311 1 1960 137 11 0 chr2 27397112 27397396 -223290458 - AluSx SINE Alu 0 312 26 2368 112 0 13 chr2 27397408 27397721 -223290133 - AluSx SINE Alu -1 311 3 29 0 0 0 chr2 27397721 27397750 -223290104 + AT_rich Low_complexity Low_complexity 1 29 0 2300 76 6 45 chr2 27397906 27398220 -223289634 - AluSc SINE Alu -7 302 1 2257 80 7 14 chr2 27398478 27398609 -223289245 + AluSx SINE Alu 5 135 -177 2301 100 3 3 chr2 27398609 27398919 -223288935 + AluY SINE Alu 1 310 -1 2257 80 7 14 chr2 27398919 27399076 -223288778 + AluSx SINE Alu 135 291 -21 2158 127 3 7 chr2 27400082 27400389 -223287465 + AluSx SINE Alu 6 311 -1 2470 87 0 3 chr2 27400640 27400949 -223286905 + AluSc SINE Alu 1 308 -1 4579 157 31 32 chr2 27401023 27402023 -223285831 + L1PA16 LINE L1 5171 6166 0 693 179 43 0 chr2 27402103 27402220 -223285634 - FLAM_C SINE Alu -13 130 9 1845 147 41 10 chr2 27402351 27402643 -223285211 + AluSq SINE Alu 1 301 -12 1633 181 7 17 chr2 27402688 27402987 -223284867 - AluJo SINE Alu -16 296 1 216 200 0 0 chr2 27403391 27403441 -223284413 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 247 314 94 57 chr2 27403458 27403617 -223284237 - MIR SINE MIR -50 212 48 2491 70 0 0 chr2 27403777 27404076 -223283778 - AluY SINE Alu -12 299 1 1958 137 0 0 chr2 27404348 27404618 -223283236 - AluY SINE Alu -41 270 1 542 272 47 112 chr2 27404634 27404855 -223282999 - L1MEd LINE L1 -4862 1257 1023 1812 124 0 104 chr2 27404855 27405202 -223282652 - AluJo SINE Alu -1 311 1 542 272 47 112 chr2 27405202 27405482 -223282372 - L1MEd LINE L1 -5096 1023 817 1779 149 14 14 chr2 27405482 27405763 -223282091 - AluJo SINE Alu -31 281 1 542 272 47 112 chr2 27405763 27406003 -223281851 - L1MEd LINE L1 -5302 817 563 2441 88 0 0 chr2 27407273 27407568 -223280286 + AluSg SINE Alu 1 295 -15 1965 164 7 0 chr2 27407576 27407881 -223279973 + AluSx SINE Alu 1 307 -5 521 311 52 52 chr2 27407991 27408239 -223279615 + MIR SINE MIR 4 251 -11 1168 299 109 20 chr2 27408257 27408845 -223279009 + L2 LINE L2 2451 3140 -173 1411 59 99 59 chr2 27408845 27409066 -223278788 + MER30 DNA MER1_type 1 230 0 1168 299 109 20 chr2 27409066 27409257 -223278597 + L2 LINE L2 3140 3313 0 591 154 168 21 chr2 27410087 27410160 -223277694 - MER69A DNA AcHobo -2350 176 115 2090 116 3 7 chr2 27410160 27410454 -223277400 + AluSx SINE Alu 1 293 -19 591 154 168 21 chr2 27410454 27410523 -223277331 - MER69A DNA AcHobo -2411 115 13 8551 52 1 0 chr2 27411546 27412514 -223275340 - LTR5 LTR ERVK 0 969 1 2040 133 3 20 chr2 27414904 27415205 -223272649 - AluJb SINE Alu -16 296 1 2355 115 0 0 chr2 27415426 27415730 -223272124 - AluSx SINE Alu -8 304 1 2392 83 3 0 chr2 27416272 27416561 -223271293 - AluSc SINE Alu -19 290 1 2470 69 0 10 chr2 27416759 27417065 -223270789 - AluY SINE Alu -7 304 2 271 217 0 0 chr2 27419649 27419695 -223268159 + Tigger3(Golem) DNA MER2_type 1 46 -2983 460 164 0 0 chr2 27419699 27419766 -223268088 + AluS SINE Alu 5 71 -242 1202 165 55 21 chr2 27419782 27420018 -223267836 + Tigger3(Golem) DNA MER2_type 2786 3029 0 1400 228 85 41 chr2 27420025 27420485 -223267369 - MLT2B1 LTR ERVL -40 480 1 34 0 0 0 chr2 27420513 27420547 -223267307 + AT_rich Low_complexity Low_complexity 1 34 0 2289 73 0 11 chr2 27420684 27421008 -223266846 - AluY SINE Alu 0 321 1 799 114 43 137 chr2 27421435 27421602 -223266252 - Charlie5 DNA MER1_type 0 2585 2449 2173 128 0 3 chr2 27421602 27421900 -223265954 + AluSx SINE Alu 3 299 -13 799 114 43 137 chr2 27421900 27421987 -223265867 - Charlie5 DNA MER1_type -136 2449 2355 2484 83 0 10 chr2 27424093 27424407 -223263447 + AluY SINE Alu 1 311 0 196 244 0 0 chr2 27425306 27425347 -223262507 - L3b LINE CR1 -9 1574 1534 1983 114 0 77 chr2 27425353 27425493 -223262361 + AluSx SINE Alu 5 107 -205 2802 13 0 31 chr2 27425493 27425810 -223262044 + AluYb8 SINE Alu 1 307 -11 1983 114 0 77 chr2 27425810 27425993 -223261861 + AluSx SINE Alu 107 303 -9 2378 100 0 3 chr2 27427544 27427844 -223260010 + AluSx SINE Alu 3 301 -11 2350 77 13 3 chr2 27428599 27428898 -223258956 - AluSx SINE Alu -10 302 1 202 259 0 0 chr2 27429926 27429980 -223257874 + (CGGGG)n Simple_repeat Simple_repeat 2 55 0 236 250 36 0 chr2 27430121 27430205 -223257649 + C-rich Low_complexity Low_complexity 2 88 0 2184 129 10 0 chr2 27432186 27432489 -223255365 + AluSx SINE Alu 1 306 -6 215 286 0 48 chr2 27432766 27432829 -223255025 + L2 LINE L2 3191 3250 -22 2533 57 7 0 chr2 27432977 27433275 -223254579 - AluY SINE Alu -11 300 1 1720 196 3 0 chr2 27433502 27433793 -223254061 - AluJb SINE Alu -10 302 11 2265 90 31 0 chr2 27434288 27434577 -223253277 - AluSx SINE Alu -14 298 1 2533 59 0 7 chr2 27434587 27434892 -223252962 - AluY SINE Alu -8 303 1 210 211 14 42 chr2 27435309 27435380 -223252474 + C-rich Low_complexity Low_complexity 3 71 0 2283 103 3 3 chr2 27439304 27439595 -223248259 + AluSx SINE Alu 1 291 -21 1778 159 33 10 chr2 27439606 27439908 -223247946 + AluJo SINE Alu 1 309 -3 327 153 0 42 chr2 27439956 27440028 -223247826 + AluJo SINE Alu 68 136 -166 2400 103 0 0 chr2 27440334 27440636 -223247218 + AluSx SINE Alu 1 302 -10 391 289 0 11 chr2 27440947 27441037 -223246817 - L2 LINE L2 0 3313 3225 1780 168 0 30 chr2 27441163 27441466 -223246388 - AluY SINE Alu -17 294 1 1811 148 36 7 chr2 27441725 27442028 -223245826 + AluSx SINE Alu 1 312 0 470 132 0 0 chr2 27442320 27442388 -223245466 + FLAM_A SINE Alu 1 68 -64 36 53 0 0 chr2 27443410 27443467 -223244387 + GC_rich Low_complexity Low_complexity 1 57 0 279 330 58 48 chr2 27444326 27444532 -223243322 - MIR SINE MIR -2 260 53 2027 130 27 10 chr2 27444875 27445175 -223242679 + AluSx SINE Alu 1 305 -7 210 71 0 0 chr2 27445175 27445203 -223242651 + (TA)n Simple_repeat Simple_repeat 2 29 0 2224 109 0 0 chr2 27445372 27445680 -223242174 + AluSq SINE Alu 1 308 0 202 260 60 0 chr2 27445738 27445788 -223242066 + MIR SINE MIR 204 256 -6 409 253 147 13 chr2 27446153 27446208 -223241646 - L1ME4a LINE L1 -74 6047 6001 2307 101 0 3 chr2 27446208 27446504 -223241350 - AluY SINE Alu -16 295 1 409 253 147 13 chr2 27446504 27446598 -223241256 - L1ME4a LINE L1 -120 6001 5878 2350 84 7 0 chr2 27446664 27446986 -223240868 - AluSg SINE Alu 0 310 1 1935 147 3 10 chr2 27446986 27447279 -223240575 - AluSg SINE Alu -19 291 1 503 268 93 58 chr2 27447484 27447689 -223240165 - MIR SINE MIR -19 243 32 2400 89 3 0 chr2 27447907 27448209 -223239645 - AluSp SINE Alu -10 303 1 2360 88 3 13 chr2 27450352 27450658 -223237196 - AluSx SINE Alu 0 312 10 26 82 0 0 chr2 27452328 27452389 -223235465 + GC_rich Low_complexity Low_complexity 1 61 0 381 274 0 0 chr2 27452999 27453083 -223234771 - L2 LINE L2 -1 3271 3188 21 0 0 0 chr2 27453126 27453147 -223234707 + AT_rich Low_complexity Low_complexity 1 21 0 372 263 140 9 chr2 27453176 27453290 -223234564 + MIR SINE MIR 64 192 -70 398 255 147 13 chr2 27453396 27453627 -223234227 + MIR SINE MIR 1 262 0 274 328 24 40 chr2 27455182 27455307 -223232547 - MIR SINE MIR -69 193 71 306 179 26 171 chr2 27456213 27456330 -223231524 + Charlie8 DNA MER1_type 232 2407 -10 796 170 31 98 chr2 27457037 27457093 -223230761 + MER58A DNA MER1_type 1 59 -2361 2283 114 0 13 chr2 27457093 27457408 -223230446 - AluSx SINE Alu -1 311 1 796 170 31 98 chr2 27457408 27457424 -223230430 + MER58A DNA MER1_type 59 75 -2345 1320 142 36 156 chr2 27457424 27457784 -223230070 - AluYb8 SINE Alu -1 317 1 796 170 31 98 chr2 27457784 27457934 -223229920 + MER58A DNA MER1_type 75 209 -15 582 156 11 0 chr2 27457961 27458051 -223229803 + MER5A DNA MER1_type 9 99 -90 184 345 17 0 chr2 27458082 27458140 -223229714 + L3b LINE CR1 1524 1582 -1 375 259 21 124 chr2 27458240 27458433 -223229421 - MER5A DNA MER1_type 0 189 17 351 304 22 54 chr2 27459175 27459359 -223228495 - MER5B DNA MER1_type 0 178 1 205 323 89 76 chr2 27459372 27459530 -223228324 + L3 LINE CR1 1407 1566 -11 569 269 0 65 chr2 27459722 27459908 -223227946 + MER5B DNA MER1_type 1 174 -4 2191 104 35 0 chr2 27461705 27461994 -223225860 - AluSq SINE Alu -14 299 1 2376 100 3 0 chr2 27462193 27462494 -223225360 + AluSx SINE Alu 3 304 -8 2335 56 0 28 chr2 27462494 27462780 -223225074 + AluY SINE Alu 33 311 0 307 341 64 52 chr2 27464807 27464980 -223222874 + MIR3 SINE MIR 25 199 -9 2120 118 28 0 chr2 27465871 27466158 -223221696 - AluSx SINE Alu -17 295 1 249 275 132 33 chr2 27466377 27466468 -223221386 + MIR SINE MIR 34 133 -75 1746 190 0 7 chr2 27466682 27466987 -223220867 - AluJb SINE Alu -9 303 1 457 254 112 76 chr2 27467044 27467347 -223220507 - L1ME4a LINE L1 -23 6098 5785 2450 64 3 3 chr2 27467358 27467653 -223220201 - AluY SINE Alu -16 295 1 718 267 43 12 chr2 27467659 27467917 -223219937 - L1ME LINE L1 -298 5823 5558 1942 136 3 14 chr2 27468265 27468560 -223219294 + AluJb SINE Alu 1 292 -20 2219 129 3 3 chr2 27468566 27468876 -223218978 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 27470075 27470099 -223217755 + AT_rich Low_complexity Low_complexity 1 24 0 459 306 64 61 chr2 27470099 27470222 -223217632 - L1ME4a LINE L1 -2192 5616 5495 2090 103 0 35 chr2 27470222 27470551 -223217303 - AluSc SINE Alu 0 319 1 459 306 64 61 chr2 27470551 27470786 -223217068 - L1ME4a LINE L1 -2313 5495 5256 911 177 7 0 chr2 27471107 27471248 -223216606 - AluJb SINE Alu -39 273 132 2334 84 10 0 chr2 27471259 27471556 -223216298 - AluY SINE Alu -11 300 1 30 0 0 0 chr2 27471691 27471721 -223216133 + AT_rich Low_complexity Low_complexity 1 30 0 2281 82 14 0 chr2 27471754 27472048 -223215806 - AluY SINE Alu -13 298 1 943 166 12 6 chr2 27472164 27472327 -223215527 - AluJb SINE Alu -11 301 138 1638 166 17 10 chr2 27472337 27472633 -223215221 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 27472636 27472657 -223215197 + AT_rich Low_complexity Low_complexity 1 21 0 312 241 48 0 chr2 27472956 27473039 -223214815 + MER88 LTR ERVL 79 165 -299 264 328 15 37 chr2 27472969 27473103 -223214751 - MER74B LTR ERVL -75 547 417 * 1680 176 7 0 chr2 27473108 27473381 -223214473 - AluSq SINE Alu -38 275 1 2317 70 7 3 chr2 27473392 27473676 -223214178 - AluSg SINE Alu -17 293 9 442 237 61 0 chr2 27473684 27473798 -223214056 - MER74B LTR ERVL -191 431 311 519 156 0 0 chr2 27474228 27474305 -223213549 + FLAM_A SINE Alu 31 107 -35 27 0 0 0 chr2 27474308 27474335 -223213519 + AT_rich Low_complexity Low_complexity 1 27 0 2273 95 0 0 chr2 27474468 27474753 -223213101 - AluSx SINE Alu -23 289 5 2125 126 3 32 chr2 27474836 27475033 -223212821 - AluSx SINE Alu -8 304 118 2210 103 14 0 chr2 27475033 27475325 -223212529 - AluSg SINE Alu -14 296 1 2125 126 3 32 chr2 27475325 27475437 -223212417 - AluSx SINE Alu -194 118 4 2682 49 0 3 chr2 27475596 27475903 -223211951 - AluY SINE Alu -5 306 1 1019 102 0 0 chr2 27476153 27476281 -223211573 - AluSq/x SINE Alu -184 128 1 388 319 80 0 chr2 27476459 27476597 -223211257 - MIR SINE MIR -48 214 66 213 121 0 0 chr2 27476650 27476683 -223211171 + (A)n Simple_repeat Simple_repeat 1 33 0 741 229 0 0 chr2 27476685 27476807 -223211047 + FLAM_A SINE Alu 3 124 -9 186 200 0 0 chr2 27476807 27476845 -223211009 + GA-rich Low_complexity Low_complexity 7 47 0 586 136 0 0 chr2 27476868 27476956 -223210898 - AluSg/x SINE Alu -7 303 216 202 275 67 33 chr2 27477108 27477228 -223210626 + L2 LINE L2 2347 2470 -844 * 274 303 104 74 chr2 27477216 27477447 -223210407 - L2 LINE L2 0 3313 3076 292 83 42 0 chr2 27477633 27477681 -223210173 - Alu SINE Alu -4 297 248 21 0 0 0 chr2 27478064 27478085 -223209769 + AT_rich Low_complexity Low_complexity 1 21 0 2092 123 0 7 chr2 27478107 27478408 -223209446 - AluY SINE Alu -12 299 1 2232 91 3 7 chr2 27478421 27478719 -223209135 - AluSx SINE Alu -15 297 1 326 173 62 37 chr2 27478720 27478801 -223209053 + MER74B LTR ERVL 91 173 -449 2279 111 0 3 chr2 27478801 27479098 -223208756 - AluSx SINE Alu -16 296 1 1864 96 56 8 chr2 27479245 27479496 -223208358 - AluSc SINE Alu -46 263 1 283 269 212 60 chr2 27479720 27480304 -223207550 - L2 LINE L2 -1298 2016 1344 286 316 199 15 chr2 27480341 27480683 -223207171 - L2 LINE L2 -2136 1178 774 950 144 144 34 chr2 27480808 27481044 -223206810 + AluY SINE Alu 42 303 -8 26 0 0 0 chr2 27482620 27482646 -223205208 + AT_rich Low_complexity Low_complexity 1 26 0 713 76 0 0 chr2 27483252 27483344 -223204510 + AluSp/q SINE Alu 205 296 -17 2205 44 106 0 chr2 27483349 27483623 -223204231 + AluY SINE Alu 1 303 -8 27 0 0 0 chr2 27485205 27485232 -223202622 + AT_rich Low_complexity Low_complexity 1 27 0 2042 130 7 0 chr2 27486050 27486343 -223201511 - AluSp SINE Alu -17 296 2 238 173 24 4 chr2 27486345 27486395 -223201459 - MIR SINE MIR -59 149 98 2010 116 14 17 chr2 27486635 27486929 -223200925 - AluSg SINE Alu -17 293 1 1865 141 44 3 chr2 27487293 27487590 -223200264 - AluSx SINE Alu -3 309 1 2298 123 0 0 chr2 27487730 27488031 -223199823 - AluSq SINE Alu -12 301 1 614 71 0 0 chr2 27488042 27488126 -223199728 - L1PA6 LINE L1 -6 6148 6065 341 290 164 19 chr2 27488149 27488233 -223199621 - L1MC4 LINE L1 -31 8011 7941 2466 93 3 3 chr2 27488233 27488546 -223199308 - AluSp SINE Alu 0 313 1 341 290 164 19 chr2 27488546 27488668 -223199186 - L1MC4 LINE L1 -101 7941 7775 2280 113 7 7 chr2 27489087 27489397 -223198457 - AluSx SINE Alu -2 310 1 1735 163 13 49 chr2 27489402 27489560 -223198294 - AluJo SINE Alu -17 295 152 2268 106 0 7 chr2 27489560 27489862 -223197992 - AluSx SINE Alu -12 300 1 964 137 0 41 chr2 27489863 27490009 -223197845 - AluJo SINE Alu -172 140 1 966 181 33 0 chr2 27490125 27490307 -223197547 - MER5A DNA MER1_type -1 188 1 1796 123 11 0 chr2 27490433 27490693 -223197161 - AluSx SINE Alu -11 301 39 596 178 8 34 chr2 27490744 27490862 -223196992 - AluJo/FRAM SINE Alu -44 268 154 1477 190 7 19 chr2 27490746 27491015 -223196839 - AluJb SINE Alu -46 266 1 1281 167 0 33 chr2 27491072 27491282 -223196572 + AluJo SINE Alu 87 289 -23 2016 104 22 22 chr2 27491470 27491748 -223196106 + AluSx SINE Alu 1 278 -34 471 327 105 44 chr2 27491752 27492085 -223195769 - L1ME2 LINE L1 -267 5854 5496 278 248 90 21 chr2 27492086 27492231 -223195623 - L1ME2 LINE L1 -2330 5478 5324 2432 61 10 0 chr2 27492232 27492526 -223195328 + AluSq SINE Alu 1 297 -16 251 119 85 68 chr2 27492767 27492826 -223195028 - MER113 DNA MER1_type? -3 518 459 284 221 63 0 chr2 27492949 27493044 -223194810 - MER113 DNA MER1_type? -410 111 11 2180 112 3 0 chr2 27494176 27494462 -223193392 - AluSx SINE Alu -25 287 1 2269 73 4 0 chr2 27494824 27495131 -223192723 - AluSx SINE Alu 0 313 6 26 30 0 0 chr2 27495136 27495169 -223192685 + AT_rich Low_complexity Low_complexity 1 33 0 1412 188 108 42 chr2 27495430 27495614 -223192240 - MLT1D LTR MaLR 0 505 335 2174 91 31 7 chr2 27495614 27495901 -223191953 - AluSx SINE Alu -18 294 1 1412 188 108 42 chr2 27495901 27496094 -223191760 - MLT1D LTR MaLR -170 335 103 1294 99 0 0 chr2 27496127 27496317 -223191537 + AluSg/x SINE Alu 120 309 0 2005 122 14 0 chr2 27496318 27496614 -223191240 + AluSx SINE Alu 1 300 -12 284 292 44 51 chr2 27496940 27497077 -223190777 + MER5A DNA MER1_type 25 160 -29 992 171 6 12 chr2 27497357 27497521 -223190333 + FRAM SINE Alu 4 166 0 228 185 108 31 chr2 27497523 27497588 -223190266 - L1MB8 LINE L1 -44 6134 6065 839 126 57 34 chr2 27497670 27497845 -223190009 + L1M2 LINE L1 5126 5304 -842 1380 154 0 9 chr2 27497845 27498059 -223189795 + AluSx SINE Alu 1 212 -100 564 59 0 0 chr2 27498059 27498127 -223189727 + AluSp SINE Alu 78 145 -168 2284 108 3 16 chr2 27498127 27498443 -223189411 + AluSq SINE Alu 1 312 -1 1466 120 34 48 chr2 27498450 27498741 -223189113 + L1M2 LINE L1 5324 5610 -702 225 188 9 9 chr2 27499006 27499078 -223188776 + G-rich Low_complexity Low_complexity 1 72 0 2093 73 22 0 chr2 27499209 27499523 -223188331 + AluY SINE Alu 1 320 0 350 242 184 81 chr2 27499530 27499661 -223188193 - L1MC5 LINE L1 -469 7492 7376 2255 105 0 20 chr2 27499661 27499967 -223187887 - AluSx SINE Alu -12 300 1 350 242 184 81 chr2 27499967 27500058 -223187796 - L1MC5 LINE L1 -585 7376 7247 416 204 90 95 chr2 27500135 27500250 -223187604 - L1MC5 LINE L1 -737 7224 7109 2065 97 3 20 chr2 27500250 27500550 -223187304 + AluSx SINE Alu 3 297 -15 416 204 90 95 chr2 27500550 27500645 -223187209 - L1MC5 LINE L1 -852 7109 7015 243 88 0 0 chr2 27500660 27500694 -223187160 + (T)n Simple_repeat Simple_repeat 1 34 0 10856 32 9 106 chr2 27500725 27502259 -223185595 - SVA Other Other 0 1386 1 182 261 22 0 chr2 27502392 27502438 -223185416 - L2 LINE L2 -577 2737 2691 1210 192 81 37 chr2 27502440 27502736 -223185118 + AluJb SINE Alu 1 308 0 524 286 29 55 chr2 27502788 27503061 -223184793 + L1MC4a LINE L1 5589 5854 -1954 787 193 0 0 chr2 27503062 27503197 -223184657 + AluJo SINE Alu 2 136 -176 2428 72 7 0 chr2 27503197 27503502 -223184352 + AluSg SINE Alu 1 307 -3 822 114 0 18 chr2 27503502 27503616 -223184238 - AluJo/FLAM SINE Alu -200 112 1 195 42 0 0 chr2 27504506 27504530 -223183324 + (CGGGGG)n Simple_repeat Simple_repeat 4 27 0 423 118 15 15 chr2 27505566 27505634 -223182220 - FLAM_A SINE Alu -64 68 1 1826 146 36 7 chr2 27505926 27506228 -223181626 - AluSx SINE Alu -1 311 1 2030 97 3 31 chr2 27506498 27506788 -223181066 + AluSg SINE Alu 12 293 -17 391 289 0 11 chr2 27506914 27507004 -223180850 + L2 LINE L2 3225 3313 0 2373 106 0 0 chr2 27507315 27507617 -223180237 - AluSx SINE Alu -10 302 1 327 153 0 42 chr2 27507923 27507995 -223179859 - AluJo SINE Alu -166 136 68 1778 159 33 10 chr2 27508043 27508345 -223179509 - AluJo SINE Alu -3 309 1 2043 132 3 3 chr2 27508356 27508645 -223179209 - AluSg SINE Alu -21 289 1 447 270 50 117 chr2 27508720 27508891 -223178963 - L1MEd LINE L1 -4910 1209 1028 1756 131 0 117 chr2 27508891 27509243 -223178611 - AluJo SINE Alu -1 311 1 447 270 50 117 chr2 27509243 27509523 -223178331 - L1MEd LINE L1 -5091 1028 817 1765 153 14 14 chr2 27509523 27509804 -223178050 - AluJo SINE Alu -31 281 1 447 270 50 117 chr2 27509804 27510044 -223177810 - L1MEd LINE L1 -5302 817 563 2452 89 0 19 chr2 27511314 27511630 -223176224 + AluSg SINE Alu 1 310 0 3686 78 99 5 chr2 27511638 27512206 -223175648 + L1MA2 LINE L1 5328 5948 -356 2456 84 6 6 chr2 27512206 27512517 -223175337 + AluY SINE Alu 1 311 0 638 317 93 45 chr2 27512519 27512750 -223175104 + L1MEc LINE L1 1464 1719 -4677 2249 127 3 0 chr2 27512750 27513057 -223174797 + AluSx SINE Alu 1 308 -4 638 317 93 45 chr2 27513057 27513178 -223174676 + L1MEc LINE L1 1719 1833 -4563 2231 115 7 0 chr2 27513188 27513484 -223174370 + AluSx SINE Alu 1 298 -14 975 185 10 36 chr2 27513724 27513978 -223173876 + AluJo SINE Alu 123 371 0 2209 95 3 30 chr2 27515387 27515692 -223172162 + AluSx SINE Alu 2 298 -14 2335 94 3 10 chr2 27516724 27517033 -223170821 + AluSx SINE Alu 1 307 -5 1871 165 13 0 chr2 27517150 27517453 -223170401 + AluSx SINE Alu 1 307 -5 521 311 52 52 chr2 27517563 27517811 -223170043 + MIR SINE MIR 4 251 -11 1141 300 109 20 chr2 27517829 27518417 -223169437 + L2 LINE L2 2451 3140 -173 1405 59 99 63 chr2 27518417 27518639 -223169215 + MER30 DNA MER1_type 1 230 0 1141 300 109 20 chr2 27518639 27518830 -223169024 + L2 LINE L2 3140 3313 0 601 147 161 14 chr2 27519660 27519733 -223168121 - MER69A DNA AcHobo -2350 176 115 2106 112 3 7 chr2 27519733 27520027 -223167827 + AluSx SINE Alu 1 293 -19 601 147 161 14 chr2 27520027 27520096 -223167758 - MER69A DNA AcHobo -2411 115 13 8455 54 2 0 chr2 27521119 27522086 -223165768 - LTR5 LTR ERVK 0 969 1 2040 133 3 20 chr2 27524472 27524773 -223163081 - AluJb SINE Alu -16 296 1 2355 115 0 0 chr2 27524994 27525298 -223162556 - AluSx SINE Alu -8 304 1 2392 83 3 0 chr2 27525840 27526129 -223161725 - AluSc SINE Alu -19 290 1 2455 72 0 10 chr2 27526327 27526633 -223161221 - AluY SINE Alu -7 304 2 1393 210 80 70 chr2 27529199 27529216 -223158638 - MLT2B1 LTR ERVL -30 490 475 1303 197 41 90 chr2 27529216 27529582 -223158272 + MER7A DNA MER2_type 1 346 0 1393 210 80 70 chr2 27529582 27530049 -223157805 - MLT2B1 LTR ERVL -45 475 1 234 150 0 0 chr2 27530049 27530089 -223157765 + (TA)n Simple_repeat Simple_repeat 1 40 0 25 0 0 0 chr2 27530089 27530114 -223157740 + AT_rich Low_complexity Low_complexity 1 25 0 2289 73 0 11 chr2 27530251 27530575 -223157279 - AluY SINE Alu 0 321 1 849 107 43 130 chr2 27531002 27531167 -223156687 - Charlie5 DNA MER1_type 0 2585 2448 2173 128 0 3 chr2 27531167 27531465 -223156389 + AluSx SINE Alu 3 299 -13 849 107 43 130 chr2 27531465 27531552 -223156302 - Charlie5 DNA MER1_type -137 2448 2355 2497 80 0 10 chr2 27533658 27533972 -223153882 + AluY SINE Alu 1 311 0 196 244 0 0 chr2 27534871 27534912 -223152942 - L3b LINE CR1 -9 1574 1534 1974 115 0 77 chr2 27534918 27535058 -223152796 + AluSx SINE Alu 5 107 -205 2992 13 0 0 chr2 27535058 27535376 -223152478 + AluYb8 SINE Alu 1 318 0 1974 115 0 77 chr2 27535376 27535558 -223152296 + AluSx SINE Alu 107 302 -10 2367 98 0 3 chr2 27537110 27537406 -223150448 + AluSx SINE Alu 3 297 -15 2350 77 13 3 chr2 27538161 27538460 -223149394 - AluSx SINE Alu -10 302 1 202 259 0 0 chr2 27539487 27539541 -223148313 + (CGGGG)n Simple_repeat Simple_repeat 2 55 0 2197 124 16 0 chr2 27541743 27542050 -223145804 + AluSx SINE Alu 1 312 0 215 286 0 48 chr2 27542335 27542398 -223145456 + L2 LINE L2 3191 3250 -22 2543 57 7 0 chr2 27542546 27542845 -223145009 - AluY SINE Alu -10 301 1 2002 159 3 0 chr2 27543068 27543363 -223144491 - AluJb SINE Alu -6 306 11 2242 94 31 0 chr2 27543858 27544146 -223143708 - AluSx SINE Alu -15 297 1 2456 59 3 10 chr2 27544156 27544461 -223143393 - AluY SINE Alu -8 303 1 210 211 14 42 chr2 27544878 27544949 -223142905 + C-rich Low_complexity Low_complexity 3 71 0 2409 108 3 0 chr2 27548871 27549176 -223138678 + AluSx SINE Alu 1 306 -6 2664 202 125 45 chr2 27549199 27549868 -223137986 - L1MC4 LINE L1 -194 7848 7091 2203 125 10 0 chr2 27549868 27550172 -223137682 + AluSx SINE Alu 3 309 -3 2664 202 125 45 chr2 27550172 27550374 -223137480 - L1MC4 LINE L1 -951 7091 6907 322 246 110 8 chr2 27550408 27550526 -223137328 - L1MC4 LINE L1 -1877 5931 5802 351 0 0 0 chr2 27550527 27550566 -223137288 + (TG)n Simple_repeat Simple_repeat 2 40 0 946 232 30 38 chr2 27550617 27550884 -223136970 - L1MC4 LINE L1 -1164 6878 6614 210 204 0 20 chr2 27550884 27550933 -223136921 + (TA)n Simple_repeat Simple_repeat 2 49 0 1619 231 115 11 chr2 27551006 27551564 -223136290 - L1MC4a LINE L1 -1764 6044 5429 2219 115 7 0 chr2 27551564 27551893 -223135961 - AluSx SINE Alu 0 312 1 1668 167 14 14 chr2 27551893 27552181 -223135673 - AluJb SINE Alu -12 300 13 488 308 37 41 chr2 27552181 27552363 -223135491 - L1MC4a LINE L1 -1055 5091 4910 189 0 0 0 chr2 27552363 27552384 -223135470 + (TA)n Simple_repeat Simple_repeat 2 22 0 1866 152 0 42 chr2 27552384 27552694 -223135160 - AluJo SINE Alu -15 297 1 488 308 37 41 chr2 27552694 27552899 -223134955 - L1MC4a LINE L1 -1235 4911 4703 2329 118 0 13 chr2 27552899 27553213 -223134641 - AluSx SINE Alu -2 310 1 488 308 37 41 chr2 27553213 27553287 -223134567 - L1MC4a LINE L1 -1443 4703 4630 1947 102 0 4 chr2 27553632 27553886 -223133968 - AluSc SINE Alu -12 297 45 2163 101 24 43 chr2 27553886 27554262 -223133592 - THE1C LTR MaLR -6 369 1 362 298 57 32 chr2 27554497 27554655 -223133199 + MIR SINE MIR 36 197 -65 2072 142 0 0 chr2 27554668 27554964 -223132890 - AluSx SINE Alu -16 296 1 237 301 71 35 chr2 27554964 27555077 -223132777 - L2 LINE L2 -10 3303 3187 262 213 0 0 chr2 27555210 27555257 -223132597 - MER94 DNA DNA -16 118 72 1075 274 120 58 chr2 27555752 27555922 -223131932 - MLT1K LTR MaLR -2 586 428 2159 121 3 3 chr2 27555922 27556220 -223131634 - AluSx SINE Alu -14 298 1 1075 274 120 58 chr2 27556220 27556599 -223131255 - MLT1K LTR MaLR -160 428 3 627 172 144 58 chr2 27556607 27556781 -223131073 - MER53 DNA DNA 0 189 1 186 296 107 58 chr2 27556906 27557112 -223130742 - L2 LINE L2 -221 3051 2836 858 130 147 6 chr2 27557167 27557344 -223130510 + Charlie5 DNA MER1_type 1 202 -2410 1958 134 10 26 chr2 27557371 27557684 -223130170 + AluSx SINE Alu 1 308 -4 471 146 85 61 chr2 27557812 27557977 -223129877 + Charlie5 DNA MER1_type 2367 2535 -77 579 120 0 0 chr2 27557978 27558053 -223129801 + AluS SINE Alu 2 76 -235 2244 98 0 36 chr2 27558069 27558376 -223129478 - AluSx SINE Alu -16 296 1 409 101 81 111 chr2 27558376 27558445 -223129409 + Charlie5 DNA MER1_type 2490 2557 -28 2039 143 3 19 chr2 27558445 27558759 -223129095 - AluJo SINE Alu -3 309 1 409 101 81 111 chr2 27558759 27558788 -223129066 + Charlie5 DNA MER1_type 2557 2585 0 268 273 0 0 chr2 27559349 27559415 -223128439 - L2 LINE L2 -6 3307 3242 2299 95 3 13 chr2 27559628 27559934 -223127920 - AluSx SINE Alu -9 303 1 694 171 0 0 chr2 27562372 27562483 -223125371 + FLAM_A SINE Alu 28 138 -4 279 0 0 0 chr2 27562537 27562568 -223125286 + (CA)n Simple_repeat Simple_repeat 2 32 0 1801 174 3 10 chr2 27562673 27562972 -223124882 - AluJo SINE Alu -15 297 1 645 181 6 30 chr2 27563305 27563471 -223124383 + L1MC3 LINE L1 6797 6958 -827 1023 159 6 23 chr2 27563473 27563649 -223124205 + AluJb SINE Alu 136 308 -4 3007 183 39 41 chr2 27563669 27564490 -223123364 + L1MD3 LINE L1 6990 7995 0 1080 149 0 0 chr2 27564497 27564672 -223123182 + L1MA2 LINE L1 4048 4222 -1924 * 2989 121 10 10 chr2 27564660 27564672 -223123182 + L1MA2 LINE L1 4432 4443 -1703 2090 103 0 67 chr2 27564672 27564984 -223122870 - AluSg SINE Alu -16 294 4 2989 121 10 10 chr2 27564984 27565474 -223122380 + L1MA2 LINE L1 4442 4934 -1212 1732 149 129 18 chr2 27565474 27565847 -223122007 + MSTA LTR MaLR 1 414 -14 4524 114 70 40 chr2 27565847 27566153 -223121701 + L1MA2 LINE L1 4949 5244 -1060 204 40 0 0 chr2 27566153 27566178 -223121676 + (TA)n Simple_repeat Simple_repeat 2 26 0 4524 114 70 40 chr2 27566178 27566245 -223121609 + L1MA2 LINE L1 5244 5308 -996 2430 92 0 19 chr2 27566245 27566561 -223121293 + AluSg SINE Alu 1 310 0 4524 114 70 40 chr2 27566561 27567136 -223120718 + L1MA2 LINE L1 5308 5957 -347 2087 118 7 0 chr2 27567136 27567438 -223120416 + AluSx SINE Alu 1 304 0 4524 114 70 40 chr2 27567438 27567558 -223120296 + L1MA2 LINE L1 5957 6072 -232 1401 169 4 13 chr2 27567561 27567798 -223120056 + AluJb SINE Alu 5 239 -73 523 214 132 0 chr2 27568065 27568224 -223119630 + L1ME LINE L1 5461 5640 -524 2267 128 0 0 chr2 27568327 27568624 -223119230 + AluSx SINE Alu 1 297 -15 2158 123 0 41 chr2 27568802 27569118 -223118736 + AluSx SINE Alu 1 303 -9 286 283 22 11 chr2 27569248 27569340 -223118514 + CT-rich Low_complexity Low_complexity 3 95 0 30 0 0 0 chr2 27569747 27569777 -223118077 + AT_rich Low_complexity Low_complexity 1 30 0 1995 104 61 11 chr2 27569777 27570056 -223117798 + AluSg SINE Alu 1 293 -17 277 349 0 0 chr2 27572555 27572681 -223115173 + GA-rich Low_complexity Low_complexity 2 127 0 218 198 108 81 chr2 27573450 27573479 -223114375 - MIR SINE MIR -65 143 116 2429 77 0 46 chr2 27573479 27573806 -223114048 + AluSq SINE Alu 2 313 0 218 198 108 81 chr2 27573806 27573887 -223113967 - MIR SINE MIR -92 116 30 25 105 0 0 chr2 27575898 27575993 -223111861 + GC_rich Low_complexity Low_complexity 1 95 0 1972 97 0 0 chr2 27581164 27581411 -223106443 + AluY SINE Alu 1 247 -64 2321 95 3 0 chr2 27582939 27583233 -223104621 + AluSq SINE Alu 1 295 -18 304 245 61 150 chr2 27584337 27584434 -223103420 - MIR3 SINE MIR -11 197 116 2207 73 11 0 chr2 27584434 27584706 -223103148 + AluSq SINE Alu 16 290 -23 304 245 61 150 chr2 27584706 27584755 -223103099 - MIR3 SINE MIR -92 116 64 404 73 0 0 chr2 27585427 27585482 -223102372 - L1M LINE L1 -934 5378 5324 2258 109 3 16 chr2 27585489 27585802 -223102052 - AluSq SINE Alu -4 309 1 564 59 0 0 chr2 27585802 27585870 -223101984 - AluSp SINE Alu -168 145 78 1380 154 0 9 chr2 27585870 27586084 -223101770 - AluSx SINE Alu -100 212 1 856 121 63 35 chr2 27586084 27586258 -223101596 - L1 LINE L1 -842 5304 5126 228 185 108 31 chr2 27586340 27586405 -223101449 + L1MB8 LINE L1 6065 6134 -44 992 171 6 12 chr2 27586407 27586571 -223101283 - FRAM SINE Alu 0 166 4 284 292 44 51 chr2 27586851 27586988 -223100866 - MER5A DNA MER1_type -29 160 25 2044 133 10 0 chr2 27587303 27587612 -223100242 - AluSx SINE Alu 0 312 1 212 0 36 0 chr2 27587613 27587641 -223100213 + (TTG)n Simple_repeat Simple_repeat 1 29 0 1293 99 0 0 chr2 27587641 27587803 -223100051 - AluSg/x SINE Alu -31 279 118 596 161 207 42 chr2 27587836 27588029 -223099825 + MLT1D LTR MaLR 103 327 -178 2288 112 0 3 chr2 27588029 27588325 -223099529 + AluSx SINE Alu 1 295 -17 1555 150 28 12 chr2 27594980 27595233 -223092621 - AluJo SINE Alu -55 257 1 21 36 0 0 chr2 27595235 27595263 -223092591 + AT_rich Low_complexity Low_complexity 1 28 0 670 200 109 17 chr2 27595279 27595371 -223092483 + AluJo SINE Alu 13 95 -217 414 0 0 0 chr2 27595371 27595417 -223092437 + (CA)n Simple_repeat Simple_repeat 2 47 0 670 200 109 17 chr2 27595417 27595499 -223092355 + AluJo SINE Alu 95 203 -109 213 39 0 0 chr2 27595507 27595533 -223092321 + (CA)n Simple_repeat Simple_repeat 1 26 0 1086 157 0 3 chr2 27595533 27595568 -223092286 + AluJb SINE Alu 33 67 -245 198 0 0 0 chr2 27595568 27595590 -223092264 + (CA)n Simple_repeat Simple_repeat 2 23 0 1086 157 0 3 chr2 27595590 27595746 -223092108 + AluJb SINE Alu 67 293 -19 2474 74 0 0 chr2 27595952 27596250 -223091604 + AluY SINE Alu 1 298 -13 2309 90 0 32 chr2 27596263 27596573 -223091281 + AluSp SINE Alu 2 301 -12 190 260 80 0 chr2 27597457 27597507 -223090347 - L2 LINE L2 -14 3258 3205 1914 159 14 0 chr2 27597531 27597814 -223090040 + AluJb SINE Alu 1 287 -25 482 271 40 34 chr2 27597832 27597922 -223089932 - MIR SINE MIR -6 256 168 1992 121 64 0 chr2 27597922 27598204 -223089650 + AluSx SINE Alu 1 300 -12 482 271 40 34 chr2 27598204 27598290 -223089564 - MIR SINE MIR -94 168 79 558 218 0 24 chr2 27598317 27598441 -223089413 - MIR SINE MIR -139 123 3 899 110 103 0 chr2 27598767 27598912 -223088942 + MSTA LTR MaLR 268 427 -1 1956 116 7 3 chr2 27649048 27649351 -223038503 + AluSx SINE Alu 5 308 -4 25 51 0 0 chr2 27649871 27649910 -223037944 + GC_rich Low_complexity Low_complexity 1 39 0 860 273 71 33 chr2 27650458 27650657 -223037197 - L1MC/D LINE L1 -2160 5648 5458 1821 142 10 3 chr2 27650657 27650953 -223036901 + AluJo SINE Alu 1 298 -14 860 273 71 33 chr2 27650953 27651120 -223036734 - L1MC/D LINE L1 -2350 5458 5268 1495 189 43 0 chr2 27651131 27651411 -223036443 - AluJo SINE Alu -20 292 1 247 219 16 0 chr2 27651815 27651879 -223035975 + L1ME LINE L1 5713 5777 -344 1331 139 33 0 chr2 27651881 27652096 -223035758 + AluSc SINE Alu 1 222 -87 185 83 28 0 chr2 27652108 27652144 -223035710 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 306 0 0 0 chr2 27652158 27652192 -223035662 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1740 171 0 10 chr2 27653789 27654094 -223033760 - AluJo SINE Alu -10 302 1 346 281 110 48 chr2 27654141 27654465 -223033389 - L1MC/D LINE L1 -1360 4786 4431 23 0 0 0 chr2 27654523 27654546 -223033308 + AT_rich Low_complexity Low_complexity 1 23 0 1360 171 0 0 chr2 27654563 27654797 -223033057 - AluSx SINE Alu -22 290 57 282 221 26 26 chr2 27655368 27655445 -223032409 - L2 LINE L2 -1 3271 3195 440 231 97 22 chr2 27655486 27655620 -223032234 - MIR SINE MIR -82 180 37 260 298 137 23 chr2 27656876 27657007 -223030847 - L2 LINE L2 -8 3305 3160 181 239 0 60 chr2 27657165 27657232 -223030622 + L2 LINE L2 1696 1758 -1556 2014 104 0 4 chr2 27657381 27657659 -223030195 + AluSg SINE Alu 1 277 -33 473 147 53 11 chr2 27657762 27657857 -223029997 - AluSg/x SINE Alu -6 306 208 404 212 0 62 chr2 27657916 27658095 -223029759 + C-rich Low_complexity Low_complexity 3 170 0 912 174 99 36 chr2 27658289 27658542 -223029312 - AluJo SINE Alu -43 269 1 333 47 0 0 chr2 27660293 27660336 -223027518 + (CA)n Simple_repeat Simple_repeat 1 43 0 189 321 67 61 chr2 27660407 27660445 -223027409 - L2 LINE L2 -22 3250 3214 228 67 0 0 chr2 27660445 27660475 -223027379 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 189 321 67 61 chr2 27660475 27660601 -223027253 - L2 LINE L2 -58 3214 3085 193 319 32 64 chr2 27660947 27661041 -223026813 - MIR3 SINE MIR -17 191 101 2004 105 3 10 chr2 27661123 27661418 -223026436 + AluSq SINE Alu 1 293 -20 25 51 0 0 chr2 27661454 27661493 -223026361 + AT_rich Low_complexity Low_complexity 1 39 0 1289 103 5 26 chr2 27662227 27662421 -223025433 + AluY SINE Alu 101 290 -21 24 0 0 0 chr2 27662421 27662445 -223025409 + AT_rich Low_complexity Low_complexity 1 24 0 2161 111 10 0 chr2 27662464 27662770 -223025084 - AluSg SINE Alu -1 309 1 712 282 75 34 chr2 27662921 27663279 -223024575 - HAL1 LINE L1 -440 2067 1695 1721 243 115 69 chr2 27663339 27664431 -223023423 - HAL1 LINE L1 -749 1758 616 3090 198 72 37 chr2 27664664 27664927 -223022927 - L1MC4 LINE L1 0 8042 7790 1571 147 11 39 chr2 27664927 27665212 -223022642 - AluJo SINE Alu -14 298 22 3090 198 72 37 chr2 27665212 27665792 -223022062 - L1MC4 LINE L1 -252 7790 7169 831 193 30 24 chr2 27665796 27665962 -223021892 - FRAM SINE Alu -9 167 1 644 296 53 14 chr2 27666213 27666429 -223021425 - MIR SINE MIR -21 241 16 548 300 78 33 chr2 27666998 27667178 -223020676 - MIR3 SINE MIR -4 204 17 433 243 176 91 chr2 27667224 27667520 -223020334 + MER102b DNA MER1_type 21 341 0 424 281 100 20 chr2 27668019 27668268 -223019586 - L2 LINE L2 -798 2516 2248 238 317 37 0 chr2 27669231 27669313 -223018541 - L2 LINE L2 -601 2713 2629 236 287 17 26 chr2 27669427 27669542 -223018312 + L1MC/D LINE L1 5772 5885 -2157 252 283 33 11 chr2 27669879 27669971 -223017883 + L1ME LINE L1 110 203 -5867 1268 268 62 49 chr2 27670332 27670918 -223016936 + L1ME LINE L1 391 989 -5081 2118 72 3 78 chr2 27670918 27671251 -223016603 + AluSg SINE Alu 3 310 0 1268 268 62 49 chr2 27671251 27671354 -223016500 + L1ME LINE L1 989 1089 -4981 4029 110 19 19 chr2 27671375 27672040 -223015814 + SVA Other Other 13 677 -709 892 83 38 0 chr2 27672145 27672277 -223015577 - AluSq/x SINE Alu -175 137 1 187 277 62 15 chr2 27672619 27672684 -223015170 + MIR SINE MIR 79 146 -116 1660 116 33 0 chr2 27672684 27672957 -223014897 - AluSx SINE Alu 0 315 35 222 91 0 0 chr2 27674024 27674057 -223013797 + (TG)n Simple_repeat Simple_repeat 2 34 0 245 208 228 30 chr2 27674754 27674855 -223012999 - L2 LINE L2 -2 3270 3150 580 256 8 0 chr2 27675060 27675185 -223012669 - MIR3 SINE MIR -48 160 35 203 356 13 13 chr2 27675716 27675865 -223011989 + C-rich Low_complexity Low_complexity 1 149 0 647 265 41 20 chr2 27676372 27676568 -223011286 - MIR SINE MIR -51 211 12 381 278 80 20 chr2 27677079 27677230 -223010624 - MIR SINE MIR 0 262 103 287 158 123 0 chr2 27677525 27677582 -223010272 - L1ME LINE L1 -456 5665 5602 1778 102 37 0 chr2 27677633 27677879 -223009975 - AluSx SINE Alu -46 266 12 667 252 105 58 chr2 27677892 27678253 -223009601 + L1ME4a LINE L1 5549 5926 -195 2107 108 10 0 chr2 27678324 27678629 -223009225 - AluSx SINE Alu -4 308 1 1084 218 36 45 chr2 27678725 27678869 -223008985 + L1MA4 LINE L1 5991 6135 -165 1592 133 23 77 chr2 27678869 27678998 -223008856 + AluSx SINE Alu 1 135 -172 2232 72 7 7 chr2 27678998 27679303 -223008551 + AluY SINE Alu 1 305 -6 1592 133 23 77 chr2 27679303 27679496 -223008358 + AluSx SINE Alu 135 307 0 1084 218 36 45 chr2 27679496 27679658 -223008196 + L1MA4 LINE L1 6135 6295 -5 1410 196 19 11 chr2 27679731 27679997 -223007857 - REP3 LTR ERV -294 268 1 314 214 21 100 chr2 27679999 27680043 -223007811 + HAL1 LINE L1 2303 2349 -158 1418 186 3 20 chr2 27680043 27680367 -223007487 + AluJb SINE Alu 1 319 0 314 214 21 100 chr2 27680367 27680459 -223007395 + HAL1 LINE L1 2349 2431 -76 * 379 153 0 0 chr2 27680449 27680508 -223007346 - L1M2 LINE L1 -535 5756 5698 * 725 236 75 80 chr2 27680502 27681001 -223006853 - L1MC5 LINE L1 -869 6939 6414 477 128 37 28 chr2 27681215 27681324 -223006530 + Alu SINE Alu 2 111 -200 242 299 153 28 chr2 27682033 27682177 -223005677 - MIR3 SINE MIR -32 176 15 261 283 160 0 chr2 27683500 27683606 -223004248 + L2 LINE L2 3142 3264 -8 232 270 54 40 chr2 27683637 27683711 -223004143 - L2 LINE L2 -13 3259 3185 472 299 148 27 chr2 27684564 27684895 -223002959 - L2 LINE L2 -3 3310 2940 2234 97 7 0 chr2 27685285 27685584 -223002270 - AluSx SINE Alu -11 301 1 340 170 19 0 chr2 27685700 27685753 -223002101 - Alu SINE Alu -246 55 2 1654 199 62 51 chr2 27685758 27686331 -223001523 - L1ME LINE L1 -483 5683 5069 2219 92 7 0 chr2 27686335 27686638 -223001216 - AluSx SINE Alu -7 305 1 1556 229 66 18 chr2 27686643 27687036 -223000818 - MLT1E2 LTR MaLR 0 626 215 639 183 14 21 chr2 27687038 27687180 -223000674 - MLT2C1 LTR ERVL -256 141 1 690 214 0 0 chr2 27687182 27687327 -223000527 - L1ME LINE L1 -1072 5074 4930 2094 125 0 0 chr2 27687349 27687645 -223000209 - AluSq SINE Alu -17 296 1 2205 107 0 3 chr2 27688806 27689116 -222998738 + AluSc SINE Alu 1 309 0 1717 125 3 56 chr2 27689427 27689565 -222998289 + AluSg SINE Alu 1 116 -194 1961 135 3 0 chr2 27689565 27689862 -222997992 + AluSq SINE Alu 1 298 -15 1717 125 3 56 chr2 27689862 27690026 -222997828 + AluSg SINE Alu 116 287 -23 189 0 0 0 chr2 27690035 27690056 -222997798 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1817 122 16 7 chr2 27690062 27690365 -222997489 + AluY SINE Alu 2 307 -4 1531 161 6 54 chr2 27690667 27690983 -222996871 - AluJb SINE Alu -11 301 1 754 218 18 12 chr2 27691865 27692030 -222995824 - MIR3 SINE MIR -7 201 36 199 0 0 0 chr2 27692696 27692718 -222995136 + (TTTG)n Simple_repeat Simple_repeat 2 108 0 2304 57 0 0 chr2 27692718 27693000 -222994854 - AluY SINE Alu -1 303 1 660 220 16 81 chr2 27694035 27694221 -222993633 - MIR3 SINE MIR -16 192 19 429 194 313 15 chr2 27694327 27694461 -222993393 - MER5A DNA MER1_type -12 177 4 508 307 56 6 chr2 27694474 27694653 -222993201 + MIR SINE MIR 29 216 -46 876 320 52 41 chr2 27694802 27695243 -222992611 - L2 LINE L2 -1 3271 2826 993 55 0 0 chr2 27695259 27695386 -222992468 + AluY SINE Alu 171 297 -14 2140 108 3 7 chr2 27696515 27696820 -222991034 + AluSx SINE Alu 1 304 -8 670 237 0 7 chr2 27697468 27697620 -222990234 - MIR SINE MIR -1 261 111 756 132 0 39 chr2 27697621 27697750 -222990104 - AluSg/x SINE Alu 0 309 186 1665 130 4 0 chr2 27697789 27698092 -222989762 + AluSc SINE Alu 25 328 0 313 287 11 11 chr2 27698094 27698181 -222989673 - MIR SINE MIR -161 101 15 1703 171 0 16 chr2 27698304 27698609 -222989245 + AluJo SINE Alu 1 300 -12 2074 133 3 0 chr2 27698618 27698927 -222988927 - AluSx SINE Alu -2 310 1 2062 121 0 3 chr2 27699975 27700272 -222987582 + AluSx SINE Alu 1 296 -16 2271 99 0 3 chr2 27701208 27701522 -222986332 + AluSq SINE Alu 1 313 0 2270 100 0 3 chr2 27701874 27702183 -222985671 + AluSx SINE Alu 5 312 0 330 233 133 11 chr2 27703274 27703364 -222984490 - L2 LINE L2 -1 3312 3212 1941 111 10 39 chr2 27703365 27703502 -222984352 + AluSc SINE Alu 1 140 -169 2185 95 3 0 chr2 27703502 27703798 -222984056 + AluSp SINE Alu 9 305 -8 1941 111 10 39 chr2 27703798 27703966 -222983888 + AluSc SINE Alu 140 297 -12 648 211 88 14 chr2 27704077 27704138 -222983716 - MER5A DNA MER1_type -3 186 131 1845 140 7 7 chr2 27704138 27704431 -222983423 + AluJo SINE Alu 1 293 -19 648 211 88 14 chr2 27704431 27704516 -222983338 - MER5A DNA MER1_type -58 131 29 1985 128 0 0 chr2 27704536 27704832 -222983022 - AluSx SINE Alu -16 296 1 360 196 38 15 chr2 27704853 27704935 -222982919 + MER5A DNA MER1_type 18 105 -80 326 276 0 58 chr2 27705861 27705948 -222981906 - L2 LINE L2 -7 3306 3225 1882 152 3 10 chr2 27705948 27706251 -222981603 - AluSx SINE Alu -10 302 2 306 306 27 54 chr2 27706495 27706606 -222981248 + MLT1K LTR MaLR 141 248 -340 26 50 0 0 chr2 27706630 27706670 -222981184 + AT_rich Low_complexity Low_complexity 1 40 0 28 61 0 0 chr2 27706795 27706844 -222981010 + AT_rich Low_complexity Low_complexity 1 49 0 598 321 62 22 chr2 27706879 27707277 -222980577 - L1MC4a LINE L1 -370 5987 5726 245 280 0 13 chr2 27707523 27707598 -222980256 + MLT1K LTR MaLR 500 573 -15 192 200 0 0 chr2 27707944 27707989 -222979865 + A-rich Low_complexity Low_complexity 1 45 0 194 289 66 86 chr2 27708345 27708497 -222979357 - MIR SINE MIR -33 229 81 492 233 0 0 chr2 27708893 27708979 -222978875 + L2 LINE L2 3223 3308 -5 283 234 47 111 chr2 27709475 27709631 -222978223 + MIR3 SINE MIR 51 192 -54 1967 126 3 0 chr2 27709638 27709953 -222977901 + AluSx SINE Alu 1 312 0 2141 130 0 0 chr2 27709955 27710263 -222977591 + AluSx SINE Alu 1 308 -4 888 150 21 42 chr2 27710828 27711021 -222976833 + MER53 DNA DNA 1 189 0 276 333 30 22 chr2 27711663 27711798 -222976056 + L2 LINE L2 2652 2787 -527 1758 155 0 7 chr2 27712745 27713042 -222974812 - AluSx SINE Alu -17 295 1 2151 96 10 0 chr2 27713141 27713444 -222974410 - AluSp SINE Alu -7 306 1 2624 198 112 105 chr2 27713446 27713720 -222974134 - L1MC4a LINE L1 -753 5629 5359 548 155 0 21 chr2 27713720 27713817 -222974037 + AluSg/x SINE Alu 212 306 -3 2624 198 112 105 chr2 27713817 27714656 -222973198 - L1MC4a LINE L1 -1023 5359 4411 4463 233 66 16 chr2 27714679 27716120 -222971734 - L1M4c LINE L1 -2599 3783 2303 614 152 124 35 chr2 27716135 27716280 -222971574 - AluJo SINE Alu -18 294 137 591 259 161 0 chr2 27716284 27716489 -222971365 - L1M4c LINE L1 -4598 1965 1728 1011 189 0 0 chr2 27716490 27716670 -222971184 - AluJo SINE Alu -1 311 132 23 0 0 29 chr2 27716672 27716687 -222971167 + AT_rich Low_complexity Low_complexity 1 15 -18 1365 74 16 0 chr2 27716687 27716877 -222970977 - L1MA1 LINE L1 0 6302 6110 23 0 0 29 chr2 27716877 27716895 -222970959 + AT_rich Low_complexity Low_complexity 15 33 0 2068 86 18 0 chr2 27716895 27717173 -222970681 - AluSc SINE Alu -26 283 1 798 117 36 0 chr2 27717180 27717291 -222970563 - AluJo SINE Alu -185 127 13 327 217 48 12 chr2 27717320 27717403 -222970451 - L1M4c LINE L1 -4706 1676 1591 1632 172 3 7 chr2 27717464 27717754 -222970100 - AluJb SINE Alu -23 289 1 1996 113 3 14 chr2 27717785 27718078 -222969776 - AluSx SINE Alu -22 290 1 2323 86 3 3 chr2 27718135 27718448 -222969406 - AluSp SINE Alu 0 313 1 1520 174 71 3 chr2 27718542 27718659 -222969195 + AluJb SINE Alu 1 109 -203 459 0 0 0 chr2 27718659 27718710 -222969144 + (CA)n Simple_repeat Simple_repeat 2 52 0 1520 174 71 3 chr2 27718710 27718874 -222968980 + AluJb SINE Alu 109 301 -11 1028 197 19 9 chr2 27718882 27719095 -222968759 + AluJo SINE Alu 83 297 -15 433 225 48 12 chr2 27719095 27719256 -222968598 - L1M4c LINE L1 -4851 1531 1273 2615 118 83 59 chr2 27719258 27719800 -222968054 - SVA Other Other -263 1123 569 2012 109 10 13 chr2 27719938 27720249 -222967605 + AluSq SINE Alu 1 310 -3 2368 82 7 0 chr2 27720258 27720563 -222967291 + AluSc SINE Alu 1 307 -2 1487 173 43 22 chr2 27720755 27721032 -222966822 + REP3 LTR ERV 263 545 -17 1510 277 153 35 chr2 27721098 27721926 -222965928 - HAL1 LINE L1 -300 2207 1243 521 64 13 0 chr2 27721926 27722004 -222965850 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 1510 277 153 35 chr2 27722004 27722162 -222965692 - HAL1 LINE L1 -1264 1243 1105 1010 177 0 0 chr2 27722168 27722332 -222965522 - FRAM SINE Alu -12 164 1 736 226 39 87 chr2 27722336 27722646 -222965208 - HAL1 LINE L1 -1423 1084 790 325 213 37 29 chr2 27723025 27723161 -222964693 + G-rich Low_complexity Low_complexity 5 141 0 1463 173 19 0 chr2 27723226 27723486 -222964368 - L1MA7 LINE L1 -69 6222 5958 439 227 98 0 chr2 27725170 27725333 -222962521 + L1ME4a LINE L1 5930 6108 -13 2106 110 0 3 chr2 27725334 27725624 -222962230 + AluSc SINE Alu 1 289 -20 186 71 0 0 chr2 27725686 27725714 -222962140 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1456 157 52 35 chr2 27725716 27726003 -222961851 - AluJo SINE Alu -20 292 1 721 302 43 21 chr2 27726024 27726259 -222961595 - MIR SINE MIR 0 262 23 2494 67 0 0 chr2 27726338 27726650 -222961204 + AluSq SINE Alu 1 312 -1 988 182 0 0 chr2 27726650 27726820 -222961034 + AluSg/x SINE Alu 133 302 -8 467 204 0 82 chr2 27726828 27726852 -222961002 - L1MC4 LINE L1 -5 8037 8013 2933 65 16 5 chr2 27726852 27727223 -222960631 - THE1C LTR MaLR 0 375 1 467 204 0 82 chr2 27727223 27727345 -222960509 - L1MC4 LINE L1 -29 8013 7903 189 0 0 0 chr2 27727351 27727372 -222960482 + (TTA)n Simple_repeat Simple_repeat 3 23 0 361 170 7 92 chr2 27727373 27727468 -222960386 - L1ME1 LINE L1 -54 6112 6010 1794 134 39 16 chr2 27727468 27727773 -222960081 + AluJo SINE Alu 1 312 0 361 170 7 92 chr2 27727773 27728255 -222959599 - L1ME1 LINE L1 -156 6010 5587 1257 176 178 33 chr2 27728260 27728619 -222959235 - L1MC4 LINE L1 -131 7911 7501 231 36 0 0 chr2 27729945 27729973 -222957881 + (TAA)n Simple_repeat Simple_repeat 2 29 0 693 282 75 25 chr2 27729974 27730215 -222957639 - MIR SINE MIR -8 254 2 2028 158 47 30 chr2 27730227 27730633 -222957221 - L1MC1 LINE L1 -5 6328 5916 1619 178 3 10 chr2 27730643 27730936 -222956918 - AluJo SINE Alu -21 291 1 1824 162 7 0 chr2 27731077 27731380 -222956474 + AluJb SINE Alu 1 305 -7 365 262 90 33 chr2 27732524 27732646 -222955208 + MIR SINE MIR 106 234 -28 2112 121 26 9 chr2 27732732 27733071 -222954783 - L1MC1 LINE L1 0 6333 5989 221 256 158 65 chr2 27733114 27733360 -222954494 + L2 LINE L2 3034 3302 -11 337 282 51 54 chr2 27734132 27734198 -222953656 - MIR3 SINE MIR -57 151 86 2004 132 10 0 chr2 27734198 27734502 -222953352 + AluSx SINE Alu 3 309 -3 337 282 51 54 chr2 27734502 27734611 -222953243 - MIR3 SINE MIR -122 86 6 211 183 17 52 chr2 27735003 27735118 -222952736 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 1832 86 10 66 chr2 27735140 27735195 -222952659 - L1PB2 LINE L1 -1 6150 6093 798 135 16 24 chr2 27735195 27735321 -222952533 - FLAM_C SINE Alu -5 128 4 1832 86 10 66 chr2 27735321 27735569 -222952285 - L1PB2 LINE L1 -58 6093 5864 341 223 45 0 chr2 27735580 27735692 -222952162 - MER113 DNA MER1_type? -400 121 5 238 299 72 28 chr2 27735726 27735845 -222952009 + MIR SINE MIR 38 163 -66 2020 105 7 7 chr2 27736542 27736837 -222951017 - AluSx SINE Alu -17 295 1 226 250 0 0 chr2 27736946 27736994 -222950860 - L2 LINE L2 0 3313 3266 299 319 72 18 chr2 27737888 27738054 -222949800 + MIR3 SINE MIR 12 186 -22 637 319 73 18 chr2 27738316 27738645 -222949209 + L2 LINE L2 2897 3243 -70 364 268 27 27 chr2 27738705 27738817 -222949037 - MIR SINE MIR -56 206 95 882 174 0 0 chr2 27746425 27746569 -222941285 + MER3 DNA MER1_type 1 144 -65 1228 169 40 0 chr2 27746615 27746816 -222941038 + MER3 DNA MER1_type 1 209 0 385 328 195 22 chr2 27747107 27747692 -222940162 - L2 LINE L2 0 3272 2596 215 269 51 13 chr2 27747908 27747986 -222939868 - L2 LINE L2 -1036 2278 2198 225 324 65 53 chr2 27748043 27748213 -222939641 + MER5B DNA MER1_type 1 172 -6 1499 171 22 4 chr2 27748883 27749190 -222938664 - AluSx SINE Alu 0 315 4 207 264 81 11 chr2 27749420 27749507 -222938347 - MIR SINE MIR -169 93 1 279 247 71 0 chr2 27750402 27750487 -222937367 + MIR SINE MIR 162 252 -10 1121 119 6 62 chr2 27750607 27750783 -222937071 - AluSp SINE Alu -147 166 1 542 306 110 5 chr2 27751790 27751999 -222935855 + MIR SINE MIR 13 243 -19 288 263 86 91 chr2 27752544 27752776 -222935078 + MIR SINE MIR 2 232 -30 2024 87 13 33 chr2 27753112 27753269 -222934585 - AluSx SINE Alu -19 293 143 2167 99 7 7 chr2 27753269 27753572 -222934282 - AluSp SINE Alu -5 308 6 2024 87 13 33 chr2 27753572 27753713 -222934141 - AluSx SINE Alu -169 143 1 30 27 0 0 chr2 27755166 27755203 -222932651 + AT_rich Low_complexity Low_complexity 1 37 0 1754 150 16 33 chr2 27755220 27755527 -222932327 - AluJo SINE Alu -10 302 1 210 37 0 0 chr2 27755528 27755555 -222932299 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 2247 101 0 0 chr2 27755569 27755856 -222931998 - AluSx SINE Alu -25 287 1 1029 220 24 65 chr2 27755946 27756128 -222931726 - L1ME1 LINE L1 -5 6161 6059 1846 169 10 0 chr2 27756128 27756424 -222931430 + AluJo SINE Alu 1 299 -13 1029 220 24 65 chr2 27756424 27756568 -222931286 - L1ME1 LINE L1 -107 6059 5911 348 310 54 0 chr2 27757530 27757659 -222930195 - L2 LINE L2 0 3272 3137 258 304 7 34 chr2 27757687 27757835 -222930019 - L1M4 LINE L1 -3655 2491 2348 891 179 43 16 chr2 27757837 27758021 -222929833 + L1MC4a LINE L1 5744 5932 -1876 2426 91 0 3 chr2 27758078 27758387 -222929467 + AluY SINE Alu 1 308 -3 1792 137 37 7 chr2 27758423 27758723 -222929131 + L1MA9 LINE L1 5994 6302 -10 21 71 0 0 chr2 27758754 27758796 -222929058 + AT_rich Low_complexity Low_complexity 1 42 0 1699 126 4 0 chr2 27758934 27759188 -222928666 - AluY SINE Alu -16 295 41 374 213 197 27 chr2 27760429 27760612 -222927242 - HAL1b LINE L1 0 1348 1135 1043 148 6 0 chr2 27760624 27760786 -222927068 - AluJb SINE Alu -16 296 134 2072 139 3 3 chr2 27760786 27761089 -222926765 - AluSx SINE Alu -9 303 1 933 235 68 9 chr2 27761103 27761324 -222926530 - L1MB7 LINE L1 0 6184 5951 * 1141 198 8 32 chr2 27761297 27761550 -222926304 - L1MB7 LINE L1 -611 5567 5321 1049 153 11 11 chr2 27761618 27761795 -222926059 - L1MB8 LINE L1 -6 6172 5996 212 194 0 0 chr2 27762593 27762629 -222925225 + T-rich Low_complexity Low_complexity 1 36 0 1434 159 8 16 chr2 27762867 27763118 -222924736 + AluJo SINE Alu 21 269 -43 1836 154 7 3 chr2 27763245 27763538 -222924316 + AluJb SINE Alu 1 294 -18 1838 123 74 0 chr2 27763785 27764083 -222923771 - AluSx SINE Alu 0 318 1 754 177 8 0 chr2 27764165 27764289 -222923565 - FLAM_C SINE Alu -7 126 2 578 93 10 31 chr2 27764289 27764315 -222923539 + L1MA9 LINE L1 6209 6234 -78 2009 144 84 72 chr2 27764315 27764744 -222923110 - Tigger2a DNA MER2_type 0 434 1 578 93 10 31 chr2 27764744 27764814 -222923040 + L1MA9 LINE L1 6234 6303 -9 421 39 0 0 chr2 27764873 27764925 -222922929 - L1MA9 LINE L1 0 6312 6261 252 225 0 79 chr2 27764933 27764995 -222922859 + MIR SINE MIR 175 230 -32 1274 170 83 0 chr2 27764995 27765213 -222922641 + MER46A DNA MER2_type 1 236 0 252 225 0 79 chr2 27765213 27765239 -222922615 + MIR SINE MIR 230 256 -6 1530 189 6 26 chr2 27766820 27767132 -222920722 - AluJo SINE Alu -6 306 1 992 211 21 5 chr2 27767656 27767850 -222920004 - MER58A DNA MER1_type 0 224 28 285 188 71 59 chr2 27767852 27767937 -222919917 + MIR SINE MIR 167 252 -10 1598 183 3 20 chr2 27768906 27769206 -222918648 - AluJb SINE Alu -17 295 1 2146 97 47 7 chr2 27769872 27770172 -222917682 - AluSp SINE Alu -1 312 1 26 0 0 27 chr2 27770248 27770266 -222917588 + AT_rich Low_complexity Low_complexity 1 18 -18 354 98 0 0 chr2 27770266 27770317 -222917537 + (CA)n Simple_repeat Simple_repeat 2 52 0 26 0 0 27 chr2 27770317 27770335 -222917519 + AT_rich Low_complexity Low_complexity 18 36 0 38 0 0 0 chr2 27770481 27770519 -222917335 + AT_rich Low_complexity Low_complexity 1 38 0 2722 179 88 64 chr2 27770530 27771204 -222916650 - L1MC4 LINE L1 -14 8028 7331 2172 96 17 17 chr2 27771204 27771506 -222916348 + AluSx SINE Alu 1 302 -10 2722 179 88 64 chr2 27771506 27771628 -222916226 - L1MC4 LINE L1 -711 7331 7213 444 279 61 47 chr2 27771657 27772016 -222915838 - L1M4 LINE L1 -905 5241 4878 486 165 124 0 chr2 27772031 27772128 -222915726 - FLAM_A SINE Alu -6 136 28 2228 110 0 0 chr2 27772774 27773065 -222914789 - AluSx SINE Alu -21 291 1 380 217 30 74 chr2 27773073 27773276 -222914578 - L1M4 LINE L1 -1719 4427 4234 1472 204 14 0 chr2 27774960 27775249 -222912605 + AluJo SINE Alu 2 294 -18 1842 114 8 8 chr2 27775367 27775631 -222912223 - AluSq SINE Alu -23 290 27 1729 132 45 0 chr2 27775731 27775996 -222911858 - AluSx SINE Alu -18 294 18 266 246 127 17 chr2 27776145 27776263 -222911591 - L1MC4a LINE L1 -1737 6071 5941 * 470 128 216 0 chr2 27776257 27776359 -222911495 - L1MD3 LINE L1 0 7995 7872 6450 187 70 73 chr2 27776365 27776838 -222911016 - L1MC4a LINE L1 -220 7588 7115 2047 105 42 0 chr2 27776838 27777124 -222910730 - AluSg SINE Alu -12 298 1 6450 187 70 73 chr2 27777124 27778354 -222909500 - L1MC4a LINE L1 -693 7115 5883 2192 98 3 3 chr2 27778354 27778639 -222909215 + AluSc SINE Alu 1 285 -24 6450 187 70 73 chr2 27778639 27778662 -222909192 - L1MC4a LINE L1 -1925 5883 5861 1376 208 13 0 chr2 27778662 27778898 -222908956 + MER8 DNA MER2_type 1 239 0 6450 187 70 73 chr2 27778898 27778995 -222908859 - L1MC4a LINE L1 -1947 5861 5768 23 0 0 0 chr2 27779062 27779085 -222908769 + AT_rich Low_complexity Low_complexity 1 23 0 1264 35 0 0 chr2 27779690 27779832 -222908022 + AluY SINE Alu 158 299 -12 24 0 0 0 chr2 27779943 27779967 -222907887 + AT_rich Low_complexity Low_complexity 1 24 0 184 243 0 0 chr2 27780419 27780456 -222907398 - L2 LINE L2 0 3313 3277 1169 272 142 36 chr2 27780458 27780951 -222906903 - MLT1H1 LTR MaLR 0 555 11 940 150 39 0 chr2 27782905 27783058 -222904796 + FRAM SINE Alu 4 162 -14 1864 112 108 0 chr2 27783087 27783356 -222904498 - AluSx SINE Alu -14 298 1 901 240 115 6 chr2 27783521 27783844 -222904010 + L1MC4 LINE L1 7693 8041 -1 2250 74 32 0 chr2 27784264 27784547 -222903307 + AluSx SINE Alu 1 292 -20 1322 230 80 40 chr2 27784770 27785177 -222902677 - L1MC5 LINE L1 -30 7931 7497 1192 165 104 17 chr2 27785177 27785474 -222902380 - MER33 DNA MER1_type 0 324 2 1322 230 80 40 chr2 27785474 27785593 -222902261 - L1MC5 LINE L1 -464 7497 7384 368 86 35 0 chr2 27785646 27785704 -222902150 - MER31A LTR ERV1 -73 412 353 233 165 77 132 chr2 27785715 27785806 -222902048 - L1MC5 LINE L1 -602 7359 7274 508 262 44 1 chr2 27785817 27785949 -222901905 - MIR SINE MIR -55 153 9 610 275 47 19 chr2 27788690 27788901 -222898953 + L1ME LINE L1 5523 5739 -431 653 263 111 31 chr2 27789017 27789306 -222898548 + MLT1J2 LTR MaLR 110 421 -29 290 145 101 14 chr2 27789325 27789394 -222898460 + L1ME LINE L1 5743 5817 -345 1703 184 7 13 chr2 27789440 27789739 -222898115 + AluJb SINE Alu 1 297 -15 613 290 158 55 chr2 27789764 27790273 -222897581 + L2 LINE L2 2446 3051 -262 31 0 0 0 chr2 27791222 27791253 -222896601 + AT_rich Low_complexity Low_complexity 1 31 0 1188 142 5 87 chr2 27791834 27792053 -222895801 + AluSg/x SINE Alu 89 289 -21 270 204 0 0 chr2 27792054 27792103 -222895751 + MER5B DNA MER1_type 126 174 -4 1516 149 29 18 chr2 27793971 27794117 -222893737 - AluSx SINE Alu -28 284 132 2039 86 13 57 chr2 27794117 27794431 -222893423 - AluY SINE Alu -11 300 1 1516 149 29 18 chr2 27794431 27794565 -222893289 - AluSx SINE Alu -180 132 1 364 271 51 132 chr2 27794690 27794963 -222892891 - L2 LINE L2 0 3313 3063 239 286 0 18 chr2 27795002 27795058 -222892796 - MIR SINE MIR -133 75 21 875 55 0 0 chr2 27795350 27795459 -222892395 - AluSx SINE Alu -1 311 203 940 117 0 0 chr2 27795459 27795587 -222892267 - AluSx SINE Alu -173 140 13 281 309 0 36 chr2 27795787 27795871 -222891983 + MIR SINE MIR 20 100 -162 217 263 79 0 chr2 27795900 27795976 -222891878 - L2 LINE L2 -32 3281 3200 310 257 0 66 chr2 27796636 27796819 -222891035 + A-rich Low_complexity Low_complexity 2 172 0 372 307 24 18 chr2 27797800 27797966 -222889888 + L3b LINE CR1 1223 1389 -194 27 0 0 0 chr2 27798234 27798261 -222889593 + AT_rich Low_complexity Low_complexity 1 27 0 818 188 43 81 chr2 27798284 27798518 -222889336 - AluJo SINE Alu -86 226 2 189 0 0 0 chr2 27798564 27798585 -222889269 + (T)n Simple_repeat Simple_repeat 1 21 0 223 330 124 0 chr2 27799296 27799393 -222888461 + MER5B DNA MER1_type 2 110 -68 249 57 0 0 chr2 27799631 27799666 -222888188 + (TG)n Simple_repeat Simple_repeat 1 35 0 2236 104 7 0 chr2 27799746 27800045 -222887809 - AluSp SINE Alu -12 301 1 21 0 0 0 chr2 27800904 27800925 -222886929 + AT_rich Low_complexity Low_complexity 1 21 0 930 176 43 16 chr2 27801524 27801712 -222886142 - L1ME LINE L1 -347 5819 5627 587 155 176 7 chr2 27803039 27803181 -222884673 + MER5A DNA MER1_type 2 167 -22 310 287 157 0 chr2 27803478 27803593 -222884261 + L2 LINE L2 3139 3271 -1 2166 96 10 14 chr2 27803685 27804001 -222883853 + AluSx SINE Alu 1 312 0 2299 78 7 7 chr2 27806391 27806685 -222881169 - AluY SINE Alu -17 294 1 354 237 0 26 chr2 27806859 27806935 -222880919 - 7SK RNA RNA -94 99 26 1353 186 119 7 chr2 27807722 27807991 -222879863 + AluJb SINE Alu 1 299 -13 680 164 0 0 chr2 27808260 27808364 -222879490 - FLAM_A SINE Alu -7 135 32 1806 167 3 23 chr2 27808452 27808758 -222879096 - AluJo SINE Alu -12 300 1 288 223 248 16 chr2 27808777 27808898 -222878956 + L2 LINE L2 3160 3308 -5 309 258 202 48 chr2 27810088 27810212 -222877642 - MIR SINE MIR -99 163 21 1006 183 163 133 chr2 27811171 27811771 -222876083 + L1MC4 LINE L1 7425 8042 0 624 218 160 0 chr2 27811862 27812018 -222875836 - MER5A DNA MER1_type 0 189 9 1863 154 31 7 chr2 27812050 27812343 -222875511 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 27812476 27812499 -222875355 + AT_rich Low_complexity Low_complexity 1 23 0 353 250 60 10 chr2 27812504 27812604 -222875250 + L2 LINE L2 3190 3294 -19 391 265 78 36 chr2 27812606 27812772 -222875082 + MIR SINE MIR 20 192 -70 297 215 56 47 chr2 27813811 27813918 -222873936 + L2 LINE L2 2610 2717 -597 184 381 58 7 chr2 27814227 27814366 -222873488 + L2 LINE L2 2866 3011 -261 598 219 214 14 chr2 27814551 27814596 -222873258 - MIR SINE MIR -3 259 224 1797 146 7 23 chr2 27814596 27814904 -222872950 - AluJo SINE Alu -9 303 1 598 219 214 14 chr2 27814904 27815073 -222872781 - MIR SINE MIR -38 224 2 327 242 16 65 chr2 27815148 27815334 -222872520 + C-rich Low_complexity Low_complexity 2 178 0 1653 125 49 28 chr2 27816930 27817218 -222870636 + AluJo SINE Alu 1 294 -18 189 261 0 0 chr2 27817591 27817637 -222870217 - MIR SINE MIR -65 143 98 24 0 0 0 chr2 27817673 27817697 -222870157 + AT_rich Low_complexity Low_complexity 1 24 0 30 45 0 0 chr2 27817727 27817771 -222870083 + AT_rich Low_complexity Low_complexity 1 44 0 1571 145 152 7 chr2 27818148 27818431 -222869423 + MER33 DNA MER1_type 1 324 0 1062 97 0 0 chr2 27818451 27818585 -222869269 - AluSg SINE Alu -176 134 1 24 32 0 0 chr2 27819182 27819213 -222868641 + AT_rich Low_complexity Low_complexity 1 31 0 223 150 33 0 chr2 27819250 27819310 -222868544 + (TA)n Simple_repeat Simple_repeat 2 63 0 2372 54 10 7 chr2 27819567 27819863 -222867991 - AluY SINE Alu -14 297 1 1774 169 0 0 chr2 27819871 27820155 -222867699 - AluJb SINE Alu -20 292 9 1956 122 7 14 chr2 27821117 27821270 -222866584 - AluSx SINE Alu -25 287 135 2417 88 3 0 chr2 27821270 27821576 -222866278 - AluSp SINE Alu -6 307 1 1956 122 7 14 chr2 27821576 27821710 -222866144 - AluSx SINE Alu -177 135 2 1030 157 6 34 chr2 27822074 27822252 -222865602 - AluJo SINE Alu -52 260 88 384 40 0 0 chr2 27822560 27822610 -222865244 + (TG)n Simple_repeat Simple_repeat 1 50 0 338 379 17 17 chr2 27822642 27822816 -222865038 - MLT1K LTR MaLR -210 378 205 512 225 99 0 chr2 27822970 27823081 -222864773 - L1MC/D LINE L1 -2151 5657 5536 31 76 0 0 chr2 27823128 27823194 -222864660 + AT_rich Low_complexity Low_complexity 1 66 0 1984 97 30 4 chr2 27823283 27823550 -222864304 - AluSq SINE Alu -15 298 25 1737 165 47 6 chr2 27823639 27823961 -222863893 - L1MB3 LINE L1 -7 6176 5842 31 76 0 0 chr2 27824291 27824357 -222863497 + AT_rich Low_complexity Low_complexity 1 66 0 232 313 47 0 chr2 27824454 27824518 -222863336 - L3 LINE CR1 -964 613 547 406 299 125 0 chr2 27824734 27824918 -222862936 + L1MC/D LINE L1 5451 5657 -2151 2139 120 0 26 chr2 27825109 27825417 -222862437 + AluSx SINE Alu 1 300 -12 2223 116 0 0 chr2 27825428 27825722 -222862132 + AluSc SINE Alu 1 294 -15 243 301 41 0 chr2 27825942 27826015 -222861839 - L2 LINE L2 -9 3304 3229 406 315 9 0 chr2 27826061 27826169 -222861685 - MIR3 SINE MIR -21 187 79 2322 97 3 0 chr2 27827675 27827975 -222859879 - AluSc SINE Alu -8 301 1 368 239 138 16 chr2 27828219 27828380 -222859474 - MIR SINE MIR -67 141 16 1464 167 158 40 chr2 27828484 27828832 -222859022 - MLT1B LTR MaLR -1 389 1 1658 108 19 19 chr2 27828889 27829147 -222858707 - AluSg SINE Alu -10 300 43 2141 111 3 7 chr2 27829779 27830077 -222857777 + AluSx SINE Alu 3 299 -13 243 188 0 0 chr2 27830735 27830783 -222857071 + GA-rich Low_complexity Low_complexity 2 49 0 267 319 86 17 chr2 27831326 27831442 -222856412 + L2 LINE L2 3146 3269 -3 342 227 76 15 chr2 27831513 27831645 -222856209 - L1ME4a LINE L1 -6 6115 5976 1958 124 13 29 chr2 27832115 27832422 -222855432 + AluSx SINE Alu 1 302 -10 500 220 0 25 chr2 27832484 27832602 -222855252 - AluJ SINE Alu 0 312 198 809 136 0 17 chr2 27832614 27832732 -222855122 - AluJ SINE Alu -194 118 3 660 264 50 50 chr2 27832765 27832931 -222854923 - L1ME4a LINE L1 -266 5855 5687 1753 166 0 27 chr2 27832931 27833226 -222854628 + AluJo SINE Alu 1 287 -25 660 264 50 50 chr2 27833226 27833339 -222854515 - L1ME4a LINE L1 -433 5688 5576 344 260 72 28 chr2 27834604 27834740 -222853114 - L1MC4a LINE L1 -1795 6013 5866 216 0 0 0 chr2 27834740 27834764 -222853090 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 344 260 72 28 chr2 27834764 27834808 -222853046 - L1MC4a LINE L1 -1942 5866 5825 357 207 47 38 chr2 27834825 27834931 -222852923 - L1MC4a LINE L1 -409 5753 5668 3161 175 22 2 chr2 27834954 27835498 -222852356 - MER68 LTR ERV1 0 562 8 293 246 14 0 chr2 27835519 27835588 -222852266 - L1MC4a LINE L1 -2226 5582 5513 2243 118 16 3 chr2 27835794 27836100 -222851754 - L1PB3 LINE L1 -12 6142 5833 1473 167 4 16 chr2 27836101 27836359 -222851495 - AluJo SINE Alu -1 311 57 6460 176 21 150 chr2 27836359 27837216 -222850638 - L1 LINE L1 -2204 3942 2976 2021 143 10 3 chr2 27837216 27837516 -222850338 - AluSx SINE Alu -10 302 1 6460 176 21 150 chr2 27837516 27837592 -222850262 - L1 LINE L1 -3170 2976 2892 189 0 0 0 chr2 27837592 27837613 -222850241 + (TC)n Simple_repeat Simple_repeat 2 22 0 850 153 0 0 chr2 27837621 27837739 -222850115 - FLAM_C SINE Alu -25 118 1 6460 176 21 150 chr2 27837739 27838698 -222849156 - L1 LINE L1 -3261 2885 2254 2098 112 18 0 chr2 27838698 27839002 -222848852 - AluSx SINE Alu 0 309 1 6460 176 21 150 chr2 27839002 27839420 -222848434 - L1 LINE L1 -3892 2254 1784 629 202 71 60 chr2 27839607 27839874 -222847980 + L1MC5 LINE L1 7509 7778 -183 383 217 94 83 chr2 27839987 27840148 -222847706 - L1MC/D LINE L1 -478 5643 5497 1648 144 0 34 chr2 27840749 27841039 -222846815 - AluJo SINE Alu 0 309 29 1717 134 29 76 chr2 27841044 27841358 -222846496 - AluJb SINE Alu -11 301 3 328 303 23 68 chr2 27842494 27842626 -222845228 + MIR SINE MIR 81 206 -56 248 170 21 0 chr2 27842684 27842731 -222845123 + MIR3 SINE MIR 113 160 -48 427 190 25 165 chr2 27842731 27842871 -222844983 - MER5B DNA MER1_type 0 178 73 1696 188 7 3 chr2 27842871 27843163 -222844691 - AluJb SINE Alu -17 295 3 427 190 25 165 chr2 27843163 27843222 -222844632 - MER5B DNA MER1_type -105 73 7 876 210 97 0 chr2 27843247 27843442 -222844412 - MER58A DNA MER1_type -10 214 1 688 277 167 53 chr2 27843753 27843814 -222844040 - L2 LINE L2 -543 2771 2718 2402 72 7 0 chr2 27843814 27844106 -222843748 - AluSg SINE Alu -16 294 1 688 277 167 53 chr2 27844106 27844517 -222843337 - L2 LINE L2 -596 2718 2245 23 0 0 0 chr2 28045300 28045323 -222642531 + AT_rich Low_complexity Low_complexity 1 23 0 4921 125 11 28 chr2 28046179 28047314 -222640540 - L1P4 LINE L1 -392 5776 4623 2159 129 0 0 chr2 28047314 28047632 -222640222 - AluSx SINE Alu 0 318 1 1484 204 39 0 chr2 28047635 28047795 -222640059 - AluJb SINE Alu -22 290 113 282 87 0 0 chr2 28047795 28047841 -222640013 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 1484 204 39 0 chr2 28047841 28047959 -222639895 - AluJb SINE Alu -199 113 1 4921 125 11 28 chr2 28047959 28048214 -222639640 - L1P4 LINE L1 -1547 4621 4402 1231 212 0 4 chr2 28048604 28048859 -222638995 - AluJb SINE Alu -54 258 5 1707 140 22 14 chr2 28048925 28049203 -222638651 - AluJo SINE Alu -21 291 12 396 165 10 41 chr2 28049419 28049516 -222638338 - MLT1F LTR MaLR -61 481 388 37 0 0 0 chr2 28049708 28049745 -222638109 + AT_rich Low_complexity Low_complexity 1 37 0 252 237 92 13 chr2 28049778 28049854 -222638000 - L2 LINE L2 -10 3303 3222 1019 238 70 8 chr2 28050807 28051051 -222636803 - MIR SINE MIR 0 262 4 365 273 30 0 chr2 28051998 28052097 -222635757 - L2 LINE L2 -2 3270 3169 202 308 112 37 chr2 28053019 28053126 -222634728 - L2 LINE L2 0 3313 3199 2173 116 0 0 chr2 28053208 28053502 -222634352 + AluSc SINE Alu 1 294 -15 2398 86 0 0 chr2 28053769 28054061 -222633793 + AluSg SINE Alu 1 292 -18 2164 170 14 2 chr2 28054312 28054735 -222633119 + L1 LINE L1 4812 5239 -907 2013 123 3 7 chr2 28055254 28055547 -222632307 - AluSx SINE Alu -20 292 1 222 241 19 0 chr2 28056233 28056287 -222631567 + L2 LINE L2 2550 2604 -710 955 268 69 119 chr2 28056886 28057597 -222630257 + L2 LINE L2 2591 3276 -37 1730 104 25 0 chr2 28057670 28057949 -222629905 - L1MA5A LINE L1 -4 6293 6008 2225 127 0 10 chr2 28058695 28058872 -222628982 - AluSx SINE Alu -1 311 137 2226 95 0 13 chr2 28058872 28059176 -222628678 - AluSc SINE Alu -9 300 1 2225 127 0 10 chr2 28059176 28059312 -222628542 - AluSx SINE Alu -175 137 1 793 120 33 13 chr2 28059448 28059598 -222628256 + L1M2 LINE L1 5318 5470 -830 340 194 28 14 chr2 28059598 28059670 -222628184 - MER2 DNA MER2_type 0 345 273 990 86 39 0 chr2 28059672 28059800 -222628054 + AluSg SINE Alu 1 133 -177 728 113 48 0 chr2 28059812 28059936 -222627918 - MER2 DNA MER2_type -86 259 130 3846 130 4 83 chr2 28059936 28060137 -222627717 - Tigger1 DNA MER2_type 0 2418 2203 6031 32 0 0 chr2 28060137 28060847 -222627007 - L1PA3 LINE L1 -1 6154 5445 3846 130 4 83 chr2 28060847 28060878 -222626976 - Tigger1 DNA MER2_type -215 2203 2171 2194 136 0 3 chr2 28060878 28061187 -222626667 + AluSx SINE Alu 1 308 -4 3846 130 4 83 chr2 28061187 28061740 -222626114 - Tigger1 DNA MER2_type -247 2171 1694 * 6577 132 64 55 chr2 28061717 28063070 -222624784 - Tigger1 DNA MER2_type -1053 1365 1 532 191 200 0 chr2 28063070 28063179 -222624675 - MER2 DNA MER2_type -214 131 1 798 142 39 0 chr2 28063201 28063328 -222624526 + FLAM_A SINE Alu 2 133 0 1792 99 17 0 chr2 28063335 28063568 -222624286 + AluSc SINE Alu 1 237 -72 281 169 17 0 chr2 28063568 28063627 -222624227 + (TA)n Simple_repeat Simple_repeat 2 61 0 348 304 51 88 chr2 28064929 28065146 -222622708 + HAL1 LINE L1 1684 1892 -615 253 286 94 21 chr2 28065522 28065714 -222622140 + HAL1 LINE L1 2165 2370 -137 21 57 0 0 chr2 28065848 28065883 -222621971 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 28065915 28065937 -222621917 + AT_rich Low_complexity Low_complexity 1 22 0 2394 103 5 46 chr2 28066348 28066765 -222621089 + L1PA13 LINE L1 5759 6158 -5 388 91 0 0 chr2 28066766 28066821 -222621033 + MSTB2 LTR MaLR 403 457 0 2535 60 0 0 chr2 28066856 28067157 -222620697 - AluY SINE Alu -10 301 1 189 220 20 40 chr2 28067258 28067308 -222620546 - MIR SINE MIR -105 157 109 898 141 0 22 chr2 28067384 28067519 -222620335 - FLAM_C SINE Alu -1 132 1 1731 152 20 10 chr2 28067909 28068206 -222619648 - AluJb SINE Alu -12 300 1 1265 259 211 15 chr2 28068589 28069531 -222618323 + L2 LINE L2 2176 3311 -2 879 123 8 0 chr2 28070251 28070381 -222617473 + FLAM_C SINE Alu 1 131 -2 27 0 0 0 chr2 28070384 28070411 -222617443 + AT_rich Low_complexity Low_complexity 1 27 0 353 242 109 32 chr2 28070476 28070607 -222617247 + MIR SINE MIR 70 208 0 2028 183 57 28 chr2 28070654 28071124 -222616730 + MLT1D LTR MaLR 22 505 0 305 279 38 0 chr2 28071508 28071587 -222616267 + MIR3 SINE MIR 109 190 -18 2141 113 3 0 chr2 28071777 28072085 -222615769 - AluSq SINE Alu 0 309 1 672 196 243 0 chr2 28072364 28072537 -222615317 + MER58C DNA MER1_type 1 215 0 229 132 0 0 chr2 28073139 28073177 -222614677 + L1ME4a LINE L1 6080 6117 -4 285 119 0 0 chr2 28073503 28073545 -222614309 - MIR SINE MIR -66 196 155 1555 261 76 9 chr2 28076131 28076778 -222611076 + L1M4 LINE L1 3851 4540 -1606 1742 161 4 7 chr2 28076784 28077058 -222610796 + AluJb SINE Alu 1 273 -39 2243 124 54 94 chr2 28077193 28077691 -222610163 + L1MB3 LINE L1 5706 6183 0 410 250 49 24 chr2 28077683 28077847 -222610007 + L1M4 LINE L1 4699 4866 -1280 * 248 175 18 0 chr2 28077848 28077905 -222609949 + Charlie7 DNA MER1_type 2165 2222 -390 25 75 0 0 chr2 28077980 28078033 -222609821 + AT_rich Low_complexity Low_complexity 1 53 0 2014 153 33 19 chr2 28078071 28078431 -222609423 + MLT1A1 LTR MaLR 1 365 0 2225 97 10 3 chr2 28078458 28078757 -222609097 + AluSc SINE Alu 1 301 -8 203 361 135 0 chr2 28078948 28079081 -222608773 - L2 LINE L2 -167 3105 2955 207 282 11 55 chr2 28079830 28080011 -222607843 + GA-rich Low_complexity Low_complexity 4 176 0 598 229 33 33 chr2 28080289 28080442 -222607412 + MIR SINE MIR 89 241 -21 284 262 114 13 chr2 28080991 28081140 -222606714 + MER112 DNA MER1_type 78 241 -19 873 319 150 12 chr2 28081175 28081683 -222606171 + L3 LINE CR1 997 1574 -3 970 158 124 13 chr2 28082432 28082666 -222605188 + MER5C DNA MER1_type 3 262 -62 1157 168 92 27 chr2 28083646 28083908 -222603946 - LTR35 LTR ERV1 -339 279 1 241 273 7 58 chr2 28084235 28084374 -222603480 + CT-rich Low_complexity Low_complexity 4 135 0 1468 214 36 78 chr2 28084458 28084545 -222603309 + L1ME3A LINE L1 5659 5748 -422 2714 93 11 11 chr2 28084545 28084920 -222602934 - THE1C LTR MaLR 0 375 1 1468 214 36 78 chr2 28084920 28085361 -222602493 + L1ME3A LINE L1 5748 6165 -5 288 281 141 47 chr2 28085542 28085670 -222602184 - L2 LINE L2 -38 3234 3095 256 310 0 0 chr2 28085721 28085779 -222602075 + MIR SINE MIR 79 136 -72 1360 155 32 79 chr2 28086214 28086441 -222601413 + L1MB3 LINE L1 5160 5353 -827 1927 157 0 7 chr2 28086441 28086741 -222601113 + AluJo SINE Alu 15 312 0 1360 155 32 79 chr2 28086741 28086958 -222600896 + L1MB3 LINE L1 5353 5579 -601 2144 111 0 88 chr2 28086963 28087200 -222600654 + L1PA16 LINE L1 5804 5995 -171 1509 164 20 37 chr2 28087200 28087498 -222600356 + AluJb SINE Alu 1 293 -19 2144 111 0 88 chr2 28087498 28087648 -222600206 + L1PA16 LINE L1 5995 6157 -9 2994 135 49 14 chr2 28087667 28088258 -222599596 + L1MB3 LINE L1 5571 6182 -1 22 56 0 0 chr2 28088308 28088344 -222599510 + AT_rich Low_complexity Low_complexity 1 36 0 245 250 32 16 chr2 28088830 28088954 -222598900 + (CGCGG)n Simple_repeat Simple_repeat 2 127 0 184 278 206 41 chr2 28090310 28090407 -222597447 + MIR SINE MIR 30 142 -66 194 308 64 0 chr2 28090820 28090898 -222596956 + MIR SINE MIR 129 211 -51 285 250 14 14 chr2 28091734 28091806 -222596048 - L2 LINE L2 0 3313 3242 2462 82 0 0 chr2 28091897 28092200 -222595654 + AluSc SINE Alu 1 303 -6 3006 202 61 18 chr2 28093392 28094225 -222593629 - L1MC4a LINE L1 -126 7682 6814 232 258 15 30 chr2 28095580 28095646 -222592208 - L2 LINE L2 -1 3312 3248 256 330 62 0 chr2 28096605 28096702 -222591152 + MIR3 SINE MIR 82 184 -24 2211 165 46 0 chr2 28096715 28097146 -222590708 + L1MB7 LINE L1 5734 6184 0 891 150 0 0 chr2 28097166 28097299 -222590555 + FLAM_A SINE Alu 1 133 0 2050 97 31 3 chr2 28097660 28097950 -222589904 - AluSq SINE Alu -15 298 1 2628 52 0 0 chr2 28098945 28099251 -222588603 + AluY SINE Alu 1 306 -5 303 119 0 0 chr2 28099887 28099929 -222587925 + 5S rRNA rRNA 1 42 -79 420 284 59 35 chr2 28100068 28100322 -222587532 - L1ME2 LINE L1 -212 5952 5693 695 204 136 9 chr2 28100369 28100589 -222587265 - MER112 DNA MER1_type -10 250 3 529 289 132 5 chr2 28100595 28100792 -222587062 - L1ME2 LINE L1 -2159 5649 5428 670 297 118 38 chr2 28100798 28101069 -222586785 - L1ME2 LINE L1 -755 5391 5143 264 100 0 0 chr2 28101069 28101109 -222586745 + (TG)n Simple_repeat Simple_repeat 1 40 0 240 35 0 0 chr2 28101108 28101137 -222586717 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 670 297 118 38 chr2 28101109 28101524 -222586330 - L1ME2 LINE L1 -1003 5143 4680 225 321 83 9 chr2 28101640 28101749 -222586105 - L2 LINE L2 -198 3115 2999 3890 143 35 50 chr2 28101754 28102494 -222585360 - MER44D DNA MER2_type -3 602 2 755 271 123 22 chr2 28102596 28102913 -222584941 + HAL1 LINE L1 679 1027 -1480 610 233 48 0 chr2 28102927 28103073 -222584781 + HAL1 LINE L1 1587 1739 -768 258 292 15 0 chr2 28103091 28103156 -222584698 + HAL1 LINE L1 1814 1879 -628 647 304 64 5 chr2 28103495 28103715 -222584139 + MIR SINE MIR 2 234 -28 472 315 18 0 chr2 28103914 28104079 -222583775 + MARNA DNA Mariner 62 229 -357 1742 163 10 16 chr2 28104301 28104607 -222583247 + AluJb SINE Alu 1 304 -8 275 254 99 18 chr2 28105779 28105991 -222581863 - MER102b DNA MER1_type 0 341 46 5700 151 77 2 chr2 28106326 28107347 -222580507 - L1P LINE L1 -1752 4394 3297 1400 206 57 34 chr2 28107347 28107696 -222580158 - MSTD LTR MaLR -39 357 1 324 353 158 16 chr2 28107696 28107886 -222579968 - L2 LINE L2 -97 3175 2959 191 344 33 22 chr2 28108018 28108108 -222579746 - L2 LINE L2 -504 2810 2720 7191 29 1 1 chr2 28108113 28108964 -222578890 + L1PA3 LINE L1 5305 6155 0 274 360 17 67 chr2 28109775 28109953 -222577901 - MIR3 SINE MIR -6 202 34 1643 151 33 3 chr2 28110163 28110462 -222577392 - L1MB3 LINE L1 -19 6164 5857 342 212 257 0 chr2 28110470 28110583 -222577271 + L1MEc LINE L1 1116 1257 -5139 * 2146 127 65 3 chr2 28110578 28110933 -222576921 - L1MB3 LINE L1 -245 5938 5562 642 263 126 52 chr2 28111214 28111408 -222576446 - L1MB3 LINE L1 -297 5824 5646 1752 185 0 16 chr2 28111408 28111721 -222576133 - AluJb SINE Alu -4 308 1 642 263 126 52 chr2 28111721 28111979 -222575875 - L1MB3 LINE L1 -475 5646 5313 311 301 18 44 chr2 28112147 28112260 -222575594 + MER5B DNA MER1_type 63 172 -6 192 290 230 0 chr2 28112610 28112710 -222575144 + L2 LINE L2 3190 3312 -1 206 291 0 0 chr2 28113587 28113642 -222574212 + L2 LINE L2 3216 3270 -2 340 358 11 16 chr2 28114192 28114379 -222573475 - L1M4 LINE L1 -3552 2594 2409 241 222 10 30 chr2 28114476 28114575 -222573279 - L1M4 LINE L1 -3794 2352 2256 25 0 0 0 chr2 28114617 28114642 -222573212 + AT_rich Low_complexity Low_complexity 1 25 0 19845 85 23 4 chr2 28114789 28115696 -222572158 + Charlie3 DNA MER1_type 1 889 -1817 219 36 0 0 chr2 28115696 28115724 -222572130 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 19845 85 23 4 chr2 28115724 28117471 -222570383 + Charlie3 DNA MER1_type 889 2706 0 23 86 0 0 chr2 28117752 28117810 -222570044 + AT_rich Low_complexity Low_complexity 1 58 0 846 288 4 13 chr2 28117855 28118088 -222569766 + MIR SINE MIR 32 262 0 276 354 18 18 chr2 28118123 28118236 -222569618 - L2 LINE L2 -226 3046 2934 241 307 80 33 chr2 28118503 28118653 -222569201 + MIR SINE MIR 7 163 -99 21 0 0 0 chr2 28118734 28118755 -222569099 + AT_rich Low_complexity Low_complexity 1 21 0 3019 237 83 31 chr2 28119743 28119868 -222567986 + L1MEc LINE L1 800 917 -5479 2077 149 0 0 chr2 28119868 28120164 -222567690 - AluJo SINE Alu -16 296 1 3019 237 83 31 chr2 28120164 28121248 -222566606 + L1MEc LINE L1 917 2072 -4324 754 164 8 22 chr2 28121273 28121407 -222566447 + FLAM_C SINE Alu 2 133 0 2344 61 0 0 chr2 28121640 28121948 -222565906 - AluY SINE Alu 0 308 1 374 177 0 0 chr2 28122367 28122429 -222565425 - L2 LINE L2 -250 3063 3002 1875 135 15 7 chr2 28122680 28122954 -222564900 + AluJo SINE Alu 17 292 -20 222 296 62 0 chr2 28123568 28123649 -222564205 - MIR SINE MIR -108 154 69 1797 152 17 10 chr2 28124737 28125039 -222562815 + AluJb SINE Alu 1 304 -8 1725 148 30 11 chr2 28125042 28125312 -222562542 + AluSg SINE Alu 1 275 -35 211 151 19 57 chr2 28125695 28125719 -222562135 + (CAGAGA)n Simple_repeat Simple_repeat 2 25 -27 2196 120 0 0 chr2 28125719 28126019 -222561835 + AluSx SINE Alu 1 300 -12 211 151 19 57 chr2 28126019 28126047 -222561807 + (CAGAGA)n Simple_repeat Simple_repeat 25 52 0 302 292 100 46 chr2 28126058 28126188 -222561666 - L2 LINE L2 0 3272 3136 2111 91 28 3 chr2 28126697 28126983 -222560871 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr2 28127220 28127242 -222560612 + AT_rich Low_complexity Low_complexity 1 22 0 1592 171 7 31 chr2 28127764 28128082 -222559772 - AluJb SINE Alu 0 311 1 1362 158 108 23 chr2 28128206 28128505 -222559349 - AluJb SINE Alu 0 321 1 26 0 0 0 chr2 28129415 28129441 -222558413 + AT_rich Low_complexity Low_complexity 1 26 0 2520 205 46 34 chr2 28129634 28130311 -222557543 - L1ME1 LINE L1 -4 6231 5547 1748 134 0 103 chr2 28130414 28130743 -222557111 - AluJb SINE Alu -17 295 1 3684 230 67 82 chr2 28130770 28132521 -222555333 - L1ME1 LINE L1 -1291 4924 3199 788 210 64 72 chr2 28132532 28132922 -222554932 - L1ME1 LINE L1 -3961 2254 1900 1636 217 59 33 chr2 28132925 28133903 -222553951 - L1M4 LINE L1 -789 5357 4106 2319 107 0 0 chr2 28133903 28134202 -222553652 + AluSx SINE Alu 1 299 -13 1636 217 59 33 chr2 28134202 28134363 -222553491 - L1M4 LINE L1 -2040 4106 3951 2286 84 10 3 chr2 28134665 28134964 -222552890 + AluSx SINE Alu 1 301 -11 4497 211 86 80 chr2 28135766 28137118 -222550736 - L1M4 LINE L1 -2196 3950 2583 935 103 0 14 chr2 28137118 28137264 -222550590 - L1PB1 LINE L1 -1 6150 6007 4497 211 86 80 chr2 28137264 28137738 -222550116 - L1M4 LINE L1 -3563 2583 2113 1526 168 103 0 chr2 28138444 28138587 -222549267 - AluJo SINE Alu -23 289 162 1688 164 0 13 chr2 28138587 28138885 -222548969 - AluJo SINE Alu -9 303 10 1526 168 103 0 chr2 28138885 28139003 -222548851 - AluJo SINE Alu -150 162 1 22 56 0 0 chr2 28140147 28140183 -222547671 + AT_rich Low_complexity Low_complexity 1 36 0 210 225 0 0 chr2 28141937 28141977 -222545877 + L2 LINE L2 3231 3270 -2 254 412 91 3 chr2 28142019 28142349 -222545505 + L3 LINE CR1 96 454 -1123 1585 243 101 87 chr2 28143067 28143652 -222544202 + MLT1H1 LTR MaLR 1 553 -2 496 181 16 0 chr2 28143868 28143995 -222543859 + (TA)n Simple_repeat Simple_repeat 2 130 0 25 0 0 0 chr2 28143999 28144024 -222543830 + AT_rich Low_complexity Low_complexity 1 25 0 353 312 85 30 chr2 28146025 28146224 -222541630 - MIR SINE MIR -40 222 13 2383 114 16 19 chr2 28146664 28147031 -222540823 + MER47A DNA MER2_type 1 366 0 1995 160 0 7 chr2 28147134 28147441 -222540413 - AluJo SINE Alu -7 305 1 1436 202 30 14 chr2 28147513 28147810 -222540044 - AluJo SINE Alu -8 304 3 2298 115 0 0 chr2 28148599 28148911 -222538943 + AluSx SINE Alu 1 312 0 966 324 180 57 chr2 28148983 28149388 -222538466 + L3 LINE CR1 320 673 -904 1387 181 169 49 chr2 28149388 28149796 -222538058 + MSTB2 LTR MaLR 1 457 0 966 324 180 57 chr2 28149796 28150432 -222537422 + L3 LINE CR1 673 1490 -87 287 225 45 34 chr2 28150520 28150609 -222537245 - MER94 DNA DNA -43 91 2 1017 218 36 27 chr2 28150740 28151071 -222536783 - L1MC5 LINE L1 -34 7927 7594 222 196 43 0 chr2 28151071 28151117 -222536737 + (CATA)n Simple_repeat Simple_repeat 1 48 0 194 229 14 0 chr2 28151217 28151287 -222536567 + CT-rich Low_complexity Low_complexity 3 73 0 1592 195 67 69 chr2 28151330 28152030 -222535824 - L1MC5 LINE L1 -466 7495 6766 249 261 29 0 chr2 28152510 28152579 -222535275 - LTR16C LTR ERVL 0 491 421 1998 125 50 39 chr2 28152580 28152940 -222534914 + THE1B LTR MaLR 1 364 0 10279 84 104 1 chr2 28152940 28154372 -222533482 + THE1B-int LTR MaLR 1 1580 0 2254 112 48 28 chr2 28154372 28154729 -222533125 + THE1B LTR MaLR 1 364 0 588 338 110 0 chr2 28154729 28155037 -222532817 - LTR16C LTR ERVL -67 424 83 952 218 0 33 chr2 28155104 28155315 -222532539 + MER20 DNA MER1_type 16 219 0 1294 260 45 69 chr2 28155916 28156608 -222531246 - L1MC4 LINE L1 -148 7894 7220 660 309 92 20 chr2 28157574 28157869 -222529985 + L3 LINE CR1 1161 1476 -101 1076 161 33 5 chr2 28157930 28158141 -222529713 + MER33 DNA MER1_type 1 217 -107 27 0 0 0 chr2 28158154 28158181 -222529673 + AT_rich Low_complexity Low_complexity 1 27 0 2153 103 10 3 chr2 28158183 28158475 -222529379 - AluSx SINE Alu -16 296 3 245 202 105 81 chr2 28159036 28159160 -222528694 + L1ME1 LINE L1 316 442 -5628 5633 231 50 51 chr2 28159325 28162121 -222525733 + L1ME1 LINE L1 3293 6080 -20 437 158 33 17 chr2 28162121 28162241 -222525613 + MER33 DNA MER1_type 203 324 0 1319 314 64 37 chr2 28162701 28163406 -222524448 + L3 LINE CR1 674 1397 -180 2431 150 36 7 chr2 28163451 28163865 -222523989 + MSTB LTR MaLR 1 426 0 5071 113 7 16 chr2 28164041 28164430 -222523424 - L1PA15 LINE L1 0 6165 5785 2213 121 0 19 chr2 28164430 28164744 -222523110 - AluSx SINE Alu -4 308 1 5071 113 7 16 chr2 28164744 28165127 -222522727 - L1PA15 LINE L1 -380 5785 5400 21 36 0 0 chr2 28166144 28166172 -222521682 + AT_rich Low_complexity Low_complexity 1 28 0 1256 151 37 0 chr2 28166205 28166450 -222521404 + L1MA4 LINE L1 6038 6291 -9 4587 160 37 18 chr2 28166754 28168007 -222519847 - L1MB7 LINE L1 -10 6174 4899 429 97 28 0 chr2 28168022 28168094 -222519760 - L1MB2 LINE L1 -4 6167 6094 2236 184 45 12 chr2 28168109 28168256 -222519598 - L1MB2 LINE L1 -228 5943 5802 351 0 0 0 chr2 28168256 28168295 -222519559 + (CA)n Simple_repeat Simple_repeat 2 40 0 2236 184 45 12 chr2 28168295 28168631 -222519223 - L1MB2 LINE L1 -369 5802 5444 * 2945 239 26 11 chr2 28168627 28169440 -222518414 - L1MB7 LINE L1 -1237 4909 4085 33 25 0 0 chr2 28170036 28170076 -222517778 + AT_rich Low_complexity Low_complexity 1 40 0 5588 78 14 1 chr2 28170111 28170469 -222517385 - L1PB1 LINE L1 -1 6150 5798 369 0 0 0 chr2 28170469 28170510 -222517344 + (TG)n Simple_repeat Simple_repeat 2 42 0 5588 78 14 1 chr2 28170510 28170919 -222516935 - L1PB1 LINE L1 -353 5798 5373 581 257 67 26 chr2 28172468 28172692 -222515162 - MIR SINE MIR -16 246 20 1926 170 0 0 chr2 28172945 28173245 -222514609 + AluJb SINE Alu 1 300 -12 22 0 0 0 chr2 28174517 28174539 -222513315 + AT_rich Low_complexity Low_complexity 1 22 0 186 376 92 9 chr2 28174740 28174849 -222513005 - L2 LINE L2 -218 3054 2937 237 288 38 12 chr2 28175279 28175359 -222512495 - MIR3 SINE MIR -14 194 113 31 26 0 0 chr2 28176117 28176155 -222511699 + AT_rich Low_complexity Low_complexity 1 38 0 25 51 0 0 chr2 28176216 28176255 -222511599 + AT_rich Low_complexity Low_complexity 1 39 0 267 324 0 14 chr2 28176514 28176585 -222511269 - MER5A DNA MER1_type 0 189 120 214 313 144 62 chr2 28176516 28176676 -222511178 + MER5A DNA MER1_type 17 189 0 * 4100 156 68 43 chr2 28176783 28177675 -222510179 - L1MB7 LINE L1 0 6184 5270 1110 283 67 59 chr2 28178128 28178499 -222509355 + L2 LINE L2 2816 3193 -120 500 236 18 0 chr2 28178499 28178609 -222509245 + MER81 DNA DNA 2 113 -1 1110 283 67 59 chr2 28178609 28178731 -222509123 + L2 LINE L2 3193 3313 0 1910 218 65 17 chr2 28179734 28180258 -222507596 - L1ME3A LINE L1 -11 6159 5611 539 248 242 28 chr2 28180298 28180922 -222506932 - LTR41 LTR ERVL -2 793 1 407 333 69 43 chr2 28180940 28180985 -222506869 - L1ME LINE L1 -5110 960 918 2363 85 0 3 chr2 28180985 28181292 -222506562 - AluY SINE Alu -5 306 1 407 333 69 43 chr2 28181292 28181637 -222506217 - L1ME LINE L1 -5152 918 560 21 0 0 0 chr2 28182390 28182411 -222505443 + AT_rich Low_complexity Low_complexity 1 21 0 32 81 0 0 chr2 28182490 28182564 -222505290 + AT_rich Low_complexity Low_complexity 1 74 0 2152 116 0 0 chr2 28183285 28183577 -222504277 + AluSg SINE Alu 1 292 -18 31 26 0 0 chr2 28183703 28183741 -222504113 + AT_rich Low_complexity Low_complexity 1 38 0 191 389 40 32 chr2 28184457 28184583 -222503271 + L2 LINE L2 3108 3234 -38 264 343 76 19 chr2 28184697 28184907 -222502947 - L2 LINE L2 -226 3046 2825 6284 147 50 38 chr2 28185382 28186644 -222501210 - L1MC3 LINE L1 -8 7777 6501 268 295 13 0 chr2 28186720 28186798 -222501056 - L2 LINE L2 -1 3312 3234 203 327 46 26 chr2 28186812 28186938 -222500916 - L2 LINE L2 0 3313 3093 2364 159 68 5 chr2 28186958 28187353 -222500501 - MSTB LTR MaLR -6 420 1 488 253 18 35 chr2 28187418 28187588 -222500266 - MLT1K LTR MaLR 0 588 422 661 269 81 15 chr2 28187968 28188302 -222499552 + L1MEc LINE L1 1346 1701 -4695 342 276 0 48 chr2 28188697 28188802 -222499052 - MER5B DNA MER1_type -37 141 42 1293 164 14 0 chr2 28188809 28189022 -222498832 + AluJb SINE Alu 87 302 -10 713 169 97 19 chr2 28190102 28190256 -222497598 - AluJb SINE Alu -11 301 136 21 36 0 0 chr2 28190542 28190570 -222497284 + AT_rich Low_complexity Low_complexity 1 28 0 688 221 59 37 chr2 28191172 28191443 -222496411 - L1MC5 LINE L1 -82 7879 7603 708 189 60 37 chr2 28191449 28191666 -222496188 - L1MC5 LINE L1 -407 7554 7333 24 32 0 0 chr2 28192384 28192415 -222495439 + AT_rich Low_complexity Low_complexity 1 31 0 206 333 17 0 chr2 28192651 28192768 -222495086 + (TA)n Simple_repeat Simple_repeat 1 119 0 188 398 55 16 chr2 28193417 28193545 -222494309 - L2 LINE L2 -2 3270 3138 225 183 0 141 chr2 28193786 28193857 -222493997 - Charlie8 DNA MER1_type 0 2417 2357 262 305 29 29 chr2 28194615 28194720 -222493134 + MER5A DNA MER1_type 65 169 -9 28 0 0 0 chr2 28194818 28194846 -222493008 + AT_rich Low_complexity Low_complexity 1 28 0 689 279 71 75 chr2 28196045 28196607 -222491247 - MLT1K LTR MaLR -27 561 2 207 0 0 0 chr2 28199078 28199101 -222488753 + (A)n Simple_repeat Simple_repeat 1 23 0 324 0 0 0 chr2 28199107 28199143 -222488711 + (CA)n Simple_repeat Simple_repeat 2 37 0 195 129 0 0 chr2 28200002 28200033 -222487821 + (T)n Simple_repeat Simple_repeat 1 31 0 285 281 10 10 chr2 28201189 28201285 -222486569 + CT-rich Low_complexity Low_complexity 2 97 0 281 284 0 0 chr2 28202365 28202432 -222485422 + L3 LINE CR1 1247 1313 -264 2135 169 52 12 chr2 28202917 28203397 -222484457 - L1MB8 LINE L1 -1 6177 5679 5312 134 20 38 chr2 28203410 28204259 -222483595 - L1PB1 LINE L1 0 6151 5331 3706 79 0 0 chr2 28204259 28204740 -222483114 - L1PA8 LINE L1 -13 6159 5679 5312 134 20 38 chr2 28204740 28205381 -222482473 - L1PB1 LINE L1 -820 5331 4680 366 294 99 64 chr2 28205813 28206126 -222481728 - L1ME4a LINE L1 -23 6098 5775 264 271 54 60 chr2 28206187 28206353 -222481501 - L1ME4a LINE L1 -362 5759 5595 351 0 0 0 chr2 28206366 28206405 -222481449 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 28208611 28208632 -222479222 + AT_rich Low_complexity Low_complexity 1 21 0 2261 202 37 26 chr2 28209261 28209536 -222478318 + Charlie1a DNA MER1_type 5 275 -2486 2582 27 0 7 chr2 28209536 28209833 -222478021 + AluY SINE Alu 1 295 -16 2261 202 37 26 chr2 28209833 28210101 -222477753 + Charlie1a DNA MER1_type 275 554 -901 21 0 0 0 chr2 28210276 28210297 -222477557 + AT_rich Low_complexity Low_complexity 1 21 0 347 301 82 7 chr2 28211020 28211166 -222476688 - MER5A DNA MER1_type -31 158 2 21 57 0 0 chr2 28212177 28212212 -222475642 + AT_rich Low_complexity Low_complexity 1 35 0 358 255 121 13 chr2 28212313 28212462 -222475392 + MIR SINE MIR 77 241 -21 1689 183 26 10 chr2 28212953 28213259 -222474595 + AluJb SINE Alu 1 311 -1 207 193 23 45 chr2 28214090 28214178 -222473676 + (TTATA)n Simple_repeat Simple_repeat 2 87 0 22 35 0 0 chr2 28214368 28214397 -222473457 + AT_rich Low_complexity Low_complexity 1 29 0 2151 51 0 0 chr2 28214595 28214849 -222473005 - AluY SINE Alu -14 297 44 2490 226 149 12 chr2 28214865 28215605 -222472249 + L2 LINE L2 1706 2546 -768 496 153 0 0 chr2 28216214 28216286 -222471568 - FLAM_A SINE Alu -54 88 17 2119 86 0 7 chr2 28216425 28216694 -222471160 - AluY SINE Alu -44 267 1 21 36 0 0 chr2 28216796 28216824 -222471030 + AT_rich Low_complexity Low_complexity 1 28 0 196 252 130 16 chr2 28216891 28217014 -222470840 - L2 LINE L2 -144 3169 3033 2198 102 0 3 chr2 28217690 28217985 -222469869 - AluSq SINE Alu -17 296 3 337 301 7 98 chr2 28218361 28218514 -222469340 + MIR3 SINE MIR 2 140 -68 2518 76 0 0 chr2 28218728 28219031 -222468823 - AluY SINE Alu -8 303 1 205 260 60 0 chr2 28219090 28219140 -222468714 + MIR3 SINE MIR 149 201 -7 666 144 30 66 chr2 28219400 28219567 -222468287 - L1MB3 LINE L1 0 6183 6023 222 274 83 12 chr2 28220201 28220285 -222467569 + MIR SINE MIR 60 149 -113 313 348 22 38 chr2 28220766 28220950 -222466904 + L2 LINE L2 2217 2397 -917 1604 164 7 41 chr2 28221101 28221418 -222466436 - AluJb SINE Alu 0 307 1 22 106 0 0 chr2 28221434 28221519 -222466335 + AT_rich Low_complexity Low_complexity 1 85 0 279 79 0 0 chr2 28221809 28221847 -222466007 + (CA)n Simple_repeat Simple_repeat 1 38 0 204 40 0 0 chr2 28221846 28221871 -222465983 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1213 184 5 22 chr2 28222947 28223170 -222464684 + MER20 DNA MER1_type 1 219 0 420 208 0 0 chr2 28223341 28223442 -222464412 + (TA)n Simple_repeat Simple_repeat 2 102 0 1018 92 10 146 chr2 28224012 28224218 -222463636 + AluSp SINE Alu 136 313 0 1702 116 0 21 chr2 28224225 28224466 -222463388 + AluSc SINE Alu 71 306 -3 270 261 14 0 chr2 28224466 28224535 -222463319 - L1MEd LINE L1 -6037 82 13 469 288 96 0 chr2 28224708 28224854 -222463000 + L2 LINE L2 2580 2739 -575 453 247 43 19 chr2 28225246 28225406 -222462448 + L1MC3 LINE L1 5983 6146 -20 987 206 70 58 chr2 28225585 28225929 -222461925 - L1MC5 LINE L1 -865 7096 6749 881 204 0 0 chr2 28225946 28226093 -222461761 - FRAM SINE Alu -17 159 13 1616 103 0 0 chr2 28226097 28226301 -222461553 - AluSc SINE Alu -15 294 91 2551 54 0 0 chr2 28226309 28226605 -222461249 - AluY SINE Alu -15 296 1 330 280 34 17 chr2 28226607 28226725 -222461129 - L1MC4a LINE L1 -1075 6733 6614 367 233 93 13 chr2 28226743 28226893 -222460961 - L1MC5 LINE L1 -46 7915 7754 1770 181 0 10 chr2 28227134 28227422 -222460432 + AluJo SINE Alu 2 286 -26 547 198 0 9 chr2 28227849 28227965 -222459889 + L1M4 LINE L1 4834 4948 -1198 2550 77 0 0 chr2 28227975 28228286 -222459568 + AluY SINE Alu 1 311 0 201 167 0 0 chr2 28228313 28228349 -222459505 + (TA)n Simple_repeat Simple_repeat 2 37 0 422 177 21 0 chr2 28228353 28228449 -222459405 + L1M4 LINE L1 4976 5073 -1073 327 248 120 0 chr2 28228453 28228578 -222459276 + Charlie1 DNA MER1_type 2622 2761 0 2247 115 3 0 chr2 28228648 28228952 -222458902 + AluSx SINE Alu 1 305 -7 2230 101 7 3 chr2 28228955 28229261 -222458593 + AluSc SINE Alu 1 307 -2 334 266 176 75 chr2 28229627 28229938 -222457916 + MLT1K LTR MaLR 11 370 -218 1311 205 28 6 chr2 28229938 28230255 -222457599 - MER33 DNA MER1_type 0 324 1 334 266 176 75 chr2 28230255 28230330 -222457524 + MLT1K LTR MaLR 370 436 -152 1726 134 19 0 chr2 28230512 28230819 -222457035 - L1MB8 LINE L1 -189 5989 5677 1089 247 141 37 chr2 28230950 28231411 -222456443 - MLT1E LTR MaLR 0 593 85 490 255 21 21 chr2 28231518 28231659 -222456195 + L2 LINE L2 3158 3298 -15 195 42 0 0 chr2 28231660 28231684 -222456170 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 2380 113 0 0 chr2 28231788 28232098 -222455756 - AluSx SINE Alu -2 310 1 3476 146 43 0 chr2 28232251 28232861 -222454993 - L1MB2 LINE L1 -14 6157 5522 216 306 0 0 chr2 28233059 28233108 -222454746 - L3 LINE CR1 -1328 249 201 317 299 15 0 chr2 28233978 28234112 -222453742 - L1MEc LINE L1 -4950 1446 1311 734 96 0 10 chr2 28236642 28236746 -222451108 - AluSp SINE Alu -210 103 1 2128 67 15 0 chr2 28236910 28237218 -222450636 - AluY SINE Alu 0 325 14 387 0 0 0 chr2 28237353 28237396 -222450458 + (TG)n Simple_repeat Simple_repeat 2 44 0 202 374 0 22 chr2 28237499 28237590 -222450264 + L2 LINE L2 3225 3313 0 2317 108 3 0 chr2 28238245 28238587 -222449267 - L1PA7 LINE L1 -1844 4302 3960 7020 71 35 1 chr2 28238589 28240352 -222447502 + L1PA7 LINE L1 4313 6135 -19 554 102 0 11 chr2 28240352 28240440 -222447414 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 403 37 0 0 chr2 28240540 28240594 -222447260 + AluSp/q SINE Alu 247 300 -13 4453 86 5 7 chr2 28242616 28243662 -222444192 - L1PA8A LINE L1 -411 5720 4676 609 263 198 9 chr2 28244904 28245121 -222442733 + MIR SINE MIR 5 262 0 1113 236 59 34 chr2 28245956 28246397 -222441457 - L1M4 LINE L1 -1626 4520 4069 381 251 0 118 chr2 28246397 28246584 -222441270 - L1M4 LINE L1 -2346 3800 3636 261 314 36 71 chr2 28246991 28247131 -222440723 - MIR3 SINE MIR -17 191 57 310 297 65 33 chr2 28247604 28247754 -222440100 - MIR SINE MIR -62 146 40 2154 99 3 0 chr2 28248011 28248295 -222439559 + AluSc SINE Alu 2 286 -23 29 28 0 0 chr2 28248567 28248603 -222439251 + AT_rich Low_complexity Low_complexity 1 36 0 318 235 83 36 chr2 28248841 28248971 -222438883 + MIR SINE MIR 31 164 -65 272 301 65 0 chr2 28249533 28249626 -222438228 - L2 LINE L2 -16 3297 3199 804 175 78 6 chr2 28249798 28249964 -222437890 - MER5B DNA MER1_type 0 178 1 2205 102 7 3 chr2 28250602 28250895 -222436959 + AluSx SINE Alu 1 294 -18 557 260 122 29 chr2 28250986 28251310 -222436544 - L1MCb LINE L1 -5791 254 46 328 277 0 84 chr2 28252013 28252132 -222435722 - MIR SINE MIR -134 128 20 2410 80 0 3 chr2 28252849 28253149 -222434705 + AluSx SINE Alu 3 301 -11 265 267 130 23 chr2 28253661 28253792 -222434062 + L1ME3A LINE L1 6018 6162 -8 2166 105 0 66 chr2 28253986 28254320 -222433534 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 28254505 28254530 -222433324 + AT_rich Low_complexity Low_complexity 1 25 0 2090 211 143 2 chr2 28254572 28255060 -222432794 - MLT1F1 LTR MaLR 0 567 11 2055 96 57 0 chr2 28255079 28255359 -222432495 - AluSq SINE Alu -17 296 1 203 184 0 0 chr2 28255391 28255429 -222432425 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 181 279 35 35 chr2 28255649 28255735 -222432119 - L2 LINE L2 -310 2962 2877 193 317 79 30 chr2 28255945 28256046 -222431808 + L2 LINE L2 3193 3298 -15 26 50 0 0 chr2 28256056 28256096 -222431758 + AT_rich Low_complexity Low_complexity 1 40 0 340 153 0 34 chr2 28257434 28257493 -222430361 - L2 LINE L2 -1 3312 3256 412 234 71 35 chr2 28257830 28257971 -222429883 + MIR SINE MIR 116 261 -1 890 184 0 7 chr2 28258010 28258162 -222429692 - FRAM SINE Alu -20 156 6 1162 23 0 0 chr2 28258674 28258806 -222429048 - AluYa5/8 SINE Alu -9 302 171 316 275 61 46 chr2 28259035 28259166 -222428688 + MIR SINE MIR 17 149 -113 764 198 84 55 chr2 28259359 28259632 -222428222 - L1MC5 LINE L1 -435 7526 7246 477 245 84 21 chr2 28259839 28259982 -222427872 + L2 LINE L2 3162 3313 0 261 0 0 0 chr2 28261077 28261106 -222426748 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1574 189 18 0 chr2 28261108 28261383 -222426471 - AluJo SINE Alu -31 281 2 7549 29 5 0 chr2 28261809 28262968 -222424886 + L1PA5 LINE L1 4983 6145 -9 262 386 44 0 chr2 28263253 28263411 -222424443 + MIR SINE MIR 13 177 -85 780 176 28 60 chr2 28263820 28264036 -222423818 - L1MC4 LINE L1 -152 7890 7682 529 116 23 12 chr2 28264070 28264156 -222423698 - FLAM SINE Alu -16 127 41 1541 213 80 4 chr2 28264173 28264662 -222423192 - L1MC4 LINE L1 -363 7679 6990 694 177 19 32 chr2 28264669 28264827 -222423027 - L1MC4 LINE L1 -1410 6632 6477 254 372 105 21 chr2 28264997 28265330 -222422524 + L2 LINE L2 2600 2960 -354 30 0 0 0 chr2 28267153 28267183 -222420671 + AT_rich Low_complexity Low_complexity 1 30 0 210 238 0 0 chr2 28267310 28267352 -222420502 + L2 LINE L2 3264 3305 -8 273 241 17 0 chr2 28267547 28267605 -222420249 - MIR3 SINE MIR -3 205 147 1389 235 108 38 chr2 28267645 28268173 -222419681 - L1MC4a LINE L1 -1680 6128 5564 253 164 233 27 chr2 28268177 28268250 -222419604 - MIR SINE MIR -116 146 59 600 285 19 94 chr2 28268256 28268512 -222419342 + L2 LINE L2 3035 3271 -1 425 311 122 39 chr2 28268618 28268904 -222418950 + L3 LINE CR1 856 1165 -412 356 348 43 7 chr2 28268939 28269080 -222418774 - MIR SINE MIR -109 153 8 224 221 0 15 chr2 28269710 28269778 -222418076 + CT-rich Low_complexity Low_complexity 3 69 0 337 271 124 23 chr2 28269797 28269974 -222417880 - L1ME LINE L1 -407 5714 5520 277 275 81 34 chr2 28271125 28271445 -222416409 - L1ME LINE L1 -1555 4591 4257 305 333 146 19 chr2 28272427 28272748 -222415106 - L1ME LINE L1 -2201 3945 3584 2197 92 0 38 chr2 28273181 28273496 -222414358 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr2 28275271 28275294 -222412560 + AT_rich Low_complexity Low_complexity 1 23 0 2255 102 0 16 chr2 28275438 28275752 -222412102 + AluSx SINE Alu 1 309 -3 25 31 0 0 chr2 28275943 28275975 -222411879 + AT_rich Low_complexity Low_complexity 1 32 0 1185 186 219 0 chr2 28276053 28276295 -222411559 - AluJb SINE Alu -7 295 1 485 286 44 118 chr2 28279223 28279586 -222408268 - MER102b DNA MER1_type -5 336 1 1131 112 10 36 chr2 28280919 28281115 -222406739 - AluSq SINE Alu -18 295 105 990 153 31 0 chr2 28281869 28282032 -222405822 - MER58B DNA MER1_type 0 341 174 836 78 0 0 chr2 28282034 28282150 -222405704 + L1MA5A LINE L1 6178 6293 -4 262 229 0 0 chr2 28282226 28282274 -222405580 - MER58B DNA MER1_type -292 49 2 253 264 7 101 chr2 28282518 28282581 -222405273 + MIR SINE MIR 97 140 -122 1641 176 35 67 chr2 28282581 28282955 -222404899 + MLT1A1 LTR MaLR 4 365 0 253 264 7 101 chr2 28282955 28283039 -222404815 + MIR SINE MIR 140 230 -32 2996 131 4 0 chr2 28283117 28283575 -222404279 + L1PA15 LINE L1 5706 6165 0 2988 194 25 56 chr2 28283789 28284557 -222403297 + L1MA9 LINE L1 5544 6287 -25 22 0 0 0 chr2 28284601 28284623 -222403231 + AT_rich Low_complexity Low_complexity 1 22 0 549 319 16 11 chr2 28285186 28285368 -222402486 - L3 LINE CR1 -364 1213 1031 226 313 192 37 chr2 28285906 28286002 -222401852 - L2 LINE L2 -189 3083 3003 2322 78 7 3 chr2 28286002 28286297 -222401557 + AluY SINE Alu 1 296 -15 226 313 192 37 chr2 28286297 28286414 -222401440 - L2 LINE L2 -269 3003 2837 204 40 0 0 chr2 28286693 28286718 -222401136 + (TA)n Simple_repeat Simple_repeat 2 26 0 916 193 99 12 chr2 28286847 28287090 -222400764 + MER5C DNA MER1_type 60 323 -1 22 0 0 0 chr2 28287242 28287264 -222400590 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 28287334 28287358 -222400496 + AT_rich Low_complexity Low_complexity 1 24 0 794 221 149 0 chr2 28287734 28287942 -222399912 + Charlie1 DNA MER1_type 1 239 -2522 4635 229 38 10 chr2 28288000 28289253 -222398601 + L1M4 LINE L1 3488 4774 -1372 275 341 77 0 chr2 28289373 28289464 -222398390 + L3 LINE CR1 63 160 -1417 796 309 146 12 chr2 28289507 28289992 -222397862 + L3 LINE CR1 264 813 -764 786 229 240 4 chr2 28291301 28291559 -222396295 - L1MD2 LINE L1 -11 6348 6030 2160 141 141 21 chr2 28291798 28292174 -222395680 - MSTC LTR MaLR 0 428 8 230 366 8 8 chr2 28293114 28293245 -222394609 - L2 LINE L2 -1407 1907 1777 1251 146 87 78 chr2 28293438 28293759 -222394095 + MER33 DNA MER1_type 1 324 0 264 272 0 48 chr2 28295201 28295229 -222392625 + LTR67 LTR ERVL 456 553 -4 314 213 27 27 chr2 28295229 28295304 -222392550 + MLT1K LTR MaLR 510 584 -4 357 253 154 6 chr2 28295327 28295489 -222392365 + L2 LINE L2 3116 3301 -12 197 33 33 0 chr2 28295490 28295520 -222392334 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1453 274 94 26 chr2 28295572 28296232 -222391622 - L1MC4a LINE L1 -1643 6165 5461 488 301 51 0 chr2 28296233 28296389 -222391465 + L1ME LINE L1 308 471 -5901 * 620 278 69 18 chr2 28296378 28296655 -222391199 + L1ME LINE L1 1198 1488 -4896 3801 163 1 1 chr2 28296864 28297521 -222390333 - L1PA16 LINE L1 -1 6165 5509 479 272 81 0 chr2 28297548 28297684 -222390170 + L2 LINE L2 3167 3313 0 327 277 40 61 chr2 28297688 28297836 -222390018 + MIR SINE MIR 47 191 -71 2809 10 0 0 chr2 28298783 28299091 -222388763 - AluYa5 SINE Alu -3 308 1 366 311 98 6 chr2 28300087 28300251 -222387603 + L2 LINE L2 2862 3040 -273 478 270 73 0 chr2 28300278 28300415 -222387439 - L2 LINE L2 -564 2750 2604 1964 86 11 39 chr2 28300518 28300797 -222387057 - AluY SINE Alu -40 271 1 239 259 0 0 chr2 28301876 28301930 -222385924 - L2 LINE L2 -838 2476 2423 2116 161 17 128 chr2 28301943 28302535 -222385319 + Tigger7 DNA MER2_type 1 526 -1961 510 204 0 11 chr2 28302529 28302622 -222385232 + Tigger7 DNA MER2_type 2496 2587 0 * 459 262 63 46 chr2 28302630 28302867 -222384987 - L2 LINE L2 -882 2432 2192 242 125 21 0 chr2 28302871 28302919 -222384935 + CT-rich Low_complexity Low_complexity 2 50 0 370 294 79 8 chr2 28304157 28304283 -222383571 + MIR3 SINE MIR 67 201 -7 683 223 94 40 chr2 28306394 28306618 -222381236 + MIR SINE MIR 12 247 -15 223 361 58 24 chr2 28307418 28307623 -222380231 + L2 LINE L2 1194 1405 -1909 268 218 73 0 chr2 28310484 28310539 -222377315 - L2 LINE L2 0 3272 3214 292 260 89 123 chr2 28310870 28311110 -222376744 + L1MC/D LINE L1 5297 5544 -2264 2402 69 3 0 chr2 28311110 28311437 -222376417 - AluSx SINE Alu 0 328 1 292 260 89 123 chr2 28311437 28311732 -222376122 + L1MC/D LINE L1 5544 5816 -1992 25 0 0 28 chr2 28311969 28311990 -222375864 + AT_rich Low_complexity Low_complexity 1 22 -13 7752 16 13 0 chr2 28311990 28313055 -222374799 - L1PA3 LINE L1 -3 6152 5083 25 0 0 28 chr2 28313055 28313069 -222374785 + AT_rich Low_complexity Low_complexity 22 35 0 416 332 152 23 chr2 28313070 28313419 -222374435 - L2 LINE L2 -1230 2084 1691 2418 56 0 20 chr2 28313653 28313956 -222373898 - AluY SINE Alu -14 297 1 208 246 87 43 chr2 28316234 28316303 -222371551 + L2 LINE L2 3186 3257 -15 1577 144 16 19 chr2 28316305 28316562 -222371292 - AluJo SINE Alu -20 292 37 2126 119 0 3 chr2 28316566 28316885 -222370969 - AluSx SINE Alu 0 312 1 2753 7 0 0 chr2 28316897 28317225 -222370629 - AluYa5 SINE Alu 0 328 1 643 258 100 29 chr2 28317285 28317525 -222370329 + MIR SINE MIR 2 258 -4 2542 64 0 0 chr2 28317971 28318282 -222369572 - AluY SINE Alu 0 311 1 284 383 48 13 chr2 28318346 28318576 -222369278 + L2 LINE L2 2852 3089 -183 25 51 0 0 chr2 28318588 28318627 -222369227 + AT_rich Low_complexity Low_complexity 1 39 0 586 259 144 10 chr2 28370110 28370311 -222317543 + MIR SINE MIR 35 262 0 308 271 50 50 chr2 28371614 28371754 -222316100 + MIR SINE MIR 53 192 -70 244 269 45 13 chr2 28372011 28372169 -222315685 - MIR SINE MIR -18 244 13 325 148 25 37 chr2 28372600 28372681 -222315173 + G-rich Low_complexity Low_complexity 1 80 0 225 323 131 10 chr2 28372695 28372764 -222315090 + MIR SINE MIR 21 107 -155 243 0 0 0 chr2 28372764 28372791 -222315063 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 225 323 131 10 chr2 28372791 28372820 -222315034 + MIR SINE MIR 107 131 -131 183 156 0 0 chr2 28372948 28372980 -222314874 + T-rich Low_complexity Low_complexity 4 35 0 1493 187 52 0 chr2 28373019 28373169 -222314685 - AluJo SINE Alu -31 281 109 245 51 26 0 chr2 28373169 28373208 -222314646 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1493 187 52 0 chr2 28373208 28373324 -222314530 - AluJo SINE Alu -203 109 1 868 146 79 18 chr2 28373558 28373723 -222314131 + MER53 DNA DNA 1 175 -14 215 215 15 62 chr2 28375127 28375192 -222312662 + MIR SINE MIR 85 146 -116 1220 132 0 0 chr2 28375398 28375565 -222312289 - AluSg/x SINE Alu -12 300 134 2419 75 0 16 chr2 28375565 28375871 -222311983 - AluSg SINE Alu -9 301 1 29 60 0 0 chr2 28376495 28376545 -222311309 + AT_rich Low_complexity Low_complexity 1 50 0 812 140 0 0 chr2 28377190 28377304 -222310550 - AluSq/x SINE Alu -199 114 1 1473 183 57 47 chr2 28377304 28377635 -222310219 - L1M4 LINE L1 -1436 4710 4373 2161 150 0 0 chr2 28377635 28377942 -222309912 - AluSx SINE Alu -3 309 3 1473 183 57 47 chr2 28377942 28378014 -222309840 - L1M4 LINE L1 -1773 4373 4303 2323 65 0 39 chr2 28378031 28378340 -222309514 - AluY SINE Alu -14 297 1 903 148 0 0 chr2 28379246 28379381 -222308473 + AluSq/x SINE Alu 1 135 -177 1926 91 84 15 chr2 28379391 28379665 -222308189 + AluSx SINE Alu 10 302 -10 493 322 173 24 chr2 28380062 28380432 -222307422 + L2 LINE L2 2848 3272 0 2467 65 0 0 chr2 28380889 28381179 -222306675 + AluY SINE Alu 1 290 -21 286 299 8 63 chr2 28381243 28381370 -222306484 + MIR SINE MIR 25 144 -64 472 213 0 32 chr2 28381404 28381498 -222306356 + AluJ/FLAM SINE Alu 2 92 -220 2492 87 3 0 chr2 28381680 28381992 -222305862 - AluSp SINE Alu 0 313 1 211 341 99 11 chr2 28382371 28382462 -222305392 - L2 LINE L2 -20 3252 3154 373 263 12 0 chr2 28382471 28382551 -222305303 + MER58 DNA MER1_type 1 81 -134 195 114 0 0 chr2 28382551 28382586 -222305268 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1794 136 0 4 chr2 28382589 28382847 -222305007 - AluSx SINE Alu -30 282 26 1692 212 18 68 chr2 28382948 28383005 -222304849 - L1ME LINE L1 -407 5759 5701 1688 180 44 3 chr2 28383005 28383299 -222304555 + AluJo SINE Alu 1 306 -6 2262 114 0 0 chr2 28383299 28383606 -222304248 + AluSx SINE Alu 1 308 -4 1692 212 18 68 chr2 28383606 28384005 -222303849 - L1ME LINE L1 -463 5703 5325 1224 160 9 43 chr2 28384007 28384183 -222303671 - AluJb SINE Alu -2 310 129 2299 95 0 3 chr2 28384183 28384478 -222303376 - AluSc SINE Alu -15 294 1 2322 108 7 0 chr2 28384480 28384787 -222303067 - AluSc SINE Alu 0 309 1 1224 160 9 43 chr2 28384787 28384838 -222303016 - AluJb SINE Alu -184 128 88 1534 237 97 0 chr2 28384849 28385304 -222302550 - L1ME LINE L1 -825 5321 4823 1603 115 13 4 chr2 28385306 28385532 -222302322 - AluSg/x SINE Alu -15 297 70 817 230 94 62 chr2 28385733 28385842 -222302012 + L1MD2 LINE L1 6027 6131 -228 198 103 0 0 chr2 28385842 28385871 -222301983 + (CA)n Simple_repeat Simple_repeat 2 30 0 817 230 94 62 chr2 28385871 28386070 -222301784 + L1MD2 LINE L1 6131 6345 -14 1999 125 3 32 chr2 28386787 28387098 -222300756 - AluJb SINE Alu -10 302 1 195 184 26 0 chr2 28387897 28387935 -222299919 - L2 LINE L2 -2 3311 3273 645 282 126 38 chr2 28388007 28388445 -222299409 + L2 LINE L2 2769 3247 -66 514 282 46 40 chr2 28388699 28388873 -222298981 - MIR SINE MIR -74 188 14 3514 193 116 30 chr2 28389221 28390178 -222297676 - L1MC4 LINE L1 0 8042 7004 1312 258 115 0 chr2 28390241 28390606 -222297248 - MLT1E2 LTR MaLR 0 626 220 605 223 133 70 chr2 28390742 28390929 -222296925 - L1MC5 LINE L1 -44 7917 7743 1860 151 6 31 chr2 28390929 28391248 -222296606 - AluJo SINE Alu -1 311 1 605 223 133 70 chr2 28391248 28391405 -222296449 - L1MC5 LINE L1 -218 7743 7551 2167 124 0 3 chr2 28391495 28391786 -222296068 - AluSx SINE Alu -22 290 1 1923 176 0 0 chr2 28391865 28392177 -222295677 - AluJb SINE Alu 0 312 1 1447 194 46 135 chr2 28392182 28392707 -222295147 - Charlie4a DNA MER1_type 0 508 31 206 277 31 15 chr2 28392797 28392862 -222294992 - MIR SINE MIR -103 105 40 2446 92 0 0 chr2 28392901 28393205 -222294649 - AluSx SINE Alu -8 304 1 462 226 43 0 chr2 28393404 28393519 -222294335 - L1ME1 LINE L1 -3 6163 6044 227 174 22 22 chr2 28394315 28394361 -222293493 - MIR3 SINE MIR -9 199 154 603 329 11 15 chr2 28395736 28395998 -222291856 - MIR SINE MIR 0 262 3 286 320 213 0 chr2 28396182 28396304 -222291550 - L2 LINE L2 0 3272 3125 1854 173 6 6 chr2 28396747 28397059 -222290795 - AluJo SINE Alu 0 312 1 2383 140 6 11 chr2 28397393 28397743 -222290111 - MER7A DNA MER2_type 0 346 1 435 325 30 20 chr2 28399045 28399245 -222288609 + MIR SINE MIR 20 221 -41 512 296 49 0 chr2 28400551 28400693 -222287161 + MER91A DNA MER1_type 21 169 -27 229 290 72 0 chr2 28400699 28400768 -222287086 + MER91A DNA MER1_type 123 196 0 249 217 33 109 chr2 28401478 28401524 -222286330 - MIR3 SINE MIR -7 201 164 1062 225 14 9 chr2 28401524 28401746 -222286108 - MER58A DNA MER1_type 0 224 2 249 217 33 109 chr2 28401746 28401791 -222286063 - MIR3 SINE MIR -44 164 117 333 0 0 0 chr2 28403295 28403332 -222284522 + (TG)n Simple_repeat Simple_repeat 2 38 0 326 232 21 0 chr2 28403834 28403929 -222283925 + CT-rich Low_complexity Low_complexity 4 100 0 289 250 116 9 chr2 28404222 28404334 -222283520 + MIR3 SINE MIR 53 176 -32 218 254 63 16 chr2 28404880 28404943 -222282911 - L2 LINE L2 0 3272 3207 27 0 0 0 chr2 28405156 28405183 -222282671 + AT_rich Low_complexity Low_complexity 1 27 0 222 339 42 92 chr2 28405495 28405755 -222282099 - L2 LINE L2 -22 3250 3004 2402 87 0 3 chr2 28406652 28406952 -222280902 - AluSq SINE Alu -12 301 3 351 264 66 26 chr2 28407006 28407233 -222280621 - L1MC5 LINE L1 -182 7779 7544 532 289 171 5 chr2 28407618 28407829 -222280025 + MIR SINE MIR 1 246 -16 1965 142 14 10 chr2 28407830 28408126 -222279728 - AluSx SINE Alu -15 297 1 2053 123 23 7 chr2 28409039 28409339 -222278515 - AluSq SINE Alu -8 305 1 2298 109 0 0 chr2 28410349 28410660 -222277194 + AluY SINE Alu 1 311 0 450 247 107 65 chr2 28410667 28410930 -222276924 + L1MEc LINE L1 1850 2123 -4273 350 260 88 103 chr2 28410942 28411281 -222276573 + L2 LINE L2 2851 3184 -129 1468 161 58 8 chr2 28411316 28411576 -222276278 + AluJb SINE Alu 1 273 -39 268 217 167 0 chr2 28411730 28411790 -222276064 - MER58 DNA MER1_type -1 2419 2350 262 352 82 38 chr2 28411962 28412121 -222275733 - L2 LINE L2 0 3272 3107 541 349 100 40 chr2 28412195 28412825 -222275029 - L2 LINE L2 -342 2972 2305 250 125 0 0 chr2 28413182 28413222 -222274632 + L1MB4 LINE L1 5892 5931 -249 189 107 0 0 chr2 28413240 28413268 -222274586 + (A)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 28413294 28413316 -222274538 + AT_rich Low_complexity Low_complexity 1 22 0 755 233 87 23 chr2 28413340 28413559 -222274295 - MIR SINE MIR -13 249 17 264 375 80 0 chr2 28414340 28414428 -222273426 - L2 LINE L2 -25 3247 3153 2185 90 35 0 chr2 28415263 28415551 -222272303 + AluSx SINE Alu 1 298 -14 228 240 0 20 chr2 28415727 28415777 -222272077 + (CA)n Simple_repeat Simple_repeat 1 49 0 1103 153 0 0 chr2 28416092 28416255 -222271599 - AluSg/x SINE Alu -11 301 139 2125 119 0 3 chr2 28416549 28416843 -222271011 + AluSq SINE Alu 1 293 -20 2285 112 0 3 chr2 28417942 28418247 -222269607 - AluSg SINE Alu -6 304 1 831 169 0 8 chr2 28418480 28418610 -222269244 - FLAM_C SINE Alu -4 129 1 288 176 15 59 chr2 28419418 28419486 -222268368 + MLT1L LTR MaLR 2 66 -549 742 241 256 9 chr2 28419544 28419868 -222267986 + MLT1L LTR MaLR 200 603 -12 1482 89 0 5 chr2 28420730 28420921 -222266933 - AluSq SINE Alu -9 304 115 236 262 9 84 chr2 28421292 28421399 -222266455 - MIR SINE MIR -46 216 118 1176 140 21 72 chr2 28421555 28421614 -222266240 - L1MD1 LINE L1 -10 6232 6172 2277 128 0 0 chr2 28421614 28421927 -222265927 + AluSq SINE Alu 1 313 0 1176 140 21 72 chr2 28421927 28422103 -222265751 - L1MD1 LINE L1 -70 6172 6009 357 24 0 0 chr2 28422165 28422207 -222265647 + (CA)n Simple_repeat Simple_repeat 2 43 0 521 184 132 7 chr2 28422465 28422601 -222265253 - MLT1J2 LTR MaLR -278 172 20 557 243 98 55 chr2 28422601 28422856 -222264998 + L1ME3A LINE L1 5685 5950 -220 583 187 89 16 chr2 28422931 28423054 -222264800 + FLAM_A SINE Alu 2 133 0 26 30 0 0 chr2 28424769 28424802 -222263052 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr2 28424923 28424943 -222262911 + (A)n Simple_repeat Simple_repeat 1 20 0 1512 214 89 3 chr2 28426037 28426350 -222261504 + MER58B DNA MER1_type 1 340 -1 730 290 82 51 chr2 28426480 28426870 -222260984 - L2 LINE L2 -13 3300 2899 357 264 95 10 chr2 28426946 28427188 -222260666 - L2 LINE L2 -815 2499 2185 444 217 40 86 chr2 28427833 28427985 -222259869 + MER5A DNA MER1_type 7 151 -38 587 287 66 11 chr2 28429303 28429518 -222258336 + MIR SINE MIR 38 262 0 194 291 81 12 chr2 28429552 28429638 -222258216 - L3b LINE CR1 -223 1360 1269 2266 113 0 16 chr2 28429645 28429956 -222257898 - AluSx SINE Alu -6 306 1 1878 137 29 29 chr2 28430505 28430811 -222257043 + AluJb SINE Alu 3 308 -4 757 241 65 5 chr2 28431068 28431304 -222256550 + MIR SINE MIR 2 249 -13 1364 239 7 7 chr2 28431863 28432173 -222255681 - AluJo SINE Alu 0 312 3 606 279 93 8 chr2 28433015 28433252 -222254602 - MIR SINE MIR 0 262 6 229 257 184 33 chr2 28433287 28433439 -222254415 - MIR SINE MIR -13 249 75 955 85 16 23 chr2 28433890 28434019 -222253835 - FLAM_C SINE Alu -4 129 2 2389 94 0 0 chr2 28434108 28434406 -222253448 - AluSg SINE Alu -12 298 1 2035 108 7 0 chr2 28436473 28436752 -222251102 - AluSx SINE Alu -4 308 28 192 77 0 0 chr2 28437211 28437237 -222250617 + (CA)n Simple_repeat Simple_repeat 2 27 0 243 153 119 0 chr2 28437432 28437491 -222250363 - L1ME3 LINE L1 -210 5952 5887 26 30 0 0 chr2 28437509 28437542 -222250312 + AT_rich Low_complexity Low_complexity 1 33 0 2073 126 10 7 chr2 28437661 28437970 -222249884 + AluSx SINE Alu 1 310 -2 200 56 83 0 chr2 28437986 28438022 -222249832 + GA-rich Low_complexity Low_complexity 2 40 0 1135 279 97 29 chr2 28438072 28438729 -222249125 - L1ME3 LINE L1 -259 5903 5380 203 311 81 27 chr2 28438730 28438804 -222249050 - L2 LINE L2 -43 3229 3152 232 143 0 0 chr2 28439249 28439284 -222248570 - MLT1D LTR MaLR -470 35 1 555 329 88 8 chr2 28439851 28440091 -222247763 + MIR SINE MIR 4 262 0 240 149 0 0 chr2 28440206 28440253 -222247601 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1719 167 32 0 chr2 28440331 28440613 -222247241 + AluJo SINE Alu 3 293 -19 270 136 0 0 chr2 28440771 28440815 -222247039 + (TC)n Simple_repeat Simple_repeat 1 44 0 502 264 0 23 chr2 28441972 28442101 -222245753 - MLT1D LTR MaLR -349 156 31 198 0 0 0 chr2 28444534 28444556 -222243298 + (A)n Simple_repeat Simple_repeat 1 22 0 2876 176 36 52 chr2 28445281 28445919 -222241935 - L1ME1 LINE L1 -137 6029 5402 3769 196 32 39 chr2 28445921 28446235 -222241619 - L1ME1 LINE L1 -801 5345 5030 1823 150 59 83 chr2 28446235 28446392 -222241462 + MLT1A1 LTR MaLR 1 160 -205 2168 122 3 0 chr2 28446392 28446680 -222241174 - AluSp SINE Alu -24 289 1 1823 150 59 83 chr2 28446680 28446896 -222240958 + MLT1A1 LTR MaLR 160 365 0 3769 196 32 39 chr2 28446896 28447561 -222240293 - L1ME1 LINE L1 -1116 5030 4373 223 158 0 0 chr2 28447577 28447615 -222240239 - L2 LINE L2 -9 3304 3267 2243 103 3 0 chr2 28447872 28448164 -222239690 - AluSx SINE Alu -17 295 3 2270 99 0 7 chr2 28449119 28449411 -222238443 + AluSx SINE Alu 3 292 -20 318 50 0 0 chr2 28449700 28449740 -222238114 + (CA)n Simple_repeat Simple_repeat 1 40 0 636 138 0 0 chr2 28450173 28450289 -222237565 + (TC)n Simple_repeat Simple_repeat 1 116 0 4221 53 12 0 chr2 28450295 28450787 -222237067 - L1PA5 LINE L1 -5 6149 5652 252 229 145 53 chr2 28452199 28452330 -222235524 - L1MC5 LINE L1 -58 7903 7761 755 118 100 0 chr2 28452446 28452556 -222235298 + FLAM_C SINE Alu 2 122 -21 260 164 15 0 chr2 28452561 28452628 -222235226 + GA-rich Low_complexity Low_complexity 2 69 0 2498 68 0 0 chr2 28452769 28453065 -222234789 - AluY SINE Alu -15 296 1 241 254 99 0 chr2 28453256 28453327 -222234527 + L2 LINE L2 3159 3236 -36 519 148 0 11 chr2 28453623 28453711 -222234143 - AluSg/x SINE Alu -7 302 216 620 278 64 6 chr2 28454481 28454654 -222233200 + MER5A DNA MER1_type 1 183 -6 275 356 24 87 chr2 28457039 28457328 -222230526 + L2 LINE L2 2981 3251 -21 209 152 0 0 chr2 28458055 28458088 -222229766 - L2 LINE L2 -9 3304 3272 2145 97 3 17 chr2 28458476 28458765 -222229089 - AluSc SINE Alu -24 285 1 253 344 11 11 chr2 28458775 28458865 -222228989 + MIR SINE MIR 18 107 -155 350 110 22 44 chr2 28459028 28459119 -222228735 + L1ME LINE L1 5346 5434 -687 580 288 23 104 chr2 28459902 28460336 -222227518 - L2 LINE L2 0 3272 2874 2085 110 13 23 chr2 28460356 28460656 -222227198 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr2 28460736 28460756 -222227098 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1409 191 11 14 chr2 28460758 28461041 -222226813 - AluJo SINE Alu -30 282 1 2104 99 0 11 chr2 28461964 28462267 -222225587 - AluSc SINE Alu 0 300 1 1657 171 11 21 chr2 28462435 28462752 -222225102 - AluJb SINE Alu 0 314 1 2335 108 0 6 chr2 28463144 28463458 -222224396 - AluSx SINE Alu 0 312 1 2319 97 10 0 chr2 28464643 28464942 -222222912 - AluSx SINE Alu -10 302 1 739 269 68 94 chr2 28466373 28466890 -222220964 + L1MC4 LINE L1 7004 7533 -509 1585 174 0 55 chr2 28466890 28467201 -222220653 - AluJo SINE Alu -3 309 16 739 269 68 94 chr2 28467201 28467380 -222220474 + L1MC4 LINE L1 7533 7715 -327 2402 98 0 0 chr2 28467380 28467687 -222220167 + AluSq SINE Alu 1 307 -6 739 269 68 94 chr2 28467687 28468065 -222219789 + L1MC4 LINE L1 7715 8040 -2 2261 103 7 0 chr2 28468295 28468585 -222219269 - AluSg SINE Alu -18 292 1 541 298 22 28 chr2 28469341 28469519 -222218335 - MIR SINE MIR -66 196 20 1372 143 0 52 chr2 28469911 28470141 -222217713 + MER20 DNA MER1_type 1 218 -1 248 368 60 8 chr2 28472120 28472253 -222215601 + MIR3 SINE MIR 13 152 -56 1324 103 0 5 chr2 28473084 28473269 -222214585 - AluSp SINE Alu 0 313 130 348 318 226 0 chr2 28473837 28474054 -222213800 + L3 LINE CR1 1307 1572 -5 436 260 83 30 chr2 28474945 28475114 -222212740 - MIR3 SINE MIR -1 207 30 261 268 268 9 chr2 28475713 28475825 -222212029 - MIR3 SINE MIR -31 177 37 425 289 53 83 chr2 28475867 28475955 -222211899 + MIR SINE MIR 20 109 -153 1933 116 0 96 chr2 28475955 28476290 -222211564 + AluJb SINE Alu 1 303 -9 425 289 53 83 chr2 28476290 28476429 -222211425 + MIR SINE MIR 109 240 -22 451 173 370 25 chr2 28476448 28476610 -222211244 + MER112 DNA MER1_type 4 221 -39 303 287 57 33 chr2 28478448 28478570 -222209284 - L2 LINE L2 -7 3265 3141 2296 108 0 0 chr2 28479631 28479936 -222207918 - AluSx SINE Alu -7 305 1 304 314 103 27 chr2 28480102 28480287 -222207567 + MIR SINE MIR 9 207 -55 1110 212 5 0 chr2 28481494 28481697 -222206157 + MER58A DNA MER1_type 1 204 -20 541 363 0 0 chr2 28482514 28482649 -222205205 - L2 LINE L2 -1 3271 3137 261 0 0 0 chr2 28482876 28482905 -222204949 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2081 125 0 0 chr2 28482907 28483187 -222204667 - AluSx SINE Alu -32 280 1 180 189 176 27 chr2 28484644 28484718 -222203136 - MIR SINE MIR -68 194 110 445 292 159 10 chr2 28485174 28485369 -222202485 + MIR SINE MIR 12 235 -27 22 35 0 0 chr2 28485891 28485920 -222201934 + AT_rich Low_complexity Low_complexity 1 29 0 505 283 7 7 chr2 28487871 28488016 -222199838 - L2 LINE L2 -1 3312 3168 2206 116 0 25 chr2 28488365 28488685 -222199169 - AluSx SINE Alu 0 312 1 2173 142 64 6 chr2 28488723 28489082 -222198772 + MLT1B LTR MaLR 11 390 0 533 256 109 42 chr2 28489341 28489742 -222198112 + LTR33 LTR ERVL 49 513 -8 282 377 43 0 chr2 28489742 28489880 -222197974 - L2 LINE L2 -974 2340 2197 2241 85 0 0 chr2 28490262 28490589 -222197265 + AluSx SINE Alu 2 328 0 591 243 33 13 chr2 28490711 28490863 -222196991 - MIR SINE MIR -48 214 60 21 36 0 0 chr2 28492098 28492126 -222195728 + AT_rich Low_complexity Low_complexity 1 28 0 288 271 0 0 chr2 28492164 28492234 -222195620 + L1ME LINE L1 5563 5632 -489 1678 164 27 24 chr2 28492344 28492642 -222195212 + AluJo SINE Alu 1 299 -13 30 27 0 0 chr2 28492942 28492979 -222194875 + AT_rich Low_complexity Low_complexity 1 37 0 315 237 0 54 chr2 28493920 28494013 -222193841 - L1MC4a LINE L1 -1892 5916 5829 206 330 91 0 chr2 28494229 28494317 -222193537 + L3 LINE CR1 1407 1502 -75 180 0 0 0 chr2 28494913 28494933 -222192921 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 302 0 26 0 chr2 28494937 28494975 -222192879 + (TG)n Simple_repeat Simple_repeat 2 40 0 1867 233 5 16 chr2 28495671 28496049 -222191805 - MLT1A2 LTR MaLR 0 374 1 352 245 0 21 chr2 28497100 28497194 -222190660 - L2 LINE L2 -63 3250 3159 15678 164 23 51 chr2 28497219 28499137 -222188717 + L1MA4A LINE L1 7 1978 -5027 2290 126 0 0 chr2 28499137 28499446 -222188408 + AluSx SINE Alu 1 309 -3 15678 164 23 51 chr2 28499446 28504603 -222183251 + L1MA4A LINE L1 1978 6934 -71 2197 85 0 24 chr2 28504704 28504997 -222182857 - AluY SINE Alu -25 286 1 266 260 68 0 chr2 28505980 28506053 -222181801 + L2 LINE L2 3230 3307 -6 22 0 0 0 chr2 28506453 28506475 -222181379 + AT_rich Low_complexity Low_complexity 1 22 0 2055 119 0 7 chr2 28507290 28507602 -222180252 - AluSx SINE Alu 0 310 1 23 33 0 0 chr2 28507925 28507955 -222179899 + AT_rich Low_complexity Low_complexity 1 30 0 218 325 17 43 chr2 28508841 28508958 -222178896 + C-rich Low_complexity Low_complexity 6 119 0 472 268 142 21 chr2 28510380 28510683 -222177171 - L1ME LINE L1 -504 5617 5255 462 218 10 0 chr2 28511218 28511319 -222176535 - MIR SINE MIR -5 257 156 282 255 50 71 chr2 28511340 28511481 -222176373 + MLT1J2 LTR MaLR 23 160 -290 240 234 0 0 chr2 28511690 28511737 -222176117 + MLT1I LTR MaLR 361 407 -2 2272 108 0 10 chr2 28511751 28512056 -222175798 + AluSc SINE Alu 1 302 -7 375 121 136 0 chr2 28512061 28512127 -222175727 - MIR SINE MIR -101 161 87 436 295 16 16 chr2 28512615 28512744 -222175110 - L2 LINE L2 0 3313 3185 269 210 0 160 chr2 28513077 28513196 -222174658 + MER91A DNA MER1_type 55 154 -42 530 258 18 12 chr2 28513458 28513648 -222174206 - MIR SINE MIR 0 262 7 1618 127 57 96 chr2 28513753 28513915 -222173939 + AluJo SINE Alu 1 147 -165 189 107 0 0 chr2 28513915 28513943 -222173911 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1618 127 57 96 chr2 28513943 28514094 -222173760 + AluJo SINE Alu 147 302 -10 196 167 28 0 chr2 28514126 28514162 -222173692 + L2 LINE L2 3262 3298 -15 1571 160 4 0 chr2 28514492 28514736 -222173118 - AluJo SINE Alu -67 245 1 316 240 34 23 chr2 28515095 28515203 -222172651 - MIR SINE MIR -92 116 11 2151 123 7 0 chr2 28517752 28518053 -222169801 + AluSx SINE Alu 1 303 -9 285 235 12 37 chr2 28518167 28518248 -222169606 + MIR SINE MIR 111 189 -73 1212 176 5 23 chr2 28518745 28518961 -222168893 - AluJb SINE Alu -14 298 87 218 246 16 16 chr2 28518986 28519047 -222168807 + L2 LINE L2 3203 3263 -9 314 277 36 27 chr2 28519087 28519199 -222168655 - MIR SINE MIR -51 211 99 207 100 0 0 chr2 28520323 28520353 -222167501 + (A)n Simple_repeat Simple_repeat 1 30 0 2143 104 3 0 chr2 28521431 28521720 -222166134 - AluSx SINE Alu -22 290 1 273 172 40 101 chr2 28521813 28521912 -222165942 - HAL1 LINE L1 -2 2505 2413 244 350 150 0 chr2 28522083 28522203 -222165651 - L2 LINE L2 -8 3264 3127 414 375 112 13 chr2 28522269 28522932 -222164922 - L2 LINE L2 -251 3021 2291 2375 72 7 13 chr2 28523976 28524282 -222163572 - AluSp SINE Alu -8 305 2 1853 159 10 10 chr2 28524378 28524674 -222163180 - AluJo SINE Alu -16 296 1 273 339 115 15 chr2 28525997 28526127 -222161727 + MIR3 SINE MIR 8 150 -58 197 256 23 0 chr2 28526955 28526998 -222160856 + MIR SINE MIR 213 256 -6 2293 96 3 3 chr2 28527033 28527334 -222160520 + AluSg SINE Alu 1 301 -9 204 97 0 0 chr2 28527856 28527887 -222159967 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2695 157 55 21 chr2 28529582 28530111 -222157743 + L1MA9 LINE L1 5729 6275 -37 475 238 105 7 chr2 28530215 28530358 -222157496 - MIR SINE MIR -19 243 87 516 285 150 10 chr2 28530472 28530679 -222157175 + MIR SINE MIR 10 245 -17 448 256 17 8 chr2 28531272 28531389 -222156465 - MIR SINE MIR -126 136 19 490 264 60 22 chr2 28531442 28531624 -222156230 + MER5A DNA MER1_type 1 189 0 998 199 46 51 chr2 28532004 28532044 -222155810 - L1P LINE L1 -764 5391 5352 3200 155 11 9 chr2 28532044 28532573 -222155281 - L1MB8 LINE L1 0 6178 5649 998 199 46 51 chr2 28532573 28532796 -222155058 - L1P LINE L1 -803 5352 5132 238 270 95 7 chr2 28532967 28533104 -222154750 + L1M LINE L1 5255 5403 -956 2558 51 0 0 chr2 28533961 28534256 -222153598 - AluY SINE Alu -16 295 1 395 325 52 7 chr2 28534316 28534470 -222153384 - MER20B DNA MER1_type -616 167 7 189 354 43 26 chr2 28535983 28536135 -222151719 - MIR SINE MIR -100 108 4 488 298 42 50 chr2 28536550 28536788 -222151066 - MIR SINE MIR -6 256 21 346 291 47 68 chr2 28537170 28537318 -222150536 + MIR3 SINE MIR 20 164 -44 1948 123 11 18 chr2 28537774 28538087 -222149767 + AluSq SINE Alu 1 311 0 327 323 37 63 chr2 28538840 28538943 -222148911 - MIR SINE MIR -4 258 161 14862 110 36 1 chr2 28538943 28541785 -222146069 + L1PA10 LINE L1 3284 6168 0 327 323 37 63 chr2 28541785 28541870 -222145984 - MIR SINE MIR -101 161 75 217 321 179 14 chr2 28541896 28542036 -222145818 - MIR3 SINE MIR -43 165 3 620 282 97 9 chr2 28542573 28542789 -222145065 - MIR SINE MIR -1 261 27 2443 82 0 19 chr2 28544620 28544938 -222142916 - AluSx SINE Alu 0 312 1 240 313 96 9 chr2 28545833 28545948 -222141906 + MIR SINE MIR 84 208 -54 4943 199 153 102 chr2 28546239 28546509 -222141345 - L1ME2 LINE L1 0 6233 5978 2095 121 3 0 chr2 28546509 28546806 -222141048 + AluSx SINE Alu 1 298 -14 4943 199 153 102 chr2 28546806 28547394 -222140460 - L1ME2 LINE L1 -255 5978 5422 773 163 0 64 chr2 28547394 28547535 -222140319 - FLAM_C SINE Alu -1 132 1 4943 199 153 102 chr2 28547535 28548252 -222139602 - L1ME2 LINE L1 -811 5422 4743 1097 172 0 0 chr2 28548252 28548421 -222139433 - AluSg/x SINE Alu -10 302 134 2124 133 0 0 chr2 28548421 28548721 -222139133 - AluSq SINE Alu -5 308 9 4943 199 153 102 chr2 28548721 28548948 -222138906 - L1ME2 LINE L1 -1490 4743 4529 1948 127 3 21 chr2 28548948 28549239 -222138615 - AluSx SINE Alu -10 302 17 766 153 0 0 chr2 28549239 28549350 -222138504 - AluJb SINE Alu -200 112 2 4943 199 153 102 chr2 28549350 28551057 -222136797 - L1ME2 LINE L1 -1704 4529 2911 2371 96 0 10 chr2 28551057 28551369 -222136485 - AluSg SINE Alu -1 309 1 2462 103 0 0 chr2 28551369 28551680 -222136174 - AluSx SINE Alu -1 311 1 4943 199 153 102 chr2 28551680 28552141 -222135713 - L1ME2 LINE L1 -3321 2912 1810 310 262 35 19 chr2 28552398 28552523 -222135331 - MIR SINE MIR -62 146 43 611 250 67 12 chr2 28553138 28553302 -222134552 + MIR SINE MIR 20 192 -70 1408 233 51 28 chr2 28553303 28553698 -222134156 - MLT1E3 LTR MaLR 0 624 221 433 186 280 8 chr2 28553745 28553863 -222133991 - MLT1E3 LTR MaLR -503 151 2 2302 108 0 0 chr2 28554975 28555280 -222132574 + AluSx SINE Alu 1 305 -7 2573 63 0 0 chr2 28555353 28555656 -222132198 + AluY SINE Alu 1 303 -8 391 320 16 0 chr2 28555930 28556052 -222131802 + MIR SINE MIR 16 139 -69 1892 133 59 14 chr2 28606062 28606348 -222081506 - AluJb SINE Alu -13 299 1 2359 99 0 16 chr2 28607352 28607700 -222080154 + AluSq SINE Alu 1 313 0 180 321 54 54 chr2 28607778 28607890 -222079964 + L2 LINE L2 3192 3303 -10 356 363 18 23 chr2 28608582 28608753 -222079101 - L1 LINE L1 -2316 3830 3661 242 313 133 5 chr2 28608870 28609065 -222078789 - L2 LINE L2 -2411 903 684 2322 117 3 0 chr2 28609194 28609521 -222078333 - AluSx SINE Alu 0 328 1 245 169 113 28 chr2 28609790 28609861 -222077993 + MIR SINE MIR 184 260 -2 286 276 112 17 chr2 28610226 28610342 -222077512 + MIR SINE MIR 24 150 -58 581 283 130 24 chr2 28610840 28611178 -222076676 + LTR16A LTR ERVL 1 362 -88 833 126 0 44 chr2 28611396 28611531 -222076323 - FLAM_C SINE Alu -14 129 1 434 248 48 67 chr2 28611570 28611780 -222076074 - MLT1K LTR MaLR -6 582 377 239 50 0 25 chr2 28612177 28612217 -222075637 - L1MB5 LINE L1 -9 6165 6127 742 141 0 8 chr2 28612231 28612352 -222075502 + AluJb SINE Alu 14 133 -179 1370 174 16 4 chr2 28612358 28612611 -222075243 - L1MB5 LINE L1 -33 6141 5886 1865 153 3 17 chr2 28612755 28613049 -222074805 - AluJb SINE Alu -4 308 19 381 295 71 86 chr2 28613699 28613909 -222073945 - MIR SINE MIR -37 225 19 214 339 26 0 chr2 28613922 28614037 -222073817 - L2 LINE L2 -233 3039 2922 4158 227 41 18 chr2 28614781 28615870 -222071984 - L1MC4 LINE L1 -141 7901 6788 6865 51 0 1 chr2 28615886 28616756 -222071098 - L1PA5 LINE L1 -8 6146 5278 320 176 40 14 chr2 28616750 28616824 -222071030 - L1MC4a LINE L1 -1085 6723 6648 * 479 188 0 0 chr2 28617064 28617149 -222070705 - AluJo SINE Alu -111 201 117 277 280 97 17 chr2 28617766 28617941 -222069913 - MIR SINE MIR -54 208 20 379 283 42 17 chr2 28618050 28618170 -222069684 + MIR SINE MIR 23 145 -63 2569 176 81 31 chr2 28619262 28620048 -222067806 - L1ME2 LINE L1 -168 5996 5170 315 167 32 32 chr2 28620050 28620112 -222067742 + Alu SINE Alu 1 48 -255 255 284 181 13 chr2 28621116 28621271 -222066583 - MIR SINE MIR -39 223 43 622 160 10 0 chr2 28621383 28621483 -222066371 - AluSp/q SINE Alu -18 295 195 292 219 94 10 chr2 28622034 28622130 -222065724 + L2 LINE L2 3168 3271 -1 295 218 42 99 chr2 28622267 28622409 -222065445 - L2 LINE L2 -452 2862 2729 248 293 83 68 chr2 28622664 28622869 -222064985 - L2 LINE L2 -362 2952 2745 682 185 0 13 chr2 28623794 28623951 -222063903 + CT-rich Low_complexity Low_complexity 2 156 0 248 196 18 0 chr2 28624112 28624168 -222063686 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 281 202 112 34 chr2 28625355 28625444 -222062410 + L2 LINE L2 3217 3312 -1 1471 187 79 0 chr2 28625476 28625743 -222062111 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 28625745 28625766 -222062088 + AT_rich Low_complexity Low_complexity 1 21 0 343 215 93 19 chr2 28626814 28626921 -222060933 + MIR SINE MIR 69 183 -79 22 0 0 0 chr2 28628626 28628648 -222059206 + AT_rich Low_complexity Low_complexity 1 22 0 2495 103 0 0 chr2 28628741 28629052 -222058802 + AluSx SINE Alu 1 311 -1 997 154 43 0 chr2 28629128 28629316 -222058538 - L1MB2 LINE L1 -1 6170 5975 225 65 0 0 chr2 28629335 28629366 -222058488 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1217 116 0 45 chr2 28629476 28629674 -222058180 + AluSc SINE Alu 115 303 -6 372 119 45 15 chr2 28629772 28629839 -222058015 - LTR42 LTR ERVL -65 430 362 * 1556 146 4 8 chr2 28629832 28630086 -222057768 - LTR42 LTR ERVL -242 253 1 2248 133 33 25 chr2 28630128 28630489 -222057365 - THE1B LTR MaLR 0 364 1 1806 170 12 3 chr2 28630646 28630976 -222056878 - L1MB3 LINE L1 -8 6175 5843 1719 169 6 48 chr2 28630976 28631134 -222056720 + AluJb SINE Alu 2 142 -170 1490 146 120 81 chr2 28631134 28631566 -222056288 - LTR7 LTR ERV1 0 450 2 1719 169 6 48 chr2 28631566 28631720 -222056134 + AluJb SINE Alu 142 301 -11 3401 193 13 7 chr2 28631720 28632906 -222054948 - L1MB3 LINE L1 -326 5857 4667 634 144 10 0 chr2 28632929 28633026 -222054828 + AluSg/x SINE Alu 78 175 -135 1813 286 85 11 chr2 28633126 28633776 -222054078 + L2 LINE L2 1665 2362 -952 3210 249 56 47 chr2 28633781 28634343 -222053511 + L1ME LINE L1 6 561 -5519 1420 166 68 64 chr2 28634343 28634639 -222053215 + AluJo SINE Alu 1 297 -15 3210 249 56 47 chr2 28634639 28635688 -222052166 + L1ME LINE L1 561 1640 -4440 493 223 108 135 chr2 28635693 28635989 -222051865 + L2 LINE L2 2353 2640 -674 207 0 0 0 chr2 28635991 28636014 -222051840 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 486 151 269 0 chr2 28636014 28636107 -222051747 - FLAM_C SINE Alu -24 119 2 921 281 76 14 chr2 28636108 28636576 -222051278 + L2 LINE L2 2632 3143 -170 636 141 29 129 chr2 28636616 28636786 -222051068 - FAM SINE Alu -13 172 20 2095 115 7 3 chr2 28636792 28637078 -222050776 - AluSx SINE Alu -25 287 1 238 169 145 24 chr2 28637109 28637192 -222050662 + LTR56 LTR ERV1 1 93 -352 803 142 83 100 chr2 28637608 28637848 -222050006 + LTR56 LTR ERV1 85 320 -125 556 214 0 15 chr2 28637974 28638105 -222049749 + L1MC4 LINE L1 7912 8040 -2 231 339 31 16 chr2 28638258 28638385 -222049469 + L2 LINE L2 1317 1445 -1869 219 238 0 0 chr2 28639451 28639493 -222048361 + MIR SINE MIR 109 150 -112 369 301 90 15 chr2 28639623 28639756 -222048098 - MIR SINE MIR -47 215 73 345 197 28 0 chr2 28640295 28640366 -222047488 - MIR SINE MIR -101 161 89 276 236 182 18 chr2 28640685 28640795 -222047059 + MIR3 SINE MIR 65 192 -16 210 324 29 9 chr2 28640927 28641032 -222046822 + MIR SINE MIR 35 141 -67 1077 174 5 20 chr2 28641464 28641660 -222046194 + AluSp SINE Alu 117 309 -4 732 233 36 26 chr2 28641927 28642120 -222045734 - MER89-int LTR ERV1 -6148 653 459 2237 103 10 3 chr2 28642251 28642541 -222045313 + AluSq SINE Alu 1 292 -21 186 43 0 0 chr2 28642548 28642571 -222045283 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1840 168 13 3 chr2 28642719 28643028 -222044826 + AluJb SINE Alu 1 312 0 273 278 33 61 chr2 28643197 28643377 -222044477 - MER89 LTR ERV1 -20 539 365 870 284 209 46 chr2 28643918 28644044 -222043810 - L2 LINE L2 0 3272 3168 220 0 0 79 chr2 28644044 28644082 -222043772 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2054 117 7 0 chr2 28644092 28644365 -222043489 - AluJo SINE Alu -36 276 2 870 284 209 46 chr2 28644365 28645470 -222042384 - L2 LINE L2 -111 3161 1842 218 333 73 10 chr2 28645863 28645959 -222041895 + MIR SINE MIR 16 117 -145 1206 139 0 0 chr2 28646130 28646295 -222041559 + AluJb SINE Alu 5 169 -143 226 284 0 40 chr2 28646777 28646851 -222041003 + MIR3 SINE MIR 104 174 -34 245 264 44 55 chr2 28647379 28647470 -222040384 + MIR SINE MIR 168 257 -5 200 309 79 24 chr2 28647906 28648032 -222039822 - MIR3 SINE MIR -67 141 9 958 212 6 17 chr2 28648289 28648468 -222039386 + MER5B DNA MER1_type 1 177 -1 530 274 16 0 chr2 28648697 28648821 -222039033 - L2 LINE L2 0 3313 3188 202 293 0 37 chr2 28649206 28649288 -222038566 - L2 LINE L2 0 3272 3194 959 214 0 0 chr2 28649716 28649889 -222037965 + FAM SINE Alu 1 173 -12 423 239 74 25 chr2 28650159 28650322 -222037532 + MER112 DNA MER1_type 79 249 -11 1824 102 40 7 chr2 28650432 28650731 -222037123 - AluY SINE Alu 0 308 1 777 147 0 39 chr2 28651061 28651190 -222036664 + FLAM_C SINE Alu 2 125 -18 1691 154 42 11 chr2 28652061 28652347 -222035507 - AluJo SINE Alu -17 295 1 400 295 28 13 chr2 28652973 28653144 -222034710 - MIR SINE MIR -59 203 35 2263 80 0 26 chr2 28653837 28654149 -222033705 - AluSx SINE Alu -8 304 1 638 180 0 41 chr2 28654223 28654345 -222033509 + MER63 DNA MER1_type 40 782 -54 474 275 94 0 chr2 28654401 28654550 -222033304 + MIR SINE MIR 100 262 0 343 294 25 34 chr2 28655245 28655364 -222032490 - MIR SINE MIR -70 192 75 210 303 0 15 chr2 28655378 28655444 -222032410 + CT-rich Low_complexity Low_complexity 2 66 0 29 0 0 0 chr2 28655804 28655833 -222032021 + AT_rich Low_complexity Low_complexity 1 29 0 207 255 0 0 chr2 28656991 28657038 -222030816 + (CACG)n Simple_repeat Simple_repeat 1 47 0 1525 195 3 10 chr2 28658706 28658998 -222028856 + AluJo SINE Alu 1 290 -22 357 271 19 77 chr2 28660406 28660561 -222027293 - MIR3 SINE MIR -21 187 42 352 264 118 0 chr2 28661105 28661215 -222026639 + MIR3 SINE MIR 38 160 -48 296 310 21 56 chr2 28661225 28661367 -222026487 + MER5B DNA MER1_type 22 158 -20 504 160 0 0 chr2 28661699 28661774 -222026080 - AluS SINE Alu -235 77 3 1038 241 34 15 chr2 28661781 28662043 -222025811 - L1M4 LINE L1 -1159 4987 4721 1898 157 7 0 chr2 28662078 28662384 -222025470 - AluJo SINE Alu -4 308 1 211 68 0 45 chr2 28663879 28663923 -222023931 + (CA)n Simple_repeat Simple_repeat 2 43 0 447 19 0 0 chr2 28664522 28664574 -222023280 + (TG)n Simple_repeat Simple_repeat 2 53 0 1834 146 0 0 chr2 28664720 28665000 -222022854 + AluJo SINE Alu 5 284 -28 366 298 43 22 chr2 28665073 28665207 -222022647 - MIR SINE MIR -62 146 30 317 298 10 19 chr2 28665786 28665890 -222021964 - MIR SINE MIR -109 153 51 1897 180 24 18 chr2 28666048 28666431 -222021423 + MLT1B LTR MaLR 6 390 0 204 240 20 0 chr2 28666459 28666509 -222021345 + L2 LINE L2 3262 3312 -1 217 280 43 21 chr2 28667348 28667441 -222020413 + MIR SINE MIR 39 133 -129 251 246 39 101 chr2 28667756 28667935 -222019919 + L2 LINE L2 2887 3054 -218 223 146 49 0 chr2 28667952 28667993 -222019861 + (TCTG)n Simple_repeat Simple_repeat 3 45 0 240 313 148 0 chr2 28668059 28668174 -222019680 + L2 LINE L2 3137 3268 -4 279 241 81 23 chr2 28668582 28668669 -222019185 + L2 LINE L2 3159 3250 -22 499 196 47 0 chr2 28668672 28668779 -222019075 + MER94 DNA DNA 2 113 -21 267 103 0 0 chr2 28668790 28668829 -222019025 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 477 317 80 15 chr2 28669063 28669262 -222018592 - MIR SINE MIR -33 229 18 239 337 20 0 chr2 28670232 28670333 -222017521 + MER94 DNA DNA 6 108 -26 255 170 0 0 chr2 28671359 28671406 -222016448 + (TG)n Simple_repeat Simple_repeat 1 47 0 777 231 20 45 chr2 28671950 28672149 -222015705 + MIR SINE MIR 19 212 -50 446 262 41 0 chr2 28672269 28672391 -222015463 - L2 LINE L2 -6 3307 3181 4301 178 71 6 chr2 28672523 28673299 -222014555 + LTR1B LTR ERV1 1 826 0 365 238 0 12 chr2 28673392 28673472 -222014382 - MIR SINE MIR -118 144 66 544 280 192 12 chr2 28673475 28673725 -222014129 - L2 LINE L2 -4 3309 3015 2342 169 42 6 chr2 28673941 28674441 -222013413 - L1MC1 LINE L1 0 6333 5772 1971 152 19 36 chr2 28674441 28674802 -222013052 + THE1A LTR MaLR 1 355 0 2342 169 42 6 chr2 28674802 28674851 -222013003 - L1MC1 LINE L1 -561 5772 5726 1527 171 42 9 chr2 28675446 28675746 -222012108 + L1MB3 LINE L1 5749 6037 -146 2385 89 27 0 chr2 28675746 28676069 -222011785 + L1PA13 LINE L1 5819 6163 0 735 161 42 7 chr2 28676069 28676197 -222011657 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 28676203 28676316 -222011538 - LTR23 LTR ERV1 -23 414 295 416 65 0 0 chr2 28676317 28676379 -222011475 - Alu SINE Alu -2 308 247 1268 84 39 0 chr2 28676379 28676558 -222011296 + L1PA13 LINE L1 5978 6163 0 735 161 42 7 chr2 28676558 28676686 -222011168 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 28676692 28676805 -222011049 - LTR23 LTR ERV1 -23 414 295 700 93 0 0 chr2 28676806 28676903 -222010951 - AluSg/x SINE Alu -2 307 211 316 290 30 0 chr2 28677031 28677131 -222010723 - MIR3 SINE MIR -45 163 61 543 250 181 0 chr2 28678063 28678223 -222009631 - MIR SINE MIR -25 237 49 323 298 19 0 chr2 28679091 28679195 -222008659 + L2 LINE L2 2958 3063 -209 1907 203 78 50 chr2 28679591 28680075 -222007779 + MLT1D LTR MaLR 8 505 0 443 287 144 33 chr2 28680114 28680172 -222007682 - MIR SINE MIR -2 260 210 1888 188 28 38 chr2 28680172 28680566 -222007288 - MLT1B LTR MaLR 0 390 1 443 287 144 33 chr2 28680566 28680688 -222007166 - MIR SINE MIR -52 210 60 272 153 3 43 chr2 28680688 28680757 -222007097 - L1P LINE L1 -792 5354 5284 477 50 0 0 chr2 28681612 28681672 -222006182 + (CA)n Simple_repeat Simple_repeat 2 61 0 467 243 0 28 chr2 28681896 28682003 -222005851 - L3 LINE CR1 -59 1518 1415 311 254 136 27 chr2 28682458 28682568 -222005286 + MIR SINE MIR 70 191 -71 207 143 0 0 chr2 28683147 28683182 -222004672 - MIR3 SINE MIR -46 162 128 183 129 0 0 chr2 28685726 28685757 -222002097 + (CAGGG)n Simple_repeat Simple_repeat 4 34 0 570 333 35 53 chr2 28687516 28687589 -222000265 - L3 LINE CR1 -20 1557 1484 1497 218 128 37 chr2 28687589 28688048 -221999806 - MLT1D LTR MaLR -4 501 1 570 333 35 53 chr2 28688048 28688256 -221999598 - L3 LINE CR1 -93 1484 1281 473 186 103 0 chr2 28688458 28688555 -221999299 - MER103 DNA DNA -49 117 11 423 0 0 0 chr2 28689067 28689114 -221998740 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 276 293 9 chr2 28689530 28689646 -221998208 - MIR SINE MIR -14 248 100 590 294 0 12 chr2 28690236 28690406 -221997448 + MIR3 SINE MIR 36 203 -5 181 262 0 0 chr2 28690619 28690661 -221997193 - MIR SINE MIR -65 197 156 492 324 14 12 chr2 28690818 28690990 -221996864 - MIR SINE MIR -69 139 16 265 231 78 24 chr2 28691023 28691138 -221996716 - MIR SINE MIR -72 136 18 232 250 0 0 chr2 28691176 28691228 -221996626 + CT-rich Low_complexity Low_complexity 1 52 0 663 54 0 0 chr2 28691938 28692030 -221995824 + (TG)n Simple_repeat Simple_repeat 2 93 0 693 247 68 54 chr2 28692053 28692282 -221995572 - L1ME3A LINE L1 -10 6160 5925 2172 82 7 7 chr2 28692282 28692574 -221995280 + AluSg SINE Alu 1 292 -18 693 247 68 54 chr2 28692574 28692640 -221995214 - L1ME3A LINE L1 -245 5925 5861 304 300 9 27 chr2 28692646 28692756 -221995098 - L1MC4 LINE L1 -1330 6712 6605 333 286 10 31 chr2 28692804 28693000 -221994854 - L1MC5 LINE L1 -178 7783 7592 333 340 20 50 chr2 28693237 28693437 -221994417 - L3 LINE CR1 -171 1406 1213 2432 81 0 0 chr2 28693860 28694169 -221993685 + AluSg SINE Alu 1 309 -1 738 300 27 9 chr2 28694213 28694436 -221993418 - MLT1K LTR MaLR -11 577 351 713 239 58 66 chr2 28694467 28694710 -221993144 - MLT1K LTR MaLR -305 283 43 754 227 52 35 chr2 28694738 28694967 -221992887 + MIR SINE MIR 29 261 -1 261 313 27 53 chr2 28695400 28695550 -221992304 - MIR3 SINE MIR -47 161 16 210 194 56 42 chr2 28696792 28696864 -221990990 + CT-rich Low_complexity Low_complexity 5 77 0 299 314 141 6 chr2 28697102 28697258 -221990596 + MIR SINE MIR 72 248 -14 27 62 0 0 chr2 28697728 28697776 -221990078 + GC_rich Low_complexity Low_complexity 1 48 0 247 219 164 0 chr2 28698607 28698680 -221989174 - MIR SINE MIR -55 153 69 186 319 55 22 chr2 28698691 28698782 -221989072 - MIR SINE MIR -59 203 110 507 254 98 23 chr2 28698870 28699043 -221988811 - MIR3 SINE MIR -22 186 1 21 0 0 0 chr2 28699149 28699170 -221988684 + AT_rich Low_complexity Low_complexity 1 21 0 27 92 0 0 chr2 28699385 28699461 -221988393 + GC_rich Low_complexity Low_complexity 1 76 0 231 172 17 17 chr2 28700119 28700177 -221987677 + CT-rich Low_complexity Low_complexity 2 59 0 195 100 0 0 chr2 28700310 28700340 -221987514 + (CGAG)n Simple_repeat Simple_repeat 1 30 0 261 83 0 0 chr2 28700355 28700391 -221987463 + (GA)n Simple_repeat Simple_repeat 2 37 0 441 0 0 0 chr2 28703788 28703837 -221984017 + (CA)n Simple_repeat Simple_repeat 2 50 0 342 24 0 0 chr2 28704178 28704220 -221983634 + L1PA6 LINE L1 6106 6147 -7 738 268 33 47 chr2 28704644 28704920 -221982934 - MARNA DNA Mariner -49 537 266 914 213 137 0 chr2 28706743 28706940 -221980914 + MER58A DNA MER1_type 1 224 0 183 80 0 0 chr2 28708114 28708139 -221979715 + (ATGGTG)n Simple_repeat Simple_repeat 6 30 0 585 276 5 43 chr2 28708157 28708342 -221979512 + MER5B DNA MER1_type 1 178 0 225 312 172 6 chr2 28708363 28708520 -221979334 - MIR SINE MIR -57 205 23 658 298 78 8 chr2 28709725 28709967 -221977887 + MIR SINE MIR 4 262 0 248 297 0 0 chr2 28711505 28711579 -221976275 + MIR SINE MIR 77 150 -112 282 304 108 57 chr2 28712147 28712341 -221975513 - MIR3 SINE MIR 0 208 5 2253 104 0 19 chr2 28713010 28713327 -221974527 - AluSx SINE Alu -1 311 1 593 271 6 57 chr2 28713384 28713561 -221974293 - MIR3 SINE MIR -32 176 9 225 331 58 61 chr2 28714151 28714462 -221973392 + L2 LINE L2 2963 3272 0 189 206 132 44 chr2 28714629 28714697 -221973157 - MIR3 SINE MIR -29 179 106 5666 82 113 95 chr2 28714697 28716172 -221971682 + pTR5 LTR ERV1 753 2438 0 1619 147 23 37 chr2 28716185 28716484 -221971370 + AluJo SINE Alu 1 295 -17 25 0 0 0 chr2 28716550 28716575 -221971279 + AT_rich Low_complexity Low_complexity 1 25 0 265 291 189 50 chr2 28716584 28717045 -221970809 + L2 LINE L2 1929 2453 -861 613 111 0 0 chr2 28717101 28717191 -221970663 - LTR12 LTR ERV1 0 714 625 364 206 76 92 chr2 28717191 28717322 -221970532 - LTR30 LTR ERV1 -71 723 544 718 173 129 7 chr2 28717443 28717582 -221970272 - LTR12 LTR ERV1 -549 165 10 215 236 85 38 chr2 28717582 28717688 -221970166 + L2 LINE L2 2551 2661 -653 247 329 0 24 chr2 28718418 28718503 -221969351 + L2 LINE L2 3187 3269 -3 252 305 76 34 chr2 28718696 28718814 -221969040 + L2 LINE L2 3191 3313 0 2262 101 0 0 chr2 28720511 28720818 -221967036 - AluSq SINE Alu -6 307 1 192 380 0 0 chr2 28721506 28721619 -221966235 + MIR3 SINE MIR 78 190 -18 2142 112 3 7 chr2 28721644 28721949 -221965905 + AluSx SINE Alu 1 304 -8 379 291 39 0 chr2 28721985 28722088 -221965766 - L2 LINE L2 -8 3305 3199 726 292 18 9 chr2 28722251 28722470 -221965384 + MIR SINE MIR 21 241 -21 232 118 0 0 chr2 28726470 28726504 -221961350 - L2 LINE L2 -29 3284 3251 25 0 0 0 chr2 28727133 28727158 -221960696 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 28727243 28727266 -221960588 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 28727728 28727749 -221960105 + (T)n Simple_repeat Simple_repeat 1 21 0 188 35 35 0 chr2 28727878 28727907 -221959947 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1781 188 0 0 chr2 28728849 28729152 -221958702 - AluJb SINE Alu -9 303 1 396 305 14 31 chr2 28729205 28729381 -221958473 + MIR SINE MIR 20 198 -64 30 0 0 0 chr2 28729410 28729440 -221958414 + AT_rich Low_complexity Low_complexity 1 30 0 2186 119 0 0 chr2 28729479 28729789 -221958065 - AluSx SINE Alu -2 310 1 2237 101 0 16 chr2 28731014 28731332 -221956522 - AluSq SINE Alu 0 313 1 1368 149 16 29 chr2 28731877 28732119 -221955735 - L1MB5 LINE L1 -9 6165 5927 2119 129 3 0 chr2 28732337 28732648 -221955206 - AluSx SINE Alu 0 312 1 195 232 29 29 chr2 28732892 28732961 -221954893 - L2 LINE L2 -4 3309 3241 182 231 77 15 chr2 28733029 28733094 -221954760 - L2 LINE L2 -59 3254 3186 1881 156 0 7 chr2 28733220 28733527 -221954327 + AluJb SINE Alu 1 305 -7 293 282 29 19 chr2 28733703 28733806 -221954048 - L2 LINE L2 -2 3311 3208 425 334 168 20 chr2 28734402 28734998 -221952856 + L2 LINE L2 1328 2011 -1303 195 316 125 20 chr2 28735021 28735173 -221952681 + L2 LINE L2 2461 2628 -686 1780 169 3 0 chr2 28735561 28735862 -221951992 + AluJo SINE Alu 1 302 -10 1879 173 5 40 chr2 28735863 28736238 -221951616 + L1MC1 LINE L1 5526 5887 -446 1269 175 0 9 chr2 28736238 28736445 -221951409 + L1MC1 LINE L1 6118 6332 -1 1324 149 8 25 chr2 28736449 28736684 -221951170 + AluJb SINE Alu 77 307 -5 199 289 11 67 chr2 28736769 28736859 -221950995 - MIR3 SINE MIR -49 159 75 225 256 103 0 chr2 28736900 28736978 -221950876 + MIR SINE MIR 107 192 -70 620 247 86 6 chr2 28737429 28737591 -221950263 + MIR SINE MIR 23 197 -65 833 162 14 7 chr2 28737699 28737847 -221950007 - AluJo SINE Alu -163 149 1 23 0 0 0 chr2 28737854 28737877 -221949977 + AT_rich Low_complexity Low_complexity 1 23 0 204 239 0 0 chr2 28738699 28738745 -221949109 - L2 LINE L2 0 3272 3227 184 327 0 0 chr2 28738784 28738836 -221949018 - L2 LINE L2 0 3272 3221 565 283 151 4 chr2 28739124 28739382 -221948472 - L2 LINE L2 -22 3291 2996 2056 119 0 3 chr2 28740180 28740508 -221947346 - AluSx SINE Alu 0 312 4 255 103 0 0 chr2 28741593 28741632 -221946222 + (TCC)n Simple_repeat Simple_repeat 1 39 0 204 246 154 18 chr2 28742047 28742157 -221945697 + MIR3 SINE MIR 3 127 -81 760 222 153 24 chr2 28742838 28742894 -221944960 + MER46C DNA MER2_type 4 51 -287 2365 72 0 3 chr2 28742894 28743199 -221944655 - AluSg SINE Alu -6 304 1 760 222 153 24 chr2 28743199 28743430 -221944424 + MER46C DNA MER2_type 51 328 -10 503 270 176 18 chr2 28743437 28743659 -221944195 - MIR SINE MIR -2 260 4 288 200 53 13 chr2 28743659 28743731 -221944123 - MIR SINE MIR -73 135 61 180 323 195 22 chr2 28744277 28744503 -221943351 - L2 LINE L2 -3 3269 3005 1915 102 30 49 chr2 28744923 28745227 -221942627 - AluSx SINE Alu -14 298 1 2145 175 28 28 chr2 28745247 28745619 -221942235 + L1PA16 LINE L1 5767 6141 -25 2109 91 3 36 chr2 28745619 28745926 -221941928 - AluSx SINE Alu -15 297 1 2145 175 28 28 chr2 28745926 28745953 -221941901 + L1PA16 LINE L1 6140 6166 0 266 282 70 50 chr2 28745983 28746128 -221941726 + L1MC5 LINE L1 7676 7829 -132 1987 154 0 0 chr2 28746128 28746433 -221941421 + AluJo SINE Alu 1 305 -7 266 282 70 50 chr2 28746433 28746528 -221941326 + L1MC5 LINE L1 7829 7921 -40 259 313 62 16 chr2 28746769 28746961 -221940893 + L2 LINE L2 2467 2667 -647 189 364 56 19 chr2 28748617 28748779 -221939075 + L2 LINE L2 2851 3018 -254 432 253 95 32 chr2 28748872 28749030 -221938824 + MIR SINE MIR 9 176 -86 2164 104 7 0 chr2 28749051 28749350 -221938504 - AluY SINE Alu -10 301 1 2071 86 79 0 chr2 28749350 28749629 -221938225 - AluSq SINE Alu -8 305 5 264 356 37 21 chr2 28750245 28750436 -221937418 + MIR SINE MIR 35 228 -34 226 324 124 28 chr2 28752323 28752468 -221935386 - MIR3 SINE MIR -9 199 41 364 318 9 0 chr2 28752952 28753062 -221934792 + MIR3 SINE MIR 76 187 -21 1828 173 7 0 chr2 28753226 28753526 -221934328 + AluJo SINE Alu 1 302 -10 753 265 146 0 chr2 28753842 28754061 -221933793 + MIR SINE MIR 2 252 -10 285 29 0 0 chr2 28754062 28754096 -221933758 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 441 326 83 38 chr2 28756205 28756518 -221931336 + MLT1K LTR MaLR 10 336 -252 1774 242 35 24 chr2 28756528 28756990 -221930864 + MLT1C LTR MaLR 1 467 0 2074 137 0 3 chr2 28808632 28808952 -221878902 + AluSx SINE Alu 1 319 0 2313 110 0 0 chr2 28809594 28809893 -221877961 + AluSx SINE Alu 1 299 -13 271 311 133 39 chr2 28810116 28810296 -221877558 + MIR SINE MIR 46 242 -20 195 294 88 15 chr2 28811440 28811508 -221876346 + MIR SINE MIR 46 118 -144 261 296 63 35 chr2 28813209 28813351 -221874503 + MIR SINE MIR 4 141 -67 250 346 68 6 chr2 28814413 28814575 -221873279 + L3b LINE CR1 1313 1484 -99 1903 166 3 10 chr2 28814665 28814973 -221872881 + AluJb SINE Alu 5 310 -2 757 213 13 0 chr2 28816368 28816518 -221871336 - MER5A DNA MER1_type -2 187 36 1578 72 0 10 chr2 28817149 28817344 -221870510 - AluSc SINE Alu -1 308 116 2257 115 0 10 chr2 28817915 28818220 -221869634 - AluSx SINE Alu -10 302 1 2141 118 0 41 chr2 28818270 28818584 -221869270 - AluSg SINE Alu -9 301 1 695 306 46 0 chr2 28819371 28819587 -221868267 + MIR SINE MIR 37 262 0 183 289 0 0 chr2 28819607 28819652 -221868202 - L2 LINE L2 0 3272 3228 * 229 164 18 91 chr2 28819627 28819682 -221868172 + L2 LINE L2 3171 3221 -92 208 216 0 0 chr2 28819708 28819745 -221868109 + (TGGA)n Simple_repeat Simple_repeat 1 37 0 563 227 18 9 chr2 28820189 28820299 -221867555 - L2 LINE L2 0 3313 3203 366 322 116 22 chr2 28820302 28820569 -221867285 - L2 LINE L2 -577 2737 2446 198 225 0 0 chr2 28820928 28820968 -221866886 - MIR SINE MIR -10 252 213 197 156 31 0 chr2 28821516 28821548 -221866306 - L2 LINE L2 -94 3219 3187 308 218 26 64 chr2 28821986 28822064 -221865790 + L1MC4 LINE L1 6628 6702 -1340 1482 163 71 39 chr2 28822080 28822363 -221865491 - AluJo SINE Alu -20 292 1 2355 107 0 0 chr2 28822886 28823186 -221864668 - AluSx SINE Alu -12 300 1 238 161 0 71 chr2 28823400 28823456 -221864398 + L2 LINE L2 3262 3313 0 1883 150 27 0 chr2 28823603 28823897 -221863957 - AluJb SINE Alu 0 312 11 250 186 0 0 chr2 28825793 28825836 -221862018 - 5S rRNA rRNA -78 43 1 294 87 0 0 chr2 28825888 28825934 -221861920 + (TG)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 28826439 28826467 -221861387 + (TG)n Simple_repeat Simple_repeat 2 29 0 891 152 0 0 chr2 28826637 28826769 -221861085 - FLAM_C SINE Alu -1 132 1 574 138 21 0 chr2 28826774 28826868 -221860986 - FRAM SINE Alu -14 162 67 1196 141 10 26 chr2 28826941 28827133 -221860721 + MER5A DNA MER1_type 1 189 0 2207 98 0 0 chr2 28827485 28827770 -221860084 - AluSx SINE Alu -1 311 27 910 123 58 14 chr2 28828263 28828401 -221859453 + AluJb SINE Alu 156 299 -13 918 174 0 4 chr2 28828401 28828574 -221859280 + L1MB5 LINE L1 5823 5982 -192 183 238 124 97 chr2 28828704 28829002 -221858852 + L2 LINE L2 2964 3269 -44 3545 160 6 21 chr2 28829072 28829353 -221858501 + L1MB5 LINE L1 5551 5835 -339 1914 144 13 10 chr2 28829353 28829651 -221858203 + AluJb SINE Alu 1 299 -13 3545 160 6 21 chr2 28829651 28830001 -221857853 + L1MB5 LINE L1 5835 6173 -1 2369 97 0 0 chr2 28830006 28830304 -221857550 + AluSc SINE Alu 1 298 -11 209 222 28 130 chr2 28831085 28831193 -221856661 - MIR SINE MIR -73 135 39 376 287 44 55 chr2 28831648 28831702 -221856152 - MIR SINE MIR -78 184 131 1582 194 14 21 chr2 28831702 28831990 -221855864 + AluJo SINE Alu 1 286 -26 376 287 44 55 chr2 28831990 28832116 -221855738 - MIR SINE MIR -131 131 6 453 251 171 24 chr2 28833416 28833627 -221854227 + MIR SINE MIR 21 262 0 440 288 7 46 chr2 28833612 28833765 -221854089 - MIR SINE MIR -100 162 16 * 2375 72 0 7 chr2 28835203 28835495 -221852359 - AluSc SINE Alu 0 309 20 231 266 31 16 chr2 28836521 28836585 -221851269 - L2 LINE L2 -270 3002 2938 440 389 57 9 chr2 28836599 28836828 -221851026 - L3 LINE CR1 -58 1519 1280 6968 202 64 26 chr2 28837197 28837426 -221850428 + L1MB8 LINE L1 3209 3428 -2750 2609 67 0 3 chr2 28837426 28837738 -221850116 + AluY SINE Alu 1 311 0 6968 202 64 26 chr2 28837738 28838246 -221849608 + L1MB8 LINE L1 3428 3915 -2263 2041 143 7 0 chr2 28838246 28838547 -221849307 + AluSx SINE Alu 1 303 -9 6968 202 64 26 chr2 28838547 28840670 -221847184 + L1MB8 LINE L1 3915 6173 -5 5750 71 13 22 chr2 28841939 28842123 -221845731 - L1PB2 LINE L1 -2 6149 5965 2161 121 0 44 chr2 28842123 28842438 -221845416 - AluSx SINE Alu -11 301 1 5750 71 13 22 chr2 28842438 28843114 -221844740 - L1PB2 LINE L1 -186 5965 5297 1950 109 69 0 chr2 28843315 28843591 -221844263 - AluY SINE Alu -15 296 2 221 323 0 0 chr2 28843924 28843986 -221843868 - MIR SINE MIR -110 152 91 2262 114 0 0 chr2 28844189 28844479 -221843375 + AluSx SINE Alu 1 290 -22 322 311 8 25 chr2 28844527 28844649 -221843205 - MIR3 SINE MIR -43 165 46 806 278 24 0 chr2 28844761 28844973 -221842881 - MIR SINE MIR -13 249 33 228 164 0 82 chr2 28845050 28845111 -221842743 + LTR65 LTR ERV1 259 314 -355 2186 134 3 0 chr2 28845301 28845600 -221842254 + AluSg SINE Alu 1 300 -10 300 272 82 95 chr2 28846074 28846306 -221841548 - L2 LINE L2 -23 3249 3021 338 158 0 0 chr2 28846306 28846363 -221841491 + MER66B LTR ERV1 292 348 -138 266 215 118 11 chr2 28848003 28848096 -221839758 - L2 LINE L2 -38 3234 3132 2306 114 3 0 chr2 28848173 28848472 -221839382 + AluSx SINE Alu 1 300 -12 197 229 244 8 chr2 28849088 28849219 -221838635 - MIR3 SINE MIR -4 204 43 462 18 0 0 chr2 28849223 28849278 -221838576 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2164 121 27 3 chr2 28849426 28849724 -221838130 + AluJb SINE Alu 1 305 -7 2097 146 78 43 chr2 28850872 28850930 -221836924 + Tigger4(Zombi) DNA MER2_type 1 55 -2676 2292 102 7 3 chr2 28850930 28851225 -221836629 - AluSx SINE Alu -16 296 1 2097 146 78 43 chr2 28851225 28851563 -221836291 + Tigger4(Zombi) DNA MER2_type 55 411 -2320 461 165 12 0 chr2 28851575 28851660 -221836194 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 794 272 53 4 chr2 28852575 28852821 -221835033 + MIR SINE MIR 2 259 -3 2372 98 0 3 chr2 28853010 28853317 -221834537 - AluSx SINE Alu -6 306 1 2067 151 0 3 chr2 28854477 28854789 -221833065 - AluJb SINE Alu -1 311 1 2061 133 27 0 chr2 28855075 28855368 -221832486 + AluJb SINE Alu 2 302 -10 469 271 180 59 chr2 28855410 28855665 -221832189 - LTR67 LTR ERVL -263 294 9 2419 61 0 14 chr2 28856624 28856918 -221830936 + AluSg SINE Alu 1 290 -20 268 271 209 31 chr2 28859251 28859380 -221828474 + MER5B DNA MER1_type 2 153 -25 204 100 0 0 chr2 28859393 28859423 -221828431 + L3 LINE CR1 1543 1572 -5 200 198 35 23 chr2 28860100 28860186 -221827668 + CT-rich Low_complexity Low_complexity 3 89 0 445 229 41 41 chr2 28863220 28863342 -221824512 - MER103 DNA DNA -22 144 23 2529 66 0 3 chr2 28864722 28865024 -221822830 + AluY SINE Alu 1 301 -10 369 268 105 13 chr2 28865477 28865630 -221822224 + MIR SINE MIR 86 252 -10 2012 137 11 0 chr2 28867497 28867782 -221820072 - AluSx SINE Alu -24 288 1 1876 171 3 7 chr2 28867782 28868075 -221819779 - AluJb SINE Alu -17 295 4 564 323 7 48 chr2 28868698 28868967 -221818887 + L3 LINE CR1 1319 1576 -1 311 65 22 0 chr2 28869323 28869369 -221818485 + (CA)n Simple_repeat Simple_repeat 1 47 0 209 373 49 0 chr2 28870453 28870555 -221817299 - MER91C DNA MER1_type -33 107 1 205 231 0 0 chr2 28871307 28871346 -221816508 - MIR SINE MIR -21 241 203 299 287 195 20 chr2 28872814 28873009 -221814845 - MIR SINE MIR -2 260 32 360 322 46 15 chr2 28874053 28874301 -221813553 - MIR SINE MIR -3 259 1 1768 181 3 19 chr2 28876774 28877088 -221810766 - AluJo SINE Alu -3 309 1 305 260 24 55 chr2 28877820 28877947 -221809907 - L3 LINE CR1 -1 1576 1454 1143 92 0 0 chr2 28877966 28878130 -221809724 - L1PA8 LINE L1 -2 6170 6007 811 132 0 29 chr2 28878183 28878319 -221809535 - FLAM_C SINE Alu -1 132 1 197 300 180 34 chr2 28878425 28878658 -221809196 - L3 LINE CR1 -374 1203 937 280 329 45 19 chr2 28878676 28878831 -221809023 - L3 LINE CR1 -146 1431 1273 2341 91 0 19 chr2 28879727 28880036 -221807818 + AluY SINE Alu 1 303 -8 205 305 9 48 chr2 28880272 28880377 -221807477 + MIR SINE MIR 53 153 -55 1799 153 16 45 chr2 28880471 28880784 -221807070 - AluSx SINE Alu -6 306 3 1803 184 0 17 chr2 28880789 28881088 -221806766 - AluJo SINE Alu -13 299 6 831 319 66 7 chr2 28882703 28883298 -221804556 - L2 LINE L2 -8 3305 2664 227 305 85 34 chr2 28883559 28883677 -221804177 - L2 LINE L2 -1 3312 3189 2644 135 23 15 chr2 28883770 28884244 -221803610 + L1MA5 LINE L1 5821 6298 -2 408 159 0 0 chr2 28884277 28884346 -221803508 + MER5A DNA MER1_type 41 109 -80 26 64 0 0 chr2 28885102 28885149 -221802705 + AT_rich Low_complexity Low_complexity 1 47 0 1308 98 5 10 chr2 28886906 28887110 -221800744 - L1PA13 LINE L1 -1 6162 5960 209 301 72 0 chr2 28889047 28889130 -221798724 - MIR SINE MIR -168 94 6 210 217 22 0 chr2 28889713 28889759 -221798095 + (TTA)n Simple_repeat Simple_repeat 3 49 0 699 276 65 17 chr2 28890088 28890320 -221797534 + MIR SINE MIR 6 248 -14 191 291 44 76 chr2 28890400 28890475 -221797379 - L2 LINE L2 -1 3312 3236 2122 135 10 6 chr2 28890475 28890786 -221797068 + AluSq SINE Alu 1 312 -1 191 291 44 76 chr2 28890786 28890868 -221796986 - L2 LINE L2 -77 3236 3160 546 255 14 7 chr2 28890979 28891124 -221796730 - MIR3 SINE MIR -22 186 41 540 208 39 32 chr2 28891616 28891632 -221796222 - L1MA10 LINE L1 0 6334 6319 1205 238 34 47 chr2 28891632 28891688 -221796166 - L1ME1 LINE L1 -5 6161 6106 2024 120 21 7 chr2 28891688 28891971 -221795883 + AluJb SINE Alu 1 287 -25 1205 238 34 47 chr2 28891971 28892302 -221795552 - L1ME1 LINE L1 -60 6106 5783 333 329 43 31 chr2 28892430 28892591 -221795263 + L3b LINE CR1 1110 1272 -311 2504 87 0 0 chr2 28893854 28894164 -221793690 - AluSx SINE Alu -2 310 1 188 250 0 0 chr2 28895846 28895886 -221791968 - L2 LINE L2 -4 3268 3229 256 250 78 0 chr2 28896733 28896797 -221791057 + MIR SINE MIR 77 145 -117 371 147 11 105 chr2 28896825 28896920 -221790934 + MIR3 SINE MIR 97 182 -26 268 277 128 21 chr2 28897230 28897324 -221790530 + MIR3 SINE MIR 96 199 -9 491 239 26 8 chr2 28897410 28897527 -221790327 + MIR SINE MIR 64 182 -80 1003 191 6 0 chr2 28898876 28899049 -221788805 + FRAM SINE Alu 1 174 -2 1799 104 123 4 chr2 28900376 28900644 -221787210 + AluSg SINE Alu 1 300 0 265 278 194 37 chr2 28901173 28901364 -221786490 + MIR SINE MIR 31 251 -11 183 207 121 0 chr2 28902287 28902345 -221785509 + L3 LINE CR1 591 655 -922 1963 146 3 13 chr2 28902493 28902801 -221785053 + AluJb SINE Alu 1 305 -7 382 302 141 0 chr2 28903192 28903341 -221784513 - MIR3 SINE MIR -9 199 30 242 244 0 0 chr2 28903807 28903848 -221784006 + MER5B DNA MER1_type 3 43 -135 526 97 43 0 chr2 28903853 28903946 -221783908 + (TATG)n Simple_repeat Simple_repeat 2 98 0 2027 133 0 18 chr2 28903946 28904231 -221783623 - AluSx SINE Alu -32 280 1 1595 237 49 56 chr2 28904260 28904872 -221782982 + L1ME3A LINE L1 5558 6165 -5 2285 114 3 10 chr2 28904879 28905186 -221782668 + AluSq SINE Alu 1 305 -8 545 199 37 52 chr2 28905191 28905327 -221782527 - MER5B DNA MER1_type -44 134 1 249 296 105 42 chr2 28905327 28905756 -221782098 + L2 LINE L2 2660 3110 -162 1360 292 221 28 chr2 28905893 28906739 -221781115 - L2 LINE L2 0 3313 2632 1547 105 0 24 chr2 28906739 28906949 -221780905 + AluSg/x SINE Alu 90 294 -16 1360 292 221 28 chr2 28906949 28907495 -221780359 - L2 LINE L2 -681 2632 1628 2213 97 7 0 chr2 28909193 28909482 -221778372 + AluSx SINE Alu 1 291 -21 261 326 22 22 chr2 28909490 28909582 -221778272 - L2 LINE L2 -27 3245 3154 213 275 14 43 chr2 28911369 28911438 -221776416 - L2 LINE L2 0 3272 3206 527 178 68 0 chr2 28911869 28911987 -221775867 + L1MB5 LINE L1 6049 6174 0 188 248 88 88 chr2 28912057 28912170 -221775684 + MIR SINE MIR 46 158 -104 341 218 162 73 chr2 28912736 28912970 -221774884 + L1MEd LINE L1 467 721 -5398 328 264 34 0 chr2 28913528 28913615 -221774239 - MIR SINE MIR -33 175 83 2357 97 0 0 chr2 28913835 28914134 -221773720 - AluSx SINE Alu -12 300 2 1192 86 114 68 chr2 28914204 28914299 -221773555 - MER30 DNA MER1_type 0 230 141 198 0 0 0 chr2 28914299 28914321 -221773533 + (TG)n Simple_repeat Simple_repeat 1 22 0 1192 86 114 68 chr2 28914321 28914445 -221773409 - MER30 DNA MER1_type -89 141 1 455 236 110 0 chr2 28914756 28914883 -221772971 - MIR SINE MIR -6 256 116 2086 144 0 10 chr2 28915173 28915479 -221772375 - AluJb SINE Alu -9 303 1 1276 108 216 34 chr2 28915484 28915780 -221772074 - Tigger7 DNA MER2_type -22 2465 2116 284 214 0 0 chr2 28915776 28915832 -221772022 - Tigger7 DNA MER2_type -493 57 2 * 902 176 132 16 chr2 28915840 28916090 -221771764 + LTR37B LTR ERV1 6 284 -184 183 202 277 67 chr2 28916567 28916686 -221771168 + MIR SINE MIR 116 259 -3 954 220 23 0 chr2 28917327 28917500 -221770354 - MER45A DNA AcHobo -1 177 1 360 277 30 0 chr2 28917957 28918058 -221769796 + MIR SINE MIR 159 262 0 1792 208 184 123 chr2 28918359 28918414 -221769440 - Charlie7 DNA MER1_type -41 2571 2521 1919 147 41 32 chr2 28918414 28918545 -221769309 + MER2 DNA MER2_type 1 129 -215 1851 120 62 38 chr2 28918545 28918836 -221769018 - AluSq SINE Alu -15 298 1 1919 147 41 32 chr2 28918836 28919045 -221768809 + MER2 DNA MER2_type 129 344 0 1792 208 184 123 chr2 28919045 28919428 -221768426 - Charlie7 DNA MER1_type -91 2521 2163 2159 107 0 4 chr2 28919428 28919708 -221768146 - AluSg SINE Alu -31 279 1 1792 208 184 123 chr2 28919708 28920972 -221766882 - Charlie7 DNA MER1_type -449 2163 756 2205 120 0 7 chr2 28920972 28921272 -221766582 + AluSx SINE Alu 3 300 -12 1792 208 184 123 chr2 28921272 28921324 -221766530 - Charlie7 DNA MER1_type -1856 756 709 2298 111 3 0 chr2 28921509 28921815 -221766039 - AluSg SINE Alu -3 307 1 818 234 233 54 chr2 28921815 28922408 -221765446 - Charlie7 DNA MER1_type -1879 733 35 447 301 7 33 chr2 28923218 28923371 -221764483 + MER5A DNA MER1_type 13 161 -28 740 183 8 0 chr2 28923719 28923845 -221764009 + FLAM_C SINE Alu 1 127 -16 2161 138 0 19 chr2 28923963 28924142 -221763712 - AluSx SINE Alu 0 312 131 2310 114 0 9 chr2 28924142 28924457 -221763397 - AluSq SINE Alu -1 312 1 185 0 0 39 chr2 28924457 28924483 -221763371 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2157 117 7 0 chr2 28924483 28924766 -221763088 - AluSq SINE Alu -28 285 1 2161 138 0 19 chr2 28924766 28924902 -221762952 - AluSx SINE Alu -178 134 1 801 179 87 0 chr2 28925893 28926066 -221761788 - MER53 DNA DNA 0 189 2 2198 138 0 0 chr2 28926152 28926456 -221761398 + AluSx SINE Alu 1 304 -8 373 322 112 13 chr2 28926802 28926954 -221760900 + MIR SINE MIR 2 168 -94 1819 198 75 19 chr2 28926972 28927436 -221760418 - L1ME1 LINE L1 -211 5955 5466 401 319 43 0 chr2 28927436 28927552 -221760302 + MIR SINE MIR 21 141 -121 206 339 0 0 chr2 28928278 28928334 -221759520 - MER5A DNA MER1_type -71 118 63 855 161 0 22 chr2 28928343 28928480 -221759374 + AluJb SINE Alu 1 134 -178 22 0 0 0 chr2 28928520 28928542 -221759312 + AT_rich Low_complexity Low_complexity 1 22 0 467 290 53 38 chr2 28928581 28928712 -221759142 + MER5A DNA MER1_type 1 133 -56 1736 144 36 7 chr2 28928712 28929017 -221758837 - AluSx SINE Alu 0 313 1 2199 105 13 20 chr2 28929048 28929353 -221758501 + AluSx SINE Alu 1 303 -9 405 261 63 14 chr2 28929585 28929727 -221758127 - MER103 DNA DNA -4 162 14 346 242 30 68 chr2 28930510 28930642 -221757212 + MIR SINE MIR 70 196 -66 415 324 68 0 chr2 28931121 28931269 -221756585 + MIR SINE MIR 13 170 -92 231 310 42 0 chr2 28931823 28931894 -221755960 + MER5A DNA MER1_type 116 189 0 348 271 146 0 chr2 28931981 28932077 -221755777 - L2 LINE L2 -5 3308 3199 1923 156 190 46 chr2 28932295 28932795 -221755059 + LTR18B LTR ERVL 1 572 -42 362 105 12 93 chr2 28932788 28932874 -221754980 + LTR18A LTR ERVL 279 357 0 * 195 175 32 16 chr2 28932906 28932969 -221754885 + CT-rich Low_complexity Low_complexity 4 67 0 3439 81 32 6 chr2 28933923 28934392 -221753462 - L1PA10 LINE L1 -16 6152 5672 306 276 82 41 chr2 28934592 28934762 -221753092 - MIR SINE MIR -75 187 11 2596 72 3 0 chr2 28935922 28936229 -221751625 + AluSg SINE Alu 1 308 -2 855 158 82 0 chr2 28936761 28936907 -221750947 - MER5A DNA MER1_type -29 160 3 924 82 0 0 chr2 28937374 28937484 -221750370 - AluSq/x SINE Alu -202 110 1 243 247 0 49 chr2 28937486 28937567 -221750287 + MLT1J LTR MaLR 429 505 -6 1145 150 0 0 chr2 28937786 28937953 -221749901 + AluSg/x SINE Alu 134 300 -12 974 158 228 0 chr2 28938100 28938341 -221749513 + L1MB2 LINE L1 5835 6130 -41 1867 143 0 21 chr2 28938341 28938627 -221749227 + AluSx SINE Alu 1 280 -32 217 331 43 31 chr2 28940006 28940169 -221747685 - L2 LINE L2 -1285 2029 1865 254 214 0 0 chr2 28940172 28940214 -221747640 + MER91B DNA MER1_type 1 42 -98 2345 99 21 51 chr2 28940236 28940412 -221747442 + THE1B LTR MaLR 1 181 -183 2313 90 16 16 chr2 28940412 28940735 -221747119 + L1PA10 LINE L1 5846 6168 0 2345 99 21 51 chr2 28940735 28940933 -221746921 + THE1B LTR MaLR 181 364 0 520 237 35 0 chr2 28940945 28941059 -221746795 + MER91B DNA MER1_type 73 190 0 1562 216 58 21 chr2 28941150 28941530 -221746324 - MLT1F1 LTR MaLR 0 567 174 300 200 0 0 chr2 28941530 28941595 -221746259 + G-rich Low_complexity Low_complexity 1 65 0 523 252 57 25 chr2 28941604 28941763 -221746091 - MLT1F1 LTR MaLR -369 173 10 249 307 67 0 chr2 28942993 28943068 -221744786 + L2 LINE L2 3168 3247 -25 1909 147 7 23 chr2 28943301 28943608 -221744246 + AluJo SINE Alu 11 312 0 368 299 21 0 chr2 28943654 28943751 -221744103 + L2 LINE L2 3168 3266 -6 524 229 0 89 chr2 28944096 28944253 -221743601 + MIR3 SINE MIR 66 208 0 315 308 90 14 chr2 28944482 28944620 -221743234 + MIR3 SINE MIR 3 151 -69 2226 83 21 0 chr2 28944781 28945071 -221742783 - AluSq SINE Alu -17 296 1 379 271 0 9 chr2 28945190 28945297 -221742557 + MIR SINE MIR 59 164 -98 346 275 148 27 chr2 28945645 28945794 -221742060 + MER91A DNA MER1_type 20 186 -10 808 177 78 5 chr2 28947252 28947444 -221740410 - MER115 DNA AcHobo -8 685 480 631 262 11 47 chr2 28947506 28947697 -221740157 - MER115 DNA AcHobo -324 369 186 613 174 0 0 chr2 28947784 28947876 -221739978 + FRAM SINE Alu 1 92 -84 469 290 16 0 chr2 28947877 28948001 -221739853 - MER115 DNA AcHobo -516 177 52 673 148 0 0 chr2 28948030 28948131 -221739723 + FRAM SINE Alu 55 155 -21 1819 142 3 71 chr2 28948205 28948529 -221739325 + AluJb SINE Alu 1 302 -10 356 257 270 0 chr2 28948606 28948754 -221739100 + MIR SINE MIR 73 260 -2 346 319 75 27 chr2 28949207 28949395 -221738459 - MIR SINE MIR -1 261 65 557 282 97 5 chr2 28951059 28951254 -221736600 + MIR SINE MIR 46 258 -4 220 258 16 0 chr2 28951337 28951399 -221736455 + MIR SINE MIR 188 250 -12 504 136 123 0 chr2 28952036 28952117 -221735737 + 5S rRNA rRNA 1 91 -30 2563 137 54 5 chr2 28953623 28954031 -221733823 + MSTA LTR MaLR 1 428 0 271 295 0 0 chr2 28954212 28954273 -221733581 + L2 LINE L2 2424 2484 -830 260 301 66 71 chr2 28954385 28954524 -221733330 + L2 LINE L2 3075 3214 -58 2119 101 7 0 chr2 28954524 28954821 -221733033 - AluSx SINE Alu -13 299 1 260 301 66 71 chr2 28954821 28954877 -221732977 + L2 LINE L2 3214 3269 -3 633 277 11 113 chr2 28955215 28955489 -221732365 - MIR SINE MIR -5 257 12 247 226 202 45 chr2 28955712 28955865 -221731989 + MIR3 SINE MIR 20 204 -4 1916 156 0 7 chr2 28956234 28956541 -221731313 + AluSx SINE Alu 1 305 -7 268 225 50 38 chr2 28956707 28956787 -221731067 + MIR SINE MIR 123 203 -59 1956 131 60 35 chr2 28956856 28957222 -221730632 - THE1C LTR MaLR 0 375 1 1050 171 11 11 chr2 28957527 28957703 -221730151 - MER58A DNA MER1_type -3 221 46 1610 201 3 0 chr2 28957703 28958007 -221729847 + AluJo SINE Alu 1 305 -7 976 152 6 12 chr2 28958008 28958179 -221729675 + AluJo/FRAM SINE Alu 132 301 -11 2153 106 0 10 chr2 28958263 28958566 -221729288 - AluSx SINE Alu -12 300 1 2262 101 3 0 chr2 28958577 28958884 -221728970 - AluSx SINE Alu -4 308 1 317 160 0 0 chr2 28959029 28959079 -221728775 + Tigger5 DNA MER2_type 1 50 -2273 465 239 0 0 chr2 28959120 28959208 -221728646 - Tigger5 DNA MER2_type -2235 88 1 498 207 0 0 chr2 28959219 28959306 -221728548 + Tigger5 DNA MER2_type 2237 2323 0 420 212 119 42 chr2 28959313 28959324 -221728530 - MIR SINE MIR -89 173 164 2106 120 10 0 chr2 28959324 28959632 -221728222 - AluSx SINE Alu -1 311 1 420 212 119 42 chr2 28959632 28959738 -221728116 - MIR SINE MIR -98 164 47 234 62 0 0 chr2 28960380 28960412 -221727442 + (CA)n Simple_repeat Simple_repeat 2 33 0 1202 284 88 10 chr2 28961226 28961705 -221726149 - LTR33A LTR ERVL -6 517 2 551 344 99 32 chr2 28961989 28962364 -221725490 - L2 LINE L2 -49 3223 2824 1836 203 46 3 chr2 28962441 28962791 -221725063 - MLT1A1 LTR MaLR 0 365 1 1772 101 12 0 chr2 28962832 28963114 -221724740 + AluSx SINE Alu 32 316 0 264 277 0 0 chr2 28963281 28963364 -221724490 + GA-rich Low_complexity Low_complexity 2 84 0 1458 168 50 26 chr2 28963921 28964224 -221723630 + AluJo SINE Alu 1 310 -2 923 148 12 6 chr2 28964698 28964860 -221722994 + FRAM SINE Alu 1 162 -14 3791 139 17 16 chr2 28965042 28965673 -221722181 + L1MB3 LINE L1 5552 6183 0 268 235 0 122 chr2 28965997 28966058 -221721796 + MIR SINE MIR 65 111 -151 885 149 0 8 chr2 28966058 28966192 -221721662 - FLAM_C SINE Alu 0 133 1 268 235 0 122 chr2 28966192 28966228 -221721626 + MIR SINE MIR 111 150 -112 413 81 16 0 chr2 28966266 28966328 -221721526 + (TCC)n Simple_repeat Simple_repeat 1 63 0 790 237 48 5 chr2 28966328 28966514 -221721340 - AluJo SINE Alu -1 311 118 223 419 22 7 chr2 28966597 28966733 -221721121 - MIR3 SINE MIR -62 146 9 546 255 103 0 chr2 28966801 28966946 -221720908 + MIR SINE MIR 20 179 -83 1823 164 3 19 chr2 28967029 28967388 -221720466 + AluJo SINE Alu 1 354 0 1995 123 7 10 chr2 28967391 28967699 -221720155 + AluSx SINE Alu 1 307 -5 1931 114 0 0 chr2 28968596 28968859 -221718995 + AluSx SINE Alu 20 282 -30 234 0 0 0 chr2 28968861 28968887 -221718967 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 616 288 61 10 chr2 28969025 28969223 -221718631 + MIR SINE MIR 49 256 -6 2484 58 0 0 chr2 28969365 28969673 -221718181 + AluY SINE Alu 1 308 -3 1958 139 0 13 chr2 28969918 28970221 -221717633 + AluJb SINE Alu 1 299 -13 233 367 25 25 chr2 28970807 28970927 -221716927 + L2 LINE L2 3183 3302 -11 1187 224 94 63 chr2 28971124 28971199 -221716655 - MLT1D LTR MaLR 0 505 434 1930 114 47 0 chr2 28971199 28971496 -221716358 + AluSx SINE Alu 1 311 -1 1187 224 94 63 chr2 28971496 28971910 -221715944 - MLT1D LTR MaLR -71 434 1 1767 160 3 0 chr2 28971938 28972231 -221715623 + AluSx SINE Alu 1 294 -18 473 289 200 6 chr2 28972622 28972802 -221715052 - MIR SINE MIR -40 222 8 467 266 55 16 chr2 28973367 28973495 -221714359 - MIR3 SINE MIR -53 155 23 300 335 30 68 chr2 28973656 28973892 -221713962 + L2 LINE L2 2967 3193 -79 1713 176 113 93 chr2 28974332 28974459 -221713395 + MLT1D LTR MaLR 1 124 -381 1584 119 0 58 chr2 28974459 28974720 -221713134 + AluJb SINE Alu 43 288 -24 1713 176 113 93 chr2 28974720 28974827 -221713027 + MLT1D LTR MaLR 124 227 -278 222 37 0 0 chr2 28974827 28974854 -221713000 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 540 0 0 0 chr2 28974853 28974913 -221712941 + (GA)n Simple_repeat Simple_repeat 2 61 0 1713 176 113 93 chr2 28974854 28975172 -221712682 + MLT1D LTR MaLR 227 505 0 638 239 105 47 chr2 28975299 28975521 -221712333 - MIR SINE MIR -2 260 7 475 242 32 24 chr2 28975600 28975724 -221712130 - MIR SINE MIR -16 246 122 1438 173 83 0 chr2 28976582 28976860 -221710994 + AluJb SINE Alu 1 301 -11 449 252 154 14 chr2 28976860 28977003 -221710851 + MIR3 SINE MIR 27 189 -19 1940 104 0 85 chr2 28977760 28978088 -221709766 - AluSx SINE Alu -12 300 1 620 254 149 31 chr2 28978466 28978694 -221709160 - MIR SINE MIR 0 262 8 270 302 47 47 chr2 28978689 28978818 -221709036 + L2 LINE L2 3138 3266 -6 * 449 147 368 0 chr2 28979438 28979533 -221708321 - FLAM_C SINE Alu -3 130 1 482 43 159 0 chr2 28979611 28979680 -221708174 - MADE1 DNA Mariner 0 80 1 2001 79 0 0 chr2 28979995 28980260 -221707594 + AluY SINE Alu 41 305 -6 536 292 52 26 chr2 28980481 28980651 -221707203 - MIR SINE MIR -48 214 50 2008 111 0 7 chr2 28980651 28980966 -221706888 + AluSx SINE Alu 5 317 0 536 292 52 26 chr2 28980966 28980979 -221706875 - MIR SINE MIR -212 50 39 356 73 36 0 chr2 28980979 28981034 -221706820 + L1MA6 LINE L1 6244 6300 0 246 192 0 39 chr2 28981073 28981125 -221706729 - MIR SINE MIR -208 54 5 21 0 0 0 chr2 28981201 28981222 -221706632 + AT_rich Low_complexity Low_complexity 1 21 0 2172 106 0 10 chr2 28981375 28981678 -221706176 + AluSq SINE Alu 1 300 -13 731 157 0 0 chr2 28981981 28982102 -221705752 - FLAM_C SINE Alu 0 143 23 526 332 44 22 chr2 28982256 28982530 -221705324 + L1MEc LINE L1 2120 2399 -3997 1395 182 91 0 chr2 28982536 28982800 -221705054 + AluJo SINE Alu 1 288 -24 24 0 0 0 chr2 28982801 28982825 -221705029 + AT_rich Low_complexity Low_complexity 1 24 0 820 181 22 22 chr2 28982825 28983007 -221704847 + FRAM SINE Alu 1 176 0 318 300 25 33 chr2 28983007 28983127 -221704727 + L1MEc LINE L1 2363 2481 -3734 2170 79 3 0 chr2 28983138 28983429 -221704425 + AluY SINE Alu 1 292 -19 341 260 80 20 chr2 28983582 28983682 -221704172 - L2 LINE L2 -12 3301 3196 2093 104 3 7 chr2 28983733 28984031 -221703823 - AluSc SINE Alu -12 297 1 419 280 10 10 chr2 28985505 28985605 -221702249 - L2 LINE L2 -14 3299 3200 359 311 44 27 chr2 28985611 28985794 -221702060 - L2 LINE L2 -252 3061 2876 1780 122 70 0 chr2 28985862 28986132 -221701722 + AluSx SINE Alu 1 289 -23 207 0 0 0 chr2 28986132 28986155 -221701699 + (GA)n Simple_repeat Simple_repeat 2 24 0 2466 47 0 0 chr2 28986293 28986589 -221701265 - AluY SINE Alu -15 296 1 1874 136 0 23 chr2 28986874 28987182 -221700672 + AluSx SINE Alu 1 301 -11 1846 159 3 3 chr2 28987488 28987796 -221700058 - AluSx SINE Alu -4 308 1 209 328 16 0 chr2 28987871 28987935 -221699919 + L3 LINE CR1 1297 1361 -216 1920 129 20 0 chr2 28987966 28988260 -221699594 + AluSq SINE Alu 1 300 -13 193 125 31 0 chr2 28988352 28988384 -221699470 + MIR3 SINE MIR 165 197 -11 1320 164 4 13 chr2 28988465 28988697 -221699157 + L1M4 LINE L1 5374 5603 -581 1877 124 0 0 chr2 28988701 28988974 -221698880 + AluSg SINE Alu 29 301 -9 1998 218 107 43 chr2 28989125 28989216 -221698638 + Zaphod DNA AcHobo 2 86 -3945 2152 123 7 0 chr2 28989216 28989526 -221698328 + AluSx SINE Alu 1 312 0 1998 218 107 43 chr2 28989526 28989993 -221697861 + Zaphod DNA AcHobo 86 596 -3435 1221 152 5 0 chr2 28990006 28990203 -221697651 - AluJb SINE Alu -31 281 84 689 107 54 0 chr2 28990203 28990315 -221697539 + FLAM_C SINE Alu 14 131 -12 573 149 95 68 chr2 28990316 28990537 -221697317 + Zaphod DNA AcHobo 764 990 -3041 * 710 204 102 34 chr2 28990536 28990786 -221697068 + Zaphod DNA AcHobo 3596 3875 -156 1934 96 14 7 chr2 28990786 28991090 -221696764 + AluSq SINE Alu 1 306 0 710 204 102 34 chr2 28991090 28991161 -221696693 + Zaphod DNA AcHobo 3875 3940 -91 1732 108 81 0 chr2 28991163 28991422 -221696432 + AluSx SINE Alu 1 280 -32 2172 92 20 0 chr2 28991444 28991747 -221696107 + AluY SINE Alu 1 309 -2 483 325 13 0 chr2 28991780 28991931 -221695923 - MER91A DNA MER1_type -43 153 1 239 291 105 12 chr2 28993467 28993553 -221694301 - L2 LINE L2 -21 3251 3158 1656 150 65 0 chr2 28993778 28994071 -221693783 - AluSx SINE Alu 0 312 1 1886 108 7 43 chr2 28994758 28995063 -221692791 + AluSx SINE Alu 1 294 -18 853 215 23 41 chr2 28995956 28996071 -221691783 + MER58C DNA MER1_type 1 117 -2303 1807 153 7 0 chr2 28996071 28996397 -221691457 + AluSx SINE Alu 1 328 0 1883 129 3 3 chr2 28996400 28996724 -221691130 + AluSx SINE Alu 1 324 0 853 215 23 41 chr2 28996724 28996821 -221691033 + MER58C DNA MER1_type 119 215 0 324 120 0 0 chr2 28997651 28997701 -221690153 + (TG)n Simple_repeat Simple_repeat 1 50 0 347 155 0 14 chr2 28998136 28998207 -221689647 + CT-rich Low_complexity Low_complexity 4 73 0 892 291 70 49 chr2 28998213 28998659 -221689195 - L2 LINE L2 -14 3299 2845 1602 151 51 14 chr2 28998694 28998986 -221688868 + AluJo SINE Alu 3 305 -7 1626 164 7 0 chr2 28999246 28999532 -221688322 - AluSx SINE Alu 0 312 25 2298 128 53 14 chr2 28999692 29000129 -221687725 + Tigger3b DNA MER2_type 325 778 -453 1290 161 141 16 chr2 29000123 29000378 -221687476 + Tigger3b DNA MER2_type 945 1231 0 * 1893 113 46 14 chr2 29000672 29000956 -221686898 - AluSg SINE Alu -17 293 1 5270 192 70 34 chr2 29001619 29001768 -221686086 - Charlie1a DNA MER1_type -1306 1455 1313 2031 127 7 10 chr2 29001768 29002067 -221685787 + AluSx SINE Alu 1 298 -14 5270 192 70 34 chr2 29002067 29003260 -221684594 - Charlie1a DNA MER1_type -1448 1313 64 2156 100 10 3 chr2 29003477 29003767 -221684087 - AluSg SINE Alu -18 292 1 260 287 11 11 chr2 29003865 29003945 -221683909 + GA-rich Low_complexity Low_complexity 2 84 -4 2278 108 0 0 chr2 29003945 29004241 -221683613 + AluY SINE Alu 1 296 -15 1467 155 36 8 chr2 29004445 29004697 -221683157 + AluSx SINE Alu 36 294 -18 8903 178 97 50 chr2 29004900 29005358 -221682496 - Cheshire DNA MER1_type -202 2218 1783 1696 169 37 7 chr2 29005358 29005654 -221682200 + AluJo SINE Alu 1 305 -7 8903 178 97 50 chr2 29005654 29006524 -221681330 - Cheshire DNA MER1_type -637 1783 956 2434 68 3 0 chr2 29006524 29006818 -221681036 + AluY SINE Alu 1 295 -16 8903 178 97 50 chr2 29006818 29007600 -221680254 - Cheshire DNA MER1_type -1464 956 7 211 161 286 0 chr2 29007659 29007715 -221680139 + MIR SINE MIR 32 103 -105 324 311 62 62 chr2 29007852 29008273 -221679581 + L1ME LINE L1 492 991 -5539 969 266 125 17 chr2 29008513 29008960 -221678894 + L1ME LINE L1 1404 1801 -4920 1604 103 5 5 chr2 29008960 29009184 -221678670 - AluSp SINE Alu -15 298 75 969 266 125 17 chr2 29009184 29009466 -221678388 + L1ME LINE L1 1801 2280 -4441 759 228 50 8 chr2 29009469 29009709 -221678145 + L1ME LINE L1 2354 2563 -3977 1847 126 38 0 chr2 29009709 29009972 -221677882 + AluSq SINE Alu 1 273 -40 2438 86 0 9 chr2 29010561 29010876 -221676978 + AluSq SINE Alu 1 312 -1 1757 185 17 0 chr2 29011112 29011409 -221676445 - AluJo SINE Alu -7 305 4 1473 154 0 0 chr2 29011419 29011639 -221676215 - AluJb SINE Alu -7 305 86 2353 98 3 0 chr2 29011665 29011970 -221675884 - AluSc SINE Alu -3 306 1 315 317 41 8 chr2 29011971 29012094 -221675760 + MER5A DNA MER1_type 63 189 0 * 780 237 20 41 chr2 29012094 29012289 -221675565 + MIR SINE MIR 71 260 -2 2188 105 14 0 chr2 29012312 29012607 -221675247 - AluSx SINE Alu -13 299 1 307 234 26 0 chr2 29012671 29012748 -221675106 - MER110 LTR ERV1 -42 449 371 1576 176 59 7 chr2 29012878 29013150 -221674704 + AluJo SINE Alu 12 297 -15 2206 128 0 7 chr2 29013373 29013679 -221674175 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 29013679 29013702 -221674152 + AT_rich Low_complexity Low_complexity 1 23 0 1410 131 0 0 chr2 29014120 29014311 -221673543 - AluSx SINE Alu -121 191 1 263 342 18 0 chr2 29014919 29015033 -221672821 - L1ME3 LINE L1 -2 6160 6045 1232 194 0 0 chr2 29015039 29015255 -221672599 + AluJb SINE Alu 97 312 0 629 162 28 35 chr2 29015261 29015403 -221672451 - L1ME3 LINE L1 -112 6050 5910 439 153 0 0 chr2 29015408 29015467 -221672387 - AluJo SINE Alu -22 290 232 957 180 6 34 chr2 29015471 29015649 -221672205 - AluJo SINE Alu -139 173 1 2612 220 88 37 chr2 29015651 29016450 -221671404 - L1ME3 LINE L1 -256 5906 5017 2338 100 17 0 chr2 29016450 29016751 -221671103 + AluSq SINE Alu 1 306 -7 2612 220 88 37 chr2 29016751 29017166 -221670688 - L1ME3 LINE L1 -1145 5017 4625 2271 128 0 0 chr2 29017190 29017502 -221670352 - AluSx SINE Alu 0 312 1 553 276 76 77 chr2 29017914 29018193 -221669661 + L2 LINE L2 2722 3000 -313 213 39 0 0 chr2 29018193 29018219 -221669635 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1968 122 7 0 chr2 29018221 29018500 -221669354 - AluSx SINE Alu -31 281 1 553 276 76 77 chr2 29018500 29018620 -221669234 + L2 LINE L2 3001 3139 -174 414 0 0 0 chr2 29018621 29018667 -221669187 + (CA)n Simple_repeat Simple_repeat 2 47 0 357 250 120 0 chr2 29018690 29018782 -221669072 + MER81 DNA DNA 8 110 -4 611 229 38 8 chr2 29018782 29018913 -221668941 + L2 LINE L2 3179 3313 0 3232 141 20 6 chr2 29019364 29019902 -221667952 + L1MA4 LINE L1 5747 6292 -8 5515 165 14 3 chr2 29020086 29021032 -221666822 - L1PA14 LINE L1 -1432 4714 3759 6525 79 26 21 chr2 29021032 29021122 -221666732 + L1PA14 LINE L1 4728 4816 -1345 2035 88 3 61 chr2 29021122 29021462 -221666392 + AluSg SINE Alu 1 323 0 6525 79 26 21 chr2 29021462 29022468 -221665386 + L1PA14 LINE L1 4816 5821 -340 2062 147 0 6 chr2 29022468 29022781 -221665073 + AluSx SINE Alu 1 311 -1 6525 79 26 21 chr2 29022781 29023115 -221664739 + L1PA14 LINE L1 5821 6152 -9 261 277 133 43 chr2 29023426 29023614 -221664240 + MIR SINE MIR 31 235 -27 200 371 72 21 chr2 29024080 29024130 -221663724 + MIR SINE MIR 44 90 -118 1645 187 7 7 chr2 29024130 29024429 -221663425 - AluJo SINE Alu -13 299 1 200 371 72 21 chr2 29024429 29024475 -221663379 + MIR SINE MIR 90 145 -63 346 317 50 8 chr2 29025092 29025212 -221662642 - MIR3 SINE MIR -3 205 81 26 30 0 0 chr2 29025489 29025522 -221662332 + AT_rich Low_complexity Low_complexity 1 33 0 1855 136 42 3 chr2 29025752 29026039 -221661815 + AluJo SINE Alu 1 298 -14 26 0 0 0 chr2 29027307 29027333 -221660521 + AT_rich Low_complexity Low_complexity 1 26 0 243 238 143 0 chr2 29027525 29027609 -221660245 + L1ME4a LINE L1 6009 6104 -17 248 306 31 0 chr2 29027640 29027738 -221660116 + MER46C DNA MER2_type 194 294 -44 787 228 114 17 chr2 29028875 29029112 -221658742 + MIR SINE MIR 3 262 0 2315 67 3 19 chr2 29032059 29032371 -221655483 - AluSg1 SINE Alu -1 308 2 28 95 0 0 chr2 29032371 29032455 -221655399 + AT_rich Low_complexity Low_complexity 1 84 0 203 191 0 24 chr2 29032780 29032822 -221655032 - L2 LINE L2 -81 3191 3151 1874 114 40 10 chr2 29033377 29033674 -221654180 - AluSq SINE Alu -7 306 1 364 261 98 25 chr2 29034284 29034487 -221653367 - L1ME4a LINE L1 -81 6040 5823 1497 168 0 15 chr2 29034860 29035122 -221652732 - AluJo SINE Alu -54 258 1 2959 136 67 40 chr2 29035215 29035796 -221652058 - L1MB8 LINE L1 -9 6169 5573 1055 147 80 59 chr2 29036361 29036599 -221651255 - AluJo SINE Alu 0 312 70 754 220 56 60 chr2 29037379 29037568 -221650286 + Tigger3(Golem) DNA MER2_type 17 206 -1025 674 291 17 30 chr2 29037568 29037870 -221649984 + AluSx SINE Alu 1 298 -4 754 220 56 60 chr2 29037870 29037912 -221649942 + Tigger3(Golem) DNA MER2_type 206 247 -984 1946 112 0 0 chr2 29038078 29038338 -221649516 - AluSq SINE Alu -53 260 1 1706 163 7 17 chr2 29038721 29039021 -221648833 - AluJb SINE Alu -15 297 1 1195 179 153 48 chr2 29039021 29039289 -221648565 - AluJo SINE Alu -6 296 1 2324 93 10 0 chr2 29039862 29040172 -221647682 - AluSp SINE Alu 0 313 1 309 195 155 63 chr2 29040742 29040916 -221646938 + L1M4 LINE L1 5194 5383 -763 209 222 0 74 chr2 29041199 29041253 -221646601 + L2 LINE L2 3209 3258 -14 2143 141 0 3 chr2 29041253 29041566 -221646288 - AluSp SINE Alu -1 312 1 1658 229 113 22 chr2 29041869 29042328 -221645526 - MLT1F1 LTR MaLR 0 567 67 330 313 21 10 chr2 29043433 29043529 -221644325 - L2 LINE L2 -24 3289 3193 2298 102 0 6 chr2 29043678 29043993 -221643861 - AluSp SINE Alu 0 313 1 1335 161 68 14 chr2 29044816 29045108 -221642746 - L1MA8 LINE L1 -2 6289 5982 22 35 0 0 chr2 29045591 29045620 -221642234 + AT_rich Low_complexity Low_complexity 1 29 0 2324 92 0 3 chr2 29047077 29047372 -221640482 + AluSg SINE Alu 1 294 -16 571 165 41 21 chr2 29048055 29048152 -221639702 - FLAM_A SINE Alu -32 110 12 777 153 0 36 chr2 29048236 29048373 -221639481 + AluJo/FLAM SINE Alu 1 132 -170 285 229 0 16 chr2 29048373 29048434 -221639420 + AluSg/x SINE Alu 132 191 -109 * 1348 219 59 0 chr2 29048412 29048682 -221639172 + MLT1A1 LTR MaLR 55 340 -25 1246 274 84 44 chr2 29048905 29049355 -221638499 - L1M4 LINE L1 -1082 5133 4650 2283 95 10 0 chr2 29049355 29049651 -221638203 + AluSq SINE Alu 1 299 -14 1246 274 84 44 chr2 29049651 29049816 -221638038 - L1M4 LINE L1 -1565 4650 4493 1311 248 64 59 chr2 29049837 29050434 -221637420 - L1MEc LINE L1 -3372 2843 2272 2204 105 21 0 chr2 29050434 29050720 -221637134 - AluSx SINE Alu -20 292 1 1311 248 64 59 chr2 29050720 29050908 -221636946 - L1MEc LINE L1 -3943 2272 2086 1819 59 40 0 chr2 29051170 29051392 -221636462 + AluY SINE Alu 73 303 -8 2444 59 0 0 chr2 29051770 29052058 -221635796 + AluY SINE Alu 1 288 -23 340 271 54 36 chr2 29052779 29052945 -221634909 + MER104 DNA Tc2 6 174 -6 956 261 193 27 chr2 29053592 29053905 -221633949 - L1ME3A LINE L1 -14 6156 5896 1326 149 40 4 chr2 29053905 29054133 -221633721 + MER46A DNA MER2_type 1 236 0 956 261 193 27 chr2 29054133 29054477 -221633377 - L1ME3A LINE L1 -274 5896 5390 1934 125 57 0 chr2 29054478 29054758 -221633096 - AluSx SINE Alu -16 296 1 646 227 50 12 chr2 29054758 29054999 -221632855 - L1MEc LINE L1 -3977 2268 2029 228 209 30 15 chr2 29055002 29055069 -221632785 - L1MEc LINE L1 -4441 1955 1888 1999 151 0 22 chr2 29055505 29055816 -221632038 - AluJo SINE Alu -8 304 1 285 292 97 19 chr2 29055899 29056053 -221631801 - MIR SINE MIR -83 179 14 181 356 22 22 chr2 29156699 29156789 -221531065 - L2 LINE L2 -1036 2278 2189 206 318 55 9 chr2 29157101 29157211 -221530643 + L2 LINE L2 1595 1709 -1605 219 309 82 45 chr2 29157249 29157469 -221530385 + L2 LINE L2 1698 1925 -1389 2018 135 0 3 chr2 29157650 29157953 -221529901 - AluSx SINE Alu -10 302 1 1717 116 43 53 chr2 29158006 29158307 -221529547 - AluJb SINE Alu -14 298 1 672 117 97 0 chr2 29158307 29158410 -221529444 - AluSq/x SINE Alu -177 135 23 328 295 0 0 chr2 29158413 29158491 -221529363 - MIR SINE MIR -114 148 71 207 329 41 0 chr2 29159390 29159463 -221528391 - MIR3 SINE MIR 0 208 133 479 30 0 15 chr2 29159575 29159641 -221528213 + (TG)n Simple_repeat Simple_repeat 1 65 0 461 242 139 33 chr2 29159672 29159887 -221527967 - MIR SINE MIR -4 258 21 2210 112 0 28 chr2 29161378 29161699 -221526155 + AluSx SINE Alu 1 312 0 210 316 53 11 chr2 29161715 29161810 -221526044 + MER5A DNA MER1_type 86 184 -5 186 39 0 118 chr2 29162282 29162333 -221525521 + (GGCTG)n Simple_repeat Simple_repeat 5 49 0 191 139 83 0 chr2 29163924 29163960 -221523894 + MIR SINE MIR 115 153 -55 421 224 122 0 chr2 29164287 29164394 -221523460 - MIR SINE MIR -56 152 33 4126 116 24 41 chr2 29164702 29165139 -221522715 - L1MA4 LINE L1 0 6300 5878 1839 100 90 10 chr2 29165139 29165429 -221522425 + AluSq SINE Alu 1 313 0 4126 116 24 41 chr2 29165429 29165671 -221522183 - L1MA4 LINE L1 -422 5878 5633 1015 171 104 0 chr2 29165671 29165911 -221521943 + L1 LINE L1 5101 5365 -781 251 273 157 36 chr2 29168241 29168490 -221519364 + L2 LINE L2 2600 2878 -436 396 270 169 49 chr2 29168593 29168860 -221518994 + L2 LINE L2 3014 3312 -1 537 308 66 0 chr2 29168919 29169117 -221518737 + MIR SINE MIR 52 262 0 1044 142 41 0 chr2 29169928 29170097 -221517757 - AluSg/x SINE Alu -3 307 132 2066 89 27 7 chr2 29170097 29170389 -221517465 - AluSx SINE Alu -14 298 1 264 298 48 0 chr2 29170740 29170824 -221517030 - MIR3 SINE MIR -40 168 81 686 237 54 0 chr2 29171683 29171869 -221515985 + MIR3 SINE MIR 6 201 -7 472 100 0 0 chr2 29172604 29172664 -221515190 - Alu SINE Alu -26 285 226 961 275 58 3 chr2 29172812 29173121 -221514733 + HsTC2 DNA Tc2 215 540 -1358 255 210 0 62 chr2 29173127 29173208 -221514646 + HsTC2 DNA Tc2 1822 1897 -1 433 345 125 12 chr2 29173232 29173741 -221514113 + L2 LINE L2 2487 3058 -214 621 245 173 3 chr2 29173817 29174140 -221513714 + L1ME4a LINE L1 5741 6118 -3 364 327 133 20 chr2 29175614 29175862 -221511992 + L2 LINE L2 2997 3272 0 244 296 157 26 chr2 29176051 29176166 -221511688 + L3 LINE CR1 1435 1564 -13 2070 133 0 3 chr2 29176181 29176483 -221511371 + AluSg SINE Alu 1 301 -9 519 276 65 61 chr2 29177417 29177663 -221510191 + MIR SINE MIR 10 256 -6 197 258 32 0 chr2 29178276 29178338 -221509516 - MIR3 SINE MIR -24 184 121 1554 133 115 18 chr2 29179778 29180056 -221507798 - AluSg SINE Alu -5 305 1 218 271 71 0 chr2 29180191 29180261 -221507593 + L3b LINE CR1 1285 1359 -224 288 212 68 68 chr2 29181637 29181769 -221506085 - L1ME4a LINE L1 -44 6077 5946 2238 149 48 86 chr2 29181775 29182250 -221505604 + LTR32 LTR ERVL 15 471 0 2242 94 3 0 chr2 29182337 29182635 -221505219 - AluSx SINE Alu -13 299 1 391 302 71 0 chr2 29183207 29183333 -221504521 - MIR SINE MIR 0 262 128 1118 175 0 0 chr2 29183436 29183607 -221504247 + FAM SINE Alu 2 172 -3 399 277 0 10 chr2 29183644 29183745 -221504109 - HsTC2 DNA Tc2 -1798 100 1 1824 169 0 7 chr2 29184470 29184777 -221503077 - AluJb SINE Alu -7 305 1 4543 104 38 26 chr2 29184810 29184998 -221502856 - L1PB1 LINE L1 -1 6150 5966 2458 54 0 0 chr2 29184998 29185294 -221502560 - AluY SINE Alu -15 296 1 4543 104 38 26 chr2 29185294 29185470 -221502384 - L1PB1 LINE L1 -185 5966 5794 324 0 0 0 chr2 29185470 29185506 -221502348 + (TG)n Simple_repeat Simple_repeat 2 37 0 186 43 0 0 chr2 29185506 29185529 -221502325 + (CATA)n Simple_repeat Simple_repeat 2 24 0 4543 104 38 26 chr2 29185529 29185856 -221501998 - L1PB1 LINE L1 -356 5795 5449 336 303 158 30 chr2 29185858 29186155 -221501699 + L2 LINE L2 2376 2710 -604 257 300 20 47 chr2 29186156 29186306 -221501548 + L1MC/D LINE L1 5370 5515 -2270 349 264 106 65 chr2 29186679 29187055 -221500799 + L2 LINE L2 2696 3079 -234 1184 154 41 9 chr2 29187068 29187288 -221500566 - AluJo SINE Alu -85 227 1 337 269 54 15 chr2 29187291 29187421 -221500433 + L2 LINE L2 3117 3251 -62 291 272 11 22 chr2 29188419 29188511 -221499343 + L2 LINE L2 3176 3266 -47 219 271 29 14 chr2 29188861 29188931 -221498923 + L2 LINE L2 3197 3267 -5 181 175 25 0 chr2 29189175 29189215 -221498639 - MER5A DNA MER1_type -114 75 35 307 219 85 0 chr2 29189278 29189360 -221498494 - MIR SINE MIR -66 196 108 650 188 8 16 chr2 29189441 29189569 -221498285 - MIR SINE MIR -37 225 99 236 245 0 53 chr2 29190279 29190373 -221497481 + CT-rich Low_complexity Low_complexity 2 90 0 234 293 13 0 chr2 29192245 29192320 -221495534 + (CA)n Simple_repeat Simple_repeat 1 76 0 329 321 43 33 chr2 29193245 29193429 -221494425 - MIR3 SINE MIR -6 202 17 2235 115 0 0 chr2 29193557 29193869 -221493985 + AluSx SINE Alu 1 312 0 2078 175 142 16 chr2 29194380 29194866 -221492988 + LTR10B LTR ERV1 1 547 0 198 261 62 0 chr2 29195236 29195301 -221492553 + MIR SINE MIR 83 151 -57 1995 108 41 3 chr2 29195301 29195596 -221492258 + AluSx SINE Alu 1 306 -6 530 263 94 19 chr2 29195649 29195915 -221491939 + MER113 DNA MER1_type? 30 315 -206 658 104 85 9 chr2 29195916 29196022 -221491832 + MSTA LTR MaLR 264 377 -51 358 227 85 14 chr2 29195979 29196120 -221491734 + MER113 DNA MER1_type? 261 411 -110 * 1527 210 0 13 chr2 29197061 29197375 -221490479 + AluJo SINE Alu 1 310 -2 739 276 166 14 chr2 29197671 29198191 -221489663 - L2 LINE L2 -3 3310 2709 371 208 40 64 chr2 29198228 29198353 -221489501 - L1MD3 LINE L1 -10 7985 7864 2026 279 73 18 chr2 29198353 29199202 -221488652 - L2 LINE L2 -599 2715 1820 220 323 0 0 chr2 29199230 29199292 -221488562 - L2 LINE L2 -1606 1708 1647 533 294 26 0 chr2 29199304 29199498 -221488356 - L2 LINE L2 -2363 951 753 218 213 80 40 chr2 29200804 29200879 -221486975 - MIR3 SINE MIR -17 191 114 2324 165 40 89 chr2 29200879 29201462 -221486392 + MLT2B3 LTR ERVL 1 554 0 226 308 77 0 chr2 29203120 29203211 -221484643 + MIR3 SINE MIR 108 205 -3 584 238 24 8 chr2 29203944 29204070 -221483784 - L2 LINE L2 0 3313 3186 252 0 0 0 chr2 29204716 29204744 -221483110 + (CA)n Simple_repeat Simple_repeat 2 29 0 214 286 0 0 chr2 29205723 29205772 -221482082 + L2 LINE L2 3264 3312 -1 2124 132 0 0 chr2 29206016 29206305 -221481549 + AluSx SINE Alu 1 289 -23 2194 145 0 0 chr2 29206322 29206677 -221481177 + AluSx SINE Alu 1 355 0 770 193 12 0 chr2 29208263 29208591 -221479263 + (CA)n Simple_repeat Simple_repeat 1 332 0 486 173 13 36 chr2 29208637 29208887 -221478967 + (CA)n Simple_repeat Simple_repeat 1 244 0 439 247 6 6 chr2 29208908 29209078 -221478776 + (CA)n Simple_repeat Simple_repeat 2 171 0 439 195 16 43 chr2 29209120 29209305 -221478549 + (CA)n Simple_repeat Simple_repeat 1 180 0 200 250 12 0 chr2 29209323 29209403 -221478451 + (CA)n Simple_repeat Simple_repeat 1 81 0 762 216 11 1 chr2 29209421 29210215 -221477639 + (CA)n Simple_repeat Simple_repeat 1 801 0 912 94 8 8 chr2 29210492 29210619 -221477235 + AluSq/x SINE Alu 1 127 -186 317 235 59 0 chr2 29210730 29210798 -221477056 - MIR SINE MIR -190 72 1 2066 150 192 23 chr2 29211131 29211651 -221476203 - LTR18B LTR ERVL -6 608 1 305 183 215 0 chr2 29213126 29213219 -221474635 + MER81 DNA DNA 1 113 -1 300 164 78 0 chr2 29213551 29213679 -221474175 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 1227 151 78 0 chr2 29214306 29214525 -221473329 + MER46A DNA MER2_type 1 236 0 343 257 64 46 chr2 29214549 29214658 -221473196 - MER91A DNA MER1_type 0 196 86 241 290 215 0 chr2 29214666 29214759 -221473095 - MER91A DNA MER1_type -35 161 49 185 167 71 0 chr2 29214970 29215012 -221472842 + MIR SINE MIR 66 110 -152 267 284 154 24 chr2 29215272 29215441 -221472413 - MIR SINE MIR -70 192 2 2214 109 75 31 chr2 29216640 29216989 -221470865 - THE1B LTR MaLR 0 364 1 2380 155 70 11 chr2 29217003 29217324 -221470530 - L1MB3 LINE L1 -7 6176 5817 1974 163 0 13 chr2 29217324 29217500 -221470354 - AluSx SINE Alu -3 309 137 2229 91 0 53 chr2 29217500 29217819 -221470035 - AluSg SINE Alu -8 302 1 1974 163 0 13 chr2 29217819 29217955 -221469899 - AluSx SINE Alu -175 137 1 2380 155 70 11 chr2 29217955 29218105 -221469749 - L1MB3 LINE L1 -366 5817 5677 1850 156 7 20 chr2 29218736 29219038 -221468816 + AluJb SINE Alu 11 308 -4 349 288 110 18 chr2 29219906 29220069 -221467785 - MIR SINE MIR -49 213 36 618 258 138 5 chr2 29220095 29220312 -221467542 + ORSL DNA AcHobo 9 254 -21 3196 129 46 55 chr2 29223009 29223508 -221464346 - LTR36 LTR ERV1 0 611 109 198 118 0 0 chr2 29223508 29223542 -221464312 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3798 21 5 0 chr2 29223542 29223976 -221463878 - L1PA5 LINE L1 -16 6138 5703 3196 129 46 55 chr2 29223976 29224089 -221463765 - LTR36 LTR ERV1 -500 111 4 5225 77 3 1 chr2 29224203 29224862 -221462992 + PABL_A LTR ERV1 1 660 0 588 277 6 40 chr2 29224921 29225098 -221462756 - MER5B DNA MER1_type -5 173 3 249 337 98 21 chr2 29225197 29225390 -221462464 + MIR SINE MIR 16 223 -39 232 288 29 100 chr2 29225772 29225942 -221461912 - MIR SINE MIR -79 183 26 * 481 211 184 34 chr2 29225853 29226000 -221461854 - MER5A DNA MER1_type -12 177 9 908 162 56 15 chr2 29226295 29226493 -221461361 - MER89 LTR ERV1 0 559 354 294 274 11 20 chr2 29226504 29226593 -221461261 + MER5A DNA MER1_type 13 105 -80 232 323 172 0 chr2 29226768 29226861 -221460993 + MER5A DNA MER1_type 55 163 -26 504 0 0 0 chr2 29227550 29227606 -221460248 + (TG)n Simple_repeat Simple_repeat 1 56 0 1799 141 3 58 chr2 29227751 29228064 -221459790 + AluJo SINE Alu 1 296 -16 262 317 154 0 chr2 29228888 29228992 -221458862 - MIR SINE MIR -109 153 34 208 227 23 0 chr2 29229057 29229101 -221458753 + CT-rich Low_complexity Low_complexity 1 45 0 324 305 40 68 chr2 29233010 29233187 -221454667 + MIR SINE MIR 20 191 -71 344 289 125 82 chr2 29234435 29234530 -221453324 + MIR SINE MIR 34 123 -139 2396 97 0 3 chr2 29234530 29234838 -221453016 + AluSq SINE Alu 1 307 -6 344 289 125 82 chr2 29234838 29234950 -221452904 + MIR SINE MIR 123 250 -12 2131 137 0 10 chr2 29236211 29236511 -221451343 - AluSx SINE Alu -15 297 1 708 224 14 0 chr2 29237582 29237725 -221450129 + Charlie1 DNA MER1_type 2 146 -2615 819 256 0 9 chr2 29237847 29238062 -221449792 + AluY SINE Alu 99 311 0 372 265 85 4 chr2 29238776 29238918 -221448936 + MIR SINE MIR 16 165 -63 616 275 135 14 chr2 29239139 29239346 -221448508 - MIR SINE MIR 0 262 31 1486 192 133 3 chr2 29239467 29239790 -221448064 - MLT1A1 LTR MaLR 0 365 1 2013 125 13 35 chr2 29240896 29241207 -221446647 + AluJb SINE Alu 1 304 -8 186 269 57 78 chr2 29241258 29241399 -221446455 - L2 LINE L2 -40 3273 3136 254 236 19 123 chr2 29241413 29241476 -221446378 + MER81 DNA DNA 20 69 -45 2075 112 32 35 chr2 29241476 29241790 -221446064 + AluSq SINE Alu 1 313 0 254 236 19 123 chr2 29241790 29241832 -221446022 + MER81 DNA DNA 69 114 0 471 337 17 6 chr2 29241858 29242033 -221445821 + MIR SINE MIR 76 252 -10 26 30 0 0 chr2 29242033 29242066 -221445788 + AT_rich Low_complexity Low_complexity 1 33 0 408 208 182 0 chr2 29242171 29242330 -221445524 - MER53 DNA DNA -1 188 1 2293 95 27 0 chr2 29242567 29242861 -221444993 + AluSx SINE Alu 3 304 -8 2000 163 51 43 chr2 29243776 29244157 -221443697 + MLT2A2 LTR ERVL 1 395 -159 2129 108 22 38 chr2 29244157 29244472 -221443382 - AluSx SINE Alu 0 312 3 2000 163 51 43 chr2 29244472 29244634 -221443220 + MLT2A2 LTR ERVL 395 554 0 181 372 51 26 chr2 29244895 29244973 -221442881 + L2 LINE L2 3138 3217 -55 513 156 227 0 chr2 29245001 29245129 -221442725 + L1MC2 LINE L1 6186 6342 -2 1023 112 0 14 chr2 29245253 29245396 -221442458 + AluJb SINE Alu 1 141 -171 4756 186 51 9 chr2 29245414 29247267 -221440587 + L1MC2 LINE L1 4272 6194 -150 201 74 0 0 chr2 29248738 29248765 -221439089 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1883 85 0 4 chr2 29248794 29249029 -221438825 - AluSg/x SINE Alu -9 301 68 492 272 98 8 chr2 29249722 29249957 -221437897 - LTR33 LTR ERVL -58 463 208 2579 196 36 8 chr2 29249980 29250511 -221437343 + MER50 LTR ERV1 1 546 -188 18265 25 4 0 chr2 29250512 29253413 -221434441 - L1PA3 LINE L1 0 6155 3247 1217 124 24 52 chr2 29253413 29253451 -221434403 + MER50 LTR ERV1 531 569 -165 1907 115 50 0 chr2 29253451 29253729 -221434125 - AluY SINE Alu -19 292 1 1217 124 24 52 chr2 29253729 29253900 -221433954 + MER50 LTR ERV1 569 734 0 248 248 86 9 chr2 29253940 29254045 -221433809 - LTR33 LTR ERVL -407 114 2 2102 120 0 3 chr2 29254930 29255213 -221432641 + AluSx SINE Alu 1 282 -30 273 119 0 0 chr2 29255213 29255255 -221432599 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 882 149 43 7 chr2 29255255 29255396 -221432458 + MLT1B LTR MaLR 245 390 0 1966 135 11 0 chr2 29255562 29255844 -221432010 - AluSx SINE Alu -27 285 1 241 143 24 0 chr2 29255846 29255888 -221431966 - L2 LINE L2 -1102 2212 2170 491 256 110 26 chr2 29255943 29256134 -221431720 - L1M4 LINE L1 -519 6361 6155 765 245 66 25 chr2 29256137 29256333 -221431521 - MER63A DNA MER1_type 0 210 7 1035 282 83 52 chr2 29256356 29257514 -221430340 - L1M4 LINE L1 -739 6127 4933 348 328 82 15 chr2 29257899 29258033 -221429821 + MIR SINE MIR 7 149 -113 650 303 219 21 chr2 29258951 29259462 -221428392 + L3 LINE CR1 913 1524 -53 196 259 103 0 chr2 29259549 29259607 -221428247 - L2 LINE L2 -13 3259 3196 378 264 107 98 chr2 29260107 29260866 -221426988 - L1M4 LINE L1 -5655 1194 485 609 199 29 102 chr2 29262026 29262188 -221425666 + MER3 DNA MER1_type 1 146 -63 1906 120 43 20 chr2 29262188 29262489 -221425365 - AluSx SINE Alu -4 308 1 609 199 29 102 chr2 29262489 29262532 -221425322 + MER3 DNA MER1_type 146 191 -18 281 341 166 33 chr2 29262565 29262776 -221425078 + L2 LINE L2 3034 3272 0 2169 109 0 7 chr2 29263375 29263677 -221424177 - AluSq SINE Alu -12 301 2 23 0 0 0 chr2 29263683 29263706 -221424148 + AT_rich Low_complexity Low_complexity 1 23 0 268 304 48 32 chr2 29264763 29264888 -221422966 + L2 LINE L2 3175 3301 -12 1485 104 10 0 chr2 29267504 29267706 -221420148 + AluSg/x SINE Alu 101 304 -6 665 368 105 3 chr2 29267772 29268163 -221419691 - L3 LINE CR1 -67 1510 1080 581 255 196 41 chr2 29268163 29268625 -221419229 - L2 LINE L2 -3 3310 2778 1377 241 48 16 chr2 29268821 29269199 -221418655 - L1MEc LINE L1 -4481 1915 1526 2465 211 122 12 chr2 29269230 29270007 -221417847 - L1MEc LINE L1 -4924 1472 610 227 171 0 0 chr2 29270017 29270058 -221417796 + Charlie3 DNA MER1_type 1 41 -2669 239 114 0 0 chr2 29270065 29270100 -221417754 + Charlie3 DNA MER1_type 2678 2712 0 467 246 210 31 chr2 29270101 29270325 -221417529 - L1MEc LINE L1 -5806 590 327 258 234 56 56 chr2 29270333 29270440 -221417414 + MSR1 Satellite Satellite 4 110 -1 733 280 28 40 chr2 29270441 29270691 -221417163 - L1MEc LINE L1 -6110 286 40 2210 102 0 32 chr2 29270748 29271063 -221416791 + AluSx SINE Alu 1 305 -7 914 273 32 0 chr2 29271170 29271423 -221416431 + MIR SINE MIR 2 262 0 776 216 53 98 chr2 29271437 29271793 -221416061 - MER31-int LTR ERV1 -258 4678 4339 333 145 211 13 chr2 29271795 29271871 -221415983 - LTR37A LTR ERV1 -332 94 4 619 146 48 0 chr2 29271878 29271981 -221415873 - MER31-int LTR ERV1 -691 4245 4138 4143 179 85 106 chr2 29272030 29273537 -221414317 - MER31-int LTR ERV1 -1066 4184 2411 881 215 51 68 chr2 29274052 29274100 -221413754 - MER31-int LTR ERV1 -3211 3120 3073 576 213 62 117 chr2 29274100 29274424 -221413430 - LTR57-int LTR ERVL -4246 1097 792 881 215 51 68 chr2 29274424 29274490 -221413364 - MER31-int LTR ERV1 -3258 3073 914 398 227 0 11 chr2 29275163 29275251 -221412603 - MER95 LTR ERV -76 355 269 544 248 154 16 chr2 29275760 29275961 -221411893 + MIR SINE MIR 4 231 -31 21 89 0 0 chr2 29276038 29276094 -221411760 + AT_rich Low_complexity Low_complexity 1 56 0 379 231 126 7 chr2 29277603 29277746 -221410108 - MER5C DNA MER1_type -2 322 163 1622 215 7 0 chr2 29277761 29278063 -221409791 + AluJo SINE Alu 1 304 -8 417 225 102 75 chr2 29278203 29278390 -221409464 - L1ME LINE L1 -302 5819 5628 23 0 0 0 chr2 29279027 29279050 -221408804 + AT_rich Low_complexity Low_complexity 1 23 0 1142 198 35 0 chr2 29279826 29280028 -221407826 - MER58A DNA MER1_type -15 209 1 222 311 96 85 chr2 29281324 29281617 -221406237 - L2 LINE L2 -52 3220 2925 9970 174 41 16 chr2 29281874 29284904 -221402950 - L1PA16 LINE L1 -2 6867 3770 28 0 0 0 chr2 29284904 29284932 -221402922 + AT_rich Low_complexity Low_complexity 1 28 0 7083 35 1 0 chr2 29284932 29285759 -221402095 - L1PA3 LINE L1 0 6155 5328 3411 239 41 14 chr2 29285730 29286843 -221401011 - L1PA16 LINE L1 -3037 3812 2670 * 998 219 0 0 chr2 29286852 29287053 -221400801 - L1PA16 LINE L1 -3996 2853 2653 870 251 46 80 chr2 29288051 29288462 -221399392 + L2 LINE L2 2917 3313 0 1253 62 0 38 chr2 29289389 29289549 -221398305 - L1PA7 LINE L1 0 6154 6001 1090 153 18 0 chr2 29289657 29289827 -221398027 - FRAM SINE Alu -8 168 1 271 286 12 0 chr2 29289830 29289914 -221397940 - L1M4 LINE L1 -3705 2441 2357 329 299 104 10 chr2 29290333 29290534 -221397320 - L2 LINE L2 -1579 1735 1516 2182 111 0 0 chr2 29290542 29290839 -221397015 - AluSx SINE Alu -15 297 1 646 286 104 14 chr2 29291535 29291755 -221396099 + MIR SINE MIR 11 250 -12 261 219 80 60 chr2 29291998 29292149 -221395705 - L1MC/D LINE L1 -2333 5475 5322 1361 141 70 0 chr2 29292432 29292673 -221395181 - L1MA5 LINE L1 -3 6297 6040 656 256 27 50 chr2 29293346 29293608 -221394246 - HAL1 LINE L1 -8 2499 2244 658 246 35 10 chr2 29293671 29293874 -221393980 - HAL1 LINE L1 -768 1739 1532 858 274 14 18 chr2 29293879 29294098 -221393756 - MER58A DNA MER1_type -1 223 6 273 276 60 37 chr2 29294255 29294389 -221393465 - HAL1 LINE L1 -2369 138 2 1502 113 17 13 chr2 29294698 29294929 -221392925 + L1PA13 LINE L1 5928 6159 -4 921 197 94 0 chr2 29294939 29295142 -221392712 + Charlie1 DNA MER1_type 2536 2757 -4 191 167 189 87 chr2 29295185 29295295 -221392559 + MIR3 SINE MIR 35 157 -51 1248 91 26 108 chr2 29295324 29295556 -221392298 - L1PA7 LINE L1 -2 6152 5940 394 294 81 6 chr2 29300622 29300782 -221387072 + MIR SINE MIR 41 212 -50 1652 171 16 26 chr2 29300816 29301126 -221386728 + AluJb SINE Alu 1 307 -5 323 178 22 67 chr2 29301397 29301487 -221386367 - L1ME LINE L1 -346 5775 5690 1773 229 76 18 chr2 29302210 29302777 -221385077 + L1ME2 LINE L1 5541 6140 -24 192 40 0 0 chr2 29302790 29302815 -221385039 + (CA)n Simple_repeat Simple_repeat 2 26 0 1846 184 180 24 chr2 29302902 29303353 -221384501 - MLT1F1 LTR MaLR -2 565 45 496 274 137 45 chr2 29304329 29304665 -221383189 - MLT1J1 LTR MaLR -18 428 62 6312 189 164 26 chr2 29305071 29306613 -221381241 - MER52A LTR ERV1 0 1755 1 855 243 46 57 chr2 29307573 29307652 -221380202 - L1ME1 LINE L1 -6 6160 6082 1727 131 96 10 chr2 29307652 29307966 -221379888 - MER61A LTR ERV1 -2 341 1 855 243 46 57 chr2 29307966 29308129 -221379725 - L1ME1 LINE L1 -84 6082 5921 1652 196 32 0 chr2 29308129 29308410 -221379444 - AluJo SINE Alu -18 294 5 855 243 46 57 chr2 29308410 29308537 -221379317 - L1ME1 LINE L1 -245 5921 5794 2048 137 0 3 chr2 29308550 29308842 -221379012 - AluSx SINE Alu -15 297 7 2402 70 3 0 chr2 29309242 29309540 -221378314 + AluY SINE Alu 1 299 -12 2374 157 45 21 chr2 29309727 29310210 -221377644 + L1MB5 LINE L1 5672 6166 -8 654 253 124 0 chr2 29310339 29310612 -221377242 - L1ME4a LINE L1 -212 5909 5603 577 178 71 76 chr2 29310621 29310818 -221377036 - L1MC3 LINE L1 -9 7776 7581 276 60 100 0 chr2 29310818 29310868 -221376986 - MLT2A1 LTR ERVL 0 444 390 514 64 90 14 chr2 29310873 29311305 -221376549 + (TA)n Simple_repeat Simple_repeat 1 464 0 2083 93 3 0 chr2 29311305 29311596 -221376258 - MLT2A1 LTR ERVL -152 292 1 360 72 0 87 chr2 29311596 29311665 -221376189 - L1MC3 LINE L1 -200 7585 7523 25 0 0 0 chr2 29311711 29311736 -221376118 + AT_rich Low_complexity Low_complexity 1 25 0 234 143 48 0 chr2 29311737 29311800 -221376054 + (TA)n Simple_repeat Simple_repeat 1 66 0 2012 146 0 0 chr2 29311800 29312087 -221375767 - AluJb SINE Alu -23 289 3 988 139 77 5 chr2 29312089 29312297 -221375557 - L1MC3 LINE L1 -252 7533 7311 1848 116 44 47 chr2 29312401 29312499 -221375355 - L1MA9 LINE L1 -257 6055 5958 2197 120 0 17 chr2 29312499 29312799 -221375055 - AluSx SINE Alu -17 295 1 1848 116 44 47 chr2 29312799 29313061 -221374793 - L1MA9 LINE L1 -354 5958 5696 617 153 145 0 chr2 29313071 29313195 -221374659 - FLAM_C SINE Alu -1 142 1 2565 158 27 14 chr2 29313196 29314013 -221373841 - L1MA9 LINE L1 -617 5674 4847 * 3111 128 23 7 chr2 29314006 29314563 -221373291 + L1MA9 LINE L1 4268 4833 -1313 1731 178 0 0 chr2 29314786 29315056 -221372798 + AluJb SINE Alu 24 293 -19 268 326 32 11 chr2 29315313 29315408 -221372446 - MER5B DNA MER1_type -6 172 76 2071 139 7 0 chr2 29315430 29315732 -221372122 - AluSx SINE Alu -8 304 1 1577 105 13 0 chr2 29315883 29316122 -221371732 + L1MA5A LINE L1 6041 6282 -15 21 0 0 0 chr2 29316122 29316143 -221371711 + AT_rich Low_complexity Low_complexity 1 21 0 980 238 83 52 chr2 29316374 29316911 -221370943 + L1MC5 LINE L1 7316 7874 -87 3176 152 41 11 chr2 29316911 29317445 -221370409 + MER44D DNA MER2_type 1 605 0 980 238 83 52 chr2 29317445 29317487 -221370367 + L1MC5 LINE L1 7874 7913 -48 511 250 0 9 chr2 29317516 29317628 -221370226 + L2 LINE L2 3200 3310 -3 1024 171 0 0 chr2 29317659 29317823 -221370031 + FAM SINE Alu 1 164 -11 2355 96 0 10 chr2 29317836 29318150 -221369704 + AluY SINE Alu 1 311 0 1869 98 113 0 chr2 29319161 29319435 -221368419 - AluSx SINE Alu -7 305 1 308 300 90 36 chr2 29319443 29319666 -221368188 - L1ME LINE L1 -268 5853 5619 24 32 0 0 chr2 29319753 29319784 -221368070 + AT_rich Low_complexity Low_complexity 1 31 0 213 237 0 0 chr2 29321019 29321057 -221366797 + L2 LINE L2 3149 3186 -86 493 310 35 31 chr2 29322262 29322714 -221365140 - L1ME LINE L1 -1321 4825 4372 349 296 23 81 chr2 29323326 29323633 -221364221 + L1MDb LINE L1 782 1070 -5339 1073 159 6 0 chr2 29323665 29323828 -221364026 + FRAM SINE Alu 1 162 -14 322 109 47 0 chr2 29323841 29323905 -221363949 + L1MDb LINE L1 1112 1178 -5231 673 207 22 56 chr2 29323918 29324097 -221363757 + L1MD2 LINE L1 6136 6308 -51 189 304 90 60 chr2 29324224 29324523 -221363331 + L2 LINE L2 2599 2906 -408 712 315 117 19 chr2 29326100 29326459 -221361395 - L3 LINE CR1 -850 727 334 828 210 6 6 chr2 29327281 29327443 -221360411 - FRAM SINE Alu -14 162 1 182 135 54 0 chr2 29327806 29327843 -221360011 - L3 LINE CR1 -286 1291 1253 871 156 0 15 chr2 29328073 29328208 -221359646 + FLAM_C SINE Alu 1 133 0 1050 225 4 22 chr2 29328298 29328525 -221359329 + MER58A DNA MER1_type 2 224 0 2377 80 3 0 chr2 29329483 29329782 -221358072 - AluSp SINE Alu -13 300 1 1692 205 25 53 chr2 29329958 29330432 -221357422 - LTR40b LTR ERVL -1 461 1 236 360 124 19 chr2 29331601 29331762 -221356092 - L3b LINE CR1 -55 1528 1351 259 134 63 24 chr2 29333431 29333558 -221354296 + (CA)n Simple_repeat Simple_repeat 2 133 0 21 57 0 0 chr2 29334191 29334226 -221353628 + AT_rich Low_complexity Low_complexity 1 35 0 181 326 61 45 chr2 29334290 29334422 -221353432 + L2 LINE L2 3178 3311 -2 728 243 54 27 chr2 29335120 29335548 -221352306 - L1ME LINE L1 -626 5544 5093 2531 65 3 0 chr2 29335548 29335854 -221352000 - AluY SINE Alu -4 307 1 728 243 54 27 chr2 29335854 29336026 -221351828 - L1ME LINE L1 -1077 5093 4927 3538 205 35 48 chr2 29336089 29336166 -221351688 - L1MC/D LINE L1 -784 5345 5268 1793 145 51 61 chr2 29336166 29336365 -221351489 - MLT1B LTR MaLR 0 390 195 360 0 0 0 chr2 29336365 29336405 -221351449 + (TG)n Simple_repeat Simple_repeat 2 41 0 1793 145 51 61 chr2 29336405 29336599 -221351255 - MLT1B LTR MaLR -195 195 1 3538 205 35 48 chr2 29336599 29336646 -221351208 - L1MC/D LINE L1 -861 5268 5222 4239 137 20 20 chr2 29336646 29337406 -221350448 - L1MA4 LINE L1 -5 6295 5536 3538 205 35 48 chr2 29337406 29338409 -221349445 - L1MC/D LINE L1 -907 5222 4349 385 265 26 35 chr2 29338432 29338544 -221349310 - L1MC/D LINE L1 -3819 2310 2238 2524 66 0 0 chr2 29338544 29338847 -221349007 - AluY SINE Alu -8 303 1 385 265 26 35 chr2 29338847 29338972 -221348882 - L1MC/D LINE L1 -3891 2238 2113 247 246 210 12 chr2 29339358 29339525 -221348329 - L1MC/D LINE L1 -898 1592 1381 785 283 126 27 chr2 29339601 29340227 -221347627 - L1MC/D LINE L1 -4864 1255 568 375 346 38 28 chr2 29340286 29340497 -221347357 - L1MC/D LINE L1 -5640 479 267 829 153 8 15 chr2 29341144 29341275 -221346579 - FLAM_C SINE Alu -8 135 6 2545 68 0 7 chr2 29342779 29343089 -221344765 - AluY SINE Alu -3 308 1 2021 138 3 10 chr2 29344155 29344459 -221343395 + AluSc SINE Alu 1 302 -7 1106 133 13 0 chr2 29344459 29344617 -221343237 + AluSg/x SINE Alu 134 293 -19 247 284 15 0 chr2 29344823 29344890 -221342964 + L2 LINE L2 3245 3312 -1 255 261 84 34 chr2 29345076 29345195 -221342659 - L1ME4a LINE L1 -34 6087 5963 2210 117 3 3 chr2 29345210 29345508 -221342346 - AluSq SINE Alu -15 298 1 1911 146 7 0 chr2 29345827 29346122 -221341732 - AluSx SINE Alu -15 297 1 470 339 80 5 chr2 29346473 29346697 -221341157 + MIR SINE MIR 21 261 -1 280 316 105 26 chr2 29346911 29347063 -221340791 + MIR SINE MIR 53 216 -46 21 71 0 0 chr2 29347656 29347698 -221340156 + AT_rich Low_complexity Low_complexity 1 42 0 237 211 0 0 chr2 29347858 29347910 -221339944 + (TATG)n Simple_repeat Simple_repeat 1 52 0 2077 152 53 53 chr2 29347992 29348426 -221339428 - Tigger2a DNA MER2_type 0 434 1 370 319 90 30 chr2 29349472 29349638 -221338216 - MIR3 SINE MIR -17 191 16 464 290 101 18 chr2 29351271 29351488 -221336366 + L2 LINE L2 3078 3312 -1 2213 104 0 3 chr2 29351912 29352201 -221335653 - AluSx SINE Alu -24 288 1 2760 96 3 3 chr2 29354592 29354955 -221332899 + THE1B LTR MaLR 2 364 0 1715 87 0 5 chr2 29355501 29355719 -221332135 - AluSg SINE Alu -31 279 63 1437 140 40 0 chr2 29357036 29357286 -221330568 + L1MA6 LINE L1 6041 6300 0 278 275 55 18 chr2 29360978 29361087 -221326767 - MIR3 SINE MIR 0 208 96 23 54 0 0 chr2 29361248 29361285 -221326569 + AT_rich Low_complexity Low_complexity 1 37 0 1709 110 10 63 chr2 29361528 29361827 -221326027 - AluSx SINE Alu -11 301 19 1729 125 8 12 chr2 29362509 29362765 -221325089 + AluSx SINE Alu 32 286 -26 195 170 0 0 chr2 29364740 29364787 -221323067 + (CA)n Simple_repeat Simple_repeat 2 48 0 307 272 166 26 chr2 29364950 29365215 -221322639 - L1ME4a LINE L1 -201 5920 5619 565 248 89 30 chr2 29365251 29365521 -221322333 + L2 LINE L2 2262 2547 -767 341 328 109 55 chr2 29365578 29365984 -221321870 - L1ME4a LINE L1 -485 5636 5164 2236 114 10 0 chr2 29365984 29366281 -221321573 - AluSx SINE Alu -12 300 1 341 328 109 55 chr2 29366281 29366582 -221321272 - L1ME4a LINE L1 -957 5164 4881 190 231 0 0 chr2 29367013 29367052 -221320802 - MIR SINE MIR -111 151 113 689 188 118 6 chr2 29367452 29367622 -221320232 + MER53 DNA DNA 1 189 0 247 221 0 63 chr2 29367758 29367853 -221320001 - L1MC4 LINE L1 -1339 6703 6615 * 269 267 0 0 chr2 29367802 29367892 -221319962 + L1MC4 LINE L1 6614 6703 -1339 1234 285 77 44 chr2 29368199 29368533 -221319321 + L2 LINE L2 2200 2521 -792 2128 119 17 0 chr2 29368533 29368826 -221319028 + AluSx SINE Alu 1 298 -14 1234 285 77 44 chr2 29368826 29369362 -221318492 + L2 LINE L2 2521 3106 -207 270 252 46 93 chr2 29369625 29369991 -221317863 - L1MB7 LINE L1 -243 5941 5600 672 182 208 0 chr2 29370045 29370199 -221317655 - MER5A DNA MER1_type -3 186 1 867 236 83 77 chr2 29370352 29370512 -221317342 - HAL1 LINE L1 -960 1547 1389 2256 74 40 3 chr2 29370512 29370809 -221317045 - AluSg1 SINE Alu -1 308 1 867 236 83 77 chr2 29370809 29371140 -221316714 - HAL1 LINE L1 -1118 1389 1053 * 2999 172 42 63 chr2 29371114 29371629 -221316225 - L1MC3 LINE L1 0 7785 7287 2096 123 3 0 chr2 29371629 29371914 -221315940 - AluSq SINE Alu -27 286 1 2999 172 42 63 chr2 29371914 29372091 -221315763 - L1MC3 LINE L1 -498 7287 7108 625 249 102 18 chr2 29372143 29372368 -221315486 - HAL1 LINE L1 -1476 1031 788 1655 226 74 19 chr2 29372414 29372443 -221315411 - MLT1D LTR MaLR -5 500 474 192 40 0 0 chr2 29372443 29372468 -221315386 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 1655 226 74 19 chr2 29372468 29372912 -221314942 - MLT1D LTR MaLR -31 474 1 258 311 48 42 chr2 29373037 29373204 -221314650 - HAL1 LINE L1 -2022 485 318 327 195 49 0 chr2 29373207 29373330 -221314524 + CT-rich Low_complexity Low_complexity 2 130 0 1654 175 0 0 chr2 29373333 29373596 -221314258 - AluJo SINE Alu -49 263 1 354 273 58 32 chr2 29373610 29373764 -221314090 - HAL1 LINE L1 -2220 287 130 264 59 0 0 chr2 29373801 29373835 -221314019 + (TG)n Simple_repeat Simple_repeat 2 35 0 848 198 39 11 chr2 29373879 29374061 -221313793 + MER5A DNA MER1_type 3 189 0 240 376 112 0 chr2 29375020 29375145 -221312709 - L2 LINE L2 0 3272 3134 23 0 0 0 chr2 29375938 29375961 -221311893 + AT_rich Low_complexity Low_complexity 1 23 0 2346 79 13 10 chr2 29376283 29376586 -221311268 + AluSp SINE Alu 1 304 -9 374 241 107 27 chr2 29377161 29377273 -221310581 - MIR SINE MIR -6 256 136 2068 98 0 4 chr2 29377455 29377719 -221310135 - AluSx SINE Alu -14 298 36 24 0 0 0 chr2 29377719 29377743 -221310111 + AT_rich Low_complexity Low_complexity 1 24 0 2132 99 10 0 chr2 29379717 29380009 -221307845 - AluSp SINE Alu -2 311 17 765 188 0 0 chr2 29380723 29380861 -221306993 + FLAM_C SINE Alu 2 139 -4 379 175 133 70 chr2 29381236 29381379 -221306475 + MER5B DNA MER1_type 22 173 -5 201 288 0 15 chr2 29381931 29381997 -221305857 + L2 LINE L2 3205 3269 -3 331 224 12 12 chr2 29382526 29382611 -221305243 - MIR SINE MIR -115 147 63 386 161 65 0 chr2 29383621 29383776 -221304078 + (TG)n Simple_repeat Simple_repeat 1 165 0 287 154 58 10 chr2 29383796 29383900 -221303954 + (TG)n Simple_repeat Simple_repeat 1 109 0 1229 167 47 33 chr2 29384039 29384315 -221303539 + AluSc SINE Alu 1 280 -19 310 307 166 10 chr2 29384703 29384908 -221302946 + MIR SINE MIR 5 241 -21 183 80 0 0 chr2 29384952 29384977 -221302877 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 537 255 45 44 chr2 29384994 29385248 -221302606 + MIR SINE MIR 8 262 0 224 333 0 0 chr2 29387584 29387662 -221300192 + MIR SINE MIR 75 152 -110 604 208 71 12 chr2 29387763 29387931 -221299923 - MER5B DNA MER1_type 0 178 1 587 227 33 20 chr2 29389229 29389379 -221298475 + MER103 DNA DNA 2 153 -13 512 194 37 0 chr2 29389513 29389621 -221298233 + MIR SINE MIR 80 191 -71 258 278 91 31 chr2 29390343 29390486 -221297368 + MIR3 SINE MIR 51 201 -7 207 162 0 0 chr2 29390731 29390768 -221297086 + (TTA)n Simple_repeat Simple_repeat 3 39 0 192 384 0 0 chr2 29391008 29391081 -221296773 - L2 LINE L2 -7 3265 3193 949 201 30 35 chr2 29391789 29391988 -221295866 - MER20 DNA MER1_type 0 219 22 408 275 42 0 chr2 29392082 29392202 -221295652 - L2 LINE L2 -4 3309 3185 2336 244 92 22 chr2 29392265 29393098 -221294756 - L2 LINE L2 -419 2895 2004 313 296 10 0 chr2 29393206 29393304 -221294550 + L2 LINE L2 3170 3268 -4 182 333 50 0 chr2 29393498 29393597 -221294257 - MIR SINE MIR -56 152 49 716 146 73 8 chr2 29393602 29393725 -221294129 + FLAM_C SINE Alu 2 132 -1 1464 201 0 52 chr2 29393735 29394044 -221293810 + AluJo SINE Alu 1 293 -19 1233 91 0 0 chr2 29394730 29394884 -221292970 + AluSx SINE Alu 1 154 -158 213 39 0 0 chr2 29395187 29395213 -221292641 + (A)n Simple_repeat Simple_repeat 1 26 0 1379 239 151 25 chr2 29395402 29395992 -221291862 - L1ME4a LINE L1 -65 6056 5393 2077 128 34 0 chr2 29395994 29396291 -221291563 - AluSx SINE Alu -5 307 1 243 290 80 6 chr2 29396355 29396517 -221291337 - L1ME4a LINE L1 -817 5329 5156 1378 215 36 4 chr2 29396517 29396796 -221291058 - AluJb SINE Alu -24 288 1 2297 100 3 7 chr2 29397918 29398228 -221289626 - AluSc SINE Alu 0 309 1 377 179 179 0 chr2 29398864 29398942 -221288912 + MER8 DNA MER2_type 142 233 -6 1592 185 139 37 chr2 29399213 29399667 -221288187 - MLT1D LTR MaLR -1 504 5 345 287 116 0 chr2 29400254 29400383 -221287471 + MIR SINE MIR 21 164 -98 210 294 64 9 chr2 29401073 29401182 -221286672 - MIR3 SINE MIR -16 192 78 311 252 35 52 chr2 29401592 29401707 -221286147 + MIR SINE MIR 70 182 -80 503 268 20 0 chr2 29401746 29401881 -221285973 + MER5A DNA MER1_type 1 153 -36 204 313 101 20 chr2 29402789 29402888 -221284966 - L2 LINE L2 -26 3287 3181 212 273 91 0 chr2 29402994 29403071 -221284783 + L2 LINE L2 3166 3249 -23 222 37 0 0 chr2 29404034 29404061 -221283793 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1487 171 9 101 chr2 29404174 29404502 -221283352 - AluJo SINE Alu 0 302 5 193 371 11 45 chr2 29404663 29404752 -221283102 + MIR SINE MIR 20 105 -157 1686 122 29 31 chr2 29405377 29405703 -221282151 + THE1C LTR MaLR 50 375 0 478 313 67 49 chr2 29405952 29406176 -221281678 + MIR SINE MIR 20 247 -15 254 256 77 68 chr2 29406766 29406912 -221280942 - MER5A DNA MER1_type -7 182 26 221 343 114 0 chr2 29406944 29407049 -221280805 - MIR SINE MIR -62 146 30 1727 180 25 0 chr2 29409076 29409360 -221278494 - AluJo SINE Alu -21 291 1 1883 252 104 35 chr2 29409376 29410361 -221277493 - L1MC5 LINE L1 -501 7460 6493 323 323 68 33 chr2 29410768 29411075 -221276779 - HAL1b LINE L1 -862 486 169 224 149 21 0 chr2 29411628 29411675 -221276179 + GA-rich Low_complexity Low_complexity 1 48 0 575 214 40 8 chr2 29412068 29412194 -221275660 + MIR SINE MIR 20 149 -59 334 357 40 2 chr2 29412763 29412913 -221274941 - MIR3 SINE MIR -36 172 34 180 203 40 108 chr2 29412996 29413070 -221274784 - MIR SINE MIR -108 154 86 2306 100 159 8 chr2 29413180 29413551 -221274303 + MSTA LTR MaLR 2 428 0 374 306 48 7 chr2 29414542 29414689 -221273165 + L1ME4a LINE L1 5969 6121 0 236 330 205 0 chr2 29415991 29416103 -221271751 - L2 LINE L2 -1 3271 3137 807 295 86 26 chr2 29416925 29417345 -221270509 - LTR16B LTR ERVL -2 462 18 371 293 147 13 chr2 29417906 29418056 -221269798 + MIR SINE MIR 93 262 0 682 280 196 56 chr2 29419081 29419500 -221268354 + L3 LINE CR1 800 1159 -418 2421 91 3 3 chr2 29419500 29419807 -221268047 + AluSq SINE Alu 1 307 -6 682 280 196 56 chr2 29419807 29420047 -221267807 + L3 LINE CR1 1159 1551 -26 234 81 0 0 chr2 29421003 29421040 -221266814 + (CAGGG)n Simple_repeat Simple_repeat 4 40 0 326 307 36 14 chr2 29421785 29421925 -221265929 + MIR SINE MIR 69 211 -51 1170 172 172 10 chr2 29422286 29422577 -221265277 + MER2 DNA MER2_type 1 338 -7 2238 83 20 3 chr2 29423659 29423961 -221263893 + AluSx SINE Alu 1 307 -5 238 171 98 110 chr2 29425231 29425313 -221262541 - MLT2F LTR ERVL -2 661 581 1858 191 0 10 chr2 29425724 29426038 -221261816 - AluJo SINE Alu -1 311 1 204 323 23 114 chr2 29426368 29426588 -221261266 - L2 LINE L2 -81 3191 2992 361 284 18 9 chr2 29429340 29429449 -221258405 + MIR SINE MIR 102 211 -51 228 67 0 0 chr2 29431534 29431564 -221256290 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 254 306 37 37 chr2 29431576 29431684 -221256170 - L2 LINE L2 -28 3244 3137 184 333 48 12 chr2 29431965 29432049 -221255805 + L2 LINE L2 3180 3266 -47 206 292 0 0 chr2 29432093 29432141 -221255713 + GA-rich Low_complexity Low_complexity 1 48 0 243 146 0 0 chr2 29432363 29432404 -221255450 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 369 286 79 21 chr2 29433009 29433149 -221254705 - MIR3 SINE MIR -41 167 20 198 333 52 52 chr2 29433982 29434117 -221253737 + L2 LINE L2 3119 3253 -19 623 169 0 1 chr2 29435546 29435676 -221252178 - L1MB1 LINE L1 -3 6165 6057 357 276 75 22 chr2 29436541 29436691 -221251163 + MIR SINE MIR 2 161 -47 273 303 110 0 chr2 29437456 29437565 -221250289 - MIR SINE MIR -36 226 106 928 236 23 16 chr2 29438226 29438484 -221249370 + MIR SINE MIR 3 262 0 674 248 50 0 chr2 29438593 29438754 -221249100 + MER63A DNA MER1_type 13 181 -29 301 58 39 0 chr2 29439153 29439205 -221248649 + (TG)n Simple_repeat Simple_repeat 2 55 0 245 294 0 15 chr2 29439289 29439357 -221248497 + MIR3 SINE MIR 5 71 -137 2402 81 13 7 chr2 29439597 29439904 -221247950 + AluY SINE Alu 1 309 -2 243 0 0 0 chr2 29440045 29440072 -221247782 + (TC)n Simple_repeat Simple_repeat 2 28 0 373 238 0 0 chr2 29440822 29440902 -221246952 - MER116 DNA Mariner 0 80 1 2406 99 14 91 chr2 29441414 29441856 -221245998 - LTR8 LTR ERV1 -283 408 1 256 254 130 65 chr2 29442407 29442592 -221245262 - MIR SINE MIR -36 226 30 256 265 29 69 chr2 29443745 29443847 -221244007 - MIR SINE MIR -74 188 91 719 295 40 9 chr2 29444802 29445029 -221242825 - MIR SINE MIR 0 262 29 186 200 55 73 chr2 29445218 29445273 -221242581 + MIR SINE MIR 159 212 -50 608 179 237 32 chr2 29445935 29446091 -221241763 + MER5A DNA MER1_type 1 188 -1 372 236 225 7 chr2 29446695 29446847 -221241007 + MIR SINE MIR 20 204 -58 224 263 34 68 chr2 29447606 29447724 -221240130 + MIR SINE MIR 107 220 -42 822 274 93 68 chr2 29447858 29448466 -221239388 - L1ME4a LINE L1 -3 6118 5527 396 0 0 0 chr2 29448466 29448510 -221239344 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1761 146 0 57 chr2 29448512 29448813 -221239041 - AluJb SINE Alu -28 284 1 822 274 93 68 chr2 29448813 29448846 -221239008 - L1ME4a LINE L1 -594 5527 5458 384 123 0 74 chr2 29448854 29448935 -221238919 - MADE1 DNA Mariner -5 75 1 190 393 41 8 chr2 29449009 29449131 -221238723 + L2 LINE L2 2941 3066 -206 281 246 18 88 chr2 29449286 29449400 -221238454 - MLT1G LTR MaLR -475 115 10 182 212 0 0 chr2 29449519 29449552 -221238302 - L2 LINE L2 -18 3295 3263 350 264 28 38 chr2 29450004 29450110 -221237744 - MIR3 SINE MIR -22 186 82 1732 157 33 52 chr2 29450112 29450417 -221237437 + AluJo SINE Alu 1 299 -13 2350 91 0 13 chr2 29450441 29450749 -221237105 + AluY SINE Alu 1 304 -7 1785 161 33 14 chr2 29451010 29451371 -221236483 - L1MB2 LINE L1 0 6171 5804 672 171 0 36 chr2 29451371 29451511 -221236343 - L1MB2 LINE L1 -578 5593 5459 915 183 0 43 chr2 29451995 29452159 -221235695 - FRAM SINE Alu -9 157 1 575 319 80 17 chr2 29452559 29452860 -221234994 - L2 LINE L2 0 3313 2994 220 318 0 0 chr2 29452959 29453025 -221234829 + MIR SINE MIR 188 253 -9 326 334 140 14 chr2 29453781 29454311 -221233543 + L2 LINE L2 2449 3044 -269 2076 113 0 4 chr2 29454320 29454595 -221233259 - AluSx SINE Alu -16 296 23 287 270 164 40 chr2 29454816 29454968 -221232886 - L2 LINE L2 -13 3259 3089 307 326 7 43 chr2 29455921 29456059 -221231795 - MER5A DNA MER1_type 0 189 57 434 280 48 8 chr2 29456132 29456257 -221231597 - MIR3 SINE MIR -68 140 11 207 327 0 0 chr2 29457783 29457835 -221230019 + polypyrimidine Low_complexity Low_complexity 2 53 0 243 0 0 0 chr2 29458380 29458407 -221229447 + (TG)n Simple_repeat Simple_repeat 2 28 0 207 200 0 22 chr2 29458438 29458483 -221229371 + GA-rich Low_complexity Low_complexity 4 47 0 201 258 0 97 chr2 29460123 29460185 -221227669 - MIR3 SINE MIR -2 206 151 192 125 0 0 chr2 29460590 29460622 -221227232 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 263 283 81 10 chr2 29461605 29461704 -221226150 - MIR SINE MIR -28 234 129 22 0 0 0 chr2 29462576 29462598 -221225256 + AT_rich Low_complexity Low_complexity 1 22 0 450 309 128 5 chr2 29463263 29463467 -221224387 - MIR SINE MIR -32 230 2 2361 94 10 0 chr2 29464376 29464684 -221223170 - AluY SINE Alu 0 311 1 219 336 46 23 chr2 29464719 29464850 -221223004 - MIR SINE MIR -57 151 18 3053 118 43 4 chr2 29464925 29465393 -221222461 + LTR19A LTR ERV1 1 486 0 201 133 0 0 chr2 29465627 29465657 -221222197 + (TGGA)n Simple_repeat Simple_repeat 4 33 0 244 311 33 0 chr2 29465963 29466053 -221221801 - MIR SINE MIR -118 144 52 474 272 0 0 chr2 29466158 29466261 -221221593 + MER5A DNA MER1_type 4 106 -83 219 36 0 0 chr2 29466373 29466401 -221221453 + (TG)n Simple_repeat Simple_repeat 2 29 0 198 314 183 15 chr2 29467045 29467182 -221220672 + L3 LINE CR1 1298 1457 -120 289 226 25 63 chr2 29467689 29467848 -221220006 + L1ME4a LINE L1 5969 6121 0 519 216 201 22 chr2 29467867 29468135 -221219719 + L1ME4a LINE L1 5803 6118 -3 317 331 106 0 chr2 29468366 29468508 -221219346 + MIR SINE MIR 100 256 -6 231 238 95 0 chr2 29468725 29468788 -221219066 + MIR SINE MIR 83 151 -111 267 278 0 42 chr2 29469816 29469888 -221217966 - MIR SINE MIR -158 104 36 503 272 178 0 chr2 29469915 29470095 -221217759 + MIR SINE MIR 35 246 -16 228 228 0 0 chr2 29474186 29474243 -221213611 + (TG)n Simple_repeat Simple_repeat 1 57 0 180 0 0 0 chr2 29474749 29474769 -221213085 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 1831 150 19 26 chr2 29475468 29475775 -221212079 - AluSx SINE Alu -7 305 1 1680 130 7 55 chr2 29475786 29476094 -221211760 - AluSx SINE Alu -19 293 1 334 294 34 45 chr2 29476630 29476807 -221211047 - MER5B DNA MER1_type 0 178 4 445 169 12 27 chr2 29477175 29477279 -221210575 + MLT1J1 LTR MaLR 28 130 -279 285 286 71 32 chr2 29478046 29478200 -221209654 + MLT1J2 LTR MaLR 280 439 -11 2225 97 0 3 chr2 29478904 29479242 -221208612 + AluSx SINE Alu 3 312 0 366 298 76 8 chr2 29479248 29479379 -221208475 + MIR SINE MIR 53 192 -70 240 269 90 0 chr2 29480418 29480485 -221207369 + MIR SINE MIR 94 166 -96 1853 150 32 35 chr2 29481312 29481625 -221206229 + AluJo SINE Alu 1 312 0 626 238 18 12 chr2 29481723 29481891 -221205963 + MIR SINE MIR 93 261 -1 436 265 73 0 chr2 29482790 29482941 -221204913 + MARNA DNA Mariner 9 170 -416 321 360 20 0 chr2 29483540 29483640 -221204214 - L2 LINE L2 -2 3270 3169 612 266 30 12 chr2 29484917 29485086 -221202768 - MIR SINE MIR -71 191 20 2132 140 0 0 chr2 29486466 29486773 -221201081 - AluSx SINE Alu -5 307 1 201 292 79 0 chr2 29487434 29487523 -221200331 + L2 LINE L2 3168 3263 -9 404 167 19 19 chr2 29488351 29488459 -221199395 + GA-rich Low_complexity Low_complexity 2 109 0 608 214 101 36 chr2 29488557 29488725 -221199129 + MIR SINE MIR 84 262 0 532 301 14 7 chr2 29490081 29490227 -221197627 - MIR SINE MIR -108 154 8 192 299 0 46 chr2 29490325 29490412 -221197442 + L3b LINE CR1 1137 1219 -364 239 233 132 82 chr2 29490860 29491021 -221196833 + MIR3 SINE MIR 2 170 -62 236 237 17 17 chr2 29491382 29491441 -221196413 + MIR SINE MIR 17 75 -133 397 256 0 0 chr2 29491490 29491580 -221196274 - MER96 DNA MER1_type? -85 90 1 645 272 28 11 chr2 29491584 29491764 -221196090 + MIR SINE MIR 68 250 -12 377 269 24 46 chr2 29492468 29492620 -221195234 + MIR SINE MIR 36 183 -62 310 328 57 23 chr2 29492854 29493031 -221194823 - MIR3 SINE MIR -24 184 2 188 176 0 0 chr2 29493641 29493675 -221194179 + L2 LINE L2 3257 3290 -23 210 200 20 20 chr2 29493711 29493761 -221194093 + L2 LINE L2 3262 3311 -2 247 250 13 13 chr2 29494044 29494120 -221193734 + GA-rich Low_complexity Low_complexity 4 79 0 2064 106 51 0 chr2 29496038 29496311 -221191543 + AluSx SINE Alu 1 287 -25 206 295 16 0 chr2 29496900 29496961 -221190893 - MIR SINE MIR -56 152 91 393 293 45 51 chr2 29497364 29497521 -221190333 + MIR SINE MIR 12 167 -95 502 223 8 62 chr2 29498334 29498464 -221189390 - MIR3 SINE MIR -39 169 47 318 302 174 7 chr2 29498525 29498674 -221189180 + MIR3 SINE MIR 10 183 -25 210 209 23 0 chr2 29501579 29501622 -221186232 - L2 LINE L2 -1 3312 3269 346 270 155 29 chr2 29501638 29501812 -221186042 + MIR SINE MIR 10 205 -57 2342 97 0 19 chr2 29502474 29502782 -221185072 + AluSx SINE Alu 1 302 -10 249 273 124 41 chr2 29503553 29503674 -221184180 + L2 LINE L2 3137 3267 -5 217 391 16 0 chr2 29504200 29504264 -221183590 - L2 LINE L2 -92 3180 3116 2460 90 0 0 chr2 29504442 29504743 -221183111 + AluSq SINE Alu 1 301 -12 5153 136 14 28 chr2 29505014 29506246 -221181608 + L1PA16 LINE L1 4925 6151 -15 449 150 0 62 chr2 29506342 29506422 -221181432 + MER5A DNA MER1_type 1 75 -114 2201 112 3 0 chr2 29506422 29506709 -221181145 + AluSg SINE Alu 1 288 -22 421 242 199 25 chr2 29507273 29507434 -221180420 - MER5A DNA MER1_type 0 189 1 22 0 0 0 chr2 29508021 29508043 -221179811 + AT_rich Low_complexity Low_complexity 1 22 0 197 244 81 58 chr2 29509064 29509150 -221178704 - L2 LINE L2 -32 3240 3153 768 295 51 17 chr2 29509234 29509471 -221178383 - MIR SINE MIR -16 246 2 2447 70 7 7 chr2 29510290 29510590 -221177264 - AluY SINE Alu -11 300 1 799 289 77 35 chr2 29511083 29511460 -221176394 + L3 LINE CR1 1112 1504 -73 192 276 0 35 chr2 29512271 29512329 -221175525 + MIR SINE MIR 89 144 -118 227 240 0 0 chr2 29512360 29512410 -221175444 + L2 LINE L2 3223 3272 0 558 283 11 13 chr2 29513041 29513208 -221174646 - MIR3 SINE MIR -67 141 9 766 242 72 92 chr2 29513387 29513722 -221174132 + MLT1I LTR MaLR 74 401 -8 2121 108 0 0 chr2 29514487 29514786 -221173068 + AluSq SINE Alu 14 312 0 486 299 32 13 chr2 29514954 29515111 -221172743 + MIR SINE MIR 33 192 -70 510 240 122 5 chr2 29515843 29516006 -221171848 + MER5A DNA MER1_type 4 189 0 357 208 78 58 chr2 29516297 29516451 -221171403 + L1ME4a LINE L1 5961 6117 -4 397 237 191 8 chr2 29517291 29517422 -221170432 - MIR SINE MIR 0 262 108 669 271 55 25 chr2 29517562 29517798 -221170056 + MIR SINE MIR 13 255 -7 305 303 0 46 chr2 29518201 29518310 -221169544 + MIR SINE MIR 42 145 -117 448 167 58 58 chr2 29519290 29519410 -221168444 + L1MB8 LINE L1 5413 5532 -642 925 155 96 46 chr2 29519417 29519656 -221168198 + L1MB8 LINE L1 5928 6178 0 267 306 20 27 chr2 29519970 29520117 -221167737 + HAL1b LINE L1 313 458 -890 2110 139 10 0 chr2 29520637 29520946 -221166908 + AluSx SINE Alu 1 312 0 318 184 141 8 chr2 29523743 29523866 -221163988 + MLT1L LTR MaLR 211 435 -180 621 297 81 0 chr2 29524505 29524714 -221163140 + L2 LINE L2 3083 3308 -5 217 320 0 0 chr2 29524991 29525069 -221162785 + (CA)n Simple_repeat Simple_repeat 1 78 0 2167 142 7 0 chr2 29525090 29525400 -221162454 - AluSx SINE Alu 0 312 1 2324 89 10 20 chr2 29525788 29526115 -221161739 + AluSq SINE Alu 1 313 0 255 290 48 90 chr2 29526632 29526777 -221161077 - MIR SINE MIR -47 215 77 1766 252 91 27 chr2 29526984 29527532 -221160322 + MLT1E LTR MaLR 6 588 -5 307 277 0 24 chr2 29528567 29528650 -221159204 + L2 LINE L2 3184 3264 -8 394 250 101 26 chr2 29528828 29528975 -221158879 + MIR SINE MIR 26 172 -36 525 264 123 33 chr2 29528982 29529194 -221158660 - MIR SINE MIR -30 232 2 305 208 113 42 chr2 29530356 29530468 -221157386 + MIR SINE MIR 66 189 -19 205 200 44 0 chr2 29530443 29530488 -221157366 + L2 LINE L2 3207 3253 -19 * 518 238 26 79 chr2 29530579 29530768 -221157086 - MER5A DNA MER1_type -4 185 7 364 165 10 10 chr2 29532191 29532288 -221155566 + GA-rich Low_complexity Low_complexity 2 98 0 198 279 231 27 chr2 29532918 29533065 -221154789 + MIR SINE MIR 7 183 -79 1442 272 21 12 chr2 29536974 29537401 -221150453 + L1MB7 LINE L1 5745 6175 -9 205 270 48 16 chr2 29540196 29540259 -221147595 + MIR SINE MIR 31 95 -167 208 275 114 69 chr2 29544598 29544729 -221143125 - L2 LINE L2 -1018 2296 2160 1750 121 22 104 chr2 29595154 29595509 -221092345 + MSTA LTR MaLR 103 428 0 361 313 38 92 chr2 29595696 29596118 -221091736 - L2 LINE L2 -276 3037 2633 191 204 68 0 chr2 29596703 29596747 -221091107 + MIR3 SINE MIR 111 157 -51 297 333 114 23 chr2 29596751 29596883 -221090971 - MER5A DNA MER1_type -2 187 44 356 267 198 0 chr2 29596938 29597054 -221090800 + MER5A DNA MER1_type 45 183 -6 5953 35 3 0 chr2 29598580 29599244 -221088610 + L1PA4 LINE L1 5490 6155 0 259 211 256 33 chr2 29600346 29600436 -221087418 - MIR3 SINE MIR -2 206 97 2849 282 75 20 chr2 29600462 29601854 -221086000 + L2 LINE L2 1838 3311 -2 219 69 0 0 chr2 29601862 29601891 -221085963 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 208 349 91 15 chr2 29602176 29602308 -221085546 + L2 LINE L2 2555 2696 -618 394 220 58 64 chr2 29602624 29602797 -221085057 + MER113 DNA MER1_type? 44 215 -306 204 270 0 0 chr2 29602945 29603008 -221084846 + L2 LINE L2 2911 2973 -299 319 256 85 8 chr2 29603033 29603153 -221084701 - HAL1 LINE L1 0 2507 2373 2129 128 0 25 chr2 29603153 29603511 -221084343 - L1MB3 LINE L1 0 6183 5835 1418 272 13 15 chr2 29603533 29604007 -221083847 - HAL1 LINE L1 -684 1823 1351 252 148 0 0 chr2 29604021 29604052 -221083802 + (TG)n Simple_repeat Simple_repeat 1 34 -20 240 35 0 0 chr2 29604052 29604081 -221083773 + (GA)n Simple_repeat Simple_repeat 1 29 0 252 148 0 0 chr2 29604081 29604103 -221083751 + (TG)n Simple_repeat Simple_repeat 33 54 0 392 270 82 25 chr2 29604196 29604355 -221083499 - HAL1 LINE L1 -1606 901 734 895 238 31 0 chr2 29605056 29605249 -221082605 - MER21B LTR ERV1 -664 199 1 292 234 234 0 chr2 29606441 29606535 -221081319 + MER91C DNA MER1_type 2 117 -23 4023 193 48 8 chr2 29607269 29608099 -221079755 + MER21B LTR ERV1 1 863 0 293 326 174 20 chr2 29608288 29608484 -221079370 + MIR SINE MIR 29 254 -8 1879 146 14 0 chr2 29608614 29608889 -221078965 + AluSx SINE Alu 1 279 -33 300 261 157 17 chr2 29609004 29609119 -221078735 - MIR3 SINE MIR -64 144 14 290 207 135 9 chr2 29610897 29611008 -221076846 + L1ME1 LINE L1 6024 6148 -18 248 261 43 29 chr2 29611097 29611166 -221076688 + MIR3 SINE MIR 128 197 -11 860 279 34 0 chr2 29611347 29611555 -221076299 - MIR SINE MIR -5 257 43 311 327 116 8 chr2 29612087 29612258 -221075596 + MIR3 SINE MIR 3 188 -62 194 330 11 0 chr2 29613101 29613189 -221074665 + MIR SINE MIR 48 136 -72 330 206 0 0 chr2 29614570 29614643 -221073211 - MSTB2 LTR MaLR 0 457 385 206 248 41 50 chr2 29615438 29615559 -221072295 + GA-rich Low_complexity Low_complexity 1 120 0 572 339 62 18 chr2 29615912 29616136 -221071718 - MIR SINE MIR -21 241 8 473 276 153 15 chr2 29616391 29616587 -221071267 - MIR SINE MIR -37 225 3 1928 161 3 7 chr2 29616736 29617046 -221070808 - AluSx SINE Alu -3 309 1 349 283 55 55 chr2 29617687 29617832 -221070022 + L2 LINE L2 3169 3313 0 240 191 21 0 chr2 29618249 29618296 -221069558 + CT-rich Low_complexity Low_complexity 1 48 0 198 368 84 25 chr2 29619299 29619538 -221068316 + L2 LINE L2 2612 2864 -450 189 306 159 19 chr2 29619581 29619738 -221068116 - MIR SINE MIR -8 254 76 1814 168 47 0 chr2 29619823 29620121 -221067733 - AluJo SINE Alu 0 312 1 204 280 40 0 chr2 29620327 29620377 -221067477 + L2 LINE L2 3200 3251 -21 495 363 106 3 chr2 29620859 29621162 -221066692 - L3 LINE CR1 -1050 527 194 238 355 62 47 chr2 29621229 29621440 -221066414 - L3b LINE CR1 -12 1571 1358 290 267 56 11 chr2 29621448 29621538 -221066316 + MIR3 SINE MIR 13 106 -102 2899 144 35 1 chr2 29621552 29622126 -221065728 - L1MA4 LINE L1 -7 6346 5728 * 8552 201 43 10 chr2 29622123 29623551 -221064303 - L1MA4 LINE L1 -1968 4360 2980 2589 79 37 8 chr2 29623551 29623905 -221063949 - THE1B LTR MaLR 0 364 1 8552 201 43 10 chr2 29623905 29626693 -221061161 - L1MA4 LINE L1 -3348 2980 1 30 77 0 0 chr2 29626718 29626783 -221061071 + AT_rich Low_complexity Low_complexity 1 65 0 17965 27 2 0 chr2 29627010 29629925 -221057929 - L1PA3 LINE L1 0 6155 3236 400 251 120 87 chr2 29629925 29630200 -221057654 - L1ME4a LINE L1 -141 6478 6195 268 326 22 0 chr2 29630472 29630561 -221057293 + MIR SINE MIR 56 146 -116 648 213 0 8 chr2 29630733 29630860 -221056994 - FLAM_C SINE Alu -17 126 1 3088 226 81 14 chr2 29630865 29631952 -221055902 - L1ME4a LINE L1 -820 5824 4665 507 100 0 40 chr2 29632035 29632135 -221055719 + (TCCCC)n Simple_repeat Simple_repeat 2 97 0 4718 249 54 54 chr2 29632159 29635812 -221052042 - L1M4c LINE L1 -2036 4608 883 1926 171 7 0 chr2 29635860 29636158 -221051696 - 7SLRNA srpRNA srpRNA -20 300 1 2314 122 0 0 chr2 29637929 29638240 -221049614 + AluSx SINE Alu 1 311 -1 212 271 59 12 chr2 29639134 29639219 -221048635 - MIR3 SINE MIR -39 169 81 180 367 46 18 chr2 29639630 29639739 -221048115 + MIR SINE MIR 10 121 -141 310 321 27 27 chr2 29639749 29639861 -221047993 - L2 LINE L2 -10 3262 3151 1529 170 132 62 chr2 29640528 29640982 -221046872 - MLT1D LTR MaLR 0 505 20 504 224 135 26 chr2 29641331 29641487 -221046367 - MIR3 SINE MIR -21 187 15 528 279 86 10 chr2 29642388 29642772 -221045082 - L1ME4a LINE L1 -2 6119 5707 243 237 65 21 chr2 29643283 29643376 -221044478 + Charlie7 DNA MER1_type 2515 2611 -1 1528 251 33 15 chr2 29644477 29644931 -221042923 + MLT1C LTR MaLR 6 467 0 938 297 27 33 chr2 29646979 29647219 -221040635 + L1ME3A LINE L1 5419 5656 -514 1906 113 44 118 chr2 29647219 29647583 -221040271 - MER1B DNA MER1_type 0 337 1 938 297 27 33 chr2 29647583 29647793 -221040061 + L1ME3A LINE L1 5656 5866 -304 357 324 28 21 chr2 29648091 29648233 -221039621 + MER5B DNA MER1_type 31 173 -5 399 21 0 0 chr2 29648241 29648289 -221039565 + (CA)n Simple_repeat Simple_repeat 2 49 0 281 320 10 0 chr2 29648640 29648743 -221039111 + MIR SINE MIR 33 136 -72 830 191 5 31 chr2 29649195 29649389 -221038465 + MER53 DNA DNA 1 189 0 307 320 27 39 chr2 29650153 29650332 -221037522 + MIR SINE MIR 6 185 -70 6663 56 11 29 chr2 29650395 29651378 -221036476 + L1PA7 LINE L1 5189 6154 0 187 54 54 0 chr2 29651762 29651799 -221036055 + A-rich Low_complexity Low_complexity 37 75 0 810 113 0 0 chr2 29651802 29651917 -221035937 + L1PA8 LINE L1 6056 6170 -2 240 364 25 0 chr2 29654101 29654219 -221033635 - MIR SINE MIR -36 226 106 249 324 47 20 chr2 29654761 29654909 -221032945 + MIR3 SINE MIR 52 203 -5 2266 94 7 0 chr2 29655098 29655397 -221032457 + AluSp SINE Alu 1 301 -12 415 314 89 0 chr2 29656537 29656706 -221031148 - MIR SINE MIR -10 252 69 2534 109 17 3 chr2 29657422 29657781 -221030073 - THE1B LTR MaLR 0 364 1 188 282 51 13 chr2 29659665 29659743 -221028111 + MIR SINE MIR 60 140 -68 2330 84 0 0 chr2 29659791 29660075 -221027779 + AluSx SINE Alu 22 305 -7 417 20 0 0 chr2 29660075 29660125 -221027729 + (TA)n Simple_repeat Simple_repeat 2 51 0 441 355 27 18 chr2 29660422 29660642 -221027212 + MIR SINE MIR 13 234 -28 512 264 86 0 chr2 29660881 29661021 -221026833 + MIR3 SINE MIR 46 197 -11 496 275 37 63 chr2 29661592 29661781 -221026073 - MIR3 SINE MIR -9 199 16 495 0 0 0 chr2 29661810 29661865 -221025989 + (TG)n Simple_repeat Simple_repeat 2 56 0 235 184 20 0 chr2 29662847 29662896 -221024958 + L3 LINE CR1 1455 1504 -73 2101 128 0 3 chr2 29662915 29663203 -221024651 - AluSx SINE Alu -25 287 1 295 224 156 19 chr2 29663536 29663709 -221024145 + MIR SINE MIR 5 197 -11 2423 94 5 77 chr2 29664786 29665178 -221022676 + THE1B LTR MaLR 1 364 0 354 45 0 0 chr2 29665327 29665371 -221022483 + (TG)n Simple_repeat Simple_repeat 1 44 0 1839 153 18 0 chr2 29665371 29665645 -221022209 - AluSx SINE Alu -33 279 1 195 312 141 54 chr2 29666098 29666396 -221021458 + L2 LINE L2 2933 3256 -16 228 316 10 0 chr2 29666601 29666699 -221021155 + (TCTCTG)n Simple_repeat Simple_repeat 3 101 0 2112 211 45 11 chr2 29667750 29668196 -221019658 - MLT1C LTR MaLR 0 467 7 26 0 0 0 chr2 29668578 29668604 -221019250 + AT_rich Low_complexity Low_complexity 1 26 0 219 201 19 6 chr2 29670257 29670318 -221017536 - MIR SINE MIR -61 147 109 227 208 42 0 chr2 29671105 29671153 -221016701 + HSMAR1 DNA Mariner 3 52 -1235 2268 70 0 85 chr2 29671697 29672025 -221015829 + AluY SINE Alu 1 300 -11 261 353 33 0 chr2 29673443 29673565 -221014289 - MIR SINE MIR -37 225 100 219 232 29 14 chr2 29673678 29673747 -221014107 + GA-rich Low_complexity Low_complexity 1 70 0 634 314 32 20 chr2 29674291 29674539 -221013315 - MIR SINE MIR -3 259 9 1784 275 193 12 chr2 29675955 29676943 -221010911 + L2 LINE L2 943 2109 -1205 1514 259 194 16 chr2 29677379 29678337 -221009517 + L2 LINE L2 2155 3312 -1 215 269 62 97 chr2 29678363 29678508 -221009346 + MIR SINE MIR 65 204 -58 203 293 0 13 chr2 29679438 29679513 -221008341 + MIR3 SINE MIR 134 207 -1 278 286 79 0 chr2 29680079 29680205 -221007649 + L2 LINE L2 2924 3059 -213 319 221 187 1 chr2 29681562 29681670 -221006184 - MIR SINE MIR -62 146 60 245 327 58 26 chr2 29682210 29682378 -221005476 + MIR SINE MIR 44 214 -48 224 382 65 12 chr2 29682614 29682784 -221005070 - MIR3 SINE MIR -4 204 26 510 284 57 26 chr2 29682914 29683108 -221004746 - MIR SINE MIR -6 256 57 258 319 44 0 chr2 29683109 29683222 -221004632 - L2 LINE L2 0 3272 3155 207 342 17 25 chr2 29683343 29683463 -221004391 - L2 LINE L2 -190 3082 2964 295 207 58 0 chr2 29684068 29684155 -221003699 + GA-rich Low_complexity Low_complexity 4 95 0 384 208 47 28 chr2 29684572 29684678 -221003176 - L1ME4a LINE L1 -30 6091 5984 2058 166 14 17 chr2 29687344 29687705 -221000149 + MLT1A1 LTR MaLR 3 362 -3 690 306 20 28 chr2 29688180 29688428 -220999426 + MIR SINE MIR 17 262 0 368 342 0 0 chr2 29689116 29689233 -220998621 + L3 LINE CR1 183 299 -1278 338 322 25 0 chr2 29689449 29689567 -220998287 + L1ME4a LINE L1 5357 5477 -2331 47 53 0 0 chr2 29689571 29689646 -220998208 + AT_rich Low_complexity Low_complexity 1 75 0 27 29 0 0 chr2 29689710 29689744 -220998110 + AT_rich Low_complexity Low_complexity 1 34 0 183 129 0 0 chr2 29690222 29690253 -220997601 + (TAG)n Simple_repeat Simple_repeat 1 31 0 659 293 50 25 chr2 29690253 29690333 -220997521 - MIR SINE MIR 0 262 185 2494 133 5 8 chr2 29690333 29690709 -220997145 + THE1C LTR MaLR 1 375 0 659 293 50 25 chr2 29690709 29690867 -220996987 - MIR SINE MIR -77 185 18 643 223 211 4 chr2 29690895 29691160 -220996694 + L1ME4a LINE L1 5786 6105 -16 208 292 31 31 chr2 29691412 29691477 -220996377 + L2 LINE L2 3206 3270 -2 208 208 97 69 chr2 29691474 29691546 -220996308 + L3 LINE CR1 626 699 -878 522 287 84 48 chr2 29691627 29692090 -220995764 + L1ME4a LINE L1 5584 6063 -58 324 359 55 13 chr2 29692228 29692465 -220995389 + L3 LINE CR1 926 1172 -405 210 256 39 93 chr2 29692906 29693035 -220994819 - L2 LINE L2 0 3272 3151 1855 168 6 19 chr2 29693724 29694039 -220993815 + AluJo SINE Alu 1 311 -1 2174 116 0 7 chr2 29694046 29694347 -220993507 + AluSc SINE Alu 1 299 -10 232 285 76 62 chr2 29694378 29694522 -220993332 + MIR SINE MIR 47 192 -70 284 313 0 30 chr2 29695066 29695232 -220992622 + GA-rich Low_complexity Low_complexity 2 162 0 * 398 262 24 0 chr2 29695108 29695234 -220992620 + (CAGA)n Simple_repeat Simple_repeat 2 130 0 2735 152 83 25 chr2 29695430 29695489 -220992365 + L1MC1 LINE L1 5774 5828 -505 2197 131 0 6 chr2 29695489 29695803 -220992051 + AluSx SINE Alu 1 312 0 2735 152 83 25 chr2 29695803 29696270 -220991584 + L1MC1 LINE L1 5828 6331 -2 267 340 11 0 chr2 29697207 29697301 -220990553 + MIR3 SINE MIR 93 187 -21 295 331 33 0 chr2 29698890 29699011 -220988843 - MIR3 SINE MIR -24 184 60 1078 194 97 0 chr2 29699119 29699336 -220988518 - MLT1G1 LTR MaLR 0 595 358 505 183 0 0 chr2 29699386 29699468 -220988386 - AluJb SINE Alu -28 284 203 819 250 57 55 chr2 29699468 29699781 -220988073 - MLT1F1 LTR MaLR -250 280 1 378 280 119 31 chr2 29699874 29700067 -220987787 - MIR SINE MIR -14 248 39 307 319 158 19 chr2 29700357 29700617 -220987237 + L2 LINE L2 2977 3272 0 716 271 19 23 chr2 29700742 29701004 -220986850 - MIR SINE MIR 0 262 2 223 301 132 42 chr2 29701739 29701952 -220985902 - L3 LINE CR1 -7 1570 1339 242 284 0 30 chr2 29702341 29702408 -220985446 + L2 LINE L2 3233 3297 -16 202 270 0 48 chr2 29702408 29702471 -220985383 - L3b LINE CR1 -7 1576 1517 479 252 161 0 chr2 29703159 29703314 -220984540 - MER5A DNA MER1_type 0 189 10 242 313 9 35 chr2 29703348 29703463 -220984391 - MER5A DNA MER1_type -28 161 50 1893 117 4 0 chr2 29703522 29703779 -220984075 - AluSx SINE Alu -19 293 36 868 253 0 5 chr2 29703882 29704068 -220983786 - MER5A DNA MER1_type 0 189 5 1557 136 27 27 chr2 29704890 29705148 -220982706 - MER7C DNA MER2_type -1 602 345 1309 181 0 0 chr2 29705150 29705360 -220982494 + AluJo SINE Alu 1 210 -102 879 59 0 0 chr2 29705400 29705518 -220982336 + (GGAA)n Simple_repeat Simple_repeat 1 118 0 224 292 0 31 chr2 29705522 29705552 -220982302 + GA-rich Low_complexity Low_complexity 3 32 -33 2092 103 0 24 chr2 29705552 29705843 -220982011 + AluSg SINE Alu 1 284 -26 224 292 0 31 chr2 29705843 29705877 -220981977 + GA-rich Low_complexity Low_complexity 32 65 0 2064 140 35 6 chr2 29705877 29706220 -220981634 - MER7C DNA MER2_type -248 354 2 239 167 21 0 chr2 29706728 29706776 -220981078 - MIR SINE MIR -111 151 103 1389 163 139 39 chr2 29706847 29707108 -220980746 + MER47A DNA MER2_type 2 304 -2019 2729 32 3 0 chr2 29707108 29707417 -220980437 - AluY SINE Alu -1 310 1 1389 163 139 39 chr2 29707417 29707486 -220980368 + MER47A DNA MER2_type 304 365 -1 310 327 10 10 chr2 29708823 29708927 -220978927 - MIR3 SINE MIR -93 115 12 1174 195 0 0 chr2 29709271 29709484 -220978370 + AluJo SINE Alu 95 307 0 184 311 44 23 chr2 29710389 29710509 -220977345 - MIR3 SINE MIR -31 231 106 552 306 63 66 chr2 29710870 29711203 -220976651 + L2 LINE L2 2887 3218 -54 583 327 142 13 chr2 29711284 29711299 -220976555 - L2 LINE L2 -2 3311 3299 2203 98 20 14 chr2 29711299 29711596 -220976258 - AluSx SINE Alu -13 299 1 583 327 142 13 chr2 29711596 29712030 -220975824 - L2 LINE L2 -14 3299 2804 447 247 105 6 chr2 29712077 29712233 -220975621 - MIR SINE MIR -32 176 2 406 200 33 0 chr2 29712247 29712337 -220975517 - MER53 DNA DNA -1 188 96 249 57 0 0 chr2 29712355 29712390 -220975464 + (TG)n Simple_repeat Simple_repeat 2 36 0 210 228 53 0 chr2 29712405 29712462 -220975392 - L2 LINE L2 -513 2801 2742 568 206 0 75 chr2 29712462 29712622 -220975232 - MER58C DNA MER1_type 0 215 68 1865 139 7 4 chr2 29712775 29713048 -220974806 - AluSx SINE Alu -7 305 32 234 150 0 0 chr2 29714186 29714226 -220973628 + (CGTG)n Simple_repeat Simple_repeat 4 43 0 264 250 0 0 chr2 29714936 29715000 -220972854 + (CA)n Simple_repeat Simple_repeat 2 65 0 616 275 34 24 chr2 29715040 29715247 -220972607 + MIR SINE MIR 42 250 -12 2497 70 0 3 chr2 29717576 29717878 -220969976 + AluSc SINE Alu 1 301 -8 640 238 48 6 chr2 29717880 29718048 -220969806 + MIR SINE MIR 28 202 -60 568 239 161 0 chr2 29719085 29719265 -220968589 - MER63A DNA MER1_type -1 209 1 207 286 0 0 chr2 29719282 29719345 -220968509 - L2 LINE L2 0 3272 3210 2461 127 77 10 chr2 29719592 29719993 -220967861 + MSTA LTR MaLR 1 428 0 827 171 0 0 chr2 29720251 29720380 -220967474 - FLAM_C SINE Alu -3 130 2 27 0 0 0 chr2 29720405 29720432 -220967422 + AT_rich Low_complexity Low_complexity 1 27 0 834 190 85 35 chr2 29720537 29720737 -220967117 + MER63A DNA MER1_type 1 210 0 307 327 113 6 chr2 29720807 29720975 -220966879 - L1ME LINE L1 -266 5855 5670 243 354 16 8 chr2 29721386 29721513 -220966341 + L2 LINE L2 3137 3264 -8 356 241 139 38 chr2 29721864 29722022 -220965832 - MIR SINE MIR -10 252 79 470 255 0 10 chr2 29722154 29722256 -220965598 - MER81 DNA DNA -13 101 1 27 0 0 0 chr2 29723452 29723479 -220964375 + AT_rich Low_complexity Low_complexity 1 27 0 312 120 0 0 chr2 29723479 29723529 -220964325 + (TG)n Simple_repeat Simple_repeat 1 50 0 2182 144 0 0 chr2 29723591 29723903 -220963951 - AluJb SINE Alu 0 312 1 2178 277 76 33 chr2 29724534 29725602 -220962252 + HAL1 LINE L1 97 1251 -1256 667 169 0 22 chr2 29725641 29725825 -220962029 + (CA)n Simple_repeat Simple_repeat 1 180 0 402 254 0 0 chr2 29725836 29725978 -220961876 + (CA)n Simple_repeat Simple_repeat 2 143 0 2423 234 80 100 chr2 29725978 29726296 -220961558 + HAL1 LINE L1 1261 1584 -923 2373 75 0 19 chr2 29726296 29726603 -220961251 - AluY SINE Alu -10 301 1 2423 234 80 100 chr2 29726603 29727548 -220960306 + HAL1 LINE L1 1584 2499 -8 1359 186 134 3 chr2 29727748 29728003 -220959851 - MER63C DNA MER1_type -713 347 44 189 0 0 0 chr2 29728003 29728024 -220959830 + (CA)n Simple_repeat Simple_repeat 2 22 0 1359 186 134 3 chr2 29728024 29728075 -220959779 - MER63C DNA MER1_type -1016 44 1 215 270 106 74 chr2 29729225 29729414 -220958440 - MIR SINE MIR -48 214 20 300 293 12 0 chr2 29729956 29730038 -220957816 + L3 LINE CR1 1485 1567 -10 191 86 0 29 chr2 29730309 29730344 -220957510 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 589 201 176 25 chr2 29730385 29730589 -220957265 + MIR SINE MIR 15 249 -13 231 36 0 0 chr2 29730995 29731023 -220956831 + (A)n Simple_repeat Simple_repeat 1 28 0 1182 166 0 0 chr2 29731420 29731595 -220956259 + AluJb SINE Alu 137 311 -1 299 298 199 7 chr2 29732433 29732574 -220955280 - MER5A DNA MER1_type -13 176 9 267 295 39 0 chr2 29733272 29733350 -220954504 + (CGTG)n Simple_repeat Simple_repeat 4 84 0 2530 65 0 3 chr2 29733643 29733951 -220953903 + AluY SINE Alu 1 307 -4 241 321 93 29 chr2 29735781 29735921 -220951933 - L2 LINE L2 -1 3271 3123 251 348 30 18 chr2 29738618 29738782 -220949072 + MIR3 SINE MIR 36 201 -7 272 190 13 0 chr2 29738822 29738901 -220948953 + GA-rich Low_complexity Low_complexity 1 80 0 2111 117 4 4 chr2 29739183 29739506 -220948348 + AluSx SINE Alu 1 323 0 423 0 0 0 chr2 29740682 29740729 -220947125 + (CA)n Simple_repeat Simple_repeat 2 48 0 2134 112 0 14 chr2 29741542 29741864 -220945990 - AluY SINE Alu 0 318 1 195 228 0 88 chr2 29742041 29742098 -220945756 - L2 LINE L2 -28 3244 3193 378 42 0 0 chr2 29743785 29743833 -220944021 + (TG)n Simple_repeat Simple_repeat 1 48 0 192 211 96 0 chr2 29743903 29743955 -220943899 - MIR SINE MIR -1 261 205 490 289 70 0 chr2 29744477 29744633 -220943221 - MER5B DNA MER1_type -7 171 5 275 276 46 35 chr2 29744652 29744739 -220943115 + MIR3 SINE MIR 109 196 -12 2216 114 0 0 chr2 29745364 29745653 -220942201 - AluSx SINE Alu -23 289 1 3967 30 9 0 chr2 29745938 29746403 -220941451 + L1PA7 LINE L1 5681 6149 -5 202 216 0 0 chr2 29746504 29746541 -220941313 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 14645 130 33 25 chr2 29747394 29749788 -220938066 - Tigger1 DNA MER2_type -5 2413 1 204 40 0 0 chr2 29749947 29749972 -220937882 + (CA)n Simple_repeat Simple_repeat 2 26 0 689 286 65 74 chr2 29749972 29750420 -220937434 + L1ME4a LINE L1 5367 5810 -311 244 256 12 0 chr2 29750512 29750594 -220937260 + L1ME4a LINE L1 5969 6051 -70 441 169 0 0 chr2 29751725 29751808 -220936046 + (CA)n Simple_repeat Simple_repeat 2 84 0 520 309 20 0 chr2 29752281 29752433 -220935421 + L2 LINE L2 3117 3271 -1 196 121 0 0 chr2 29752520 29752553 -220935301 + L2 LINE L2 3271 3303 -10 6792 50 28 2 chr2 29953574 29954985 -220732869 - L1PA7 LINE L1 -13 6141 4748 1263 150 106 0 chr2 29956583 29956829 -220731025 + L1MA4 LINE L1 6017 6288 -12 22 35 0 0 chr2 29957166 29957195 -220730659 + AT_rich Low_complexity Low_complexity 1 29 0 362 271 0 9 chr2 29957357 29957464 -220730390 + L2 LINE L2 2192 2297 -1017 316 309 87 20 chr2 29957518 29957667 -220730187 + MLT1J LTR MaLR 7 165 -346 756 324 8 12 chr2 29957707 29957957 -220729897 + MLT1J LTR MaLR 254 502 -9 25 0 0 0 chr2 29958134 29958159 -220729695 + AT_rich Low_complexity Low_complexity 1 25 0 239 355 0 0 chr2 29958159 29958235 -220729619 + MIR SINE MIR 40 115 -93 700 339 33 0 chr2 29958239 29958481 -220729373 + MIR SINE MIR 12 261 -1 298 333 74 24 chr2 29959034 29959231 -220728623 + MIR SINE MIR 1 203 -59 626 256 99 29 chr2 29959755 29959997 -220727857 + MIR SINE MIR 4 262 0 193 378 37 0 chr2 29959999 29960081 -220727773 + MIR SINE MIR 64 148 -114 346 312 110 23 chr2 29961949 29962122 -220725732 - MER5A DNA MER1_type -1 188 1 21 0 0 0 chr2 29964019 29964040 -220723814 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 29964352 29964390 -220723464 + AT_rich Low_complexity Low_complexity 1 38 0 344 387 7 14 chr2 29964443 29964585 -220723269 - MIR3 SINE MIR -28 180 40 2263 42 0 0 chr2 29968329 29968591 -220719263 - AluY SINE Alu -16 295 34 691 333 93 30 chr2 29969932 29970392 -220717462 + L2 LINE L2 2825 3313 0 757 306 35 23 chr2 29970488 29970746 -220717108 - MIR SINE MIR -1 261 1 1780 139 10 45 chr2 29970979 29971267 -220716587 - AluSx SINE Alu -34 278 1 2311 93 0 3 chr2 29971539 29971851 -220716003 + AluY SINE Alu 1 311 0 202 372 32 21 chr2 29971858 29971952 -220715902 + L2 LINE L2 3151 3245 -27 7167 57 0 3 chr2 29972611 29973696 -220714158 - L1PA6 LINE L1 0 6154 5071 2174 48 0 0 chr2 29973697 29973967 -220713887 + L1PA6 LINE L1 4799 5068 -1078 261 0 0 0 chr2 29974005 29974034 -220713820 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 894 94 0 51 chr2 29974060 29974198 -220713656 - FLAM_C SINE Alu -1 132 2 27 62 0 0 chr2 29974367 29974415 -220713439 + AT_rich Low_complexity Low_complexity 1 48 0 2218 109 20 3 chr2 29974549 29974909 -220712945 + AluSx SINE Alu 3 367 0 368 315 28 0 chr2 29975303 29975411 -220712443 + L2 LINE L2 3203 3313 0 412 226 17 17 chr2 29976195 29976310 -220711544 + L1MC5 LINE L1 7810 7924 -37 578 310 114 41 chr2 29976559 29976927 -220710927 + MLT1L LTR MaLR 126 520 -95 37 39 0 0 chr2 29976938 29976989 -220710865 + AT_rich Low_complexity Low_complexity 1 51 0 2471 83 3 0 chr2 29977333 29977645 -220710209 + AluSp SINE Alu 1 313 0 2061 123 13 7 chr2 29978161 29978471 -220709383 - AluSq SINE Alu -1 312 1 2262 94 3 7 chr2 29978480 29978787 -220709067 - AluY SINE Alu -5 306 1 244 290 0 54 chr2 29979838 29979931 -220707923 - L2 LINE L2 -55 3258 3171 448 250 113 86 chr2 29980177 29980268 -220707586 - LTR33 LTR ERVL -246 275 188 2591 39 0 13 chr2 29980268 29980579 -220707275 - AluY SINE Alu -1 310 4 448 250 113 86 chr2 29980579 29980743 -220707111 - LTR33 LTR ERVL -333 188 13 1676 185 4 0 chr2 29980882 29981211 -220706643 - AluJb SINE Alu 0 330 1 2128 110 7 3 chr2 29982101 29982402 -220705452 + AluSx SINE Alu 1 302 -10 257 350 43 8 chr2 29982512 29982629 -220705225 - L2 LINE L2 -16 3297 3177 848 231 0 0 chr2 29983755 29983915 -220703939 + MER5B DNA MER1_type 1 160 -18 279 256 154 0 chr2 29984034 29984151 -220703703 + L1ME4a LINE L1 5588 5722 -399 330 286 95 49 chr2 29984172 29984476 -220703378 + L1ME4a LINE L1 5789 6106 -15 336 328 16 32 chr2 29984531 29984656 -220703198 + L2 LINE L2 3150 3272 0 314 321 7 29 chr2 29984661 29984801 -220703053 + L2 LINE L2 2626 2762 -552 210 351 79 40 chr2 29984852 29985054 -220702800 + L2 LINE L2 2871 3080 -192 245 104 62 0 chr2 29985083 29985131 -220702723 + (TTATA)n Simple_repeat Simple_repeat 3 53 0 207 72 21 93 chr2 29985146 29985243 -220702611 + (TTA)n Simple_repeat Simple_repeat 1 90 0 254 277 121 0 chr2 29985257 29985340 -220702514 - MER87 LTR ERV1 -72 469 377 40036 71 13 2 chr2 29985575 29991659 -220696195 - L1PA6 LINE L1 -2 6152 4 30 45 0 0 chr2 29991661 29991705 -220696149 + AT_rich Low_complexity Low_complexity 1 44 0 449 336 43 17 chr2 29991849 29992081 -220695773 + L2 LINE L2 2649 2886 -428 21 0 0 0 chr2 29992567 29992588 -220695266 + AT_rich Low_complexity Low_complexity 1 21 0 2018 118 3 38 chr2 29992591 29992905 -220694949 + AluSq SINE Alu 1 303 -10 2276 101 0 7 chr2 29993037 29993335 -220694519 + AluSc SINE Alu 1 296 -13 30 0 0 0 chr2 29993805 29993835 -220694019 + AT_rich Low_complexity Low_complexity 1 30 0 243 208 69 14 chr2 29994269 29994341 -220693513 + L1MEd LINE L1 1142 1217 -4902 * 285 311 105 22 chr2 29994310 29994538 -220693316 + HAL1 LINE L1 1282 1528 -962 324 0 0 0 chr2 29994561 29994597 -220693257 + (TA)n Simple_repeat Simple_repeat 1 36 0 1263 157 108 18 chr2 29994765 29995204 -220692650 - MER21B LTR ERV1 -364 499 1 19455 178 29 18 chr2 29995204 29998851 -220689003 - MER21A-int LTR ERV1 0 4191 506 319 159 48 0 chr2 29998851 29998914 -220688940 - MER50 LTR ERV1 -23 711 646 * 2869 155 19 4 chr2 29998912 29999376 -220688478 - MER50 LTR ERV1 -263 471 1 3080 156 18 12 chr2 29999376 29999882 -220687972 - MER21A-int LTR ERV1 -3682 509 1 2729 169 41 35 chr2 29999882 30000266 -220687588 - MER21A LTR ERV1 0 931 542 2044 148 0 3 chr2 30000266 30000571 -220687283 + AluSx SINE Alu 1 304 -8 2729 169 41 35 chr2 30000571 30000700 -220687154 - MER21A LTR ERV1 -389 542 415 25 51 0 0 chr2 30001009 30001048 -220686806 + AT_rich Low_complexity Low_complexity 1 39 0 1830 175 0 0 chr2 30001900 30002197 -220685657 - AluSx SINE Alu -15 297 1 2366 99 0 3 chr2 30002351 30002663 -220685191 + AluSq SINE Alu 1 311 -2 261 308 13 0 chr2 30003498 30003576 -220684278 + MIR SINE MIR 74 152 -110 2818 123 25 7 chr2 30003676 30004108 -220683746 - MER4C LTR ERV1 -25 440 1 4303 92 82 8 chr2 30004512 30005112 -220682742 + LTR9B LTR ERV1 1 644 0 2343 99 0 0 chr2 30006234 30006537 -220681317 + AluSq SINE Alu 1 303 -10 2147 132 0 0 chr2 30006723 30007027 -220680827 - AluSx SINE Alu -8 304 1 318 259 172 0 chr2 30007028 30007144 -220680710 - MIR SINE MIR -45 217 82 1843 154 28 0 chr2 30007148 30007434 -220680420 + AluJo SINE Alu 1 294 -18 2220 90 3 7 chr2 30007438 30007728 -220680126 + AluSg SINE Alu 1 289 -21 28 29 0 0 chr2 30008305 30008340 -220679514 + AT_rich Low_complexity Low_complexity 1 35 0 231 227 0 53 chr2 30008389 30008464 -220679390 - MLT1J2 LTR MaLR 0 450 380 1628 128 31 0 chr2 30008554 30008811 -220679043 + L1MA5A LINE L1 6008 6272 -25 465 274 86 35 chr2 30008825 30009022 -220678832 - MLT1J1 LTR MaLR -243 207 1 268 229 36 48 chr2 30010301 30010384 -220677470 - MLT1J1 LTR MaLR 0 446 365 236 345 36 14 chr2 30010541 30010680 -220677174 + MIR SINE MIR 34 175 -87 821 279 60 97 chr2 30010707 30011241 -220676613 - LTR67 LTR ERVL -2 555 42 708 178 16 31 chr2 30011368 30011490 -220676364 + FLAM_A SINE Alu 5 126 -176 207 0 0 0 chr2 30011490 30011513 -220676341 + (TTAAA)n Simple_repeat Simple_repeat 2 24 0 264 62 0 0 chr2 30011581 30011613 -220676241 + U2 snRNA snRNA 5 36 -152 27 22 0 22 chr2 30011629 30011640 -220676214 + AT_rich Low_complexity Low_complexity 1 11 -33 2382 60 0 23 chr2 30011640 30011941 -220675913 - AluY SINE Alu -17 294 1 27 22 0 22 chr2 30011941 30011974 -220675880 + AT_rich Low_complexity Low_complexity 11 44 0 180 0 0 0 chr2 30012365 30012385 -220675469 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 2153 119 3 6 chr2 30012512 30012823 -220675031 + AluSx SINE Alu 1 310 -2 464 306 174 30 chr2 30014322 30014787 -220673067 - L1ME2 LINE L1 -293 5871 5337 264 218 59 59 chr2 30014977 30015079 -220672775 - MLT1H1 LTR MaLR -15 540 283 228 351 88 6 chr2 30016056 30016227 -220671627 - HAL1 LINE L1 -769 1738 1554 1170 229 108 16 chr2 30016250 30016565 -220671289 - MER2 DNA MER2_type 0 344 1 27 49 0 0 chr2 30017687 30017728 -220670126 + AT_rich Low_complexity Low_complexity 1 41 0 806 195 69 19 chr2 30018500 30018659 -220669195 - FRAM SINE Alu -4 172 6 1054 88 0 7 chr2 30019212 30019348 -220668506 + AluSq/x SINE Alu 1 135 -177 2275 93 0 16 chr2 30019348 30019658 -220668196 + AluSx SINE Alu 1 305 -7 1954 121 10 7 chr2 30019900 30020198 -220667656 + AluSx SINE Alu 1 299 -13 382 270 0 0 chr2 30020337 30020426 -220667428 + L1ME LINE L1 5531 5619 -502 250 247 49 25 chr2 30020568 30020649 -220667205 + LTR67 LTR ERVL 96 178 -379 1985 112 24 17 chr2 30022131 30022418 -220665436 + AluSx SINE Alu 1 289 -23 250 246 31 0 chr2 30022431 30022496 -220665358 + MIR SINE MIR 138 204 -58 1998 177 18 24 chr2 30022641 30022980 -220664874 - MER1B DNA MER1_type 0 337 1 2206 108 0 0 chr2 30022990 30023285 -220664569 - AluSg1 SINE Alu -14 295 1 22 56 0 0 chr2 30023629 30023665 -220664189 + AT_rich Low_complexity Low_complexity 1 36 0 398 263 116 66 chr2 30023687 30023885 -220663969 - MIR SINE MIR -27 235 28 2159 138 0 0 chr2 30024003 30024315 -220663539 - AluSx SINE Alu 0 312 1 2069 94 45 7 chr2 30024327 30024615 -220663239 - AluSp SINE Alu -14 299 1 1317 189 124 4 chr2 30024618 30024877 -220662977 - AluJo SINE Alu -8 294 5 340 323 30 8 chr2 30024883 30025016 -220662838 + MER5A DNA MER1_type 54 189 0 225 170 213 0 chr2 30025889 30025936 -220661918 - MIR SINE MIR -65 143 87 1682 171 0 49 chr2 30025975 30026188 -220661666 - AluJb SINE Alu 0 312 119 3323 98 50 25 chr2 30026188 30026668 -220661186 - LTR22B LTR ERVK 0 492 1 1682 171 0 49 chr2 30026668 30026782 -220661072 - AluJb SINE Alu -193 119 1 1866 141 63 167 chr2 30027040 30027259 -220660595 - LTR36 LTR ERV1 0 611 371 1611 109 5 9 chr2 30027259 30027479 -220660375 - L1PA8A LINE L1 0 6131 5913 1866 141 63 167 chr2 30027479 30027857 -220659997 - LTR36 LTR ERV1 -240 371 76 1982 125 65 46 chr2 30027857 30028225 -220659629 - THE1C LTR MaLR 0 375 1 9390 150 4 48 chr2 30028225 30029505 -220658349 - THE1C-int LTR MaLR 0 1580 387 2283 98 0 7 chr2 30029505 30029802 -220658052 + AluY SINE Alu 1 295 -16 9390 150 4 48 chr2 30029802 30030170 -220657684 - THE1C-int LTR MaLR -1193 387 4 1586 146 68 89 chr2 30030173 30030556 -220657298 - THE1C LTR MaLR 0 375 1 445 73 12 61 chr2 30030557 30030639 -220657215 - LTR36 LTR ERV1 -533 78 1 296 319 178 0 chr2 30031019 30031182 -220656672 - L2 LINE L2 -948 2366 2175 1804 205 22 64 chr2 30031941 30032395 -220655459 - MER63B DNA MER1_type -1 435 1 962 192 15 30 chr2 30032619 30032817 -220655037 + MLT1A1 LTR MaLR 1 195 -170 633 204 0 0 chr2 30032873 30032981 -220654873 - FRAM SINE Alu -5 171 64 998 217 0 39 chr2 30033037 30033267 -220654587 - AluJo SINE Alu -17 295 75 1188 126 6 0 chr2 30033303 30033477 -220654377 - MER4A LTR ERV1 -489 175 1 363 296 32 65 chr2 30033574 30033760 -220654094 - MIR SINE MIR -80 182 3 180 0 0 0 chr2 30034093 30034113 -220653741 + (TGG)n Simple_repeat Simple_repeat 1 20 0 409 167 132 35 chr2 30034956 30035070 -220652784 - LTR33 LTR ERVL 0 521 397 1561 210 10 62 chr2 30035084 30035474 -220652380 - MLT1A2 LTR MaLR -4 370 1 393 299 96 37 chr2 30035477 30035664 -220652190 - LTR33 LTR ERVL -165 356 159 1816 125 18 11 chr2 30035809 30036115 -220651739 + AluSx SINE Alu 1 308 0 2179 114 3 3 chr2 30036165 30036463 -220651391 + AluSx SINE Alu 1 298 -14 649 228 96 96 chr2 30036565 30036929 -220650925 + Charlie8 DNA MER1_type 1889 2252 -165 1876 202 27 60 chr2 30037106 30037306 -220650548 - MER31B LTR ERV1 0 466 261 1074 241 103 57 chr2 30037306 30037355 -220650499 - MLT1A1 LTR MaLR 0 365 320 2199 99 3 3 chr2 30037355 30037675 -220650179 - AluSx SINE Alu 0 320 1 1074 241 103 57 chr2 30037675 30037973 -220649881 - MLT1A1 LTR MaLR -45 320 1 1876 202 27 60 chr2 30037973 30038252 -220649602 - MER31B LTR ERV1 -205 261 3 860 204 183 11 chr2 30038252 30038526 -220649328 - L1ME1 LINE L1 -80 6086 5766 2762 211 84 52 chr2 30038530 30038688 -220649166 - L1ME1 LINE L1 -524 5640 5488 1715 177 13 7 chr2 30038688 30038993 -220648861 - AluJb SINE Alu -2 310 4 2762 211 84 52 chr2 30038993 30039909 -220647945 - L1ME1 LINE L1 -676 5488 4539 2449 165 14 32 chr2 30040067 30040411 -220647443 - L1MB1 LINE L1 -1 6167 5831 1862 158 7 3 chr2 30040411 30040721 -220647133 - AluSx SINE Alu -1 311 1 2449 165 14 32 chr2 30040721 30040819 -220647035 - L1MB1 LINE L1 -337 5831 5733 1216 160 41 37 chr2 30040819 30041055 -220646799 + L1MB1 LINE L1 5481 5720 -614 350 294 96 23 chr2 30041295 30041472 -220646382 - MIR SINE MIR -68 194 5 1701 175 0 14 chr2 30041607 30041904 -220645950 - AluJb SINE Alu -19 293 1 1153 100 18 12 chr2 30042126 30042296 -220645558 - MER4B LTR ERV1 0 610 440 320 83 150 17 chr2 30042290 30042350 -220645504 - MER4A LTR ERV1 -596 68 1 * 452 236 24 16 chr2 30042355 30042482 -220645372 - L1MC5 LINE L1 -105 7856 7729 2080 113 11 3 chr2 30042501 30042785 -220645069 - AluSx SINE Alu -26 286 1 209 83 28 0 chr2 30042897 30042933 -220644921 + (TG)n Simple_repeat Simple_repeat 2 38 0 1387 143 37 82 chr2 30042985 30043279 -220644575 + AluJo SINE Alu 11 291 -21 313 149 6 23 chr2 30043617 30043692 -220644162 + AluSc SINE Alu 1 39 -260 1642 77 5 0 chr2 30043692 30043901 -220643953 + AluSc SINE Alu 84 293 -16 183 80 0 0 chr2 30044631 30044656 -220643198 + (CGG)n Simple_repeat Simple_repeat 3 27 0 290 282 220 48 chr2 30045349 30045576 -220642278 + L3 LINE CR1 1299 1564 -13 22 56 0 0 chr2 30046423 30046459 -220641395 + AT_rich Low_complexity Low_complexity 1 36 0 196 286 0 0 chr2 30047263 30047312 -220640542 + L2 LINE L2 3149 3197 -75 2645 187 30 31 chr2 30047477 30048017 -220639837 - MER44D DNA MER2_type -11 594 1 1385 160 94 0 chr2 30048048 30048292 -220639562 - AluJb SINE Alu -45 267 1 241 136 0 0 chr2 30048313 30048357 -220639497 - LTR66 LTR ERVL -173 437 394 898 186 167 0 chr2 30048400 30048604 -220639250 - Tigger3(Golem) DNA MER2_type -1 3028 2791 31 26 0 0 chr2 30048990 30049028 -220638826 + AT_rich Low_complexity Low_complexity 1 38 0 1675 173 25 7 chr2 30049395 30049672 -220638182 - AluJb SINE Alu -30 282 1 410 250 50 43 chr2 30049861 30050001 -220637853 + Charlie8 DNA MER1_type 87 227 -2190 24 41 0 20 chr2 30050632 30050650 -220637204 + AT_rich Low_complexity Low_complexity 1 18 -30 1612 103 22 9 chr2 30050650 30050882 -220636972 + AluSq SINE Alu 63 297 -16 24 41 0 20 chr2 30050882 30050912 -220636942 + AT_rich Low_complexity Low_complexity 18 48 0 2224 94 0 16 chr2 30050924 30051232 -220636622 + AluSx SINE Alu 1 303 -9 355 266 201 32 chr2 30052035 30052189 -220635665 + MLT1G LTR MaLR 208 387 -203 180 0 0 0 chr2 30052190 30052210 -220635644 + (CCCCAG)n Simple_repeat Simple_repeat 4 23 0 292 202 263 18 chr2 30052220 30052334 -220635520 + MLT1G LTR MaLR 414 590 0 667 213 142 11 chr2 30052750 30052933 -220634921 - MER58C DNA MER1_type 0 215 9 1895 216 168 26 chr2 30054691 30055333 -220632521 - L1MC4 LINE L1 -7 8035 7303 1771 151 4 4 chr2 30055585 30055857 -220631997 - AluSx SINE Alu -40 272 1 21 0 0 0 chr2 30056016 30056037 -220631817 + AT_rich Low_complexity Low_complexity 1 21 0 477 231 0 0 chr2 30057116 30057263 -220630591 + GA-rich Low_complexity Low_complexity 1 147 0 254 105 11 84 chr2 30058373 30058468 -220629386 + (TA)n Simple_repeat Simple_repeat 1 88 0 27 29 0 0 chr2 30058606 30058640 -220629214 + AT_rich Low_complexity Low_complexity 1 34 0 222 222 44 0 chr2 30058805 30058850 -220629004 - MER5A DNA MER1_type -102 87 41 823 154 0 0 chr2 30059491 30059621 -220628233 - FLAM_C SINE Alu -3 130 1 444 315 77 40 chr2 30059850 30060072 -220627782 + MIR SINE MIR 33 262 0 263 191 16 0 chr2 30061798 30061861 -220625993 + (TATG)n Simple_repeat Simple_repeat 3 66 0 1329 131 34 0 chr2 30063171 30063377 -220624477 - MER2 DNA MER2_type -132 213 1 1505 185 82 27 chr2 30065313 30065643 -220622211 + MER7A DNA MER2_type 1 346 0 189 241 56 19 chr2 30066555 30066609 -220621245 + MIR SINE MIR 90 145 -63 21 36 0 0 chr2 30066708 30066736 -220621118 + AT_rich Low_complexity Low_complexity 1 28 0 367 267 56 0 chr2 30066771 30066861 -220620993 + MER5A DNA MER1_type 7 101 -88 1078 68 0 0 chr2 30067106 30067239 -220620615 - AluSp/q SINE Alu -10 303 171 2062 132 0 0 chr2 30067339 30067620 -220620234 - AluSx SINE Alu -31 281 1 878 257 79 13 chr2 30067631 30068145 -220619709 - L1M4b LINE L1 -3662 3903 3358 1793 228 39 22 chr2 30069820 30070390 -220617464 - L1M4b LINE L1 -5610 1857 1241 969 318 86 29 chr2 30070472 30070915 -220616939 - L1M4b LINE L1 -6383 1084 617 315 142 7 0 chr2 30071318 30071393 -220616461 - Alu SINE Alu -260 39 1 1385 151 36 79 chr2 30071732 30072036 -220615818 - AluJo SINE Alu -11 291 1 433 208 18 86 chr2 30072232 30072453 -220615401 + AluSx SINE Alu 3 208 -104 3273 65 0 0 chr2 30072557 30072974 -220614880 + L1PA5 LINE L1 5738 6154 0 196 300 43 29 chr2 30073633 30073703 -220614151 - L2 LINE L2 -27 3245 3175 925 195 0 14 chr2 30073735 30073945 -220613909 - AluY SINE Alu -1 310 104 4277 228 71 16 chr2 30074110 30075526 -220612328 - L1 LINE L1 -1486 4660 3168 239 233 96 0 chr2 30075539 30075612 -220612242 - L1 LINE L1 -3006 3140 3061 * 324 234 66 29 chr2 30075596 30075768 -220612086 - L1 LINE L1 -3427 2719 2537 1732 131 24 23 chr2 30075991 30076328 -220611526 - MER4A LTR ERV1 -6 658 263 520 134 31 21 chr2 30076328 30076425 -220611429 - MER4A LTR ERV1 -566 98 1 1912 168 37 59 chr2 30076458 30077004 -220610850 - MER4B LTR ERV1 -4 706 195 364 303 3 31 chr2 30077158 30077343 -220610511 + C-rich Low_complexity Low_complexity 1 179 0 1302 236 0 0 chr2 30077972 30078260 -220609594 + AluSx SINE Alu 6 293 -19 610 194 30 37 chr2 30079175 30079309 -220608545 + FLAM_C SINE Alu 1 133 0 24 53 0 0 chr2 30080038 30080076 -220607778 + AT_rich Low_complexity Low_complexity 1 38 0 31 0 0 0 chr2 30081223 30081254 -220606600 + AT_rich Low_complexity Low_complexity 1 31 0 909 138 7 0 chr2 30081274 30081412 -220606442 - AluSq/x SINE Alu -173 139 1 22 0 0 0 chr2 30084780 30084802 -220603052 + AT_rich Low_complexity Low_complexity 1 22 0 2076 94 0 34 chr2 30086450 30086747 -220601107 + AluSx SINE Alu 1 287 -25 248 299 52 10 chr2 30086880 30086977 -220600877 + MIR SINE MIR 41 141 -121 305 333 8 8 chr2 30087008 30087125 -220600729 - L2 LINE L2 -14 3299 3183 25 0 0 0 chr2 30087511 30087536 -220600318 + AT_rich Low_complexity Low_complexity 1 25 0 1624 176 32 0 chr2 30087623 30087907 -220599947 - AluJo SINE Alu -19 293 1 973 248 32 16 chr2 30087935 30088181 -220599673 + MIR SINE MIR 10 259 -3 33 25 0 0 chr2 30090426 30090466 -220597388 + AT_rich Low_complexity Low_complexity 1 40 0 244 281 8 8 chr2 30090612 30090733 -220597121 + (CAGAGA)n Simple_repeat Simple_repeat 5 125 0 229 314 116 33 chr2 30092346 30092467 -220595387 + MIR3 SINE MIR 42 172 -36 258 261 29 0 chr2 30092602 30092671 -220595183 - MIR SINE MIR -143 119 49 1570 114 134 4 chr2 30092738 30092992 -220594862 - AluSx SINE Alu -25 287 1 192 297 122 0 chr2 30093114 30093188 -220594666 - MIR SINE MIR -3 259 177 2166 130 0 0 chr2 30094599 30094898 -220592956 + AluSx SINE Alu 1 299 -13 1245 240 79 14 chr2 30094970 30095538 -220592316 + L1MA9 LINE L1 3318 3948 -3617 2285 120 0 0 chr2 30095538 30095838 -220592016 + AluSx SINE Alu 1 300 -12 1245 240 79 14 chr2 30095838 30096034 -220591820 + L1MA9 LINE L1 3948 4130 -3435 * 7216 212 55 20 chr2 30096029 30098659 -220589195 + L1MA9 LINE L1 4480 7234 -497 243 0 0 0 chr2 30098659 30098686 -220589168 + (TG)n Simple_repeat Simple_repeat 2 28 0 7216 212 55 20 chr2 30098686 30099076 -220588778 + L1MA9 LINE L1 7234 7609 -122 265 306 125 25 chr2 30100685 30101012 -220586842 - L1P LINE L1 -5783 363 4 29 28 0 0 chr2 30101022 30101058 -220586796 + AT_rich Low_complexity Low_complexity 1 36 0 437 340 43 17 chr2 30101202 30101434 -220586420 + L2 LINE L2 2649 2886 -428 21 0 0 0 chr2 30101920 30101941 -220585913 + AT_rich Low_complexity Low_complexity 1 21 0 1958 127 3 38 chr2 30101944 30102258 -220585596 + AluSq SINE Alu 1 303 -10 2291 101 0 7 chr2 30102390 30102688 -220585166 + AluSc SINE Alu 1 296 -13 30 0 0 0 chr2 30103158 30103188 -220584666 + AT_rich Low_complexity Low_complexity 1 30 0 233 206 32 16 chr2 30103631 30103694 -220584160 + L1MEd LINE L1 1154 1217 -4902 244 217 0 33 chr2 30104763 30104855 -220582999 - L1MC4 LINE L1 -1340 6702 6614 241 222 40 20 chr2 30104790 30104889 -220582965 + L1MC4 LINE L1 6614 6714 -1328 * 22 0 0 0 chr2 30104979 30105001 -220582853 + AT_rich Low_complexity Low_complexity 1 22 0 334 292 97 26 chr2 30105468 30105622 -220582232 + MIR SINE MIR 58 222 -40 219 170 0 0 chr2 30107011 30107058 -220580796 + (TG)n Simple_repeat Simple_repeat 2 48 0 558 259 54 54 chr2 30107204 30107428 -220580426 + Charlie8 DNA MER1_type 37 260 -2157 2528 70 0 3 chr2 30107460 30107772 -220580082 - AluY SINE Alu 0 311 1 3207 79 41 48 chr2 30108256 30108491 -220579363 + LTR10D LTR ERV1 1 236 -277 2309 63 40 3 chr2 30108491 30108791 -220579063 - AluY SINE Alu 0 311 1 3207 79 41 48 chr2 30108791 30109072 -220578782 + LTR10D LTR ERV1 236 513 0 2032 135 6 10 chr2 30109298 30109609 -220578245 - AluSx SINE Alu -2 310 1 2161 113 0 7 chr2 30109630 30109922 -220577932 - AluSx SINE Alu -22 290 1 1336 139 129 82 chr2 30110509 30110803 -220577051 + AluSx SINE Alu 1 308 -4 278 286 29 0 chr2 30111000 30111070 -220576784 + L2 LINE L2 3242 3313 0 1680 139 20 22 chr2 30111584 30111930 -220575924 - MER4A LTR ERV1 0 664 261 465 186 21 10 chr2 30111930 30112027 -220575827 - MER4A LTR ERV1 -566 98 1 3897 125 52 16 chr2 30112035 30112746 -220575108 - MER4A-int LTR ERV1 -2 6596 5860 543 169 131 0 chr2 30112746 30112876 -220574978 + LTR8 LTR ERV1 111 257 -434 7447 112 51 35 chr2 30112876 30112899 -220574955 - LTR7-int LTR ERV1 -4103 2495 2474 1930 164 0 0 chr2 30112899 30113197 -220574657 + AluSx SINE Alu 1 298 -14 1918 132 6 52 chr2 30113197 30113523 -220574331 + AluY SINE Alu 1 311 0 7447 112 51 35 chr2 30113523 30114517 -220573337 - LTR7-int LTR ERV1 -4124 2474 1443 2542 78 125 5 chr2 30114517 30114917 -220572937 + LTR7 LTR ERV1 1 448 -2 7447 112 51 35 chr2 30114917 30115375 -220572479 - LTR7-int LTR ERV1 -5155 1443 994 343 164 0 0 chr2 30115369 30115424 -220572430 - LTR7-int LTR ERV1 -5706 892 838 * 207 114 0 0 chr2 30115514 30115549 -220572305 + (TTG)n Simple_repeat Simple_repeat 3 37 0 2370 98 52 34 chr2 30115551 30115825 -220572029 - LTR7-int LTR ERV1 -5782 816 549 2534 79 122 10 chr2 30115825 30116228 -220571626 - LTR7 LTR ERV1 -2 448 1 2370 98 52 34 chr2 30116228 30116314 -220571540 - LTR7-int LTR ERV1 -6049 549 466 2172 136 3 0 chr2 30116314 30116623 -220571231 + AluSx SINE Alu 1 310 -2 2370 98 52 34 chr2 30116623 30116942 -220570912 - LTR7-int LTR ERV1 -6132 466 1 1632 131 24 23 chr2 30116953 30117290 -220570564 - MER4A LTR ERV1 -6 658 263 449 135 42 21 chr2 30117290 30117386 -220570468 - MER4A LTR ERV1 -566 98 1 3684 144 57 52 chr2 30117419 30118084 -220569770 - MER4D LTR ERV1 -4 830 196 2345 62 3 39 chr2 30118084 30118391 -220569463 - AluSg1 SINE Alu -13 296 1 3684 144 57 52 chr2 30118391 30118588 -220569266 - MER4D LTR ERV1 -638 196 1 231 146 0 0 chr2 30118839 30118880 -220568974 + (TA)n Simple_repeat Simple_repeat 2 42 0 2118 120 0 0 chr2 30118882 30119156 -220568698 - AluSx SINE Alu -38 274 1 2172 131 0 0 chr2 30119609 30119907 -220567947 + AluSx SINE Alu 1 298 -14 25 31 0 0 chr2 30119948 30119980 -220567874 + AT_rich Low_complexity Low_complexity 1 32 0 209 224 0 41 chr2 30120866 30120915 -220566939 + GA-rich Low_complexity Low_complexity 2 48 0 2080 126 3 10 chr2 30121979 30122281 -220565573 + AluSc SINE Alu 1 300 -9 821 138 14 0 chr2 30122281 30122419 -220565435 + GA-rich Low_complexity Low_complexity 1 140 0 1760 193 0 13 chr2 30122614 30122930 -220564924 - AluJo SINE Alu 0 312 1 197 343 105 91 chr2 30122938 30123224 -220564630 + L2 LINE L2 2576 2865 -449 22 35 0 0 chr2 30124114 30124143 -220563711 + AT_rich Low_complexity Low_complexity 1 29 0 2761 186 31 31 chr2 30126400 30126454 -220561400 - L1MB8 LINE L1 -7 6171 6118 1771 127 123 27 chr2 30126454 30126786 -220561068 - THE1B LTR MaLR 0 364 1 2761 186 31 31 chr2 30126786 30127415 -220560439 - L1MB8 LINE L1 -59 6119 5488 1200 230 36 18 chr2 30127428 30127819 -220560035 - L1MB8 LINE L1 -1228 4918 4521 919 164 11 0 chr2 30127846 30128029 -220559825 + L1 LINE L1 4494 4678 -1468 5633 123 19 1 chr2 30128078 30129315 -220558539 + L1PA15 LINE L1 4909 6165 0 806 158 13 0 chr2 30129322 30129474 -220558380 + MER41B LTR ERV1 480 633 -2 2493 150 16 14 chr2 30129474 30129913 -220557941 + MER41B-int LTR ERV1 13 452 -5494 3997 137 28 20 chr2 30130045 30130729 -220557125 + MER41-int LTR ERV1 2 690 -5256 2171 121 51 19 chr2 30130729 30131101 -220556753 + MER41-int LTR ERV1 1392 1775 -4171 576 164 21 0 chr2 30131080 30131194 -220556660 + MER41-int LTR ERV1 944 1059 -4158 * 3267 144 94 7 chr2 30131200 30131795 -220556059 + MER41-int LTR ERV1 2166 2812 -3134 2526 49 0 10 chr2 30132124 30132431 -220555423 + AluY SINE Alu 1 304 -7 799 183 114 121 chr2 30132802 30133233 -220554621 - MLT1A1 LTR MaLR 0 365 1 721 203 0 0 chr2 30133731 30133869 -220553985 + MLT1A2 LTR MaLR 237 374 0 25 51 0 0 chr2 30134400 30134439 -220553415 + AT_rich Low_complexity Low_complexity 1 39 0 1537 128 4 0 chr2 30135035 30135270 -220552584 - L1P4 LINE L1 -505 5661 5426 732 154 16 0 chr2 30135267 30135390 -220552464 + L1P LINE L1 4869 4993 -1153 * 237 267 23 92 chr2 30135390 30135521 -220552333 + MLT1D LTR MaLR 126 247 -258 1235 118 0 0 chr2 30135550 30135745 -220552109 - L1MA3 LINE L1 -1 6304 6110 1726 186 3 7 chr2 30135748 30136066 -220551788 - AluJb SINE Alu 0 312 6 421 274 93 101 chr2 30136918 30137166 -220550688 + MIR SINE MIR 17 262 0 397 315 34 40 chr2 30137390 30137539 -220550315 + L2 LINE L2 3125 3272 0 2100 118 0 3 chr2 30137590 30137886 -220549968 - AluSq SINE Alu -18 295 1 22 70 0 0 chr2 30138125 30138168 -220549686 + AT_rich Low_complexity Low_complexity 1 43 0 268 242 27 108 chr2 30138211 30138367 -220549487 - L1MEc LINE L1 -4314 2249 2115 883 124 0 0 chr2 30138367 30138504 -220549350 - L1MA3 LINE L1 -8 6297 6161 268 242 27 108 chr2 30138504 30138570 -220549284 - L1MEc LINE L1 -4448 2115 2045 324 137 0 0 chr2 30138676 30138727 -220549127 - U5 snRNA snRNA -65 51 1 603 294 52 38 chr2 30138945 30139289 -220548565 - L1MEc LINE L1 -4543 1841 1493 1441 254 98 50 chr2 30139390 30140311 -220547543 + L1M4 LINE L1 3826 4790 -1356 421 259 60 46 chr2 30140349 30140565 -220547289 + L1M4 LINE L1 4961 5179 -967 456 301 36 6 chr2 30140579 30140745 -220547109 + L1ME LINE L1 12 182 -5888 635 279 92 67 chr2 30140755 30141235 -220546619 + L1M4 LINE L1 4201 4692 -1454 9012 111 22 6 chr2 30141335 30142704 -220545150 - MER41-int LTR ERV1 -509 5437 4047 365 149 27 27 chr2 30142804 30142888 -220544966 - AluS SINE Alu -241 59 1 1700 184 16 10 chr2 30144338 30144647 -220543207 + AluSx SINE Alu 1 311 -1 678 53 53 29 chr2 30144817 30144987 -220542867 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 313 250 206 0 chr2 30145127 30145219 -220542635 + L2 LINE L2 3201 3311 -2 403 271 13 66 chr2 30146082 30146233 -220541621 - MIR SINE MIR -56 206 64 1794 185 20 58 chr2 30147061 30147461 -220540393 - LTR8 LTR ERV1 -291 400 16 354 356 67 0 chr2 30147573 30147708 -220540146 - MIR SINE MIR -116 146 3 718 275 53 5 chr2 30147742 30147931 -220539923 + MIR SINE MIR 8 205 -57 181 364 15 0 chr2 30147945 30148011 -220539843 - L2 LINE L2 -251 3062 2996 1137 134 77 160 chr2 30148048 30148154 -220539700 + MER49 LTR ERV1 1 114 -809 1745 105 0 4 chr2 30148154 30148422 -220539432 + AluSg SINE Alu 55 321 0 1137 134 77 160 chr2 30148422 30148625 -220539229 + MER49 LTR ERV1 114 287 -636 * 1566 187 43 50 chr2 30148610 30149027 -220538827 + MER4D LTR ERV1 490 903 0 3246 127 4 6 chr2 30149262 30149759 -220538095 - MER41B LTR ERV1 -88 547 52 1013 128 0 7 chr2 30149859 30150007 -220537847 + AluSq SINE Alu 63 209 -104 284 281 0 0 chr2 30151043 30151107 -220536747 + (ATG)n Simple_repeat Simple_repeat 3 66 0 236 299 34 8 chr2 30151512 30151629 -220536225 - L1M2 LINE L1 -834 5466 5347 303 250 0 0 chr2 30152034 30152114 -220535740 - L1M2 LINE L1 -1316 4830 4751 852 257 42 33 chr2 30152116 30152330 -220535524 - MER58A DNA MER1_type 0 224 9 1475 223 44 15 chr2 30152453 30152932 -220534922 - L1M4 LINE L1 -820 6137 5645 1145 146 78 0 chr2 30152937 30153156 -220534698 - Tigger2a DNA MER2_type 0 444 209 2432 120 17 3 chr2 30153156 30153515 -220534339 + THE1B LTR MaLR 1 364 0 3446 83 40 20 chr2 30153529 30154030 -220533824 + THE1-int LTR MaLR 1042 1576 -4 2612 116 3 3 chr2 30154035 30154398 -220533456 + THE1B LTR MaLR 2 364 0 895 185 25 45 chr2 30154398 30154592 -220533262 - Tigger2a DNA MER2_type -232 202 13 858 227 37 7 chr2 30154667 30154940 -220532914 - L1M4 LINE L1 -3608 3349 3069 3315 241 67 26 chr2 30155052 30156255 -220531599 - L1M4 LINE L1 -4974 1881 633 1238 303 131 25 chr2 30156259 30156780 -220531074 - L1M4 LINE L1 -6275 584 9 712 219 25 0 chr2 30157009 30157169 -220530685 + L1MB5 LINE L1 5974 6137 -37 26 50 0 0 chr2 30157169 30157209 -220530645 + AT_rich Low_complexity Low_complexity 1 40 0 258 288 0 0 chr2 30157228 30157287 -220530567 - MER58A DNA MER1_type -162 62 4 21 0 0 0 chr2 30157434 30157455 -220530399 + AT_rich Low_complexity Low_complexity 1 21 0 205 197 155 14 chr2 30157466 30157537 -220530317 - MIR SINE MIR -26 236 156 182 351 0 14 chr2 30159935 30160009 -220527845 + MIR3 SINE MIR 125 197 -11 35 41 0 0 chr2 30160164 30160213 -220527641 + AT_rich Low_complexity Low_complexity 1 49 0 1261 197 112 0 chr2 30160278 30160537 -220527317 - AluJo SINE Alu -24 288 1 239 331 22 72 chr2 30160908 30161089 -220526765 + L2 LINE L2 2915 3086 -186 5473 158 19 9 chr2 30161480 30162440 -220525414 + LTR5 LTR ERVK 1 969 0 262 318 77 41 chr2 30162564 30162734 -220525120 - L2 LINE L2 -1962 1352 1177 39 38 0 0 chr2 30163123 30163176 -220524678 + AT_rich Low_complexity Low_complexity 1 53 0 1556 189 7 24 chr2 30163469 30163765 -220524089 - AluJb SINE Alu -21 291 1 2371 70 0 10 chr2 30164054 30164352 -220523502 - AluY SINE Alu -16 295 1 226 331 54 15 chr2 30164502 30164632 -220523222 - MIR SINE MIR -24 238 104 438 256 24 24 chr2 30164862 30165026 -220522828 + L1M4 LINE L1 4770 4933 -1213 1789 152 54 38 chr2 30165031 30165400 -220522454 + THE1C LTR MaLR 1 375 0 30779 62 1 1 chr2 30165522 30169460 -220518394 - L1P LINE L1 -2209 3937 1 2249 110 0 7 chr2 30169544 30169854 -220518000 - AluSx SINE Alu -4 308 1 32 43 0 0 chr2 30170240 30170286 -220517568 + AT_rich Low_complexity Low_complexity 1 46 0 746 257 53 0 chr2 30171074 30171261 -220516593 - MLT1B LTR MaLR -9 381 185 258 132 0 0 chr2 30171279 30171332 -220516522 + (GA)n Simple_repeat Simple_repeat 1 53 0 770 174 63 16 chr2 30171353 30171536 -220516318 - MLT1B LTR MaLR -193 181 1 1885 150 3 13 chr2 30171850 30172163 -220515691 - AluSx SINE Alu -2 310 1 25 0 0 0 chr2 30172379 30172404 -220515450 + AT_rich Low_complexity Low_complexity 1 25 0 1683 185 3 10 chr2 30172565 30172863 -220514991 - AluJo SINE Alu -8 304 9 4700 66 6 22 chr2 30173010 30173689 -220514165 + L1PA7 LINE L1 5509 6177 0 29 0 0 0 chr2 30174465 30174494 -220513360 + AT_rich Low_complexity Low_complexity 1 29 0 270 141 26 39 chr2 30174699 30174777 -220513077 + GA-rich Low_complexity Low_complexity 2 78 0 2034 112 39 7 chr2 30176427 30176713 -220511141 - AluSg SINE Alu -13 297 3 416 46 0 31 chr2 30177835 30177900 -220509954 + L1PA4 LINE L1 6087 6149 -6 29 28 0 0 chr2 30178407 30178443 -220509411 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 30178567 30178597 -220509257 + AT_rich Low_complexity Low_complexity 1 30 0 776 192 41 0 chr2 30178625 30178771 -220509083 - FAM SINE Alu -16 169 18 22 35 0 0 chr2 30179158 30179187 -220508667 + AT_rich Low_complexity Low_complexity 1 29 0 460 277 30 92 chr2 30179614 30179796 -220508058 - MIR SINE MIR 0 262 91 2319 111 0 0 chr2 30179796 30180093 -220507761 - AluSx SINE Alu -15 297 1 460 277 30 92 chr2 30180093 30180174 -220507680 - MIR SINE MIR -171 91 7 2261 157 38 10 chr2 30180318 30180729 -220507125 + L1PA16 LINE L1 5616 6038 -128 270 132 0 0 chr2 30181405 30181458 -220506396 + (CAAT)n Simple_repeat Simple_repeat 2 54 0 270 317 106 0 chr2 30181986 30182090 -220505764 - L2 LINE L2 -8 3305 3191 21 57 0 0 chr2 30182590 30182625 -220505229 + AT_rich Low_complexity Low_complexity 1 35 0 374 295 8 25 chr2 30182686 30182808 -220505046 - MIR3 SINE MIR -3 205 86 750 314 94 26 chr2 30183305 30183970 -220503884 - L2 LINE L2 -13 3300 2596 3702 102 28 65 chr2 30184089 30184315 -220503539 - MER41B-int LTR ERV1 -1993 3953 3720 1911 154 0 0 chr2 30184315 30184595 -220503259 - AluSx SINE Alu -19 293 14 3702 102 28 65 chr2 30184595 30185047 -220502807 - MER41B-int LTR ERV1 -2226 3720 3300 * 3715 145 80 17 chr2 30185035 30185725 -220502129 - MER41B-int LTR ERV1 -3900 3637 2905 2202 152 22 0 chr2 30185725 30186081 -220501773 + THE1B LTR MaLR 1 364 0 667 149 0 18 chr2 30186081 30186195 -220501659 - MER41B-int LTR ERV1 -4201 2062 1951 * 3495 139 36 36 chr2 30186168 30186770 -220501084 - MER41B-int LTR ERV1 -4157 1789 1188 520 128 0 0 chr2 30186766 30186844 -220501010 - MER41B-int LTR ERV1 -5138 808 731 * 1973 139 19 16 chr2 30186837 30187153 -220500701 - MER41B-int LTR ERV1 -5628 318 2 1017 108 19 0 chr2 30187154 30187312 -220500542 - MER41B LTR ERV1 0 635 475 1821 102 36 4 chr2 30187438 30187804 -220500050 - LTR23 LTR ERV1 -10 427 2 23 0 0 0 chr2 30188291 30188314 -220499540 + AT_rich Low_complexity Low_complexity 1 23 0 596 320 79 34 chr2 30188681 30188895 -220498959 - LTR16A LTR ERVL -19 431 228 1345 168 76 4 chr2 30188895 30189157 -220498697 - L1PB4 LINE L1 -2 6154 5874 596 320 79 34 chr2 30189157 30189349 -220498505 - LTR16A LTR ERVL -222 228 2 840 326 111 56 chr2 30190531 30191414 -220496440 - L2 LINE L2 -338 2976 2143 261 0 0 0 chr2 30191414 30191443 -220496411 + (TTA)n Simple_repeat Simple_repeat 2 30 0 2868 53 3 0 chr2 30191443 30191799 -220496055 - L1PA8 LINE L1 -10 6162 5806 840 326 111 56 chr2 30191799 30191868 -220495986 - L2 LINE L2 -1170 2144 1970 1398 146 32 64 chr2 30192160 30192441 -220495413 - AluJb SINE Alu -6 306 35 518 335 127 10 chr2 30192613 30192998 -220494856 - L2 LINE L2 -2865 449 20 26 0 0 0 chr2 30193376 30193402 -220494452 + AT_rich Low_complexity Low_complexity 1 26 0 2115 130 3 3 chr2 30193525 30193833 -220494021 - AluSq SINE Alu -5 308 1 1962 118 0 10 chr2 30194599 30194895 -220492959 + L1MC1 LINE L1 6024 6316 -17 270 81 0 0 chr2 30195861 30195898 -220491956 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 2238 67 27 7 chr2 30196535 30196832 -220491022 + AluY SINE Alu 1 303 -8 1190 307 57 11 chr2 30196976 30197413 -220490441 + L2 LINE L2 1019 1475 -1839 751 259 69 5 chr2 30197437 30197653 -220490201 + MIR SINE MIR 33 262 0 1934 284 78 47 chr2 30197657 30198329 -220489525 + L2 LINE L2 1488 2194 -1120 2229 112 0 3 chr2 30198329 30198624 -220489230 - AluSq SINE Alu -13 300 7 1934 284 78 47 chr2 30198624 30198810 -220489044 + L2 LINE L2 2194 2373 -941 455 108 0 12 chr2 30199290 30199373 -220488481 - L1MA4 LINE L1 -5 6295 6214 995 260 59 24 chr2 30199487 30199867 -220487987 - MER63B DNA MER1_type 0 434 1 21 0 0 0 chr2 30200226 30200247 -220487607 + AT_rich Low_complexity Low_complexity 1 21 0 2024 122 3 14 chr2 30200248 30200577 -220487277 - AluSq SINE Alu 0 326 1 392 249 95 85 chr2 30201189 30201378 -220486476 + L2 LINE L2 2983 3173 -99 637 281 43 0 chr2 30206338 30206523 -220481331 - L2 LINE L2 -1761 1553 1361 291 336 80 0 chr2 30206647 30206772 -220481082 - MER5A DNA MER1_type -18 171 37 1791 193 6 65 chr2 30206879 30207303 -220480551 - MLT2C1 LTR ERVL -7 513 1 185 337 87 0 chr2 30207371 30207463 -220480391 + L2 LINE L2 2926 3025 -247 225 250 0 19 chr2 30207940 30207992 -220479862 + CT-rich Low_complexity Low_complexity 4 54 0 616 269 122 35 chr2 30208259 30208635 -220479219 - HAL1 LINE L1 -1512 995 587 662 266 47 43 chr2 30208838 30209071 -220478783 - HAL1 LINE L1 -2272 235 2 318 261 109 0 chr2 30209464 30209583 -220478271 - HAL1b LINE L1 -1161 187 56 2440 146 30 24 chr2 30209995 30210461 -220477393 - L1MA5 LINE L1 0 6300 5832 4911 168 88 32 chr2 30210561 30210627 -220477227 - L1MA5 LINE L1 -762 5384 5323 2095 104 21 0 chr2 30210627 30210940 -220476914 - AluSq SINE Alu 0 319 1 4911 168 88 32 chr2 30210940 30212147 -220475707 - L1MA5 LINE L1 -823 5323 4123 207 0 0 0 chr2 30212429 30212452 -220475402 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 17653 32 1 2 chr2 30212455 30215361 -220472493 - L1PA4 LINE L1 -2 6153 3252 14113 31 5 2 chr2 30215355 30217833 -220470021 - L1PA2 LINE L1 -1 6154 3671 * 187 337 129 10 chr2 30217959 30218060 -220469794 + L2 LINE L2 3198 3310 -3 929 247 23 9 chr2 30218762 30218981 -220468873 - MIR SINE MIR -26 236 15 555 198 0 0 chr2 30219446 30219547 -220468307 - MER94 DNA DNA -33 101 1 223 370 106 45 chr2 30219624 30219983 -220467871 + L2 LINE L2 2850 3230 -42 819 274 94 0 chr2 30221203 30221426 -220466428 - MIR SINE MIR -5 257 14 1688 163 11 14 chr2 30221622 30221905 -220465949 + AluJo SINE Alu 6 287 -25 24 0 0 0 chr2 30221905 30221929 -220465925 + AT_rich Low_complexity Low_complexity 1 24 0 2041 92 34 0 chr2 30223186 30223480 -220464374 + AluSx SINE Alu 1 304 -8 563 285 32 0 chr2 30224868 30225026 -220462828 - MIR SINE MIR -10 252 90 217 170 0 21 chr2 30225136 30225183 -220462671 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 25 31 0 0 chr2 30225839 30225871 -220461983 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 30225935 30225956 -220461898 + AT_rich Low_complexity Low_complexity 1 21 0 762 167 0 0 chr2 30226092 30226212 -220461642 - FLAM_C SINE Alu -23 120 1 28 61 0 0 chr2 30226292 30226341 -220461513 + AT_rich Low_complexity Low_complexity 1 49 0 183 42 0 0 chr2 30227075 30227099 -220460755 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 338 269 0 19 chr2 30227362 30227470 -220460384 - MER4C LTR ERV1 -205 260 155 4929 127 19 61 chr2 30227564 30228511 -220459343 - THE1C-int LTR MaLR -670 910 4 1871 147 49 30 chr2 30228514 30228882 -220458972 - THE1C LTR MaLR 0 375 1 670 252 22 13 chr2 30228902 30229128 -220458726 + L1M4 LINE L1 5047 5274 -872 514 265 22 6 chr2 30229335 30229516 -220458338 - L1MD3 LINE L1 -3 7992 7809 2006 120 3 20 chr2 30229696 30229963 -220457891 + AluSx SINE Alu 16 279 -33 186 43 0 0 chr2 30229963 30229986 -220457868 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2006 120 3 20 chr2 30229986 30230019 -220457835 + AluSx SINE Alu 279 311 -1 2363 68 0 7 chr2 30230039 30230335 -220457519 + AluY SINE Alu 1 294 -17 1019 174 0 28 chr2 30230340 30230518 -220457336 + FRAM SINE Alu 4 176 0 180 305 49 24 chr2 30230585 30230667 -220457187 - MER5A DNA MER1_type -50 139 56 340 191 0 0 chr2 30230728 30230796 -220457058 - LTR59 LTR ERV1 -116 481 414 1887 102 102 10 chr2 30230798 30231166 -220456688 + LTR7 LTR ERV1 1 450 0 1113 111 139 5 chr2 30231166 30231382 -220456472 - LTR59 LTR ERV1 -175 422 178 276 315 24 6 chr2 30231562 30231727 -220456127 + MER41B LTR ERV1 258 425 -210 976 141 41 12 chr2 30231933 30232103 -220455751 - LTR59 LTR ERV1 -422 175 1 398 164 0 0 chr2 30232449 30232510 -220455344 + MER21B LTR ERV1 36 96 -767 1364 66 132 0 chr2 30233279 30233476 -220454378 - AluSc SINE Alu -3 306 84 453 105 47 0 chr2 30233930 30234016 -220453838 + MER41-int LTR ERV1 2827 2916 -3030 626 95 8 40 chr2 30234016 30234142 -220453712 + THE1C-int LTR MaLR 1459 1580 0 1465 163 118 9 chr2 30234142 30234480 -220453374 + THE1C LTR MaLR 1 375 0 9356 138 27 35 chr2 30234483 30236072 -220451782 + THE1C-int LTR MaLR 4 1580 0 1814 144 66 30 chr2 30236072 30236434 -220451420 + THE1C LTR MaLR 1 375 0 379 205 81 6 chr2 30236718 30236879 -220450975 + (CTATA)n Simple_repeat Simple_repeat 2 174 0 21 36 0 0 chr2 30236938 30236966 -220450888 + AT_rich Low_complexity Low_complexity 1 28 0 2072 242 119 33 chr2 30238080 30238216 -220449638 - Charlie1a DNA MER1_type -1831 930 807 1728 142 78 36 chr2 30238216 30238576 -220449278 + THE1C LTR MaLR 1 375 0 2072 242 119 33 chr2 30238576 30239295 -220448559 - Charlie1a DNA MER1_type -1954 807 1 317 244 152 43 chr2 30239623 30239787 -220448067 - MLT1J2 LTR MaLR 0 450 269 1208 128 12 0 chr2 30241673 30241845 -220446009 - AluSg/x SINE Alu -5 307 134 2136 131 51 17 chr2 30242071 30242423 -220445431 - THE1B LTR MaLR 0 364 1 11446 82 5 2 chr2 30242430 30243675 -220444179 - THE1B-int LTR MaLR -8 1572 321 2009 110 0 4 chr2 30243675 30243948 -220443906 - AluSq SINE Alu -6 307 36 11446 82 5 2 chr2 30243948 30244270 -220443584 - THE1B-int LTR MaLR -1259 321 1 2178 125 51 17 chr2 30244270 30244622 -220443232 - THE1B LTR MaLR 0 364 1 401 148 193 0 chr2 30244774 30244862 -220442992 - THE1A LTR MaLR -250 105 1 24 32 0 0 chr2 30245094 30245125 -220442729 + AT_rich Low_complexity Low_complexity 1 31 0 2772 29 0 0 chr2 30245288 30245597 -220442257 + AluY SINE Alu 1 309 -2 763 163 13 20 chr2 30246357 30246510 -220441344 + L1MA4 LINE L1 5887 6038 -262 428 277 126 13 chr2 30246614 30246773 -220441081 + MIR SINE MIR 60 236 -26 1652 193 0 3 chr2 30247167 30247462 -220440392 - AluJb SINE Alu -17 295 2 870 315 43 13 chr2 30247484 30247789 -220440065 + L2 LINE L2 2999 3312 -1 365 285 60 61 chr2 30250199 30250377 -220437477 + MIR SINE MIR 34 210 -52 511 270 9 0 chr2 30250715 30250830 -220437024 - FLAM_A SINE Alu -17 116 1 892 183 70 15 chr2 30250887 30251160 -220436694 - MER45R DNA AcHobo -102 1479 1192 2517 185 25 4 chr2 30251180 30251693 -220436161 - L1MC3 LINE L1 0 7785 7262 2793 153 53 3 chr2 30251794 30252783 -220435071 - L1P4 LINE L1 -406 6410 5392 2889 211 29 5 chr2 30252794 30253414 -220434440 - L1P4 LINE L1 -4917 1870 1236 1740 164 97 3 chr2 30253665 30254055 -220433799 - MER45R DNA AcHobo -451 1130 704 650 323 0 35 chr2 30254072 30254304 -220433550 + L1P3 LINE L1 2 225 -6562 12570 240 29 12 chr2 30254326 30258108 -220429746 + L1PA16 LINE L1 1358 5272 -1545 3532 121 86 21 chr2 30258108 30258713 -220429141 + LTR9B LTR ERV1 1 644 0 12570 240 29 12 chr2 30258713 30260282 -220427572 + L1PA16 LINE L1 5272 6812 -5 683 164 8 8 chr2 30260285 30260413 -220427441 - MER45R DNA AcHobo -869 712 585 529 144 0 0 chr2 30260415 30260505 -220427349 + L1P4 LINE L1 5724 5813 -350 1043 306 71 48 chr2 30260505 30261126 -220426728 - MER45R DNA AcHobo -946 635 1 261 57 0 0 chr2 30261453 30261488 -220426366 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 621 304 52 43 chr2 30261537 30261767 -220426087 + MIR SINE MIR 23 254 -8 266 135 180 56 chr2 30261839 30261928 -220425926 + L1ME4a LINE L1 5989 6088 -33 186 103 0 0 chr2 30262013 30262042 -220425812 + (TC)n Simple_repeat Simple_repeat 2 30 0 372 77 0 0 chr2 30262059 30262111 -220425743 + (CA)n Simple_repeat Simple_repeat 1 52 0 454 110 50 10 chr2 30262180 30262280 -220425574 + MER53 DNA DNA 3 106 -83 387 157 98 20 chr2 30262329 30262431 -220425423 + MER53 DNA DNA 80 189 0 243 152 0 0 chr2 30262693 30262739 -220425115 + (CA)n Simple_repeat Simple_repeat 1 46 0 407 277 151 6 chr2 30263581 30263740 -220424114 + MIR SINE MIR 7 188 -74 1258 145 26 13 chr2 30265185 30265419 -220422435 - L1M1 LINE L1 -7317 248 12 2069 244 23 5 chr2 30265956 30266514 -220421340 + L1P3 LINE L1 373 940 -5271 3133 99 16 12 chr2 30266514 30266999 -220420855 + LTR15 LTR ERV1 1 487 -6 9732 219 23 40 chr2 30267003 30269917 -220417937 + L1P3 LINE L1 935 3905 -2892 207 203 149 27 chr2 30470975 30471049 -220216805 + MIR SINE MIR 21 103 -105 300 27 0 0 chr2 30471379 30471416 -220216438 + (TG)n Simple_repeat Simple_repeat 1 37 0 185 289 119 62 chr2 30471973 30472167 -220215687 + L2 LINE L2 3109 3313 0 280 248 73 28 chr2 30472198 30472307 -220215547 - MLT1K LTR MaLR -44 544 431 751 250 91 19 chr2 30472388 30472596 -220215258 - MLT1K LTR MaLR -364 224 2 210 245 191 0 chr2 30473180 30473274 -220214580 - MIR SINE MIR -63 145 34 10595 172 23 20 chr2 30473958 30475639 -220212215 + L1 LINE L1 2884 4575 -1571 547 115 0 0 chr2 30475639 30475717 -220212137 + MADE1 DNA Mariner 3 80 0 10595 172 23 20 chr2 30475717 30476162 -220211692 + L1 LINE L1 4575 5017 -1129 5889 29 6 0 chr2 30476262 30476947 -220210907 + L1PA4 LINE L1 5467 6155 0 6537 205 57 23 chr2 30476966 30478895 -220208959 + L1M4 LINE L1 3569 5561 -613 250 191 0 0 chr2 30479205 30479252 -220208602 + MLT1K LTR MaLR 509 555 -33 298 244 110 24 chr2 30479311 30479438 -220208416 + MER5A DNA MER1_type 1 138 -51 2422 70 6 19 chr2 30479438 30479753 -220208101 - AluSx SINE Alu 0 312 2 1198 158 0 11 chr2 30479766 30479956 -220207898 - AluJ SINE Alu -16 296 109 2219 91 3 53 chr2 30479975 30480293 -220207561 - AluSp SINE Alu -11 302 1 2121 151 34 79 chr2 30480295 30480766 -220207088 + LTR46 LTR ERV1 11 460 0 2312 77 40 0 chr2 30480770 30481068 -220206786 + AluSp SINE Alu 1 310 -3 649 193 0 0 chr2 30481078 30481187 -220206667 - AluJ SINE Alu -202 110 2 1181 134 6 0 chr2 30481616 30481787 -220206067 - AluSg/x SINE Alu -10 302 131 1411 291 110 27 chr2 30482931 30483738 -220204116 + L2 LINE L2 745 1618 -1696 1587 128 4 75 chr2 30483758 30483883 -220203971 + AluJo SINE Alu 17 115 -197 2181 98 42 0 chr2 30483883 30484170 -220203684 + AluSx SINE Alu 1 299 -13 1587 128 4 75 chr2 30484170 30484310 -220203544 + AluJo SINE Alu 115 263 -49 331 301 18 30 chr2 30484357 30484523 -220203331 - L1M4 LINE L1 -5110 1432 1269 1168 258 55 48 chr2 30484746 30485346 -220202508 - L1M4 LINE L1 -3324 2822 2219 568 111 12 0 chr2 30485349 30485430 -220202424 + AluJ/FLAM SINE Alu 5 86 -226 623 275 40 75 chr2 30486195 30486569 -220201285 + L1ME3A LINE L1 3750 4110 -2036 1116 226 104 18 chr2 30486571 30487187 -220200667 + L1ME3A LINE L1 4915 5578 -592 695 117 9 27 chr2 30487191 30487302 -220200552 - THE1B LTR MaLR 0 364 256 1628 205 28 31 chr2 30487302 30487693 -220200161 + L1ME3A LINE L1 5582 5971 -199 2671 52 3 0 chr2 30487717 30488026 -220199828 - AluSp SINE Alu -3 310 1 651 171 116 20 chr2 30488146 30488292 -220199562 - MER97b DNA MER1_type? -875 178 19 256 237 17 0 chr2 30488305 30488364 -220199490 + L1ME3A LINE L1 6103 6162 -8 2218 116 10 3 chr2 30488783 30489093 -220198761 - AluSx SINE Alu 0 312 1 299 136 0 2 chr2 30489958 30490011 -220197843 + Alu SINE Alu 254 299 -3 2195 112 3 0 chr2 30490530 30490826 -220197028 - AluSx SINE Alu -10 302 6 1729 161 50 0 chr2 30490976 30491255 -220196599 + AluSx SINE Alu 1 293 -19 1835 134 7 7 chr2 30491737 30492021 -220195833 - AluSq SINE Alu -29 284 1 2220 58 4 0 chr2 30492045 30492306 -220195548 - AluY SINE Alu -12 299 38 506 115 11 11 chr2 30492908 30492995 -220194859 + AluJb SINE Alu 158 244 -68 180 125 0 0 chr2 30493033 30493065 -220194789 + (T)n Simple_repeat Simple_repeat 1 32 0 771 155 8 8 chr2 30493266 30493395 -220194459 - FLAM_C SINE Alu -4 129 1 295 245 122 48 chr2 30494073 30494220 -220193634 + L1ME3A LINE L1 5794 5951 -219 2238 123 0 0 chr2 30494337 30494639 -220193215 + AluSx SINE Alu 1 302 -10 2407 53 0 3 chr2 30494738 30495046 -220192808 + AluY SINE Alu 1 307 0 464 258 91 21 chr2 30495543 30495729 -220192125 + HAL1 LINE L1 2309 2507 0 909 271 51 38 chr2 30495902 30496427 -220191427 + L1MC/D LINE L1 4080 4611 -1535 1342 279 86 11 chr2 30496433 30496909 -220190945 - LTR33 LTR ERVL -2 519 8 532 274 147 30 chr2 30496923 30497619 -220190235 + L1MC/D LINE L1 4795 5577 -743 241 352 8 0 chr2 30497787 30497915 -220189939 + L2 LINE L2 2127 2255 -1059 456 72 0 0 chr2 30498176 30498245 -220189609 + (TG)n Simple_repeat Simple_repeat 2 70 0 256 115 0 33 chr2 30499159 30499220 -220188634 + (TA)n Simple_repeat Simple_repeat 2 60 0 349 322 13 0 chr2 30499227 30499358 -220188496 - MIR SINE MIR -65 143 18 581 257 20 26 chr2 30499591 30499743 -220188111 - LTR33 LTR ERVL 0 521 371 344 319 70 5 chr2 30499761 30499974 -220187880 - LTR33 LTR ERVL -257 264 38 860 165 24 94 chr2 30500082 30500294 -220187560 + MER58A DNA MER1_type 3 199 -25 622 297 30 22 chr2 30500322 30500554 -220187300 - L2 LINE L2 -3 3310 3077 226 308 0 0 chr2 30500826 30500891 -220186963 - MIR SINE MIR -104 104 40 2194 101 14 0 chr2 30502413 30502701 -220185153 + AluSc SINE Alu 1 292 -17 1905 161 0 0 chr2 30503122 30503402 -220184452 - AluJb SINE Alu -32 280 1 222 245 70 0 chr2 30504016 30504086 -220183768 - MIR SINE MIR -77 131 57 478 223 0 27 chr2 30504555 30504667 -220183187 - MER81 DNA DNA -2 112 4 990 184 32 57 chr2 30505682 30506045 -220181809 - LTR48B LTR ERV1 0 644 236 1422 225 7 77 chr2 30506179 30506597 -220181257 + L1MEc LINE L1 285 673 -5723 212 0 0 35 chr2 30506910 30506939 -220180915 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1752 92 0 17 chr2 30506948 30507187 -220180667 - AluSq SINE Alu -78 235 1 5108 77 5 5 chr2 30507581 30508241 -220179613 - PABL_A LTR ERV1 0 660 1 689 263 65 26 chr2 30508266 30508498 -220179356 + LTR16C LTR ERVL 85 325 -166 414 185 0 0 chr2 30508485 30508550 -220179304 + LTR8 LTR ERV1 619 683 -8 * 944 205 15 10 chr2 30508653 30508848 -220179006 + LTR16C LTR ERVL 296 491 0 256 308 26 0 chr2 30508879 30508957 -220178897 - MIR3 SINE MIR -18 190 111 3261 163 45 71 chr2 30509594 30510122 -220177732 + LTR8 LTR ERV1 16 524 -167 2289 88 0 3 chr2 30510122 30510435 -220177419 + AluSp SINE Alu 1 312 0 3261 163 45 71 chr2 30510435 30510599 -220177255 + LTR8 LTR ERV1 524 691 0 264 259 116 27 chr2 30510637 30510749 -220177105 + MIR SINE MIR 59 180 -82 2336 86 3 7 chr2 30512005 30512308 -220175546 + AluSp SINE Alu 2 303 -10 577 246 56 28 chr2 30512467 30512646 -220175208 + MER5A DNA MER1_type 6 189 0 555 198 0 0 chr2 30513194 30513285 -220174569 - Tigger7 DNA MER2_type -1 2486 2396 1868 178 0 3 chr2 30513285 30513594 -220174260 - AluJo SINE Alu -4 308 1 1049 157 211 14 chr2 30513606 30513829 -220174025 - Tigger7 DNA MER2_type -466 267 1 1263 104 4 124 chr2 30514439 30514522 -220173332 - MER50 LTR ERV1 -47 687 596 2200 110 33 0 chr2 30514522 30514821 -220173033 - AluSx SINE Alu -2 310 2 1263 104 4 124 chr2 30514821 30514875 -220172979 - MER50 LTR ERV1 -138 596 537 2308 91 0 13 chr2 30514875 30515182 -220172672 + AluSx SINE Alu 1 303 -9 1263 104 4 124 chr2 30515182 30515302 -220172552 - MER50 LTR ERV1 -197 537 460 1716 162 65 40 chr2 30515303 30515841 -220172013 + MLT2A2 LTR ERVL 1 554 0 1418 146 8 4 chr2 30515856 30516095 -220171759 - MER50 LTR ERV1 -494 240 1 284 203 63 119 chr2 30516875 30516936 -220170918 + MER34 LTR ERV1 1 64 -478 1781 153 3 62 chr2 30516936 30517256 -220170598 - AluJo SINE Alu -11 301 1 284 203 63 119 chr2 30517256 30517337 -220170517 + MER34 LTR ERV1 64 135 -407 * 710 235 93 20 chr2 30517313 30517517 -220170337 + LTR29 LTR ERV1 141 359 -263 298 309 57 52 chr2 30518405 30518809 -220169045 + L2 LINE L2 2867 3272 -41 232 243 118 35 chr2 30519434 30519578 -220168276 - L1ME4a LINE L1 0 6121 5966 624 223 76 24 chr2 30519679 30519922 -220167932 + MIR SINE MIR 12 262 0 702 277 63 12 chr2 30520291 30520544 -220167310 + LTR16A LTR ERVL 92 357 -93 435 148 17 43 chr2 30520543 30520658 -220167196 + LTR16A LTR ERVL 317 428 -22 * 288 301 81 32 chr2 30520662 30520848 -220167006 - L2 LINE L2 -252 3061 2867 9501 171 85 42 chr2 30521170 30522284 -220165570 + L1MDa LINE L1 18 1082 -5458 1770 156 0 42 chr2 30522284 30522591 -220165263 + AluJb SINE Alu 3 296 -16 9501 171 85 42 chr2 30522591 30523724 -220164130 + L1MDa LINE L1 1082 2362 -4178 2846 163 15 91 chr2 30523842 30524007 -220163847 + MER4E LTR ERV1 214 390 -389 2421 78 0 16 chr2 30524007 30524314 -220163540 + AluY SINE Alu 4 305 -6 2846 163 15 91 chr2 30524314 30524761 -220163093 + MER4E LTR ERV1 390 779 0 4236 173 71 46 chr2 30524886 30525420 -220162434 + L1MDa LINE L1 1470 1989 -4551 1715 166 11 14 chr2 30525420 30525703 -220162151 - AluJo SINE Alu -30 282 1 4236 173 71 46 chr2 30525703 30526259 -220161595 + L1MDa LINE L1 1989 2587 -3953 436 198 67 13 chr2 30526256 30526423 -220161431 + L1MA7 LINE L1 6003 6296 -4 * 827 158 0 43 chr2 30526470 30526609 -220161245 + FLAM_C SINE Alu 1 133 0 228 275 55 0 chr2 30526617 30526708 -220161146 + L1MDa LINE L1 2596 2691 -3849 1311 199 122 16 chr2 30526709 30527020 -220160834 + MER2 DNA MER2_type 2 345 0 1985 233 18 0 chr2 30527025 30527523 -220160331 + L1MDa LINE L1 2695 3201 -3339 1305 165 0 75 chr2 30527550 30527805 -220160049 - MER46A DNA MER2_type 0 236 1 233 191 0 0 chr2 30527854 30527896 -220159958 + LTR50 LTR ERVL 1 42 -753 2353 89 10 10 chr2 30527897 30528210 -220159644 - AluSq SINE Alu 0 313 1 24 0 0 0 chr2 30530240 30530264 -220157590 + AT_rich Low_complexity Low_complexity 1 24 0 739 134 21 260 chr2 30530585 30530912 -220156942 + L1MC3 LINE L1 6683 6877 -930 1337 184 37 61 chr2 30530912 30531206 -220156648 + AluJo SINE Alu 1 287 -25 739 134 21 260 chr2 30531206 30531244 -220156610 + L1MC3 LINE L1 6877 6922 -885 297 172 94 66 chr2 30531793 30531941 -220155913 + MIR SINE MIR 17 164 -64 202 184 0 0 chr2 30532238 30532276 -220155578 - L3b LINE CR1 -1 1582 1545 2294 95 10 0 chr2 30532392 30532688 -220155166 + AluSx SINE Alu 1 299 -13 772 213 79 0 chr2 30532716 30532880 -220154974 - MLT1E2 LTR MaLR 0 626 450 694 162 62 95 chr2 30532855 30533034 -220154820 - MLT1E2 LTR MaLR -423 203 31 * 436 314 39 7 chr2 30533556 30533709 -220154145 + L2 LINE L2 3156 3313 0 291 262 155 0 chr2 30534266 30534369 -220153485 - MER5A DNA MER1_type 0 189 71 2025 142 16 0 chr2 30535018 30535321 -220152533 + AluSg SINE Alu 1 308 -2 993 265 175 30 chr2 30535336 30535777 -220152077 + MLT1D LTR MaLR 1 505 0 24 32 0 0 chr2 30535986 30536017 -220151837 + AT_rich Low_complexity Low_complexity 1 31 0 443 279 110 23 chr2 30536065 30536366 -220151488 - L1ME4a LINE L1 -170 5951 5625 230 224 0 0 chr2 30536796 30536845 -220151009 + (TG)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr2 30537230 30537253 -220150601 + AT_rich Low_complexity Low_complexity 1 23 0 1226 246 21 3 chr2 30537291 30537580 -220150274 - L1ME1 LINE L1 -135 6031 5738 1150 223 52 25 chr2 30537583 30537946 -220149908 - L1M4 LINE L1 -2978 3168 2796 562 294 27 0 chr2 30538524 30538711 -220149143 - L1ME1 LINE L1 -1213 4933 4742 180 377 0 14 chr2 30538897 30538966 -220148888 + L2 LINE L2 3018 3085 -187 988 130 0 0 chr2 30539481 30539612 -220148242 - FLAM_C SINE Alu -2 131 1 1018 292 100 48 chr2 30539913 30540722 -220147132 + HAL1 LINE L1 18 868 -1639 378 279 56 39 chr2 30540723 30540956 -220146898 + HAL1 LINE L1 2271 2507 0 479 273 59 55 chr2 30542299 30542537 -220145317 + HAL1 LINE L1 2245 2483 -24 219 253 13 0 chr2 30542561 30542636 -220145218 + A-rich Low_complexity Low_complexity 1 76 0 334 243 22 88 chr2 30542641 30542777 -220145077 - MIR3 SINE MIR 0 208 82 455 209 8 217 chr2 30543056 30543177 -220144677 + MIR SINE MIR 45 190 -72 2167 109 33 10 chr2 30543177 30543480 -220144374 + AluSg SINE Alu 1 310 0 455 209 8 217 chr2 30543480 30543500 -220144354 + MIR SINE MIR 190 212 -50 836 114 0 100 chr2 30543500 30543640 -220144214 + FLAM_C SINE Alu 1 126 -7 198 0 0 0 chr2 30543640 30543662 -220144192 + (TA)n Simple_repeat Simple_repeat 2 23 0 455 209 8 217 chr2 30543662 30543781 -220144073 + MIR SINE MIR 210 252 -10 444 273 7 7 chr2 30544370 30544513 -220143341 + L1ME LINE L1 1025 1167 -5038 2335 202 55 36 chr2 30544598 30544648 -220143206 + L1MC4a LINE L1 7214 7262 -546 2501 137 39 42 chr2 30544648 30545080 -220142774 + MSTB1 LTR MaLR 1 431 -1 2335 202 55 36 chr2 30545080 30545612 -220142242 + L1MC4a LINE L1 7262 7807 -1 214 234 0 21 chr2 30545622 30545669 -220142185 + MIR SINE MIR 204 249 -13 529 202 9 26 chr2 30545882 30545996 -220141858 + MLT1H LTR MaLR 61 172 -377 577 270 103 33 chr2 30545996 30546363 -220141491 + L1ME LINE L1 1428 1820 -4576 332 284 65 40 chr2 30546579 30546780 -220141074 + L1ME LINE L1 2111 2316 -4080 576 299 102 43 chr2 30546800 30547647 -220140207 + L1ME LINE L1 4950 5863 -376 223 281 0 0 chr2 30547648 30547705 -220140149 - MIR SINE MIR 0 262 206 2234 102 0 10 chr2 30547710 30548013 -220139841 - AluSg1 SINE Alu -9 300 1 1178 237 93 64 chr2 30548471 30548859 -220138995 + MLT1I LTR MaLR 10 408 -1 315 324 29 22 chr2 30549278 30549414 -220138440 - L2 LINE L2 -4 3309 3173 2517 152 23 5 chr2 30549414 30549808 -220138046 + MER57A LTR ERV1 3 403 0 807 162 28 0 chr2 30549929 30550071 -220137783 + L1MB1 LINE L1 6023 6168 0 234 360 129 21 chr2 30550101 30550287 -220137567 - L2 LINE L2 -338 2976 2771 21 0 0 0 chr2 30550303 30550324 -220137530 + AT_rich Low_complexity Low_complexity 1 21 0 2012 146 0 19 chr2 30550324 30550639 -220137215 - AluJo SINE Alu -3 309 1 5737 149 4 22 chr2 30550679 30552516 -220135338 - L1PB1 LINE L1 -186 5965 4167 200 318 87 65 chr2 30552537 30552716 -220135138 - L2 LINE L2 -674 2640 2451 2282 134 95 42 chr2 30552716 30553148 -220134706 + MSTB2 LTR MaLR 1 455 -2 200 318 87 65 chr2 30553148 30553245 -220134609 - L2 LINE L2 -863 2451 2358 1028 256 83 44 chr2 30553336 30553696 -220134158 - MLT1A2 LTR MaLR 0 374 1 267 226 0 16 chr2 30554340 30554402 -220133452 + MER91 DNA MER1_type 80 140 0 226 271 93 19 chr2 30554497 30554604 -220133250 + MIR SINE MIR 148 262 0 325 211 234 31 chr2 30554904 30555032 -220132822 + L1MA10 LINE L1 6174 6327 -7 1868 86 4 4 chr2 30555935 30556179 -220131675 - AluSp SINE Alu -8 305 62 3502 143 31 31 chr2 30556451 30557026 -220130828 + Tigger4(Zombi) DNA MER2_type 1 575 -2156 3879 101 38 11 chr2 30557028 30557601 -220130253 + Tigger4(Zombi) DNA MER2_type 2143 2731 0 263 256 39 0 chr2 30557601 30557679 -220130175 - MLT1L LTR MaLR -330 285 205 393 324 107 51 chr2 30557917 30558019 -220129835 + L2 LINE L2 2584 2679 -593 2419 73 10 0 chr2 30558019 30558322 -220129532 - AluSq SINE Alu -7 306 1 393 324 107 51 chr2 30558322 30558677 -220129177 + L2 LINE L2 2679 3059 -213 283 120 0 9 chr2 30558688 30558738 -220129116 - MLT1I LTR MaLR -12 438 345 663 260 124 34 chr2 30558740 30559005 -220128849 - MLT1I LTR MaLR -23 386 98 447 305 85 34 chr2 30559169 30559405 -220128449 - MIR SINE MIR -13 249 2 268 305 59 51 chr2 30559542 30559660 -220128194 + L2 LINE L2 2966 3084 -188 490 305 142 23 chr2 30559922 30560431 -220127423 - L2 LINE L2 -96 3217 2654 641 257 222 20 chr2 30560464 30560734 -220127120 - L2 LINE L2 -869 2445 2090 1518 75 150 13 chr2 30560734 30560961 -220126893 + AluY SINE Alu 41 298 -13 641 257 222 20 chr2 30560961 30561032 -220126822 - L2 LINE L2 -1224 2090 2035 470 125 25 0 chr2 30561461 30561541 -220126313 + MER5A DNA MER1_type 108 189 0 278 265 120 34 chr2 30562077 30562194 -220125660 + MIR SINE MIR 18 144 -64 370 232 26 99 chr2 30562202 30562245 -220125609 - MER5A DNA MER1_type 0 189 144 460 279 0 0 chr2 30562245 30562356 -220125498 + MER81 DNA DNA 4 114 0 370 232 26 99 chr2 30562356 30562463 -220125391 - MER5A DNA MER1_type -45 144 50 426 218 112 95 chr2 30562504 30562580 -220125274 - MER5A DNA MER1_type -6 183 110 2353 57 3 7 chr2 30562580 30562880 -220124974 - AluY SINE Alu -12 299 1 426 218 112 95 chr2 30562880 30562982 -220124872 - MER5A DNA MER1_type -79 110 2 186 251 86 68 chr2 30563667 30563830 -220124024 - MIR3 SINE MIR -27 181 16 208 268 36 0 chr2 30564297 30564353 -220123501 + GA-rich Low_complexity Low_complexity 6 63 0 365 255 37 81 chr2 30566073 30566234 -220121620 + MIR SINE MIR 20 173 -89 2197 89 0 4 chr2 30566401 30566682 -220121172 + AluSq SINE Alu 1 280 -33 464 120 0 11 chr2 30566706 30566798 -220121056 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 589 294 71 6 chr2 30568483 30568653 -220119201 - MIR SINE MIR -80 182 2 986 230 174 17 chr2 30570677 30571038 -220116816 + MER57B LTR ERV1 17 434 0 693 200 69 7 chr2 30571137 30571282 -220116572 - MER5B DNA MER1_type -22 156 3 356 265 0 64 chr2 30571955 30572147 -220115707 + MIR SINE MIR 21 248 -14 2382 82 0 0 chr2 30573524 30573817 -220114037 + AluY SINE Alu 1 293 -18 1335 222 116 43 chr2 30574114 30574537 -220113317 + LTR16A1 LTR ERVL 1 454 -3 211 356 11 0 chr2 30574550 30574637 -220113217 - L2 LINE L2 -633 2681 2594 525 111 0 0 chr2 30575795 30575867 -220111987 + tRNA-Arg-CGC tRNA tRNA 1 72 -4 2072 130 0 3 chr2 30575887 30576180 -220111674 + AluSx SINE Alu 1 292 -20 29 28 0 0 chr2 30576180 30576216 -220111638 + AT_rich Low_complexity Low_complexity 1 36 0 665 217 37 16 chr2 30576731 30576920 -220110934 + MIR SINE MIR 20 212 -50 517 159 206 0 chr2 30577265 30577372 -220110482 - L2 LINE L2 0 3313 3185 658 264 26 0 chr2 30577614 30577807 -220110047 - MIR SINE MIR -2 260 63 766 236 134 86 chr2 30578432 30578910 -220108944 + HAL1 LINE L1 2 502 -2005 228 170 27 107 chr2 30579001 30579068 -220108786 - L1M4 LINE L1 -1700 4446 4390 2125 118 6 10 chr2 30579068 30579100 -220108754 - AluSx SINE Alu 0 312 281 180 0 0 0 chr2 30579100 30579120 -220108734 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2125 118 6 10 chr2 30579120 30579400 -220108454 - AluSx SINE Alu -31 281 1 228 170 27 107 chr2 30579400 30579444 -220108410 - L1M4 LINE L1 -1756 4390 4344 2027 119 11 4 chr2 30579491 30579805 -220108049 - AluSx SINE Alu 0 322 7 2560 44 29 3 chr2 30579859 30580174 -220107680 + L1PA7 LINE L1 5799 6121 -33 2402 68 3 17 chr2 30580601 30580897 -220106957 - AluSp SINE Alu -9 304 13 1191 256 40 54 chr2 30580918 30581512 -220106342 - L1M4 LINE L1 -1889 4257 3672 398 280 35 14 chr2 30581531 30581674 -220106180 + MIR SINE MIR 106 251 -11 310 306 8 25 chr2 30581986 30582107 -220105747 + MIR SINE MIR 33 151 -111 22028 142 63 15 chr2 30582111 30586555 -220101299 + L1M1 LINE L1 20 4683 -2882 688 157 37 30 chr2 30587033 30587156 -220100698 + BC200 scRNA scRNA 2 128 -72 2216 111 25 6 chr2 30587156 30587515 -220100339 + L1MA2 LINE L1 5939 6304 0 1882 156 0 30 chr2 30587591 30587892 -220099962 + AluJb SINE Alu 3 294 -18 211 167 0 0 chr2 30588054 30588090 -220099764 - MIR SINE MIR -170 92 57 1883 172 3 3 chr2 30588941 30589238 -220098616 + AluJb SINE Alu 1 297 -15 641 299 50 55 chr2 30589567 30589931 -220097923 - L2 LINE L2 -2 3270 2909 1681 153 0 11 chr2 30590130 30590405 -220097449 - AluJo SINE Alu -20 292 21 2173 123 0 3 chr2 30590572 30590872 -220096982 + AluSx SINE Alu 1 299 -13 763 197 11 49 chr2 30591074 30591257 -220096597 + L1ME1 LINE L1 5863 6038 -128 441 209 45 21 chr2 30591335 30591461 -220096393 + L1ME1 LINE L1 6052 6183 -1 2243 105 7 0 chr2 30592147 30592451 -220095403 + AluSx SINE Alu 1 306 -6 291 256 8 72 chr2 30592803 30592928 -220094926 - MIR SINE MIR -42 220 104 1674 164 63 7 chr2 30592938 30593224 -220094630 - AluJb SINE Alu -10 302 1 323 267 52 26 chr2 30594036 30594152 -220093702 + L1MEd LINE L1 59 177 -5942 317 268 106 39 chr2 30594371 30594550 -220093304 - MIR SINE MIR -44 218 28 22 42 0 0 chr2 30594922 30594946 -220092908 + AT_rich Low_complexity Low_complexity 1 24 0 697 134 9 7 chr2 30594946 30595179 -220092675 + AluJ SINE Alu 1 297 -15 241 209 163 7 chr2 30595341 30595494 -220092360 + L1MEd LINE L1 651 827 -5292 * 1752 233 29 57 chr2 30595484 30595791 -220092063 + L1ME2 LINE L1 5647 5935 -229 2240 96 3 0 chr2 30595791 30596104 -220091750 + AluSx SINE Alu 1 314 0 1752 233 29 57 chr2 30596104 30596319 -220091535 + L1ME2 LINE L1 5935 6155 -9 2204 100 20 3 chr2 30597387 30597686 -220090168 + AluSx SINE Alu 1 304 -8 1693 150 22 29 chr2 30597689 30598003 -220089851 - L1MA7 LINE L1 -130 6161 5850 357 111 0 0 chr2 30598003 30598063 -220089791 + L1MA7 LINE L1 6229 6291 0 2026 212 146 38 chr2 30598767 30599001 -220088853 + LTR50 LTR ERVL 52 259 -536 2245 110 7 0 chr2 30599001 30599293 -220088561 - AluSg SINE Alu -16 294 1 2026 212 146 38 chr2 30599293 30599614 -220088240 + LTR50 LTR ERVL 259 685 -110 198 0 0 0 chr2 30599614 30599636 -220088218 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2026 212 146 38 chr2 30599636 30599711 -220088143 + LTR50 LTR ERVL 685 751 -44 2216 55 136 7 chr2 30599711 30600046 -220087808 + L1PA5 LINE L1 5795 6169 0 286 213 53 107 chr2 30600047 30600112 -220087742 - L1M4 LINE L1 -1628 4518 4451 1958 136 45 45 chr2 30600112 30600444 -220087410 + MER1B DNA MER1_type 5 336 -1 286 213 53 107 chr2 30600444 30600528 -220087326 - L1M4 LINE L1 -1695 4451 4377 1610 190 68 61 chr2 30600538 30600637 -220087217 + L1M4 LINE L1 4520 4617 -1529 1989 129 0 20 chr2 30600637 30600939 -220086915 + AluJb SINE Alu 9 304 -8 1610 190 68 61 chr2 30600939 30601297 -220086557 + L1M4 LINE L1 4617 4980 -1166 2355 78 0 7 chr2 30601765 30602061 -220085793 + AluY SINE Alu 1 294 -17 384 355 87 35 chr2 30602107 30602451 -220085403 - L2 LINE L2 -13 3259 2898 1449 101 40 0 chr2 30602616 30602815 -220085039 + AluSp SINE Alu 105 311 -2 333 0 0 0 chr2 30603117 30603154 -220084700 + (TC)n Simple_repeat Simple_repeat 2 38 0 438 298 11 58 chr2 30603430 30603621 -220084233 + MER5A DNA MER1_type 2 183 -6 228 174 0 0 chr2 30604400 30604446 -220083408 - MIR SINE MIR -59 149 104 225 0 0 0 chr2 30604698 30604723 -220083131 + (A)n Simple_repeat Simple_repeat 1 25 0 1585 212 129 78 chr2 30604747 30605322 -220082532 - MER45C DNA AcHobo -349 604 1 732 152 144 2 chr2 30605921 30606084 -220081770 - L1MC1 LINE L1 -239 6094 5916 323 155 119 0 chr2 30606153 30606237 -220081617 + MIR SINE MIR 77 170 -92 438 122 0 37 chr2 30607193 30607275 -220080579 - L1MC1 LINE L1 -430 5903 5825 513 127 0 0 chr2 30607279 30607358 -220080496 - AluS SINE Alu -12 300 222 3151 123 34 23 chr2 30607358 30607913 -220079941 - LTR9B LTR ERV1 0 644 27 2449 59 3 13 chr2 30607913 30608216 -220079638 - AluY SINE Alu -11 300 1 3151 123 34 23 chr2 30608216 30608244 -220079610 - LTR9B LTR ERV1 -617 27 1 1399 139 0 10 chr2 30608250 30608458 -220079396 - AluSx SINE Alu -106 206 1 1498 212 130 39 chr2 30608502 30608988 -220078866 - LTR10B LTR ERV1 -5 542 13 1030 134 34 6 chr2 30608990 30609176 -220078678 - L1MA2 LINE L1 -473 5831 5632 231 304 63 13 chr2 30609434 30609513 -220078341 + L2 LINE L2 3138 3220 -52 214 256 77 13 chr2 30609733 30609811 -220078043 - MIR3 SINE MIR -113 95 13 2393 103 30 81 chr2 30609835 30610232 -220077622 - MER51B LTR ERV1 0 377 1 405 329 60 0 chr2 30610475 30610624 -220077230 - MIR SINE MIR -48 214 57 1583 192 12 35 chr2 30610658 30611012 -220076842 - MLT1C LTR MaLR -42 584 81 362 255 21 0 chr2 30611262 30611356 -220076498 - MLT1C LTR MaLR -371 96 1 268 287 78 23 chr2 30611499 30611628 -220076226 + MIR3 SINE MIR 50 185 -23 262 316 30 60 chr2 30612308 30612476 -220075378 - L1MC4a LINE L1 -1880 5928 5766 289 279 22 109 chr2 30613101 30613148 -220074706 - L1ME3A LINE L1 0 6170 6120 1952 186 9 0 chr2 30613148 30613493 -220074361 - MER7A DNA MER2_type 0 346 1 289 279 22 109 chr2 30613493 30613674 -220074180 - L1ME3A LINE L1 -50 6120 5962 234 0 0 0 chr2 30613732 30613758 -220074096 + (TA)n Simple_repeat Simple_repeat 1 26 0 2371 175 54 36 chr2 30614104 30614707 -220073147 - L1ME3A LINE L1 -364 5802 5189 2238 82 7 0 chr2 30614738 30615017 -220072837 - AluSq SINE Alu -32 281 1 1018 180 136 22 chr2 30615017 30615245 -220072609 - MLT1D LTR MaLR -52 453 200 4420 127 31 64 chr2 30615274 30615322 -220072532 - L1MB2 LINE L1 0 6171 6123 1519 156 7 81 chr2 30615322 30615630 -220072224 + AluJo SINE Alu 7 291 -21 4420 127 31 64 chr2 30615630 30615722 -220072132 - L1MB2 LINE L1 -48 6123 6029 2827 135 9 2 chr2 30615722 30616153 -220071701 + MER57B LTR ERV1 1 434 0 4420 127 31 64 chr2 30616153 30616822 -220071032 - L1MB2 LINE L1 -142 6029 5388 687 165 60 189 chr2 30616827 30617075 -220070779 - MLT1D LTR MaLR -289 216 1 2026 124 0 0 chr2 30617118 30617392 -220070462 + AluY SINE Alu 1 274 -37 195 42 0 0 chr2 30617396 30617420 -220070434 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1663 193 42 20 chr2 30617621 30617978 -220069876 + MLT1A1 LTR MaLR 1 365 0 357 43 0 0 chr2 30618043 30618090 -220069764 + (CA)n Simple_repeat Simple_repeat 2 48 0 868 144 0 8 chr2 30618951 30619083 -220068771 + FLAM_C SINE Alu 1 131 -12 341 292 36 18 chr2 30619292 30619460 -220068394 + L1ME1 LINE L1 3805 3975 -2171 2482 80 0 6 chr2 30619539 30619850 -220068004 + AluSc SINE Alu 1 309 0 235 245 20 59 chr2 30619850 30619952 -220067902 + L1ME1 LINE L1 4160 4257 -1889 2334 111 14 72 chr2 30620032 30620446 -220067408 - MLT1B LTR MaLR 0 390 1 268 283 17 92 chr2 30620518 30620691 -220067163 + L1ME1 LINE L1 4460 4619 -1527 639 169 52 1 chr2 30621076 30621216 -220066638 + MIR SINE MIR 75 219 -43 22 35 0 0 chr2 30621220 30621249 -220066605 + AT_rich Low_complexity Low_complexity 1 29 0 330 273 32 111 chr2 30621354 30621466 -220066388 + L1ME1 LINE L1 5681 5764 -357 2213 113 0 0 chr2 30621466 30621758 -220066096 + AluSx SINE Alu 1 292 -20 330 273 32 111 chr2 30621758 30621898 -220065956 + L1ME1 LINE L1 5764 5913 -208 2407 77 3 0 chr2 30622091 30622389 -220065465 + AluSg SINE Alu 1 299 -11 31 44 0 0 chr2 30623932 30623977 -220063877 + GC_rich Low_complexity Low_complexity 1 45 0 26 30 0 0 chr2 30624110 30624143 -220063711 + GC_rich Low_complexity Low_complexity 1 33 0 200 91 0 30 chr2 30624476 30624509 -220063345 + (CCG)n Simple_repeat Simple_repeat 2 33 0 485 211 149 40 chr2 30626916 30627128 -220060726 - MIR SINE MIR -7 255 24 1087 218 109 14 chr2 30627413 30627698 -220060156 - MER58B DNA MER1_type -8 333 22 663 262 26 19 chr2 30628554 30628801 -220059053 + L1ME1 LINE L1 5927 6161 -5 210 316 105 0 chr2 30629315 30629429 -220058425 + MIR SINE MIR 129 254 -8 2427 74 6 10 chr2 30629519 30629831 -220058023 - AluY SINE Alu 0 311 1 1095 179 262 3 chr2 30629854 30630144 -220057710 - MLT1A1 LTR MaLR 0 365 1 416 281 130 44 chr2 30630967 30631237 -220056617 - MER102b DNA MER1_type 0 341 49 2330 105 0 0 chr2 30631373 30631668 -220056186 - AluSx SINE Alu -17 295 1 198 264 127 36 chr2 30632568 30632678 -220055176 + MIR SINE MIR 74 193 -69 2368 92 0 0 chr2 30633632 30633926 -220053928 + AluSg SINE Alu 1 294 -16 814 216 43 0 chr2 30634481 30634643 -220053211 + MER58A DNA MER1_type 42 210 -14 22 0 0 0 chr2 30637492 30637514 -220050340 + AT_rich Low_complexity Low_complexity 1 22 0 225 253 84 53 chr2 30638413 30638508 -220049346 - MER5A DNA MER1_type -22 167 70 207 88 0 0 chr2 30638511 30638545 -220049309 + (T)n Simple_repeat Simple_repeat 1 34 0 914 223 116 37 chr2 30638573 30638815 -220049039 + MER21B LTR ERV1 3 263 -600 5039 170 51 11 chr2 30638858 30639800 -220048054 + MER4B-int LTR ERV1 3079 4058 -2700 2299 107 0 3 chr2 30640055 30640363 -220047491 + AluSg SINE Alu 1 307 -3 262 200 43 29 chr2 30640374 30640444 -220047410 + MIR SINE MIR 73 143 -65 26 30 0 0 chr2 30641703 30641736 -220046118 + AT_rich Low_complexity Low_complexity 1 33 0 329 257 76 0 chr2 30643152 30643257 -220044597 - MIR3 SINE MIR -48 160 48 926 221 14 5 chr2 30643339 30643561 -220044293 + MIR SINE MIR 9 232 -30 193 277 62 62 chr2 30643843 30643860 -220043994 - MIR SINE MIR -50 212 196 827 204 44 0 chr2 30643860 30644041 -220043813 - MER5A DNA MER1_type 0 189 1 193 277 62 62 chr2 30644041 30644153 -220043701 - MIR SINE MIR -65 197 83 732 199 24 6 chr2 30644860 30645026 -220042828 + MER5B DNA MER1_type 10 178 0 374 143 13 0 chr2 30645062 30645139 -220042715 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 312 367 38 9 chr2 30645246 30645456 -220042398 - L2 LINE L2 -463 2851 2636 238 206 0 48 chr2 30645599 30645662 -220042192 - MIR3 SINE MIR -135 73 14 843 134 0 22 chr2 30645884 30646018 -220041836 - FLAM_C SINE Alu -2 131 1 891 100 0 50 chr2 30646377 30646550 -220041304 - FLAM_C SINE Alu 0 166 1 205 281 288 13 chr2 30646719 30646872 -220040982 + MER91A DNA MER1_type 1 195 -1 476 239 35 1 chr2 30646914 30647045 -220040809 + MIR SINE MIR 4 137 -71 439 244 65 75 chr2 30647119 30647189 -220040665 + MIR SINE MIR 49 118 -144 2330 95 0 19 chr2 30647189 30647504 -220040350 - AluSc SINE Alu 0 309 1 439 244 65 75 chr2 30647504 30647634 -220040220 + MIR SINE MIR 118 247 -15 885 190 76 0 chr2 30647728 30647818 -220040036 + MLT1F LTR MaLR 345 427 -115 1857 169 54 23 chr2 30647818 30648172 -220039682 - MLT1A1 LTR MaLR 0 365 1 885 190 76 0 chr2 30648172 30648265 -220039589 + MLT1F LTR MaLR 427 542 0 2362 63 20 13 chr2 30648285 30648588 -220039266 + AluY SINE Alu 1 305 -6 205 136 68 23 chr2 30650097 30650141 -220037713 + L2 LINE L2 3265 3310 -3 250 250 0 0 chr2 30650212 30650272 -220037582 - L2 LINE L2 -4 3309 3250 1943 166 3 3 chr2 30650639 30650946 -220036908 - AluJb SINE Alu -5 307 1 767 224 13 0 chr2 30651630 30651782 -220036072 + MER45A DNA AcHobo 24 177 -1 397 256 29 39 chr2 30651782 30651962 -220035892 - MIR SINE MIR -63 145 12 23 54 0 0 chr2 30652262 30652299 -220035555 + AT_rich Low_complexity Low_complexity 1 37 0 359 274 212 6 chr2 30652636 30652829 -220035025 + MIR SINE MIR 31 261 -1 740 241 7 0 chr2 30652999 30653144 -220034710 + MER63A DNA MER1_type 53 198 -12 405 305 36 45 chr2 30653166 30653402 -220034452 + MIR SINE MIR 30 259 -3 2333 107 0 3 chr2 30653543 30653852 -220034002 - AluSg SINE Alu 0 310 3 602 250 100 5 chr2 30654230 30654430 -220033424 + MIR SINE MIR 36 254 -8 359 151 125 21 chr2 30655122 30655224 -220032630 + L1MC/D LINE L1 5717 5827 -304 2018 175 31 6 chr2 30656096 30656451 -220031403 - MLT1A1 LTR MaLR -1 364 1 1506 244 141 32 chr2 30656802 30657334 -220030520 - MLT1G3 LTR MaLR 0 590 1 291 289 10 10 chr2 30657817 30657921 -220029933 + MIR SINE MIR 101 204 -58 1183 150 10 25 chr2 30658252 30658435 -220029419 - AluSg/x SINE Alu -11 301 120 1502 114 0 10 chr2 30658435 30658637 -220029217 - AluSx SINE Alu -112 200 1 1183 150 10 25 chr2 30658637 30658653 -220029201 - AluSg/x SINE Alu -192 120 105 2276 81 7 7 chr2 30659067 30659386 -220028468 - AluSp SINE Alu 0 319 1 5913 218 40 29 chr2 30659678 30661431 -220026423 + L1MD1 LINE L1 2117 4385 -1761 2283 104 0 7 chr2 30661431 30661729 -220026125 + AluSx SINE Alu 1 296 -16 5913 218 40 29 chr2 30661729 30661884 -220025970 + L1MD1 LINE L1 4385 4537 -1609 1086 196 18 9 chr2 30661889 30662113 -220025741 + L1MD1 LINE L1 5603 5828 -414 963 128 13 13 chr2 30662113 30662250 -220025604 + AluSg/x SINE Alu 145 284 -28 961 101 0 13 chr2 30662250 30662409 -220025445 + (GGAA)n Simple_repeat Simple_repeat 3 159 0 963 128 13 13 chr2 30662409 30662420 -220025434 + AluSg/x SINE Alu 283 293 -19 1472 163 70 20 chr2 30662420 30662720 -220025134 + L1MD1 LINE L1 5819 6133 -109 1685 164 47 0 chr2 30662928 30663082 -220024772 - AluJb SINE Alu -24 288 114 216 0 0 0 chr2 30663082 30663106 -220024748 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1685 164 47 0 chr2 30663106 30663226 -220024628 - AluJb SINE Alu -198 114 1 397 307 132 27 chr2 30663305 30663676 -220024178 - L1MC4a LINE L1 -1898 5910 5501 701 154 0 8 chr2 30664084 30664201 -220023653 + FLAM_C SINE Alu 1 116 -17 21 36 0 0 chr2 30664201 30664229 -220023625 + AT_rich Low_complexity Low_complexity 1 28 0 532 321 9 5 chr2 30664608 30664823 -220023031 + LTR16B LTR ERVL 246 461 -3 277 263 53 0 chr2 30664954 30665030 -220022824 + MIR3 SINE MIR 99 178 -30 28 0 0 0 chr2 30665318 30665346 -220022508 + AT_rich Low_complexity Low_complexity 1 28 0 734 145 0 8 chr2 30665346 30665463 -220022391 - FLAM_C SINE Alu -17 116 1 1860 113 3 80 chr2 30665699 30666010 -220021844 + AluSx SINE Alu 2 288 -24 33 66 0 0 chr2 30666158 30666219 -220021635 + AT_rich Low_complexity Low_complexity 1 61 0 556 282 194 41 chr2 30666306 30667192 -220020662 + L2 LINE L2 2283 3312 -1 1994 130 40 13 chr2 30667213 30667513 -220020341 - AluJb SINE Alu -4 308 1 495 299 69 15 chr2 30667557 30667818 -220020036 - L1MC4a LINE L1 -1921 5887 5613 2557 64 0 0 chr2 30668040 30668337 -220019517 + AluY SINE Alu 1 297 -14 626 291 25 45 chr2 30668363 30668454 -220019400 + MIR SINE MIR 3 94 -168 3142 132 43 61 chr2 30668454 30669076 -220018778 - LTR36 LTR ERV1 0 611 1 626 291 25 45 chr2 30669076 30669228 -220018626 + MIR SINE MIR 94 241 -21 279 269 21 43 chr2 30671031 30671124 -220016730 + MLT1K LTR MaLR 477 567 -21 682 152 9 0 chr2 30671642 30671747 -220016107 - Tigger7 DNA MER2_type 0 2491 2386 703 142 49 195 chr2 30671748 30671953 -220015901 - Tigger7 DNA MER2_type -499 234 60 1351 164 102 58 chr2 30672887 30672951 -220014903 - MLT1D LTR MaLR 0 505 445 2301 100 3 0 chr2 30672951 30673252 -220014602 - AluSx SINE Alu -10 302 1 1351 164 102 58 chr2 30673252 30673480 -220014374 - MLT1D LTR MaLR -60 445 200 3171 120 23 13 chr2 30673509 30673557 -220014297 - L1MB2 LINE L1 0 6171 6125 1597 163 3 75 chr2 30673557 30673864 -220013990 + AluJo SINE Alu 7 291 -21 3171 120 23 13 chr2 30673864 30673956 -220013898 - L1MB2 LINE L1 -46 6125 6035 2827 135 9 2 chr2 30673956 30674387 -220013467 + MER57B LTR ERV1 1 434 0 3171 120 23 13 chr2 30674387 30674780 -220013074 - L1MB2 LINE L1 -136 6035 5644 292 274 44 53 chr2 30675369 30675435 -220012419 + MIR3 SINE MIR 86 152 -56 2098 129 0 3 chr2 30675435 30675737 -220012117 + AluSx SINE Alu 1 301 -11 292 274 44 53 chr2 30675737 30675783 -220012071 + MIR3 SINE MIR 152 197 -11 625 177 26 0 chr2 30676165 30676278 -220011576 + MLT1D LTR MaLR 345 460 -45 * 865 187 20 0 chr2 30676248 30676398 -220011456 - MLT1A1 LTR MaLR -28 337 185 559 243 102 69 chr2 30676674 30676738 -220011116 - L1MC5 LINE L1 -86 7875 7815 1688 170 2 88 chr2 30676738 30677137 -220010717 + MLT1A1 LTR MaLR 1 365 0 559 243 102 69 chr2 30677137 30677476 -220010378 - L1MC5 LINE L1 -146 7815 7459 1750 276 106 12 chr2 30677635 30678200 -220009654 - MLT2F LTR ERVL 0 663 46 2067 132 0 3 chr2 30678576 30678880 -220008974 - AluSg SINE Alu -7 303 1 236 209 23 105 chr2 30678985 30679071 -220008783 - MIR SINE MIR 0 262 184 856 199 144 34 chr2 30679290 30679526 -220008328 + MLT1H LTR MaLR 78 339 -210 965 226 78 68 chr2 30679855 30680341 -220007513 - L1ME4a LINE L1 -38 6083 5593 2156 125 0 3 chr2 30681256 30681567 -220006287 + AluSx SINE Alu 1 310 -2 356 346 46 0 chr2 30681695 30681848 -220006006 + MIR SINE MIR 73 232 -30 1840 153 20 3 chr2 30683343 30683638 -220004216 - AluSx SINE Alu -12 300 1 429 302 0 9 chr2 30683842 30683948 -220003906 - MER5B DNA MER1_type -72 106 2 419 294 63 16 chr2 30683998 30684124 -220003730 - L2 LINE L2 0 3272 3141 1870 138 0 0 chr2 30684588 30684927 -220002927 - AluSx SINE Alu 0 345 7 331 232 14 0 chr2 30685356 30685425 -220002429 - MLT1L LTR MaLR -374 241 172 779 163 77 77 chr2 30685443 30685523 -220002331 + MER106A DNA MER1_type 1 80 -156 1967 134 0 3 chr2 30685523 30685814 -220002040 + AluSx SINE Alu 2 291 -21 779 163 77 77 chr2 30685814 30685942 -220001912 + MER106A DNA MER1_type 79 209 -27 236 277 277 0 chr2 30686454 30686548 -220001306 + L2 LINE L2 3139 3258 -14 234 62 0 0 chr2 30686554 30686586 -220001268 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 246 309 12 12 chr2 30686589 30686673 -220001181 + MIR SINE MIR 23 108 -100 1364 193 59 3 chr2 30687032 30687201 -220000653 - AluJo SINE Alu -6 306 113 198 0 0 0 chr2 30687201 30687223 -220000631 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1364 193 59 3 chr2 30687223 30687343 -220000511 - AluJo SINE Alu -199 113 1 194 333 0 0 chr2 30687684 30687735 -220000119 - L2 LINE L2 -12 3260 3210 22 35 0 0 chr2 30687952 30687981 -219999873 + AT_rich Low_complexity Low_complexity 1 29 0 2524 51 0 6 chr2 30687999 30688311 -219999543 - AluY SINE Alu -1 310 1 851 163 0 15 chr2 30688523 30688658 -219999196 + FLAM_C SINE Alu 1 133 0 330 67 0 0 chr2 30688686 30688731 -219999123 + (CA)n Simple_repeat Simple_repeat 2 46 0 696 250 12 17 chr2 30688741 30688913 -219998941 - MER5B DNA MER1_type -7 171 1 286 274 22 97 chr2 30689505 30689552 -219998302 - L1ME3A LINE L1 0 6170 6121 2020 177 9 0 chr2 30689552 30689897 -219997957 - MER7A DNA MER2_type 0 346 1 286 274 22 97 chr2 30689897 30690075 -219997779 - L1ME3A LINE L1 -49 6121 5962 237 83 0 0 chr2 30690133 30690169 -219997685 + (TA)n Simple_repeat Simple_repeat 1 36 0 276 253 76 0 chr2 30690199 30690278 -219997576 - L1ME3A LINE L1 -665 5499 5415 333 280 42 56 chr2 30690287 30690430 -219997424 - MIR3 SINE MIR -4 204 64 233 246 116 0 chr2 30690584 30690653 -219997201 + MIR SINE MIR 27 103 -159 1053 154 53 14 chr2 30690653 30690861 -219996993 + MLT2C2 LTR ERVL 1 216 -248 2509 108 24 16 chr2 30691323 30691695 -219996159 + THE1C LTR MaLR 1 375 0 352 324 14 14 chr2 30692001 30692146 -219995708 - MIR3 SINE MIR -11 197 53 575 94 12 0 chr2 30692255 30692340 -219995514 - L1MC2 LINE L1 -149 6195 6110 2000 124 0 0 chr2 30692340 30692658 -219995196 - AluSx SINE Alu 0 318 1 1072 188 122 41 chr2 30694109 30694128 -219993726 + LTR37A LTR ERV1 1 17 -409 2077 81 7 45 chr2 30694128 30694436 -219993418 + AluSx SINE Alu 1 296 -16 1072 188 122 41 chr2 30694436 30694810 -219993044 + LTR37A LTR ERV1 17 426 0 2564 110 3 43 chr2 30695853 30695921 -219991933 - THE1C LTR MaLR 0 375 306 2307 71 0 0 chr2 30695921 30696216 -219991638 - AluY SINE Alu -16 295 1 2564 110 3 43 chr2 30696216 30696538 -219991316 - THE1C LTR MaLR -69 306 1 584 103 23 0 chr2 30696766 30696853 -219991001 + MER3 DNA MER1_type 21 109 -100 929 199 0 6 chr2 30696853 30697029 -219990825 + AluJb SINE Alu 130 304 -8 42 48 0 0 chr2 30697068 30697131 -219990723 + AT_rich Low_complexity Low_complexity 1 63 0 293 342 88 10 chr2 30697955 30698148 -219989706 + MIR SINE MIR 21 228 -34 204 354 53 9 chr2 30700723 30700836 -219987018 + L2 LINE L2 2634 2751 -563 3374 237 108 33 chr2 30700852 30701480 -219986374 + L1MEc LINE L1 612 1192 -5204 2266 93 0 0 chr2 30701480 30701781 -219986073 + AluY SINE Alu 1 301 -10 3374 237 108 33 chr2 30701781 30702716 -219985138 + L1MEc LINE L1 1192 2292 -4104 287 325 6 0 chr2 30702818 30702984 -219984870 + HAL1 LINE L1 1373 1539 -968 861 147 0 22 chr2 30702989 30703125 -219984729 + FLAM_C SINE Alu 1 133 0 325 349 175 0 chr2 30703133 30703299 -219984555 + L1MEc LINE L1 1543 1737 -4659 333 262 165 40 chr2 30703301 30703706 -219984148 + L1MEc LINE L1 3183 3638 -2577 2009 155 0 0 chr2 30703711 30704021 -219983833 + AluSg SINE Alu 1 310 0 1026 82 62 0 chr2 30704310 30704456 -219983398 + AluSp SINE Alu 149 303 -10 1716 142 58 88 chr2 30704722 30704772 -219983082 + MSTB1 LTR MaLR 1 51 -381 2416 57 0 0 chr2 30704772 30705068 -219982786 - AluY SINE Alu -15 296 1 1716 142 58 88 chr2 30705068 30705462 -219982392 + MSTB1 LTR MaLR 51 432 0 1727 147 28 7 chr2 30706021 30706306 -219981548 + AluJo SINE Alu 1 291 -21 877 107 7 7 chr2 30706343 30706493 -219981361 + (GGAGA)n Simple_repeat Simple_repeat 2 151 0 252 352 39 35 chr2 30706504 30706734 -219981120 + L1M4 LINE L1 4739 4969 -1177 315 289 192 0 chr2 30706856 30707012 -219980842 + L1M4 LINE L1 5205 5390 -756 240 286 87 7 chr2 30707553 30707673 -219980181 + MIR SINE MIR 29 162 -66 1934 101 73 0 chr2 30708519 30708807 -219979047 + AluSx SINE Alu 1 309 -3 275 181 95 114 chr2 30708939 30709044 -219978810 - MIR3 SINE MIR -10 198 96 1339 161 0 0 chr2 30710083 30710301 -219977553 + AluJo SINE Alu 6 223 -89 1961 135 0 7 chr2 30710640 30710943 -219976911 + AluJb SINE Alu 1 301 -11 25 51 0 0 chr2 30713248 30713287 -219974567 + AT_rich Low_complexity Low_complexity 1 39 0 2117 117 0 13 chr2 30713343 30713659 -219974195 - AluSq SINE Alu -1 312 1 256 239 158 83 chr2 30713694 30714054 -219973800 - L1ME4a LINE L1 -90 6031 5645 494 202 202 25 chr2 30714127 30714142 -219973712 - L1ME4a LINE L1 -11 6110 6099 2137 105 3 0 chr2 30714142 30714438 -219973416 - AluSx SINE Alu -15 297 1 494 202 202 25 chr2 30714438 30714665 -219973189 - L1ME4a LINE L1 -22 6099 5825 565 271 31 10 chr2 30714671 30714863 -219972991 - L1ME4a LINE L1 -347 5774 5579 252 271 145 68 chr2 30715578 30715992 -219971862 - L2 LINE L2 0 3272 2827 387 301 0 23 chr2 30716048 30716181 -219971673 - MER94 DNA DNA -1 133 4 326 269 48 0 chr2 30717265 30717369 -219970485 - MIR SINE MIR -122 140 32 338 265 53 37 chr2 30718073 30718251 -219969603 - L1MC/D LINE L1 -322 5833 5702 238 284 49 25 chr2 30719334 30719415 -219968439 + L3 LINE CR1 1494 1576 -1 621 256 70 62 chr2 30719635 30719700 -219968154 - MIR SINE MIR 0 262 199 2144 106 0 3 chr2 30719700 30720001 -219967853 - AluSg SINE Alu -10 300 1 621 256 70 62 chr2 30720001 30720193 -219967661 - MIR SINE MIR -63 199 3 947 254 187 36 chr2 30720663 30721880 -219965974 + L1ME3A LINE L1 4610 5953 -217 700 245 19 0 chr2 30722116 30722271 -219965583 + MLT1I LTR MaLR 1 158 -251 251 154 173 0 chr2 30722405 30722457 -219965397 + MLT1I LTR MaLR 340 400 -9 437 240 188 19 chr2 30723631 30723785 -219964069 - MER5A DNA MER1_type 0 189 10 311 270 0 50 chr2 30723893 30723993 -219963861 - MIR SINE MIR -64 198 104 311 355 32 26 chr2 30725685 30725840 -219962014 + MIR3 SINE MIR 24 179 -29 755 345 41 3 chr2 30725924 30726266 -219961588 + LTR16A LTR ERVL 1 355 -95 194 229 21 0 chr2 30727409 30727457 -219960397 - MIR SINE MIR -63 145 97 759 52 0 0 chr2 30728246 30728342 -219959512 + (GGAA)n Simple_repeat Simple_repeat 1 96 0 266 312 138 0 chr2 30729195 30729333 -219958521 + L2 LINE L2 2896 3052 -220 453 259 19 0 chr2 30729337 30729445 -219958409 - L2 LINE L2 -3 3269 3160 2422 70 10 6 chr2 30729742 30730054 -219957800 - AluSq SINE Alu 0 313 1 2242 113 0 7 chr2 30732030 30732331 -219955523 - AluSx SINE Alu -13 299 1 364 350 35 0 chr2 30732336 30732479 -219955375 + MIR SINE MIR 54 201 -61 1966 148 3 3 chr2 30732670 30732961 -219954893 - AluJb SINE Alu -21 291 1 634 298 31 11 chr2 30733399 30733590 -219954264 + MIR3 SINE MIR 8 202 -6 232 296 43 52 chr2 30733579 30733694 -219954160 + MIR SINE MIR 90 203 -59 * 430 255 0 0 chr2 30733784 30733882 -219953972 + MIR SINE MIR 49 146 -62 2175 100 21 4 chr2 30734046 30734367 -219953487 - AluSq SINE Alu 0 326 1 251 320 0 27 chr2 30736475 30736550 -219951304 + L3 LINE CR1 877 949 -628 4724 179 62 80 chr2 30736692 30737594 -219950260 + Charlie1a DNA MER1_type 42 910 -1851 1730 164 27 10 chr2 30737594 30737886 -219949968 + AluJo SINE Alu 1 297 -15 4724 179 62 80 chr2 30737886 30738423 -219949431 + Charlie1a DNA MER1_type 910 1455 0 2110 135 20 0 chr2 30738457 30738754 -219949100 + AluSx SINE Alu 1 303 -9 197 314 41 87 chr2 30738758 30738930 -219948924 + L3 LINE CR1 1175 1338 -239 447 272 72 14 chr2 30738940 30739105 -219948749 - MIR SINE MIR -61 147 8 242 351 101 7 chr2 30739098 30739246 -219948608 + L3 LINE CR1 1416 1577 0 * 1136 175 112 32 chr2 30739347 30739786 -219948068 - Charlie2 DNA MER1_type -129 2733 2260 2048 134 10 13 chr2 30739789 30740094 -219947760 - AluJo SINE Alu -8 304 1 610 295 49 31 chr2 30741185 30741409 -219946445 + MIR SINE MIR 34 261 -1 25 31 0 0 chr2 30742295 30742327 -219945527 + AT_rich Low_complexity Low_complexity 1 32 0 1699 75 0 5 chr2 30745506 30745720 -219942134 - AluSg/x SINE Alu -8 304 92 192 143 95 0 chr2 30746383 30746425 -219941429 + MIR SINE MIR 100 145 -117 182 327 18 0 chr2 30746456 30746511 -219941343 + MIR SINE MIR 18 73 -135 420 278 0 9 chr2 30747345 30747453 -219940401 + MIR3 SINE MIR 69 175 -33 2119 106 3 32 chr2 30747957 30748268 -219939586 - AluY SINE Alu -9 302 1 199 259 0 0 chr2 30748737 30748791 -219939063 + L2 LINE L2 3197 3250 -22 201 121 0 0 chr2 30749213 30749246 -219938608 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 192 233 47 0 chr2 30751748 30751791 -219936063 - L2 LINE L2 -6 3307 3263 279 301 68 25 chr2 30752123 30752286 -219935568 - L2 LINE L2 -575 2739 2570 3119 201 41 10 chr2 30752575 30752722 -219935132 + L1M4 LINE L1 4194 4335 -1811 2198 50 36 0 chr2 30752722 30753003 -219934851 + L1PA8 LINE L1 5882 6172 0 3119 201 41 10 chr2 30753003 30753583 -219934271 + L1M4 LINE L1 4335 4944 -1202 328 290 48 8 chr2 30753805 30753929 -219933925 + MIR SINE MIR 47 175 -87 433 331 49 16 chr2 30754241 30754425 -219933429 - L2 LINE L2 -269 3044 2855 987 261 55 0 chr2 30754718 30754956 -219932898 + MIR SINE MIR 11 261 -1 2478 90 3 0 chr2 30754958 30755268 -219932586 + AluSp SINE Alu 1 311 -2 2591 66 0 0 chr2 30755276 30755581 -219932273 + AluY SINE Alu 1 305 -6 2128 155 104 34 chr2 30755591 30756063 -219931791 + MLT1D LTR MaLR 1 505 0 184 269 30 60 chr2 30756097 30756164 -219931690 + L3 LINE CR1 1288 1352 -225 554 254 0 36 chr2 30756857 30757022 -219930832 - MER112 DNA MER1_type -101 159 1 2245 139 93 15 chr2 30757971 30758367 -219929487 - MSTA LTR MaLR -1 427 1 1573 228 45 37 chr2 30758613 30759104 -219928750 + Charlie4a DNA MER1_type 7 501 -7 334 257 9 19 chr2 30759537 30759642 -219928212 + MER81 DNA DNA 2 105 -9 6325 66 12 3 chr2 30759844 30760617 -219927237 + LTR17 LTR ERV1 1 780 0 649 221 134 0 chr2 30760674 30760891 -219926963 - L1ME3 LINE L1 -5 6157 5912 198 250 0 58 chr2 30761098 30761150 -219926704 - MIR SINE MIR -111 97 49 731 231 23 8 chr2 30761303 30761478 -219926376 + MER5B DNA MER1_type 2 186 -3 441 235 183 20 chr2 30761485 30761541 -219926313 - MER5A DNA MER1_type -6 183 137 2509 55 0 45 chr2 30761541 30761853 -219926001 + AluY SINE Alu 1 298 -13 441 235 183 20 chr2 30761853 30761949 -219925905 - MER5A DNA MER1_type -52 137 6 2163 215 38 14 chr2 30762789 30763246 -219924608 + MLT2B1 LTR ERVL 1 472 -48 213 39 0 0 chr2 30763246 30763272 -219924582 + (TG)n Simple_repeat Simple_repeat 2 27 0 2163 215 38 14 chr2 30763272 30763311 -219924543 + MLT2B1 LTR ERVL 472 509 -11 507 234 91 63 chr2 30763616 30763791 -219924063 + MIR SINE MIR 14 193 -69 2512 63 0 0 chr2 30765067 30765369 -219922485 - AluY SINE Alu -9 302 1 893 103 48 0 chr2 30766078 30766224 -219921630 - L1MB4 LINE L1 0 6180 6028 1701 197 6 3 chr2 30766227 30766582 -219921272 - L1MB4 LINE L1 -215 5965 5610 2593 77 0 0 chr2 30766582 30766893 -219920961 - AluY SINE Alu 0 311 1 304 145 58 29 chr2 30767039 30767108 -219920746 + MER96 DNA MER1_type? 1 71 -104 698 179 166 64 chr2 30767133 30767368 -219920486 - ORSL DNA AcHobo -8 267 9 665 262 0 0 chr2 30767400 30767549 -219920305 - MER96 DNA MER1_type? -24 151 3 516 179 125 9 chr2 30768086 30768198 -219919656 - L2 LINE L2 -4 3309 3185 529 260 66 48 chr2 30768307 30768534 -219919320 - L2 LINE L2 -123 3190 2960 1917 248 59 33 chr2 30768748 30769324 -219918530 + MLT1E LTR MaLR 3 593 0 954 297 148 65 chr2 30769369 30770338 -219917516 + L2 LINE L2 1212 2286 -1028 2291 107 3 7 chr2 30770338 30770647 -219917207 - AluSx SINE Alu -4 308 1 954 297 148 65 chr2 30770647 30770791 -219917063 + L2 LINE L2 2286 2417 -897 391 209 19 0 chr2 30770931 30771036 -219916818 + CT-rich Low_complexity Low_complexity 2 108 0 613 242 16 71 chr2 30771063 30771101 -219916753 + MER5B DNA MER1_type 7 46 -132 2577 43 0 23 chr2 30771101 30771404 -219916450 + AluY SINE Alu 1 296 -15 613 242 16 71 chr2 30771404 30771547 -219916307 + MER5B DNA MER1_type 46 178 0 533 292 180 43 chr2 30771547 30772140 -219915714 + L2 LINE L2 2620 3312 -1 261 286 26 103 chr2 30772172 30772406 -219915448 + L2 LINE L2 2941 3156 -116 329 279 25 0 chr2 30775694 30775773 -219912081 - L1MEc LINE L1 -3967 2429 2349 2141 146 0 0 chr2 30775773 30776081 -219911773 - AluSx SINE Alu -4 308 1 2216 114 17 0 chr2 30776189 30776487 -219911367 + AluSq SINE Alu 5 307 -6 1044 158 0 0 chr2 30776487 30776639 -219911215 + AluSg/x SINE Alu 134 285 -27 224 313 133 7 chr2 30776641 30776791 -219911063 - L2 LINE L2 -960 2354 2186 310 347 138 0 chr2 30777428 30777624 -219910230 + MIR SINE MIR 19 241 -21 * 694 257 24 34 chr2 30777616 30777822 -219910032 - MIR SINE MIR -2 260 57 515 226 189 0 chr2 30777864 30777893 -219909961 + MER5A DNA MER1_type 1 23 -166 201 74 0 0 chr2 30777893 30777920 -219909934 + (CAG)n Simple_repeat Simple_repeat 1 27 0 515 226 189 0 chr2 30777920 30778049 -219909805 + MER5A DNA MER1_type 23 189 0 938 144 0 0 chr2 30778174 30778313 -219909541 - FLAM_C SINE Alu -4 139 1 227 310 50 40 chr2 30778317 30778417 -219909437 - MIR3 SINE MIR -31 177 77 3806 80 20 0 chr2 30778886 30779387 -219908467 - LTR10D LTR ERV1 0 513 3 311 361 41 12 chr2 30780281 30780450 -219907404 + MIR SINE MIR 15 188 -74 228 255 235 0 chr2 30781504 30781606 -219906248 + L2 LINE L2 3188 3313 0 2898 214 60 59 chr2 30781713 30782499 -219905355 - L1MC3 LINE L1 -749 5397 5362 2638 62 3 0 chr2 30782499 30782805 -219905049 - AluSp SINE Alu -6 307 1 2898 214 60 59 chr2 30782805 30783656 -219904198 - L1MC3 LINE L1 -784 5362 4514 26 0 0 0 chr2 30883814 30883840 -219804014 + AT_rich Low_complexity Low_complexity 1 26 0 412 347 0 12 chr2 30885084 30885254 -219802600 - L3 LINE CR1 -121 1456 1289 913 196 16 5 chr2 30885458 30885642 -219802212 - MLT1C LTR MaLR 0 467 282 536 257 55 9 chr2 30886069 30886343 -219801511 - L1MD3 LINE L1 -1 7994 6023 245 230 101 36 chr2 30886852 30886991 -219800863 + HAL1 LINE L1 1950 2097 -410 497 208 94 52 chr2 30887025 30887179 -219800675 + L1MDa LINE L1 2419 2584 -3956 2218 102 10 0 chr2 30887179 30887473 -219800381 - AluY SINE Alu -14 297 1 497 208 94 52 chr2 30887473 30887510 -219800344 + L1MDa LINE L1 2584 2618 -3922 1042 218 62 38 chr2 30887510 30887799 -219800055 + MER82 DNA MER2_type 2 297 -356 207 322 34 42 chr2 30888280 30888398 -219799456 - MIR SINE MIR -133 129 13 344 331 105 57 chr2 30889215 30889323 -219798531 + L2 LINE L2 2465 2566 -747 1850 237 41 26 chr2 30889323 30889813 -219798041 - MLT1D LTR MaLR -4 501 5 344 331 105 57 chr2 30889813 30890522 -219797332 + L2 LINE L2 2566 3311 -2 566 155 7 92 chr2 30890628 30890770 -219797084 - THE1C LTR MaLR -19 356 227 22 70 0 0 chr2 30890897 30890940 -219796914 + GC_rich Low_complexity Low_complexity 1 43 0 1424 157 105 49 chr2 30891268 30891592 -219796262 + MER66A LTR ERV1 137 478 0 2028 171 53 29 chr2 30891592 30892043 -219795811 + L1MB8 LINE L1 5701 6162 -16 336 252 129 14 chr2 30892247 30892386 -219795468 + L1ME4a LINE L1 5966 6120 -1 1271 146 5 33 chr2 30892725 30892937 -219794917 - AluSg/x SINE Alu -16 296 91 2969 129 16 26 chr2 30893099 30893291 -219794563 - LOR1a LTR ERV1 0 497 305 405 0 0 0 chr2 30893291 30893336 -219794518 + (CA)n Simple_repeat Simple_repeat 2 46 0 2969 129 16 26 chr2 30893336 30893645 -219794209 - LOR1a LTR ERV1 -192 305 1 189 271 0 0 chr2 30894798 30894846 -219793008 - L3 LINE CR1 -6 1571 1524 2350 73 7 3 chr2 30894931 30895231 -219792623 + AluSx SINE Alu 1 301 -11 465 237 63 139 chr2 30895780 30896210 -219791644 - L1ME3A LINE L1 -7 6163 5767 1080 265 115 58 chr2 30897691 30898802 -219789052 - L1ME3A LINE L1 -2099 4047 2857 216 0 0 0 chr2 30898802 30898826 -219789028 + (TG)n Simple_repeat Simple_repeat 2 25 0 1080 265 115 58 chr2 30898826 30898951 -219788903 - L1ME3A LINE L1 -3289 2857 2741 233 229 0 14 chr2 30898985 30899055 -219788799 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 709 120 0 0 chr2 30899834 30899934 -219787920 + AluSp/q SINE Alu 194 293 -20 284 187 13 173 chr2 30899934 30900084 -219787770 - LTR41 LTR ERVL -63 710 585 672 237 0 53 chr2 30900338 30900528 -219787326 - LTR41 LTR ERVL -593 180 1 205 292 84 26 chr2 30900528 30900682 -219787172 - MIR SINE MIR -25 237 75 2155 115 7 0 chr2 30900754 30901050 -219786804 + AluSx SINE Alu 1 298 -14 319 262 77 36 chr2 30901253 30901394 -219786460 - MER5A DNA MER1_type -27 162 4 1183 197 33 12 chr2 30902865 30903109 -219784745 + L1MC1 LINE L1 6084 6332 -1 204 288 55 14 chr2 30903127 30903200 -219784654 + MIR SINE MIR 159 234 -28 325 261 90 0 chr2 30903633 30903744 -219784110 + MIR3 SINE MIR 12 132 -76 2469 84 0 0 chr2 30903838 30904149 -219783705 - AluY SINE Alu 0 311 1 421 302 20 7 chr2 30904609 30904758 -219783096 + MIR SINE MIR 53 203 -59 277 286 10 0 chr2 30905940 30906038 -219781816 + MIR SINE MIR 117 215 -47 1343 290 52 38 chr2 30907387 30908077 -219779777 + L1MC4a LINE L1 5348 6047 -1761 623 264 39 0 chr2 30908356 30908538 -219779316 + L1ME1 LINE L1 24 212 -6211 3157 248 74 45 chr2 30908949 30910879 -219776975 + L1ME1 LINE L1 791 2665 -4276 1888 185 5 78 chr2 30910879 30911300 -219776554 + MLT1B LTR MaLR 1 390 0 3157 248 74 45 chr2 30911300 30912271 -219775583 + L1ME1 LINE L1 2665 3947 -2994 2268 120 0 0 chr2 30912271 30912579 -219775275 + AluSq SINE Alu 1 308 -5 3157 248 74 45 chr2 30912579 30912691 -219775163 + L1ME1 LINE L1 3947 4054 -2887 3183 209 77 38 chr2 30912735 30913657 -219774197 + L1ME1 LINE L1 5229 6114 -847 2162 116 10 0 chr2 30913657 30913951 -219773903 + AluSx SINE Alu 3 299 -13 3183 209 77 38 chr2 30913951 30914068 -219773786 + L1ME1 LINE L1 6114 6225 -736 7927 52 37 1 chr2 30914068 30914355 -219773499 - LTR13 LTR ERVK 0 1007 732 222 37 0 0 chr2 30914355 30914382 -219773472 + (GA)n Simple_repeat Simple_repeat 2 28 0 7927 52 37 1 chr2 30914382 30915066 -219772788 - LTR13 LTR ERVK -275 732 1 3183 209 77 38 chr2 30915066 30915686 -219772168 + L1ME1 LINE L1 6225 6953 -8 190 316 79 0 chr2 30915742 30915818 -219772036 - MIR SINE MIR -161 101 20 446 287 41 26 chr2 30915855 30916050 -219771804 - MIR SINE MIR -6 256 59 269 296 118 25 chr2 30916689 30916892 -219770962 - L3 LINE CR1 -714 863 642 225 211 0 0 chr2 30917144 30917196 -219770658 + (TG)n Simple_repeat Simple_repeat 1 52 0 298 318 56 8 chr2 30917912 30918038 -219769816 - MIR SINE MIR -76 186 55 1130 219 162 21 chr2 30918422 30918583 -219769271 - MLT1A2 LTR MaLR 0 374 237 896 8 33 0 chr2 30918583 30918704 -219769150 + (GA)n Simple_repeat Simple_repeat 2 126 0 1130 219 162 21 chr2 30918704 30918870 -219768984 - MLT1A2 LTR MaLR -137 237 1 2086 195 72 9 chr2 30918941 30919388 -219768466 - MLT1D LTR MaLR -2 503 29 180 263 35 0 chr2 30922173 30922230 -219765624 - MIR SINE MIR -80 182 124 1796 206 52 14 chr2 30923255 30923693 -219764161 + Charlie4a DNA MER1_type 16 470 -38 2403 104 0 0 chr2 30923841 30924148 -219763706 + AluSx SINE Alu 1 307 -5 2118 115 7 3 chr2 30924548 30924843 -219763011 + AluSq SINE Alu 1 296 -17 319 296 197 0 chr2 30924888 30925091 -219762763 + MIR SINE MIR 8 250 -12 488 243 33 66 chr2 30925516 30925697 -219762157 + MER69A DNA AcHobo 3 177 0 240 259 0 47 chr2 30927100 30927185 -219760669 + MER5A DNA MER1_type 8 88 -101 1875 115 50 70 chr2 30928526 30928909 -219758945 + THE1C LTR MaLR 1 375 0 2330 100 0 0 chr2 30929956 30930266 -219757588 + AluSg SINE Alu 1 310 0 193 338 52 0 chr2 30930402 30930479 -219757375 - MIR SINE MIR -121 141 61 2276 123 71 66 chr2 30930659 30931083 -219756771 + MSTB LTR MaLR 1 426 0 1147 209 171 40 chr2 30931225 30931647 -219756207 - MLT1D LTR MaLR -10 495 19 691 197 15 0 chr2 30931670 30931802 -219756052 + Zaphod DNA AcHobo 3892 4025 -6 208 336 100 7 chr2 30932459 30932599 -219755255 - MIR3 SINE MIR -40 168 16 270 271 108 23 chr2 30932809 30932938 -219754916 - MIR SINE MIR -6 256 117 283 323 39 15 chr2 30932967 30933097 -219754757 - MIR SINE MIR 0 262 130 330 239 14 0 chr2 30934250 30934321 -219753533 + MER58 DNA MER1_type 2345 2416 -4 1038 274 80 23 chr2 30934445 30935091 -219752763 - L1ME LINE L1 -365 5797 5079 1556 164 11 18 chr2 30935095 30935381 -219752473 + AluJb SINE Alu 19 302 -10 495 266 41 35 chr2 30935694 30935984 -219751870 - L1ME LINE L1 -1470 4676 4385 2038 119 3 3 chr2 30936378 30936673 -219751181 + AluSx SINE Alu 1 295 -17 2249 64 0 0 chr2 30936723 30937027 -219750827 + AluY SINE Alu 1 304 0 1170 287 114 50 chr2 30937111 30938555 -219749299 - L1ME LINE L1 -1911 4235 2700 215 235 0 15 chr2 30938555 30938623 -219749231 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 361 256 11 107 chr2 30938855 30939125 -219748729 - L1ME LINE L1 -3788 2358 2115 3039 194 47 78 chr2 30939190 30939998 -219747856 - L1ME1 LINE L1 -5 6161 5416 2101 73 84 0 chr2 30939998 30940285 -219747569 - AluY SINE Alu 0 311 1 3039 194 47 78 chr2 30940285 30940808 -219747046 - L1ME1 LINE L1 -750 5416 4878 2355 263 100 61 chr2 30940835 30942220 -219745634 + L1MCc LINE L1 365 2081 -5041 2075 134 0 3 chr2 30942220 30942533 -219745321 + AluSx SINE Alu 1 312 0 2355 263 100 61 chr2 30942533 30943239 -219744615 + L1MCc LINE L1 2081 2758 -4364 982 310 146 45 chr2 30943595 30943832 -219744022 + L1MCc LINE L1 2716 2928 -4013 1752 143 7 52 chr2 30943832 30944139 -219743715 + AluSx SINE Alu 1 293 -19 982 310 146 45 chr2 30944139 30945291 -219742563 + L1MCc LINE L1 2928 4199 -2742 1000 200 133 105 chr2 30945296 30945686 -219742168 - MER57A LTR ERV1 0 403 3 195 42 0 0 chr2 30947020 30947044 -219740810 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 1655 170 49 46 chr2 30947204 30947551 -219740303 - MLT1A1 LTR MaLR 0 365 18 588 326 21 0 chr2 30948241 30948428 -219739426 - Charlie8 DNA MER1_type -2152 265 75 270 304 42 98 chr2 30948542 30948878 -219738976 + L2 LINE L2 2870 3186 -86 283 305 55 16 chr2 30950020 30950148 -219737706 - L2 LINE L2 -2 3311 3179 217 143 0 48 chr2 30952170 30952212 -219735642 + MIR SINE MIR 219 258 -4 * 247 259 0 0 chr2 30952207 30952261 -219735593 + MIR SINE MIR 81 134 -74 334 287 40 40 chr2 30952905 30953006 -219734848 - MIR SINE MIR -72 190 90 1796 261 5 34 chr2 30953592 30954006 -219733848 - MLT2E LTR ERVL -226 402 1 244 234 206 50 chr2 30954006 30954147 -219733707 + MIR SINE MIR 83 245 -17 2800 83 13 5 chr2 30954149 30954521 -219733333 + THE1C LTR MaLR 1 375 0 189 158 26 0 chr2 30954543 30954581 -219733273 + L2 LINE L2 3234 3272 0 1860 146 7 3 chr2 30954810 30955119 -219732735 + AluSx SINE Alu 1 310 -2 255 170 0 0 chr2 30955121 30955168 -219732686 + GA-rich Low_complexity Low_complexity 3 49 0 231 311 148 16 chr2 30955177 30955299 -219732555 + MIR3 SINE MIR 42 179 -29 416 259 132 57 chr2 30955549 30955761 -219732093 - MIR SINE MIR -11 251 24 391 284 116 64 chr2 30956501 30956751 -219731103 + L2 LINE L2 2630 2892 -422 211 277 85 31 chr2 30956955 30957085 -219730769 - MIR3 SINE MIR -27 181 45 737 200 0 53 chr2 30957632 30957802 -219730052 + MIR SINE MIR 16 176 -86 579 255 181 33 chr2 30957899 30958205 -219729649 + MLT1G1 LTR MaLR 183 595 0 293 277 50 20 chr2 30958205 30958306 -219729548 + MIR SINE MIR 159 262 0 182 328 16 0 chr2 30958316 30958377 -219729477 - MIR SINE MIR -71 191 130 264 275 12 12 chr2 30958443 30958523 -219729331 - MIR SINE MIR -134 128 49 196 290 87 0 chr2 30958656 30958725 -219729129 + MIR SINE MIR 77 151 -111 893 144 0 0 chr2 30958800 30958932 -219728922 - FLAM_C SINE Alu -1 132 1 357 315 9 9 chr2 30959435 30959543 -219728311 - L2 LINE L2 -285 3028 2921 2876 195 98 6 chr2 30959543 30960360 -219727494 - L1MC4a LINE L1 -62 7807 6842 244 368 9 0 chr2 30960387 30960493 -219727361 - MER5B DNA MER1_type -71 107 1 * 363 253 31 69 chr2 30960493 30960643 -219727211 - MIR3 SINE MIR -60 148 18 1576 189 45 57 chr2 30960706 30961267 -219726587 + Charlie1b DNA MER1_type 17 512 -11 244 245 0 0 chr2 30962213 30962262 -219725592 + MER5B DNA MER1_type 127 175 -3 884 200 73 0 chr2 30962306 30962471 -219725383 - MER45A DNA AcHobo -1 177 1 180 0 0 0 chr2 30963287 30963307 -219724547 + (T)n Simple_repeat Simple_repeat 1 20 0 1961 106 35 0 chr2 30963370 30963652 -219724202 - AluSx SINE Alu -20 292 1 238 167 0 0 chr2 30963785 30963827 -219724027 - MIR SINE MIR -63 145 104 539 266 43 0 chr2 30963857 30963996 -219723858 + MER5B DNA MER1_type 13 157 -21 183 161 0 0 chr2 30964347 30964378 -219723476 + L2 LINE L2 701 731 -2583 848 150 66 70 chr2 30964581 30964794 -219723060 - L1MB2 LINE L1 -268 5903 5692 381 299 63 54 chr2 30964814 30965035 -219722819 - L1MC/D LINE L1 -2018 5790 5568 100 0 0 9 chr2 30965210 30965227 -219722627 + AT_rich Low_complexity Low_complexity 1 17 -93 2129 112 0 0 chr2 30965227 30965514 -219722340 - AluSx SINE Alu -25 287 1 100 0 0 9 chr2 30965514 30965607 -219722247 + AT_rich Low_complexity Low_complexity 17 110 0 359 279 196 39 chr2 30966697 30967034 -219720820 + MLT1K LTR MaLR 2 391 -197 247 315 154 6 chr2 30967687 30967849 -219720005 + MLT1K LTR MaLR 397 582 -6 252 77 0 0 chr2 30969049 30969088 -219718766 + (AGGTG)n Simple_repeat Simple_repeat 1 39 0 240 111 0 0 chr2 30969782 30969818 -219718036 + (A)n Simple_repeat Simple_repeat 1 36 0 255 61 0 0 chr2 30970281 30970314 -219717540 + (A)n Simple_repeat Simple_repeat 1 33 0 567 210 50 0 chr2 30972621 30972740 -219715114 + FLAM_A SINE Alu 13 137 -5 215 289 96 58 chr2 30972837 30972941 -219714913 - L2 LINE L2 -41 3231 3124 260 337 114 37 chr2 30973142 30973492 -219714362 - L2 LINE L2 -555 2759 2383 * 290 284 184 0 chr2 30973487 30973596 -219714258 - MIR3 SINE MIR -14 194 66 749 228 84 10 chr2 30973684 30973886 -219713968 + L1ME2 LINE L1 5939 6155 -9 184 288 34 0 chr2 30974240 30974299 -219713555 + L3 LINE CR1 1265 1325 -252 2319 81 0 0 chr2 30974299 30974594 -219713260 + AluSq SINE Alu 1 295 -18 373 153 339 32 chr2 30975624 30975748 -219712106 + MIR SINE MIR 28 189 -73 221 95 0 48 chr2 30976310 30976352 -219711502 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 220 254 36 145 chr2 30977216 30977354 -219710500 - L2 LINE L2 -7 3265 3143 503 343 149 28 chr2 30979666 30980587 -219707267 - L2 LINE L2 -29 3243 2211 236 308 64 30 chr2 30982358 30982513 -219705341 + MIR SINE MIR 3 164 -76 181 300 130 30 chr2 30983637 30983737 -219704117 - MIR SINE MIR -56 152 43 544 245 138 0 chr2 30984269 30984428 -219703426 + MER5A DNA MER1_type 9 189 0 3822 80 19 13 chr2 30984632 30985160 -219702694 - L1PA14 LINE L1 -9 6152 5622 400 220 110 28 chr2 30985352 30985461 -219702393 - MIR SINE MIR -60 148 31 1225 162 44 9 chr2 30985712 30985940 -219701914 - MER46A DNA MER2_type 0 236 1 261 231 66 99 chr2 30985992 30986113 -219701741 - MIR SINE MIR -60 148 32 263 314 86 0 chr2 30987798 30987903 -219699951 + MIR SINE MIR 99 212 -50 2061 123 13 0 chr2 30988901 30989203 -219698651 + AluSx SINE Alu 1 306 -6 198 236 281 0 chr2 30991936 30992025 -219695829 - L2 LINE L2 -155 3117 3004 366 271 83 14 chr2 30992329 30992473 -219695381 - MER117 DNA MER1_type -38 159 6 298 283 97 0 chr2 30994058 30994171 -219693683 + L2 LINE L2 3144 3267 -5 399 299 108 0 chr2 30994406 30994563 -219693291 - MER91A DNA MER1_type -1 195 22 2188 110 0 0 chr2 30994706 30995014 -219692840 + AluSg SINE Alu 2 309 -1 308 127 18 0 chr2 30996184 30996239 -219691615 + (CA)n Simple_repeat Simple_repeat 1 56 0 421 280 105 17 chr2 30997039 30997091 -219690763 - MIR SINE MIR -1 261 215 360 0 0 0 chr2 30997091 30997131 -219690723 + (TG)n Simple_repeat Simple_repeat 2 41 0 421 280 105 17 chr2 30997131 30997317 -219690537 - MIR SINE MIR -47 215 2 218 242 47 94 chr2 30997805 30997933 -219689921 + L2 LINE L2 2684 2805 -509 190 315 188 13 chr2 30998904 30999053 -219688801 + L2 LINE L2 2652 2826 -488 218 287 129 0 chr2 30999484 30999585 -219688269 + L2 LINE L2 3158 3271 -1 204 297 108 47 chr2 30999750 30999898 -219687956 + MIR3 SINE MIR 7 163 -45 1031 256 20 16 chr2 31000026 31000272 -219687582 - MIR SINE MIR -9 253 7 709 128 120 8 chr2 31001468 31001601 -219686253 - MER5A DNA MER1_type -40 149 2 336 302 74 7 chr2 31004736 31004885 -219682969 + MIR3 SINE MIR 35 193 -15 498 284 103 17 chr2 31004954 31005186 -219682668 - L3 LINE CR1 -113 1464 1213 232 314 151 21 chr2 31005959 31006198 -219681656 + L2 LINE L2 1528 1797 -1517 434 351 52 30 chr2 31006204 31006606 -219681248 + L2 LINE L2 2551 2961 -353 5130 197 45 12 chr2 31006745 31008889 -219678965 - L1MB8 LINE L1 -1 6177 3958 321 281 53 35 chr2 31010054 31010168 -219677686 + MER91B DNA MER1_type 75 190 0 1413 257 137 25 chr2 31010531 31011215 -219676639 + HAL1 LINE L1 1720 2480 -27 19202 50 0 2 chr2 31013978 31017153 -219670701 + L1PA5 LINE L1 2967 6153 -1 252 154 11 165 chr2 31017416 31017507 -219670347 - LTR33A LTR ERVL 0 523 447 279 321 152 18 chr2 31018255 31018420 -219669434 - MER5A DNA MER1_type -2 187 1 2194 86 6 16 chr2 31019027 31019341 -219668513 - AluSq SINE Alu -2 311 1 209 319 69 14 chr2 31020184 31020256 -219667598 + L2 LINE L2 3197 3272 0 558 246 64 23 chr2 31020295 31020466 -219667388 + MIR3 SINE MIR 3 180 -28 378 0 0 0 chr2 31020742 31020784 -219667070 + (A)n Simple_repeat Simple_repeat 1 42 0 180 313 0 30 chr2 31020941 31021008 -219666846 + MIR SINE MIR 34 98 -110 1148 50 0 0 chr2 31021662 31021803 -219666051 - AluY SINE Alu -18 293 153 1958 126 27 0 chr2 31022160 31022454 -219665400 + AluSx SINE Alu 1 302 -10 472 210 55 105 chr2 31022505 31022584 -219665270 - LTR50 LTR ERVL 0 795 714 2130 110 3 0 chr2 31022584 31022876 -219664978 + AluSq SINE Alu 1 293 -20 472 210 55 105 chr2 31022876 31023034 -219664820 - LTR50 LTR ERVL -81 714 570 229 200 67 0 chr2 31023795 31023870 -219663984 + (TATAA)n Simple_repeat Simple_repeat 5 84 0 355 292 101 82 chr2 31025558 31025914 -219661940 - L2 LINE L2 -19 3253 2891 1323 140 0 10 chr2 31026790 31026997 -219660857 - AluSg/x SINE Alu -23 289 85 252 325 0 0 chr2 31027097 31027174 -219660680 - L2 LINE L2 -15 3298 3222 424 355 92 46 chr2 31027378 31027812 -219660042 - L2 LINE L2 -428 2886 2433 232 312 65 11 chr2 31028278 31028371 -219659483 + MIR SINE MIR 11 108 -154 382 275 37 18 chr2 31028469 31028578 -219659276 - MER5B DNA MER1_type -61 117 7 252 253 67 13 chr2 31029938 31030013 -219657841 + MIR3 SINE MIR 109 187 -21 456 309 60 12 chr2 31030370 31030489 -219657365 + MIR SINE MIR 86 257 -1 222 267 0 0 chr2 31030489 31030534 -219657320 + L2 LINE L2 3217 3261 -11 24 0 0 0 chr2 31030559 31030583 -219657271 + AT_rich Low_complexity Low_complexity 1 24 0 237 65 0 0 chr2 31032044 31032075 -219655779 + (T)n Simple_repeat Simple_repeat 1 31 0 2363 94 0 0 chr2 31032133 31032442 -219655412 + AluY SINE Alu 1 309 -2 1814 259 43 13 chr2 31033065 31033605 -219654249 - LTR38 LTR ERV1 0 556 1 21 82 0 0 chr2 31033768 31033817 -219654037 + AT_rich Low_complexity Low_complexity 1 49 0 895 299 53 38 chr2 31034872 31035270 -219652584 + L2 LINE L2 2816 3219 -94 2030 162 19 65 chr2 31035405 31035837 -219652017 + MLT2D LTR ERVL 1 412 -2 292 270 127 8 chr2 31035915 31036041 -219651813 + L1ME4a LINE L1 5967 6107 -14 23 0 0 0 chr2 31036764 31036787 -219651067 + AT_rich Low_complexity Low_complexity 1 23 0 576 118 129 0 chr2 31037793 31037886 -219649968 + FRAM SINE Alu 62 166 -10 323 269 45 135 chr2 31038330 31038408 -219649446 + MIR3 SINE MIR 28 111 -97 195 42 0 0 chr2 31038408 31038432 -219649422 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 637 219 0 0 chr2 31038435 31038549 -219649305 - FLAM_A SINE Alu -18 115 2 323 269 45 135 chr2 31038549 31038622 -219649232 + MIR3 SINE MIR 113 169 -39 2377 90 0 3 chr2 31039697 31039998 -219647856 + AluSq SINE Alu 1 300 -13 1884 124 7 49 chr2 31040303 31040610 -219647244 + AluSx SINE Alu 1 294 -18 383 0 21 0 chr2 31040614 31040661 -219647193 + (CA)n Simple_repeat Simple_repeat 2 49 0 1675 267 90 60 chr2 31041583 31042321 -219645533 - L1ME3 LINE L1 -2 6160 5392 2400 90 7 0 chr2 31042321 31042622 -219645232 - AluSx SINE Alu -9 303 1 1675 267 90 60 chr2 31042622 31042727 -219645127 - L1ME3 LINE L1 -770 5392 5292 562 291 23 18 chr2 31042814 31043034 -219644820 - L1ME3 LINE L1 -1028 5118 4898 22 35 0 0 chr2 31043040 31043069 -219644785 + AT_rich Low_complexity Low_complexity 1 29 0 2319 101 0 0 chr2 31043225 31043522 -219644332 + AluSq SINE Alu 1 297 -16 402 21 0 0 chr2 31043609 31043656 -219644198 + (CA)n Simple_repeat Simple_repeat 1 47 0 397 200 90 38 chr2 31043770 31043896 -219643958 - MER5C DNA MER1_type -30 294 176 2395 70 7 0 chr2 31043896 31044197 -219643657 + AluSp SINE Alu 1 303 -10 397 200 90 38 chr2 31044197 31044294 -219643560 - MER5C DNA MER1_type -148 176 1 986 206 14 28 chr2 31044627 31044845 -219643009 + MER58B DNA MER1_type 117 331 -10 1452 139 165 0 chr2 31044847 31045114 -219642740 + AluJb SINE Alu 2 312 0 559 296 54 50 chr2 31045615 31046094 -219641760 - HAL1 LINE L1 -847 1660 1180 822 254 102 8 chr2 31046261 31046497 -219641357 - MIR SINE MIR -1 261 4 2791 13 0 0 chr2 31047101 31047406 -219640448 - AluYb8 SINE Alu -12 306 2 362 169 0 0 chr2 31048815 31048874 -219638980 + L1MD3 LINE L1 6669 6727 -1268 1076 211 48 81 chr2 31048874 31049419 -219638435 + MLT1D LTR MaLR 1 505 0 3402 225 69 33 chr2 31049419 31049634 -219638220 + L1MC3 LINE L1 6701 6907 -878 1650 146 0 87 chr2 31049634 31049956 -219637898 + AluJo SINE Alu 1 294 -18 3402 225 69 33 chr2 31049956 31050780 -219637074 + L1MC3 LINE L1 6907 7778 -7 5401 91 16 3 chr2 31051982 31052738 -219635116 + MER4E LTR ERV1 1 766 0 356 277 200 29 chr2 31053090 31053440 -219634414 - MLT1L LTR MaLR -10 605 196 22 0 0 0 chr2 31054623 31054645 -219633209 + AT_rich Low_complexity Low_complexity 1 22 0 218 310 42 14 chr2 31056498 31056569 -219631285 + L3 LINE CR1 1501 1573 -4 435 257 20 33 chr2 31056632 31056784 -219631070 + L1ME3A LINE L1 20 169 -5901 3120 263 100 22 chr2 31056873 31058255 -219629599 + L1ME3A LINE L1 2912 4400 -1680 241 208 19 0 chr2 31058393 31058446 -219629408 + L1ME3A LINE L1 4661 4714 -1366 1103 275 78 6 chr2 31058461 31059178 -219628676 + L1ME3A LINE L1 4780 5560 -538 230 253 115 23 chr2 31059288 31059375 -219628479 + L1MC4a LINE L1 4741 4835 -1311 734 145 76 15 chr2 31059531 31059662 -219628192 - FRAM SINE Alu -14 162 24 453 283 158 42 chr2 31059934 31059978 -219627876 + L1MC4a LINE L1 5380 5417 -2391 2262 110 7 0 chr2 31059978 31060287 -219627567 + AluSq SINE Alu 1 311 -2 453 283 158 42 chr2 31060287 31060722 -219627132 + L1MC4a LINE L1 5417 5915 -1893 30 69 0 0 chr2 31060911 31060969 -219626885 + AT_rich Low_complexity Low_complexity 1 58 0 261 349 122 26 chr2 31060974 31061163 -219626691 + MIR SINE MIR 29 235 -27 853 176 28 50 chr2 31061510 31061692 -219626162 + FRAM SINE Alu 1 170 -6 2151 80 31 3 chr2 31061692 31061978 -219625876 + AluSc SINE Alu 1 294 -15 6598 201 30 27 chr2 31061992 31062281 -219625573 - L1 LINE L1 -2591 4257 3970 1866 113 51 3 chr2 31062281 31062573 -219625281 - AluSx SINE Alu -6 306 1 6598 201 30 27 chr2 31062573 31063385 -219624469 - L1 LINE L1 -2878 3970 3161 264 59 0 0 chr2 31063385 31063419 -219624435 + (TG)n Simple_repeat Simple_repeat 2 35 0 6598 201 30 27 chr2 31063419 31063540 -219624314 - L1 LINE L1 -3687 3161 3042 2770 13 0 0 chr2 31063540 31063841 -219624013 - AluYb8 SINE Alu -17 301 1 6598 201 30 27 chr2 31063841 31065493 -219622361 - L1 LINE L1 -3806 3042 1375 344 310 46 23 chr2 31065821 31065995 -219621859 - L1M4 LINE L1 -2632 3514 3337 651 247 70 26 chr2 31066065 31066292 -219621562 + MLT1G LTR MaLR 1 237 -353 1954 78 14 61 chr2 31066366 31066661 -219621193 + AluY SINE Alu 1 281 -30 495 0 0 0 chr2 31066665 31066720 -219621134 + (CA)n Simple_repeat Simple_repeat 2 56 0 466 237 63 139 chr2 31068679 31069109 -219618745 + L1ME3A LINE L1 5701 6097 -7 2365 83 0 3 chr2 31069656 31069956 -219617898 - AluSg SINE Alu -11 299 1 1365 231 29 0 chr2 31070096 31070377 -219617477 + AluJo SINE Alu 1 289 -13 183 191 21 64 chr2 31071187 31071234 -219616620 - L2 LINE L2 -7 3306 3262 196 339 46 0 chr2 31071240 31071305 -219616549 + L3 LINE CR1 1480 1547 -30 350 321 113 6 chr2 31071455 31071614 -219616240 + L3 LINE CR1 1391 1566 -11 444 216 144 0 chr2 31072681 31072792 -219615062 + MLT1J LTR MaLR 68 194 -317 205 186 0 0 chr2 31073081 31073124 -219614730 + A-rich Low_complexity Low_complexity 3 45 0 722 288 8 38 chr2 31073125 31073392 -219614462 - MIR SINE MIR -1 261 3 289 306 0 0 chr2 31073627 31073699 -219614155 - MIR3 SINE MIR -13 195 124 397 279 115 0 chr2 31074164 31074268 -219613586 + L2 LINE L2 3152 3267 -5 707 254 57 62 chr2 31074401 31074819 -219613035 + L1M4 LINE L1 1229 1653 -4898 1515 162 57 34 chr2 31074839 31075135 -219612719 - MER2 DNA MER2_type -4 341 39 1599 136 117 0 chr2 31075564 31075828 -219612026 + AluSx SINE Alu 1 295 -17 730 140 103 0 chr2 31076046 31076182 -219611672 - Tigger7 DNA MER2_type -24 2467 2318 1774 173 6 25 chr2 31076184 31076508 -219611346 - Tigger7 DNA MER2_type -414 319 2 1995 140 3 0 chr2 31077051 31077351 -219610503 - AluSc SINE Alu -8 301 1 255 173 0 39 chr2 31077529 31077581 -219610273 + L1MEc LINE L1 498 547 -5849 340 297 10 10 chr2 31077966 31078067 -219609787 - MIR3 SINE MIR -39 169 69 325 274 24 65 chr2 31078283 31078407 -219609447 - L2 LINE L2 -1 3271 3153 2338 201 25 98 chr2 31078568 31079141 -219608713 + L1ME1 LINE L1 5472 6086 -80 2142 100 4 0 chr2 31079141 31079421 -219608433 + AluSc SINE Alu 9 289 -20 2338 201 25 98 chr2 31079421 31079499 -219608355 + L1ME1 LINE L1 6086 6067 -99 4056 89 7 0 chr2 31079499 31080047 -219607807 - MER41A LTR ERV1 -2 552 1 2338 201 25 98 chr2 31080047 31080125 -219607729 + L1ME1 LINE L1 6066 6148 -18 25 0 0 0 chr2 31080125 31080150 -219607704 + AT_rich Low_complexity Low_complexity 1 25 0 832 339 8 0 chr2 31080231 31080470 -219607384 - MIR SINE MIR 0 262 22 4888 126 30 8 chr2 31080669 31081432 -219606422 - LTR17 LTR ERV1 0 780 1 2461 48 0 0 chr2 31081432 31081724 -219606130 - HERV17 LTR ERV1 0 8626 8335 596 53 0 0 chr2 31081714 31081790 -219606064 - HERV17 LTR ERV1 -1078 7548 7473 * 5142 49 18 0 chr2 31081773 31082401 -219605453 - HERV17 LTR ERV1 -4048 4578 3940 * 5499 98 27 10 chr2 31082383 31083243 -219604611 - Harlequin LTR ERV1 -5237 1659 737 4964 93 13 21 chr2 31083511 31084209 -219603645 - Harlequin LTR ERV1 -7919 707 16 5023 120 37 5 chr2 31084224 31084980 -219602874 - LTR17 LTR ERV1 0 780 1 1966 125 3 24 chr2 31086878 31087229 -219600625 - MER4A LTR ERV1 0 664 263 593 140 20 10 chr2 31087228 31087328 -219600526 - MER4A LTR ERV1 -563 101 1 * 259 205 0 26 chr2 31087597 31087675 -219600179 + (TA)n Simple_repeat Simple_repeat 1 76 0 407 372 64 6 chr2 31087762 31088259 -219599595 + L1MC4a LINE L1 5398 5923 -1885 1455 275 58 41 chr2 31088861 31089345 -219598509 + HAL1 LINE L1 143 639 -1868 1072 164 56 5 chr2 31089345 31089540 -219598314 + MER3 DNA MER1_type 5 209 0 1455 275 58 41 chr2 31089540 31089611 -219598243 + HAL1 LINE L1 639 707 -1800 628 95 0 0 chr2 31089615 31089699 -219598155 + AluS SINE Alu 1 84 -228 2393 255 74 39 chr2 31089707 31090852 -219597002 + HAL1 LINE L1 707 1891 -616 1877 143 31 0 chr2 31091070 31091356 -219596498 + AluSx SINE Alu 5 299 -13 7099 163 57 5 chr2 31091443 31093611 -219594243 + L1PA13 LINE L1 3931 6161 -2 23 33 0 0 chr2 31094563 31094593 -219593261 + AT_rich Low_complexity Low_complexity 1 30 0 803 245 51 39 chr2 31095124 31095381 -219592473 + L1ME3A LINE L1 5890 6149 -21 666 263 89 42 chr2 31095438 31095963 -219591891 + L1MC4a LINE L1 5328 5437 -860 22 0 0 0 chr2 31096597 31096619 -219591235 + AT_rich Low_complexity Low_complexity 1 22 0 182 114 105 29 chr2 31096719 31096824 -219591030 + (TATATG)n Simple_repeat Simple_repeat 2 114 0 264 100 0 0 chr2 31096824 31096864 -219590990 + (CA)n Simple_repeat Simple_repeat 2 41 0 715 118 0 17 chr2 31097493 31097612 -219590242 + L1MB8 LINE L1 5588 5704 -480 1694 172 103 48 chr2 31097681 31098124 -219589730 + MER66A LTR ERV1 97 478 0 1964 180 49 24 chr2 31098124 31098575 -219589279 + L1MB8 LINE L1 5701 6162 -16 318 252 129 14 chr2 31098779 31098918 -219588936 + L1ME4a LINE L1 5966 6120 -1 1298 146 0 33 chr2 31099257 31099470 -219588384 - AluSg/x SINE Alu -16 294 89 2889 128 16 26 chr2 31099632 31099824 -219588030 - LOR1a LTR ERV1 0 497 305 405 0 0 0 chr2 31099824 31099869 -219587985 + (CA)n Simple_repeat Simple_repeat 2 46 0 2889 128 16 26 chr2 31099869 31100178 -219587676 - LOR1a LTR ERV1 -192 305 1 211 271 0 0 chr2 31101331 31101379 -219586475 - L3 LINE CR1 -6 1571 1524 2202 101 0 7 chr2 31101464 31101772 -219586082 + AluSq SINE Alu 1 306 -7 257 241 120 0 chr2 31102178 31102286 -219585568 - MIR SINE MIR -50 212 92 405 165 0 92 chr2 31102311 31102420 -219585434 + MER61E LTR ERV1 1 99 -470 308 148 148 0 chr2 31102551 31102612 -219585242 + MER51A LTR ERV1 211 280 -354 * 1386 170 111 18 chr2 31102583 31102924 -219584930 + LTR25 LTR ERV1 415 787 -7 185 271 262 16 chr2 31104318 31104440 -219583414 - MIR SINE MIR -50 212 61 2342 110 128 11 chr2 31104651 31105033 -219582821 + MSTA LTR MaLR 2 428 0 277 270 16 0 chr2 31105310 31105373 -219582481 + MER20B DNA MER1_type 3 66 -717 452 209 60 55 chr2 31105420 31105602 -219582252 + MER20B DNA MER1_type 592 774 -9 287 164 18 18 chr2 31105609 31105664 -219582190 + MIR3 SINE MIR 151 205 -3 23 0 0 0 chr2 31105969 31105992 -219581862 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr2 31106096 31106134 -219581720 + AT_rich Low_complexity Low_complexity 1 38 0 185 156 0 44 chr2 31106304 31106349 -219581505 + (CATA)n Simple_repeat Simple_repeat 1 43 0 270 231 0 0 chr2 31106351 31106403 -219581451 + MER4-int LTR ERV1 1111 1162 -5436 1073 158 28 6 chr2 31106706 31106883 -219580971 - AluJo SINE Alu -12 300 120 190 118 59 0 chr2 31106894 31106945 -219580909 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 642 175 8 25 chr2 31106955 31107075 -219580779 - AluJo SINE Alu -184 118 1 488 231 177 14 chr2 31107224 31107371 -219580483 + L1MD2 LINE L1 5952 6122 -237 246 297 108 51 chr2 31107790 31107985 -219579869 - MIR SINE MIR -9 253 48 186 43 0 0 chr2 31108350 31108373 -219579481 + (T)n Simple_repeat Simple_repeat 1 23 0 201 318 143 19 chr2 31108392 31108653 -219579201 + L2 LINE L2 2763 3055 -217 648 212 171 45 chr2 31109425 31109647 -219578207 + MIR SINE MIR 2 251 -11 1158 189 117 14 chr2 31109846 31110137 -219577717 - MER33 DNA MER1_type -1 323 3 202 154 154 0 chr2 31110325 31110364 -219577490 - MIR SINE MIR -66 142 98 2156 89 48 10 chr2 31110455 31110747 -219577107 + AluY SINE Alu 1 303 -8 725 256 98 28 chr2 31110774 31110989 -219576865 + MIR SINE MIR 33 262 0 2493 62 3 0 chr2 31111296 31111600 -219576254 + AluY SINE Alu 1 305 -6 687 133 44 7 chr2 31112874 31113009 -219574845 - L1MB8 LINE L1 -1 6177 6038 291 250 91 23 chr2 31113389 31113477 -219574377 + L2 LINE L2 3197 3290 -23 439 253 180 35 chr2 31113994 31114287 -219573567 - MLT1J2 LTR MaLR -21 429 105 26 64 0 0 chr2 31114657 31114704 -219573150 + AT_rich Low_complexity Low_complexity 1 47 0 390 57 0 0 chr2 31115993 31116046 -219571808 + (CATAC)n Simple_repeat Simple_repeat 2 54 0 946 269 24 30 chr2 31116536 31116870 -219570984 - MARNA DNA Mariner -55 531 200 486 354 6 6 chr2 31116960 31117118 -219570736 - MIR3 SINE MIR -48 160 3 560 275 56 11 chr2 31117348 31117526 -219570328 - MIR SINE MIR -10 252 67 1612 147 34 31 chr2 31117570 31117606 -219570248 - L1MC3 LINE L1 -8 7777 7743 837 149 0 8 chr2 31117606 31117740 -219570114 - FLAM_C SINE Alu 0 133 1 1612 147 34 31 chr2 31117740 31118029 -219569825 - L1MC3 LINE L1 -42 7743 7451 186 297 0 31 chr2 31118039 31118103 -219569751 - MIR SINE MIR -194 68 7 562 158 0 53 chr2 31118149 31118263 -219569591 - FLAM_C SINE Alu -6 137 30 852 293 87 25 chr2 31119177 31119659 -219568195 + L2 LINE L2 1793 2304 -1010 267 302 102 66 chr2 31119666 31120147 -219567707 + L2 LINE L2 2691 3253 -60 583 273 0 7 chr2 31120201 31120340 -219567514 - FRAM SINE Alu -38 138 1 1611 157 75 14 chr2 31120452 31120732 -219567122 + AluJb SINE Alu 1 297 -15 392 294 46 0 chr2 31120990 31121099 -219566755 - MIR SINE MIR -65 143 30 1193 229 86 51 chr2 31121183 31121400 -219566454 - L1ME3 LINE L1 -27 6135 5927 1593 178 0 57 chr2 31121400 31121731 -219566123 + AluJo SINE Alu 1 312 0 1193 229 86 51 chr2 31121731 31121945 -219565909 - L1ME3 LINE L1 -235 5927 5689 279 79 0 0 chr2 31122229 31122267 -219565587 + (CCTA)n Simple_repeat Simple_repeat 1 38 0 813 176 81 0 chr2 31122281 31122417 -219565437 - FRAM SINE Alu -32 144 1 22 0 0 0 chr2 31122857 31122879 -219564975 + AT_rich Low_complexity Low_complexity 1 22 0 2719 164 15 19 chr2 31124132 31124595 -219563259 - MER1A DNA MER1_type 0 529 69 610 275 67 10 chr2 31124619 31124812 -219563042 + MIR SINE MIR 59 262 0 275 349 135 21 chr2 31124957 31125149 -219562705 - L3 LINE CR1 -11 1566 1353 1601 170 19 15 chr2 31125660 31125930 -219561924 + AluJo SINE Alu 13 283 -29 1911 165 0 10 chr2 31125995 31126298 -219561556 + AluJo SINE Alu 1 300 -12 603 146 82 27 chr2 31126411 31126521 -219561333 + FLAM_A SINE Alu 11 126 -16 619 216 158 52 chr2 31126559 31126925 -219560929 + LTR37A LTR ERV1 1 405 -21 212 267 23 30 chr2 31127665 31127796 -219560058 + (TA)n Simple_repeat Simple_repeat 1 130 0 2579 204 60 49 chr2 31128909 31129438 -219558416 + L1MB5 LINE L1 3999 4521 -1625 2218 118 0 0 chr2 31129438 31129734 -219558120 + AluSx SINE Alu 1 296 -16 2325 88 0 3 chr2 31129736 31130070 -219557784 + AluSg1 SINE Alu 1 333 0 2579 204 60 49 chr2 31130070 31130304 -219557550 + L1MB5 LINE L1 4521 4775 -1371 1041 177 61 139 chr2 31130305 31130615 -219557239 + LTR8 LTR ERV1 1 266 -425 592 209 45 115 chr2 31130662 31130906 -219556948 + LTR8A LTR ERV1 287 513 -214 992 124 0 7 chr2 31130918 31131055 -219556799 + AluSq/x SINE Alu 2 137 -176 1821 97 56 103 chr2 31131055 31131376 -219556478 + AluY SINE Alu 1 306 -5 2082 195 49 0 chr2 31131394 31132097 -219555757 + L1MB5 LINE L1 4812 5557 -617 1732 137 59 0 chr2 31132116 31132422 -219555432 + L1MB5 LINE L1 5851 6174 0 7974 32 3 3 chr2 31132522 31134008 -219553846 + L1PA5 LINE L1 4675 6154 0 21 36 0 0 chr2 31134118 31134146 -219553708 + AT_rich Low_complexity Low_complexity 1 28 0 275 278 132 62 chr2 31134151 31134295 -219553559 - MER5A DNA MER1_type -2 187 34 * 359 238 164 16 chr2 31134194 31134316 -219553538 + MER5A DNA MER1_type 50 189 0 761 214 15 0 chr2 31134552 31134683 -219553171 + FLAM_C SINE Alu 1 133 0 226 26 79 0 chr2 31134686 31134724 -219553130 + A-rich Low_complexity Low_complexity 5 45 0 1264 229 130 50 chr2 31135444 31135907 -219551947 - MLT1D LTR MaLR -5 500 1 703 169 81 37 chr2 31135937 31136073 -219551781 + FLAM_C SINE Alu 2 143 0 635 292 83 41 chr2 31136810 31137141 -219550713 + L1ME4a LINE L1 5479 5776 -345 1810 169 78 3 chr2 31137141 31137460 -219550394 + MER2 DNA MER2_type 1 343 -1 635 292 83 41 chr2 31137460 31137588 -219550266 + L1ME4a LINE L1 5776 5897 -224 431 143 83 0 chr2 31137607 31137691 -219550163 + L1ME4a LINE L1 5814 5904 -217 31 44 0 0 chr2 31137776 31137821 -219550033 + AT_rich Low_complexity Low_complexity 1 45 0 664 152 0 29 chr2 31137835 31137940 -219549914 - FLAM_A SINE Alu -15 127 26 263 298 33 16 chr2 31138204 31138325 -219549529 + MARNA DNA Mariner 273 395 -191 2747 10 0 7 chr2 31138874 31139182 -219548672 + AluY SINE Alu 1 306 -5 224 254 254 9 chr2 31139272 31139382 -219548472 + MIR SINE MIR 16 152 -110 792 188 0 0 chr2 31139394 31139527 -219548327 + FLAM_A SINE Alu 1 133 0 211 297 0 0 chr2 31139596 31139660 -219548194 + MIR SINE MIR 177 240 -22 1480 213 125 103 chr2 31139673 31140411 -219547443 - MER21B LTR ERV1 -109 754 1 180 321 104 8 chr2 31140638 31140772 -219547082 - L2 LINE L2 -954 2360 2214 257 352 71 31 chr2 31142983 31143179 -219544675 - MIR SINE MIR -20 242 39 1090 221 70 45 chr2 31143188 31143587 -219544267 - LTR37A LTR ERV1 0 426 18 22 0 0 0 chr2 31143789 31143811 -219544043 + AT_rich Low_complexity Low_complexity 1 22 0 2569 196 131 38 chr2 31144054 31144773 -219543081 + L1MDa LINE L1 19 804 -5736 622 245 88 5 chr2 31144802 31145018 -219542836 + L1M4 LINE L1 3393 3626 -2520 1832 148 6 38 chr2 31145020 31145338 -219542516 - AluJo SINE Alu -4 308 1 958 221 62 92 chr2 31145370 31145642 -219542212 + MLT1D LTR MaLR 204 505 0 1740 164 16 19 chr2 31146207 31146517 -219541337 + AluJo SINE Alu 1 309 -3 706 230 169 33 chr2 31146929 31147142 -219540712 + MIR SINE MIR 2 243 -19 194 301 108 24 chr2 31147280 31147363 -219540491 + L2 LINE L2 3136 3225 -47 1363 207 91 40 chr2 31148712 31149142 -219538712 - L1ME3 LINE L1 0 6162 5711 340 194 30 0 chr2 31149118 31149185 -219538669 - L1ME LINE L1 -361 5809 5741 * 340 194 30 0 chr2 31149187 31149254 -219538600 - L1ME LINE L1 -361 5809 5741 340 194 30 0 chr2 31149256 31149323 -219538531 - L1ME LINE L1 -361 5809 5741 342 194 30 0 chr2 31149325 31149392 -219538462 - L1ME LINE L1 -361 5809 5741 * 1516 235 45 88 chr2 31149391 31150166 -219537688 - L1ME LINE L1 -352 5810 5071 2329 93 3 0 chr2 31151153 31151455 -219536399 + AluSp SINE Alu 1 303 -10 23 33 0 0 chr2 31151673 31151703 -219536151 + AT_rich Low_complexity Low_complexity 1 30 0 547 248 47 13 chr2 31151809 31151958 -219535896 + MIR SINE MIR 75 228 -34 192 335 73 24 chr2 31152009 31152173 -219535681 - MIR SINE MIR -42 220 49 2831 10 0 3 chr2 31153843 31154155 -219533699 - AluYa5 SINE Alu 0 311 1 202 339 0 0 chr2 31154386 31154445 -219533409 - MIR SINE MIR -110 98 40 2104 136 7 0 chr2 31155369 31155677 -219532177 - AluJb SINE Alu -2 310 1 538 365 27 14 chr2 31155679 31155898 -219531956 - HERV16 LTR ERVL -1906 3090 2869 650 226 36 20 chr2 31155909 31156100 -219531754 + L1MD3 LINE L1 7593 7968 -2 328 286 52 0 chr2 31156102 31156179 -219531675 - HERV16 LTR ERVL -2135 2861 2781 1097 102 0 32 chr2 31156183 31156340 -219531514 - Charlie3 DNA MER1_type -5 2705 2554 955 275 75 36 chr2 31157072 31157129 -219530725 + LTR33 LTR ERVL 2 55 -466 2001 130 3 3 chr2 31157129 31157430 -219530424 - AluSp SINE Alu -12 301 1 955 275 75 36 chr2 31157430 31157867 -219529987 + LTR33 LTR ERVL 55 515 -6 346 279 61 28 chr2 31158024 31158212 -219529642 - MLT1L LTR MaLR 0 573 334 338 150 98 94 chr2 31158202 31158333 -219529521 - AluJo/FRAM SINE Alu -43 259 181 * 676 202 48 16 chr2 31158333 31158457 -219529397 - FLAM_A SINE Alu -14 128 1 484 226 120 23 chr2 31158459 31158592 -219529262 - MLT1L LTR MaLR -156 459 314 1933 171 0 0 chr2 31158597 31158902 -219528952 + AluSx SINE Alu 1 305 -7 2392 86 7 0 chr2 31159058 31159362 -219528492 - AluSp SINE Alu -7 306 1 1525 183 147 3 chr2 31159366 31159700 -219528154 + MER74A LTR ERVL 14 395 -163 710 152 65 43 chr2 31159702 31159732 -219528122 - FLAM_C SINE Alu -170 142 114 1514 94 10 0 chr2 31159732 31159934 -219527920 + AluSp SINE Alu 100 303 -10 710 152 65 43 chr2 31159934 31160041 -219527813 - FLAM_C SINE Alu -198 114 2 673 226 63 0 chr2 31160044 31160203 -219527651 + MER74A LTR ERVL 390 558 0 189 250 111 0 chr2 31160497 31160569 -219527285 - MIR SINE MIR -65 197 118 2516 193 36 22 chr2 31160574 31161072 -219526782 - MLT1D LTR MaLR 0 505 1 1670 176 109 40 chr2 31161073 31161449 -219526405 - MLT1D LTR MaLR -103 402 1 629 382 9 73 chr2 31161449 31161615 -219526239 + L1MA10 LINE L1 5948 6123 -208 2568 93 5 86 chr2 31161615 31161967 -219525887 + THE1C LTR MaLR 1 380 5 2324 68 0 4 chr2 31161967 31162248 -219525606 + AluY SINE Alu 1 280 -31 180 0 0 0 chr2 31162251 31162271 -219525583 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2568 93 5 86 chr2 31162271 31162322 -219525532 + THE1C LTR MaLR 321 375 0 629 382 9 73 chr2 31162322 31162377 -219525477 + L1MA10 LINE L1 6123 6326 -5 22 0 0 0 chr2 31163453 31163475 -219524379 + AT_rich Low_complexity Low_complexity 1 22 0 498 260 71 41 chr2 31163623 31163792 -219524062 + MIR SINE MIR 41 214 -48 209 232 134 49 chr2 31164048 31164130 -219523724 + MIR3 SINE MIR 97 185 -23 571 239 142 13 chr2 31164489 31164644 -219523210 - MER5B DNA MER1_type -3 175 1 275 288 186 17 chr2 31164779 31164956 -219522898 + MIR SINE MIR 6 212 -50 1427 181 168 3 chr2 31165161 31165453 -219522401 + MLT1A1 LTR MaLR 1 340 -25 2179 112 3 19 chr2 31165456 31165770 -219522084 - AluSx SINE Alu -1 311 3 1633 174 11 3 chr2 31165781 31166068 -219521786 - AluJb SINE Alu -23 289 1 229 238 0 0 chr2 31166070 31166112 -219521742 + MLT1A1 LTR MaLR 333 374 0 184 253 114 0 chr2 31166200 31166279 -219521575 + L2 LINE L2 3185 3272 0 439 225 125 42 chr2 31166571 31166811 -219521043 - L1ME4a LINE L1 0 6121 5862 503 208 44 153 chr2 31167838 31168112 -219519742 - HAL1 LINE L1 -14 2493 2250 371 154 0 0 chr2 31168123 31168188 -219519666 - L1MA10 LINE L1 -6 6328 6264 909 142 7 7 chr2 31168188 31168329 -219519525 + AluJo SINE Alu 2 142 -170 581 41 31 20 chr2 31168346 31168444 -219519410 + (GAAA)n Simple_repeat Simple_repeat 4 102 0 2797 183 58 106 chr2 31168453 31168868 -219518986 + L1ME1 LINE L1 5352 5749 -417 230 53 132 0 chr2 31168868 31168906 -219518948 - MADE1 DNA Mariner -37 43 1 2797 183 58 106 chr2 31168906 31169261 -219518593 + L1ME1 LINE L1 5749 6120 -46 1795 161 3 30 chr2 31169275 31169580 -219518274 - AluJo SINE Alu -15 297 1 29 60 0 0 chr2 31169605 31169655 -219518199 + AT_rich Low_complexity Low_complexity 1 50 0 634 285 28 11 chr2 31169699 31169924 -219517930 + L1MC4 LINE L1 7403 7700 -295 553 247 25 12 chr2 31170087 31170245 -219517609 - MER21B LTR ERV1 -388 543 329 3027 203 48 25 chr2 31170245 31170278 -219517576 - L1M4 LINE L1 -805 5341 5310 2585 61 0 0 chr2 31170278 31170589 -219517265 - AluY SINE Alu 0 311 1 3027 203 48 25 chr2 31170589 31171344 -219516510 - L1M4 LINE L1 -836 5310 4535 986 118 0 22 chr2 31171367 31171503 -219516351 + FLAM_C SINE Alu 1 133 0 516 323 91 0 chr2 31171576 31171762 -219516092 - MIR SINE MIR -3 259 57 189 0 0 0 chr2 31171938 31171959 -219515895 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 261 139 0 0 chr2 31172054 31172097 -219515757 + (T)n Simple_repeat Simple_repeat 1 43 0 1691 170 24 14 chr2 31174170 31174464 -219513390 + AluJb SINE Alu 1 297 -15 237 180 0 0 chr2 31174625 31174675 -219513179 + (CAT)n Simple_repeat Simple_repeat 2 51 0 422 304 101 16 chr2 31174711 31174914 -219512940 - MIR SINE MIR -48 214 4 183 86 0 86 chr2 31174974 31175009 -219512845 + L2 LINE L2 3270 3301 -12 375 134 0 45 chr2 31175110 31175177 -219512677 - Alu SINE Alu -7 293 230 2638 65 0 0 chr2 31175181 31175490 -219512364 - AluSc SINE Alu 0 309 1 414 0 0 0 chr2 31176171 31176217 -219511637 + (TG)n Simple_repeat Simple_repeat 1 46 0 232 224 0 0 chr2 31176736 31176785 -219511069 + L2 LINE L2 3224 3272 0 294 303 15 30 chr2 31176926 31177058 -219510796 - L2 LINE L2 0 3313 3184 2205 96 3 7 chr2 31177064 31177367 -219510487 + AluY SINE Alu 1 302 -9 2446 208 59 6 chr2 31177380 31177889 -219509965 - MER45B DNA AcHobo -3 1037 502 660 170 88 82 chr2 31177896 31178001 -219509853 + MER45B DNA AcHobo 348 456 -584 2068 139 0 3 chr2 31178001 31178302 -219509552 - AluSx SINE Alu -12 300 1 660 170 88 82 chr2 31178302 31178343 -219509511 + MER45B DNA AcHobo 456 495 -545 241 275 244 38 chr2 31179887 31180018 -219507836 + MIR SINE MIR 27 184 -78 431 308 75 45 chr2 31180822 31181410 -219506444 + L1ME4a LINE L1 5269 5883 -238 1693 165 3 52 chr2 31181410 31181738 -219506116 + AluJo SINE Alu 1 312 0 431 308 75 45 chr2 31181738 31181811 -219506043 + L1ME4a LINE L1 5883 5952 -169 31 0 0 0 chr2 31181811 31181842 -219506012 + AT_rich Low_complexity Low_complexity 1 31 0 291 209 0 0 chr2 31181942 31182057 -219505797 + G-rich Low_complexity Low_complexity 1 115 0 363 195 0 0 chr2 31182078 31182201 -219505653 + G-rich Low_complexity Low_complexity 1 123 0 36 0 0 0 chr2 31182414 31182450 -219505404 + AT_rich Low_complexity Low_complexity 1 36 0 5301 152 36 29 chr2 31182606 31183222 -219504632 - L1MA8 LINE L1 -4 6287 5660 2346 94 3 3 chr2 31183222 31183529 -219504325 - AluSx SINE Alu -5 307 1 5301 152 36 29 chr2 31183529 31183879 -219503975 - L1MA8 LINE L1 -631 5660 5314 769 172 0 39 chr2 31183893 31184021 -219503833 - FLAM_C SINE Alu -18 125 3 343 128 0 116 chr2 31184021 31184107 -219503747 - L1MA8 LINE L1 -979 5333 5258 208 272 49 0 chr2 31184910 31184991 -219502863 + (GGATG)n Simple_repeat Simple_repeat 2 86 0 783 231 7 0 chr2 31185148 31185338 -219502516 - FRAM SINE Alu 0 189 1 1195 184 90 20 chr2 31185380 31185516 -219502338 - AluJo SINE Alu -39 273 148 194 0 39 0 chr2 31185516 31185542 -219502312 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1195 184 90 20 chr2 31185542 31185660 -219502194 - AluJo SINE Alu -164 148 1 4797 175 17 52 chr2 31185867 31187246 -219500608 + L1MB7 LINE L1 4850 6184 0 295 299 15 15 chr2 31187545 31187679 -219500175 - L2 LINE L2 -214 3058 2925 1938 114 50 0 chr2 31187925 31188205 -219499649 - AluSx SINE Alu -16 296 3 2551 56 0 7 chr2 31190244 31190548 -219497306 - AluY SINE Alu -8 303 2 327 78 0 0 chr2 31191735 31191786 -219496068 + (CA)n Simple_repeat Simple_repeat 2 52 0 427 269 86 16 chr2 31191809 31191991 -219495863 + MIR SINE MIR 3 192 -63 378 0 0 0 chr2 31193564 31193606 -219494248 + (CA)n Simple_repeat Simple_repeat 2 43 0 844 169 0 0 chr2 31194561 31194718 -219493136 - FLAM_C SINE Alu 0 158 2 379 294 55 18 chr2 31197448 31197611 -219490243 - MIR3 SINE MIR -7 201 33 237 65 0 0 chr2 31198118 31198149 -219489705 + (CA)n Simple_repeat Simple_repeat 1 31 0 226 328 24 24 chr2 31198347 31198472 -219489382 + MIR SINE MIR 14 138 -124 362 244 26 58 chr2 31199385 31199541 -219488313 - L3 LINE CR1 -297 1280 1130 439 279 194 37 chr2 31200051 31200345 -219487509 - MLT1K LTR MaLR 0 588 249 22 0 0 0 chr2 31202159 31202181 -219485673 + AT_rich Low_complexity Low_complexity 1 22 0 763 195 84 0 chr2 31202295 31202449 -219485405 - L1PB4 LINE L1 -22 6134 5968 304 81 44 66 chr2 31202664 31202800 -219485054 + (TTATA)n Simple_repeat Simple_repeat 1 133 0 270 263 12 0 chr2 31202805 31202885 -219484969 - L1MB8 LINE L1 -15 6163 6083 189 0 0 0 chr2 31202946 31202967 -219484887 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 344 232 155 48 chr2 31203110 31203278 -219484576 - MIR SINE MIR -51 211 26 699 261 109 12 chr2 31203860 31204069 -219483785 + L1ME LINE L1 5464 5725 -396 1576 152 10 84 chr2 31204069 31204379 -219483475 - AluJo SINE Alu -25 287 1 699 261 109 12 chr2 31204379 31204484 -219483370 + L1ME LINE L1 5725 5818 -303 393 281 104 10 chr2 31204560 31204752 -219483102 - MIR SINE MIR -1 261 52 181 264 19 19 chr2 31204784 31204837 -219483017 + L3 LINE CR1 464 516 -1061 375 202 121 110 chr2 31205320 31205433 -219482421 + MER69A DNA AcHobo 1 118 -2408 1882 150 41 0 chr2 31205433 31205726 -219482128 + AluJb SINE Alu 1 305 -7 375 202 121 110 chr2 31205726 31205785 -219482069 + MER69A DNA AcHobo 118 175 -2 2470 84 3 0 chr2 31206524 31206833 -219481021 + AluSq SINE Alu 1 310 -3 324 273 25 16 chr2 31207028 31207149 -219480705 + GA-rich Low_complexity Low_complexity 2 123 0 1888 132 25 4 chr2 31208257 31208555 -219479299 - AluSx SINE Alu 0 304 1 1992 134 0 21 chr2 31208572 31208863 -219478991 - AluSx SINE Alu -27 285 1 411 289 62 16 chr2 31208878 31209072 -219478782 + MIR SINE MIR 54 256 -6 192 256 39 51 chr2 31209220 31209298 -219478556 + MIR SINE MIR 130 206 -56 626 126 50 8 chr2 31209437 31209556 -219478298 - L1MB2 LINE L1 -15 6156 6033 305 219 57 67 chr2 31210258 31210363 -219477491 + MIR SINE MIR 81 184 -78 2195 114 0 3 chr2 31210889 31211187 -219476667 - AluSq SINE Alu -16 297 1 420 289 68 78 chr2 31211202 31211613 -219476241 + MLT1J LTR MaLR 105 511 0 21 0 0 0 chr2 31211622 31211643 -219476211 + AT_rich Low_complexity Low_complexity 1 21 0 395 260 10 10 chr2 31213561 31213665 -219474189 - MIR SINE MIR -109 153 50 182 213 0 21 chr2 31213851 31213898 -219473956 + MIR SINE MIR 118 163 -99 380 293 156 6 chr2 31214460 31214627 -219473227 - MIR SINE MIR -50 212 21 9175 78 1 1 chr2 31214869 31216040 -219471814 + L1P LINE L1 101 1271 -4875 34135 38 4 0 chr2 31216140 31220496 -219467358 - L1P2 LINE L1 -530 5625 1258 555 312 30 5 chr2 31221726 31221925 -219465929 - MIR SINE MIR 0 262 59 235 219 31 16 chr2 31222261 31222325 -219465529 - L2 LINE L2 -8 3305 3241 406 236 203 7 chr2 31222459 31222607 -219465247 + MIR SINE MIR 10 186 -76 515 71 0 14 chr2 31222712 31222818 -219465036 + L1PA4 LINE L1 6063 6167 0 485 262 48 14 chr2 31223883 31224028 -219463826 - MER5A DNA MER1_type -1 188 39 354 283 113 31 chr2 31224279 31224319 -219463535 + MER5B DNA MER1_type 7 42 -136 192 40 0 0 chr2 31224319 31224344 -219463510 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1699 25 10 0 chr2 31224345 31224545 -219463309 - L1PA4 LINE L1 -14 6141 5940 354 283 113 31 chr2 31224545 31224661 -219463193 + MER5B DNA MER1_type 41 178 0 1077 229 51 42 chr2 31224959 31225295 -219462559 - LTR16A LTR ERVL -6 444 106 221 346 10 0 chr2 31225549 31225650 -219462204 + MIR SINE MIR 51 152 -110 400 247 155 32 chr2 31226142 31226361 -219461493 + L1ME4a LINE L1 5848 6093 -28 2313 85 3 7 chr2 31227104 31227398 -219460456 - AluSg SINE Alu -17 293 1 1464 191 140 51 chr2 31227521 31227950 -219459904 + MLT1C LTR MaLR 1 467 0 2350 95 3 0 chr2 31228272 31228578 -219459276 + AluSc SINE Alu 1 307 -2 601 140 0 30 chr2 31229340 31229478 -219458376 + L1M LINE L1 5274 5402 -778 2373 129 63 3 chr2 31229478 31229858 -219457996 + MER57A LTR ERV1 1 403 0 3382 118 67 28 chr2 31229858 31230398 -219457456 + MER57A-int LTR ERV1 1 561 -6976 416 274 109 71 chr2 31230498 31230764 -219457090 - L3 LINE CR1 -694 883 608 332 236 22 22 chr2 31230998 31231087 -219456767 - L1MC4 LINE L1 -1339 6703 6615 321 311 0 0 chr2 31231012 31231102 -219456752 + L1MC4 LINE L1 6614 6703 -1339 * 1405 267 39 5 chr2 31231491 31232103 -219455751 + L1ME LINE L1 5167 5801 -361 596 197 84 0 chr2 31232186 31232209 -219455645 - L1MA10 LINE L1 -1 6333 6311 6285 222 85 23 chr2 31232209 31235193 -219452661 - L1ME1 LINE L1 -23 6143 2815 267 272 228 0 chr2 31235383 31235497 -219452357 - MIR SINE MIR 0 262 123 291 228 18 0 chr2 31235829 31235886 -219451968 - L2 LINE L2 -7 3306 3249 610 148 99 68 chr2 31236167 31236329 -219451525 + MLT1B LTR MaLR 7 173 -217 573 145 92 72 chr2 31236321 31236427 -219451427 + MLT1B LTR MaLR 301 412 -55 * 998 31 78 8 chr2 31236427 31236555 -219451299 - MER85 DNA T2_type 0 139 3 573 145 92 72 chr2 31236555 31236600 -219451254 + MLT1B LTR MaLR 412 455 -12 493 314 0 19 chr2 31237467 31237623 -219450231 - MIR SINE MIR -2 260 108 489 125 12 12 chr2 31238242 31238322 -219449532 + MER116 DNA Mariner 1 80 0 317 344 121 9 chr2 31238889 31239113 -219448741 - MIR SINE MIR -8 254 6 205 228 238 10 chr2 31240264 31240365 -219447489 + MIR SINE MIR 23 146 -116 243 206 16 32 chr2 31240968 31241031 -219446823 - MIR SINE MIR -1 261 200 211 306 85 0 chr2 31242008 31242099 -219445755 - MIR SINE MIR -60 148 53 755 289 74 8 chr2 31242415 31242657 -219445197 - MIR SINE MIR 0 262 5 340 289 88 18 chr2 31242818 31242932 -219444922 + MIR SINE MIR 141 262 0 2224 107 3 0 chr2 31243130 31243430 -219444424 - AluSx SINE Alu -11 301 1 206 214 57 29 chr2 31243761 31243831 -219444023 + CT-rich Low_complexity Low_complexity 4 75 0 400 325 8 0 chr2 31244161 31244278 -219443576 - MIR SINE MIR -14 248 131 1240 150 14 10 chr2 31244278 31244485 -219443369 + MER3 DNA MER1_type 1 208 -1 273 89 44 0 chr2 31245371 31245416 -219442438 - MLT2B1 LTR ERVL 0 520 474 1165 209 27 51 chr2 31245508 31245964 -219441890 - MLT2B1 LTR ERVL -32 488 1 232 271 176 12 chr2 31246070 31246155 -219441699 + MIR SINE MIR 17 115 -147 208 317 84 56 chr2 31246159 31246301 -219441553 + MER5B DNA MER1_type 4 149 -29 229 248 60 53 chr2 31246796 31246929 -219440925 - L1 LINE L1 -2196 3950 3817 410 289 112 67 chr2 31247106 31247480 -219440374 - L1 LINE L1 -2465 3681 3291 499 27 0 95 chr2 31247535 31247609 -219440245 - MADE1 DNA Mariner 0 80 14 254 259 37 0 chr2 31247856 31247910 -219439944 - MIR SINE MIR -7 255 200 355 245 27 58 chr2 31248039 31248194 -219439660 - MIR SINE MIR -65 143 40 377 272 53 18 chr2 31250108 31250222 -219437632 - MIR3 SINE MIR -53 155 38 1704 100 77 4 chr2 31250927 31251187 -219436667 + AluSx SINE Alu 1 279 -33 962 304 59 23 chr2 31251792 31252483 -219435371 - L1M4 LINE L1 -1353 4793 4078 1618 306 116 62 chr2 31252529 31253991 -219433863 - L1M4 LINE L1 -2385 3761 2221 428 302 103 53 chr2 31254098 31254317 -219433537 - HAL1 LINE L1 -860 1647 1440 2156 88 3 26 chr2 31254317 31254622 -219433232 + AluSc SINE Alu 1 298 -11 428 302 103 53 chr2 31254622 31254819 -219433035 - HAL1 LINE L1 -1067 1440 1210 258 139 0 0 chr2 31254824 31254860 -219432994 - MER5A DNA MER1_type -139 50 15 269 250 119 12 chr2 31255452 31255536 -219432318 - L2 LINE L2 -31 3282 3190 470 241 44 29 chr2 31255560 31255697 -219432157 - MIR SINE MIR -70 192 54 227 311 0 29 chr2 31256464 31256567 -219431287 + L2 LINE L2 2922 3021 -251 214 320 113 0 chr2 31256684 31256781 -219431073 - MIR SINE MIR -83 125 18 252 267 35 76 chr2 31257384 31257556 -219430298 - L2 LINE L2 -144 3128 2964 353 194 0 16 chr2 31257797 31257859 -219429995 - L2 LINE L2 -5 3308 3248 288 77 0 0 chr2 31258513 31258552 -219429302 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 184 247 117 52 chr2 31259360 31259437 -219428417 - L2 LINE L2 -40 3232 3151 516 236 24 16 chr2 31259961 31260084 -219427770 - MIR3 SINE MIR 0 208 85 217 241 57 82 chr2 31261560 31261718 -219426136 - MIR3 SINE MIR -15 193 40 230 224 57 85 chr2 31262568 31262676 -219425178 - MIR SINE MIR -105 103 8 244 316 58 36 chr2 31263212 31263351 -219424503 - MIR SINE MIR -52 210 69 718 252 89 65 chr2 31264490 31264896 -219422958 - MLT1J LTR MaLR -2 444 19 229 322 83 33 chr2 31264976 31265097 -219422757 - MIR SINE MIR -56 152 26 308 273 23 11 chr2 31265527 31265615 -219422239 + MER117 DNA MER1_type 109 197 0 322 225 45 11 chr2 31266063 31266152 -219421702 - MER103 DNA DNA -11 155 64 1537 67 5 19 chr2 31266919 31267129 -219420725 + AluY SINE Alu 83 289 -22 294 248 73 37 chr2 31267461 31267570 -219420284 + MIR SINE MIR 19 131 -131 734 194 9 4 chr2 31267957 31268193 -219419661 + GA-rich Low_complexity Low_complexity 1 237 0 333 130 0 0 chr2 31268362 31268408 -219419446 - Alu SINE Alu -257 46 1 456 208 94 44 chr2 31268962 31269121 -219418733 + L1ME3A LINE L1 5968 6134 -36 265 287 45 32 chr2 31269269 31269426 -219418428 + L2 LINE L2 3122 3280 -33 245 293 24 0 chr2 31269452 31269534 -219418320 + GA-rich Low_complexity Low_complexity 2 85 0 261 304 10 10 chr2 31270715 31270817 -219417037 - Charlie7 DNA MER1_type -3 2609 2508 307 282 107 0 chr2 31270933 31271036 -219416818 - MIR SINE MIR -62 146 33 216 317 30 30 chr2 31272068 31272169 -219415685 - MER5A DNA MER1_type -2 187 87 273 267 178 0 chr2 31272373 31272463 -219415391 + L2 LINE L2 3208 3313 0 243 61 0 0 chr2 31272897 31272930 -219414924 + (TTG)n Simple_repeat Simple_repeat 2 34 0 271 245 75 43 chr2 31273044 31273138 -219414716 - MIR SINE MIR -110 152 56 1586 118 9 129 chr2 31273250 31273582 -219414272 + AluJb SINE Alu 1 292 -20 695 261 16 16 chr2 31273647 31273831 -219414023 + MIR SINE MIR 79 262 0 1976 110 0 7 chr2 31274841 31275123 -219412731 + AluSx SINE Alu 15 294 -18 330 26 0 0 chr2 31276841 31276880 -219410974 + (CA)n Simple_repeat Simple_repeat 2 40 0 200 268 36 36 chr2 31277556 31277668 -219410186 + (TCTCTG)n Simple_repeat Simple_repeat 3 114 0 2127 97 30 0 chr2 31277698 31277996 -219409858 - AluSg SINE Alu -1 309 3 321 287 78 8 chr2 31278692 31278821 -219409033 - MIR3 SINE MIR -7 201 64 2228 71 0 3 chr2 31279140 31279540 -219408314 - AluY SINE Alu 0 399 1 243 267 22 0 chr2 31280118 31280253 -219407601 + CT-rich Low_complexity Low_complexity 1 138 0 968 156 0 36 chr2 31281095 31281262 -219406592 - MER3 DNA MER1_type -27 182 22 530 261 86 60 chr2 31281741 31281975 -219405879 - MIR SINE MIR -21 241 2 221 375 29 10 chr2 31282258 31282362 -219405492 - MER91A DNA MER1_type -2 194 89 215 286 89 27 chr2 31282865 31282977 -219404877 + L2 LINE L2 3185 3303 -10 324 293 17 35 chr2 31282999 31283115 -219404739 + MIR SINE MIR 124 237 -25 21 0 0 0 chr2 31283315 31283336 -219404518 + AT_rich Low_complexity Low_complexity 1 21 0 231 88 0 0 chr2 31283599 31283633 -219404221 + (TA)n Simple_repeat Simple_repeat 1 34 0 564 203 68 8 chr2 31283633 31283742 -219404112 - FLAM_C SINE Alu -183 119 1 26 0 0 0 chr2 31284235 31284261 -219403593 + AT_rich Low_complexity Low_complexity 1 26 0 1783 82 4 0 chr2 31284285 31284516 -219403338 - AluSx SINE Alu -80 232 1 2240 74 7 3 chr2 31285154 31285452 -219402402 - AluSc SINE Alu -9 300 2 23 0 0 0 chr2 31285490 31285513 -219402341 + AT_rich Low_complexity Low_complexity 1 23 0 387 255 150 13 chr2 31286036 31286189 -219401665 + MIR SINE MIR 59 232 -30 461 301 26 13 chr2 31287462 31287618 -219400236 + MLT1L LTR MaLR 144 301 -314 1575 193 50 34 chr2 31288509 31288892 -219398962 + MLT1B LTR MaLR 1 389 -1 308 302 70 8 chr2 31289126 31289255 -219398599 - L1ME LINE L1 -502 5619 5483 2405 87 0 0 chr2 31289283 31289582 -219398272 - AluSq SINE Alu -14 299 1 622 294 128 64 chr2 31289760 31290911 -219396943 - L1ME LINE L1 -768 5378 4155 23 0 0 0 chr2 31291929 31291952 -219395902 + AT_rich Low_complexity Low_complexity 1 23 0 636 286 117 40 chr2 31291969 31292364 -219395490 + L1ME LINE L1 2877 3301 -2845 263 213 16 0 chr2 31292383 31292444 -219395410 + L1MD2 LINE L1 6096 6157 -202 205 194 0 0 chr2 31292765 31292801 -219395053 - MIR SINE MIR -13 249 214 * 263 259 69 35 chr2 31292795 31292911 -219394943 - L2 LINE L2 -2 3270 3151 222 217 301 12 chr2 31292933 31293016 -219394838 - MIR SINE MIR -31 177 71 188 245 75 19 chr2 31293070 31293123 -219394731 + MIR SINE MIR 6 61 -201 16336 127 101 8 chr2 31293433 31295503 -219392351 - L1PBa LINE L1 -2818 4044 2168 2415 82 0 3 chr2 31295503 31295809 -219392045 + AluY SINE Alu 1 305 -6 16336 127 101 8 chr2 31295809 31297431 -219390423 - L1PBa LINE L1 -4694 2168 3 743 173 6 39 chr2 31297438 31297594 -219390260 - MLT1A1 LTR MaLR -214 151 1 457 232 94 29 chr2 31297736 31297874 -219389980 + MLT1C LTR MaLR 6 152 -315 805 264 63 17 chr2 31297900 31298139 -219389715 + MLT1C LTR MaLR 218 467 0 394 259 75 34 chr2 31298448 31298595 -219389259 - MER5A DNA MER1_type 0 189 37 195 354 20 40 chr2 31298681 31298780 -219389074 + MIR SINE MIR 14 110 -152 28 0 0 0 chr2 31298831 31298859 -219388995 + AT_rich Low_complexity Low_complexity 1 28 0 2196 194 95 27 chr2 31299911 31300136 -219387718 + L1ME LINE L1 4120 4328 -1818 1302 84 68 0 chr2 31300136 31300326 -219387528 - L1PA14 LINE L1 -1 6160 5958 2196 194 95 27 chr2 31300326 31300775 -219387079 + L1ME LINE L1 4328 4840 -1306 * 3107 228 75 18 chr2 31300774 31301822 -219386032 + L1ME1 LINE L1 5055 6162 -4 3671 265 155 22 chr2 31303298 31304416 -219383438 + L2 LINE L2 1217 2601 -713 8187 55 1 0 chr2 31304416 31305381 -219382473 + LTR5 LTR ERVK 1 966 -3 3671 265 155 22 chr2 31305381 31305816 -219382038 + L2 LINE L2 2601 2977 -337 197 339 24 94 chr2 31308945 31309072 -219378782 - L2 LINE L2 -44 3228 3111 302 299 187 23 chr2 31309317 31309531 -219378323 + L1ME LINE L1 4809 5057 -1089 496 345 20 12 chr2 31309841 31310031 -219377823 + L1ME LINE L1 5452 5639 -523 6297 113 123 18 chr2 31310031 31310540 -219377314 - Tigger3b DNA MER2_type -1797 1231 777 1858 107 76 0 chr2 31310540 31310802 -219377052 - AluSx SINE Alu -15 297 16 6297 113 123 18 chr2 31310802 31310955 -219376899 - Tigger3b DNA MER2_type -2251 777 641 369 0 0 0 chr2 31310955 31310996 -219376858 + (CA)n Simple_repeat Simple_repeat 2 42 0 6297 113 123 18 chr2 31310996 31311446 -219376408 - Tigger3b DNA MER2_type -2387 641 1 496 345 20 12 chr2 31311446 31311501 -219376353 + L1ME LINE L1 5639 5699 -463 1450 64 0 6 chr2 31311506 31311679 -219376175 + AluY SINE Alu 1 172 -139 6121 114 10 2 chr2 31311679 31312801 -219375053 - L1PA8A LINE L1 -562 5569 4442 1439 122 0 80 chr2 31312801 31313064 -219374790 + MER1B DNA MER1_type 98 339 0 217 195 0 0 chr2 31313833 31313874 -219373980 - L3 LINE CR1 -23 1554 1514 322 302 47 59 chr2 31313908 31314077 -219373777 - L3 LINE CR1 -156 1421 1255 667 37 0 0 chr2 31314158 31314240 -219373614 - AluSc SINE Alu -7 302 221 1005 179 115 8 chr2 31314240 31314474 -219373380 + MER58B DNA MER1_type 77 335 -6 262 259 0 0 chr2 31314501 31314559 -219373295 - L3 LINE CR1 -326 1251 1194 2085 242 122 28 chr2 31314757 31315533 -219372321 - HAL1 LINE L1 -302 2205 1357 361 333 94 28 chr2 31315697 31315910 -219371944 - MIR SINE MIR -25 237 11 216 130 0 0 chr2 31316934 31316980 -219370874 + (TA)n Simple_repeat Simple_repeat 1 46 0 2562 229 27 13 chr2 31317585 31318261 -219369593 + L1PA10 LINE L1 1180 1864 -4282 1878 144 14 22 chr2 31318272 31318632 -219369222 - L1P LINE L1 -2963 3183 2827 20604 125 23 12 chr2 31318646 31319554 -219368300 + L1PA10 LINE L1 1875 2771 -3397 2200 112 6 6 chr2 31319554 31319866 -219367988 + AluSx SINE Alu 1 312 0 20604 125 23 12 chr2 31319866 31323191 -219364663 + L1PA10 LINE L1 2771 6157 -11 1011 129 0 0 chr2 31324895 31325035 -219362819 - AluJb SINE Alu -13 299 160 1384 156 8 0 chr2 31325192 31325436 -219362418 + L1MA4 LINE L1 4559 4804 -1342 3084 148 56 21 chr2 31325436 31326041 -219361813 + L1MA4 LINE L1 5663 6291 -9 1305 154 5 19 chr2 31326341 31326555 -219361299 - AluJb SINE Alu -20 292 82 402 321 153 0 chr2 31326729 31326860 -219360994 - L2 LINE L2 0 3272 3122 297 317 97 41 chr2 31327077 31327222 -219360632 + L2 LINE L2 3114 3266 -6 245 259 139 28 chr2 31327471 31327579 -219360275 - MIR SINE MIR -13 249 130 209 33 33 0 chr2 31328286 31328316 -219359538 + (TA)n Simple_repeat Simple_repeat 2 32 0 2153 104 3 44 chr2 31329935 31330251 -219357603 + AluSp SINE Alu 1 303 -10 225 377 0 0 chr2 31331587 31331656 -219356198 - L3b LINE CR1 -3 1580 1512 210 356 100 21 chr2 31331670 31331951 -219355903 - L2 LINE L2 -1298 2016 1714 1215 204 106 73 chr2 31332243 31332572 -219355282 + MLT1C LTR MaLR 59 405 -62 2064 65 52 14 chr2 31332572 31332863 -219354991 - AluY SINE Alu -9 302 1 1215 204 106 73 chr2 31332863 31332929 -219354925 + MLT1C LTR MaLR 405 467 0 189 0 0 0 chr2 31333865 31333886 -219353968 + (T)n Simple_repeat Simple_repeat 1 21 0 1577 114 21 0 chr2 31334691 31334928 -219352926 + L1PA8A LINE L1 5886 6127 -4 205 216 0 39 chr2 31336611 31336662 -219351192 + G-rich Low_complexity Low_complexity 2 50 0 189 200 0 44 chr2 31336708 31336753 -219351101 - L2 LINE L2 -94 3219 3177 3485 146 30 6 chr2 31336788 31337412 -219350442 - L1MA5 LINE L1 -3 6297 5659 183 318 191 21 chr2 31338114 31338444 -219349410 + L2 LINE L2 1565 1950 -1364 184 75 25 50 chr2 31339796 31339836 -219348018 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr2 31341024 31341047 -219346807 + (GAA)n Simple_repeat Simple_repeat 2 24 0 449 337 72 47 chr2 31391456 31391735 -219296119 + L2 LINE L2 2926 3211 -61 2047 203 52 29 chr2 31391842 31392364 -219295490 + MLT1F LTR MaLR 1 534 -8 185 298 99 8 chr2 31393118 31393239 -219294615 - L2 LINE L2 -196 3076 2945 * 217 267 14 144 chr2 31393226 31393372 -219294482 + MIR SINE MIR 17 139 -69 287 255 92 64 chr2 31393504 31393645 -219294209 + MIR SINE MIR 92 236 -26 422 284 154 6 chr2 31393831 31393993 -219293861 + MIR SINE MIR 20 205 -57 297 297 101 29 chr2 31394433 31394571 -219293283 - MIR3 SINE MIR -56 152 5 482 259 192 5 chr2 31395999 31396192 -219291662 - MIR SINE MIR -6 256 28 558 318 106 61 chr2 31398003 31398446 -219289408 + L2 LINE L2 2809 3271 -1 1257 206 38 3 chr2 31398900 31399213 -219288641 + MER33 DNA MER1_type 1 316 -8 345 100 0 0 chr2 31400147 31400197 -219287657 + (TG)n Simple_repeat Simple_repeat 1 50 0 221 348 281 0 chr2 31400368 31400546 -219287308 - MIR SINE MIR 0 262 35 2255 117 0 3 chr2 31400639 31400946 -219286908 - AluSx SINE Alu -6 306 1 246 317 132 30 chr2 31401923 31402090 -219285764 + MIR SINE MIR 69 252 -10 208 246 77 31 chr2 31402281 31402346 -219285508 - L2 LINE L2 -4 3309 3242 563 269 129 0 chr2 31403997 31404168 -219283686 - MIR SINE MIR -5 257 65 186 243 0 0 chr2 31404236 31404273 -219283581 + MIR SINE MIR 113 149 -113 1639 119 70 0 chr2 31404355 31404599 -219283255 + AluSq SINE Alu 1 261 -52 306 282 0 24 chr2 31405334 31405419 -219282435 - MIR3 SINE MIR -22 186 104 1672 275 121 15 chr2 31405647 31406377 -219281477 + L1ME3A LINE L1 5359 6165 -5 366 80 0 0 chr2 31407334 31407384 -219280470 + (CA)n Simple_repeat Simple_repeat 2 51 0 308 365 9 0 chr2 31407453 31407560 -219280294 + MIR SINE MIR 28 135 -73 237 304 99 67 chr2 31408098 31408381 -219279473 + L2 LINE L2 2816 3107 -165 316 322 144 0 chr2 31408568 31408686 -219279168 + L2 LINE L2 3133 3267 -5 282 116 0 0 chr2 31408687 31408730 -219279124 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 462 88 0 0 chr2 31410151 31410219 -219277635 - MADE1 DNA Mariner -12 68 1 276 292 45 0 chr2 31410592 31410681 -219277173 - MIR3 SINE MIR -34 174 82 257 106 0 21 chr2 31411255 31411302 -219276552 + (TCC)n Simple_repeat Simple_repeat 3 48 0 903 177 5 91 chr2 31412262 31412460 -219275394 - MER5A DNA MER1_type -2 187 7 580 189 0 0 chr2 31412477 31412579 -219275275 + MER5A DNA MER1_type 4 105 -84 208 310 0 14 chr2 31412695 31412766 -219275088 - MER5B DNA MER1_type -102 76 7 343 289 0 22 chr2 31413119 31413209 -219274645 + L1MC4 LINE L1 6614 6701 -1341 200 158 18 0 chr2 31413213 31413270 -219274584 + (TA)n Simple_repeat Simple_repeat 2 59 0 646 262 34 48 chr2 31413273 31413479 -219274375 - MIR SINE MIR -58 204 2 888 177 52 10 chr2 31413619 31413811 -219274043 + MER20 DNA MER1_type 20 219 0 291 309 12 0 chr2 31415161 31415242 -219272612 - MIR3 SINE MIR -6 202 121 832 311 26 0 chr2 31416752 31416980 -219270874 - MIR SINE MIR -8 254 21 297 318 40 32 chr2 31417274 31417400 -219270454 - MIR3 SINE MIR -46 162 36 191 339 97 24 chr2 31418513 31418637 -219269217 - L2 LINE L2 -213 3059 2927 246 135 0 0 chr2 31418647 31418684 -219269170 - MLT2D LTR ERVL 0 414 378 423 0 0 0 chr2 31418686 31418733 -219269121 + (TG)n Simple_repeat Simple_repeat 2 48 0 1735 133 10 24 chr2 31418762 31419055 -219268799 + MER7A DNA MER2_type 14 300 -46 1829 153 17 24 chr2 31419055 31419349 -219268505 - AluJo SINE Alu -18 294 3 1216 183 256 38 chr2 31419376 31419770 -219268084 - MLT2B1 LTR ERVL -40 480 1 22 0 0 0 chr2 31420520 31420542 -219267312 + AT_rich Low_complexity Low_complexity 1 22 0 261 290 35 10 chr2 31420608 31420705 -219267149 - MIR SINE MIR -55 153 51 1671 106 166 15 chr2 31421246 31421577 -219266277 - L1MA7 LINE L1 0 6291 5911 550 149 116 0 chr2 31421559 31421680 -219266174 + L1MA7 LINE L1 5783 5917 -374 * 495 253 71 76 chr2 31422163 31422361 -219265493 - MIR SINE MIR -57 205 9 546 335 73 17 chr2 31422713 31423000 -219264854 - L3 LINE CR1 -53 1524 1222 190 279 0 0 chr2 31423249 31423292 -219264562 - MIR SINE MIR -2 260 218 1765 199 43 53 chr2 31423954 31423991 -219263863 - MLT2D LTR ERVL 0 414 378 351 0 0 0 chr2 31423991 31424030 -219263824 + (TG)n Simple_repeat Simple_repeat 2 40 0 1765 199 43 53 chr2 31424030 31424410 -219263444 - MLT2D LTR ERVL -36 378 1 418 209 55 27 chr2 31424467 31424577 -219263277 - MIR SINE MIR -74 188 76 596 253 58 67 chr2 31425055 31425367 -219262487 + L1MEd LINE L1 560 868 -5251 260 128 0 0 chr2 31425356 31425403 -219262451 + L1PB4 LINE L1 6108 6154 -2 * 311 303 50 76 chr2 31425561 31425702 -219262152 - MIR SINE MIR -50 212 76 2171 122 0 3 chr2 31425702 31425997 -219261857 + AluSx SINE Alu 1 294 -18 311 303 50 76 chr2 31425997 31426053 -219261801 - MIR SINE MIR -186 76 20 690 276 62 0 chr2 31429906 31430116 -219257738 - MIR SINE MIR -6 256 34 1740 162 3 40 chr2 31431656 31431952 -219255902 - AluJo SINE Alu -27 285 1 232 67 0 44 chr2 31432622 31432667 -219255187 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1341 288 105 65 chr2 31432824 31433537 -219254317 + L2 LINE L2 1942 2625 -689 2130 134 0 7 chr2 31433537 31433843 -219254011 - AluSx SINE Alu -8 304 1 1341 288 105 65 chr2 31433843 31433873 -219253981 + L2 LINE L2 2625 2652 -662 2260 79 11 0 chr2 31433873 31434002 -219253852 + AluY SINE Alu 1 127 -184 180 0 0 0 chr2 31434002 31434022 -219253832 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2260 79 11 0 chr2 31434022 31434172 -219253682 + AluY SINE Alu 127 283 -28 1341 288 105 65 chr2 31434172 31434417 -219253437 + L2 LINE L2 2652 2971 -343 337 262 76 69 chr2 31434619 31434853 -219253001 + MIR SINE MIR 16 248 -14 250 276 67 48 chr2 31434911 31435016 -219252838 + MIR SINE MIR 45 151 -57 218 183 0 141 chr2 31435748 31435819 -219252035 + L2 LINE L2 2757 2817 -497 203 263 17 17 chr2 31436280 31436398 -219251456 + A-rich Low_complexity Low_complexity 1 118 0 286 200 0 0 chr2 31436620 31436675 -219251179 + MIR SINE MIR 51 105 -103 1326 268 46 21 chr2 31436702 31437221 -219250633 + HAL1b LINE L1 86 617 -731 541 239 86 0 chr2 31437319 31437482 -219250372 + HAL1b LINE L1 625 801 -547 696 243 74 5 chr2 31437580 31437769 -219250085 + MIR SINE MIR 47 248 -14 551 203 62 23 chr2 31438192 31438320 -219249534 + MIR3 SINE MIR 39 171 -37 2326 110 0 7 chr2 31438563 31438872 -219248982 + AluSq SINE Alu 1 307 -6 1726 218 62 12 chr2 31439020 31439443 -219248411 + L1MC4a LINE L1 7141 7584 -224 1594 162 82 75 chr2 31439617 31439993 -219247861 - MLT1B LTR MaLR -11 379 1 539 243 320 23 chr2 31440073 31440423 -219247431 + LTR16A1 LTR ERVL 4 457 0 238 258 48 0 chr2 31440431 31440493 -219247361 + MIR SINE MIR 197 261 -1 244 271 201 22 chr2 31440494 31440685 -219247169 - MIR SINE MIR -25 237 4 22 0 0 0 chr2 31440989 31441011 -219246843 + AT_rich Low_complexity Low_complexity 1 22 0 1856 144 98 14 chr2 31441836 31442182 -219245672 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr2 31442207 31442230 -219245624 + AT_rich Low_complexity Low_complexity 1 23 0 251 286 0 14 chr2 31442563 31442633 -219245221 - MIR SINE MIR -36 226 158 408 272 62 43 chr2 31443263 31443425 -219244429 + MIR SINE MIR 48 212 -50 951 198 5 77 chr2 31444812 31444847 -219243007 + MER58A DNA MER1_type 19 55 -2365 2170 118 0 3 chr2 31444847 31445161 -219242693 - AluSq SINE Alu 0 313 1 951 198 5 77 chr2 31445161 31445347 -219242507 + MER58A DNA MER1_type 55 224 0 348 328 12 57 chr2 31445351 31445529 -219242325 + MIR SINE MIR 16 187 -58 306 0 0 0 chr2 31446704 31446738 -219241116 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 2298 261 184 17 chr2 31446873 31448090 -219239764 + L2 LINE L2 1549 2968 -346 585 267 118 15 chr2 31448152 31448347 -219239507 + L2 LINE L2 3095 3309 -4 320 333 65 8 chr2 31448460 31448583 -219239271 + MIR3 SINE MIR 1 130 -78 524 313 101 10 chr2 31448679 31448877 -219238977 - MIR SINE MIR -40 222 7 1486 182 50 87 chr2 31449252 31449653 -219238201 - MLT2C1 LTR ERVL -11 386 1 414 273 129 0 chr2 31450192 31450331 -219237523 + MIR3 SINE MIR 50 206 -2 1850 136 51 0 chr2 31450705 31451000 -219236854 + AluSq SINE Alu 1 310 -3 288 0 0 0 chr2 31451442 31451474 -219236380 + (TG)n Simple_repeat Simple_repeat 1 32 0 348 321 66 29 chr2 31452645 31452782 -219235072 + MIR3 SINE MIR 17 158 -50 257 323 106 50 chr2 31453049 31453210 -219234644 + MLT1J LTR MaLR 106 275 -236 236 281 146 22 chr2 31454224 31454313 -219233541 - MLT2E LTR ERVL -485 143 44 392 300 57 7 chr2 31457311 31457451 -219230403 + L2 LINE L2 2219 2365 -949 319 281 86 50 chr2 31457533 31457672 -219230182 - MIR SINE MIR -71 191 48 290 319 52 84 chr2 31457639 31457984 -219229870 + L2 LINE L2 2441 2774 -540 * 5987 218 79 40 chr2 31458087 31459048 -219228806 - L1M4 LINE L1 -2945 3699 2777 2783 102 37 5 chr2 31459048 31459109 -219228745 + L1PA13 LINE L1 5714 5772 -391 276 30 0 0 chr2 31459109 31459142 -219228712 + (TG)n Simple_repeat Simple_repeat 2 34 0 492 86 0 0 chr2 31459144 31459214 -219228640 + (CA)n Simple_repeat Simple_repeat 2 71 0 2783 102 37 5 chr2 31459214 31459580 -219228274 + L1PA13 LINE L1 5772 6158 -5 5987 218 79 40 chr2 31459580 31461621 -219226233 - L1M4 LINE L1 -3867 2777 817 180 0 0 0 chr2 31461621 31461641 -219226213 + (TA)n Simple_repeat Simple_repeat 2 21 0 2183 114 3 0 chr2 31461641 31461948 -219225906 - AluSx SINE Alu -3 309 2 5987 218 79 40 chr2 31461948 31462303 -219225551 - L1M4 LINE L1 -5827 817 477 1911 132 10 3 chr2 31462303 31462599 -219225255 - AluSx SINE Alu -14 298 1 5987 218 79 40 chr2 31462599 31462755 -219225099 - L1M4 LINE L1 -6167 477 14 348 208 198 0 chr2 31462912 31463013 -219224841 - MIR SINE MIR -68 194 74 202 224 82 122 chr2 31463072 31463219 -219224635 - L3b LINE CR1 -147 1436 1296 199 320 70 31 chr2 31464888 31465016 -219222838 - L2 LINE L2 -191 3081 2949 2203 246 47 39 chr2 31466118 31466963 -219220891 + L2 LINE L2 2376 3235 -78 328 338 149 7 chr2 31467246 31467394 -219220460 - L2 LINE L2 -1 3271 3103 1604 168 34 24 chr2 31468194 31468486 -219219368 + AluJb SINE Alu 4 298 -14 2075 112 7 0 chr2 31469022 31469318 -219218536 - AluSx SINE Alu -14 298 1 554 271 115 28 chr2 31469561 31469779 -219218075 - MIR SINE MIR 0 262 26 2255 79 0 10 chr2 31469780 31470083 -219217771 - AluSg SINE Alu -10 300 1 273 384 13 38 chr2 31470436 31470595 -219217259 - MIR SINE MIR -57 205 51 398 290 105 25 chr2 31471222 31471384 -219216470 + MER5A DNA MER1_type 1 175 -14 1050 257 16 0 chr2 31474072 31474329 -219213525 + L1MD3 LINE L1 7729 7989 -6 2521 158 36 11 chr2 31474776 31475226 -219212628 + MLT2C2 LTR ERVL 3 463 -1 530 242 146 0 chr2 31476306 31476471 -219211383 + MER53 DNA DNA 1 189 0 433 215 62 31 chr2 31477559 31477689 -219210165 - L2 LINE L2 -1 3271 3138 377 296 262 4 chr2 31477862 31478129 -219209725 + L2 LINE L2 2978 3313 0 499 274 27 59 chr2 31479616 31479802 -219208052 - MER5A DNA MER1_type -3 186 7 938 222 90 15 chr2 31480128 31480394 -219207460 - Charlie4a DNA MER1_type 0 508 223 3021 110 16 9 chr2 31480395 31480848 -219207006 + L1PA16 LINE L1 5702 6157 -9 392 264 0 11 chr2 31480856 31480947 -219206907 + L1MC4 LINE L1 6614 6703 -1339 227 246 18 0 chr2 31480965 31481022 -219206832 + (TA)n Simple_repeat Simple_repeat 1 58 0 656 254 142 44 chr2 31481288 31481761 -219206093 + LTR33 LTR ERVL 3 521 0 363 297 39 39 chr2 31481766 31481921 -219205933 + MIR SINE MIR 74 228 -34 828 138 90 7 chr2 31482969 31483114 -219204740 + MLT1A1 LTR MaLR 3 159 -206 1029 150 6 0 chr2 31483114 31483281 -219204573 + FRAM SINE Alu 1 167 -9 1137 182 57 0 chr2 31483285 31483494 -219204360 + MLT1A1 LTR MaLR 145 365 0 225 382 21 7 chr2 31483612 31483756 -219204098 - MIR SINE MIR -75 187 42 280 319 112 61 chr2 31484681 31485336 -219202518 + L2 LINE L2 2288 2975 -339 7313 97 6 1 chr2 31485606 31487431 -219200423 - L1PA8 LINE L1 -5 6167 4336 21 0 0 0 chr2 31488730 31488751 -219199103 + AT_rich Low_complexity Low_complexity 1 21 0 366 288 73 57 chr2 31488883 31489060 -219198794 + MIR SINE MIR 49 228 -34 210 200 29 100 chr2 31489342 31489412 -219198442 + MIR3 SINE MIR 4 68 -140 368 292 69 15 chr2 31489484 31489614 -219198240 + MIR SINE MIR 1 137 -125 22 0 0 0 chr2 31489960 31489982 -219197872 + GC_rich Low_complexity Low_complexity 1 22 0 275 291 201 8 chr2 31491292 31491426 -219196428 - MIR SINE MIR -64 198 39 2070 121 0 63 chr2 31491760 31492091 -219195763 + AluSx SINE Alu 1 310 -2 2215 172 24 26 chr2 31492287 31492740 -219195114 + L1MB8 LINE L1 5727 6178 0 589 293 13 46 chr2 31492933 31493172 -219194682 - MIR SINE MIR -16 246 16 1980 115 3 23 chr2 31494507 31494812 -219193042 + L1PB1 LINE L1 5851 6149 -2 599 219 129 0 chr2 31495340 31495495 -219192359 - MER45A DNA AcHobo 0 178 4 495 48 0 0 chr2 31495819 31495881 -219191973 + (CA)n Simple_repeat Simple_repeat 1 62 0 310 345 7 14 chr2 31495911 31496056 -219191798 + CT-rich Low_complexity Low_complexity 1 144 0 203 301 14 14 chr2 31496146 31496219 -219191635 - L3 LINE CR1 -21 1556 1484 519 294 54 20 chr2 31496645 31496849 -219191005 + MIR SINE MIR 48 258 -4 553 291 236 11 chr2 31496866 31497441 -219190413 - L2 LINE L2 -13 3300 2589 301 267 147 0 chr2 31497761 31497877 -219189977 + MIR SINE MIR 20 152 -110 1281 211 120 88 chr2 31497974 31498439 -219189415 - MLT1H LTR MaLR -48 501 22 2558 142 26 21 chr2 31498499 31498923 -219188931 + MSTB LTR MaLR 1 426 0 254 297 119 0 chr2 31499469 31499570 -219188284 + L2 LINE L2 3160 3272 0 181 240 106 39 chr2 31499635 31499739 -219188115 + L3 LINE CR1 1162 1272 -305 334 277 32 13 chr2 31499791 31499930 -219187924 - MIR SINE MIR -75 133 44 186 43 0 0 chr2 31500163 31500186 -219187668 + (TA)n Simple_repeat Simple_repeat 2 24 0 365 301 89 0 chr2 31500312 31500435 -219187419 + MER94 DNA DNA 1 134 0 308 230 88 47 chr2 31500641 31500789 -219187065 - MIR SINE MIR -37 225 72 2655 161 20 13 chr2 31502828 31503282 -219184572 + LTR32 LTR ERVL 15 471 0 693 181 99 0 chr2 31503817 31503988 -219183866 - MER53 DNA DNA -1 188 1 222 235 163 51 chr2 31504164 31504262 -219183592 + MIR3 SINE MIR 5 113 -95 2382 110 0 0 chr2 31506293 31506602 -219181252 + AluSc SINE Alu 1 309 0 373 274 29 0 chr2 31506638 31506740 -219181114 + MER81 DNA DNA 1 105 -9 208 250 36 18 chr2 31507589 31507645 -219180209 + MIR SINE MIR 19 75 -133 210 130 43 22 chr2 31507746 31507792 -219180062 - MIR SINE MIR -109 153 107 298 251 126 60 chr2 31508180 31508297 -219179557 + MIR SINE MIR 65 198 -64 2268 104 0 10 chr2 31508297 31508595 -219179259 + AluSx SINE Alu 1 295 -17 298 251 126 60 chr2 31508595 31508644 -219179210 + MIR SINE MIR 198 242 -20 2346 116 14 11 chr2 31509330 31509693 -219178161 - THE1B LTR MaLR 0 364 1 274 219 0 4 chr2 31510011 31510080 -219177774 + MIR SINE MIR 84 132 -76 181 359 31 0 chr2 31510370 31510434 -219177420 + L3b LINE CR1 1508 1573 -10 * 412 266 77 73 chr2 31510433 31510760 -219177094 - L2 LINE L2 -79 3234 2907 346 266 72 113 chr2 31510782 31511325 -219176529 - L2 LINE L2 -905 2409 1900 2080 169 3 14 chr2 31511325 31511692 -219176162 + MLT1A1 LTR MaLR 1 363 -2 346 266 72 113 chr2 31511692 31511855 -219175999 - L2 LINE L2 -1414 1900 1732 238 188 59 79 chr2 31512118 31512219 -219175635 + MLT1E LTR MaLR 477 575 -18 417 325 53 29 chr2 31512248 31512624 -219175230 - L2 LINE L2 -1580 1734 1350 2253 98 34 0 chr2 31514037 31514333 -219173521 - AluSq SINE Alu -3 310 5 200 281 62 0 chr2 31514376 31514440 -219173414 + MIR SINE MIR 124 191 -71 1729 197 21 3 chr2 31514690 31515025 -219172829 + MER58B DNA MER1_type 1 341 0 1250 199 9 5 chr2 31515106 31515322 -219172532 - MLT1A1 LTR MaLR 0 365 149 2009 152 38 34 chr2 31515322 31515820 -219172034 + MLT2A2 LTR ERVL 1 514 -40 180 0 0 0 chr2 31515820 31515840 -219172014 + (TA)n Simple_repeat Simple_repeat 2 21 0 2009 152 38 34 chr2 31515840 31515882 -219171972 + MLT2A2 LTR ERVL 514 554 0 785 180 27 0 chr2 31515882 31516031 -219171823 - MLT1A1 LTR MaLR -212 153 1 336 301 260 0 chr2 31516129 31516302 -219171552 + L3 LINE CR1 1247 1464 -113 617 75 0 0 chr2 31516386 31516466 -219171388 + MADE1 DNA Mariner 1 80 0 1364 139 109 130 chr2 31517550 31518010 -219169844 + LTR7 LTR ERV1 1 450 0 212 287 62 16 chr2 31518347 31518476 -219169378 + MIR3 SINE MIR 24 158 -50 210 238 88 25 chr2 31519305 31519385 -219168469 + MIR SINE MIR 75 159 -103 1979 181 47 66 chr2 31519385 31519900 -219167954 - MLT1D LTR MaLR 0 505 1 184 309 106 21 chr2 31519938 31520032 -219167822 + MIR3 SINE MIR 71 172 -36 197 83 28 0 chr2 31520348 31520384 -219167470 + (CCA)n Simple_repeat Simple_repeat 1 37 0 285 265 141 16 chr2 31520962 31521147 -219166707 - L2 LINE L2 0 3313 3106 284 286 125 24 chr2 31521390 31521558 -219166296 + MIR3 SINE MIR 20 204 -4 2416 145 23 51 chr2 31522175 31522609 -219165245 - Tigger2a DNA MER2_type 0 434 13 602 312 112 27 chr2 31522700 31523709 -219164145 - L1MC/D LINE L1 -743 5403 4309 1131 187 35 0 chr2 31523709 31523912 -219163942 + MER6B DNA MER2_type 1 210 0 602 312 112 27 chr2 31523912 31524226 -219163628 - L1MC/D LINE L1 -1837 4309 4023 2206 160 14 0 chr2 31524284 31524640 -219163214 - MER47A DNA MER2_type 0 366 6 404 284 173 11 chr2 31524687 31524958 -219162896 - L1P LINE L1 -2192 3954 3640 1082 299 114 51 chr2 31524994 31525297 -219162557 - L1MC/D LINE L1 -2616 3530 3247 2538 98 21 24 chr2 31525297 31525673 -219162181 + THE1C LTR MaLR 1 375 0 1082 299 114 51 chr2 31525673 31526672 -219161182 - L1MC/D LINE L1 -2899 3247 2147 1273 260 115 37 chr2 31527183 31527729 -219160125 - HAL1b LINE L1 -415 933 345 4036 259 105 39 chr2 31527770 31529021 -219158833 - L1MC4 LINE L1 -2 8040 6674 2101 125 3 0 chr2 31529021 31529308 -219158546 + AluSx SINE Alu 23 310 -2 4036 259 105 39 chr2 31529308 31529538 -219158316 - L1MC4 LINE L1 -1368 6674 6461 243 262 131 0 chr2 31529833 31529955 -219157899 - HAL1b LINE L1 -1125 223 86 491 240 175 7 chr2 31530491 31530645 -219157209 + L1ME3A LINE L1 5988 6167 -3 258 339 78 17 chr2 31532422 31532602 -219155252 + MIR3 SINE MIR 11 201 -7 194 373 0 0 chr2 31534908 31534967 -219152887 + L2 LINE L2 3206 3264 -8 4040 99 45 2 chr2 31537213 31537769 -219150085 + LTR19B LTR ERV1 1 580 0 250 281 117 61 chr2 31538100 31538510 -219149344 + HAL1 LINE L1 1109 1541 -966 1904 149 0 19 chr2 31538520 31538828 -219149026 + AluJo SINE Alu 1 302 -10 1214 171 151 16 chr2 31539331 31539583 -219148271 + AluJo SINE Alu 2 287 -25 307 303 121 29 chr2 31539789 31540070 -219147784 + L1MEc LINE L1 2168 2474 -3922 351 337 71 51 chr2 31540112 31540318 -219147536 + L1MEc LINE L1 2538 2738 -3477 2123 110 27 7 chr2 31540318 31540618 -219147236 + AluSp SINE Alu 1 306 -7 351 337 71 51 chr2 31540618 31540986 -219146868 + L1MEc LINE L1 2738 3119 -3096 412 324 134 3 chr2 31541005 31541295 -219146559 + L1MEc LINE L1 3207 3534 -2681 524 249 137 46 chr2 31541384 31541669 -219146185 - MLT1J1 LTR MaLR -120 326 16 328 296 128 14 chr2 31541730 31542075 -219145779 + L1MEc LINE L1 3595 3978 -2237 300 328 127 32 chr2 31542091 31542399 -219145455 + L1MEc LINE L1 4016 4352 -1863 1108 290 84 46 chr2 31542408 31543430 -219144424 + L1MEc LINE L1 4836 5399 -816 2846 7 0 0 chr2 31543430 31543735 -219144119 + AluY SINE Alu 1 305 -6 1108 290 84 46 chr2 31543735 31543811 -219144043 + L1MEc LINE L1 5399 5471 -744 2199 107 3 0 chr2 31544121 31544411 -219143443 - AluSx SINE Alu -21 291 1 409 244 199 6 chr2 31546059 31546215 -219141639 - MER5A DNA MER1_type 0 189 4 1246 177 38 56 chr2 31546331 31546455 -219141399 - MER58B DNA MER1_type -2113 307 182 2472 66 0 3 chr2 31546455 31546757 -219141097 + AluY SINE Alu 1 301 -10 1246 177 38 56 chr2 31546757 31546898 -219140956 - MER58B DNA MER1_type -2238 182 47 213 294 81 23 chr2 31548004 31548101 -219139753 + MIR SINE MIR 50 150 -61 628 137 0 0 chr2 31548167 31548262 -219139592 - AluSg/x SINE Alu -3 309 215 228 276 17 0 chr2 31548341 31548399 -219139455 + MIR SINE MIR 156 214 -48 333 317 83 46 chr2 31549896 31550136 -219137718 + MIR SINE MIR 8 256 -6 949 203 102 4 chr2 31550599 31550835 -219137019 - L1ME3A LINE L1 0 6170 5912 1385 194 52 26 chr2 31550836 31551145 -219136709 + MER58B DNA MER1_type 17 333 -8 533 205 25 16 chr2 31551174 31551296 -219136558 - L1ME3A LINE L1 -497 5673 5551 23 33 0 0 chr2 31552507 31552537 -219135317 + AT_rich Low_complexity Low_complexity 1 30 0 341 312 16 32 chr2 31552737 31552862 -219134992 + MIR SINE MIR 70 192 -70 582 118 0 0 chr2 31554290 31554383 -219133471 + (TG)n Simple_repeat Simple_repeat 2 94 0 189 0 0 0 chr2 31555842 31555863 -219131991 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 3822 142 36 69 chr2 31556126 31556840 -219131014 + LTR8 LTR ERV1 1 691 0 239 355 50 14 chr2 31558384 31558525 -219129329 - MIR SINE MIR -114 148 3 267 79 0 0 chr2 31559526 31559564 -219128290 + (GA)n Simple_repeat Simple_repeat 1 38 0 249 279 72 27 chr2 31559566 31559677 -219128177 + MIR SINE MIR 16 131 -77 180 356 0 61 chr2 31560079 31560194 -219127660 - L2 LINE L2 -231 3041 2934 420 225 108 36 chr2 31560205 31560316 -219127538 - L2 LINE L2 -16 3256 3138 207 339 172 42 chr2 31560366 31561370 -219126484 - L2 LINE L2 -423 2891 1757 466 368 73 42 chr2 31561403 31561854 -219126000 - L2 LINE L2 0 3272 2808 656 284 177 36 chr2 31562175 31562734 -219125120 + L1MB7 LINE L1 3145 3782 -2364 3991 206 66 15 chr2 31562736 31564483 -219123371 + L1MB7 LINE L1 4334 6168 -16 657 279 110 62 chr2 31564575 31565264 -219122590 + L1ME4a LINE L1 5255 5964 -157 232 285 98 65 chr2 31565311 31565434 -219122420 - L2 LINE L2 -613 2701 2575 310 265 0 12 chr2 31566120 31566203 -219121651 - MIR SINE MIR -94 168 87 202 346 64 0 chr2 31566337 31566415 -219121439 - L2 LINE L2 -1 3271 3189 220 286 78 0 chr2 31566425 31566502 -219121352 - L2 LINE L2 -53 3219 3137 1015 188 12 0 chr2 31566565 31566735 -219121119 - AluJo SINE Alu -19 293 122 1547 111 9 9 chr2 31566785 31567011 -219120843 + MSTA LTR MaLR 1 226 -202 9220 165 16 3 chr2 31567011 31568538 -219119316 + L1MA3 LINE L1 1181 2727 -4838 741 82 0 0 chr2 31568540 31568638 -219119216 + L1PA5 LINE L1 1 98 -6048 * 16069 61 5 2 chr2 31568636 31570703 -219117151 + L1PA5 LINE L1 847 2918 -3228 1677 52 9 5 chr2 31570703 31570909 -219116945 + L1PA4 LINE L1 5943 6154 -1 * 21245 39 3 1 chr2 31570898 31574115 -219113739 + L1PA5 LINE L1 2913 6139 -15 14125 152 22 27 chr2 31574143 31576927 -219110927 + L1MA3 LINE L1 4004 6777 -947 2174 116 0 26 chr2 31576927 31577237 -219110617 - AluSx SINE Alu -7 305 4 14125 152 22 27 chr2 31577237 31578181 -219109673 + L1MA3 LINE L1 6777 7724 0 2091 136 3 0 chr2 31578280 31578574 -219109280 - AluSx SINE Alu -17 295 1 2513 46 0 26 chr2 31578580 31578884 -219108970 - AluY SINE Alu -15 296 1 352 234 200 88 chr2 31580002 31580481 -219107373 - MLT1H LTR MaLR -16 533 1 23 0 0 0 chr2 31581104 31581127 -219106727 + AT_rich Low_complexity Low_complexity 1 23 0 559 251 152 0 chr2 31581281 31581452 -219106402 + MIR SINE MIR 25 221 -41 207 0 0 0 chr2 31582220 31582243 -219105611 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1506 203 0 31 chr2 31582245 31582535 -219105319 - AluJb SINE Alu -31 281 1 2282 84 3 14 chr2 31583532 31583828 -219104026 + AluSq SINE Alu 1 293 -20 183 237 0 0 chr2 31583894 31583932 -219103922 + MIR SINE MIR 107 144 -64 191 279 98 49 chr2 31584010 31584132 -219103722 + MIR SINE MIR 125 252 -10 187 304 0 0 chr2 31584150 31584206 -219103648 + MIR3 SINE MIR 151 206 -2 657 242 0 0 chr2 31584755 31584887 -219102967 - MER3 DNA MER1_type -77 132 1 218 264 100 45 chr2 31585005 31585115 -219102739 + MIR SINE MIR 26 141 -67 251 241 79 44 chr2 31585996 31586117 -219101737 + MIR SINE MIR 22 144 -64 312 291 133 33 chr2 31586403 31586554 -219101300 - L3 LINE CR1 -5 1572 1407 505 204 19 0 chr2 31586730 31586838 -219101016 + MER117 DNA MER1_type 36 145 -52 350 301 59 36 chr2 31586956 31587175 -219100679 + MLT1K LTR MaLR 7 230 -358 480 282 98 39 chr2 31587289 31587523 -219100331 + MLT1L LTR MaLR 345 592 -23 270 311 149 6 chr2 31587537 31587698 -219100156 - L3 LINE CR1 -263 1314 1131 372 141 0 6 chr2 31588316 31588383 -219099471 + AluSq SINE Alu 1 55 -246 2881 3 0 6 chr2 31588383 31588696 -219099158 + AluYa5 SINE Alu 1 311 0 1814 132 8 0 chr2 31588696 31588961 -219098893 + AluSq SINE Alu 44 311 -2 463 101 25 0 chr2 31588961 31589040 -219098814 + GA-rich Low_complexity Low_complexity 1 81 0 4293 148 30 26 chr2 31589238 31590001 -219097853 - L1MB4 LINE L1 0 6180 5415 269 302 168 13 chr2 31590245 31590394 -219097460 + MIR SINE MIR 84 255 -7 466 323 18 6 chr2 31590793 31590960 -219096894 - MIR SINE MIR -61 201 33 186 299 15 15 chr2 31591694 31591761 -219096093 + MIR SINE MIR 68 134 -128 2432 160 38 7 chr2 31591926 31592345 -219095509 + MSTB1 LTR MaLR 1 432 0 376 258 57 16 chr2 31592466 31592590 -219095264 + MIR SINE MIR 20 148 -114 995 251 184 0 chr2 31592606 31593013 -219094841 + L2 LINE L2 2608 3072 -241 930 160 105 6 chr2 31593014 31593195 -219094659 + AluJo SINE Alu 1 199 -113 371 261 115 0 chr2 31593213 31593343 -219094511 - L1ME LINE L1 -375 5680 5536 1852 221 70 10 chr2 31593624 31594237 -219093617 - L1ME LINE L1 -2099 3981 3299 * 4184 116 4 4 chr2 31594208 31595263 -219092591 - L1P4 LINE L1 -397 5705 4653 * 10151 127 6 0 chr2 31595259 31596814 -219091040 + L1P LINE L1 2988 4552 -1594 2013 264 51 43 chr2 31596812 31598431 -219089423 - L1ME LINE L1 -4471 1609 20 * 308 323 219 0 chr2 31598903 31599095 -219088759 + MIR SINE MIR 20 253 -9 184 288 85 0 chr2 31601265 31601324 -219086530 + L2 LINE L2 3204 3267 -5 678 360 96 36 chr2 31601723 31602463 -219085391 + L2 LINE L2 1881 2664 -650 457 245 38 38 chr2 31602801 31602960 -219084894 - L1MC5 LINE L1 -47 7914 7756 209 267 0 0 chr2 31603827 31603872 -219083982 + G-rich Low_complexity Low_complexity 2 46 0 401 267 120 27 chr2 31604029 31604179 -219083675 + MER69A DNA AcHobo 1 164 -13 212 296 0 14 chr2 31604206 31604277 -219083577 + CT-rich Low_complexity Low_complexity 3 72 0 4217 166 63 24 chr2 31606631 31607796 -219080058 - L1MB5 LINE L1 -1 6173 4960 598 265 47 31 chr2 31608174 31608431 -219079423 + MIR SINE MIR 2 262 0 194 250 210 89 chr2 31609435 31609559 -219078295 - MIR SINE MIR -70 192 54 389 328 53 10 chr2 31610222 31610425 -219077429 + MIR SINE MIR 38 247 -15 232 277 0 46 chr2 31611076 31611141 -219076713 + MER5A DNA MER1_type 26 87 -102 * 311 206 0 41 chr2 31611088 31611161 -219076693 - MER5A DNA MER1_type -24 165 96 453 325 31 37 chr2 31611818 31612141 -219075713 + HAL1 LINE L1 606 926 -1581 266 284 35 28 chr2 31612247 31612388 -219075466 + HAL1 LINE L1 1405 1546 -961 1769 205 96 17 chr2 31612394 31612813 -219075041 + LTR40b LTR ERVL 11 462 0 1119 274 114 33 chr2 31612814 31613610 -219074244 + HAL1 LINE L1 1543 2403 -104 338 297 69 47 chr2 31613964 31614196 -219073658 + MIR SINE MIR 20 256 -6 240 277 0 0 chr2 31615757 31615804 -219072050 + L2 LINE L2 3215 3261 -11 481 322 60 6 chr2 31615876 31616059 -219071795 + MIR SINE MIR 60 252 -10 595 291 50 59 chr2 31616263 31616524 -219071330 + MIR SINE MIR 7 257 -5 1666 162 84 29 chr2 31617880 31618226 -219069628 + MLT1A1 LTR MaLR 1 365 0 536 314 28 8 chr2 31618305 31618557 -219069297 - MIR SINE MIR -4 258 2 214 253 67 40 chr2 31620415 31620490 -219067364 - L2 LINE L2 -2 3311 3235 370 284 53 49 chr2 31620929 31621154 -219066700 + L1MEd LINE L1 502 727 -5392 321 265 20 10 chr2 31621317 31621419 -219066435 + (CATATA)n Simple_repeat Simple_repeat 3 105 0 197 206 0 32 chr2 31621433 31621496 -219066358 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 336 285 32 49 chr2 31621500 31621623 -219066231 + L1MC4 LINE L1 6588 6708 -1334 1521 251 165 35 chr2 31623181 31623702 -219064152 + MLT1E LTR MaLR 1 589 -4 181 291 36 0 chr2 31623973 31624028 -219063826 + MER5A DNA MER1_type 69 125 -64 43598 34 22 1 chr2 31624095 31630120 -219057734 + L1PA2 LINE L1 2 6155 0 437 284 81 7 chr2 31630131 31630279 -219057575 - MIR3 SINE MIR -48 160 2 414 308 24 1 chr2 31631507 31631651 -219056203 - MIR SINE MIR -56 152 36 381 228 67 34 chr2 31633660 31633809 -219054045 + L1MC5 LINE L1 7772 7925 -36 189 0 0 0 chr2 31633954 31633975 -219053879 + (CTG)n Simple_repeat Simple_repeat 2 22 0 842 229 84 0 chr2 31633975 31634154 -219053700 - MIR SINE MIR 0 262 69 710 281 94 0 chr2 31634572 31634764 -219053090 - MER115 DNA AcHobo -333 360 151 5318 62 8 5 chr2 31635643 31636307 -219051547 + PABL_B LTR ERV1 1 666 -1 2244 113 0 0 chr2 31636693 31637002 -219050852 + AluSg SINE Alu 1 309 -1 784 228 31 5 chr2 31637112 31637305 -219050549 + MER20 DNA MER1_type 21 218 -1 311 281 211 4 chr2 31637533 31637704 -219050150 - MIR SINE MIR -35 227 13 603 310 90 0 chr2 31638159 31638359 -219049495 + MIR SINE MIR 28 245 -17 272 213 33 49 chr2 31638520 31638703 -219049151 + (CAGG)n Simple_repeat Simple_repeat 1 180 0 226 313 49 6 chr2 31638644 31638807 -219049047 + (GGGTG)n Simple_repeat Simple_repeat 1 170 0 * 223 267 85 115 chr2 31640053 31640218 -219047636 + MIR SINE MIR 20 179 -83 318 87 0 0 chr2 31640527 31640573 -219047281 + (CA)n Simple_repeat Simple_repeat 2 47 0 823 198 35 70 chr2 31641636 31641863 -219045991 + MER20 DNA MER1_type 1 219 0 211 343 79 30 chr2 31642321 31642586 -219045268 + L2 LINE L2 2807 3084 -188 2388 87 0 3 chr2 31642953 31643251 -219044603 - AluSq SINE Alu -7 306 10 304 261 29 0 chr2 31645169 31645238 -219042616 - L2 LINE L2 0 3313 3243 298 353 78 12 chr2 31645600 31645844 -219042010 - L2 LINE L2 -498 2816 2557 185 346 12 0 chr2 31646019 31646100 -219041754 + L2 LINE L2 3189 3270 -43 801 332 89 9 chr2 31646167 31646625 -219041229 - L2 LINE L2 -810 2504 2010 216 260 73 0 chr2 31646900 31646996 -219040858 - L2 LINE L2 -1604 1710 1608 571 246 11 29 chr2 31647026 31647201 -219040653 + MER5B DNA MER1_type 3 174 -4 269 266 23 11 chr2 31647216 31647357 -219040497 + MER5A DNA MER1_type 4 189 0 354 279 91 36 chr2 31648312 31648477 -219039377 + MIR SINE MIR 32 205 -57 32 0 0 0 chr2 31648488 31648520 -219039334 + AT_rich Low_complexity Low_complexity 1 32 0 2361 87 0 0 chr2 31648524 31648811 -219039043 - AluSg SINE Alu -23 287 1 1991 122 36 41 chr2 31649605 31649967 -219037887 - MER46B DNA MER2_type 0 236 2 193 208 94 0 chr2 31652235 31652288 -219035566 + MIR SINE MIR 118 175 -87 432 313 85 11 chr2 31652382 31652558 -219035296 + L3 LINE CR1 1207 1395 -182 721 244 41 0 chr2 31652997 31653169 -219034685 - MER97a DNA MER1_type? -715 179 1 203 346 56 0 chr2 31653666 31653773 -219034081 + MIR SINE MIR 77 189 -73 187 227 91 45 chr2 31657157 31657223 -219030631 - MIR SINE MIR -50 212 144 1976 197 87 20 chr2 31657256 31657748 -219030106 - MLT1E2 LTR MaLR -99 527 3 279 264 110 0 chr2 31657758 31657849 -219030005 - MIR SINE MIR -116 146 46 257 50 0 25 chr2 31658186 31658226 -219029628 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 0 0 0 chr2 31658256 31658282 -219029572 + (CA)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr2 31658281 31658305 -219029549 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 395 363 77 37 chr2 31660241 31660514 -219027340 + L3 LINE CR1 1238 1521 -56 470 244 17 8 chr2 31661139 31661258 -219026596 - L2 LINE L2 -5 3308 3189 1824 154 46 44 chr2 31662712 31663101 -219024753 + MLT1B LTR MaLR 1 390 0 209 238 48 67 chr2 31663274 31663379 -219024475 - MIR SINE MIR -88 120 18 300 326 86 23 chr2 31665799 31665974 -219021880 + MIR3 SINE MIR 20 205 -3 2979 99 0 14 chr2 31666149 31666583 -219021271 + MSTA LTR MaLR 1 428 0 373 326 182 24 chr2 31666684 31667267 -219020587 + L2 LINE L2 2185 2859 -455 2576 172 65 19 chr2 31668183 31668705 -219019149 + MER77 LTR ERV1 54 599 -6 181 293 147 0 chr2 31669626 31669701 -219018153 - L2 LINE L2 -10 3262 3177 288 286 44 30 chr2 31669821 31669976 -219017878 + MIR3 SINE MIR 7 146 -62 2239 180 19 90 chr2 31670891 31671525 -219016329 + L1MB5 LINE L1 5572 6160 -14 235 177 32 0 chr2 31671526 31671588 -219016266 + (CA)n Simple_repeat Simple_repeat 2 65 0 492 215 96 60 chr2 31672004 31672172 -219015682 + L1ME4a LINE L1 5851 6032 -89 4245 12 0 0 chr2 31672172 31672670 -219015184 + L1PA2 LINE L1 5658 6155 0 492 215 96 60 chr2 31672670 31672752 -219015102 + L1ME4a LINE L1 6032 6110 -11 2340 109 0 6 chr2 31673193 31673504 -219014350 - AluSc SINE Alu 0 309 1 720 151 0 0 chr2 31674247 31674366 -219013488 - AluSp/q SINE Alu -3 310 192 22 35 0 0 chr2 31674914 31674943 -219012911 + AT_rich Low_complexity Low_complexity 1 29 0 227 286 143 0 chr2 31675313 31675390 -219012464 + MIR SINE MIR 59 146 -116 23 0 0 0 chr2 31676227 31676250 -219011604 + AT_rich Low_complexity Low_complexity 1 23 0 971 101 0 20 chr2 31676251 31676400 -219011454 - L1MA2 LINE L1 -1 6303 6158 2121 138 7 0 chr2 31676403 31676700 -219011154 - AluSx SINE Alu -10 302 4 833 211 94 19 chr2 31677090 31677303 -219010551 - MIR SINE MIR -32 230 2 209 342 159 14 chr2 31678528 31678823 -219009031 + L2 LINE L2 2394 2731 -583 187 300 33 56 chr2 31679040 31679130 -219008724 + L2 LINE L2 3009 3096 -176 192 312 43 21 chr2 31679227 31679320 -219008534 + L2 LINE L2 3210 3304 -9 * 236 250 0 0 chr2 31679295 31679343 -219008511 - L2 LINE L2 -4 3309 3262 537 295 31 26 chr2 31679385 31679578 -219008276 + MIR SINE MIR 69 262 0 207 272 6 139 chr2 31680993 31681166 -219006688 + MIR SINE MIR 63 212 -50 305 254 18 79 chr2 31681265 31681379 -219006475 + MIR SINE MIR 30 136 -126 187 218 0 55 chr2 31681391 31681446 -219006408 + L2 LINE L2 3219 3270 -2 849 211 0 57 chr2 31681477 31681577 -219006277 + MER5A DNA MER1_type 7 92 -97 2207 112 0 35 chr2 31681577 31681889 -219005965 - AluSq SINE Alu -12 301 1 849 211 0 57 chr2 31681889 31681982 -219005872 + MER5A DNA MER1_type 92 189 0 739 263 69 5 chr2 31682046 31682263 -219005591 - MIR SINE MIR -24 238 8 357 214 20 31 chr2 31683586 31683684 -219004170 - MIR SINE MIR -146 116 20 456 274 82 0 chr2 31683709 31683844 -219004010 - MIR SINE MIR -14 248 103 292 298 50 16 chr2 31685071 31685192 -219002662 + MIR SINE MIR 20 144 -118 497 253 106 0 chr2 31685826 31685996 -219001858 + MIR SINE MIR 50 237 -25 282 234 97 14 chr2 31687981 31688120 -218999734 + MIR SINE MIR 18 166 -57 5520 68 12 0 chr2 31688400 31689138 -218998716 + L1PA6 LINE L1 5332 6078 -76 553 299 92 0 chr2 31689698 31689882 -218997972 - MIR SINE MIR -10 252 52 2042 292 63 30 chr2 31689909 31690401 -218997453 + L1MEc LINE L1 37 511 -5885 2105 153 0 0 chr2 31690401 31690708 -218997146 - AluSx SINE Alu -5 307 1 2042 292 63 30 chr2 31690708 31691188 -218996666 + L1MEc LINE L1 511 1041 -5355 22 0 0 0 chr2 31691491 31691513 -218996341 + AT_rich Low_complexity Low_complexity 1 22 0 390 357 13 6 chr2 31691716 31691873 -218995981 + MER5A DNA MER1_type 32 189 0 201 310 14 0 chr2 31692346 31692417 -218995437 + L2 LINE L2 3191 3262 -10 353 300 179 32 chr2 31692845 31693158 -218994696 + L2 LINE L2 2905 3263 -9 655 135 8 45 chr2 31693627 31693760 -218994094 + MER39B LTR ERV1 526 653 0 261 151 0 0 chr2 31694857 31694910 -218992944 + (CCG)n Simple_repeat Simple_repeat 1 53 0 623 222 18 23 chr2 31695649 31695820 -218992034 + MER58B DNA MER1_type 172 341 0 191 254 91 0 chr2 31697150 31697205 -218990649 - MIR3 SINE MIR -8 200 141 189 125 107 54 chr2 31697861 31697917 -218989937 + L2 LINE L2 2995 3053 -260 186 43 0 0 chr2 31698143 31698166 -218989688 + (A)n Simple_repeat Simple_repeat 1 23 0 757 213 53 32 chr2 31698167 31698438 -218989416 + L1MB7 LINE L1 5573 5854 -330 1738 201 76 18 chr2 31698872 31699337 -218988517 - MLT1D LTR MaLR 0 505 1 226 294 59 12 chr2 31699339 31699424 -218988430 - MIR SINE MIR -84 178 90 521 317 140 28 chr2 31699470 31699864 -218987990 - L2 LINE L2 -16 3297 2860 509 281 92 50 chr2 31699862 31700100 -218987754 + L2 LINE L2 3022 3269 -3 * 351 283 40 0 chr2 31701318 31701417 -218986437 + MIR SINE MIR 30 132 -76 438 275 93 3 chr2 31701428 31701595 -218986259 + MIR SINE MIR 39 217 -45 501 260 122 83 chr2 31701886 31702401 -218985453 + LTR67 LTR ERVL 2 536 -21 2438 79 0 0 chr2 31702408 31702698 -218985156 - AluSg SINE Alu -20 290 1 266 200 0 0 chr2 31702729 31702779 -218985075 + MIR SINE MIR 96 145 -117 250 295 0 0 chr2 31703209 31703270 -218984584 + L2 LINE L2 3245 3305 -8 837 253 45 9 chr2 31703420 31703641 -218984213 - MIR SINE MIR 0 262 34 252 304 134 0 chr2 31704605 31704717 -218983137 + MIR3 SINE MIR 77 203 -5 1768 108 0 24 chr2 31705409 31705658 -218982196 + AluSg SINE Alu 1 243 -67 367 286 40 32 chr2 31707268 31707394 -218980460 + MIR SINE MIR 20 146 -116 23 0 0 0 chr2 31707592 31707615 -218980239 + GC_rich Low_complexity Low_complexity 1 23 0 1197 154 67 5 chr2 31709623 31709654 -218978200 + AluJo SINE Alu 87 115 -197 180 0 0 0 chr2 31709654 31709674 -218978180 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1197 154 67 5 chr2 31709674 31709850 -218978004 + AluJo SINE Alu 115 307 -5 2333 94 3 7 chr2 31711585 31711893 -218975961 + AluSq SINE Alu 7 313 0 502 259 15 0 chr2 31712284 31712415 -218975439 - MER94 DNA DNA -1 133 1 257 210 0 32 chr2 31712806 31712868 -218974986 - Charlie8 DNA MER1_type -1012 1405 1346 418 292 55 64 chr2 31712970 31713189 -218974665 - Charlie8 DNA MER1_type -2199 218 2 304 305 39 39 chr2 31713500 31713628 -218974226 - MIR3 SINE MIR -28 180 53 254 271 0 0 chr2 31715286 31715356 -218972498 + (TA)n Simple_repeat Simple_repeat 2 71 0 191 341 12 12 chr2 31715584 31715666 -218972188 + MER5B DNA MER1_type 1 82 -96 538 275 45 99 chr2 31716098 31716411 -218971443 - L1MC4 LINE L1 -2 8040 7745 357 335 41 41 chr2 31716772 31716966 -218970888 + MIR3 SINE MIR 10 203 -5 21 0 0 0 chr2 31717568 31717589 -218970265 + AT_rich Low_complexity Low_complexity 1 21 0 840 252 172 17 chr2 31718184 31718486 -218969368 + L2 LINE L2 2965 3313 0 258 32 0 0 chr2 31718486 31718517 -218969337 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 180 97 0 0 chr2 31718560 31718591 -218969263 + (A)n Simple_repeat Simple_repeat 1 31 0 2521 87 0 0 chr2 31720768 31721077 -218966777 - AluSp SINE Alu -4 309 1 385 262 40 24 chr2 31721718 31721844 -218966010 - L2 LINE L2 0 3313 3186 355 315 93 82 chr2 31722012 31722395 -218965459 - L2 LINE L2 -261 3052 2675 2463 68 3 0 chr2 31722395 31722689 -218965165 - AluY SINE Alu -16 295 1 355 315 93 82 chr2 31722689 31722859 -218964995 - L2 LINE L2 -638 2675 2508 249 284 39 63 chr2 31722968 31723095 -218964759 - L2 LINE L2 -222 3050 2927 404 356 17 17 chr2 31723340 31723517 -218964337 + MER5A DNA MER1_type 8 184 -5 1649 203 0 7 chr2 31723619 31723948 -218963906 - AluJo SINE Alu 0 327 1 230 301 41 0 chr2 31723957 31724030 -218963824 - MIR SINE MIR -108 154 79 270 303 0 87 chr2 31726700 31726813 -218961041 - MER5A DNA MER1_type -5 184 72 245 353 33 1 chr2 31728885 31728980 -218958874 + MIR SINE MIR 17 110 -102 939 203 45 31 chr2 31728980 31729317 -218958537 + Charlie1a DNA MER1_type 2 379 -1076 883 211 108 76 chr2 31729324 31729694 -218958160 + LTR41 LTR ERVL 381 762 -11 187 331 169 0 chr2 31730498 31730628 -218957226 + L2 LINE L2 2926 3077 -195 358 271 15 5 chr2 31730847 31730950 -218956904 - MIR SINE MIR -64 144 42 344 311 73 32 chr2 31732132 31732351 -218955503 - MIR SINE MIR 0 262 35 423 68 0 0 chr2 31732489 31732548 -218955306 + (CA)n Simple_repeat Simple_repeat 2 60 0 281 290 76 130 chr2 31736780 31737042 -218950812 + L2 LINE L2 2978 3225 -47 309 299 31 24 chr2 31737740 31737867 -218949987 - MIR SINE MIR -119 143 16 299 143 0 14 chr2 31738106 31738176 -218949678 + (TC)n Simple_repeat Simple_repeat 2 70 0 228 86 0 0 chr2 31739377 31739412 -218948442 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 297 240 223 23 chr2 31739616 31739791 -218948063 - MIR SINE MIR -6 256 47 260 258 22 45 chr2 31741651 31741740 -218946114 + MIR SINE MIR 65 151 -111 198 344 100 11 chr2 31742202 31742292 -218945562 + L2 LINE L2 3124 3221 -51 418 332 84 20 chr2 31742747 31742943 -218944911 - MIR SINE MIR -49 213 5 432 307 134 39 chr2 31743178 31743484 -218944370 + L2 LINE L2 2935 3269 -3 277 237 301 0 chr2 31744181 31744274 -218943580 - MIR SINE MIR -71 191 71 1089 173 112 9 chr2 31745848 31746062 -218941792 - MER46A DNA MER2_type 0 236 1 575 273 35 10 chr2 31747627 31747825 -218940029 - MIR3 SINE MIR -3 205 3 302 269 64 43 chr2 31748402 31748543 -218939311 + MLT1H LTR MaLR 125 268 -281 215 208 0 21 chr2 31748729 31748777 -218939077 + L2 LINE L2 3212 3258 -14 248 75 0 25 chr2 31748777 31748817 -218939037 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 183 246 215 0 chr2 31749833 31749898 -218937956 + MIR SINE MIR 114 192 -70 550 355 9 4 chr2 31751400 31751631 -218936223 - MIR SINE MIR -16 246 15 220 275 38 25 chr2 31752012 31752092 -218935762 - L3 LINE CR1 -1 1576 1496 947 67 20 13 chr2 31752098 31752248 -218935606 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 5139 30 0 3 chr2 31752250 31752845 -218935009 - L1PA3 LINE L1 0 6155 5563 12626 30 0 0 chr2 31752845 31754486 -218933368 + L1PA3 LINE L1 3920 5560 -595 312 222 0 0 chr2 31754487 31754559 -218933295 + CT-rich Low_complexity Low_complexity 1 72 0 401 216 123 53 chr2 31755287 31755458 -218932396 + MIR SINE MIR 80 262 0 435 209 24 46 chr2 31755845 31755976 -218931878 + MIR SINE MIR 18 161 -62 1256 195 105 76 chr2 31755982 31756429 -218931425 + MLT1C LTR MaLR 6 465 -2 725 91 0 10 chr2 31756434 31756533 -218931321 + MER4A LTR ERV1 1 98 -566 1996 111 11 25 chr2 31756533 31756883 -218930971 + MER4A LTR ERV1 261 664 0 331 263 21 0 chr2 31756883 31756978 -218930876 + MIR SINE MIR 157 253 -9 2249 112 0 3 chr2 31758403 31758707 -218929147 - AluSq SINE Alu -10 303 1 1448 192 46 23 chr2 31759069 31759460 -218928394 - MER54B LTR ERVL -5 788 487 297 191 16 0 chr2 31759472 31759535 -218928319 + MER4-int LTR ERV1 1099 1162 -5436 654 178 0 0 chr2 31759543 31759672 -218928182 + (TG)n Simple_repeat Simple_repeat 1 129 0 4702 180 31 15 chr2 31762698 31763546 -218924308 + MER21B LTR ERV1 1 861 -2 1138 99 0 0 chr2 31764424 31764575 -218923279 - AluSg/x SINE Alu -1 309 159 594 192 11 73 chr2 31764615 31764792 -218923062 + GSAT Satellite centromeric 3 168 -49 1298 92 0 12 chr2 31764793 31764957 -218922897 - AluSq SINE Alu -151 162 1 225 229 71 29 chr2 31765041 31765111 -218922743 + MLT1L LTR MaLR 1 73 -542 304 280 144 8 chr2 31765250 31765368 -218922486 - L2 LINE L2 -1 3271 3138 193 364 11 0 chr2 31765363 31765451 -218922403 - MIR SINE MIR -86 122 34 * 569 242 119 45 chr2 31765748 31765888 -218921966 - MER5C DNA MER1_type -2 322 194 1728 176 10 3 chr2 31765888 31766177 -218921677 + AluJb SINE Alu 1 291 -21 569 242 119 45 chr2 31766177 31766305 -218921549 - MER5C DNA MER1_type -130 194 34 1059 171 18 0 chr2 31767378 31767548 -218920306 - AluJo SINE Alu -20 292 120 640 232 11 76 chr2 31767980 31768165 -218919689 - MER63A DNA MER1_type -37 173 1 2369 55 0 17 chr2 31768394 31768724 -218919130 + AluY SINE Alu 1 325 0 342 230 0 23 chr2 31768846 31768933 -218918921 - L1ME4a LINE L1 -53 6068 5984 442 338 48 13 chr2 31769234 31769462 -218918392 + L1 LINE L1 3962 4197 -1949 328 344 28 36 chr2 31769486 31769733 -218918121 + L1 LINE L1 4153 4397 -1749 261 0 0 0 chr2 31769904 31769933 -218917921 + (CA)n Simple_repeat Simple_repeat 1 29 0 301 312 71 7 chr2 31769933 31770074 -218917780 + L1ME4a LINE L1 5972 6121 0 605 195 76 100 chr2 31770102 31770268 -218917586 + L1ME1 LINE L1 5955 6117 -49 2073 130 33 0 chr2 31770268 31770569 -218917285 + AluSx SINE Alu 1 311 -1 605 195 76 100 chr2 31770569 31770612 -218917242 + L1ME1 LINE L1 6117 6159 -7 276 167 61 30 chr2 31770929 31770995 -218916859 - L2 LINE L2 -1 3271 3204 226 270 32 0 chr2 31771706 31771769 -218916085 - MIR SINE MIR -108 154 90 3650 149 220 7 chr2 31771954 31772667 -218915187 - L1M1 LINE L1 -5287 2278 1414 1856 99 4 0 chr2 31772667 31772900 -218914954 - AluSc SINE Alu -75 234 1 758 70 130 17 chr2 31772901 31773016 -218914838 - AluSg SINE Alu -181 129 2 27 0 0 0 chr2 31774292 31774319 -218913535 + AT_rich Low_complexity Low_complexity 1 27 0 190 194 28 0 chr2 31774514 31774550 -218913304 - L2 LINE L2 -18 3254 3218 2205 130 0 3 chr2 31774686 31774993 -218912861 + AluSx SINE Alu 1 306 -6 2229 184 154 28 chr2 31774995 31775540 -218912314 + MER90 LTR ERV1 1 614 0 742 164 9 0 chr2 31775865 31775981 -218911873 + FLAM_C SINE Alu 2 118 -25 818 174 0 0 chr2 31776160 31776292 -218911562 + AluSq/x SINE Alu 1 132 -181 4943 139 46 27 chr2 31776861 31777150 -218910704 + MER4D LTR ERV1 2 284 -619 2435 81 0 3 chr2 31777150 31777459 -218910395 + AluY SINE Alu 1 308 -3 4943 139 46 27 chr2 31777459 31778053 -218909801 + MER4D LTR ERV1 284 902 -1 998 230 0 5 chr2 31778645 31778849 -218909005 + AluJo SINE Alu 84 286 -26 2257 110 0 7 chr2 31779125 31779424 -218908430 + AluSx SINE Alu 1 297 -15 2392 81 0 10 chr2 31779634 31779941 -218907913 + AluY SINE Alu 1 304 -7 2067 136 0 10 chr2 31780257 31780565 -218907289 - AluSx SINE Alu -7 305 1 1125 116 12 6 chr2 31780584 31780748 -218907106 - AluSq SINE Alu -15 298 134 2264 107 0 7 chr2 31780869 31781167 -218906687 + AluSx SINE Alu 1 296 -16 2710 45 0 0 chr2 31781216 31781526 -218906328 + AluY SINE Alu 2 311 0 256 188 0 0 chr2 31781684 31781732 -218906122 + FLAM_A SINE Alu 84 131 -2 527 171 29 48 chr2 31781732 31781837 -218906017 + AluJo/FRAM SINE Alu 189 291 -21 24 32 0 0 chr2 31781837 31781868 -218905986 + AT_rich Low_complexity Low_complexity 1 31 0 2296 112 0 0 chr2 31782131 31782435 -218905419 + AluSx SINE Alu 1 304 -8 2024 137 10 13 chr2 31782489 31782802 -218905052 - AluJo SINE Alu 0 312 1 2180 98 3 0 chr2 31782815 31783101 -218904753 - AluSg SINE Alu -20 290 4 806 173 0 23 chr2 31783107 31783240 -218904614 - FLAM_C SINE Alu -3 130 1 2234 103 7 3 chr2 31783450 31783752 -218904102 - AluSg SINE Alu -7 303 1 1504 270 57 29 chr2 31784041 31784575 -218903279 - MLT1H LTR MaLR 0 593 1 2101 127 0 13 chr2 31784693 31784993 -218902861 + AluSx SINE Alu 1 296 -16 1588 174 3 48 chr2 31785160 31785454 -218902400 - AluJb SINE Alu -31 281 1 633 186 110 0 chr2 31786097 31786215 -218901639 + FLAM_A SINE Alu 3 133 0 26 30 0 0 chr2 31786608 31786641 -218901213 + AT_rich Low_complexity Low_complexity 1 33 0 564 198 11 126 chr2 31787055 31787133 -218900721 - Charlie8 DNA MER1_type -2152 265 218 1874 164 7 3 chr2 31787133 31787431 -218900423 - AluJb SINE Alu -13 299 1 564 198 11 126 chr2 31787431 31787534 -218900320 - Charlie8 DNA MER1_type -2199 218 105 669 191 0 0 chr2 31787564 31787690 -218900164 - FRAM SINE Alu -10 166 41 1960 142 0 14 chr2 31787706 31787892 -218899962 - AluSx SINE Alu 0 319 137 2333 98 0 16 chr2 31787892 31788210 -218899644 - AluSq SINE Alu 0 313 1 1960 142 0 14 chr2 31788210 31788346 -218899508 - AluSx SINE Alu -182 137 1 965 196 0 6 chr2 31788354 31788559 -218899295 + AluSg/x SINE Alu 118 321 0 23 78 0 0 chr2 31788801 31788852 -218899002 + AT_rich Low_complexity Low_complexity 1 51 0 2474 73 3 0 chr2 31788884 31789184 -218898670 + AluSp SINE Alu 1 301 -12 1033 78 0 0 chr2 31789478 31789606 -218898248 + AluSc SINE Alu 168 295 -14 1610 180 0 48 chr2 31789609 31789904 -218897950 - AluJb SINE Alu -31 281 1 1829 182 132 25 chr2 31790067 31790139 -218897715 - MER68 LTR ERV1 -2 560 497 1642 128 0 0 chr2 31790139 31790365 -218897489 - AluSg/x SINE Alu -16 296 71 1829 182 132 25 chr2 31790365 31790693 -218897161 - MER68 LTR ERV1 -65 497 117 1724 172 0 0 chr2 31790699 31791011 -218896843 + AluJb SINE Alu 1 312 0 1920 101 4 8 chr2 31791060 31791318 -218896536 - AluSg SINE Alu -25 285 29 1145 54 0 0 chr2 31791338 31791468 -218896386 + AluYb8 SINE Alu 1 130 -188 2079 133 0 0 chr2 31791654 31791955 -218895899 - AluSx SINE Alu -11 301 1 1835 82 129 0 chr2 31792145 31792401 -218895453 - AluSc SINE Alu -20 289 1 1498 171 65 7 chr2 31792817 31793092 -218894762 - AluJb SINE Alu -21 291 1 1999 125 17 3 chr2 31793156 31793445 -218894409 - AluSx SINE Alu -19 293 1 2481 78 0 3 chr2 31793579 31793888 -218893966 + AluY SINE Alu 1 308 -3 1100 197 24 5 chr2 31794049 31794262 -218893592 - AluJo SINE Alu -10 302 86 22 56 0 0 chr2 31794421 31794457 -218893397 + AT_rich Low_complexity Low_complexity 1 36 0 443 194 163 10 chr2 31794459 31794557 -218893297 - AluY SINE Alu -198 113 1 * 693 147 199 0 chr2 31794557 31794692 -218893162 - AluJb SINE Alu -16 296 135 2166 84 3 78 chr2 31795042 31795176 -218892678 + AluSg SINE Alu 1 143 -167 2318 76 6 47 chr2 31795176 31795493 -218892361 + AluSc SINE Alu 2 305 -4 2166 84 3 78 chr2 31795493 31795679 -218892175 + AluSg SINE Alu 143 297 -13 2245 110 7 0 chr2 31797690 31797998 -218889856 + AluSx SINE Alu 2 311 -1 561 214 0 0 chr2 31798097 31798200 -218889654 + AluJb SINE Alu 180 282 -30 1790 79 162 26 chr2 31798237 31798502 -218889352 + AluSx SINE Alu 1 301 -1 337 253 24 0 chr2 31798543 31798626 -218889228 + MIR SINE MIR 38 122 -140 21 0 0 0 chr2 31798669 31798690 -218889164 + AT_rich Low_complexity Low_complexity 1 21 0 2292 93 17 0 chr2 31798785 31799076 -218888778 + AluSx SINE Alu 1 296 -16 1301 159 49 9 chr2 31799101 31799327 -218888527 + AluJb SINE Alu 60 294 -18 1221 257 110 39 chr2 31799336 31799751 -218888103 - L1MEc LINE L1 -4544 1852 1468 1490 77 0 10 chr2 31799751 31799946 -218887908 - AluY SINE Alu -13 298 106 2473 60 7 3 chr2 31799947 31800247 -218887607 - AluY SINE Alu -10 301 1 1221 257 110 39 chr2 31800247 31800346 -218887508 - L1MEc LINE L1 -4927 1469 1299 1560 167 35 7 chr2 31800370 31800652 -218887202 + AluJb SINE Alu 12 301 -11 2036 143 3 13 chr2 31800669 31800984 -218886870 - AluSx SINE Alu 0 312 1 2015 99 46 11 chr2 31801031 31801313 -218886541 - AluSc SINE Alu -16 293 2 1092 164 17 59 chr2 31801321 31801559 -218886295 - AluJo SINE Alu 0 312 85 469 70 0 0 chr2 31801559 31801616 -218886238 - AluSg/x SINE Alu -62 250 194 2139 121 13 0 chr2 31801620 31801918 -218885936 - AluSq SINE Alu -10 303 2 1117 253 57 64 chr2 31801920 31802003 -218885851 - L1MEc LINE L1 -5825 571 489 2719 143 34 2 chr2 31802003 31802416 -218885438 + MSTB LTR MaLR 1 426 0 1117 253 57 64 chr2 31802416 31802771 -218885083 - L1MEc LINE L1 -5907 489 136 2203 100 7 0 chr2 31802946 31803245 -218884609 - AluSp SINE Alu -12 301 1 2193 105 10 0 chr2 31803312 31803607 -218884247 - AluSx SINE Alu -14 298 1 23 42 0 21 chr2 31803607 31803633 -218884221 + AT_rich Low_complexity Low_complexity 1 27 -20 2233 101 0 0 chr2 31803633 31803920 -218883934 - AluSg SINE Alu -23 287 1 23 42 0 21 chr2 31803920 31803941 -218883913 + AT_rich Low_complexity Low_complexity 27 47 0 824 161 0 0 chr2 31803945 31804057 -218883797 - FLAM_C SINE Alu -30 113 2 974 183 0 27 chr2 31804697 31804715 -218883139 - AluSg/x SINE Alu 0 312 295 2384 101 0 0 chr2 31804715 31805023 -218882831 - AluSg SINE Alu -2 308 1 974 183 0 27 chr2 31805023 31805190 -218882664 - AluSg/x SINE Alu -17 295 132 2121 118 16 0 chr2 31805190 31805495 -218882359 - AluSg SINE Alu 0 310 1 1160 181 9 19 chr2 31805821 31805986 -218881868 - AluJb SINE Alu -14 298 134 2440 70 0 0 chr2 31805986 31806286 -218881568 - AluY SINE Alu -11 300 1 1160 181 9 19 chr2 31806286 31806336 -218881518 - AluJb SINE Alu -178 134 85 604 221 7 0 chr2 31806358 31806498 -218881356 + MER113 DNA MER1_type? 158 298 -223 22 0 0 0 chr2 31806548 31806570 -218881284 + AT_rich Low_complexity Low_complexity 1 22 0 2047 130 3 0 chr2 31807342 31807645 -218880209 - AluSx SINE Alu 0 304 1 1351 124 0 5 chr2 31807656 31807850 -218880004 - AluSg/x SINE Alu -15 295 103 1936 106 38 0 chr2 31807850 31808114 -218879740 - AluSc SINE Alu -35 274 1 1036 139 6 35 chr2 31808354 31808527 -218879327 + FRAM SINE Alu 1 167 -9 2462 65 0 13 chr2 31808707 31809014 -218878840 + AluY SINE Alu 1 303 -8 1139 139 0 0 chr2 31809022 31809187 -218878667 + AluJb SINE Alu 142 306 -6 21 36 0 0 chr2 31809219 31809247 -218878607 + AT_rich Low_complexity Low_complexity 1 28 0 745 177 0 82 chr2 31809247 31809394 -218878460 + AluJo SINE Alu 3 137 -175 36 23 0 0 chr2 31809394 31809437 -218878417 + AT_rich Low_complexity Low_complexity 1 43 0 279 295 116 0 chr2 31809495 31809590 -218878264 - MIR SINE MIR -151 111 6 517 245 36 0 chr2 31809682 31809821 -218878033 + L1ME3A LINE L1 5727 5870 -300 809 164 17 0 chr2 31809833 31809949 -218877905 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 31809954 31809987 -218877867 + AT_rich Low_complexity Low_complexity 1 33 0 2412 75 3 0 chr2 31810315 31810608 -218877246 - AluSp SINE Alu -19 294 1 1759 142 10 35 chr2 31810646 31810956 -218876898 - AluSx SINE Alu -10 302 1 970 117 0 7 chr2 31811101 31811238 -218876616 + AluJo SINE Alu 6 141 -171 1924 132 3 26 chr2 31811238 31811541 -218876313 + AluJb SINE Alu 5 300 -12 232 218 13 13 chr2 31811715 31811793 -218876061 + GA-rich Low_complexity Low_complexity 1 78 0 1243 92 0 6 chr2 31812328 31812501 -218875353 - AluSg/x SINE Alu -10 302 131 27 49 0 0 chr2 31813221 31813262 -218874592 + GC_rich Low_complexity Low_complexity 1 41 0 2293 85 0 0 chr2 31814325 31814619 -218873235 - AluSg SINE Alu -16 294 1 195 215 92 0 chr2 31814622 31814687 -218873167 - MIR SINE MIR -6 256 186 393 200 11 22 chr2 31814729 31814819 -218873035 - MIR SINE MIR -71 191 103 2041 131 3 3 chr2 31815272 31815570 -218872284 - AluSx SINE Alu -10 302 5 815 222 0 0 chr2 31815688 31815859 -218871995 + AluSc SINE Alu 1 171 -138 271 195 0 0 chr2 31816311 31816352 -218871502 - Alu SINE Alu -260 41 1 346 263 86 59 chr2 31816416 31816448 -218871406 + MIR3 SINE MIR 34 64 -144 2206 108 0 3 chr2 31816448 31816744 -218871110 - AluSx SINE Alu -17 295 1 346 263 86 59 chr2 31816744 31816863 -218870991 + MIR3 SINE MIR 64 189 -19 270 0 0 0 chr2 31816867 31816897 -218870957 + (TG)n Simple_repeat Simple_repeat 1 30 0 2367 50 4 0 chr2 31816897 31817176 -218870678 - AluY SINE Alu -31 280 1 725 134 0 0 chr2 31817419 31817516 -218870338 + AluSq SINE Alu 2 98 -214 1495 133 5 0 chr2 31817636 31817854 -218870000 + AluSq SINE Alu 94 312 -1 541 255 80 14 chr2 31819255 31819467 -218868387 - HAL1b LINE L1 -750 598 373 4546 149 41 37 chr2 31819502 31821012 -218866842 - L1PA16 LINE L1 -104 6062 4544 1712 226 0 41 chr2 31821012 31821293 -218866561 + L1 LINE L1 4136 4394 -1752 2392 82 0 16 chr2 31821293 31821610 -218866244 + AluSx SINE Alu 1 312 0 1712 226 0 41 chr2 31821610 31821765 -218866089 + L1 LINE L1 4394 4554 -1592 1589 137 29 4 chr2 31822141 31822382 -218865472 + AluSx SINE Alu 54 300 -12 664 157 74 25 chr2 31822389 31822510 -218865344 + AluJb SINE Alu 2 128 -184 42 0 0 0 chr2 31822516 31822558 -218865296 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 31822691 31822714 -218865140 + AT_rich Low_complexity Low_complexity 1 23 0 260 150 0 0 chr2 31823738 31823778 -218864076 - L1M4 LINE L1 -1584 4562 4523 * 1922 234 50 27 chr2 31823775 31824154 -218863700 + L1ME1 LINE L1 5551 5951 -215 2020 93 62 7 chr2 31824154 31824443 -218863411 - AluSc SINE Alu -4 305 1 1922 234 50 27 chr2 31824443 31824661 -218863193 + L1ME1 LINE L1 5951 6162 -4 1946 146 7 10 chr2 31824733 31825034 -218862820 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 31825195 31825239 -218862615 + AT_rich Low_complexity Low_complexity 1 44 0 242 139 18 2 chr2 31825457 31825623 -218862231 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 31825705 31825749 -218862105 + AT_rich Low_complexity Low_complexity 1 44 0 1943 132 17 10 chr2 31826351 31826640 -218861214 + AluSp SINE Alu 1 291 -22 1975 135 3 20 chr2 31826841 31827144 -218860710 - AluJb SINE Alu -14 298 1 312 167 0 0 chr2 31827146 31827194 -218860660 - MER58 DNA MER1_type -133 82 35 1634 173 0 33 chr2 31828024 31828330 -218859524 + AluJo SINE Alu 1 296 -16 2280 84 44 0 chr2 31828332 31828628 -218859226 + AluSg SINE Alu 1 309 -1 216 0 0 0 chr2 31829093 31829117 -218858737 + (T)n Simple_repeat Simple_repeat 1 24 0 1637 131 25 0 chr2 31829126 31829363 -218858491 - AluSx SINE Alu -69 243 1 2388 57 0 0 chr2 31829365 31829677 -218858177 - AluY SINE Alu 0 312 1 1544 176 4 11 chr2 31829677 31829955 -218857899 - AluJb SINE Alu -11 301 26 1160 60 0 0 chr2 31830136 31830269 -218857585 + AluSq/x SINE Alu 1 133 -180 2139 113 0 10 chr2 31830274 31830583 -218857271 + AluSg SINE Alu 1 306 -4 857 302 82 36 chr2 31830621 31831053 -218856801 + HAL1 LINE L1 583 1040 -1467 2342 97 0 10 chr2 31831053 31831361 -218856493 + AluSx SINE Alu 1 305 -7 857 302 82 36 chr2 31831361 31831402 -218856452 + HAL1 LINE L1 1040 1078 -1429 2040 93 45 0 chr2 31831456 31831725 -218856129 + AluSq SINE Alu 1 281 -32 1423 252 76 44 chr2 31831779 31832512 -218855342 + HAL1 LINE L1 1372 2128 -379 557 168 88 18 chr2 31832770 31832883 -218854971 + FLAM_A SINE Alu 22 142 0 335 290 145 8 chr2 31834187 31834311 -218853543 + MIR3 SINE MIR 60 200 -8 277 237 26 61 chr2 31834560 31834674 -218853180 - MER113 DNA MER1_type? -406 115 6 1980 159 0 0 chr2 31835067 31835369 -218852485 + AluSq SINE Alu 2 303 -10 25 0 0 0 chr2 31835412 31835437 -218852417 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 31835588 31835612 -218852242 + AT_rich Low_complexity Low_complexity 1 24 0 2332 75 20 13 chr2 31835615 31835920 -218851934 - AluSc SINE Alu -2 307 1 1103 139 6 0 chr2 31835922 31836088 -218851766 - AluSg/x SINE Alu -20 290 124 1876 166 0 17 chr2 31836132 31836434 -218851420 + AluSx SINE Alu 1 297 -15 27 49 0 0 chr2 31837001 31837042 -218850812 + AT_rich Low_complexity Low_complexity 1 41 0 28 29 0 0 chr2 31837508 31837543 -218850311 + AT_rich Low_complexity Low_complexity 1 35 0 2363 59 39 0 chr2 31837655 31837941 -218849913 + AluSp SINE Alu 5 301 -12 26 50 0 0 chr2 31838342 31838382 -218849472 + AT_rich Low_complexity Low_complexity 1 40 0 1499 159 51 48 chr2 31838481 31838776 -218849078 - AluJo SINE Alu -16 296 1 1133 108 0 0 chr2 31838808 31838966 -218848888 + AluSc SINE Alu 152 309 0 2312 108 0 3 chr2 31839033 31839338 -218848516 + AluSx SINE Alu 2 305 -7 1383 141 173 0 chr2 31839514 31839763 -218848091 + AluJb SINE Alu 1 292 -20 2275 114 0 0 chr2 31840253 31840552 -218847302 + AluSg SINE Alu 1 299 -11 388 129 0 0 chr2 31840584 31840646 -218847208 + L1MA1 LINE L1 6059 6120 -182 1629 138 0 0 chr2 31840646 31840870 -218846984 + AluSx SINE Alu 1 224 -88 387 0 0 0 chr2 31840885 31840928 -218846926 + (CTA)n Simple_repeat Simple_repeat 1 43 0 40 37 0 0 chr2 31840930 31840984 -218846870 + AT_rich Low_complexity Low_complexity 1 54 0 227 229 92 28 chr2 31841125 31841234 -218846620 + L1ME LINE L1 1924 2039 -4501 2148 110 40 3 chr2 31841636 31841935 -218845919 - AluSg SINE Alu 0 310 1 314 319 104 22 chr2 31841935 31842070 -218845784 + MIR SINE MIR 117 262 0 303 308 26 17 chr2 31842075 31842192 -218845662 - L3 LINE CR1 -569 1008 891 280 311 88 28 chr2 31842758 31843112 -218844742 + L1ME LINE L1 4646 5020 -1520 27 29 0 0 chr2 31843378 31843412 -218844442 + AT_rich Low_complexity Low_complexity 1 34 0 419 215 143 53 chr2 31843448 31843657 -218844197 + L1ME LINE L1 5870 6097 -418 21 0 0 0 chr2 31844196 31844217 -218843637 + AT_rich Low_complexity Low_complexity 1 21 0 201 241 149 11 chr2 31845048 31845135 -218842719 + MIR SINE MIR 92 190 -72 310 263 24 124 chr2 31845632 31845841 -218842013 - MIR SINE MIR -13 249 62 546 176 0 11 chr2 31846416 31846507 -218841347 + 5S rRNA rRNA 1 90 -31 319 319 94 33 chr2 31846786 31846999 -218840855 - MIR SINE MIR 0 262 37 1594 127 0 13 chr2 31847584 31847813 -218840041 + AluSg/x SINE Alu 87 312 0 1223 282 75 38 chr2 31848052 31848131 -218839723 - L1ME3A LINE L1 -280 5890 5815 1169 124 0 5 chr2 31848131 31848317 -218839537 - L1PA14 LINE L1 -1 6160 5976 1223 282 75 38 chr2 31848317 31848846 -218839008 - L1ME3A LINE L1 -355 5815 5259 222 209 11 33 chr2 31849197 31849288 -218838566 + CT-rich Low_complexity Low_complexity 3 91 0 618 255 43 49 chr2 31849326 31849655 -218838199 - L1ME3A LINE L1 -1493 4653 4327 202 333 126 54 chr2 31850219 31850537 -218837317 + L2 LINE L2 2306 2650 -664 2088 160 11 11 chr2 31850537 31850912 -218836942 - THE1C LTR MaLR 0 375 1 202 333 126 54 chr2 31850912 31850926 -218836928 + L2 LINE L2 2650 2662 -652 614 194 125 6 chr2 31851031 31851191 -218836663 - MER97a DNA MER1_type? -715 179 1 223 255 20 0 chr2 31853215 31853266 -218834588 - MIR SINE MIR -55 153 102 367 348 12 12 chr2 31853593 31853754 -218834100 - MIR3 SINE MIR -1 207 47 512 259 40 59 chr2 31855301 31855503 -218832351 - L1ME4a LINE L1 -45 6076 5881 2165 137 0 3 chr2 31855503 31855810 -218832044 - AluSx SINE Alu -6 306 1 512 259 40 59 chr2 31855810 31855928 -218831926 - L1ME4a LINE L1 -240 5881 5762 435 209 43 122 chr2 31855932 31856162 -218831692 - L1ME4a LINE L1 -295 5826 5615 23 33 0 0 chr2 31856177 31856207 -218831647 + AT_rich Low_complexity Low_complexity 1 30 0 271 310 30 0 chr2 31857755 31857855 -218829999 + MIR SINE MIR 83 185 -77 268 311 33 33 chr2 31859437 31859527 -218828327 + MIR SINE MIR 8 97 -165 276 247 75 0 chr2 31859574 31859667 -218828187 - MIR SINE MIR -38 224 125 * 278 311 47 9 chr2 31859659 31859765 -218828089 + MIR SINE MIR 140 249 -13 2372 73 0 10 chr2 31860779 31861095 -218826759 + AluSq SINE Alu 1 313 0 1814 176 3 7 chr2 31861099 31861400 -218826454 + AluSx SINE Alu 1 300 -12 2287 85 11 0 chr2 31861525 31861858 -218825996 - AluSq SINE Alu 0 336 1 235 325 62 0 chr2 31862975 31863055 -218824799 + MIR SINE MIR 30 114 -94 412 275 194 5 chr2 31863286 31863497 -218824357 + MIR SINE MIR 7 257 -5 234 0 0 0 chr2 31863633 31863659 -218824195 + (TA)n Simple_repeat Simple_repeat 2 27 0 2360 83 0 58 chr2 31863659 31863985 -218823869 - AluSp SINE Alu -6 307 1 2212 113 0 0 chr2 31865005 31865288 -218822566 - AluSx SINE Alu -16 296 14 186 45 68 23 chr2 31865392 31865436 -218822418 + T-rich Low_complexity Low_complexity 2 47 0 26 50 0 0 chr2 31865447 31865487 -218822367 + AT_rich Low_complexity Low_complexity 1 40 0 193 216 20 0 chr2 31866405 31866456 -218821398 + L2 LINE L2 3000 3051 -221 270 203 0 34 chr2 31867795 31867854 -218820000 + MIR SINE MIR 117 173 -89 515 271 60 102 chr2 31868078 31868344 -218819510 + MIR SINE MIR 7 261 -1 2408 98 0 7 chr2 31868365 31868671 -218819183 - AluSc SINE Alu -5 304 1 189 254 68 0 chr2 31870260 31870319 -218817535 + MIR SINE MIR 120 182 -80 310 207 0 0 chr2 31870436 31870494 -218817360 - MER91B DNA MER1_type -127 63 6 1548 117 0 0 chr2 31870536 31870780 -218817074 - AluSc SINE Alu 0 309 98 217 239 15 15 chr2 31871254 31871321 -218816533 + (CA)n Simple_repeat Simple_repeat 2 68 0 306 0 0 0 chr2 31871351 31871385 -218816469 + (CA)n Simple_repeat Simple_repeat 1 34 0 298 352 16 16 chr2 31871556 31871684 -218816170 + MER91A DNA MER1_type 57 184 -12 196 203 43 43 chr2 31872181 31872250 -218815604 - MIR SINE MIR -117 145 77 466 268 21 20 chr2 31872837 31873013 -218814841 + MIR SINE MIR 19 192 -65 225 264 0 0 chr2 31873568 31873621 -218814233 - MIR SINE MIR -110 152 100 482 240 71 19 chr2 31874133 31874287 -218813567 - MIR3 SINE MIR -29 179 18 197 223 125 71 chr2 31874372 31874484 -218813370 - MIR SINE MIR -35 227 110 276 246 0 29 chr2 31874543 31874612 -218813242 - L2 LINE L2 -1 3312 3246 201 39 0 0 chr2 31875548 31875574 -218812280 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 308 254 112 52 chr2 31875616 31875750 -218812104 + MIR SINE MIR 61 202 -60 298 215 38 0 chr2 31876045 31876124 -218811730 + MIR3 SINE MIR 93 174 -34 746 296 9 26 chr2 31876624 31876857 -218810997 + MIR SINE MIR 13 241 -21 824 162 92 0 chr2 31876875 31877048 -218810806 + MER5A DNA MER1_type 1 189 0 273 239 15 0 chr2 31877386 31877453 -218810401 + MIR SINE MIR 68 135 -73 2200 103 3 3 chr2 31878023 31878315 -218809539 + AluSx SINE Alu 1 292 -20 413 294 128 37 chr2 31878316 31878534 -218809320 - MIR SINE MIR -5 257 20 424 271 148 48 chr2 31879171 31879381 -218808473 + MIR SINE MIR 26 256 -6 381 269 46 0 chr2 31880500 31880630 -218807224 + MIR SINE MIR 111 246 -16 2100 116 17 7 chr2 31880740 31881033 -218806821 + AluSx SINE Alu 1 296 -16 6296 138 62 16 chr2 31882143 31882638 -218805216 - Tigger3b DNA MER2_type -1797 1231 760 2349 70 17 17 chr2 31882638 31882937 -218804917 - AluSc SINE Alu -10 299 1 6296 138 62 16 chr2 31882937 31883618 -218804236 - Tigger3b DNA MER2_type -2268 760 1 199 211 19 19 chr2 31883619 31883671 -218804183 - MER5B DNA MER1_type -123 55 4 366 61 0 0 chr2 31884866 31884915 -218802939 + (CA)n Simple_repeat Simple_repeat 2 50 0 485 318 33 33 chr2 31885586 31885797 -218802057 - MIR SINE MIR -5 257 47 1112 210 106 112 chr2 31887461 31887966 -218799888 - LTR36 LTR ERV1 0 611 109 1915 121 7 59 chr2 31887966 31888271 -218799583 - AluSx SINE Alu -23 289 1 1112 210 106 112 chr2 31888271 31888380 -218799474 - LTR36 LTR ERV1 -502 109 1 459 299 124 41 chr2 31889265 31889629 -218798225 + MLT1I LTR MaLR 9 402 -7 2446 102 0 0 chr2 31889731 31890036 -218797818 + AluSg SINE Alu 1 305 -5 262 224 26 13 chr2 31890272 31890348 -218797506 + MLT1J LTR MaLR 95 171 -340 * 279 270 27 14 chr2 31890287 31890361 -218797493 + LTR67 LTR ERVL 115 189 -368 180 158 0 0 chr2 31890625 31890663 -218797191 + (TG)n Simple_repeat Simple_repeat 2 39 0 393 22 0 0 chr2 31892055 31892101 -218795753 + (CA)n Simple_repeat Simple_repeat 1 46 0 219 88 0 0 chr2 31892104 31892138 -218795716 + (TC)n Simple_repeat Simple_repeat 1 34 0 1495 201 39 24 chr2 31893190 31893528 -218794326 + LTR16A LTR ERVL 108 450 0 1293 169 24 4 chr2 31894966 31895214 -218792640 + L1MC1 LINE L1 6075 6327 -6 2202 115 0 3 chr2 31895214 31895509 -218792345 + AluSq SINE Alu 1 294 -19 28 29 0 0 chr2 31895509 31895544 -218792310 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 31895673 31895699 -218792155 + AT_rich Low_complexity Low_complexity 1 26 0 408 20 0 0 chr2 31896421 31896470 -218791384 + (TG)n Simple_repeat Simple_repeat 1 49 0 307 264 169 14 chr2 31896761 31896909 -218790945 + MIR SINE MIR 79 249 -13 268 170 0 0 chr2 31897728 31897775 -218790079 + FLAM_A SINE Alu 27 73 -59 * 607 224 9 0 chr2 31897773 31897889 -218789965 + AluJo/FRAM SINE Alu 162 278 -34 219 69 0 0 chr2 31897921 31897950 -218789904 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 638 224 68 96 chr2 31898365 31898615 -218789239 - MIR SINE MIR 0 262 20 1935 70 8 8 chr2 31898748 31899007 -218788847 - AluSp SINE Alu -1 312 54 442 214 36 45 chr2 31900257 31900323 -218787531 + MER81 DNA DNA 1 67 -47 4309 90 0 0 chr2 31900323 31900877 -218786977 + MER41A LTR ERV1 1 554 0 442 214 36 45 chr2 31900877 31900922 -218786932 + MER81 DNA DNA 67 111 -3 1978 171 88 79 chr2 31901567 31902110 -218785744 + LTR10A LTR ERV1 1 548 -61 334 292 37 27 chr2 31902367 31902477 -218785377 + MIR SINE MIR 38 147 -67 2403 106 59 0 chr2 31902477 31902817 -218785037 + MLT1A1 LTR MaLR 1 360 -5 5410 94 1 11 chr2 31902818 31903561 -218784293 + LTR17 LTR ERV1 1 780 0 1372 200 34 0 chr2 31903717 31903982 -218783872 + AluJo SINE Alu 5 278 -34 198 103 0 0 chr2 31904014 31904043 -218783811 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 251 233 233 12 chr2 31904536 31904622 -218783232 - MIR SINE MIR -70 138 34 1760 151 23 0 chr2 31904770 31905069 -218782785 - AluSq SINE Alu -7 306 1 204 97 0 0 chr2 31905150 31905181 -218782673 + (GA)n Simple_repeat Simple_repeat 2 32 0 279 360 8 8 chr2 31905339 31905464 -218782390 - L2 LINE L2 0 3272 3148 408 281 0 0 chr2 31905477 31905573 -218782281 + MIR SINE MIR 59 154 -108 4421 98 32 33 chr2 31906733 31907394 -218780460 - PABL_A LTR ERV1 0 660 1 1945 145 3 0 chr2 31907974 31908278 -218779576 + AluSx SINE Alu 1 305 -7 535 268 111 26 chr2 31908677 31908830 -218779024 + MLT1I LTR MaLR 98 263 -146 2105 95 3 26 chr2 31908988 31909292 -218778562 + AluSp SINE Alu 1 297 -16 1726 152 26 3 chr2 31909841 31910143 -218777711 - AluJb SINE Alu -3 309 1 469 152 13 0 chr2 31910312 31910391 -218777463 + MLT1I LTR MaLR 324 403 -6 576 254 35 7 chr2 31910401 31910543 -218777311 - MIR3 SINE MIR -33 175 30 3416 151 25 79 chr2 31910565 31911296 -218776558 - LTR8 LTR ERV1 0 691 1 480 242 40 16 chr2 31911332 31911456 -218776398 + MIR3 SINE MIR 41 167 -41 3902 160 50 11 chr2 31911578 31912278 -218775576 - LTR8A LTR ERV1 0 727 1 1144 149 21 21 chr2 31912947 31913141 -218774713 + MLT1A1 LTR MaLR 1 194 -171 340 216 114 0 chr2 31913152 31913240 -218774614 - MIR SINE MIR -70 138 41 4857 128 67 5 chr2 31913313 31914089 -218773765 + LTR1B LTR ERV1 1 824 -2 221 293 177 71 chr2 31914409 31914607 -218773247 + MIR SINE MIR 20 238 -24 238 315 74 60 chr2 31916031 31916247 -218771607 - MIR SINE MIR -42 220 2 432 341 68 0 chr2 31916586 31916835 -218771019 + L1PA14 LINE L1 5648 5913 -248 * 2295 155 35 12 chr2 31916617 31917042 -218770812 + L1MB5 LINE L1 5686 6120 -54 271 246 90 49 chr2 31918296 31918418 -218769436 - MIR SINE MIR -44 218 92 1019 251 132 20 chr2 31919112 31919415 -218768439 - MER46C DNA MER2_type 0 338 2 677 287 30 10 chr2 31919415 31919617 -218768237 - MIR SINE MIR -1 261 56 401 287 182 19 chr2 31919915 31920124 -218767730 + MIR SINE MIR 4 246 -16 293 264 69 11 chr2 31920884 31920971 -218766883 + L2 LINE L2 3181 3272 0 294 106 0 0 chr2 31922597 31922644 -218765210 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 321 34 17 chr2 31922980 31923340 -218764514 + ERVL LTR ERVL 4555 4698 -298 334 260 15 1 chr2 31923413 31923503 -218764351 + LTR16A LTR ERVL 5 95 -355 2382 132 3 8 chr2 31923527 31923897 -218763957 - L1PB1 LINE L1 -3 6148 5781 339 262 71 0 chr2 31923897 31923974 -218763880 + L1MC4 LINE L1 6613 6698 -1344 313 71 0 0 chr2 31923974 31924016 -218763838 - L1PB1 LINE L1 -360 5791 5750 15292 182 74 14 chr2 31924016 31930100 -218757754 - L1P5 LINE L1 -357 6510 90 2235 91 0 0 chr2 31930362 31930691 -218757163 - AluSc SINE Alu 0 329 1 459 310 64 23 chr2 31931199 31931370 -218756484 + MIR SINE MIR 20 197 -65 1821 144 14 7 chr2 31931540 31931831 -218756023 - AluJo SINE Alu -19 293 1 4408 135 20 0 chr2 31931831 31932526 -218755328 - L1MC1 LINE L1 -9 6324 5616 579 275 42 0 chr2 31932528 31932670 -218755184 + MIR SINE MIR 107 254 -8 846 204 34 24 chr2 31933942 31934148 -218753706 + MER3 DNA MER1_type 2 209 0 646 310 70 11 chr2 31934196 31934480 -218753374 + L2 LINE L2 2521 2821 -493 861 159 12 65 chr2 31934669 31934839 -218753015 - MER3 DNA MER1_type 0 209 49 470 272 109 105 chr2 31934863 31935176 -218752678 + L2 LINE L2 2958 3271 -1 259 325 53 9 chr2 31935300 31935414 -218752440 + MIR SINE MIR 100 218 -44 533 240 32 32 chr2 31935828 31935982 -218751872 + MER5A DNA MER1_type 10 163 -26 333 151 14 55 chr2 31937434 31937507 -218750347 - L1ME2 LINE L1 -2 6162 6093 235 187 165 55 chr2 31937702 31937793 -218750061 + L1ME4a LINE L1 5703 5803 -2005 232 206 95 0 chr2 31937844 31937907 -218749947 + L1ME4a LINE L1 5983 6051 -70 2443 194 88 40 chr2 31938322 31938445 -218749409 + MLT1E2 LTR MaLR 7 123 -503 2137 110 10 0 chr2 31938445 31938746 -218749108 + AluSx SINE Alu 1 304 -8 2443 194 88 40 chr2 31938746 31939214 -218748640 + MLT1E2 LTR MaLR 123 626 0 288 298 38 127 chr2 31939217 31939509 -218748345 + L2 LINE L2 3004 3269 -3 320 322 75 37 chr2 31939788 31940083 -218747771 + L1MEd LINE L1 12 317 -5802 2340 223 87 49 chr2 31940114 31940826 -218747028 + MER21B LTR ERV1 12 750 -113 232 226 0 32 chr2 31941272 31941334 -218746520 - MIR SINE MIR -10 252 193 463 276 39 108 chr2 31941445 31941778 -218746076 + MLT1I LTR MaLR 94 403 -6 589 266 78 29 chr2 31941791 31942137 -218745717 + L1MEd LINE L1 895 1257 -4862 225 230 40 70 chr2 31942261 31942361 -218745493 + L1M2 LINE L1 2440 2536 -4313 331 346 92 30 chr2 31943115 31943410 -218744444 + L1ME3A LINE L1 5617 5929 -241 2388 219 53 48 chr2 31943424 31943697 -218744157 - L1ME3A LINE L1 -5 6165 5895 1355 176 3 83 chr2 31943697 31943890 -218743964 - AluJb SINE Alu -14 298 140 1738 141 58 0 chr2 31943890 31944181 -218743673 + AluSg SINE Alu 1 308 -2 1355 176 3 83 chr2 31944181 31944311 -218743543 - AluJb SINE Alu -172 140 1 2388 219 53 48 chr2 31944311 31944750 -218743104 - L1ME3A LINE L1 -275 5895 5449 1155 200 5 9 chr2 31945573 31945788 -218742066 - MER20 DNA MER1_type -5 214 1 415 267 123 14 chr2 31946296 31946442 -218741412 - LTR16A1 LTR ERVL -295 162 1 1055 192 18 5 chr2 31946577 31946801 -218741053 - AluJo SINE Alu 0 312 86 355 294 84 20 chr2 31946803 31946994 -218740860 - MIR SINE MIR -48 214 8 546 295 68 10 chr2 31948340 31948547 -218739307 - MIR SINE MIR -24 238 20 354 282 0 0 chr2 31948564 31948642 -218739212 + MIR SINE MIR 109 186 -76 449 250 9 9 chr2 31949154 31949262 -218738592 - MIR SINE MIR -65 197 90 419 317 75 0 chr2 31950582 31950743 -218737111 + MIR3 SINE MIR 21 193 -15 195 310 42 0 chr2 31951507 31951578 -218736276 + MIR SINE MIR 140 213 -49 234 0 0 0 chr2 31952315 31952341 -218735513 + (TG)n Simple_repeat Simple_repeat 2 27 0 289 279 67 42 chr2 31952767 31952932 -218734922 - MIR3 SINE MIR -3 205 37 1790 174 16 20 chr2 31952968 31953273 -218734581 - AluJo SINE Alu -6 306 3 331 318 131 0 chr2 31954285 31954392 -218733462 - L2 LINE L2 0 3272 3152 423 330 11 16 chr2 31956419 31956601 -218731253 + MER5A DNA MER1_type 9 189 0 2231 123 0 3 chr2 31956819 31957129 -218730725 - AluSx SINE Alu -3 309 1 208 276 40 0 chr2 31958355 31958431 -218729423 + L2 LINE L2 3194 3272 0 2264 123 0 0 chr2 31958564 31958874 -218728980 - AluSx SINE Alu -2 310 1 1428 215 45 33 chr2 31959836 31960171 -218727683 + MER58B DNA MER1_type 2 340 -1 483 133 29 0 chr2 31961390 31961495 -218726359 + (TA)n Simple_repeat Simple_repeat 2 109 0 245 206 14 14 chr2 31961543 31961616 -218726238 + L1MCa LINE L1 1995 2067 -4359 356 217 39 72 chr2 31961625 31961805 -218726049 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 * 407 249 35 12 chr2 31961686 31961855 -218725999 + (TA)n Simple_repeat Simple_repeat 2 174 0 209 197 16 0 chr2 31961896 31961957 -218725897 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 212 286 0 0 chr2 31961973 31962036 -218725818 + (CATA)n Simple_repeat Simple_repeat 1 63 0 350 307 104 5 chr2 31962989 31963181 -218724673 + L2 LINE L2 2567 2777 -537 439 254 49 0 chr2 31963617 31963739 -218724115 - MIR SINE MIR -26 236 109 243 272 0 0 chr2 31963776 31963857 -218723997 + (TG)n Simple_repeat Simple_repeat 2 82 0 381 301 41 0 chr2 31966142 31966288 -218721566 - MIR3 SINE MIR -15 193 42 229 244 0 70 chr2 31967361 31967447 -218720407 - MIR SINE MIR -73 189 110 2398 68 3 0 chr2 31968473 31968765 -218719089 - AluSc SINE Alu -3 306 14 3666 237 94 62 chr2 31968942 31970510 -218717344 - HAL1 LINE L1 -10 2497 880 180 367 0 0 chr2 31970640 31970689 -218717165 + L2 LINE L2 3137 3185 -87 884 165 0 0 chr2 31970992 31971125 -218716729 - AluSq/x SINE Alu -180 133 1 9589 212 62 36 chr2 31971501 31974400 -218713454 + L1MDa LINE L1 54 2874 -3666 1456 214 144 42 chr2 31974400 31974858 -218712996 + MLT1D LTR MaLR 1 505 0 9589 212 62 36 chr2 31974858 31975597 -218712257 + L1MDa LINE L1 2874 3788 -2752 1545 176 27 40 chr2 31975597 31975971 -218711883 + L1MA3 LINE L1 5937 6305 0 9589 212 62 36 chr2 31975971 31976075 -218711779 + L1MDa LINE L1 3788 3888 -2652 1948 84 3 1 chr2 31976099 31976376 -218711478 + L1MDa LINE L1 2939 3219 -3321 2794 221 46 34 chr2 31976388 31977178 -218710676 + L1MDa LINE L1 3901 4699 -1841 635 222 108 54 chr2 31977177 31977362 -218710492 + L1MB7 LINE L1 5416 5610 -564 * 209 125 0 25 chr2 31977457 31977497 -218710357 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 1119 211 76 58 chr2 31978200 31978320 -218709534 + Tigger7 DNA MER2_type 1 117 -2370 2359 94 0 10 chr2 31978320 31978629 -218709225 + AluSx SINE Alu 1 306 -6 1119 211 76 58 chr2 31978629 31979047 -218708807 + Tigger7 DNA MER2_type 117 2487 0 2069 232 59 16 chr2 31980876 31981134 -218706720 + L1MB7 LINE L1 5587 5832 -352 2229 116 7 0 chr2 31981134 31981437 -218706417 + AluSx SINE Alu 1 305 -7 2069 232 59 16 chr2 31981437 31981751 -218706103 + L1MB7 LINE L1 5832 6184 0 225 264 85 19 chr2 31981853 31981959 -218705895 - L1ME4a LINE L1 -110 6011 5899 307 183 113 0 chr2 31984596 31984667 -218703187 - MIR3 SINE MIR -45 163 85 289 267 192 14 chr2 31984691 31984837 -218703017 - MIR SINE MIR -31 231 60 288 248 172 14 chr2 31986492 31986637 -218701217 - L3 LINE CR1 -1 1576 1409 288 262 255 0 chr2 31986941 31987090 -218700764 + MER117 DNA MER1_type 5 191 -6 26 0 0 0 chr2 31987416 31987442 -218700412 + AT_rich Low_complexity Low_complexity 1 26 0 214 273 26 52 chr2 31988742 31988819 -218699035 - L2 LINE L2 -8 3305 3231 860 135 0 30 chr2 31988823 31988956 -218698898 + FLAM_C SINE Alu 2 130 -3 391 296 30 9 chr2 31989385 31989527 -218698327 - MIR SINE MIR -31 177 47 652 197 8 0 chr2 31990059 31990186 -218697668 + MIR SINE MIR 45 172 -90 642 212 84 80 chr2 31990685 31991061 -218696793 + L1ME4a LINE L1 5704 6077 -44 865 249 11 51 chr2 31991119 31991392 -218696462 - MIR SINE MIR 0 262 1 997 217 77 0 chr2 31991393 31991600 -218696254 + MER58A DNA MER1_type 1 223 -1 324 0 0 0 chr2 31991637 31991673 -218696181 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 186 346 0 10 chr2 31992302 31992403 -218695451 + L2 LINE L2 2897 2996 -276 305 245 19 28 chr2 31992413 31992519 -218695335 + L1ME4a LINE L1 5837 5941 -180 211 203 43 29 chr2 31992529 31992598 -218695256 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 289 250 24 40 chr2 31992619 31992743 -218695111 + L1ME4a LINE L1 5942 6063 -58 187 311 33 0 chr2 31992892 31992953 -218694901 + L2 LINE L2 3247 3309 -4 1182 108 0 0 chr2 31993086 31993274 -218694580 - AluSp/q SINE Alu 0 344 157 288 253 33 11 chr2 31993754 31993845 -218694009 + MIR SINE MIR 48 140 -122 578 291 44 35 chr2 31993875 31994102 -218693752 - MIR SINE MIR 0 262 34 360 253 6 17 chr2 31994202 31994376 -218693478 + (TAG)n Simple_repeat Simple_repeat 1 172 0 265 333 0 11 chr2 31994399 31994486 -218693368 + (CAG)n Simple_repeat Simple_repeat 1 86 0 571 211 12 0 chr2 31994496 31994662 -218693192 + (TAG)n Simple_repeat Simple_repeat 1 168 0 189 175 0 0 chr2 31994696 31994736 -218693118 + (TAA)n Simple_repeat Simple_repeat 2 41 0 272 286 0 7 chr2 31994771 31994918 -218692936 + (TAG)n Simple_repeat Simple_repeat 2 147 0 573 239 0 0 chr2 31994938 31995118 -218692736 + (TAG)n Simple_repeat Simple_repeat 1 180 0 1588 186 30 20 chr2 31995853 31996323 -218691531 + AluJb SINE Alu 3 475 0 348 242 61 20 chr2 31997635 31997734 -218690120 - MIR SINE MIR -74 188 86 1863 189 58 58 chr2 31998260 31998399 -218689455 + MER63B DNA MER1_type 1 139 -923 2440 187 77 4 chr2 31998399 31998918 -218688936 + MER68 LTR ERV1 4 560 -2 1863 189 58 58 chr2 31998918 31999095 -218688759 + MER63B DNA MER1_type 139 320 -742 2181 130 0 0 chr2 31999095 31999394 -218688460 - AluSx SINE Alu -7 305 7 1863 189 58 58 chr2 31999394 31999511 -218688343 + MER63B DNA MER1_type 319 435 -1 21 36 0 0 chr2 32000486 32000514 -218687340 + AT_rich Low_complexity Low_complexity 1 28 0 473 170 57 60 chr2 32000882 32001020 -218686834 + MER5A DNA MER1_type 25 189 0 380 333 31 8 chr2 32001375 32001504 -218686350 - MIR3 SINE MIR -67 141 10 223 176 24 240 chr2 32001510 32001635 -218686219 + MER5B DNA MER1_type 75 172 -6 345 24 0 0 chr2 32002224 32002266 -218685588 + (TG)n Simple_repeat Simple_repeat 2 43 0 687 187 47 0 chr2 32002292 32002442 -218685412 - MIR SINE MIR -32 230 74 566 175 58 42 chr2 32003196 32003316 -218684538 + FRAM SINE Alu 42 163 -13 332 309 32 8 chr2 32004052 32004175 -218683679 + L2 LINE L2 3142 3267 -5 330 268 55 8 chr2 32004194 32004321 -218683533 - MIR SINE MIR -70 192 60 246 289 29 48 chr2 32004830 32004934 -218682920 - MIR SINE MIR -76 186 85 722 130 0 8 chr2 32005027 32005150 -218682704 + (GGAA)n Simple_repeat Simple_repeat 2 123 0 216 0 0 0 chr2 32005496 32005520 -218682334 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 231 311 93 71 chr2 32005641 32005824 -218682030 - L2 LINE L2 -91 3181 2995 192 77 0 0 chr2 32007577 32007603 -218680251 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 5773 199 36 22 chr2 32007951 32009946 -218677908 - L1MC1 LINE L1 -5 6608 4592 * 11670 191 60 21 chr2 32009942 32010500 -218677354 - L1MC1 LINE L1 -2524 3902 3367 2250 104 0 0 chr2 32010500 32010825 -218677029 - AluSg SINE Alu 0 327 3 11670 191 60 21 chr2 32010825 32014020 -218673834 - L1MC1 LINE L1 -3059 3367 2 246 303 119 28 chr2 32014574 32014697 -218673157 - MIR SINE MIR -12 250 140 544 77 26 0 chr2 32014697 32014775 -218673079 + MADE1 DNA Mariner 1 80 0 246 303 119 28 chr2 32014775 32014869 -218672985 - MIR SINE MIR -122 140 13 270 258 90 58 chr2 32015937 32016092 -218671762 + L2 LINE L2 2937 3096 -176 593 293 39 0 chr2 32016912 32017120 -218670734 + MIR SINE MIR 43 258 -4 669 229 146 4 chr2 32017177 32017417 -218670437 - L2 LINE L2 -811 2503 2230 2014 136 61 12 chr2 32017676 32018022 -218669832 + THE1B LTR MaLR 1 363 -1 1908 68 0 4 chr2 32018338 32018572 -218669282 - AluY SINE Alu -7 304 72 313 291 60 8 chr2 32018736 32018853 -218669001 - MER113 DNA MER1_type? -115 406 284 294 331 38 15 chr2 32019969 32020102 -218667752 - L2 LINE L2 0 3272 3137 965 264 19 19 chr2 32020277 32020542 -218667312 + MER93a LTR ERV1 128 392 -10 366 303 34 8 chr2 32020563 32020682 -218667172 - L2 LINE L2 -165 3107 2986 216 260 0 0 chr2 32021046 32021096 -218666758 + (CA)n Simple_repeat Simple_repeat 1 50 0 23 33 0 0 chr2 32022696 32022726 -218665128 + AT_rich Low_complexity Low_complexity 1 30 0 322 258 94 31 chr2 32023222 32023381 -218664473 + MIR SINE MIR 94 262 0 2246 150 75 5 chr2 32024181 32024581 -218663273 + MSTA LTR MaLR 1 428 0 606 235 162 0 chr2 32026588 32026792 -218661062 + L1MC4 LINE L1 6979 7215 -827 5284 99 11 5 chr2 32026792 32027547 -218660307 + L1MA2 LINE L1 5546 6304 0 4674 143 72 19 chr2 32027640 32028505 -218659349 + L1MB3 LINE L1 5270 6180 -3 2112 235 69 25 chr2 32028492 32029107 -218658747 + L1MC4 LINE L1 7182 7831 -211 * 2170 103 7 3 chr2 32029107 32029408 -218658446 + AluSg1 SINE Alu 1 302 -7 2112 235 69 25 chr2 32029408 32029477 -218658377 + L1MC4 LINE L1 7831 7896 -146 21 82 0 0 chr2 32029489 32029538 -218658316 + AT_rich Low_complexity Low_complexity 1 49 0 480 242 8 0 chr2 32029586 32029714 -218658140 + L1MC4 LINE L1 7914 8042 0 203 344 0 0 chr2 32029765 32029826 -218658028 - L2 LINE L2 0 3272 3212 181 377 54 15 chr2 32029897 32030027 -218657827 + L2 LINE L2 3122 3256 -16 353 75 19 0 chr2 32030038 32030091 -218657763 + (TGAG)n Simple_repeat Simple_repeat 2 55 0 2218 35 0 0 chr2 32030489 32030748 -218657106 + L1PA5 LINE L1 5895 6153 -1 214 373 0 0 chr2 32031237 32031312 -218656542 - L3 LINE CR1 -5 1572 1498 261 0 0 0 chr2 32033841 32033870 -218653984 + (A)n Simple_repeat Simple_repeat 1 29 0 435 158 25 125 chr2 32034131 32034251 -218653603 - MER81 DNA DNA -2 112 5 2121 121 7 0 chr2 32034267 32034557 -218653297 + AluSx SINE Alu 1 292 -20 889 174 54 27 chr2 32034597 32034781 -218653073 + MER20 DNA MER1_type 31 219 0 300 267 100 33 chr2 32034992 32035112 -218652742 + MIR SINE MIR 20 147 -115 1130 195 46 4 chr2 32035455 32035717 -218652137 - L1MA8 LINE L1 -3 6288 6016 950 131 0 0 chr2 32035718 32035848 -218652006 - AluSx SINE Alu -37 275 146 995 68 0 0 chr2 32036028 32036145 -218651709 - AluSx SINE Alu -170 142 26 4246 223 49 42 chr2 32036149 32038409 -218649445 - L1 LINE L1 -3664 3442 1478 1938 161 10 82 chr2 32038414 32038806 -218649048 - L1 LINE L1 -6666 364 1 393 264 28 56 chr2 32039727 32039871 -218647983 - MIR SINE MIR -56 206 67 310 301 57 8 chr2 32040008 32040131 -218647723 + L2 LINE L2 3136 3264 -8 724 300 60 23 chr2 32040894 32041330 -218646524 + MLT1J1 LTR MaLR 1 446 0 301 243 72 36 chr2 32041331 32041442 -218646412 + L2 LINE L2 3199 3313 0 208 186 0 68 chr2 32041573 32041632 -218646222 + T-rich Low_complexity Low_complexity 4 58 0 412 324 44 28 chr2 32041665 32041847 -218646007 + MIR3 SINE MIR 16 200 -8 2231 172 71 0 chr2 32042275 32042670 -218645184 + MSTB LTR MaLR 4 426 0 398 268 172 25 chr2 32043648 32043846 -218644008 - MIR SINE MIR -7 255 29 189 143 24 24 chr2 32045375 32045417 -218642437 + MIR3 SINE MIR 164 205 -3 494 31 16 0 chr2 32045426 32045490 -218642364 + (TG)n Simple_repeat Simple_repeat 2 66 0 2081 149 0 0 chr2 32045664 32045965 -218641889 - AluSx SINE Alu -9 303 3 1246 307 71 44 chr2 32046251 32046926 -218640928 + MER115 DNA AcHobo 1 693 0 205 324 120 32 chr2 32047149 32047365 -218640489 + L2 LINE L2 2826 3060 -212 297 315 68 17 chr2 32049718 32049889 -218637965 + MIR SINE MIR 3 183 -75 2499 75 0 3 chr2 32050247 32050554 -218637300 + AluY SINE Alu 1 306 -5 422 323 91 15 chr2 32050997 32051195 -218636659 - MLT1I LTR MaLR -142 267 55 1684 310 107 78 chr2 32051537 32053722 -218634132 - L2 LINE L2 -4 3268 1012 1490 175 101 27 chr2 32053851 32054216 -218633638 - L1ME2 LINE L1 -19 6145 5754 1107 243 97 7 chr2 32054217 32054679 -218633175 - L1ME2 LINE L1 -536 5628 5130 11318 22 0 0 chr2 32054717 32056106 -218631748 - L1PA3 LINE L1 -948 5198 3810 7497 32 2 0 chr2 32056106 32057125 -218630729 + L1PA3 LINE L1 5185 6205 0 1992 210 102 39 chr2 32057157 32057360 -218630494 - L1ME2 LINE L1 -1395 4751 4562 2454 55 7 3 chr2 32057360 32057670 -218630184 + AluY SINE Alu 1 311 0 1992 210 102 39 chr2 32057670 32058114 -218629740 - L1ME2 LINE L1 -1584 4562 4063 2319 98 0 28 chr2 32058562 32058880 -218628974 + AluSx SINE Alu 1 309 -3 298 332 159 5 chr2 32059123 32059343 -218628511 - MIR SINE MIR -5 257 4 339 298 32 0 chr2 32059405 32059499 -218628355 + L2 LINE L2 3150 3246 -26 236 305 43 39 chr2 32059735 32060017 -218627837 - L1ME2 LINE L1 -3754 2392 2110 2961 227 22 11 chr2 32060339 32061145 -218626709 + L1 LINE L1 2396 3210 -2936 1848 170 56 17 chr2 32061149 32061508 -218626346 - MSTA LTR MaLR -54 374 2 21 36 0 0 chr2 32061722 32061750 -218626104 + AT_rich Low_complexity Low_complexity 1 28 0 4076 103 31 5 chr2 32061751 32062362 -218625492 - L1PA14 LINE L1 -3 6158 5532 554 78 0 0 chr2 32062362 32062439 -218625415 + L1PA14 LINE L1 5451 5527 -634 5270 76 30 60 chr2 32062478 32063337 -218624517 + L1MA1 LINE L1 5468 6300 -2 272 177 51 13 chr2 32064305 32064384 -218623470 + MER103 DNA DNA 25 106 -60 2673 133 45 6 chr2 32064503 32064970 -218622884 - L1MB3 LINE L1 0 6183 5699 2784 79 3 0 chr2 32067016 32067370 -218620484 + THE1A LTR MaLR 1 355 0 18624 169 28 9 chr2 32068020 32069746 -218618108 + L1MA2 LINE L1 13 1705 -5860 876 69 46 17 chr2 32069746 32069919 -218617935 + GA-rich Low_complexity Low_complexity 1 178 0 18624 169 28 9 chr2 32069919 32071645 -218616209 + L1MA2 LINE L1 1705 3531 -4034 8975 131 43 21 chr2 32071646 32073335 -218614519 - MER52-int LTR ERV1 -2502 5035 3310 4087 139 16 27 chr2 32073341 32074491 -218613363 - MER52-int LTR ERV1 -4004 1451 632 320 250 0 13 chr2 32074491 32074567 -218613287 - MER52-int LTR ERV1 -3548 3657 3583 4386 204 39 46 chr2 32074583 32075729 -218612125 - MER52-int LTR ERV1 -436 4781 411 2634 169 97 12 chr2 32075945 32076842 -218611012 - LTR28 LTR ERV1 0 1020 1 13726 158 11 16 chr2 32076842 32080764 -218607090 + L1MA2 LINE L1 3823 7723 0 371 280 34 42 chr2 32081090 32081235 -218606619 - MIR SINE MIR -62 146 6 548 296 133 4 chr2 32081746 32081915 -218605939 - L2 LINE L2 -470 2844 2637 378 0 0 0 chr2 32081915 32081957 -218605897 + (TG)n Simple_repeat Simple_repeat 2 43 0 548 296 133 4 chr2 32081957 32082013 -218605841 - L2 LINE L2 -677 2637 2590 1241 219 72 42 chr2 32082022 32082469 -218605385 + MLT1C LTR MaLR 6 465 -2 1532 214 76 7 chr2 32082472 32082937 -218604917 - MLT1F LTR MaLR 0 542 1 1892 285 282 18 chr2 32082937 32084261 -218603593 - L2 LINE L2 -721 2593 921 949 221 28 9 chr2 32084356 32084573 -218603281 + MER58A DNA MER1_type 1 221 -3 534 154 115 0 chr2 32084779 32084883 -218602971 + FLAM_A SINE Alu 22 137 -5 849 186 9 38 chr2 32084907 32085117 -218602737 - MER96B DNA MER1_type? 0 417 214 2514 103 31 14 chr2 32086245 32086603 -218601251 + THE1B LTR MaLR 1 364 0 2077 94 0 0 chr2 32087014 32087289 -218600565 - AluY SINE Alu -6 305 31 761 313 63 0 chr2 32087428 32087696 -218600158 + HERVL LTR ERVL 2996 3280 -2374 1594 339 79 20 chr2 32087917 32088971 -218598883 - ERVL LTR ERVL -3264 2500 1348 2272 123 3 0 chr2 32088971 32089281 -218598573 - AluSx SINE Alu -1 311 1 1594 339 79 20 chr2 32089281 32089573 -218598281 - ERVL LTR ERVL -4416 1348 1075 377 235 17 62 chr2 32089597 32089776 -218598078 - LTR33A LTR ERVL 0 523 353 2093 158 31 21 chr2 32089776 32089929 -218597925 - MLT1B LTR MaLR 0 390 240 2116 193 68 36 chr2 32089929 32090431 -218597423 - MLT2B1 LTR ERVL 0 520 3 2093 158 31 21 chr2 32090431 32090662 -218597192 - MLT1B LTR MaLR -150 240 2 228 329 49 0 chr2 32090995 32091138 -218596716 - LTR33A LTR ERVL -371 152 3 548 326 42 34 chr2 32091153 32091392 -218596462 - L2 LINE L2 -266 3047 2807 385 257 22 52 chr2 32091408 32091544 -218596310 + MER94 DNA DNA 3 134 0 833 252 77 15 chr2 32091544 32091818 -218596036 - L2 LINE L2 -513 2801 2511 1285 313 47 27 chr2 32091836 32092433 -218595421 + L2 LINE L2 2115 2723 -591 247 285 99 29 chr2 32094557 32094729 -218593125 - L2 LINE L2 -1152 2162 1979 859 230 75 5 chr2 32094754 32094954 -218592900 + MLT1F1 LTR MaLR 354 567 0 261 302 94 55 chr2 32094955 32095190 -218592664 - L2 LINE L2 -1427 1887 1644 474 350 63 5 chr2 32096680 32096903 -218590951 - MIR SINE MIR -26 236 1 15638 173 14 10 chr2 32097457 32104734 -218583120 - L1PA14 LINE L1 -11 7588 11 619 234 8 8 chr2 32104764 32104892 -218582962 - FLAM_C SINE Alu -4 129 2 1045 305 100 56 chr2 32104932 32106064 -218581790 - L1 LINE L1 -1131 5015 3833 2165 134 3 6 chr2 32106431 32106744 -218581110 - AluSx SINE Alu 0 312 1 2129 130 0 0 chr2 32106753 32107045 -218580809 - AluSg SINE Alu -18 292 1 23 33 0 0 chr2 32107087 32107117 -218580737 + AT_rich Low_complexity Low_complexity 1 30 0 7685 92 21 36 chr2 32107201 32110503 -218577351 + L1PA6 LINE L1 12 3176 -2978 3709 88 2 0 chr2 32110503 32110967 -218576887 + L1PA5 LINE L1 5688 6153 -1 7685 92 21 36 chr2 32110967 32113900 -218573954 + L1PA6 LINE L1 3176 6152 -2 335 234 170 14 chr2 32113906 32114047 -218573807 - L1 LINE L1 -2867 3279 3117 889 222 106 71 chr2 32114048 32114427 -218573427 + L1ME2 LINE L1 5668 6059 -105 306 103 0 0 chr2 32114427 32114466 -218573388 - THE1A LTR MaLR -2 353 315 44368 42 11 1 chr2 32114466 32120556 -218567298 + L1PA4 LINE L1 5 6153 -2 21 0 0 0 chr2 32120972 32120993 -218566861 + AT_rich Low_complexity Low_complexity 1 21 0 1630 228 1 6 chr2 32122040 32122767 -218565087 + L1PA3 LINE L1 5432 6155 0 2273 96 29 44 chr2 32122798 32123142 -218564712 - THE1B LTR MaLR -25 339 1 549 200 9 0 chr2 32123142 32123247 -218564607 + L1ME1 LINE L1 6055 6160 -6 1713 213 64 7 chr2 32123258 32123666 -218564188 + L1ME2 LINE L1 5428 5858 -306 1193 189 13 17 chr2 32125870 32126108 -218561746 - MER96B DNA MER1_type? -17 400 164 500 283 27 33 chr2 32126552 32126736 -218561118 + L1ME1 LINE L1 346 528 -5868 2091 257 66 61 chr2 32126750 32128298 -218559556 + L1ME1 LINE L1 1273 2848 -3558 1106 141 20 0 chr2 32128312 32128567 -218559287 - L1M2 LINE L1 -743 5403 5190 6353 237 40 39 chr2 32128594 32129384 -218558470 + L1ME1 LINE L1 3420 4207 -2219 233 57 29 0 chr2 32129384 32129419 -218558435 + (CA)n Simple_repeat Simple_repeat 1 36 0 6353 237 40 39 chr2 32129419 32130691 -218557163 + L1ME1 LINE L1 4207 5552 -874 1552 169 61 4 chr2 32130691 32130970 -218556884 + AluJo SINE Alu 7 301 -11 6353 237 40 39 chr2 32130970 32131609 -218556245 + L1ME1 LINE L1 5552 6188 -238 7742 124 54 14 chr2 32131625 32132871 -218554983 - HSMAR2 DNA Mariner -4 1298 4 601 276 41 0 chr2 32132887 32133097 -218554757 + L1ME1 LINE L1 6217 6594 0 306 287 108 23 chr2 32133678 32133807 -218554047 - L3 LINE CR1 -11 1566 1427 2388 137 129 3 chr2 32134373 32134753 -218553101 - MSTA LTR MaLR 0 428 1 267 54 0 0 chr2 32134930 32134967 -218552887 + (TG)n Simple_repeat Simple_repeat 2 38 0 2465 69 0 7 chr2 32134989 32135292 -218552562 - AluY SINE Alu -10 301 1 1480 261 55 23 chr2 32135787 32136519 -218551335 - L2 LINE L2 -13 3300 2554 1648 242 90 35 chr2 32137320 32138011 -218549843 - L1MCc LINE L1 -4888 1535 964 516 204 10 10 chr2 32138011 32138114 -218549740 - MER81 DNA DNA -6 108 6 268 255 53 11 chr2 32138119 32138213 -218549641 - L1MCc LINE L1 -6070 353 256 374 289 56 52 chr2 32138266 32138515 -218549339 - L1MCc LINE L1 -5525 898 649 1133 99 3 2 chr2 32138862 32139166 -218548688 + THE1A LTR MaLR 1 355 0 12318 99 11 0 chr2 32139166 32140726 -218547128 + THE1A-int LTR MaLR 1 1578 -2 2752 52 86 0 chr2 32140728 32141055 -218546799 + THE1A LTR MaLR 1 355 0 270 253 12 12 chr2 32141083 32141166 -218546688 - L1MCc LINE L1 -5968 455 373 542 250 0 0 chr2 32141172 32141284 -218546570 - MER81 DNA DNA 0 114 3 982 257 109 3 chr2 32141286 32141590 -218546264 - L1MCc LINE L1 -6070 353 18 339 280 120 0 chr2 32143759 32143884 -218543970 + MIR3 SINE MIR 62 201 -7 564 273 60 28 chr2 32145222 32145438 -218542416 - Charlie8 DNA MER1_type -2194 223 1 690 183 13 20 chr2 32146748 32146901 -218540953 + L1MB4 LINE L1 6029 6180 0 2076 201 25 38 chr2 32147042 32147515 -218540339 + MLT1C LTR MaLR 1 467 0 198 182 57 125 chr2 32148754 32148795 -218539059 - MER5B DNA MER1_type 0 178 144 1786 149 14 4 chr2 32148795 32149109 -218538745 + AluSx SINE Alu 1 317 0 198 182 57 125 chr2 32149109 32149154 -218538700 - MER5B DNA MER1_type -34 144 97 527 273 125 55 chr2 32152179 32152596 -218535258 + MLT1L LTR MaLR 170 615 0 342 0 0 0 chr2 32152670 32152708 -218535146 + (CA)n Simple_repeat Simple_repeat 1 38 0 294 241 11 11 chr2 32152708 32152795 -218535059 - L1MC4a LINE L1 -1879 5929 5843 832 292 35 36 chr2 32153156 32153269 -218534585 - L2 LINE L2 -243 3070 2958 1325 136 63 23 chr2 32153269 32153490 -218534364 - MER30 DNA MER1_type 0 230 1 832 292 35 36 chr2 32153490 32153905 -218533949 - L2 LINE L2 -355 2958 2542 24 32 0 0 chr2 32154294 32154325 -218533529 + AT_rich Low_complexity Low_complexity 1 31 0 230 342 13 26 chr2 32154452 32154528 -218533326 - MIR SINE MIR -102 106 32 183 246 0 0 chr2 32154900 32154957 -218532897 + (CA)n Simple_repeat Simple_repeat 2 58 0 2385 95 0 0 chr2 32155332 32155628 -218532226 - AluSg SINE Alu -14 296 1 240 299 276 0 chr2 32156177 32156311 -218531543 + MIR SINE MIR 12 182 -80 649 220 126 27 chr2 32156547 32156901 -218530953 - MLT1J2 LTR MaLR 0 450 20 3067 267 102 29 chr2 32157566 32158014 -218529840 + L2 LINE L2 1712 2126 -1188 1045 201 115 75 chr2 32158014 32158362 -218529492 + MLT1A1 LTR MaLR 4 365 0 3067 267 102 29 chr2 32158362 32159008 -218528846 + L2 LINE L2 2126 2886 -428 713 286 97 24 chr2 32158987 32159277 -218528577 + L2 LINE L2 3001 3311 -2 * 2581 264 64 24 chr2 32159356 32160290 -218527564 + L1MDa LINE L1 19 1139 -5401 1260 181 53 51 chr2 32160288 32160775 -218527079 + L1MDa LINE L1 2163 2650 -3890 * 5049 157 9 34 chr2 32160848 32161830 -218526024 + L1M4c LINE L1 17 974 -5410 3539 191 42 14 chr2 32161811 32162524 -218525330 + L1MB3 LINE L1 12 744 -6821 * 532 124 11 0 chr2 32162525 32162614 -218525240 + L1MA3 LINE L1 6214 6303 -2 993 193 15 20 chr2 32162620 32162839 -218525015 + AluJo SINE Alu 87 304 0 6233 214 83 27 chr2 32162839 32166679 -218521175 + L1MB3 LINE L1 2136 5761 -1804 2515 159 9 2 chr2 32166679 32167120 -218520734 + L1PA16 LINE L1 5723 6166 0 2232 91 0 3 chr2 32167123 32167445 -218520409 + AluSp SINE Alu 1 321 0 6233 214 83 27 chr2 32167445 32167535 -218520319 + L1MB3 LINE L1 5762 6290 -1275 368 141 16 0 chr2 32167535 32167599 -218520255 + MLT2B3 LTR ERVL 1 65 -489 1740 175 70 96 chr2 32167701 32168147 -218519707 + MLT2B3 LTR ERVL 75 508 -46 255 93 0 0 chr2 32168171 32168214 -218519640 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 299 161 0 0 chr2 32168223 32168279 -218519575 + MLT2B3 LTR ERVL 465 520 0 4093 173 56 13 chr2 32168279 32169390 -218518464 + L1MB3 LINE L1 6286 7451 -151 1981 113 0 0 chr2 32169390 32169704 -218518150 - AluY SINE Alu 0 330 17 4093 173 56 13 chr2 32169704 32169861 -218517993 + L1MB3 LINE L1 7451 7600 -2 1587 262 25 21 chr2 32169879 32170490 -218517364 + L1MC/D LINE L1 2315 2927 -3219 3047 245 80 36 chr2 32170560 32171659 -218516195 + L1MC/D LINE L1 3505 4674 -1472 1799 181 16 11 chr2 32171659 32172023 -218515831 - MER47A DNA MER2_type 0 366 1 3047 245 80 36 chr2 32172023 32172264 -218515590 + L1MC/D LINE L1 4674 4903 -1243 532 203 8 0 chr2 32172269 32172392 -218515462 + L1MC/D LINE L1 5052 5175 -971 686 299 55 30 chr2 32172395 32172759 -218515095 + L1M3c LINE L1 523 895 -5768 2527 252 21 13 chr2 32172875 32173962 -218513892 + L1M3c LINE L1 1287 2360 -4373 230 192 0 0 chr2 32173966 32174018 -218513836 + L1MC/D LINE L1 5774 5825 -417 519 17 0 0 chr2 32175233 32175293 -218512561 + (TG)n Simple_repeat Simple_repeat 2 61 0 300 308 19 28 chr2 32175304 32175411 -218512443 - MIR SINE MIR -127 135 30 442 280 101 31 chr2 32175812 32176069 -218511785 + MLT1K LTR MaLR 311 585 -3 741 200 8 0 chr2 32176133 32176263 -218511591 + FLAM_A SINE Alu 1 131 -2 1160 224 135 70 chr2 32176637 32177111 -218510743 + MLT1D LTR MaLR 1 505 0 1181 238 24 4 chr2 32177192 32177444 -218510410 - MIR SINE MIR -4 258 2 314 281 34 34 chr2 32177461 32177639 -218510215 + MER5B DNA MER1_type 1 178 0 1411 194 30 33 chr2 32178605 32178966 -218508888 - MLT1C LTR MaLR -1 466 107 307 263 26 0 chr2 32178966 32179042 -218508812 + Tigger3(Golem) DNA MER2_type 1 78 -2951 * 1244 166 0 0 chr2 32179034 32179245 -218508609 + Tigger3(Golem) DNA MER2_type 2816 3026 -3 369 180 135 0 chr2 32179245 32179329 -218508525 - MLT1C LTR MaLR -366 101 6 396 0 0 0 chr2 32180145 32180189 -218507665 + (CA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr2 32182100 32182121 -218505733 + AT_rich Low_complexity Low_complexity 1 21 0 1494 120 52 4 chr2 32182555 32182822 -218505032 - L1MA3 LINE L1 -2 6303 6024 1204 122 11 0 chr2 32182943 32183132 -218504722 + L1PA16 LINE L1 5954 6144 -22 3420 263 93 18 chr2 32183634 32185157 -218502697 + L1ME LINE L1 37 1672 -4724 2983 247 38 34 chr2 32185158 32186862 -218500992 + L1ME LINE L1 1724 3411 -2804 315 305 45 32 chr2 32187379 32187533 -218500321 - L1ME LINE L1 -328 5793 5638 216 0 0 0 chr2 32187742 32187766 -218500088 + (TG)n Simple_repeat Simple_repeat 2 25 0 435 245 12 20 chr2 32187833 32188059 -218499795 - L1ME1 LINE L1 -105 6061 5678 3925 177 55 25 chr2 32188059 32189534 -218498320 - MER52A LTR ERV1 0 1755 1 1609 211 25 0 chr2 32189534 32189889 -218497965 - L1ME1 LINE L1 -488 5678 5315 1069 186 30 89 chr2 32189895 32190233 -218497621 + L1ME LINE L1 4934 5251 -964 9535 159 33 1 chr2 32190237 32192763 -218495091 + L1PA15 LINE L1 3540 6144 -21 635 163 14 7 chr2 32192778 32192919 -218494935 + L1ME LINE L1 5243 5384 -831 263 309 159 0 chr2 32193476 32193602 -218494252 + MIR SINE MIR 111 256 -6 328 291 45 8 chr2 32194592 32194726 -218493128 + MIR3 SINE MIR 1 139 -69 972 207 140 0 chr2 32195127 32195320 -218492534 + MER58A DNA MER1_type 2 221 -3 204 282 214 0 chr2 32195581 32195712 -218492142 + MIR3 SINE MIR 19 177 -31 294 288 0 99 chr2 32195773 32195884 -218491970 - L2 LINE L2 -181 3091 2992 7284 26 0 0 chr2 32196307 32197467 -218490387 + L1HS LINE L1 4994 6153 -2 180 0 0 0 chr2 32197471 32197491 -218490363 + (A)n Simple_repeat Simple_repeat 1 20 0 412 256 41 8 chr2 32197721 32197842 -218490012 - L2 LINE L2 0 3313 3189 255 209 127 18 chr2 32198108 32198218 -218489636 + L1ME LINE L1 5655 5776 -414 40 59 0 0 chr2 32198529 32198597 -218489257 + AT_rich Low_complexity Low_complexity 1 68 0 642 276 82 30 chr2 32198633 32198865 -218488989 + MIR SINE MIR 1 244 -18 200 194 0 0 chr2 32199433 32199469 -218488385 + L2 LINE L2 3233 3268 -4 285 331 69 0 chr2 32199899 32200029 -218487825 + MIR SINE MIR 76 214 -48 21 0 0 0 chr2 32200758 32200779 -218487075 + GC_rich Low_complexity Low_complexity 1 21 0 221 348 69 29 chr2 32202881 32203085 -218484769 + L2 LINE L2 2191 2402 -912 468 264 135 16 chr2 32203567 32203760 -218484094 - MLT1H LTR MaLR -320 229 14 432 243 79 7 chr2 32203767 32203919 -218483935 - L1ME3A LINE L1 -19 6151 5989 342 115 0 0 chr2 32203922 32203983 -218483871 + (A)n Simple_repeat Simple_repeat 1 61 0 472 184 0 0 chr2 32203984 32204071 -218483783 - L1ME3A LINE L1 -190 5980 5894 1716 199 45 13 chr2 32204118 32204514 -218483340 - MER74A LTR ERVL -70 488 80 253 263 105 13 chr2 32204588 32204740 -218483114 + L1MEc LINE L1 660 825 -5571 559 282 62 46 chr2 32204746 32205051 -218482803 - MER21B LTR ERV1 -153 710 401 15294 159 69 20 chr2 32205051 32206332 -218481522 + L1M1 LINE L1 27 1244 -6321 1192 82 18 6 chr2 32206332 32206528 -218481326 - L1PB1 LINE L1 0 6151 5980 15294 159 69 20 chr2 32206528 32207329 -218480525 + L1M1 LINE L1 1244 2004 -5561 6467 72 10 12 chr2 32207329 32208221 -218479633 + L1PA8 LINE L1 5270 6159 -13 15294 159 69 20 chr2 32208221 32209146 -218478708 + L1M1 LINE L1 2004 3183 -4382 2444 106 21 5 chr2 32209153 32209531 -218478323 + L1PB1 LINE L1 1 384 -6479 3590 150 21 38 chr2 32209898 32210612 -218477242 + L1PB1 LINE L1 397 1098 -5765 1097 41 14 0 chr2 32210606 32210752 -218477102 - L1PA4 LINE L1 -1613 4533 4386 * 7229 48 2 1 chr2 32210752 32212406 -218475448 + L1PA4 LINE L1 4502 6154 -1 12910 195 24 11 chr2 32212477 32213229 -218474625 + L1PB1 LINE L1 1084 1825 -5042 3000 31 0 0 chr2 32213229 32213581 -218474273 + L1PA3 LINE L1 5804 6155 0 12910 195 24 11 chr2 32213581 32216442 -218471412 + L1PB1 LINE L1 1825 4847 -2020 1784 128 88 0 chr2 32216442 32216715 -218471139 + AluSg SINE Alu 6 302 -8 12910 195 24 11 chr2 32216715 32218758 -218469096 + L1PB1 LINE L1 4847 6862 -5 4008 180 47 9 chr2 32218759 32220135 -218467719 + L1MA2 LINE L1 3168 4600 -2965 4579 134 16 6 chr2 32220137 32220930 -218466924 - L1PA13 LINE L1 0 6163 5363 8399 147 18 17 chr2 32220930 32221303 -218466551 + L1MA2 LINE L1 4968 5339 -2384 12728 150 32 2 chr2 32221303 32224372 -218463482 + L1PA11 LINE L1 3060 6165 -9 8399 147 18 17 chr2 32224372 32226741 -218461113 + L1MA2 LINE L1 5339 7714 -9 690 231 60 112 chr2 32226741 32227088 -218460766 - MER77 LTR ERV1 -113 492 164 841 188 6 0 chr2 32227094 32227254 -218460600 - MLT1C LTR MaLR -2 465 305 439 224 135 26 chr2 32227272 32227428 -218460426 + L1M4 LINE L1 1145 1317 -5099 921 291 92 38 chr2 32227502 32228083 -218459771 + L1M4 LINE L1 1262 1810 -4797 1525 192 50 33 chr2 32228083 32228442 -218459412 + MLT1A1 LTR MaLR 1 365 0 921 291 92 38 chr2 32228442 32228760 -218459094 + L1M4 LINE L1 1810 2398 -4209 3327 216 86 18 chr2 32228777 32229151 -218458703 + L1M4 LINE L1 4458 4805 -1621 1336 245 35 30 chr2 32229151 32229522 -218458332 + MLT1A2 LTR MaLR 2 374 0 3327 216 86 18 chr2 32229522 32230226 -218457628 + L1M4 LINE L1 4805 5610 -816 3982 179 51 12 chr2 32230226 32231132 -218456722 + L1MA7 LINE L1 3387 4327 -1819 2250 112 0 10 chr2 32231134 32231446 -218456408 + AluSx SINE Alu 2 310 -2 630 267 155 0 chr2 32231452 32231658 -218456196 + MLT1G1 LTR MaLR 358 595 0 1844 199 72 33 chr2 32231661 32232303 -218455551 + L1ME2 LINE L1 5150 5819 -345 1897 167 3 19 chr2 32232303 32232620 -218455234 + AluSx SINE Alu 1 312 0 1844 199 72 33 chr2 32232620 32232651 -218455203 + L1ME2 LINE L1 5819 5847 -317 * 4971 174 16 7 chr2 32232640 32233980 -218453874 + L1MA7 LINE L1 4299 5650 -662 2140 140 28 8 chr2 32233980 32234337 -218453517 - THE1B LTR MaLR 0 364 1 5171 123 5 1 chr2 32234337 32235108 -218452746 - THE1B-int LTR MaLR 0 1580 807 2035 136 32 46 chr2 32235111 32235480 -218452374 + THE1B LTR MaLR 1 364 0 7526 165 50 65 chr2 32235482 32237157 -218450697 + THE1B-int LTR MaLR 3 1651 0 2172 128 36 28 chr2 32237160 32237519 -218450335 + THE1B LTR MaLR 3 364 0 4702 130 58 1 chr2 32237519 32238279 -218449575 - THE1B-int LTR MaLR -772 808 6 2196 152 22 0 chr2 32238284 32238640 -218449214 - THE1B LTR MaLR 0 364 1 3029 175 20 17 chr2 32238641 32239280 -218448574 + L1MA7 LINE L1 5647 6287 -4 1843 172 15 0 chr2 32239297 32239623 -218448231 + L1M4 LINE L1 5600 5930 -534 * 3718 112 5 1 chr2 32239615 32240410 -218447444 - L1P4 LINE L1 -381 5787 4990 2559 131 5 5 chr2 32240409 32240838 -218447016 + L1P LINE L1 3906 4334 -1812 * 525 93 27 0 chr2 32240846 32240921 -218446933 + Tigger1 DNA MER2_type 2341 2417 -1 28 0 0 0 chr2 32241104 32241132 -218446722 + AT_rich Low_complexity Low_complexity 1 28 0 322 113 0 16 chr2 32241132 32241194 -218446660 + L1MD2 LINE L1 6296 6356 -3 220 113 38 62 chr2 32241223 32241303 -218446551 + (TATAA)n Simple_repeat Simple_repeat 4 81 0 2467 201 39 15 chr2 32241332 32241919 -218445935 - L1MD1 LINE L1 0 6242 5642 276 30 0 0 chr2 32241923 32241956 -218445898 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1598 174 0 39 chr2 32241958 32242239 -218445615 - AluJo SINE Alu -31 281 12 3156 103 17 4 chr2 32242268 32242732 -218445122 - L1PA11 LINE L1 -2 6172 5703 6659 119 28 7 chr2 32242732 32243759 -218444095 - HSMAR1 DNA Mariner -232 1055 7 704 223 0 11 chr2 32243760 32243935 -218443919 - L1P3 LINE L1 -5003 1458 1286 7645 217 132 5 chr2 32243944 32244401 -218443453 - L1P LINE L1 -2028 4118 3720 1554 96 44 4 chr2 32244401 32244651 -218443203 - L1MA2 LINE L1 0 6304 6045 7645 217 132 5 chr2 32244651 32244676 -218443178 - L1P LINE L1 -2426 3720 3700 15701 69 3 1 chr2 32244676 32247522 -218440332 - L1PA6 LINE L1 -5 6149 3296 7645 217 132 5 chr2 32247522 32247741 -218440113 - L1P LINE L1 -2446 3700 3510 216 0 0 0 chr2 32247741 32247765 -218440089 + (TG)n Simple_repeat Simple_repeat 2 25 0 7645 217 132 5 chr2 32247765 32249289 -218438565 - L1P LINE L1 -2636 3510 1609 1512 93 98 0 chr2 32249461 32249686 -218438168 + LTR17 LTR ERV1 534 780 0 5344 75 0 17 chr2 32249686 32250405 -218437449 + HERV17 LTR ERV1 1 707 -7919 9092 70 9 8 chr2 32250581 32251844 -218436010 + HERV17 LTR ERV1 750 2014 -6612 * 10258 57 2 1 chr2 32251829 32253153 -218434701 + HERV17 LTR ERV1 2430 3754 -4872 4771 49 5 2 chr2 32253132 32253745 -218434109 + HERV17 LTR ERV1 5405 6019 -2607 * 2342 62 3 0 chr2 32253763 32254054 -218433800 + HERV17 LTR ERV1 8335 8626 0 2336 59 0 98 chr2 32254058 32254209 -218433645 + LTR17 LTR ERV1 5 103 -677 428 19 0 0 chr2 32254209 32254261 -218433593 + L1PA6 LINE L1 6098 6149 -5 2336 59 0 98 chr2 32254261 32254466 -218433388 + LTR17 LTR ERV1 103 326 -454 797 281 37 39 chr2 32254467 32254848 -218433006 + L1ME2 LINE L1 1022 1401 -5025 357 183 10 7 chr2 32254873 32254971 -218432883 - L1MB3 LINE L1 0 6180 6086 6317 197 43 87 chr2 32254976 32257658 -218430196 - L1MA4 LINE L1 -280 6202 3403 924 237 82 109 chr2 32257658 32258085 -218429769 + MER66A LTR ERV1 93 468 -10 6317 197 43 87 chr2 32258085 32261511 -218426343 - L1MA4 LINE L1 -3079 3403 5 724 291 93 0 chr2 32261532 32261834 -218426020 + L1ME2 LINE L1 1639 1968 -4639 755 224 18 14 chr2 32261863 32262082 -218425772 + L1ME2 LINE L1 4009 4228 -2198 1883 231 30 8 chr2 32262102 32262635 -218425219 + L1ME2 LINE L1 4809 5353 -1073 1760 226 41 37 chr2 32262645 32263492 -218424362 + L1ME2 LINE L1 5516 6434 -10 1978 225 85 52 chr2 32263513 32264705 -218423149 + L1MC4 LINE L1 6374 7700 -342 1613 145 128 0 chr2 32264705 32265001 -218422853 - MER1B DNA MER1_type -3 334 1 1978 225 85 52 chr2 32265001 32265208 -218422646 + L1MC4 LINE L1 7700 7899 -143 1731 72 72 11 chr2 32265493 32265757 -218422097 + L1MA1 LINE L1 6023 6302 0 261 250 77 29 chr2 32265943 32266047 -218421807 + MIR SINE MIR 154 262 0 231 36 0 0 chr2 32266473 32266501 -218421353 + (CA)n Simple_repeat Simple_repeat 1 28 0 890 291 77 24 chr2 32266660 32266997 -218420857 - MLT1J LTR MaLR -154 357 3 240 35 0 0 chr2 32267131 32267160 -218420694 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1886 157 7 0 chr2 32267172 32267478 -218420376 + AluSx SINE Alu 1 308 0 499 211 0 0 chr2 32267582 32267672 -218420182 - MER5A DNA MER1_type -84 105 16 677 298 145 31 chr2 32267962 32268418 -218419436 - L1MC4a LINE L1 -94 6027 5520 22 0 0 0 chr2 32269751 32269773 -218418081 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 32269857 32269883 -218417971 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr2 32270985 32271019 -218416835 + AT_rich Low_complexity Low_complexity 1 34 0 1656 166 53 0 chr2 32272279 32272563 -218415291 - AluJb SINE Alu -13 299 1 228 214 48 87 chr2 32272818 32272921 -218414933 + HAL1 LINE L1 980 1078 -1429 857 229 147 50 chr2 32273179 32273580 -218414274 + LTR50 LTR ERVL 100 539 -256 485 292 52 21 chr2 32273596 32273788 -218414066 + LTR50 LTR ERVL 475 672 -123 2308 91 3 0 chr2 32273969 32274266 -218413588 - AluSq SINE Alu -15 298 1 29 28 0 0 chr2 32274918 32274954 -218412900 + AT_rich Low_complexity Low_complexity 1 36 0 2211 118 3 6 chr2 32275394 32275708 -218412146 - AluSq SINE Alu 0 313 1 463 299 15 8 chr2 32276578 32276712 -218411142 + L2 LINE L2 2004 2138 -1176 838 236 66 43 chr2 32276716 32277121 -218410733 + MLT1A1 LTR MaLR 10 362 -3 1917 218 31 56 chr2 32277124 32277643 -218410211 + L1MC3 LINE L1 7279 7784 -1 703 201 67 12 chr2 32277702 32277866 -218409988 - FRAM SINE Alu -7 169 1 8375 193 35 4 chr2 32278393 32280136 -218407718 + L1P LINE L1 2840 4636 -1510 517 261 85 46 chr2 32280160 32280420 -218407434 - L1MEc LINE L1 -5141 1255 986 1462 238 5 57 chr2 32280478 32280759 -218407095 + L1MC1 LINE L1 5407 5658 -2150 1587 121 12 8 chr2 32280759 32281007 -218406847 + L1MC1 LINE L1 6071 6319 -14 1462 238 5 57 chr2 32281007 32281162 -218406692 + L1MC1 LINE L1 5658 5820 -1988 735 218 29 12 chr2 32281162 32281332 -218406522 - HERVL40 LTR ERVL -2142 3388 3216 * 1465 238 47 31 chr2 32281305 32281688 -218406166 - HERVL40 LTR ERVL -2449 3081 2693 993 192 47 19 chr2 32281688 32281902 -218405952 - LTR40a LTR ERVL -293 226 7 706 283 83 21 chr2 32281907 32282575 -218405279 - L1M4c LINE L1 -4940 2198 1317 1592 184 54 4 chr2 32282634 32282911 -218404943 - AluJb SINE Alu -19 293 3 1279 212 128 43 chr2 32283305 32283938 -218403916 + Zaphod DNA AcHobo 284 970 -3061 7053 31 0 0 chr2 32283938 32284776 -218403078 + L1PA4 LINE L1 5318 6155 0 1088 209 58 4 chr2 32284814 32285091 -218402763 + Zaphod DNA AcHobo 3595 3886 -145 1549 218 47 67 chr2 32285093 32285689 -218402165 + MER82 DNA MER2_type 2 653 0 568 203 20 59 chr2 32285689 32285720 -218402134 + MER115 DNA AcHobo 548 579 -114 1665 201 13 0 chr2 32285720 32286028 -218401826 + AluJb SINE Alu 1 312 0 568 203 20 59 chr2 32286028 32286148 -218401706 + MER115 DNA AcHobo 579 693 0 22 35 0 0 chr2 32287089 32287118 -218400736 + AT_rich Low_complexity Low_complexity 1 29 0 2522 89 65 8 chr2 32287685 32288057 -218399797 + MLT2A1 LTR ERVL 1 393 -51 14473 203 35 21 chr2 32289417 32297048 -218390806 - L1PB3 LINE L1 -2 6868 70 * 34503 104 28 9 chr2 32297033 32299944 -218387910 - L1P LINE L1 -823 5323 2269 210 37 0 0 chr2 32299944 32299971 -218387883 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 34503 104 28 9 chr2 32299971 32302274 -218385580 - L1P LINE L1 -3877 2269 11 3343 147 28 7 chr2 32302282 32302887 -218384967 + L1MA8 LINE L1 5671 6288 -3 21 0 0 0 chr2 32302898 32302919 -218384935 + AT_rich Low_complexity Low_complexity 1 21 0 347 297 55 52 chr2 32303518 32303956 -218383898 - L1MC5 LINE L1 0 8042 7504 451 253 55 33 chr2 32304108 32304290 -218383564 - L1MC4 LINE L1 -547 7495 7310 310 317 29 0 chr2 32304403 32304507 -218383347 - L1MC5 LINE L1 -864 7097 6991 859 221 11 0 chr2 32304587 32304807 -218383047 - L1MC4 LINE L1 -854 7002 6733 231 100 50 0 chr2 32304807 32304847 -218383007 + Tigger2 DNA MER2_type 718 759 -1959 1576 166 8 0 chr2 32304897 32305156 -218382698 + Tigger2 DNA MER2_type 2458 2718 0 209 108 27 0 chr2 32305180 32305217 -218382637 + (TG)n Simple_repeat Simple_repeat 2 39 0 1974 148 25 22 chr2 32305221 32305580 -218382274 - Tigger6a DNA MER2_type -3 1080 721 2038 180 48 137 chr2 32305585 32306257 -218381597 - LTR9 LTR ERV1 0 612 1 1599 170 14 14 chr2 32306259 32306542 -218381312 - HUERS-P3 LTR ERV1 0 8919 8299 14472 127 3 14 chr2 32306736 32308507 -218379347 - HUERS-P3 LTR ERV1 -2007 6912 5165 2517 33 40 0 chr2 32308507 32308806 -218379048 - AluY SINE Alu 0 311 1 14472 127 3 14 chr2 32308806 32309121 -218378733 - HUERS-P3 LTR ERV1 -3754 5165 4848 * 19974 126 4 7 chr2 32309104 32311930 -218375924 - HUERS-P3 LTR ERV1 -4313 4606 1791 4409 194 53 9 chr2 32311927 32312979 -218374875 - HUERS-P3 LTR ERV1 -7267 1652 473 * 592 247 105 27 chr2 32312993 32313212 -218374642 - LTR19C LTR ERV1 -53 726 491 * 1618 208 7 85 chr2 32313195 32313619 -218374235 - LTR9 LTR ERV1 -221 391 1 2504 175 97 6 chr2 32313628 32314102 -218373752 - Tigger6a DNA MER2_type -566 517 1 2853 269 14 38 chr2 32315612 32316095 -218371759 + L1M3b LINE L1 10 470 -5811 2699 40 0 0 chr2 32316095 32316396 -218371458 - AluY SINE Alu -10 301 1 2853 269 14 38 chr2 32316396 32316682 -218371172 + L1M3b LINE L1 470 761 -5520 * 9765 221 44 27 chr2 32316668 32319132 -218368722 + L1M3b LINE L1 630 3049 -3301 2040 122 3 33 chr2 32319132 32319436 -218368418 + AluSq SINE Alu 1 295 -18 9765 221 44 27 chr2 32319436 32320876 -218366978 + L1M3b LINE L1 3049 4294 -2056 3048 134 9 0 chr2 32320876 32321300 -218366554 + MSTA LTR MaLR 1 428 0 9765 221 44 27 chr2 32321300 32321425 -218366429 + L1M3b LINE L1 4294 4415 -1935 195 258 61 30 chr2 32322409 32322475 -218365379 - L2 LINE L2 -44 3269 3202 401 336 7 7 chr2 32323242 32323379 -218364475 + MIR3 SINE MIR 10 146 -62 399 315 51 17 chr2 32323457 32323635 -218364219 + MIR SINE MIR 57 240 -22 231 311 66 28 chr2 32323847 32323953 -218363901 - MER5A DNA MER1_type -22 167 58 691 266 133 4 chr2 32325396 32325435 -218362419 - LTR16B LTR ERVL -9 455 422 2209 122 0 0 chr2 32325435 32325730 -218362124 + AluSx SINE Alu 1 295 -17 691 266 133 4 chr2 32325730 32325953 -218361901 - LTR16B LTR ERVL -42 422 159 461 238 0 16 chr2 32327755 32327881 -218359973 - L1M4 LINE L1 -1559 4587 4464 * 466 285 28 16 chr2 32327849 32328065 -218359789 + L1ME3A LINE L1 5669 5883 -285 21889 152 32 14 chr2 32328844 32329248 -218358606 + L1M1 LINE L1 16 411 -7154 2271 23 27 8 chr2 32329248 32329509 -218358345 - L1PA5 LINE L1 0 6154 5889 21889 152 32 14 chr2 32329509 32332529 -218355325 + L1M1 LINE L1 411 3523 -4042 405 0 0 0 chr2 32332529 32332574 -218355280 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 21889 152 32 14 chr2 32332574 32333098 -218354756 + L1M1 LINE L1 3523 4036 -3529 9434 188 19 20 chr2 32333100 32334495 -218353359 + L1 LINE L1 3790 5186 -2379 2191 83 0 10 chr2 32334495 32334783 -218353071 + AluY SINE Alu 26 310 -1 9434 188 19 20 chr2 32334783 32335343 -218352511 + L1 LINE L1 5186 5745 -1820 1686 166 0 28 chr2 32335343 32335660 -218352194 + AluJb SINE Alu 1 309 0 9434 188 19 20 chr2 32335660 32335700 -218352154 + L1 LINE L1 5745 5784 -1781 23320 164 21 19 chr2 32335704 32341953 -218345901 + L1PA8 LINE L1 1 7606 -4 295 160 40 0 chr2 32341954 32342004 -218345850 + LTR8 LTR ERV1 533 584 -107 27 73 0 0 chr2 32342004 32342059 -218345795 + AT_rich Low_complexity Low_complexity 1 55 0 189 171 0 0 chr2 32342968 32343003 -218344851 + A-rich Low_complexity Low_complexity 1 35 0 2190 84 7 29 chr2 32343081 32343389 -218344465 + AluY SINE Alu 1 301 -10 410 229 57 0 chr2 32343390 32343512 -218344342 + L1ME4a LINE L1 5756 5884 -237 492 239 11 51 chr2 32343534 32343710 -218344144 + L1MC5 LINE L1 7745 7913 -48 2122 138 24 6 chr2 32343712 32344046 -218343808 + L1PA16 LINE L1 5818 6157 -9 619 261 11 43 chr2 32344479 32344663 -218343191 - MER5B DNA MER1_type 0 178 1 576 206 7 85 chr2 32344682 32344823 -218343031 - MER5B DNA MER1_type 0 178 49 1418 159 58 11 chr2 32345172 32345448 -218342406 + L1MB3 LINE L1 5892 6180 -3 382 298 32 32 chr2 32345981 32346105 -218341749 - MER5A DNA MER1_type 0 189 66 271 341 29 14 chr2 32346009 32346147 -218341707 + MER5A DNA MER1_type 39 178 -11 * 9826 193 57 41 chr2 32346327 32346996 -218340858 + L1MA4 LINE L1 16 673 -6892 396 0 0 0 chr2 32346996 32347040 -218340814 + (CAGTG)n Simple_repeat Simple_repeat 3 46 0 9826 193 57 41 chr2 32347040 32347460 -218340394 + L1MA4 LINE L1 673 1085 -6480 2233 139 30 38 chr2 32347460 32347827 -218340027 - THE1B LTR MaLR 0 364 1 9826 193 57 41 chr2 32347827 32349632 -218338222 + L1MA4 LINE L1 1085 3634 -3931 764 163 30 22 chr2 32349635 32349770 -218338084 + FLAM_C SINE Alu 8 143 0 411 87 22 33 chr2 32349775 32349867 -218337987 + (TA)n Simple_repeat Simple_repeat 1 91 0 5652 197 45 14 chr2 32349867 32351197 -218336657 + L1MA4 LINE L1 3628 4999 -2566 1442 135 12 18 chr2 32351179 32351505 -218336349 + L1MA4 LINE L1 6593 6915 -743 * 3707 30 0 0 chr2 32351505 32351930 -218335924 + L1PA5 LINE L1 5734 6164 0 5284 135 12 4 chr2 32351933 32352748 -218335106 + L1MA4 LINE L1 6892 7713 -6 588 193 207 7 chr2 32352787 32352932 -218334922 + MER5A DNA MER1_type 16 189 0 184 240 20 100 chr2 32352939 32353039 -218334815 - MER5A DNA MER1_type -1 188 97 582 311 70 20 chr2 32353677 32353921 -218333933 - MIR SINE MIR -5 257 2 740 256 51 19 chr2 32355311 32355526 -218332328 + MIR SINE MIR 7 228 -34 183 346 0 0 chr2 32355639 32355691 -218332163 - MER5A DNA MER1_type -115 74 23 405 0 0 0 chr2 32355986 32356031 -218331823 + (CA)n Simple_repeat Simple_repeat 2 46 0 566 250 22 17 chr2 32356791 32356959 -218330895 + MIR SINE MIR 5 176 -32 587 290 157 69 chr2 32357544 32358023 -218329831 - LTR33 LTR ERVL 0 521 1 648 322 83 33 chr2 32358138 32358272 -218329582 - ERVL LTR ERVL -2323 3331 3205 24869 45 4 0 chr2 32358272 32362163 -218325691 - L1PA5 LINE L1 -1 6153 2250 648 322 83 33 chr2 32362163 32362753 -218325101 - ERVL LTR ERVL -2449 3205 2506 827 322 45 20 chr2 32362790 32362948 -218324906 - ERVL LTR ERVL -3424 2269 2116 2046 201 65 92 chr2 32362948 32363591 -218324263 + MLT1E2 LTR MaLR 1 626 0 827 322 45 20 chr2 32363591 32363889 -218323965 - ERVL LTR ERVL -3577 2116 1744 881 124 20 13 chr2 32363988 32364141 -218323713 - MLT1D LTR MaLR 0 505 352 268 286 48 0 chr2 32364389 32364515 -218323339 - ERVL LTR ERVL -5061 593 462 1285 70 0 0 chr2 32364607 32364790 -218323064 - AluY SINE Alu 0 313 131 216 0 0 0 chr2 32364792 32364816 -218323038 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2004 61 0 4 chr2 32364816 32365062 -218322792 - AluY SINE Alu -28 283 39 396 0 0 0 chr2 32366033 32366077 -218321777 + (TG)n Simple_repeat Simple_repeat 2 45 0 335 315 63 8 chr2 32366136 32366263 -218321591 + MLT1I LTR MaLR 36 169 -240 232 200 43 0 chr2 32366393 32366463 -218321391 + MLT1J1 LTR MaLR 347 419 -27 1201 87 6 0 chr2 32366463 32366636 -218321218 + L1MA2 LINE L1 5437 5610 -695 * 11934 88 3 1 chr2 32366634 32368330 -218319524 + L1PA5 LINE L1 1 1701 -4440 19710 40 5 0 chr2 32368330 32371584 -218316270 + L1PA5 LINE L1 2902 6153 -1 584 122 139 0 chr2 32371584 32371699 -218316155 + L1PB4 LINE L1 6025 6155 -1 * 2780 125 11 2 chr2 32371693 32372148 -218315706 + L1MA2 LINE L1 5593 6051 -253 10193 141 16 27 chr2 32372162 32374967 -218312887 + L1P3 LINE L1 6 2801 -3660 5642 110 15 16 chr2 32374966 32375897 -218311957 - L1P LINE L1 -3043 3103 2174 * 1943 116 29 3 chr2 32375896 32376206 -218311648 + MSTA-int LTR MaLR 1334 1651 0 * 1990 144 160 5 chr2 32376206 32376574 -218311280 + MSTA LTR MaLR 1 425 -3 186 348 28 43 chr2 32376602 32376743 -218311111 - L2 LINE L2 -303 2969 2831 2416 97 35 0 chr2 32376790 32377160 -218310694 + L1MA2 LINE L1 5919 6301 -3 216 260 39 26 chr2 32377519 32377596 -218310258 - MIR3 SINE MIR -13 195 118 237 188 29 0 chr2 32378178 32378247 -218309607 - MER69 DNA AcHobo -58 2468 2398 684 206 23 0 chr2 32378249 32378380 -218309474 + FLAM_C SINE Alu 1 134 -9 734 250 56 51 chr2 32378457 32378878 -218308976 - L1MEc LINE L1 -3714 2523 2120 430 261 9 0 chr2 32378974 32379089 -218308765 - L1M4 LINE L1 -1981 4165 4050 2138 108 7 24 chr2 32379197 32379494 -218308360 - AluSx SINE Alu -20 292 1 911 200 19 29 chr2 32379762 32379967 -218307887 - MLT1A2 LTR MaLR 0 374 172 * 1764 133 7 7 chr2 32379957 32380236 -218307618 + MSTA LTR MaLR 150 428 0 359 132 0 110 chr2 32380237 32380328 -218307526 - MLT1A2 LTR MaLR -293 81 1 982 232 61 67 chr2 32380904 32381429 -218306425 + L1MC5 LINE L1 7173 7694 -267 298 226 21 21 chr2 32381441 32381534 -218306320 + (TA)n Simple_repeat Simple_repeat 2 94 0 331 303 121 0 chr2 32381646 32381778 -218306076 - L2 LINE L2 -639 2675 2528 406 277 15 46 chr2 32383057 32383187 -218304667 - MIR SINE MIR -70 192 67 750 260 41 58 chr2 32383734 32383976 -218303878 + MIR SINE MIR 20 257 -5 2369 106 0 0 chr2 32384864 32385165 -218302689 + AluSx SINE Alu 4 304 -8 192 152 0 0 chr2 32385318 32385351 -218302503 + C-rich Low_complexity Low_complexity 6 38 0 542 195 176 34 chr2 32385374 32385641 -218302213 - MER69 DNA AcHobo -13 2513 2209 606 180 0 0 chr2 32385726 32385848 -218302006 + LTR37A LTR ERV1 301 422 -4 534 171 189 0 chr2 32386187 32386298 -218301556 - FLAM_A SINE Alu -1 132 1 1956 138 3 0 chr2 32386722 32387004 -218300850 + AluSx SINE Alu 28 310 -2 709 231 25 66 chr2 32387130 32387372 -218300482 + MER31-int LTR ERV1 3852 4083 -853 2138 109 34 0 chr2 32387372 32387665 -218300189 + AluSq SINE Alu 1 303 -10 421 231 116 0 chr2 32387962 32388109 -218299745 + LTR37A LTR ERV1 38 201 -225 335 325 34 12 chr2 32388152 32388472 -218299382 - L1M4 LINE L1 -1451 4695 4369 21 71 0 0 chr2 32388714 32388756 -218299098 + AT_rich Low_complexity Low_complexity 1 42 0 689 173 0 9 chr2 32388876 32389051 -218298803 - MER89 LTR ERV1 0 559 334 389 200 129 86 chr2 32389039 32389179 -218298675 - MLT1C LTR MaLR -321 146 1 * 364 200 32 0 chr2 32389180 32389275 -218298579 + L1MB8 LINE L1 6079 6176 -2 198 71 0 0 chr2 32389686 32389714 -218298140 + (CTA)n Simple_repeat Simple_repeat 1 28 0 1049 218 32 9 chr2 32390432 32390772 -218297082 + L1MEc LINE L1 2047 2394 -4002 24 53 0 0 chr2 32390779 32390817 -218297037 + AT_rich Low_complexity Low_complexity 1 38 0 2153 157 3 3 chr2 32390832 32391189 -218296665 - MLT2C1 LTR ERVL -40 357 1 4244 237 49 22 chr2 32391200 32391715 -218296139 + L1MEc LINE L1 2374 2873 -3342 1960 162 0 7 chr2 32391715 32392018 -218295836 + AluJb SINE Alu 1 301 -11 4244 237 49 22 chr2 32392018 32393024 -218294830 + L1MEc LINE L1 2873 3937 -2278 1996 175 37 30 chr2 32393025 32393573 -218294281 + MLT2A2 LTR ERVL 1 554 0 2799 208 77 32 chr2 32393583 32394501 -218293353 + L1MEc LINE L1 3944 4903 -1312 961 252 189 45 chr2 32394556 32394980 -218292874 + L2 LINE L2 2824 3308 -5 230 270 87 35 chr2 32395038 32395153 -218292701 - L2 LINE L2 -9 3304 3184 1682 129 13 41 chr2 32395320 32395637 -218292217 + L1MCa LINE L1 37 344 -6082 7808 187 26 22 chr2 32395641 32397250 -218290604 + L1PA13 LINE L1 1 1615 -5172 1553 143 0 0 chr2 32397250 32397523 -218290331 + L1P LINE L1 4623 4895 -1251 * 17701 175 15 17 chr2 32397521 32397880 -218289974 + L1PA13 LINE L1 2122 2480 -4334 2290 122 0 0 chr2 32397880 32398191 -218289663 + AluSx SINE Alu 1 311 -1 17701 175 15 17 chr2 32398191 32401190 -218286664 + L1PA13 LINE L1 2480 5482 -1332 4643 171 51 46 chr2 32401190 32402256 -218285598 + MER11C LTR ERVK 1 1071 0 17701 175 15 17 chr2 32402256 32402732 -218285122 + L1PA13 LINE L1 5482 5957 -857 1886 174 0 3 chr2 32402732 32403037 -218284817 + AluJb SINE Alu 1 304 -8 17701 175 15 17 chr2 32403037 32403879 -218283975 + L1PA13 LINE L1 5957 6803 -11 886 190 150 46 chr2 32403925 32404161 -218283693 + MER21B LTR ERV1 23 271 -475 823 276 40 12 chr2 32404151 32404401 -218283453 + MER21B LTR ERV1 493 749 -114 * 237 241 0 0 chr2 32404478 32404536 -218283318 + L1MCa LINE L1 360 417 -6009 695 190 0 0 chr2 32404815 32404936 -218282918 + Tigger5 DNA MER2_type 2200 2320 -3 3254 211 27 8 chr2 32404945 32406268 -218281586 + L1MCa LINE L1 2057 3406 -3020 651 117 0 0 chr2 32406268 32406371 -218281483 + (GGAA)n Simple_repeat Simple_repeat 1 103 0 782 288 105 38 chr2 32406655 32407075 -218280779 - MLT1J2 LTR MaLR 0 450 3 976 172 17 0 chr2 32407352 32407526 -218280328 + L1MD3 LINE L1 7501 7677 -318 6238 153 5 20 chr2 32407527 32408337 -218279517 + L1MA9 LINE L1 4217 5037 -1275 1926 163 7 0 chr2 32408337 32408637 -218279217 + AluSx SINE Alu 1 302 -10 6238 153 5 20 chr2 32408637 32409092 -218278762 + L1MA9 LINE L1 5037 5945 -367 653 158 18 35 chr2 32409095 32409209 -218278645 + FLAM_C SINE Alu 7 118 -25 4891 98 30 6 chr2 32409218 32409931 -218277923 + L1MA2 LINE L1 5428 6157 -147 325 114 0 0 chr2 32409932 32409976 -218277878 + Alu SINE Alu 1 44 -258 1278 150 5 5 chr2 32409976 32410169 -218277685 + AluSg/x SINE Alu 91 283 -27 903 136 74 0 chr2 32410171 32410333 -218277521 + L1MA3 LINE L1 6130 6303 -2 1167 170 170 7 chr2 32410409 32410691 -218277163 + L1MA8 LINE L1 5896 6223 -68 979 126 7 13 chr2 32410919 32411102 -218276752 - AluJb SINE Alu 0 315 134 525 261 129 60 chr2 32411890 32412238 -218275616 - MLT1I LTR MaLR -13 396 25 379 230 50 10 chr2 32412678 32412778 -218275076 - MLT1G1 LTR MaLR 0 595 492 * 1995 225 22 5 chr2 32412776 32413176 -218274678 + MER45B DNA AcHobo 240 646 -394 1958 100 74 0 chr2 32413176 32413446 -218274408 + AluSg SINE Alu 1 290 -20 42033 60 8 1 chr2 32413447 32419536 -218268318 + L1PA5 LINE L1 12 6141 -13 186 43 0 0 chr2 32419539 32419562 -218268292 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2069 122 3 29 chr2 32419575 32419887 -218267967 + AluSx SINE Alu 1 304 -8 1857 198 23 8 chr2 32419887 32420282 -218267572 + MER45B DNA AcHobo 639 1039 -1 225 303 17 79 chr2 32420283 32420461 -218267393 + MLT1L LTR MaLR 11 177 -438 401 277 185 15 chr2 32420474 32420669 -218267185 + L2 LINE L2 3086 3313 0 951 246 156 60 chr2 32420675 32421073 -218266781 + MLT1L LTR MaLR 172 607 -8 2042 100 26 26 chr2 32421115 32421424 -218266430 + AluSx SINE Alu 1 309 -3 1685 113 52 0 chr2 32421424 32421653 -218266201 + AluSx SINE Alu 1 241 -71 3640 111 168 142 chr2 32421653 32422958 -218264896 + pTR5 LTR ERV1 750 2407 -31 273 100 62 62 chr2 32422958 32423038 -218264816 + Alu SINE Alu 221 300 0 246 203 14 68 chr2 32423325 32423399 -218264455 - MLT1J LTR MaLR -320 191 122 750 203 61 7 chr2 32423441 32423589 -218264265 + MLT1C LTR MaLR 305 460 -7 840 206 0 0 chr2 32423828 32424163 -218263691 + (TG)n Simple_repeat Simple_repeat 1 335 0 22 0 0 0 chr2 32424470 32424492 -218263362 + AT_rich Low_complexity Low_complexity 1 22 0 437 251 73 26 chr2 32424572 32424763 -218263091 - L1MC4a LINE L1 -1818 5990 5791 355 300 113 23 chr2 32424853 32425110 -218262744 - L1MC4a LINE L1 -864 5282 5003 523 203 8 17 chr2 32425112 32425230 -218262624 - L1MC4a LINE L1 -1199 4947 4831 4616 52 0 2 chr2 32425231 32425768 -218262086 + L1PA5 LINE L1 5616 6151 -3 4982 196 56 35 chr2 32425950 32427162 -218260692 - L1MC4a LINE L1 -1326 4820 3584 906 162 0 0 chr2 32427291 32427427 -218260427 + AluSq/x SINE Alu 1 136 -176 1779 118 10 78 chr2 32427427 32427767 -218260087 + AluSx SINE Alu 1 319 0 308 301 43 0 chr2 32428165 32428258 -218259596 - MIR SINE MIR -54 208 112 638 211 155 12 chr2 32428266 32428427 -218259427 + MER5A DNA MER1_type 4 187 -2 2051 108 13 33 chr2 32429005 32429312 -218258542 + AluSq SINE Alu 1 301 -12 372 273 120 53 chr2 32430041 32430191 -218257663 + MIR SINE MIR 75 234 -28 291 313 81 6 chr2 32430793 32430953 -218256901 - MIR SINE MIR -44 218 47 2885 202 82 83 chr2 32431143 32431970 -218255884 - LTR1B LTR ERV1 0 826 1 2313 104 0 7 chr2 32432553 32432862 -218254992 - AluSc SINE Alu -2 307 1 2074 128 3 0 chr2 32433890 32434180 -218253674 + AluSp SINE Alu 1 291 -22 219 111 44 0 chr2 32434180 32434225 -218253629 + (TA)n Simple_repeat Simple_repeat 2 48 0 214 304 0 14 chr2 32434730 32434799 -218253055 + GA-rich Low_complexity Low_complexity 2 69 0 195 301 60 0 chr2 32434802 32434885 -218252969 + L2 LINE L2 2230 2317 -997 1468 214 38 99 chr2 32434930 32435487 -218252367 - L1ME1 LINE L1 -4 6162 5640 5193 150 16 4 chr2 32435501 32436684 -218251170 - L1MA2 LINE L1 -216 6088 4920 2444 157 28 39 chr2 32436684 32436725 -218251129 - MSTA LTR MaLR 0 428 388 2439 94 0 0 chr2 32436725 32437032 -218250822 + AluSc SINE Alu 1 307 -2 2474 88 0 0 chr2 32437032 32437339 -218250515 + AluY SINE Alu 1 307 -4 2444 157 28 39 chr2 32437339 32437729 -218250125 - MSTA LTR MaLR -38 390 1 6127 173 38 6 chr2 32437729 32438797 -218249057 - MSTA-int LTR MaLR 0 1651 550 5193 150 16 4 chr2 32437729 32437740 -218250114 - L1MA2 LINE L1 -1384 4920 4882 * 592 98 11 11 chr2 32438785 32438877 -218248977 - MSTA-int LTR MaLR -1559 92 1 1955 154 31 9 chr2 32438877 32439202 -218248652 - MSTA LTR MaLR 0 428 97 3020 166 36 2 chr2 32439202 32439761 -218248093 - L1MA2 LINE L1 -2094 4052 3475 2425 112 48 11 chr2 32439738 32440112 -218247742 - L1PA11 LINE L1 0 6174 5787 * 2666 185 9 6 chr2 32440105 32440641 -218247213 - L1 LINE L1 -2492 5073 4536 2102 211 42 8 chr2 32441938 32442411 -218245443 - L1 LINE L1 -3286 4279 3791 8092 26 14 0 chr2 32442411 32443455 -218244399 - L1PA4 LINE L1 -5 6150 5103 7696 33 1 0 chr2 32443455 32444358 -218243496 + L1PA4 LINE L1 4194 5097 -1049 * 11212 167 61 64 chr2 32444348 32445013 -218242841 - L1 LINE L1 -3757 3808 3142 2411 85 0 7 chr2 32445013 32445319 -218242535 + AluY SINE Alu 1 304 -7 11212 167 61 64 chr2 32445319 32448106 -218239748 - L1 LINE L1 -4423 3142 25 4073 191 41 44 chr2 32448111 32448605 -218239249 - L1ME LINE L1 -562 5604 5110 2019 142 7 0 chr2 32448605 32448894 -218238960 - AluSx SINE Alu -21 291 1 4073 191 41 44 chr2 32448894 32449670 -218238184 - L1ME LINE L1 -1056 5110 4323 22 0 0 0 chr2 32449707 32449729 -218238125 + AT_rich Low_complexity Low_complexity 1 22 0 855 213 240 14 chr2 32449878 32450174 -218237680 - MLT1A1 LTR MaLR 0 365 3 902 164 7 7 chr2 32450878 32451024 -218236830 - FRAM SINE Alu -25 151 6 704 167 0 9 chr2 32451372 32451480 -218236374 + AluJo SINE Alu 87 193 -119 393 75 0 0 chr2 32451480 32451533 -218236321 + (GA)n Simple_repeat Simple_repeat 2 54 0 302 263 76 0 chr2 32451536 32451654 -218236200 - MIR3 SINE MIR -75 133 7 343 240 0 13 chr2 32451661 32451736 -218236118 + MER112 DNA MER1_type 1 74 -186 252 0 0 0 chr2 32451737 32451765 -218236089 + (CA)n Simple_repeat Simple_repeat 1 28 0 728 196 143 0 chr2 32451832 32452021 -218235833 - MIR SINE MIR -46 216 1 7348 64 35 0 chr2 32452492 32453413 -218234441 - L1PA7 LINE L1 -2 6152 5227 25 90 0 0 chr2 32453578 32453645 -218234209 + AT_rich Low_complexity Low_complexity 1 67 0 2292 136 23 6 chr2 32453817 32454170 -218233684 - MER46B DNA MER2_type -1 235 2 2109 134 13 19 chr2 32454582 32454895 -218232959 + AluSx SINE Alu 1 311 -1 196 211 0 0 chr2 32455214 32455252 -218232602 - MIR SINE MIR -176 86 49 2417 106 3 0 chr2 32455650 32455962 -218231892 - AluSp SINE Alu 0 313 1 458 308 93 30 chr2 32455995 32456232 -218231622 - MIR SINE MIR 0 262 11 2143 126 7 7 chr2 32456361 32456671 -218231183 + AluSx SINE Alu 3 312 0 2454 67 6 22 chr2 32456985 32457300 -218230554 - AluY SINE Alu -1 310 1 1994 148 13 0 chr2 32457584 32457882 -218229972 - AluSx SINE Alu -10 302 1 1942 127 58 0 chr2 32458142 32458433 -218229421 + AluSx SINE Alu 1 308 -4 2286 104 0 0 chr2 32458457 32458756 -218229098 - AluY SINE Alu -12 299 1 256 270 32 0 chr2 32458941 32459004 -218228850 - MIR SINE MIR -108 154 90 270 264 114 29 chr2 32459562 32459702 -218228152 - MER5B DNA MER1_type 0 178 27 238 333 65 9 chr2 32459609 32459717 -218228137 + MER5A DNA MER1_type 70 183 -6 * 3132 37 0 3 chr2 32460104 32460482 -218227372 - L1PA3 LINE L1 0 6155 5779 2736 10 0 0 chr2 32460482 32460789 -218227065 + L1PA3 LINE L1 5470 5776 -379 187 197 30 91 chr2 32461427 32461493 -218226361 - MIR3 SINE MIR -23 185 124 2692 70 11 0 chr2 32461498 32461855 -218225999 + L1PA7 LINE L1 5793 6153 -1 276 258 164 51 chr2 32462049 32462305 -218225549 - L1ME4a LINE L1 -5 6116 5832 759 207 61 0 chr2 32462629 32462793 -218225061 + FRAM SINE Alu 1 174 -2 248 290 78 72 chr2 32462830 32463023 -218224831 - L3 LINE CR1 -576 1001 808 2310 221 130 11 chr2 32463424 32464205 -218223649 - L1ME1 LINE L1 -3 6232 5198 2087 123 10 0 chr2 32464205 32464506 -218223348 - AluSx SINE Alu -8 304 1 2310 221 130 11 chr2 32464506 32464693 -218223161 - L1ME1 LINE L1 -1037 5198 5035 1809 133 10 31 chr2 32465041 32465334 -218222520 + AluSx SINE Alu 1 287 -25 575 259 19 12 chr2 32465385 32465547 -218222307 - L1ME1 LINE L1 -1198 5017 4855 795 218 0 0 chr2 32465548 32465695 -218222159 - FRAM SINE Alu -13 163 17 533 201 125 86 chr2 32465705 32465811 -218222043 - L1ME1 LINE L1 -1342 4873 4773 1494 178 0 83 chr2 32465811 32466149 -218221705 + AluJo SINE Alu 1 310 -2 533 201 125 86 chr2 32466149 32466345 -218221509 - L1ME1 LINE L1 -1442 4773 4559 368 287 0 0 chr2 32466341 32466428 -218221426 - L1ME1 LINE L1 -2097 4118 4032 * 1358 246 161 24 chr2 32466419 32467090 -218220764 - L1ME1 LINE L1 -2421 3794 3032 1947 117 57 0 chr2 32467145 32467428 -218220426 + AluSx SINE Alu 1 299 -13 1393 191 50 0 chr2 32467440 32467702 -218220152 + AluJo SINE Alu 1 275 -37 1374 258 91 15 chr2 32467720 32468429 -218219425 - L1ME1 LINE L1 -3276 2939 2140 2158 60 57 7 chr2 32468452 32468733 -218219121 + AluSp SINE Alu 1 295 -18 1243 106 0 0 chr2 32468818 32468979 -218218875 + AluSc SINE Alu 1 161 -148 21 36 0 0 chr2 32469681 32469709 -218218145 + AT_rich Low_complexity Low_complexity 1 28 0 1657 132 60 0 chr2 32469840 32470106 -218217748 - AluSx SINE Alu -30 282 1 235 323 32 21 chr2 32470753 32470846 -218217008 + MIR SINE MIR 22 115 -147 255 184 112 31 chr2 32470851 32470949 -218216905 - L1M4 LINE L1 -923 5223 5118 320 240 6 43 chr2 32470977 32471069 -218216785 - MLT1E1 LTR MaLR -266 388 193 310 208 0 42 chr2 32471104 32471176 -218216678 - MLT1E1 LTR MaLR -511 82 14 302 268 0 0 chr2 32471367 32471438 -218216416 - MER116 DNA Mariner -2 78 8 240 336 144 16 chr2 32471580 32471705 -218216149 + MIR SINE MIR 48 188 -74 22 0 0 0 chr2 32471920 32471942 -218215912 + AT_rich Low_complexity Low_complexity 1 22 0 567 40 0 0 chr2 32472437 32472511 -218215343 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 674 175 33 0 chr2 32472512 32472632 -218215222 - FLAM_C SINE Alu -19 124 1 417 20 0 0 chr2 32475344 32475394 -218212460 + (CA)n Simple_repeat Simple_repeat 1 50 0 25 31 0 0 chr2 32475498 32475530 -218212324 + AT_rich Low_complexity Low_complexity 1 32 0 1705 123 63 18 chr2 32475897 32476181 -218211673 + AluSx SINE Alu 1 297 -15 238 233 133 22 chr2 32476533 32476623 -218211231 + MARNA DNA Mariner 309 408 -178 197 119 24 0 chr2 32476657 32476699 -218211155 + (TA)n Simple_repeat Simple_repeat 2 44 0 2073 115 18 0 chr2 32476756 32477034 -218210820 - AluSx SINE Alu -23 289 7 1749 139 21 7 chr2 32477922 32478202 -218209652 + AluSx SINE Alu 11 294 -18 207 417 0 0 chr2 32478202 32478310 -218209544 + MIR SINE MIR 40 147 -61 285 366 16 63 chr2 32478424 32478615 -218209239 - MIR3 SINE MIR -11 197 16 1651 150 10 70 chr2 32479056 32479369 -218208485 - AluJb SINE Alu -18 294 1 23 33 0 0 chr2 32479369 32479399 -218208455 + AT_rich Low_complexity Low_complexity 1 30 0 29 84 0 0 chr2 32479615 32479686 -218208168 + AT_rich Low_complexity Low_complexity 1 71 0 332 149 0 15 chr2 32480005 32480072 -218207782 + (CA)n Simple_repeat Simple_repeat 1 66 0 281 281 0 0 chr2 32480802 32480859 -218206995 - MER5A DNA MER1_type -130 59 3 485 118 0 0 chr2 32480939 32481007 -218206847 + AluJb SINE Alu 48 115 -197 333 237 18 25 chr2 32481043 32481161 -218206693 + GA-rich Low_complexity Low_complexity 1 118 -395 2144 91 0 4 chr2 32481161 32481437 -218206417 + AluSx SINE Alu 1 275 -37 333 237 18 25 chr2 32481437 32481560 -218206294 + GA-rich Low_complexity Low_complexity 118 513 0 307 373 86 4 chr2 32481601 32481845 -218206009 - L3 LINE CR1 -243 1334 1071 1061 223 23 0 chr2 32482609 32482824 -218205030 + MER58A DNA MER1_type 1 220 -4 386 335 116 6 chr2 32483423 32483596 -218204258 - MIR3 SINE MIR -1 207 16 517 215 46 39 chr2 32483657 32483787 -218204067 - FLAM_A SINE Alu -2 131 1 2790 7 0 0 chr2 32483921 32484229 -218203625 - AluYa5 SINE Alu -3 308 1 1792 216 99 43 chr2 32484281 32484907 -218202947 + L1ME4a LINE L1 5457 6117 -4 234 0 0 0 chr2 32485297 32485323 -218202531 + (T)n Simple_repeat Simple_repeat 1 26 0 24 53 0 0 chr2 32485774 32485812 -218202042 + AT_rich Low_complexity Low_complexity 1 38 0 207 186 0 0 chr2 32488064 32488107 -218199747 + A-rich Low_complexity Low_complexity 1 43 0 2129 125 0 3 chr2 32488698 32488987 -218198867 - AluSx SINE Alu -24 288 1 186 43 0 0 chr2 32489380 32489403 -218198451 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 200 210 0 16 chr2 32489604 32489666 -218198188 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 2176 112 0 0 chr2 32489841 32490126 -218197728 + AluSx SINE Alu 1 285 -27 261 0 0 0 chr2 32490126 32490155 -218197699 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 0 0 0 chr2 32492908 32492936 -218194918 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 32493183 32493214 -218194640 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr2 32493332 32493358 -218194496 + AT_rich Low_complexity Low_complexity 1 26 0 240 258 86 32 chr2 32493545 32493638 -218194216 + L2 LINE L2 2181 2278 -1036 736 305 98 38 chr2 32493647 32493795 -218194059 + L2 LINE L2 2496 2634 -679 2154 103 3 7 chr2 32493795 32494096 -218193758 - AluSx SINE Alu -12 300 1 736 305 98 38 chr2 32494096 32494700 -218193154 + L2 LINE L2 2634 3308 -5 723 289 67 63 chr2 32494701 32495161 -218192693 + L2 LINE L2 2285 2746 -568 504 224 182 42 chr2 32495223 32495415 -218192439 - L2 LINE L2 -3 3310 3092 294 246 178 0 chr2 32495424 32495542 -218192312 + MER20B DNA MER1_type 31 169 -614 1415 208 86 12 chr2 32495596 32496014 -218191840 + MER20B DNA MER1_type 259 707 -76 774 272 122 64 chr2 32496017 32496580 -218191274 - L2 LINE L2 -15 3298 2626 514 267 0 22 chr2 32496580 32496715 -218191139 - L2 LINE L2 -879 2435 2304 188 74 37 0 chr2 32497304 32497331 -218190523 + L2 LINE L2 1867 1894 -1420 1183 195 87 0 chr2 32497643 32497941 -218189913 - MER33 DNA MER1_type 0 324 1 303 360 101 7 chr2 32498150 32498289 -218189565 + L2 LINE L2 3109 3260 -12 359 343 37 0 chr2 32498720 32498854 -218189000 - MIR3 SINE MIR -7 201 63 21 0 0 0 chr2 32498903 32498924 -218188930 + AT_rich Low_complexity Low_complexity 1 21 0 1303 172 0 21 chr2 32498929 32499162 -218188692 + AluJb SINE Alu 84 311 -1 22 0 0 0 chr2 32499250 32499272 -218188582 + AT_rich Low_complexity Low_complexity 1 22 0 1934 154 0 16 chr2 32499317 32499629 -218188225 + AluJb SINE Alu 1 307 -5 1534 171 26 43 chr2 32499836 32499971 -218187883 + AluJo SINE Alu 2 138 -174 1786 145 3 3 chr2 32499971 32500279 -218187575 + AluJb SINE Alu 1 308 0 1534 171 26 43 chr2 32500279 32500447 -218187407 + AluJo SINE Alu 138 301 -11 22 0 0 0 chr2 32500730 32500752 -218187102 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 32501033 32501070 -218186784 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr2 32502160 32502188 -218185666 + AT_rich Low_complexity Low_complexity 1 28 0 2311 112 0 0 chr2 32503225 32503529 -218184325 - AluSx SINE Alu -8 304 1 26 30 0 0 chr2 32504389 32504422 -218183432 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 32504618 32504649 -218183205 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 32504735 32504756 -218183098 + AT_rich Low_complexity Low_complexity 1 21 0 218 217 133 12 chr2 32505563 32505646 -218182208 - MIR SINE MIR -44 218 126 510 231 128 0 chr2 32506291 32506408 -218181446 - FLAM_A SINE Alu 0 133 2 922 171 18 77 chr2 32508797 32509019 -218178835 - MER20B DNA MER1_type -2 217 9 229 194 0 75 chr2 32509113 32509180 -218178674 - 7SK RNA RNA -99 94 33 22 56 0 0 chr2 32511054 32511090 -218176764 + AT_rich Low_complexity Low_complexity 1 36 0 375 314 70 12 chr2 32511667 32511839 -218176015 + MIR SINE MIR 1 182 -80 245 302 59 20 chr2 32512177 32512274 -218175580 + L1MB7 LINE L1 27 119 -6423 186 43 0 0 chr2 32512274 32512297 -218175557 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 245 302 59 20 chr2 32512297 32512401 -218175453 + L1MB7 LINE L1 119 236 -6306 437 189 11 22 chr2 32512912 32513002 -218174852 - FLAM_A SINE Alu -13 129 41 241 349 0 12 chr2 32513006 32513092 -218174762 + L1MB7 LINE L1 792 876 -5666 1746 241 89 28 chr2 32513155 32513947 -218173907 + L1MB7 LINE L1 893 1723 -4881 2566 40 7 3 chr2 32513947 32514251 -218173603 - AluY SINE Alu -5 306 2 1746 241 89 28 chr2 32514251 32514305 -218173549 + L1MB7 LINE L1 1723 1772 -4832 1640 194 56 56 chr2 32514306 32514461 -218173393 + L1MB7 LINE L1 5399 5553 -1091 798 266 47 0 chr2 32514461 32514675 -218173179 - MER58A DNA MER1_type 0 224 1 1640 194 56 56 chr2 32514675 32515019 -218172835 + L1MB7 LINE L1 5552 5898 -746 * 14685 101 8 1 chr2 32515008 32517130 -218170724 - L1PA7 LINE L1 -1667 4479 2342 6978 60 6 3 chr2 32517130 32518804 -218169050 + L1PA7 LINE L1 4476 6154 0 2706 194 85 59 chr2 32518804 32519199 -218168655 + L1MB7 LINE L1 5885 6268 -414 2250 122 0 3 chr2 32519199 32519511 -218168343 + AluSx SINE Alu 1 311 -1 2706 194 85 59 chr2 32519511 32519734 -218168120 + L1MB7 LINE L1 6268 6484 -198 2234 111 0 7 chr2 32519734 32520031 -218167823 + AluSx SINE Alu 1 295 -17 2706 194 85 59 chr2 32520031 32520102 -218167752 + L1MB7 LINE L1 6484 6552 -130 621 149 8 82 chr2 32520102 32520236 -218167618 + FLAM_A SINE Alu 2 125 -8 1821 132 70 0 chr2 32520246 32520519 -218167335 + AluSx SINE Alu 3 294 -18 2706 194 85 59 chr2 32520519 32520584 -218167270 + L1MB7 LINE L1 6560 6672 -10 198 295 71 27 chr2 32520605 32520717 -218167137 + MIR SINE MIR 61 177 -85 636 135 0 0 chr2 32520852 32520956 -218166898 - FRAM SINE Alu -3 173 70 48 72 0 0 chr2 32521128 32521225 -218166629 + AT_rich Low_complexity Low_complexity 1 97 0 867 183 50 135 chr2 32522251 32522586 -218165268 + MER68 LTR ERV1 11 357 -248 1169 135 52 11 chr2 32522612 32522817 -218165037 - MER1B DNA MER1_type -78 219 35 1977 156 0 0 chr2 32523061 32523362 -218164492 + AluJb SINE Alu 1 301 -11 2137 97 13 19 chr2 32524070 32524379 -218163475 - AluSg SINE Alu -3 307 1 198 0 0 0 chr2 32524393 32524415 -218163439 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2248 113 0 3 chr2 32524423 32524732 -218163122 - AluSg SINE Alu -2 308 1 198 362 29 14 chr2 32524762 32524900 -218162954 + L2 LINE L2 2716 2855 -459 246 368 79 12 chr2 32525259 32525512 -218162342 + L2 LINE L2 3016 3285 -28 1703 162 37 0 chr2 32525624 32525896 -218161958 + AluJb SINE Alu 3 284 -28 366 23 0 0 chr2 32525896 32525939 -218161915 + (CA)n Simple_repeat Simple_repeat 2 44 0 4140 197 82 92 chr2 32526475 32528688 -218159166 + L1MC2 LINE L1 3 2236 -4190 1760 175 10 7 chr2 32528688 32528991 -218158863 + AluJb SINE Alu 1 304 -8 4140 197 82 92 chr2 32528991 32529230 -218158624 + L1MC2 LINE L1 2236 4908 -1518 2326 157 40 42 chr2 32529220 32529723 -218158131 + L1MC2 LINE L1 6015 6516 -108 * 1239 172 5 18 chr2 32529832 32530053 -218157801 - AluJb SINE Alu -94 218 1 2038 109 3 26 chr2 32530161 32530464 -218157390 + AluSx SINE Alu 1 296 -16 1348 107 0 0 chr2 32530465 32530642 -218157212 + AluSp SINE Alu 126 302 -11 1930 84 98 0 chr2 32531106 32531380 -218156474 + AluSc SINE Alu 1 301 -8 38 51 0 0 chr2 32531627 32531686 -218156168 + AT_rich Low_complexity Low_complexity 1 59 0 361 286 82 48 chr2 32531744 32531891 -218155963 - L2 LINE L2 0 3272 3121 506 255 73 114 chr2 32531966 32532385 -218155469 + MLT1H LTR MaLR 80 478 -71 2147 133 56 0 chr2 32532385 32532745 -218155109 + L1MA1 LINE L1 5923 6302 0 506 255 73 114 chr2 32532745 32532815 -218155039 + MLT1H LTR MaLR 478 549 0 1379 194 4 33 chr2 32532819 32533092 -218154762 + AluJo SINE Alu 39 303 -9 801 163 14 21 chr2 32533095 32533236 -218154618 + AluJo/FRAM SINE Alu 137 276 -36 400 293 33 43 chr2 32533448 32533654 -218154200 + MLT1H LTR MaLR 20 234 -315 267 249 129 57 chr2 32533803 32534015 -218153839 + MLT1H LTR MaLR 322 567 0 1672 185 0 10 chr2 32534332 32534634 -218153220 - AluJb SINE Alu -9 303 5 413 315 70 51 chr2 32534890 32535204 -218152650 + L3 LINE CR1 680 999 -578 21 57 0 0 chr2 32535419 32535454 -218152400 + AT_rich Low_complexity Low_complexity 1 35 0 526 198 0 10 chr2 32535454 32535550 -218152304 - L2 LINE L2 -32 3240 3146 278 399 14 14 chr2 32535544 32535687 -218152167 + L3 LINE CR1 1430 1572 -5 * 206 310 14 0 chr2 32536282 32536353 -218151501 + A-rich Low_complexity Low_complexity 2 73 0 183 114 0 0 chr2 32537216 32537251 -218150603 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 980 208 7 91 chr2 32537254 32537562 -218150292 - AluJb SINE Alu -30 282 1 1846 161 10 24 chr2 32537646 32537944 -218149910 + AluJo SINE Alu 1 294 -18 301 278 0 44 chr2 32537944 32538059 -218149795 + (TATATG)n Simple_repeat Simple_repeat 1 109 0 303 93 0 0 chr2 32538059 32538102 -218149752 + (TG)n Simple_repeat Simple_repeat 1 43 0 25 31 0 0 chr2 32538411 32538443 -218149411 + AT_rich Low_complexity Low_complexity 1 32 0 182 271 35 90 chr2 32538443 32538587 -218149267 - MIR SINE MIR -40 222 87 899 222 54 42 chr2 32539136 32539483 -218148371 + MLT1B LTR MaLR 1 374 0 5321 147 24 2 chr2 32540585 32541460 -218146394 - L1PA15 LINE L1 -5 6160 5267 467 340 94 26 chr2 32543012 32543277 -218144577 + L2 LINE L2 2681 2963 -351 2352 86 3 3 chr2 32543305 32543609 -218144245 + AluSg SINE Alu 1 304 -6 4055 203 99 65 chr2 32543681 32544194 -218143660 + Charlie1a DNA MER1_type 1 495 -2266 1822 159 10 19 chr2 32544194 32544503 -218143351 + AluJo SINE Alu 1 306 -6 4055 203 99 65 chr2 32544503 32544677 -218143177 + Charlie1a DNA MER1_type 495 662 -2099 2044 107 11 0 chr2 32544677 32544996 -218142858 + AluSq SINE Alu 2 323 0 4055 203 99 65 chr2 32544996 32545158 -218142696 + Charlie1a DNA MER1_type 662 817 -1944 2105 101 32 0 chr2 32545158 32545435 -218142419 + AluSc SINE Alu 1 286 -23 4055 203 99 65 chr2 32545435 32545989 -218141865 + Charlie1a DNA MER1_type 817 1455 0 378 336 55 0 chr2 32546061 32546189 -218141665 + L2 LINE L2 3134 3268 -4 2172 127 0 13 chr2 32546370 32546685 -218141169 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 32546792 32546813 -218141041 + AT_rich Low_complexity Low_complexity 1 21 0 292 216 34 34 chr2 32547043 32547131 -218140723 - L1ME LINE L1 -467 5654 5567 1746 152 7 14 chr2 32548087 32548376 -218139478 + AluSx SINE Alu 1 287 -25 21 36 0 0 chr2 32548379 32548407 -218139447 + AT_rich Low_complexity Low_complexity 1 28 0 2045 90 10 50 chr2 32548766 32549066 -218138788 - AluSx SINE Alu -22 290 3 1642 192 17 3 chr2 32550542 32550844 -218137010 - AluJb SINE Alu -6 306 1 488 232 26 53 chr2 32551087 32551277 -218136577 + L1ME2 LINE L1 5752 5936 -228 978 155 28 22 chr2 32551277 32551458 -218136396 + FRAM SINE Alu 1 176 0 288 0 0 0 chr2 32551461 32551493 -218136361 + (TA)n Simple_repeat Simple_repeat 1 32 0 492 246 84 0 chr2 32551550 32551692 -218136162 + L1MA10 LINE L1 6174 6327 -7 343 182 15 0 chr2 32552527 32552593 -218135261 + Alu SINE Alu 235 301 0 1090 232 24 0 chr2 32553106 32553352 -218134502 - MIR SINE MIR 0 262 11 2313 103 0 0 chr2 32554061 32554371 -218133483 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 32555693 32555721 -218132133 + AT_rich Low_complexity Low_complexity 1 28 0 2489 62 0 7 chr2 32556474 32556782 -218131072 + AluY SINE Alu 1 306 -5 1922 149 10 3 chr2 32556896 32557191 -218130663 - AluJb SINE Alu -13 299 3 217 250 28 0 chr2 32557333 32557405 -218130449 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 3886 242 70 41 chr2 32557774 32558668 -218129186 + L2 LINE L2 1567 2525 -788 1489 171 44 18 chr2 32558668 32558942 -218128912 - AluJo SINE Alu -31 281 1 3886 242 70 41 chr2 32558942 32559663 -218128191 + L2 LINE L2 2525 3224 -89 388 288 65 20 chr2 32559754 32559907 -218127947 - MIR SINE MIR -54 208 49 1709 146 16 57 chr2 32560616 32560931 -218126923 - AluJb SINE Alu -10 302 1 1925 130 0 0 chr2 32561134 32561404 -218126450 + AluSx SINE Alu 43 312 0 1074 258 168 113 chr2 32561904 32562511 -218125343 + L2 LINE L2 739 1516 -1798 464 217 11 0 chr2 32562511 32562603 -218125251 - MER81 DNA DNA -21 93 1 1074 258 168 113 chr2 32562603 32562958 -218124896 + L2 LINE L2 1516 1850 -1464 411 333 124 3 chr2 32563209 32563524 -218124330 - L1ME3A LINE L1 -222 5948 5596 3026 181 70 6 chr2 32563579 32564240 -218123614 + MER67C LTR ERV1 1 703 -7 281 274 38 31 chr2 32564251 32564410 -218123444 - L1ME3A LINE L1 -619 5543 5389 1689 158 38 38 chr2 32564611 32564689 -218123165 + MER7A DNA MER2_type 2 79 -2959 1649 138 80 4 chr2 32564689 32564964 -218122890 + AluSx SINE Alu 1 296 -16 1689 158 38 38 chr2 32564964 32565232 -218122622 + MER7A DNA MER2_type 78 346 0 443 268 176 7 chr2 32566081 32566234 -218121620 - MER5A DNA MER1_type -6 183 5 1310 154 0 0 chr2 32566730 32566918 -218120936 + AluSx SINE Alu 5 192 -120 6375 87 29 33 chr2 32566986 32568038 -218119816 + L1MA1 LINE L1 5256 6302 0 554 200 32 19 chr2 32568051 32568206 -218119648 - HsTC2a DNA Tc2 -18 724 568 2129 126 7 0 chr2 32568209 32568510 -218119344 + AluSx SINE Alu 2 304 -8 2204 118 6 13 chr2 32568546 32568859 -218118995 + AluSx SINE Alu 1 311 -1 1395 253 58 47 chr2 32568907 32569461 -218118393 - HsTC2a DNA Tc2 -181 563 4 2232 109 3 13 chr2 32569627 32569940 -218117914 - AluSg SINE Alu 0 310 1 24 32 0 0 chr2 32570231 32570262 -218117592 + AT_rich Low_complexity Low_complexity 1 31 0 483 265 42 76 chr2 32570957 32571197 -218116657 - L1ME4a LINE L1 -216 5905 5658 2198 107 7 3 chr2 32571197 32571495 -218116359 + AluSg SINE Alu 1 299 -11 483 265 42 76 chr2 32571495 32571564 -218116290 - L1ME4a LINE L1 -463 5658 5607 2317 106 0 3 chr2 32571564 32571866 -218115988 - AluSx SINE Alu -11 301 1 483 265 42 76 chr2 32571866 32571910 -218115944 - L1ME4a LINE L1 -514 5607 5563 750 144 0 0 chr2 32572411 32572522 -218115332 + FLAM_C SINE Alu 1 111 -32 25 0 0 0 chr2 32572556 32572581 -218115273 + AT_rich Low_complexity Low_complexity 1 25 0 268 383 62 6 chr2 32572604 32572660 -218115194 + MER5A DNA MER1_type 10 61 -128 2154 139 0 3 chr2 32572660 32572963 -218114891 + AluSq SINE Alu 1 302 -11 268 383 62 6 chr2 32572963 32573068 -218114786 + MER5A DNA MER1_type 61 180 -9 1563 124 22 4 chr2 32573068 32573293 -218114561 + AluJb SINE Alu 1 229 -83 182 62 31 0 chr2 32573302 32573334 -218114520 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2157 130 3 0 chr2 32573710 32574017 -218113837 - AluSq SINE Alu -5 308 1 380 313 52 47 chr2 32574701 32574893 -218112961 + L1MC4a LINE L1 5732 5924 -1884 2182 119 0 7 chr2 32574971 32575273 -218112581 + AluSc SINE Alu 1 300 -9 1699 172 7 0 chr2 32576743 32577059 -218110795 - AluJb SINE Alu 0 318 1 1680 154 92 0 chr2 32578049 32578322 -218109532 + AluSx SINE Alu 1 298 -14 1979 134 0 0 chr2 32578719 32578995 -218108859 - AluSx SINE Alu -36 276 1 1996 132 10 3 chr2 32579184 32579473 -218108381 + AluSx SINE Alu 1 291 -21 473 290 89 54 chr2 32579518 32579590 -218108264 - MIR SINE MIR -3 259 191 1677 181 0 48 chr2 32579590 32579900 -218107954 + AluJb SINE Alu 1 295 -17 473 290 89 54 chr2 32579900 32580051 -218107803 - MIR SINE MIR -71 191 28 206 212 15 183 chr2 32580019 32580156 -218107698 + MIR3 SINE MIR 47 160 -48 * 1802 156 19 19 chr2 32580216 32580524 -218107330 + AluJb SINE Alu 1 308 -4 241 91 0 0 chr2 32580848 32580881 -218106973 + L1MC5 LINE L1 6768 6800 -1161 1122 287 60 38 chr2 32580881 32581380 -218106474 + MLT2B3 LTR ERVL 1 510 -44 327 106 0 0 chr2 32581453 32581500 -218106354 + MLT2D LTR ERVL 367 413 -1 794 206 22 80 chr2 32581557 32581833 -218106021 + L1MC5 LINE L1 6975 7234 -727 1213 176 42 39 chr2 32581906 32582212 -218105642 + MER33 DNA MER1_type 1 307 -17 201 154 0 0 chr2 32582335 32582374 -218105480 + (CA)n Simple_repeat Simple_repeat 2 40 0 295 213 106 63 chr2 32582407 32582524 -218105330 + L1MC5 LINE L1 7483 7614 -347 2228 82 0 20 chr2 32582524 32582843 -218105011 + AluSp SINE Alu 1 313 0 295 213 106 63 chr2 32582843 32582932 -218104922 + L1MC5 LINE L1 7614 7698 -263 230 208 0 0 chr2 32582992 32583040 -218104814 + L1MC5 LINE L1 7709 7756 -205 2044 143 10 0 chr2 32583041 32583342 -218104512 + AluSq SINE Alu 1 304 -9 386 202 0 11 chr2 32583354 32583448 -218104406 + GA-rich Low_complexity Low_complexity 4 96 0 257 265 73 103 chr2 32583687 32583749 -218104105 + MIR SINE MIR 77 139 -123 2532 61 38 12 chr2 32583749 32584093 -218103761 + L1PA10 LINE L1 5812 6164 -4 257 265 73 103 chr2 32584093 32584166 -218103688 + MIR SINE MIR 139 208 -54 189 267 0 0 chr2 32584221 32584266 -218103588 - MIR3 SINE MIR -41 167 123 2146 116 3 10 chr2 32584558 32584869 -218102985 + AluSx SINE Alu 1 309 -3 2481 49 3 7 chr2 32585229 32585533 -218102321 - AluY SINE Alu -8 303 1 1784 163 21 7 chr2 32585566 32585854 -218102000 - AluJb SINE Alu -20 292 1 184 330 17 34 chr2 32586185 32586303 -218101551 + MER5A DNA MER1_type 3 118 -71 215 184 48 6 chr2 32586319 32586373 -218101481 + MIR SINE MIR 107 160 -62 25 65 0 0 chr2 32587024 32587070 -218100784 + AT_rich Low_complexity Low_complexity 1 46 0 22 70 0 0 chr2 32587131 32587174 -218100680 + AT_rich Low_complexity Low_complexity 1 43 0 226 171 23 34 chr2 32587373 32587461 -218100393 + (TA)n Simple_repeat Simple_repeat 2 88 0 303 221 25 90 chr2 32587461 32587583 -218100271 - L1MC4 LINE L1 -1339 6703 6590 507 17 0 0 chr2 32587684 32587744 -218100110 + (TG)n Simple_repeat Simple_repeat 2 61 0 1403 188 88 0 chr2 32587744 32588005 -218099849 - AluJo SINE Alu -28 284 1 2028 121 7 0 chr2 32588099 32588379 -218099475 - AluSx SINE Alu -30 282 1 203 264 0 19 chr2 32588575 32588628 -218099226 - L2 LINE L2 -5 3308 3257 2126 116 3 0 chr2 32588832 32589126 -218098728 + AluSx SINE Alu 1 295 -17 1529 172 77 11 chr2 32589366 32589639 -218098215 - AluJo SINE Alu -21 291 1 651 197 0 8 chr2 32589646 32589768 -218098086 - FLAM_A SINE Alu -4 138 18 2158 106 0 0 chr2 32589797 32590107 -218097747 + AluSx SINE Alu 1 310 0 2222 120 0 0 chr2 32590538 32590829 -218097025 + AluSx SINE Alu 1 291 -21 4449 161 33 15 chr2 32590832 32591281 -218096573 + L1MB5 LINE L1 5199 5639 -535 2374 102 0 0 chr2 32591281 32591585 -218096269 + AluSx SINE Alu 1 304 -8 4449 161 33 15 chr2 32591585 32592089 -218095765 + L1MB5 LINE L1 5639 6166 -8 186 71 0 0 chr2 32592192 32592220 -218095634 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 1917 121 0 72 chr2 32592574 32592906 -218094948 + AluSc SINE Alu 1 308 -1 2336 101 0 3 chr2 32592998 32593305 -218094549 + AluSq SINE Alu 1 306 -7 1053 164 31 31 chr2 32593997 32594192 -218093662 - AluSg/x SINE Alu -3 307 113 2088 134 7 0 chr2 32594405 32594704 -218093150 + AluSx SINE Alu 1 301 -11 1742 127 31 65 chr2 32595603 32595932 -218091922 - AluSx SINE Alu 0 320 2 268 253 409 0 chr2 32596084 32596214 -218091640 + MIR SINE MIR 1 77 -185 2101 137 0 3 chr2 32596214 32596521 -218091333 + AluSx SINE Alu 1 306 -6 268 253 409 0 chr2 32596521 32596576 -218091278 + MIR SINE MIR 77 262 0 1165 179 124 13 chr2 32596595 32596829 -218091025 - AluJo SINE Alu -52 260 1 1473 182 79 10 chr2 32597086 32597433 -218090421 - THE1C LTR MaLR -1 431 3 26 50 0 0 chr2 32597578 32597618 -218090236 + AT_rich Low_complexity Low_complexity 1 40 0 393 140 75 11 chr2 32597672 32597765 -218090089 + L1MB3 LINE L1 6078 6176 -7 24 32 0 0 chr2 32597765 32597796 -218090058 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 32598119 32598145 -218089709 + (A)n Simple_repeat Simple_repeat 1 26 0 31 20 0 20 chr2 32598243 32598260 -218089594 + AT_rich Low_complexity Low_complexity 1 17 -31 1590 201 0 10 chr2 32598260 32598554 -218089300 + AluJo SINE Alu 2 292 -20 31 20 0 20 chr2 32598554 32598585 -218089269 + AT_rich Low_complexity Low_complexity 17 48 0 3627 206 102 100 chr2 32599965 32600126 -218087728 + L1MC3 LINE L1 6085 6244 -1541 2273 99 0 3 chr2 32600126 32600419 -218087435 + AluSc SINE Alu 1 292 -17 2372 81 3 0 chr2 32600419 32600717 -218087137 + AluSg SINE Alu 1 299 -11 3627 206 102 100 chr2 32600717 32601066 -218086788 + L1MC3 LINE L1 6244 6591 -1194 2045 103 0 71 chr2 32601066 32601377 -218086477 + AluSx SINE Alu 1 289 -23 3627 206 102 100 chr2 32601377 32601539 -218086315 + L1MC3 LINE L1 6591 6751 -1034 2274 95 3 3 chr2 32601539 32601843 -218086011 - AluSp SINE Alu -9 304 1 3627 206 102 100 chr2 32601843 32602206 -218085648 + L1MC3 LINE L1 6751 7112 -673 245 238 0 16 chr2 32602206 32602269 -218085585 + MLT1F1 LTR MaLR 70 131 -436 3627 206 102 100 chr2 32602269 32602637 -218085217 + L1MC3 LINE L1 7112 7561 -224 2134 87 26 23 chr2 32602637 32602946 -218084908 + AluY SINE Alu 1 310 -1 3627 206 102 100 chr2 32602946 32603159 -218084695 + L1MC3 LINE L1 7561 7772 -13 2176 110 3 0 chr2 32603444 32603735 -218084119 - AluSx SINE Alu -20 292 1 766 199 0 0 chr2 32603956 32604087 -218083767 + FLAM_C SINE Alu 1 131 -12 572 86 0 0 chr2 32604111 32604192 -218083662 + HY1 scRNA scRNA 17 97 -15 1479 66 0 25 chr2 32604222 32604418 -218083436 + AluY SINE Alu 1 191 -120 1174 110 0 0 chr2 32604426 32604590 -218083264 + AluY SINE Alu 127 290 -21 540 326 86 50 chr2 32604698 32605115 -218082739 - L2 LINE L2 -10 3303 2872 1454 210 17 0 chr2 32605115 32605406 -218082448 - AluJo SINE Alu -14 298 3 245 300 29 0 chr2 32605703 32605773 -218082081 - L2 LINE L2 0 3272 3201 220 260 73 42 chr2 32605886 32605982 -218081872 - MER5A DNA MER1_type -2 187 89 2399 202 118 43 chr2 32606266 32606374 -218081480 + Charlie1 DNA MER1_type 49 147 -2614 2252 101 3 0 chr2 32606374 32606672 -218081182 + AluSx SINE Alu 1 299 -13 2399 202 118 43 chr2 32606672 32607034 -218080820 + Charlie1 DNA MER1_type 147 480 -2281 2301 81 3 66 chr2 32607034 32607368 -218080486 + AluSp SINE Alu 1 313 0 2399 202 118 43 chr2 32607368 32607767 -218080087 + Charlie1 DNA MER1_type 480 2274 -487 1687 135 25 36 chr2 32607862 32607944 -218079910 + Charlie1 DNA MER1_type 2264 2345 -416 1939 151 3 10 chr2 32607944 32608242 -218079612 + AluJb SINE Alu 1 296 -16 1687 135 25 36 chr2 32608242 32608521 -218079333 + Charlie1 DNA MER1_type 2345 2621 -140 655 174 0 0 chr2 32608558 32608667 -218079187 - AluY SINE Alu -9 302 194 741 159 23 15 chr2 32608684 32608816 -218079038 - FLAM_C SINE Alu 0 133 1 513 233 0 0 chr2 32608838 32608954 -218078900 + Charlie1 DNA MER1_type 2632 2747 -14 344 293 54 75 chr2 32609125 32609364 -218078490 + L1MC4a LINE L1 5833 6066 -1742 2296 84 7 0 chr2 32609400 32609697 -218078157 + AluSp SINE Alu 1 299 -14 28 0 0 0 chr2 32609726 32609754 -218078100 + AT_rich Low_complexity Low_complexity 1 28 0 944 197 11 22 chr2 32610323 32610506 -218077348 + MER58A DNA MER1_type 27 207 -17 2266 97 0 10 chr2 32610611 32610909 -218076945 + AluSx SINE Alu 1 295 -17 939 182 0 0 chr2 32611144 32611298 -218076556 + FRAM SINE Alu 9 162 -14 339 136 0 0 chr2 32611299 32611358 -218076496 + L1MC/D LINE L1 5378 5436 -2372 * 384 298 87 92 chr2 32611333 32612059 -218075795 + L1MEc LINE L1 10 738 -5658 2493 93 0 0 chr2 32612059 32612370 -218075484 - AluSx SINE Alu -1 311 1 384 298 87 92 chr2 32612370 32612457 -218075397 + L1MEc LINE L1 738 824 -5572 2179 117 0 3 chr2 32612457 32612769 -218075085 + AluSx SINE Alu 1 311 0 1806 129 4 0 chr2 32612776 32613032 -218074822 + AluJb SINE Alu 1 257 -55 384 298 87 92 chr2 32613032 32613279 -218074575 + L1MEc LINE L1 830 1077 -5319 2251 108 0 7 chr2 32613279 32613575 -218074279 + AluSx SINE Alu 1 294 -18 384 298 87 92 chr2 32613575 32614141 -218073713 + L1MEc LINE L1 1077 1638 -4758 330 203 29 0 chr2 32614207 32614276 -218073578 + AluSp SINE Alu 121 191 -112 443 87 14 0 chr2 32614276 32614345 -218073509 + (GA)n Simple_repeat Simple_repeat 1 70 0 515 257 29 38 chr2 32614347 32614380 -218073474 + L1MEc LINE L1 2553 2585 -3630 2120 123 13 0 chr2 32614380 32614680 -218073174 + AluSx SINE Alu 6 309 -3 515 257 29 38 chr2 32614680 32614856 -218072998 + L1MEc LINE L1 2585 2760 -3455 882 192 0 0 chr2 32614858 32615004 -218072850 - FRAM SINE Alu -30 146 1 273 296 8 16 chr2 32615238 32615363 -218072491 + L1M4 LINE L1 1564 1687 -4855 634 67 0 0 chr2 32615494 32615569 -218072285 - AluSq/x SINE Alu -162 150 76 621 317 108 21 chr2 32615716 32616050 -218071804 - L2 LINE L2 -372 2942 2580 1739 143 20 34 chr2 32616128 32616422 -218071432 - AluJb SINE Alu -22 290 1 2649 226 91 45 chr2 32616422 32616628 -218071226 + L2 LINE L2 1997 2192 -1121 2220 116 0 3 chr2 32616628 32616930 -218070924 + AluSg SINE Alu 1 301 -9 2649 226 91 45 chr2 32616930 32617490 -218070364 + L2 LINE L2 2192 2725 -588 1766 180 0 24 chr2 32617490 32617784 -218070070 + AluJo SINE Alu 1 287 -25 2649 226 91 45 chr2 32617784 32617992 -218069862 + L2 LINE L2 2725 3015 -298 1737 152 26 30 chr2 32617992 32618295 -218069559 - AluJo SINE Alu -10 302 1 2649 226 91 45 chr2 32618295 32618333 -218069521 + L2 LINE L2 3015 3050 -263 2492 65 0 7 chr2 32618333 32618639 -218069215 - AluY SINE Alu -7 304 1 1126 75 0 0 chr2 32618642 32618775 -218069079 - AluSq/x SINE Alu -180 133 1 304 119 0 0 chr2 32618912 32618954 -218068900 - MER4E LTR ERV1 -74 692 651 290 236 71 79 chr2 32618977 32619104 -218068750 + L2 LINE L2 3180 3305 -8 2556 43 0 7 chr2 32619142 32619447 -218068407 - AluY SINE Alu -7 304 2 27 73 0 0 chr2 32619496 32619551 -218068303 + AT_rich Low_complexity Low_complexity 1 55 0 214 298 12 6 chr2 32619652 32619737 -218068117 + MIR SINE MIR 1 85 -137 323 282 58 10 chr2 32619789 32619906 -218067948 + MIR SINE MIR 37 159 -49 2191 112 7 0 chr2 32619975 32620279 -218067575 + AluY SINE Alu 1 306 -5 257 303 0 0 chr2 32620279 32620368 -218067486 + L1MC4 LINE L1 6615 6703 -1339 237 179 45 0 chr2 32620343 32620410 -218067444 - L1MCa LINE L1 -4362 2064 1995 * 336 143 0 0 chr2 32620410 32620466 -218067388 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 269 134 75 15 chr2 32620495 32620562 -218067292 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 341 254 127 8 chr2 32620687 32620813 -218067041 + MIR SINE MIR 61 201 -61 370 271 34 8 chr2 32621538 32621656 -218066198 + L1ME3A LINE L1 6042 6162 -8 491 253 77 16 chr2 32621697 32621879 -218065975 + L1ME3A LINE L1 4973 5165 -981 920 135 0 0 chr2 32621879 32622005 -218065849 + AluJo SINE Alu 1 126 -186 1355 211 33 7 chr2 32622015 32622321 -218065533 + AluJo SINE Alu 1 313 0 1619 196 72 58 chr2 32622356 32622750 -218065104 + L1ME3A LINE L1 5216 5663 -507 2279 103 0 13 chr2 32622750 32623051 -218064803 + AluSx SINE Alu 1 297 -15 1619 196 72 58 chr2 32623051 32623274 -218064580 + L1ME3A LINE L1 5663 5882 -288 933 168 18 6 chr2 32623282 32623449 -218064405 + AluJo SINE Alu 136 304 -8 302 278 217 0 chr2 32623453 32623633 -218064221 + L1ME3A LINE L1 5895 6113 -57 250 293 12 37 chr2 32623879 32623961 -218063893 - L2 LINE L2 -7 3306 3227 309 336 80 46 chr2 32624022 32624260 -218063594 - L2 LINE L2 -220 3052 2807 228 162 0 0 chr2 32624498 32624535 -218063319 - MER5A DNA MER1_type -151 38 2 651 220 46 64 chr2 32624549 32624767 -218063087 - MER58C DNA MER1_type -1 214 1 2362 98 0 3 chr2 32624794 32625100 -218062754 + AluSg1 SINE Alu 1 305 -4 228 160 20 0 chr2 32625609 32625659 -218062195 - LTR66 LTR ERVL -166 444 394 2206 95 3 3 chr2 32626413 32626709 -218061145 + AluSg SINE Alu 1 296 -14 69 99 0 0 chr2 32628070 32628293 -218059561 + GC_rich Low_complexity Low_complexity 1 223 0 212 68 0 68 chr2 32628499 32628543 -218059311 + (GGA)n Simple_repeat Simple_repeat 3 43 0 374 199 11 84 chr2 32628700 32628891 -218058963 + C-rich Low_complexity Low_complexity 1 177 0 183 164 15 104 chr2 32629549 32629616 -218058238 + MIR SINE MIR 117 177 -85 1631 168 7 26 chr2 32629885 32630189 -218057665 + AluJo SINE Alu 5 302 -10 2400 85 0 25 chr2 32630529 32630848 -218057006 - AluSx SINE Alu -1 311 1 518 258 56 26 chr2 32631127 32631297 -218056557 + MIR SINE MIR 38 212 -50 2097 114 13 3 chr2 32631837 32632135 -218055719 + AluSg SINE Alu 1 301 -9 191 143 0 24 chr2 32632135 32632177 -218055677 + (GGGA)n Simple_repeat Simple_repeat 3 43 0 478 207 81 94 chr2 32632182 32632310 -218055544 + L1MC4 LINE L1 5678 5806 -348 1556 161 31 49 chr2 32632310 32632596 -218055258 + AluJo SINE Alu 1 281 -31 2611 50 0 0 chr2 32632596 32632892 -218054962 - AluY SINE Alu -14 297 1 478 207 81 94 chr2 32632892 32633022 -218054832 + L1MC4 LINE L1 5641 5771 -383 1616 138 43 53 chr2 32633675 32633979 -218053875 + AluJo SINE Alu 1 301 -11 1948 104 14 34 chr2 32634011 32634308 -218053546 - AluSx SINE Alu -21 291 1 2446 85 0 0 chr2 32634986 32635292 -218052562 - AluSx SINE Alu -6 306 1 2282 111 7 0 chr2 32635444 32635751 -218052103 + AluSq SINE Alu 1 309 -4 1590 179 98 9 chr2 32635912 32636247 -218051607 + MLT1A1 LTR MaLR 1 365 0 1961 112 25 7 chr2 32636555 32636840 -218051014 + AluSc SINE Alu 1 290 -19 1997 144 3 23 chr2 32636847 32637152 -218050702 + AluJb SINE Alu 1 299 -13 1041 139 7 0 chr2 32637197 32637371 -218050483 - AluSg/x SINE Alu 0 306 132 836 215 13 0 chr2 32637469 32637627 -218050227 + AluSg/x SINE Alu 130 289 -23 317 234 0 43 chr2 32637630 32637642 -218050212 - L1MC4 LINE L1 -1339 6703 6692 2124 105 7 23 chr2 32637642 32637946 -218049908 + AluSq SINE Alu 1 299 -14 317 234 0 43 chr2 32637946 32638027 -218049827 - L1MC4 LINE L1 -1350 6692 6614 * 346 283 0 0 chr2 32637947 32638039 -218049815 + L1MC4 LINE L1 6614 6705 -1337 225 159 0 0 chr2 32638040 32638084 -218049770 + (TA)n Simple_repeat Simple_repeat 1 44 0 850 169 88 0 chr2 32638176 32638324 -218049530 + FRAM SINE Alu 1 155 -21 1344 199 13 55 chr2 32638326 32638633 -218049221 + AluJo SINE Alu 1 294 -18 555 224 20 20 chr2 32638661 32638813 -218049041 + L1MA10 LINE L1 6183 6334 0 190 221 106 88 chr2 32638816 32638929 -218048925 + MIR SINE MIR 138 252 -10 803 156 0 22 chr2 32638958 32639093 -218048761 + AluJo/FLAM SINE Alu 2 133 -169 1968 91 44 4 chr2 32639096 32639371 -218048483 + AluSx SINE Alu 1 286 -26 2356 103 0 3 chr2 32639505 32639815 -218048039 + AluSx SINE Alu 1 309 -3 217 176 20 0 chr2 32639899 32639950 -218047904 + T-rich Low_complexity Low_complexity 4 55 0 2180 131 0 0 chr2 32640041 32640338 -218047516 + AluSx SINE Alu 5 301 -11 2395 85 7 7 chr2 32640620 32640925 -218046929 - AluSg SINE Alu -5 305 1 532 150 71 114 chr2 32641004 32641144 -218046710 - MER20 DNA MER1_type 0 219 86 596 122 0 0 chr2 32641145 32641227 -218046627 + AluSg1 SINE Alu 1 82 -227 334 156 10 156 chr2 32641240 32641336 -218046518 - MER20 DNA MER1_type -137 82 1 466 278 108 10 chr2 32641507 32641701 -218046153 + MIR SINE MIR 50 262 0 278 284 0 37 chr2 32641753 32641834 -218046020 - MER5A DNA MER1_type -3 186 109 238 258 43 0 chr2 32642548 32642641 -218045213 - MARNA DNA Mariner -361 225 129 851 216 28 0 chr2 32642647 32642823 -218045031 + L1ME3A LINE L1 5990 6170 0 2272 104 3 0 chr2 32643293 32643582 -218044272 + AluSg SINE Alu 1 290 -20 2063 139 0 7 chr2 32643590 32643892 -218043962 + AluSg SINE Alu 1 300 -10 1699 184 7 7 chr2 32643935 32644228 -218043626 + AluJo SINE Alu 1 293 -19 1594 158 74 11 chr2 32644257 32644542 -218043312 + AluJb SINE Alu 1 303 -9 1834 122 13 69 chr2 32644618 32644942 -218042912 + AluSq SINE Alu 1 307 0 183 156 0 0 chr2 32645015 32645047 -218042807 + T-rich Low_complexity Low_complexity 1 32 0 395 100 43 250 chr2 32645047 32645103 -218042751 - HY1 scRNA scRNA -1 111 45 2002 142 17 0 chr2 32645103 32645399 -218042455 + AluSx SINE Alu 1 301 -11 395 100 43 250 chr2 32645399 32645412 -218042442 - HY1 scRNA scRNA -67 45 31 1882 106 0 4 chr2 32645412 32645658 -218042196 + AluSq SINE Alu 56 300 -13 395 100 43 250 chr2 32645658 32645727 -218042127 - HY1 scRNA scRNA -81 31 1 2514 60 7 0 chr2 32645737 32646037 -218041817 - AluY SINE Alu -9 302 1 1051 139 6 35 chr2 32646217 32646390 -218041464 - FRAM SINE Alu -9 167 1 1958 106 38 0 chr2 32646630 32646894 -218040960 + AluSc SINE Alu 1 274 -35 1362 124 0 5 chr2 32646894 32647099 -218040755 + AluSg/x SINE Alu 105 310 -301 2066 130 3 0 chr2 32647099 32647384 -218040470 + AluSx SINE Alu 1 286 -26 1362 124 0 5 chr2 32647384 32647402 -218040452 + AluSg/x SINE Alu 310 611 0 22 0 0 0 chr2 32648174 32648196 -218039658 + AT_rich Low_complexity Low_complexity 1 22 0 592 221 7 0 chr2 32648246 32648386 -218039468 - MER113 DNA MER1_type? -223 298 158 1170 181 9 19 chr2 32648408 32648458 -218039396 + AluJb SINE Alu 85 134 -178 2486 66 0 0 chr2 32648458 32648759 -218039095 + AluY SINE Alu 1 301 -10 1170 181 9 19 chr2 32648759 32648924 -218038930 + AluJb SINE Alu 134 298 -14 2156 115 16 0 chr2 32649250 32649555 -218038299 + AluSg SINE Alu 1 310 0 976 183 0 27 chr2 32649555 32649722 -218038132 + AluSg/x SINE Alu 132 295 -17 2400 101 0 0 chr2 32649722 32650030 -218037824 + AluSg SINE Alu 1 308 -2 976 183 0 27 chr2 32650030 32650048 -218037806 + AluSg/x SINE Alu 295 312 0 806 159 0 0 chr2 32650687 32650800 -218037054 + FLAM_C SINE Alu 1 113 -30 23 42 0 21 chr2 32650804 32650825 -218037029 + AT_rich Low_complexity Low_complexity 1 21 -26 2255 101 0 0 chr2 32650825 32651112 -218036742 + AluSg SINE Alu 1 287 -23 23 42 0 21 chr2 32651112 32651138 -218036716 + AT_rich Low_complexity Low_complexity 21 47 0 2214 105 10 0 chr2 32651138 32651433 -218036421 + AluSx SINE Alu 1 298 -14 2229 100 7 0 chr2 32651500 32651799 -218036055 + AluSp SINE Alu 1 301 -12 1112 253 57 64 chr2 32651974 32652329 -218035525 + L1MEc LINE L1 136 489 -5907 2593 138 34 2 chr2 32652329 32652742 -218035112 - MSTB LTR MaLR 0 426 1 1112 253 57 64 chr2 32652742 32652825 -218035029 + L1MEc LINE L1 489 571 -5825 2153 121 13 0 chr2 32652827 32653125 -218034729 + AluSq SINE Alu 2 303 -10 446 70 0 0 chr2 32653129 32653186 -218034668 + AluSg/x SINE Alu 191 247 -62 1096 164 17 59 chr2 32653186 32653424 -218034430 + AluJo SINE Alu 85 312 0 2032 99 46 11 chr2 32653432 32653714 -218034140 + AluSc SINE Alu 2 293 -16 2134 142 3 0 chr2 32653761 32654072 -218033782 + AluSx SINE Alu 1 312 0 1744 166 25 0 chr2 32654093 32654376 -218033478 - AluJb SINE Alu -11 301 12 1228 259 108 37 chr2 32654400 32654499 -218033355 + L1MEc LINE L1 1299 1389 -5007 2607 43 3 3 chr2 32654499 32654800 -218033054 + AluY SINE Alu 1 301 -10 1501 77 0 10 chr2 32654800 32654995 -218032859 + AluY SINE Alu 106 298 -13 1228 259 108 37 chr2 32654995 32655411 -218032443 + L1MEc LINE L1 1388 1852 -4544 1311 159 49 9 chr2 32655420 32655646 -218032208 - AluJb SINE Alu -18 294 60 2309 93 17 0 chr2 32655671 32655962 -218031892 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 32656057 32656078 -218031776 + AT_rich Low_complexity Low_complexity 1 21 0 307 253 24 0 chr2 32656121 32656204 -218031650 - MIR SINE MIR -140 122 38 1673 79 162 26 chr2 32656245 32656510 -218031344 - AluSx SINE Alu -1 301 1 526 214 0 0 chr2 32656547 32656650 -218031204 - AluJb SINE Alu -30 282 180 2256 111 7 0 chr2 32656749 32657056 -218030798 - AluSx SINE Alu -2 310 2 2175 84 3 78 chr2 32659067 32659254 -218028600 - AluSg SINE Alu -12 298 143 2318 76 6 47 chr2 32659254 32659571 -218028283 - AluSc SINE Alu -4 305 2 2175 84 3 78 chr2 32659571 32659705 -218028149 - AluSg SINE Alu -167 143 1 693 147 199 0 chr2 32660055 32660190 -218027664 + AluJb SINE Alu 135 296 -16 443 194 163 10 chr2 32660190 32660288 -218027566 + AluY SINE Alu 1 113 -198 22 56 0 0 chr2 32660290 32660326 -218027528 + AT_rich Low_complexity Low_complexity 1 36 0 1100 197 24 5 chr2 32660485 32660698 -218027156 + AluJo SINE Alu 86 302 -10 2481 78 0 3 chr2 32660859 32661168 -218026686 - AluY SINE Alu -3 308 1 2030 121 17 3 chr2 32661302 32661591 -218026263 + AluSx SINE Alu 1 293 -19 1498 171 65 7 chr2 32661655 32661930 -218025924 + AluJb SINE Alu 1 291 -21 1835 82 129 0 chr2 32662346 32662602 -218025252 + AluSc SINE Alu 1 289 -20 2079 133 0 0 chr2 32662792 32663093 -218024761 + AluSx SINE Alu 1 301 -11 207 257 140 103 chr2 32663093 32663154 -218024700 + MIR SINE MIR 60 117 -145 2180 142 0 0 chr2 32663154 32663463 -218024391 - AluSx SINE Alu -3 309 1 207 257 140 103 chr2 32663463 32663537 -218024317 + MIR SINE MIR 117 200 -62 1618 165 49 7 chr2 32663547 32663832 -218024022 + AluJb SINE Alu 1 297 -15 1858 160 0 14 chr2 32663930 32664241 -218023613 - AluSx SINE Alu 0 307 1 2240 80 7 10 chr2 32664642 32664931 -218022923 + AluY SINE Alu 1 288 -23 2119 123 0 17 chr2 32665053 32665355 -218022499 + AluSx SINE Alu 3 299 -13 833 219 0 0 chr2 32665503 32665667 -218022187 - FAM SINE Alu -11 174 11 806 161 0 29 chr2 32665882 32666019 -218021835 + FLAM_C SINE Alu 1 133 0 2202 107 0 3 chr2 32666068 32666358 -218021496 + AluSx SINE Alu 1 289 -23 1673 135 0 105 chr2 32666424 32666758 -218021096 + AluJb SINE Alu 1 299 -3 1915 111 76 3 chr2 32666759 32667048 -218020806 + AluSx SINE Alu 2 311 -1 23 68 0 0 chr2 32667048 32667092 -218020762 + AT_rich Low_complexity Low_complexity 1 44 0 556 112 9 47 chr2 32667105 32667212 -218020642 + L1MA4 LINE L1 6194 6296 -4 2163 86 7 14 chr2 32667245 32667535 -218020319 - AluSx SINE Alu -24 288 1 233 260 55 0 chr2 32667569 32667642 -218020212 + L1ME LINE L1 5601 5677 -444 2025 137 3 0 chr2 32667757 32668049 -218019805 - AluSx SINE Alu -19 293 1 2475 71 0 0 chr2 32668155 32668464 -218019390 + AluY SINE Alu 1 309 -2 2233 68 0 83 chr2 32668469 32668793 -218019061 + AluSg SINE Alu 2 298 -12 2177 160 87 112 chr2 32668866 32668960 -218018894 + MER68 LTR ERV1 1 96 -466 2328 66 0 69 chr2 32668960 32669279 -218018575 - AluY SINE Alu -14 297 1 2177 160 87 112 chr2 32669279 32669299 -218018555 + MER68 LTR ERV1 96 115 -447 1920 101 4 8 chr2 32669299 32669557 -218018297 + AluSg SINE Alu 29 285 -25 2177 160 87 112 chr2 32669557 32669606 -218018248 + MER68 LTR ERV1 115 164 -398 1723 172 0 0 chr2 32669606 32669918 -218017936 - AluJb SINE Alu 0 312 1 2177 160 87 112 chr2 32669918 32670252 -218017602 + MER68 LTR ERV1 164 488 -74 1642 128 0 0 chr2 32670252 32670478 -218017376 + AluSg/x SINE Alu 69 294 -16 2177 160 87 112 chr2 32670478 32670550 -218017304 + MER68 LTR ERV1 488 560 -2 1616 180 0 44 chr2 32670713 32671007 -218016847 + AluJb SINE Alu 1 281 -31 1033 78 0 0 chr2 32671010 32671138 -218016716 - AluSc SINE Alu -14 295 168 2489 70 3 0 chr2 32671432 32671732 -218016122 - AluSp SINE Alu -12 301 1 23 78 0 0 chr2 32671764 32671815 -218016039 + AT_rich Low_complexity Low_complexity 1 51 0 236 75 0 25 chr2 32672057 32672097 -218015757 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 964 196 0 6 chr2 32672099 32672262 -218015592 - AluSg/x SINE Alu -31 281 120 1961 142 0 14 chr2 32672270 32672406 -218015448 + AluSx SINE Alu 1 137 -186 2333 98 0 16 chr2 32672406 32672724 -218015130 + AluSq SINE Alu 1 313 0 1961 142 0 14 chr2 32672724 32672914 -218014940 + AluSx SINE Alu 137 323 0 669 191 0 0 chr2 32672930 32673056 -218014798 + FRAM SINE Alu 41 166 -10 564 198 11 126 chr2 32673086 32673189 -218014665 + Charlie8 DNA MER1_type 105 180 -150 1874 164 7 3 chr2 32673189 32673487 -218014367 + AluJb SINE Alu 1 299 -13 564 198 11 126 chr2 32673487 32673565 -218014289 + Charlie8 DNA MER1_type 180 265 -65 26 30 0 0 chr2 32673979 32674012 -218013842 + AT_rich Low_complexity Low_complexity 1 33 0 633 186 110 0 chr2 32674405 32674523 -218013331 - FLAM_A SINE Alu 0 133 3 1588 174 3 48 chr2 32675165 32675459 -218012395 + AluJb SINE Alu 1 281 -31 2101 127 0 13 chr2 32675626 32675926 -218011928 - AluSx SINE Alu -16 296 1 1504 270 57 29 chr2 32676044 32676578 -218011276 + MLT1H LTR MaLR 1 593 0 2251 103 7 3 chr2 32676867 32677169 -218010685 + AluSg SINE Alu 1 303 -7 1868 166 0 22 chr2 32677379 32677518 -218010336 + AluJb SINE Alu 1 142 -170 2202 100 3 13 chr2 32677518 32677819 -218010035 + AluSc SINE Alu 4 301 -8 1868 166 0 22 chr2 32677819 32677992 -218009862 + AluJb SINE Alu 142 306 -6 21 36 0 0 chr2 32678024 32678052 -218009802 + AT_rich Low_complexity Low_complexity 1 28 0 692 188 0 62 chr2 32678052 32678196 -218009658 + FLAM_C SINE Alu 3 137 -6 36 23 0 0 chr2 32678199 32678242 -218009612 + AT_rich Low_complexity Low_complexity 1 43 0 250 305 116 0 chr2 32678300 32678395 -218009459 - MIR SINE MIR -151 111 6 505 245 36 0 chr2 32678487 32678626 -218009228 + L1ME3A LINE L1 5727 5870 -300 764 164 17 0 chr2 32678638 32678754 -218009100 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 32678759 32678792 -218009062 + AT_rich Low_complexity Low_complexity 1 33 0 2434 75 3 0 chr2 32679120 32679413 -218008441 - AluSp SINE Alu -19 294 1 1866 136 7 35 chr2 32679452 32679762 -218008092 - AluSx SINE Alu -11 301 1 977 117 0 7 chr2 32679907 32680044 -218007810 + AluJo SINE Alu 6 141 -171 1947 132 3 26 chr2 32680044 32680347 -218007507 + AluJb SINE Alu 5 300 -12 232 218 13 13 chr2 32680521 32680599 -218007255 + GA-rich Low_complexity Low_complexity 1 78 0 1261 92 0 6 chr2 32681134 32681307 -218006547 - AluSg/x SINE Alu -10 300 129 27 49 0 0 chr2 32682027 32682068 -218005786 + GC_rich Low_complexity Low_complexity 1 41 0 2290 88 0 0 chr2 32683133 32683427 -218004427 - AluSg SINE Alu -16 294 1 367 200 11 22 chr2 32683537 32683627 -218004227 - MIR SINE MIR -71 191 103 2063 130 3 3 chr2 32684080 32684379 -218003475 - AluSx SINE Alu -9 303 5 2239 117 0 0 chr2 32684497 32684788 -218003066 + AluSg SINE Alu 1 291 -19 2024 137 10 13 chr2 32684801 32685114 -218002740 + AluJo SINE Alu 1 312 0 2296 112 0 0 chr2 32685167 32685471 -218002383 - AluSx SINE Alu -8 304 1 31 0 0 0 chr2 32685734 32685765 -218002089 + AT_rich Low_complexity Low_complexity 1 31 0 527 171 29 48 chr2 32685765 32685870 -218001984 - AluJo SINE Alu -21 291 189 256 188 0 0 chr2 32685870 32685918 -218001936 - AluJo SINE Alu -170 132 85 2710 45 0 0 chr2 32686076 32686386 -218001468 - AluY SINE Alu 0 311 2 2232 111 0 7 chr2 32686435 32686733 -218001121 - AluSx SINE Alu -16 296 1 1125 116 12 6 chr2 32686854 32687018 -218000836 + AluSq SINE Alu 134 298 -15 2067 136 0 10 chr2 32687037 32687345 -218000509 + AluSx SINE Alu 1 305 -7 2392 81 0 10 chr2 32687661 32687968 -217999886 - AluY SINE Alu -7 304 1 2257 110 0 7 chr2 32688178 32688477 -217999377 - AluSx SINE Alu -15 297 1 998 230 0 5 chr2 32688753 32688957 -217998897 - AluJo SINE Alu -26 286 84 4943 139 46 27 chr2 32689549 32690143 -217997711 - MER4D LTR ERV1 -1 902 284 2418 84 0 3 chr2 32690143 32690452 -217997402 - AluY SINE Alu -3 308 1 4943 139 46 27 chr2 32690452 32690741 -217997113 - MER4D LTR ERV1 -619 284 2 818 174 0 0 chr2 32691310 32691442 -217996412 - AluSq/x SINE Alu -181 132 1 742 164 9 0 chr2 32691621 32691737 -217996117 - FLAM_C SINE Alu -25 118 2 2229 184 154 28 chr2 32692062 32692607 -217995247 - MER90 LTR ERV1 0 614 1 2205 130 0 3 chr2 32692609 32692916 -217994938 - AluSx SINE Alu -6 306 1 190 194 28 0 chr2 32693052 32693088 -217994766 + L2 LINE L2 3218 3254 -18 2514 69 0 19 chr2 32693250 32693567 -217994287 + AluY SINE Alu 1 311 0 2158 119 3 13 chr2 32693650 32693961 -217993893 - AluSx SINE Alu -2 310 3 2264 125 0 0 chr2 32694007 32694311 -217993543 - AluSx SINE Alu -8 304 1 740 208 0 0 chr2 32694501 32694626 -217993228 - FLAM_C SINE Alu -12 131 7 593 210 0 0 chr2 32694871 32694971 -217992883 - FLAM_A SINE Alu -42 100 1 2401 96 0 0 chr2 32694982 32695284 -217992570 - AluSg SINE Alu -8 302 1 320 357 0 0 chr2 32695642 32695754 -217992100 - MIR SINE MIR -63 145 34 1569 177 13 57 chr2 32695963 32696069 -217991785 + AluJo SINE Alu 3 112 -200 2191 13 0 0 chr2 32696069 32696343 -217991511 - AluYa5 SINE Alu 0 311 58 1569 177 13 57 chr2 32696343 32696354 -217991500 + AluJo SINE Alu 112 122 -190 1562 129 0 17 chr2 32696354 32696586 -217991268 - AluSx SINE Alu -84 228 1 1569 177 13 57 chr2 32696586 32696767 -217991087 + AluJo SINE Alu 122 289 -23 1423 183 56 12 chr2 32696995 32697247 -217990607 - AluJb SINE Alu -45 267 5 1681 161 46 7 chr2 32697345 32697625 -217990229 + AluJb SINE Alu 1 291 -21 1342 190 20 8 chr2 32697676 32697923 -217989931 - AluJb SINE Alu -17 295 46 2358 152 63 11 chr2 32697957 32698408 -217989446 - L1M3 LINE L1 -428 5752 5281 268 288 15 0 chr2 32698462 32698528 -217989326 - MER58A DNA MER1_type -34 73 7 2155 126 0 22 chr2 32698895 32699074 -217988780 - AluY SINE Alu 0 311 141 2200 112 0 3 chr2 32699074 32699368 -217988486 - AluSg SINE Alu -16 294 2 2155 126 0 22 chr2 32699368 32699506 -217988348 - AluY SINE Alu -170 141 1 1853 101 0 4 chr2 32699678 32699926 -217987928 + AluSc SINE Alu 63 309 0 1919 105 77 11 chr2 32700117 32700403 -217987451 - AluSq SINE Alu -8 305 1 2294 92 3 3 chr2 32700525 32700819 -217987035 + AluSp SINE Alu 2 295 -18 2122 200 45 58 chr2 32700824 32701047 -217986807 - L1ME1 LINE L1 -209 5957 5733 198 71 0 0 chr2 32701047 32701075 -217986779 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2122 200 45 58 chr2 32701075 32701090 -217986764 - L1ME1 LINE L1 -433 5733 5719 2045 103 52 0 chr2 32701090 32701362 -217986492 - AluSg SINE Alu -20 290 5 2122 200 45 58 chr2 32701362 32701743 -217986111 - L1ME1 LINE L1 -447 5719 5345 410 100 0 40 chr2 32701766 32701866 -217985988 + (TA)n Simple_repeat Simple_repeat 1 96 0 2088 119 3 23 chr2 32701866 32702168 -217985686 - AluSx SINE Alu -16 296 1 290 252 38 54 chr2 32702229 32702248 -217985606 + L1MC/D LINE L1 5616 5634 -541 2177 68 39 14 chr2 32702248 32702552 -217985302 - AluY SINE Alu 0 311 1 290 252 38 54 chr2 32702552 32702692 -217985162 + L1MC/D LINE L1 5634 5768 -407 2314 108 0 7 chr2 32702692 32702998 -217984856 + AluSx SINE Alu 1 304 -8 1470 215 3 37 chr2 32703284 32703605 -217984249 - AluJb SINE Alu -2 310 1 2097 88 0 25 chr2 32703842 32704127 -217983727 + AluSg SINE Alu 1 278 -32 270 0 0 0 chr2 32704127 32704157 -217983697 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1803 159 7 26 chr2 32704263 32704565 -217983289 + AluJo SINE Alu 1 296 -16 2083 112 27 10 chr2 32704568 32704863 -217982991 + AluSx SINE Alu 1 300 -12 195 42 0 0 chr2 32705732 32705756 -217982098 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1740 163 0 66 chr2 32705772 32705949 -217981905 - AluJo SINE Alu -2 310 123 258 32 0 0 chr2 32705949 32705980 -217981874 + (TTA)n Simple_repeat Simple_repeat 1 31 0 1995 130 0 14 chr2 32705981 32706265 -217981589 - AluSx SINE Alu -25 287 8 1740 163 0 66 chr2 32706265 32706417 -217981437 - AluJo SINE Alu -188 124 1 2338 103 3 0 chr2 32706447 32706749 -217981105 + AluSp SINE Alu 1 303 -10 311 210 175 7 chr2 32706751 32706894 -217980960 - HsTC2 DNA Tc2 0 1898 1732 608 260 23 23 chr2 32706900 32707073 -217980781 - HsTC2 DNA Tc2 -1722 176 4 1151 168 134 34 chr2 32707158 32707420 -217980434 - AluJb SINE Alu -14 288 1 254 248 0 90 chr2 32707796 32707851 -217980003 - L1MC5 LINE L1 -36 7925 7867 2314 88 0 3 chr2 32707851 32708147 -217979707 - AluY SINE Alu -16 295 1 254 248 0 90 chr2 32708147 32708224 -217979630 - L1MC5 LINE L1 -94 7867 7805 961 233 48 0 chr2 32708225 32708431 -217979423 + MER58A DNA MER1_type 1 216 -8 1019 200 133 78 chr2 32708447 32709088 -217978766 - L1MC5 LINE L1 -160 7801 7126 191 324 0 0 chr2 32709260 32709328 -217978526 + MIR SINE MIR 79 146 -62 1850 112 20 0 chr2 32709329 32709624 -217978230 - AluSq SINE Alu 0 327 28 2458 69 0 7 chr2 32709625 32709929 -217977925 + AluY SINE Alu 1 302 -9 310 107 0 0 chr2 32709947 32710004 -217977850 - AluSq SINE Alu -262 40 2 2167 105 7 3 chr2 32710800 32711094 -217976760 + AluSx SINE Alu 1 295 -17 2416 58 0 32 chr2 32711095 32711408 -217976446 + AluYa5 SINE Alu 2 304 -7 1063 169 0 0 chr2 32711408 32711574 -217976280 + AluSg/x SINE Alu 135 300 -12 490 250 82 69 chr2 32711582 32711814 -217976040 + L2 LINE L2 3078 3312 -1 190 328 0 0 chr2 32711823 32711881 -217975973 + L2 LINE L2 3210 3267 -5 24 0 0 0 chr2 32711887 32711911 -217975943 + AT_rich Low_complexity Low_complexity 1 24 0 1110 105 0 0 chr2 32712296 32712439 -217975415 - AluSg/x SINE Alu -15 295 153 1506 252 76 47 chr2 32712449 32712762 -217975092 - L2 LINE L2 -234 3079 2725 2201 105 3 10 chr2 32712762 32713058 -217974796 + AluSx SINE Alu 1 294 -18 1506 252 76 47 chr2 32713058 32713298 -217974556 - L2 LINE L2 -588 2725 2493 1862 167 0 22 chr2 32713524 32713836 -217974018 + AluJo SINE Alu 1 305 -7 372 277 30 77 chr2 32713896 32714131 -217973723 - L2 LINE L2 -440 2874 2651 2218 112 0 0 chr2 32714229 32714525 -217973329 + AluSx SINE Alu 3 298 -14 2275 101 0 16 chr2 32715756 32716072 -217971782 - AluY SINE Alu 0 311 1 1632 181 15 0 chr2 32716259 32716529 -217971325 + AluJo SINE Alu 2 275 -37 27 49 0 0 chr2 32716696 32716737 -217971117 + AT_rich Low_complexity Low_complexity 1 41 0 211 220 0 0 chr2 32716802 32716852 -217971002 + T-rich Low_complexity Low_complexity 1 50 0 1785 122 104 6 chr2 32717607 32717934 -217969920 - L1MA5A LINE L1 -1 6296 5938 2693 98 16 5 chr2 32717937 32718365 -217969489 - L1MA5A LINE L1 -491 5806 5374 38474 69 7 4 chr2 32718542 32724658 -217963196 - L1PA5 LINE L1 -7 6147 11 1266 139 20 62 chr2 32725258 32725315 -217962539 + MER46A DNA MER2_type 1 59 -2672 1898 135 0 64 chr2 32725315 32725627 -217962227 - AluSx SINE Alu -20 292 1 1266 139 20 62 chr2 32725627 32725813 -217962041 + MER46A DNA MER2_type 59 234 -2 849 201 142 24 chr2 32726029 32726408 -217961446 + L1M4b LINE L1 1339 1747 -5108 280 283 33 0 chr2 32726495 32726587 -217961267 + L1ME1 LINE L1 6026 6120 -46 306 135 0 0 chr2 32726595 32726647 -217961207 - AluJb SINE Alu -7 295 244 1047 170 6 0 chr2 32726654 32726825 -217961029 - AluJb SINE Alu -140 172 1 2213 102 7 3 chr2 32726833 32727136 -217960718 - AluSc SINE Alu -5 304 1 2138 122 7 0 chr2 32727187 32727483 -217960371 - AluSx SINE Alu -14 298 1 440 251 36 109 chr2 32727493 32727740 -217960114 - HAL1 LINE L1 -48 2459 2231 21 36 0 0 chr2 32727740 32727768 -217960086 + AT_rich Low_complexity Low_complexity 1 28 0 491 215 0 18 chr2 32727796 32727959 -217959895 + (TA)n Simple_repeat Simple_repeat 1 160 0 309 270 0 22 chr2 32727966 32728055 -217959799 + L1MC4 LINE L1 6614 6700 -1342 236 217 0 12 chr2 32728086 32728169 -217959685 + (TA)n Simple_repeat Simple_repeat 1 82 0 2314 103 0 3 chr2 32728181 32728492 -217959362 - AluSg SINE Alu 0 310 1 362 133 33 56 chr2 32728548 32728728 -217959126 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 * 605 95 62 56 chr2 32728697 32729053 -217958801 + (TATAG)n Simple_repeat Simple_repeat 1 358 0 361 124 0 114 chr2 32729135 32729336 -217958518 + (TA)n Simple_repeat Simple_repeat 1 178 0 270 110 55 71 chr2 32729357 32729539 -217958315 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 302 229 92 28 chr2 32729739 32729848 -217958006 - L1MDa LINE L1 -4501 2039 1924 40 37 0 0 chr2 32729989 32730043 -217957811 + AT_rich Low_complexity Low_complexity 1 54 0 387 0 0 0 chr2 32730045 32730088 -217957766 + (TAG)n Simple_repeat Simple_repeat 1 43 0 1636 138 0 0 chr2 32730103 32730327 -217957527 - AluSx SINE Alu -88 224 1 357 129 0 0 chr2 32730327 32730389 -217957465 - L1MA1 LINE L1 -182 6120 6059 2283 114 0 0 chr2 32730421 32730720 -217957134 - AluSg SINE Alu -11 299 1 1440 141 173 0 chr2 32731210 32731459 -217956395 - AluJb SINE Alu -20 292 1 2319 108 0 3 chr2 32731635 32731940 -217955914 - AluSx SINE Alu -7 305 2 1136 108 0 0 chr2 32732007 32732165 -217955689 - AluSc SINE Alu 0 309 152 1518 159 51 48 chr2 32732197 32732492 -217955362 + AluJo SINE Alu 1 296 -16 26 50 0 0 chr2 32732591 32732631 -217955223 + AT_rich Low_complexity Low_complexity 1 40 0 2353 59 39 0 chr2 32733032 32733318 -217954536 - AluSp SINE Alu -12 301 5 28 29 0 0 chr2 32733430 32733465 -217954389 + AT_rich Low_complexity Low_complexity 1 35 0 27 49 0 0 chr2 32733931 32733972 -217953882 + AT_rich Low_complexity Low_complexity 1 41 0 1900 166 0 17 chr2 32734539 32734841 -217953013 - AluSx SINE Alu -15 297 1 1105 139 6 0 chr2 32734885 32735051 -217952803 + AluSg/x SINE Alu 124 290 -20 2362 76 20 10 chr2 32735053 32735357 -217952497 + AluSc SINE Alu 1 307 -2 24 0 0 0 chr2 32735360 32735384 -217952470 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 32735535 32735560 -217952294 + AT_rich Low_complexity Low_complexity 1 25 0 2003 159 0 0 chr2 32735603 32735905 -217951949 - AluSq SINE Alu -10 303 2 252 232 0 63 chr2 32736298 32736393 -217951461 + MER113 DNA MER1_type? 6 94 -427 347 274 145 8 chr2 32736661 32736785 -217951069 - MIR3 SINE MIR -8 200 60 507 168 88 18 chr2 32738089 32738202 -217949652 - FLAM_A SINE Alu 0 142 22 1144 256 78 44 chr2 32738460 32739192 -217948662 - HAL1 LINE L1 -379 2128 1372 2027 96 44 0 chr2 32739244 32739515 -217948339 - AluSq SINE Alu -30 283 1 2339 97 0 10 chr2 32739610 32739918 -217947936 - AluSx SINE Alu -7 305 1 727 308 60 39 chr2 32739918 32740350 -217947504 - HAL1 LINE L1 -1484 1023 583 2288 121 0 0 chr2 32740388 32740694 -217947160 - AluSx SINE Alu -4 308 3 816 148 0 23 chr2 32740737 32740865 -217946989 + FLAM_C SINE Alu 6 130 -13 5670 187 29 22 chr2 32740873 32741055 -217946799 + L1MC2 LINE L1 4199 4378 -1966 2404 82 0 0 chr2 32741055 32741347 -217946507 + AluSx SINE Alu 2 293 -19 5670 187 29 22 chr2 32741347 32743281 -217944573 + L1MC2 LINE L1 4378 6331 -13 2348 92 3 13 chr2 32743281 32743596 -217944258 - AluSp SINE Alu 0 313 2 411 292 105 50 chr2 32743687 32743864 -217943990 - HAL1 LINE L1 -1970 537 371 2252 54 0 37 chr2 32743864 32744179 -217943675 - AluY SINE Alu 0 304 1 411 292 105 50 chr2 32744179 32744504 -217943350 - HAL1 LINE L1 -2136 371 6 1862 161 9 25 chr2 32744544 32744860 -217942994 - AluJb SINE Alu -1 311 1 213 0 81 0 chr2 32745215 32745252 -217942602 + T-rich Low_complexity Low_complexity 1 40 0 1618 146 0 0 chr2 32745253 32745492 -217942362 - AluSx SINE Alu -73 239 1 2101 141 6 6 chr2 32746057 32746369 -217941485 - AluSx SINE Alu 0 312 1 2135 163 87 18 chr2 32746739 32747176 -217940678 - MLT1C LTR MaLR 0 467 1 846 140 7 29 chr2 32747327 32747463 -217940391 - FLAM_C SINE Alu 0 133 1 2025 139 3 3 chr2 32747791 32748085 -217939769 + AluJb SINE Alu 1 294 -18 1702 179 7 3 chr2 32748092 32748388 -217939466 + AluJo SINE Alu 5 301 -11 2348 102 0 0 chr2 32748511 32748814 -217939040 + AluSx SINE Alu 1 303 -9 370 310 99 107 chr2 32749199 32749583 -217938271 + L2 LINE L2 2886 3266 -6 345 270 71 40 chr2 32749588 32749714 -217938140 - MIR SINE MIR -95 167 38 2117 96 45 0 chr2 32749741 32750033 -217937821 - AluSc SINE Alu -4 305 1 2003 149 0 10 chr2 32750182 32750490 -217937364 + AluJb SINE Alu 1 305 -7 229 307 339 7 chr2 32750501 32750775 -217937079 - L3 LINE CR1 -160 1417 1053 1874 76 30 142 chr2 32750802 32751132 -217936722 + AluSp SINE Alu 2 294 -19 873 254 34 65 chr2 32751302 32751657 -217936197 - L1ME3A LINE L1 -2 6168 5825 200 299 15 0 chr2 32751878 32751945 -217935909 + L2 LINE L2 3173 3240 -73 1727 132 3 107 chr2 32752119 32752295 -217935559 - AluJb SINE Alu -10 292 164 1830 90 0 4 chr2 32752295 32752529 -217935325 + AluSg SINE Alu 1 233 -77 1727 132 3 107 chr2 32752529 32752678 -217935176 - AluJb SINE Alu -138 164 1 357 263 86 59 chr2 32752742 32752774 -217935080 + MIR3 SINE MIR 34 64 -144 2203 108 0 3 chr2 32752774 32753070 -217934784 - AluSx SINE Alu -17 295 1 357 263 86 59 chr2 32753070 32753189 -217934665 + MIR3 SINE MIR 64 189 -19 270 0 0 0 chr2 32753193 32753223 -217934631 + (TG)n Simple_repeat Simple_repeat 1 30 0 2360 54 0 0 chr2 32753223 32753503 -217934351 - AluY SINE Alu -31 280 1 686 133 0 0 chr2 32753745 32753843 -217934011 + AluSq SINE Alu 1 98 -214 1515 133 5 0 chr2 32753963 32754181 -217933673 + AluSq SINE Alu 94 312 -1 460 259 80 14 chr2 32755582 32755794 -217932060 - HAL1b LINE L1 -750 598 373 4156 149 41 37 chr2 32755829 32757339 -217930515 - L1PA16 LINE L1 -104 6062 4544 1512 226 0 41 chr2 32757339 32757620 -217930234 + L1 LINE L1 4136 4394 -1752 2389 82 0 16 chr2 32757620 32757937 -217929917 + AluSx SINE Alu 1 312 0 1512 226 0 41 chr2 32757937 32758092 -217929762 + L1 LINE L1 4394 4554 -1592 1599 137 29 4 chr2 32758468 32758709 -217929145 + AluSx SINE Alu 54 300 -12 613 156 74 25 chr2 32758715 32758837 -217929017 + AluJb SINE Alu 1 128 -184 42 0 0 0 chr2 32758843 32758885 -217928969 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 32759018 32759041 -217928813 + AT_rich Low_complexity Low_complexity 1 23 0 240 150 0 0 chr2 32760065 32760105 -217927749 - L1M4 LINE L1 -1584 4562 4523 * 1675 234 50 27 chr2 32760102 32760481 -217927373 + L1ME1 LINE L1 5551 5951 -215 2017 93 62 7 chr2 32760481 32760770 -217927084 - AluSc SINE Alu -4 305 1 1675 234 50 27 chr2 32760770 32760988 -217926866 + L1ME1 LINE L1 5951 6162 -4 1961 146 7 10 chr2 32761060 32761361 -217926493 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 32761522 32761566 -217926288 + AT_rich Low_complexity Low_complexity 1 44 0 228 145 18 2 chr2 32761784 32761950 -217925904 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 32762032 32762076 -217925778 + AT_rich Low_complexity Low_complexity 1 44 0 1990 128 17 10 chr2 32762678 32762967 -217924887 + AluSp SINE Alu 1 291 -22 1984 135 3 20 chr2 32763168 32763471 -217924383 - AluJb SINE Alu -14 298 1 312 167 0 0 chr2 32763473 32763521 -217924333 - MER58 DNA MER1_type -133 82 35 1634 173 0 33 chr2 32764351 32764657 -217923197 + AluJo SINE Alu 1 296 -16 2280 84 44 0 chr2 32764659 32764955 -217922899 + AluSg SINE Alu 1 309 -1 225 0 0 0 chr2 32765420 32765445 -217922409 + (T)n Simple_repeat Simple_repeat 1 25 0 1637 131 25 0 chr2 32765454 32765691 -217922163 - AluSx SINE Alu -69 243 1 2388 57 0 0 chr2 32765693 32766005 -217921849 - AluY SINE Alu 0 312 1 1544 176 4 11 chr2 32766005 32766283 -217921571 - AluJb SINE Alu -11 301 26 2248 100 0 17 chr2 32766464 32766602 -217921252 + AluSx SINE Alu 1 140 -172 2454 54 0 7 chr2 32766602 32766900 -217920954 + AluY SINE Alu 1 296 -15 2248 100 0 17 chr2 32766900 32767061 -217920793 + AluSx SINE Alu 140 295 -17 2086 100 3 41 chr2 32767153 32767472 -217920382 - AluSx SINE Alu -5 307 1 2059 152 52 6 chr2 32767618 32767947 -217919907 - MER2 DNA MER2_type 0 344 1 2193 84 0 75 chr2 32768133 32768465 -217919389 - AluSc SINE Alu -2 307 1 252 77 0 0 chr2 32768488 32768527 -217919327 + (TTTAA)n Simple_repeat Simple_repeat 3 41 0 1660 169 26 0 chr2 32768527 32768800 -217919054 - AluJo SINE Alu -27 285 6 2249 89 7 0 chr2 32769026 32769317 -217918537 - AluSp SINE Alu -20 293 1 266 196 59 0 chr2 32769409 32769460 -217918394 + MIR SINE MIR 188 241 -21 2258 102 0 7 chr2 32769702 32770007 -217917847 + AluSx SINE Alu 1 303 -9 1754 140 54 7 chr2 32770360 32770639 -217917215 + AluJb SINE Alu 1 292 -20 1944 153 0 3 chr2 32770829 32771123 -217916731 - AluJb SINE Alu -19 293 1 2306 77 34 3 chr2 32771393 32771690 -217916164 - AluSq SINE Alu -7 306 1 1690 116 0 0 chr2 32771869 32772093 -217915761 + AluSx SINE Alu 1 224 -88 227 183 161 11 chr2 32772095 32772188 -217915666 + L1ME4a LINE L1 6012 6118 -3 2518 61 7 0 chr2 32774115 32774411 -217913443 - AluSp SINE Alu -15 298 1 587 322 60 48 chr2 32775801 32775908 -217911946 + L1ME LINE L1 406 510 -5906 1281 184 53 70 chr2 32775908 32776207 -217911647 + AluJo SINE Alu 1 294 -18 587 322 60 48 chr2 32776207 32776562 -217911292 + L1ME LINE L1 510 874 -5542 2225 99 22 2 chr2 32777067 32777660 -217910194 + AluY SINE Alu 1 286 -25 1006 257 111 37 chr2 32777660 32778256 -217909598 + L1ME LINE L1 1212 1851 -4756 804 154 91 34 chr2 32778258 32778433 -217909421 + AluJb SINE Alu 2 186 -126 298 262 64 50 chr2 32778437 32778578 -217909276 + L1ME LINE L1 1733 1875 -4551 839 283 77 25 chr2 32778622 32779053 -217908801 + L1ME LINE L1 1957 2409 -4198 852 113 32 118 chr2 32779124 32779310 -217908544 - FRAM SINE Alu -6 170 1 1237 214 46 0 chr2 32779344 32779582 -217908272 - MER68 LTR ERV1 -10 552 304 629 154 77 8 chr2 32779593 32779710 -217908144 - MER68 LTR ERV1 -411 151 27 1734 238 81 20 chr2 32780011 32780132 -217907722 + L1MC4 LINE L1 6515 6627 -1415 2146 124 0 0 chr2 32780132 32780423 -217907431 + AluSx SINE Alu 1 291 -21 1734 238 81 20 chr2 32780423 32780574 -217907280 + L1MC4 LINE L1 6627 6767 -1275 2072 196 22 5 chr2 32780574 32780942 -217906912 - MLT1A2 LTR MaLR 0 374 1 1734 238 81 20 chr2 32780942 32781210 -217906644 + L1MC4 LINE L1 6767 7089 -953 1279 109 0 0 chr2 32781262 32781427 -217906427 + AluSx SINE Alu 1 165 -147 472 216 8 72 chr2 32781460 32781527 -217906327 + MIR SINE MIR 142 212 -50 2214 102 31 0 chr2 32781527 32781821 -217906033 - AluSg SINE Alu -7 303 1 2008 110 68 0 chr2 32781821 32782101 -217905753 - AluSq SINE Alu -13 300 1 472 216 8 72 chr2 32782101 32782157 -217905697 + MIR SINE MIR 210 258 -4 819 167 0 0 chr2 32782158 32782284 -217905570 + FLAM_C SINE Alu 1 126 -7 2104 118 3 3 chr2 32782345 32782649 -217905205 - AluSg SINE Alu -1 309 6 1521 146 175 10 chr2 32782674 32782983 -217904871 + MER46B DNA MER2_type 1 235 -1 2402 62 3 0 chr2 32783286 32783578 -217904276 - AluSx SINE Alu -18 294 2 180 206 304 11 chr2 32783581 32783673 -217904181 + MIR SINE MIR 94 212 -50 207 360 87 27 chr2 32784998 32785148 -217902706 + L2 LINE L2 2682 2840 -474 2358 76 3 0 chr2 32785148 32785449 -217902405 - AluSp SINE Alu -11 302 1 22 0 0 0 chr2 32785457 32785479 -217902375 + AT_rich Low_complexity Low_complexity 1 22 0 395 333 58 0 chr2 32785982 32786120 -217901734 + L2 LINE L2 3115 3260 -12 37 0 0 0 chr2 32786395 32786432 -217901422 + AT_rich Low_complexity Low_complexity 1 37 0 48 32 0 0 chr2 32786486 32786548 -217901306 + AT_rich Low_complexity Low_complexity 1 62 0 220 338 80 35 chr2 32786805 32787006 -217900848 - L2 LINE L2 -404 2910 2701 302 215 0 15 chr2 32787187 32787252 -217900602 - L1MC4 LINE L1 -1338 6704 6641 1532 184 23 27 chr2 32787252 32787551 -217900303 - AluJb SINE Alu -14 298 1 1465 57 0 6 chr2 32787571 32787746 -217900108 + AluY SINE Alu 1 174 -137 1914 148 0 0 chr2 32788682 32788960 -217898894 - AluSx SINE Alu -21 291 14 632 250 230 5 chr2 32789077 32789273 -217898581 + MIR SINE MIR 20 259 -3 2517 80 0 3 chr2 32789755 32790068 -217897786 - AluSp SINE Alu -1 312 1 200 323 215 0 chr2 32790201 32790294 -217897560 + L2 LINE L2 3150 3262 -10 2231 284 107 38 chr2 32790337 32790454 -217897400 + L2 LINE L2 935 1042 -2272 849 188 0 0 chr2 32790454 32790587 -217897267 - FLAM_A SINE Alu 0 133 1 2231 284 107 38 chr2 32790587 32791422 -217896432 + L2 LINE L2 1042 1953 -1361 2036 112 31 3 chr2 32791450 32791736 -217896118 - AluSg SINE Alu -14 296 3 268 256 0 13 chr2 32791766 32791844 -217896010 - L1MC4 LINE L1 -64 7978 7902 23 68 0 0 chr2 32792405 32792449 -217895405 + AT_rich Low_complexity Low_complexity 1 44 0 842 154 0 0 chr2 32792450 32792567 -217895287 - FLAM_C SINE Alu -16 117 1 2400 89 0 0 chr2 32792623 32792926 -217894928 - AluSc SINE Alu -6 303 1 757 150 144 0 chr2 32793487 32793660 -217894194 + L1MB8 LINE L1 5774 5971 -207 2039 115 18 0 chr2 32793771 32794057 -217893797 + AluSq SINE Alu 4 294 -19 597 272 60 34 chr2 32794161 32794426 -217893428 + L1MC4a LINE L1 5254 5525 -2283 2293 96 0 3 chr2 32794451 32794744 -217893110 + AluSg SINE Alu 1 292 -18 953 173 113 118 chr2 32794745 32794847 -217893007 - L1MB8 LINE L1 -10 6168 6067 2242 120 0 0 chr2 32794847 32795147 -217892707 - AluSx SINE Alu -12 300 1 953 173 113 118 chr2 32795147 32795390 -217892464 - L1MB8 LINE L1 -111 6067 5825 1752 130 93 4 chr2 32795394 32795663 -217892191 - AluSx SINE Alu -16 296 4 1671 138 11 81 chr2 32795672 32795725 -217892129 - L1MB8 LINE L1 -1094 5052 4997 1449 168 113 7 chr2 32795725 32795999 -217891855 - AluSg1 SINE Alu -2 307 5 1671 138 11 81 chr2 32795999 32796019 -217891835 - L1MB8 LINE L1 -1149 4997 4977 2622 53 0 0 chr2 32796019 32796321 -217891533 - AluY SINE Alu -9 302 1 1671 138 11 81 chr2 32796321 32796466 -217891388 - L1MB8 LINE L1 -1169 4977 4867 1949 152 3 16 chr2 32796466 32796776 -217891078 + AluSx SINE Alu 1 306 -6 1671 138 11 81 chr2 32796776 32796926 -217890928 - L1MB8 LINE L1 -1279 4867 4708 1336 215 26 49 chr2 32796926 32797233 -217890621 - AluJb SINE Alu -1 301 2 791 203 129 34 chr2 32797234 32797507 -217890347 + L1MC4a LINE L1 5511 5800 -321 792 204 62 12 chr2 32797507 32797669 -217890185 - MER5A DNA MER1_type -7 182 13 375 222 0 11 chr2 32797739 32797829 -217890025 + L1MC4a LINE L1 5871 5959 -1849 25 18 0 73 chr2 32797977 32798032 -217889822 + AT_rich Low_complexity Low_complexity 1 51 0 829 204 7 0 chr2 32798051 32798193 -217889661 + FRAM SINE Alu 1 143 -33 1712 157 16 46 chr2 32798194 32798500 -217889354 + AluJo SINE Alu 1 297 -15 2114 122 0 13 chr2 32798503 32798807 -217889047 - AluSx SINE Alu -12 300 1 644 260 28 11 chr2 32799328 32799505 -217888349 - MER104 DNA MER2_type 0 180 1 2028 123 3 7 chr2 32799659 32799952 -217887902 + AluSx SINE Alu 1 292 -20 1866 166 3 10 chr2 32799998 32800312 -217887542 - AluJo SINE Alu 0 312 1 2268 93 0 0 chr2 32800982 32801271 -217886583 + AluSg SINE Alu 1 289 -21 2223 104 0 23 chr2 32801474 32801781 -217886073 + AluSx SINE Alu 1 300 -12 32 43 0 0 chr2 32802192 32802238 -217885616 + AT_rich Low_complexity Low_complexity 1 46 0 2235 117 0 0 chr2 32802559 32802857 -217884997 + AluSx SINE Alu 1 298 -14 1498 176 60 14 chr2 32803163 32803447 -217884407 + AluJo SINE Alu 1 297 -15 2099 109 0 42 chr2 32803792 32804105 -217883749 - AluSx SINE Alu -10 302 3 1215 209 8 0 chr2 32804107 32804346 -217883508 - AluSg/x SINE Alu -6 306 66 2214 103 0 20 chr2 32804480 32804781 -217883073 + AluSx SINE Alu 1 295 -17 1719 162 10 3 chr2 32804800 32805102 -217882752 + AluSx SINE Alu 9 312 0 868 310 218 25 chr2 32805625 32806333 -217881521 + L2 LINE L2 2189 3031 -282 1835 138 65 0 chr2 32806488 32806764 -217881090 + AluSx SINE Alu 1 294 -18 682 253 125 19 chr2 32806807 32807351 -217880503 - L1ME2 LINE L1 -44 6120 5635 2183 131 0 16 chr2 32807351 32807665 -217880189 - AluSx SINE Alu -3 309 1 1632 163 37 10 chr2 32807665 32807965 -217879889 - AluJo SINE Alu -4 308 1 682 253 125 19 chr2 32807965 32808241 -217879613 - L1ME2 LINE L1 -529 5635 5390 2266 111 0 0 chr2 32808241 32808538 -217879316 + AluSx SINE Alu 1 297 -15 682 253 125 19 chr2 32808538 32808735 -217879119 - L1ME2 LINE L1 -774 5390 5215 1734 112 16 4 chr2 32808735 32808986 -217878868 - AluSx SINE Alu -58 254 1 682 253 125 19 chr2 32808986 32809261 -217878593 - L1ME2 LINE L1 -949 5215 4606 531 261 100 56 chr2 32809663 32809807 -217878047 + MIR SINE MIR 2 163 -99 829 139 0 36 chr2 32809807 32809944 -217877910 + FLAM_A SINE Alu 1 132 -1 531 261 100 56 chr2 32809944 32810048 -217877806 + MIR SINE MIR 163 261 -1 278 196 0 0 chr2 32810132 32810178 -217877676 - LTR51 LTR ERV1 -49 622 577 21 0 0 0 chr2 32810952 32810973 -217876881 + AT_rich Low_complexity Low_complexity 1 21 0 816 123 0 0 chr2 32811378 32811484 -217876370 + FLAM_C SINE Alu 24 129 -14 782 224 144 50 chr2 32813013 32813162 -217874692 - L1ME4a LINE L1 -70 6051 5918 1745 104 123 8 chr2 32813162 32813430 -217874424 - AluSg1 SINE Alu -10 299 1 782 224 144 50 chr2 32813430 32813745 -217874109 - L1ME4a LINE L1 -203 5918 5543 828 162 0 14 chr2 32813764 32813906 -217873948 - FLAM_C SINE Alu -3 140 1 780 200 0 0 chr2 32813968 32814093 -217873761 + FLAM_A SINE Alu 1 125 -8 2165 118 7 7 chr2 32814097 32814402 -217873452 + AluSq SINE Alu 1 305 -8 324 203 165 0 chr2 32814439 32814518 -217873336 - MIR SINE MIR -16 246 155 1141 198 19 0 chr2 32814568 32814780 -217873074 - MER46A DNA MER2_type -1 235 20 2265 93 3 0 chr2 32814844 32815135 -217872719 + AluSq SINE Alu 2 293 -20 22 0 0 0 chr2 32815316 32815338 -217872516 + AT_rich Low_complexity Low_complexity 1 22 0 188 281 49 24 chr2 32815988 32816070 -217871784 + MIR3 SINE MIR 79 162 -46 2555 157 43 81 chr2 32816618 32816657 -217871197 - L1MB3 LINE L1 -2 6181 6142 1951 102 0 0 chr2 32816657 32816902 -217870952 - AluSq SINE Alu -22 291 47 2555 157 43 81 chr2 32816902 32817467 -217870387 - L1MB3 LINE L1 -41 6142 5600 1972 79 54 4 chr2 32817481 32817760 -217870094 - L1MA3 LINE L1 0 6305 6013 21 0 0 0 chr2 32817876 32817897 -217869957 + AT_rich Low_complexity Low_complexity 1 21 0 1601 128 0 0 chr2 32817897 32818116 -217869738 + AluSx SINE Alu 1 219 -93 180 111 0 0 chr2 32818134 32818161 -217869693 + (CA)n Simple_repeat Simple_repeat 2 28 0 247 113 0 99 chr2 32818167 32818238 -217869616 + LTR66 LTR ERVL 402 465 -145 201 331 98 65 chr2 32818260 32818411 -217869443 + L2 LINE L2 2592 2756 -558 4527 22 41 0 chr2 32818411 32818927 -217868927 + SVA Other Other 863 1398 0 201 331 98 65 chr2 32818927 32819019 -217868835 + L2 LINE L2 2756 2844 -470 234 196 0 0 chr2 32819750 32819796 -217868058 - MER46C DNA MER2_type -292 46 1 2073 77 52 7 chr2 32820396 32820695 -217867159 - AluY SINE Alu 0 311 1 33 0 0 23 chr2 32822847 32822876 -217864978 + AT_rich Low_complexity Low_complexity 1 30 -13 1822 176 7 3 chr2 32822876 32823178 -217864676 - AluJb SINE Alu -9 303 1 33 0 0 23 chr2 32823178 32823192 -217864662 + AT_rich Low_complexity Low_complexity 30 43 0 2277 85 3 7 chr2 32823204 32823497 -217864357 + AluSg SINE Alu 1 292 -18 2156 126 0 7 chr2 32823725 32824035 -217863819 - AluSx SINE Alu -4 308 1 2322 73 17 0 chr2 32824231 32824518 -217863336 + AluY SINE Alu 1 292 -19 2090 83 6 80 chr2 32825287 32825444 -217862410 - AluSc SINE Alu -20 289 122 2257 105 3 0 chr2 32825444 32825739 -217862115 - AluSg SINE Alu -14 296 1 2090 83 6 80 chr2 32825739 32825758 -217862096 - AluSc SINE Alu -187 122 103 2437 85 3 0 chr2 32825758 32826064 -217861790 - AluSg SINE Alu -3 307 1 2090 83 6 80 chr2 32826064 32826198 -217861656 - AluSc SINE Alu -206 103 1 2269 114 0 0 chr2 32826200 32826497 -217861357 - AluSx SINE Alu -15 297 1 24 0 0 0 chr2 32826505 32826529 -217861325 + AT_rich Low_complexity Low_complexity 1 24 0 879 128 0 0 chr2 32826529 32826646 -217861208 - FLAM_C SINE Alu -16 117 1 321 145 0 72 chr2 32826657 32826726 -217861128 - Alu SINE Alu -5 297 234 907 136 21 14 chr2 32826737 32826877 -217860977 - AluSq/x SINE Alu -171 141 1 591 172 0 0 chr2 32827787 32827880 -217859974 - FLAM SINE Alu -13 130 38 292 244 105 20 chr2 32828188 32828293 -217859561 - L1ME4a LINE L1 -47 6074 5979 2325 105 3 13 chr2 32828293 32828608 -217859246 + AluSx SINE Alu 1 312 0 292 244 105 20 chr2 32828608 32828702 -217859152 - L1ME4a LINE L1 -142 5979 5818 2425 147 31 41 chr2 32828904 32829319 -217858535 - LTR57 LTR ERVL 0 411 1 565 272 98 78 chr2 32829327 32829665 -217858189 - HAL1b LINE L1 -737 611 256 2307 108 0 6 chr2 32829665 32829979 -217857875 - AluSx SINE Alu 0 312 1 565 272 98 78 chr2 32829979 32830180 -217857674 - HAL1b LINE L1 -1092 256 61 2127 119 13 16 chr2 32830643 32830953 -217856901 - AluSx SINE Alu -2 310 2 1779 152 13 23 chr2 32830954 32831257 -217856597 - AluJo SINE Alu -12 300 1 240 268 52 0 chr2 32831723 32831820 -217856034 - L1ME4a LINE L1 -295 5826 5725 1056 108 0 0 chr2 32831846 32831985 -217855869 - AluSg SINE Alu -4 306 168 747 100 0 0 chr2 32831985 32832110 -217855744 + ALR/Alpha Satellite centromeric 1 125 -65 1149 120 0 34 chr2 32832110 32832285 -217855569 - AluSg SINE Alu -141 169 1 435 279 29 0 chr2 32832285 32832425 -217855429 - L1ME4a LINE L1 -415 5706 5563 27 0 0 0 chr2 32832480 32832507 -217855347 + AT_rich Low_complexity Low_complexity 1 27 0 887 85 0 0 chr2 32832507 32832613 -217855241 - U6 snRNA snRNA -1 106 1 1970 157 0 6 chr2 32833232 32833545 -217854309 - AluJb SINE Alu -1 311 1 38 0 0 0 chr2 32833548 32833586 -217854268 + AT_rich Low_complexity Low_complexity 1 38 0 191 86 0 29 chr2 32833730 32833765 -217854089 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1084 209 50 0 chr2 32833768 32833988 -217853866 - AluJo SINE Alu -24 288 58 3118 116 34 50 chr2 32834019 32834308 -217853546 - L1P4 LINE L1 -415 5751 5459 2179 100 7 0 chr2 32834308 32834629 -217853225 + AluSx SINE Alu 1 323 0 3118 116 34 50 chr2 32834629 32834947 -217852907 - L1P4 LINE L1 -707 5459 5149 1166 277 10 37 chr2 32834947 32835247 -217852607 - AluSq SINE Alu -10 293 2 3118 116 34 50 chr2 32835247 32835270 -217852584 - L1P4 LINE L1 -1017 5149 5127 * 3539 175 11 0 chr2 32835250 32835889 -217851965 - L1 LINE L1 -1125 5021 4376 1278 128 32 41 chr2 32835891 32836110 -217851744 - AluJb SINE Alu -11 301 85 995 129 0 0 chr2 32836188 32836328 -217851526 + FLAM_C SINE Alu 1 140 -3 414 0 0 0 chr2 32836570 32836616 -217851238 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2119 118 0 0 chr2 32836616 32836895 -217850959 - AluSx SINE Alu -32 280 2 236 250 0 12 chr2 32837082 32837112 -217850742 + CT-rich Low_complexity Low_complexity 2 31 -53 1993 95 0 11 chr2 32837112 32837375 -217850479 - AluSx SINE Alu -52 260 1 236 250 0 12 chr2 32837375 32837428 -217850426 + CT-rich Low_complexity Low_complexity 31 84 0 2243 113 0 3 chr2 32837474 32837775 -217850079 - AluSx SINE Alu -12 300 1 275 149 0 0 chr2 32839148 32839195 -217848659 - L1MC3 LINE L1 -159 7626 7580 2338 93 7 7 chr2 32839195 32839497 -217848357 - AluSg SINE Alu -8 302 1 404 271 97 84 chr2 32841394 32841549 -217846305 + MIR3 SINE MIR 16 172 -36 183 269 58 0 chr2 32842206 32842258 -217845596 - L2 LINE L2 -4 3309 3255 21 0 0 0 chr2 32842837 32842858 -217844996 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr2 32843448 32843477 -217844377 + (TG)n Simple_repeat Simple_repeat 2 30 0 2338 93 10 0 chr2 32844629 32844930 -217842924 + AluSp SINE Alu 1 304 -9 888 229 182 39 chr2 32844930 32845363 -217842491 + MLT1J LTR MaLR 2 496 -15 417 252 81 0 chr2 32846064 32846187 -217841667 - L2 LINE L2 -1 3271 3139 592 266 153 62 chr2 32846266 32846748 -217841106 + HAL1 LINE L1 590 1115 -1392 1735 144 25 14 chr2 32846799 32847083 -217840771 - AluSx SINE Alu -11 301 15 1181 141 6 0 chr2 32847179 32847342 -217840512 + AluSx SINE Alu 1 164 -148 411 171 0 26 chr2 32847356 32847432 -217840422 + AluSx SINE Alu 142 215 -95 445 97 32 0 chr2 32847447 32847509 -217840345 + AluSp/q SINE Alu 205 268 -45 531 300 238 31 chr2 32847580 32848184 -217839670 - L2 LINE L2 -1059 2255 1527 535 133 0 0 chr2 32848420 32848495 -217839359 - AluS SINE Alu -237 76 2 1228 128 0 0 chr2 32848503 32848675 -217839179 - AluSg/x SINE Alu -12 298 127 2360 153 35 59 chr2 32848678 32849185 -217838669 - L1M4 LINE L1 -394 5784 5266 2351 93 0 7 chr2 32849185 32849486 -217838368 - AluSg SINE Alu -11 299 1 2360 153 35 59 chr2 32849486 32849579 -217838275 - L1M4 LINE L1 -912 5266 5197 1699 160 32 51 chr2 32849579 32849892 -217837962 - AluJb SINE Alu -5 307 1 2141 168 13 5 chr2 32849892 32850284 -217837570 - L1MC3 LINE L1 -202 7583 7189 321 169 15 0 chr2 32850280 32850345 -217837509 - L1M4 LINE L1 -3160 2986 2921 * 574 326 57 27 chr2 32850665 32850999 -217836855 - L2 LINE L2 -2233 1081 738 853 154 67 0 chr2 32851000 32851149 -217836705 + FRAM SINE Alu 1 155 -21 554 130 0 20 chr2 32851160 32851260 -217836594 + (GGAA)n Simple_repeat Simple_repeat 1 98 0 2387 205 12 48 chr2 32851265 32851337 -217836517 - L1M4 LINE L1 -3155 2991 2918 270 0 0 0 chr2 32851337 32851367 -217836487 + (TA)n Simple_repeat Simple_repeat 2 31 0 834 185 0 15 chr2 32851367 32851502 -217836352 - FLAM_C SINE Alu 0 133 1 2387 205 12 48 chr2 32851502 32851993 -217835861 - L1M4 LINE L1 -3226 2920 2447 623 137 8 76 chr2 32852006 32852110 -217835744 + L1MB3 LINE L1 6040 6135 -48 2172 103 13 16 chr2 32852110 32852421 -217835433 + AluY SINE Alu 1 310 -1 623 137 8 76 chr2 32852421 32852447 -217835407 + L1MB3 LINE L1 6135 6161 -22 1115 175 256 0 chr2 32852643 32852917 -217834937 + MLT1F1 LTR MaLR 224 567 0 21 0 0 0 chr2 32853388 32853409 -217834445 + AT_rich Low_complexity Low_complexity 1 21 0 334 210 194 32 chr2 32853816 32854068 -217833786 - L1MC5 LINE L1 -26 7935 7643 411 296 0 0 chr2 32854724 32854822 -217833032 + MIR3 SINE MIR 81 178 -30 712 212 32 41 chr2 32854943 32855201 -217832653 + L1MEc LINE L1 2163 2384 -3831 2037 123 0 0 chr2 32857108 32857385 -217830469 + AluSx SINE Alu 1 277 -35 198 0 0 0 chr2 32857391 32857413 -217830441 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 324 318 23 23 chr2 32857413 32857538 -217830316 + MIR SINE MIR 134 261 -1 334 294 165 32 chr2 32857561 32857779 -217830075 + MIR SINE MIR 16 262 0 363 324 18 0 chr2 32857879 32857990 -217829864 + MIR3 SINE MIR 84 196 -12 2160 134 0 0 chr2 32858081 32858388 -217829466 - AluSx SINE Alu -3 309 3 180 0 0 0 chr2 32858511 32858531 -217829323 + (A)n Simple_repeat Simple_repeat 1 20 0 2607 61 0 6 chr2 32859474 32859787 -217828067 - AluY SINE Alu 0 311 1 1890 221 24 101 chr2 32859794 32860165 -217827689 + L1MEc LINE L1 2908 3189 -3026 868 137 0 0 chr2 32860165 32860282 -217827572 - FLAM_C SINE Alu -16 117 1 1890 221 24 101 chr2 32860282 32860693 -217827161 + L1MEc LINE L1 3189 3630 -2585 1437 183 15 201 chr2 32860725 32860874 -217826980 + L1MEc LINE L1 3617 3792 -2423 1572 207 0 3 chr2 32860874 32861169 -217826685 + AluJo SINE Alu 1 294 -18 1437 183 15 201 chr2 32861169 32861238 -217826616 + L1MEc LINE L1 3792 3872 -2343 2185 110 0 3 chr2 32861238 32861537 -217826317 + AluSg SINE Alu 1 298 -12 1437 183 15 201 chr2 32861537 32861632 -217826222 + L1MEc LINE L1 3872 3983 -2232 2319 82 14 0 chr2 32861632 32861925 -217825929 + AluSg SINE Alu 4 300 -10 1437 183 15 201 chr2 32861925 32862079 -217825775 + L1MEc LINE L1 3983 3853 -2362 1894 154 0 0 chr2 32862079 32862364 -217825490 + AluJo SINE Alu 3 287 -25 1437 183 15 201 chr2 32862364 32862763 -217825091 + L1MEc LINE L1 3852 4324 -1891 802 171 8 0 chr2 32862807 32862930 -217824924 + FLAM_C SINE Alu 2 125 -18 541 152 0 18 chr2 32862932 32863044 -217824810 + GA-rich Low_complexity Low_complexity 3 112 0 264 211 0 0 chr2 32863061 32863113 -217824741 + AluSp SINE Alu 135 186 -117 2316 108 0 3 chr2 32863137 32863443 -217824411 + AluSx SINE Alu 1 305 -7 3054 94 48 0 chr2 32863445 32863879 -217823975 + L1MA2 LINE L1 5850 6304 0 236 226 161 21 chr2 32863888 32863981 -217823873 + MIR SINE MIR 157 262 0 2235 107 0 0 chr2 32864011 32864300 -217823554 + AluSx SINE Alu 1 289 -23 332 296 113 6 chr2 32864368 32864527 -217823327 + L3 LINE CR1 1349 1524 -53 1311 186 107 18 chr2 32864887 32865167 -217822687 - AluJo SINE Alu -7 305 1 2179 77 4 7 chr2 32865411 32865685 -217822169 - AluSp SINE Alu -2 311 39 38 39 0 0 chr2 32865685 32865737 -217822117 + AT_rich Low_complexity Low_complexity 1 52 0 201 211 0 0 chr2 32865743 32865795 -217822059 + (TA)n Simple_repeat Simple_repeat 2 53 0 1895 115 45 0 chr2 32865945 32866258 -217821596 + L1PB4 LINE L1 5815 6152 -4 1868 143 39 7 chr2 32866340 32866647 -217821207 + MER49 LTR ERV1 1 317 -606 694 150 4 22 chr2 32866647 32866905 -217820949 + AluJ SINE Alu 1 309 -3 1635 147 35 57 chr2 32866905 32867219 -217820635 + MER49 LTR ERV1 308 614 -309 515 120 49 6 chr2 32867226 32867366 -217820488 + MER30 DNA MER1_type 2 230 0 2160 87 23 26 chr2 32867366 32867675 -217820179 + MER49 LTR ERV1 607 914 -9 23 54 0 0 chr2 32870072 32870109 -217817745 + AT_rich Low_complexity Low_complexity 1 37 0 2590 41 0 0 chr2 32870846 32871138 -217816716 + AluY SINE Alu 1 292 -19 2288 97 0 0 chr2 32871267 32871557 -217816297 - AluSg SINE Alu -20 290 1 243 167 17 50 chr2 32871713 32871773 -217816081 + MIR SINE MIR 63 120 -142 2462 76 3 0 chr2 32871792 32872094 -217815760 + AluSp SINE Alu 1 303 -10 610 236 50 55 chr2 32872098 32872297 -217815557 + MER63A DNA MER1_type 8 205 -5 197 301 221 0 chr2 32872303 32872416 -217815438 + MIR SINE MIR 125 262 0 2385 102 3 0 chr2 32872723 32873027 -217814827 - AluSp SINE Alu -8 305 1 2490 79 3 0 chr2 32873350 32873655 -217814199 + AluSp SINE Alu 3 308 -5 2341 90 0 16 chr2 32873842 32874152 -217813702 + AluSc SINE Alu 1 305 -4 987 204 19 28 chr2 32874306 32874517 -217813337 + MER3 DNA MER1_type 1 209 0 289 327 35 40 chr2 32875019 32875221 -217812633 - MIR3 SINE MIR -5 203 3 2363 92 3 0 chr2 32875435 32875740 -217812114 + AluSx SINE Alu 1 306 -6 4121 116 49 80 chr2 32875837 32876646 -217811208 - LTR1 LTR ERV1 -1 784 1 1774 166 0 40 chr2 32877216 32877517 -217810337 - AluJb SINE Alu -23 289 1 1412 203 81 61 chr2 32877693 32878056 -217809798 - L1ME2 LINE L1 -13 6151 5776 2259 76 46 16 chr2 32878056 32878359 -217809495 + AluSx SINE Alu 1 312 0 1412 203 81 61 chr2 32878359 32878454 -217809400 - L1ME2 LINE L1 -388 5776 5684 1963 205 27 117 chr2 32878610 32879020 -217808834 + LTR9 LTR ERV1 37 482 -130 2344 66 0 3 chr2 32879020 32879306 -217808548 + AluY SINE Alu 1 285 -26 1963 205 27 117 chr2 32879306 32879426 -217808428 + LTR9 LTR ERV1 482 504 -108 2301 99 0 0 chr2 32879426 32879719 -217808135 - AluSc SINE Alu -16 293 1 1963 205 27 117 chr2 32879719 32879820 -217808034 + LTR9 LTR ERV1 503 612 0 2540 68 0 0 chr2 32879910 32880218 -217807636 + AluSc SINE Alu 1 308 -1 2102 139 0 3 chr2 32880602 32880904 -217806950 + AluSx SINE Alu 1 301 -11 33 0 0 0 chr2 32881026 32881059 -217806795 + AT_rich Low_complexity Low_complexity 1 33 0 463 136 0 0 chr2 32881059 32881125 -217806729 - AluS SINE Alu -246 66 1 290 299 110 0 chr2 32881344 32881471 -217806383 + MIR SINE MIR 48 188 -74 918 182 123 26 chr2 32881597 32881921 -217805933 + MLT1B LTR MaLR 1 503 -2 224 318 23 0 chr2 32881955 32882043 -217805811 + MIR SINE MIR 46 135 -73 246 317 10 29 chr2 32882127 32882231 -217805623 + MIR3 SINE MIR 101 202 -6 2432 74 3 3 chr2 32882263 32882562 -217805292 + AluSg SINE Alu 1 299 -11 2337 109 3 3 chr2 32883278 32883590 -217804264 - AluSx SINE Alu 0 312 1 354 254 48 63 chr2 32884211 32884355 -217803499 + L1ME4a LINE L1 5923 6066 -55 1755 160 3 21 chr2 32884355 32884705 -217803149 - AluSx SINE Alu 0 345 1 354 254 48 63 chr2 32884705 32884748 -217803106 + L1ME4a LINE L1 6066 6108 -13 1531 221 131 13 chr2 32884798 32885250 -217802604 + MLT1D LTR MaLR 1 505 0 1289 96 0 6 chr2 32885894 32886061 -217801793 - AluSg/x SINE Alu -9 303 138 2140 114 10 0 chr2 32886063 32886362 -217801492 - AluSq SINE Alu -11 302 1 32 26 0 0 chr2 32886436 32886475 -217801379 + AT_rich Low_complexity Low_complexity 1 39 0 421 169 35 12 chr2 32886479 32886651 -217801203 + (TA)n Simple_repeat Simple_repeat 1 176 0 258 313 47 16 chr2 32886755 32886883 -217800971 + L3 LINE CR1 1155 1286 -291 2119 136 0 3 chr2 32886971 32887265 -217800589 - AluSx SINE Alu -19 293 1 276 233 78 22 chr2 32887265 32887355 -217800499 + LTR67 LTR ERVL 10 104 -453 2212 116 0 10 chr2 32887682 32887985 -217799869 + AluSx SINE Alu 1 300 -12 1803 128 3 62 chr2 32887995 32888330 -217799524 + AluSx SINE Alu 1 317 0 1865 163 24 24 chr2 32888511 32888848 -217799006 + MER1B DNA MER1_type 1 337 0 1738 181 0 17 chr2 32888897 32889195 -217798659 - AluJo SINE Alu -19 293 1 291 200 105 9 chr2 32889203 32889308 -217798546 - L1ME4a LINE L1 -5 6116 6002 * 886 223 96 0 chr2 32889306 32889613 -217798241 - L1ME4a LINE L1 -702 5462 5136 207 0 0 0 chr2 32889624 32889647 -217798207 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 381 22 0 0 chr2 32889646 32889692 -217798162 + (GA)n Simple_repeat Simple_repeat 2 47 0 1661 101 22 9 chr2 32889709 32889937 -217797917 - AluSq SINE Alu -82 231 1 858 161 40 7 chr2 32890064 32890213 -217797641 + MLT1A1 LTR MaLR 1 154 -211 330 78 0 0 chr2 32890215 32890266 -217797588 + L1MA3 LINE L1 6255 6305 0 882 143 0 14 chr2 32890270 32890410 -217797444 + FRAM SINE Alu 33 170 -6 1229 137 64 5 chr2 32890410 32890614 -217797240 + MLT1A1 LTR MaLR 150 365 0 339 233 0 0 chr2 32890614 32890674 -217797180 - MLT1D LTR MaLR -445 60 1 436 223 191 0 chr2 32890742 32890899 -217796955 - MIR SINE MIR -24 238 52 3509 142 82 60 chr2 32890998 32891139 -217796715 - L1MB8 LINE L1 0 6178 6042 1811 158 0 14 chr2 32891139 32891423 -217796431 + AluJb SINE Alu 13 292 -20 3509 142 82 60 chr2 32891423 32892027 -217795827 - L1MB8 LINE L1 -136 6042 5417 2322 100 3 0 chr2 32892064 32892364 -217795490 + AluSg SINE Alu 1 301 -9 707 310 184 13 chr2 32892365 32893016 -217794838 - L2 LINE L2 -137 3176 2397 1967 104 43 4 chr2 32893045 32893324 -217794530 + AluSg SINE Alu 7 296 -14 7889 75 2 1 chr2 32893691 32894659 -217793195 - LTR5 LTR ERVK 0 969 1 2223 89 0 3 chr2 32894702 32895009 -217792845 + AluSc SINE Alu 1 306 0 813 216 12 6 chr2 32895009 32895171 -217792683 + AluJo/FRAM SINE Alu 134 296 -16 208 324 15 15 chr2 32895450 32895518 -217792336 + MIR SINE MIR 16 83 -125 233 320 0 31 chr2 32895610 32895707 -217792147 - MIR3 SINE MIR -45 163 70 2342 31 38 17 chr2 32897090 32897381 -217790473 - AluY SINE Alu -14 297 1 2515 44 0 38 chr2 32897498 32897818 -217790036 - AluY SINE Alu -3 308 1 836 154 7 20 chr2 32897992 32898141 -217789713 - FRAM SINE Alu 0 40 1 1882 87 0 12 chr2 32898245 32898486 -217789368 - AluY SINE Alu -20 291 54 2547 37 3 13 chr2 32898493 32898791 -217789063 - AluY SINE Alu -16 295 1 283 191 111 0 chr2 32898791 32898854 -217789000 - AluJo SINE Alu -166 136 67 * 310 169 20 5 chr2 32898845 32898903 -217788951 - Alu SINE Alu -250 51 1 2124 138 0 3 chr2 32899347 32899651 -217788203 - AluJb SINE Alu -9 303 1 1919 150 10 23 chr2 32899718 32900025 -217787829 + AluSx SINE Alu 1 303 -9 772 206 12 18 chr2 32900031 32900196 -217787658 + AluJb SINE Alu 143 306 -6 654 228 0 0 chr2 32900259 32900386 -217787468 + FLAM_A SINE Alu 1 127 -6 417 288 32 50 chr2 32900476 32900538 -217787316 + MIR SINE MIR 47 109 -153 2323 92 0 3 chr2 32900538 32900841 -217787013 - AluSg SINE Alu -8 302 1 417 288 32 50 chr2 32900841 32900905 -217786949 + MIR SINE MIR 109 173 -89 2423 54 10 3 chr2 32900905 32901202 -217786652 + AluY SINE Alu 1 299 -12 417 288 32 50 chr2 32901202 32901293 -217786561 + MIR SINE MIR 173 261 -1 2242 96 0 23 chr2 32901831 32902133 -217785721 - AluSx SINE Alu -17 295 1 305 221 42 74 chr2 32902183 32902278 -217785576 - L2 LINE L2 0 3272 3181 2039 133 155 3 chr2 32902454 32902822 -217785032 + MSTA LTR MaLR 5 428 0 506 323 141 31 chr2 32902874 32903518 -217784336 - L2 LINE L2 -358 2956 2242 4913 181 113 47 chr2 32903551 32903759 -217784095 - Charlie6 DNA MER1_type -61 3439 3246 1735 112 0 0 chr2 32903759 32903991 -217783863 - AluSg/x SINE Alu -6 306 75 4913 181 113 47 chr2 32903991 32904233 -217783621 - Charlie6 DNA MER1_type -254 3246 3021 1118 169 52 24 chr2 32904233 32904481 -217783373 + L1MD2 LINE L1 6095 6349 -10 4913 181 113 47 chr2 32904481 32904663 -217783191 - Charlie6 DNA MER1_type -479 3021 2852 2099 93 43 0 chr2 32904663 32904941 -217782913 - AluSc SINE Alu -19 290 1 4913 181 113 47 chr2 32904941 32905072 -217782782 - Charlie6 DNA MER1_type -648 2852 2731 1893 155 21 0 chr2 32905072 32905362 -217782492 + AluSx SINE Alu 1 296 -16 4913 181 113 47 chr2 32905362 32905959 -217781895 - Charlie6 DNA MER1_type -769 2731 1986 2034 107 0 4 chr2 32906636 32906906 -217780948 + AluSx SINE Alu 1 269 -43 198 0 0 0 chr2 32906906 32906928 -217780926 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 995 167 19 0 chr2 32906928 32907090 -217780764 + AluSc SINE Alu 130 294 -15 189 222 175 16 chr2 32907337 32907400 -217780454 - MIR SINE MIR -78 130 58 180 329 121 7 chr2 32908330 32908470 -217779384 + MIR3 SINE MIR 49 204 -4 24 0 0 0 chr2 32908751 32908775 -217779079 + AT_rich Low_complexity Low_complexity 1 24 0 1981 129 0 32 chr2 32909362 32909671 -217778183 + AluSx SINE Alu 1 299 -13 247 264 28 0 chr2 32909671 32909743 -217778111 - HsTC2 DNA Tc2 0 1898 1825 372 303 104 44 chr2 32909755 32910006 -217777848 + L1MEd LINE L1 327 592 -5527 347 253 61 0 chr2 32910052 32910151 -217777703 - HsTC2 DNA Tc2 -1793 105 1 21 0 0 0 chr2 32910264 32910285 -217777569 + AT_rich Low_complexity Low_complexity 1 21 0 2393 84 0 10 chr2 32910690 32910998 -217776856 + AluSc SINE Alu 1 305 -4 269 0 0 53 chr2 32911147 32911185 -217776669 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 6102 63 33 54 chr2 32911186 32913153 -217774701 - SVA Other Other -518 1383 70 240 35 0 0 chr2 32913153 32913182 -217774672 + (AGGGGG)n Simple_repeat Simple_repeat 6 34 0 1400 210 82 62 chr2 32913421 32913722 -217774132 - MLT1D LTR MaLR 0 505 193 2108 131 3 0 chr2 32913722 32914012 -217773842 - AluSq SINE Alu -22 291 1 1400 210 82 62 chr2 32914012 32914100 -217773754 - MLT1D LTR MaLR -312 193 108 2080 93 62 3 chr2 32914315 32914604 -217773250 + AluSx SINE Alu 1 306 -6 1958 217 50 35 chr2 32914628 32915229 -217772625 - L1MC4a LINE L1 -353 7455 6779 2186 110 13 0 chr2 32915229 32915530 -217772324 - AluSp SINE Alu -8 305 1 1958 217 50 35 chr2 32915530 32915595 -217772259 - L1MC4a LINE L1 -1029 6779 6716 898 119 0 0 chr2 32915595 32915713 -217772141 + FLAM_C SINE Alu 1 118 -25 180 97 0 0 chr2 32915763 32915794 -217772060 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 430 204 44 53 chr2 32915798 32915911 -217771943 - L1MC4a LINE L1 -1105 6703 6600 204 0 37 0 chr2 32916662 32916689 -217771165 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 1846 149 14 0 chr2 32916689 32916965 -217770889 - AluSx SINE Alu -1 308 3 2141 136 13 0 chr2 32916975 32917283 -217770571 - AluSx SINE Alu 0 312 1 1517 167 49 3 chr2 32917340 32917646 -217770208 - Charlie1 DNA MER1_type -162 2599 2280 1417 195 47 4 chr2 32917649 32917926 -217769928 + AluJb SINE Alu 1 289 -23 1897 119 9 59 chr2 32917947 32918095 -217769759 + AluSx SINE Alu 1 126 -186 2328 97 3 0 chr2 32918095 32918394 -217769460 + AluSp SINE Alu 2 301 -12 1897 119 9 59 chr2 32918394 32918565 -217769289 + AluSx SINE Alu 126 304 -8 232 340 71 20 chr2 32918849 32919046 -217768808 + MIR SINE MIR 46 252 -10 284 295 9 9 chr2 32919220 32919325 -217768529 - L2 LINE L2 -1035 2279 2175 1693 108 150 0 chr2 32919854 32920114 -217767740 - AluSx SINE Alu -13 299 1 2372 107 0 0 chr2 32920129 32920438 -217767416 - AluSg SINE Alu -1 309 1 417 243 115 46 chr2 32921028 32921195 -217766659 + MIR SINE MIR 28 215 -47 1675 161 33 15 chr2 32921195 32921469 -217766385 + AluJb SINE Alu 4 282 -30 417 243 115 46 chr2 32921469 32921519 -217766335 + MIR SINE MIR 215 260 -2 1443 158 98 8 chr2 32921535 32921801 -217766053 + AluJb SINE Alu 1 290 -22 1038 186 101 0 chr2 32922623 32922822 -217765032 + MER20 DNA MER1_type 1 219 0 22 70 0 0 chr2 32923074 32923117 -217764737 + AT_rich Low_complexity Low_complexity 1 43 0 197 236 18 18 chr2 32923229 32923284 -217764570 - MER5B DNA MER1_type -30 148 94 27 49 0 0 chr2 32924150 32924191 -217763663 + AT_rich Low_complexity Low_complexity 1 41 0 33 56 0 0 chr2 32924269 32924323 -217763531 + AT_rich Low_complexity Low_complexity 1 54 0 2276 87 10 13 chr2 32925755 32926064 -217761790 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr2 32926145 32926167 -217761687 + AT_rich Low_complexity Low_complexity 1 22 0 2325 91 7 0 chr2 32926222 32926518 -217761336 - AluY SINE Alu -13 298 1 2229 106 3 0 chr2 32926541 32926860 -217760994 + AluSp SINE Alu 1 320 0 2422 52 42 0 chr2 32926871 32927160 -217760694 + AluY SINE Alu 1 301 -10 1059 172 63 14 chr2 32927320 32927541 -217760313 + MER46A DNA MER2_type 5 236 0 22 80 0 0 chr2 32927595 32927645 -217760209 + AT_rich Low_complexity Low_complexity 1 50 0 2274 108 3 3 chr2 32927791 32928098 -217759756 - AluSx SINE Alu -4 308 2 865 137 0 0 chr2 32928323 32928447 -217759407 + FLAM_C SINE Alu 1 124 -19 961 196 8 106 chr2 32928511 32928721 -217759133 + MER8 DNA MER2_type 1 181 -58 1825 143 17 11 chr2 32928721 32929008 -217758846 + AluJb SINE Alu 17 305 -7 961 196 8 106 chr2 32929008 32929062 -217758792 + MER8 DNA MER2_type 181 239 0 694 100 0 40 chr2 32929184 32929284 -217758570 + 7SLRNA srpRNA srpRNA 213 308 -12 2711 39 0 0 chr2 32930316 32930627 -217757227 + AluY SINE Alu 1 311 0 235 286 12 36 chr2 32930728 32930812 -217757042 - L2 LINE L2 -8 3264 3183 2431 55 3 0 chr2 32930820 32931109 -217756745 + AluY SINE Alu 1 290 -21 240 424 0 0 chr2 32931246 32931345 -217756509 - L2 LINE L2 -221 3051 2953 23 0 0 0 chr2 32931371 32931394 -217756460 + AT_rich Low_complexity Low_complexity 1 23 0 2067 125 7 0 chr2 32931486 32931775 -217756079 - AluSx SINE Alu -21 291 1 2159 101 35 0 chr2 32931816 32932103 -217755751 - AluSx SINE Alu -15 297 1 1196 217 83 10 chr2 32932137 32932451 -217755403 + L1ME3A LINE L1 5626 5962 -208 2332 94 3 0 chr2 32932501 32932800 -217755054 + AluSp SINE Alu 1 300 -13 643 302 71 71 chr2 32933048 32933455 -217754399 - MLT1J LTR MaLR -102 409 3 2323 66 31 0 chr2 32933491 32933780 -217754074 + AluY SINE Alu 1 298 -13 771 131 0 29 chr2 32933921 32934058 -217753796 + FLAM_C SINE Alu 1 133 0 235 266 73 9 chr2 32934306 32934415 -217753439 + L1P LINE L1 5314 5429 -722 2402 74 3 3 chr2 32934804 32935101 -217752753 - AluSc SINE Alu -12 297 1 2235 94 7 3 chr2 32935168 32935455 -217752399 + AluSc SINE Alu 1 288 -21 1129 180 182 95 chr2 32935582 32935603 -217752251 + L1ME3A LINE L1 5669 5687 -483 738 160 189 17 chr2 32935603 32935778 -217752076 + MER3 DNA MER1_type 1 205 -4 1129 180 182 95 chr2 32935778 32935925 -217751929 + L1ME3A LINE L1 5687 5820 -350 1938 135 14 14 chr2 32935925 32936221 -217751633 + AluJb SINE Alu 3 298 -14 1129 180 182 95 chr2 32936221 32936512 -217751342 + L1ME3A LINE L1 5820 6169 -1 1966 124 28 11 chr2 32936518 32936800 -217751054 + AluSx SINE Alu 1 287 -25 2422 89 3 3 chr2 32937029 32937342 -217750512 + AluSp SINE Alu 1 313 0 307 191 12 0 chr2 32937561 32937623 -217750231 - Alu SINE Alu -253 47 1 2315 48 26 0 chr2 32937889 32938190 -217749664 - AluY SINE Alu 0 308 1 1071 207 24 132 chr2 32938191 32938312 -217749542 + MLT2D LTR ERVL 1 133 -281 2231 60 14 11 chr2 32938312 32938620 -217749234 + AluY SINE Alu 1 309 0 1071 207 24 132 chr2 32938620 32938961 -217748893 + MLT2D LTR ERVL 133 414 0 2139 118 0 20 chr2 32939176 32939480 -217748374 + AluSx SINE Alu 1 298 -14 632 227 164 13 chr2 32939482 32939707 -217748147 - L1ME LINE L1 -525 5641 5383 23 0 0 0 chr2 32939707 32939730 -217748124 + AT_rich Low_complexity Low_complexity 1 23 0 307 164 0 36 chr2 32939731 32939786 -217748068 - AluJo SINE Alu -13 289 237 437 72 0 72 chr2 32939797 32939866 -217747988 + LTR32 LTR ERVL 24 87 -384 1494 132 12 21 chr2 32939885 32940127 -217747727 + LTR32 LTR ERVL 232 471 0 1149 153 34 114 chr2 32940127 32940346 -217747508 - AluJo SINE Alu -71 241 45 2446 53 7 7 chr2 32940346 32940646 -217747208 + AluY SINE Alu 1 300 -11 1149 153 34 114 chr2 32940646 32940688 -217747166 - AluJo SINE Alu -267 45 1 2206 121 23 0 chr2 32940744 32941050 -217746804 + AluSq SINE Alu 1 313 0 1060 105 0 0 chr2 32941069 32941202 -217746652 + AluSq/x SINE Alu 1 133 -180 275 238 71 12 chr2 32941860 32941944 -217745910 + MIR SINE MIR 17 105 -157 23 33 0 0 chr2 32941972 32942002 -217745852 + AT_rich Low_complexity Low_complexity 1 30 0 2113 131 0 13 chr2 32942079 32942213 -217745641 + AluSg SINE Alu 1 135 -175 2104 100 0 4 chr2 32942213 32942493 -217745361 + AluSq SINE Alu 35 313 0 2113 131 0 13 chr2 32942493 32942656 -217745198 + AluSg SINE Alu 135 294 -16 202 170 43 0 chr2 32942656 32942703 -217745151 + MIR SINE MIR 155 203 -59 937 177 151 137 chr2 32942730 32943102 -217744752 + L1MC4 LINE L1 6671 7047 -995 653 153 48 4 chr2 32943177 32943304 -217744550 + L1MC4 LINE L1 7646 8041 -1 201 167 0 24 chr2 32943304 32943346 -217744508 + MIR SINE MIR 197 237 -25 2364 106 0 3 chr2 32943665 32943976 -217743878 - AluSx SINE Alu -2 310 1 818 136 42 131 chr2 32944269 32944307 -217743547 + MER20 DNA MER1_type 1 41 -178 2535 62 0 10 chr2 32944307 32944613 -217743241 - AluY SINE Alu -8 303 1 818 136 42 131 chr2 32944613 32944765 -217743089 + MER20 DNA MER1_type 41 174 -45 21 57 0 0 chr2 32944881 32944916 -217742938 + AT_rich Low_complexity Low_complexity 1 35 0 2197 114 3 3 chr2 32944941 32945239 -217742615 + AluSx SINE Alu 1 298 -14 327 128 0 0 chr2 32945392 32945439 -217742415 - AluSp SINE Alu -125 178 132 2319 88 3 3 chr2 32945446 32945740 -217742114 - AluSq SINE Alu -19 294 1 1424 113 21 125 chr2 32945759 32946095 -217741759 - AluSx SINE Alu -1 301 1 1379 203 25 21 chr2 32946311 32946621 -217741233 - AluJo SINE Alu 0 311 1 2004 135 0 3 chr2 32946724 32947041 -217740813 - AluSg SINE Alu 0 316 1 2404 88 3 3 chr2 32947530 32947837 -217740017 + AluSp SINE Alu 1 307 -6 2058 125 7 0 chr2 32947842 32948141 -217739713 + AluSx SINE Alu 1 301 0 270 253 13 0 chr2 32948369 32948448 -217739406 - HAL1 LINE L1 -699 1808 1729 1910 133 4 4 chr2 32948657 32948928 -217738926 + AluSx SINE Alu 1 271 -41 2276 97 0 10 chr2 32949029 32949338 -217738516 + AluY SINE Alu 4 309 -2 313 227 36 26 chr2 32949646 32949767 -217738087 - LTR33A LTR ERVL 0 523 431 2485 70 3 3 chr2 32949811 32950123 -217737731 + AluSx SINE Alu 1 312 0 2325 89 14 0 chr2 32950735 32951026 -217736828 + AluSx SINE Alu 10 304 -8 2118 82 7 4 chr2 32951137 32951406 -217736448 + AluSp SINE Alu 1 270 -43 405 0 0 0 chr2 32951409 32951454 -217736400 + (CA)n Simple_repeat Simple_repeat 2 46 0 189 0 0 0 chr2 32951524 32951545 -217736309 + (TG)n Simple_repeat Simple_repeat 1 21 0 850 182 6 0 chr2 32951545 32951710 -217736144 - L1MD3 LINE L1 -10 7985 7820 253 226 94 0 chr2 32951708 32951761 -217736093 - L1MC4a LINE L1 -435 7373 7316 * 825 122 29 7 chr2 32951762 32951901 -217735953 - L1MC4a LINE L1 -1421 6387 6246 972 221 146 35 chr2 32951901 32952065 -217735789 - AluJo SINE Alu 0 313 168 2199 109 10 0 chr2 32952065 32952358 -217735496 + AluSg SINE Alu 1 296 -14 972 221 146 35 chr2 32952358 32952478 -217735376 - AluJo SINE Alu -145 168 1 254 188 0 75 chr2 32952483 32952563 -217735291 - L1MC4a LINE L1 -1572 6236 6163 322 39 59 0 chr2 32952570 32952621 -217735233 + T-rich Low_complexity Low_complexity 1 54 0 686 179 0 0 chr2 32952624 32952741 -217735113 - FLAM_C SINE Alu -16 117 1 2195 93 13 22 chr2 32952789 32952967 -217734887 + AluY SINE Alu 1 176 -135 306 0 0 0 chr2 32952967 32953001 -217734853 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 2195 93 13 22 chr2 32953001 32953135 -217734719 + AluY SINE Alu 176 310 -1 2458 88 0 0 chr2 32953227 32953534 -217734320 - AluSc SINE Alu -1 308 2 392 199 59 66 chr2 32953545 32953681 -217734173 + Charlie8 DNA MER1_type 61 195 -2222 191 306 71 12 chr2 32953889 32953974 -217733880 + MIR SINE MIR 3 92 -170 744 107 90 25 chr2 32954120 32954242 -217733612 + AluSq/x SINE Alu 2 131 -182 2357 105 0 0 chr2 32954244 32954548 -217733306 + AluSx SINE Alu 1 304 -8 2503 88 0 0 chr2 32954552 32954884 -217732970 + AluY SINE Alu 2 333 0 2086 138 0 6 chr2 32954887 32955199 -217732655 + AluSx SINE Alu 1 310 -2 562 236 0 0 chr2 32955206 32955316 -217732538 + MER96B DNA MER1_type? 307 416 -1 569 305 96 61 chr2 32955317 32955651 -217732203 + L2 LINE L2 2652 2973 -340 2154 120 17 3 chr2 32955651 32955951 -217731903 - AluSx SINE Alu -8 304 1 569 305 96 61 chr2 32955951 32956246 -217731608 + L2 LINE L2 2973 3295 -18 836 153 0 0 chr2 32956253 32956384 -217731470 + FLAM_C SINE Alu 1 131 -2 2049 137 0 13 chr2 32956727 32957026 -217730828 + AluSx SINE Alu 1 295 -17 271 222 22 44 chr2 32957269 32957359 -217730495 + MER5A DNA MER1_type 4 91 -98 234 342 8 34 chr2 32957461 32957578 -217730276 - MER5A DNA MER1_type -5 184 71 378 0 0 0 chr2 32957621 32957663 -217730191 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 32957675 32957701 -217730153 + AT_rich Low_complexity Low_complexity 1 26 0 2349 86 7 0 chr2 32957782 32958074 -217729780 + AluY SINE Alu 1 294 -17 324 244 178 0 chr2 32958305 32958440 -217729414 - MIR SINE MIR -1 261 103 512 116 53 53 chr2 32958453 32958548 -217729306 + LTR47A LTR ERVL 1 95 -357 298 205 86 43 chr2 32958716 32958833 -217729021 - L1MC4 LINE L1 -5 8037 7916 2560 52 0 16 chr2 32958915 32959224 -217728630 - AluY SINE Alu -7 304 1 1194 71 0 0 chr2 32959225 32959365 -217728489 - AluSg SINE Alu -170 140 1 1865 122 7 21 chr2 32959496 32959775 -217728079 + AluSx SINE Alu 1 275 -37 1896 137 0 59 chr2 32959801 32959940 -217727914 + AluSx SINE Alu 1 147 -165 2233 75 7 14 chr2 32959940 32960245 -217727609 + AluSc SINE Alu 1 303 0 1896 137 0 59 chr2 32960245 32960425 -217727429 + AluSx SINE Alu 147 303 -9 2603 56 0 0 chr2 32960449 32960754 -217727100 + AluY SINE Alu 1 305 -6 29 0 0 0 chr2 32961183 32961212 -217726642 + AT_rich Low_complexity Low_complexity 1 29 0 2225 109 0 7 chr2 32961220 32961523 -217726331 + AluSc SINE Alu 1 301 -8 2396 95 0 0 chr2 32961525 32961829 -217726025 + AluSg SINE Alu 1 304 -6 2484 58 0 3 chr2 32961830 32962125 -217725729 + AluY SINE Alu 1 294 -17 3588 146 22 90 chr2 32962134 32962198 -217725656 - L1MB3 LINE L1 -7 6176 6109 1773 152 22 0 chr2 32962198 32962502 -217725352 + AluJo SINE Alu 1 310 0 4354 159 46 23 chr2 32962502 32962983 -217724871 - L1MC2 LINE L1 -12 6332 5864 212 0 0 35 chr2 32962983 32963012 -217724842 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2071 87 0 8 chr2 32963014 32963278 -217724576 - AluSx SINE Alu -24 288 27 1893 150 3 7 chr2 32963278 32963569 -217724285 - AluJb SINE Alu -20 292 1 4354 159 46 23 chr2 32963569 32963955 -217723899 - L1MC2 LINE L1 -479 5865 5441 3588 146 22 90 chr2 32963955 32964602 -217723252 - L1MB3 LINE L1 -73 6110 5520 2294 114 3 0 chr2 32964602 32964908 -217722946 - AluSx SINE Alu -5 307 1 3588 146 22 90 chr2 32964908 32964997 -217722857 - L1MB3 LINE L1 -663 5520 5427 25 75 0 0 chr2 32965186 32965239 -217722615 + AT_rich Low_complexity Low_complexity 1 53 0 1614 131 6 113 chr2 32965286 32965492 -217722362 - AluJb SINE Alu -8 304 144 2261 91 7 26 chr2 32965492 32965799 -217722055 - AluSp SINE Alu -12 301 1 1614 131 6 113 chr2 32965799 32965921 -217721933 - AluJb SINE Alu -168 144 11 1124 53 0 0 chr2 32966326 32966458 -217721396 - AluY SINE Alu -179 132 1 2341 97 0 7 chr2 32966472 32966772 -217721082 - AluSg SINE Alu -12 298 1 192 125 0 0 chr2 32966773 32966805 -217721049 + (TCCC)n Simple_repeat Simple_repeat 4 35 0 2573 77 0 0 chr2 32966809 32967120 -217720734 - AluY SINE Alu 0 311 1 401 78 0 0 chr2 32967137 32967201 -217720653 - Alu SINE Alu 0 312 249 1924 157 20 0 chr2 32967537 32967831 -217720023 - AluJb SINE Alu -12 300 1 2355 83 0 16 chr2 32967855 32968169 -217719685 - AluY SINE Alu -2 309 1 731 110 0 10 chr2 32968265 32968365 -217719489 - AluS SINE Alu -214 99 1 1786 132 41 27 chr2 32968398 32968534 -217719320 + AluSx SINE Alu 1 134 -178 2181 78 7 14 chr2 32968534 32968857 -217718997 + AluSc SINE Alu 1 321 0 1786 132 41 27 chr2 32968857 32969072 -217718782 + AluSx SINE Alu 134 312 0 1879 128 43 0 chr2 32969119 32969401 -217718453 - AluSg SINE Alu -16 294 1 306 0 0 0 chr2 32969502 32969536 -217718318 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1219 110 69 0 chr2 32969545 32969718 -217718136 - AluSg/x SINE Alu -24 288 104 1017 134 0 0 chr2 32969741 32969883 -217717971 - AluSq/x SINE Alu -170 142 1 2399 77 0 3 chr2 32969902 32970200 -217717654 - AluY SINE Alu -14 297 1 2251 106 3 0 chr2 32970212 32970513 -217717341 - AluSx SINE Alu -10 302 1 255 333 0 77 chr2 32970623 32970740 -217717114 + MIR SINE MIR 17 124 -138 2004 133 0 17 chr2 32970741 32970908 -217716946 - AluSx SINE Alu -15 297 136 2262 99 7 3 chr2 32970908 32971211 -217716643 - AluSc SINE Alu -5 304 1 2004 133 0 17 chr2 32971211 32971345 -217716509 - AluSx SINE Alu -176 136 1 187 279 54 54 chr2 32971387 32971498 -217716356 - MIR SINE MIR -81 181 71 1947 126 70 3 chr2 32971541 32971842 -217716012 + MER31A LTR ERV1 1 321 -164 255 279 15 0 chr2 32971850 32971918 -217715936 + MER31-int LTR ERV1 103 171 -4765 1022 152 6 12 chr2 32971932 32972096 -217715758 + FRAM SINE Alu 1 163 -13 2482 67 0 0 chr2 32972097 32972397 -217715457 + AluY SINE Alu 2 301 -10 304 91 146 0 chr2 32972425 32972480 -217715374 + MER31-int LTR ERV1 172 234 -4702 517 204 73 22 chr2 32972591 32972728 -217715126 + MER31-int LTR ERV1 611 754 -4182 365 171 23 57 chr2 32972755 32972843 -217715011 + MER31-int LTR ERV1 881 965 -3971 1557 102 0 9 chr2 32972848 32973073 -217714781 - AluSg/x SINE Alu -7 303 81 299 134 0 36 chr2 32973073 32973130 -217714724 - Alu SINE Alu -265 38 1 1435 172 35 97 chr2 32973130 32973353 -217714501 + MER31-int LTR ERV1 3683 3875 -1061 2192 99 0 50 chr2 32973353 32973675 -217714179 + AluSg1 SINE Alu 1 306 -3 1435 172 35 97 chr2 32973675 32973823 -217714031 + MER31-int LTR ERV1 3875 4031 -905 258 233 67 44 chr2 32973909 32973999 -217713855 - MIR SINE MIR -14 248 157 307 114 171 29 chr2 32974063 32974133 -217713721 + L1MD2 LINE L1 6070 6149 -210 505 220 0 0 chr2 32974135 32974235 -217713619 + L1MD2 LINE L1 6204 6303 -56 530 188 0 36 chr2 32974235 32974347 -217713507 - L1MC3 LINE L1 -348 7437 7330 21 0 0 0 chr2 32975025 32975046 -217712808 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 32975311 32975338 -217712516 + GC_rich Low_complexity Low_complexity 1 27 0 249 0 40 80 chr2 32976047 32976097 -217711757 + (TGGGGG)n Simple_repeat Simple_repeat 6 53 0 21 36 0 0 chr2 32977737 32977765 -217710089 + AT_rich Low_complexity Low_complexity 1 28 0 807 164 0 0 chr2 32977769 32977891 -217709963 - FLAM_C SINE Alu -21 122 1 184 265 147 0 chr2 32978840 32978908 -217708946 + L2 LINE L2 3200 3277 -36 192 77 0 0 chr2 32978908 32978934 -217708920 + (TG)n Simple_repeat Simple_repeat 2 27 0 1908 138 6 44 chr2 32978939 32979257 -217708597 - AluSx SINE Alu -6 306 1 5057 136 56 32 chr2 32979375 32980336 -217707518 - L1MC1 LINE L1 -2 6331 5348 2330 89 0 10 chr2 32980337 32980640 -217707214 - AluY SINE Alu -11 300 1 203 246 16 66 chr2 32980742 32980803 -217707051 + MIR SINE MIR 7 64 -198 25 0 0 0 chr2 32980807 32980832 -217707022 + AT_rich Low_complexity Low_complexity 1 25 0 440 238 157 14 chr2 32980887 32981034 -217706820 + MIR SINE MIR 88 255 -7 1825 154 34 3 chr2 32981071 32981369 -217706485 + AluJb SINE Alu 1 307 -5 402 236 121 51 chr2 32981651 32981870 -217705984 + MIR SINE MIR 17 256 -6 207 0 0 0 chr2 32982266 32982289 -217705565 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1973 89 60 11 chr2 32982294 32982563 -217705291 - AluSg SINE Alu -28 282 1 485 240 337 11 chr2 32983173 32983348 -217704506 + MIR SINE MIR 21 252 -10 2281 79 17 3 chr2 32983350 32983641 -217704213 - AluSg SINE Alu -15 295 1 1890 144 48 0 chr2 32983869 32983890 -217703964 - AluSx SINE Alu -6 306 287 264 30 0 0 chr2 32983890 32983923 -217703931 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1890 144 48 0 chr2 32983923 32984193 -217703661 - AluSx SINE Alu -25 287 1 704 257 28 56 chr2 32984254 32984503 -217703351 - HAL1 LINE L1 -2265 242 1 1672 130 8 0 chr2 32984743 32984989 -217702865 + AluJo SINE Alu 21 268 -44 2106 126 3 7 chr2 32985202 32985511 -217702343 + AluSp SINE Alu 1 308 -5 1761 138 22 4 chr2 32985562 32985837 -217702017 + AluSg SINE Alu 1 280 -30 491 207 56 101 chr2 32986089 32986268 -217701586 - MER5B DNA MER1_type 0 178 8 2017 129 0 4 chr2 32986281 32986560 -217701294 + AluSg SINE Alu 1 278 -32 230 0 33 0 chr2 32986569 32986599 -217701255 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1946 146 0 0 chr2 32986688 32986969 -217700885 - AluSx SINE Alu -26 286 6 344 282 122 19 chr2 32986999 32987155 -217700699 - L2 LINE L2 -171 3142 2971 2294 101 0 0 chr2 32987451 32987749 -217700105 - AluSx SINE Alu -13 299 2 843 148 0 0 chr2 32987847 32987969 -217699885 + FLAM_A SINE Alu 16 137 -5 373 270 0 0 chr2 32987969 32988058 -217699796 + L1MC4 LINE L1 6615 6703 -1339 191 35 0 35 chr2 32988084 32988113 -217699741 + (CA)n Simple_repeat Simple_repeat 2 29 0 470 101 0 0 chr2 32988728 32988797 -217699057 - L1MA2 LINE L1 -4 6300 6232 1632 117 0 13 chr2 32989037 32989268 -217698586 + AluJb SINE Alu 85 312 0 271 209 129 36 chr2 32989311 32989405 -217698449 - L1ME4a LINE L1 -63 6058 5945 1959 123 3 30 chr2 32989405 32989705 -217698149 - AluSx SINE Alu -20 292 1 271 209 129 36 chr2 32989705 32989749 -217698105 - L1ME4a LINE L1 -176 5945 5907 2157 120 3 3 chr2 32989817 32990126 -217697728 - AluSx SINE Alu -1 311 3 26 30 0 0 chr2 32990150 32990183 -217697671 + AT_rich Low_complexity Low_complexity 1 33 0 2466 231 21 26 chr2 32990223 32990584 -217697270 - L1ME1 LINE L1 -72 6094 5736 1647 189 50 3 chr2 32990584 32990881 -217696973 + AluJb SINE Alu 1 311 -1 2466 231 21 26 chr2 32990881 32991135 -217696719 - L1ME1 LINE L1 -430 5736 5482 1547 223 34 64 chr2 32991135 32991601 -217696253 + L1MB1 LINE L1 4538 4989 -1157 * 2442 203 122 27 chr2 32991591 32992223 -217695631 + L1MB1 LINE L1 5477 6168 0 393 194 56 23 chr2 32992239 32992368 -217695486 - L1ME1 LINE L1 -1286 4860 4727 1188 151 46 50 chr2 32992378 32992488 -217695366 - AluJo SINE Alu -69 243 134 2690 30 0 7 chr2 32992488 32992793 -217695061 - AluY SINE Alu -7 304 2 1188 151 46 50 chr2 32992793 32992920 -217694934 - AluJo SINE Alu -178 134 7 738 226 106 22 chr2 32992930 32993205 -217694649 - L1ME1 LINE L1 -1538 4608 4311 751 201 45 6 chr2 32993219 32993398 -217694456 - L1ME1 LINE L1 -1932 4214 4029 556 152 179 9 chr2 32993402 32993514 -217694340 + FLAM_A SINE Alu 1 131 -2 582 105 0 0 chr2 32993532 32993608 -217694246 - Alu SINE Alu -232 77 2 458 159 0 0 chr2 32993609 32993678 -217694176 + Tigger2 DNA MER2_type 678 746 -1972 3415 151 66 23 chr2 32993781 32993926 -217693928 - Tigger2 DNA MER2_type -2025 693 556 2361 85 0 3 chr2 32993926 32994232 -217693622 + AluY SINE Alu 1 305 -6 3415 151 66 23 chr2 32994232 32994750 -217693104 - Tigger2 DNA MER2_type -2162 556 1 1014 118 76 133 chr2 32994751 32995014 -217692840 - MER44D DNA MER2_type -91 518 1 1004 226 55 60 chr2 32995092 32995236 -217692618 - L1MC4 LINE L1 -1 8041 7898 333 0 0 0 chr2 32995236 32995273 -217692581 + (TG)n Simple_repeat Simple_repeat 2 38 0 1004 226 55 60 chr2 32995273 32995543 -217692311 - L1MC4 LINE L1 -144 7898 7629 233 195 171 37 chr2 32996017 32996099 -217691755 - MLT1J LTR MaLR -16 495 403 390 197 40 0 chr2 32996332 32996408 -217691446 - MLT1J LTR MaLR -323 188 110 21 0 0 0 chr2 32996426 32996447 -217691407 + AT_rich Low_complexity Low_complexity 1 21 0 2283 104 3 0 chr2 32996481 32996779 -217691075 - AluSx SINE Alu -13 299 1 225 371 10 0 chr2 32997560 32997657 -217690197 - L3 LINE CR1 -384 1193 1096 339 293 71 20 chr2 32997723 32997921 -217689933 - L3 LINE CR1 -631 946 739 27 0 0 0 chr2 32998147 32998174 -217689680 + AT_rich Low_complexity Low_complexity 1 27 0 1983 110 10 13 chr2 32998469 32998768 -217689086 + AluSx SINE Alu 1 298 -14 2230 108 3 3 chr2 32999255 32999562 -217688292 - AluSp SINE Alu -6 307 1 2203 129 0 0 chr2 32999563 32999866 -217687988 - AluSg SINE Alu -7 303 1 275 279 34 20 chr2 32999866 33000013 -217687841 - L1MC/D LINE L1 -1919 5889 5741 1358 271 215 14 chr2 33000020 33000661 -217687193 - LTR50 LTR ERVL -25 770 1 2098 135 0 0 chr2 33000748 33001044 -217686810 - AluSg SINE Alu -14 296 1 22 0 0 0 chr2 33001054 33001076 -217686778 + AT_rich Low_complexity Low_complexity 1 22 0 2056 98 7 0 chr2 33001076 33001352 -217686502 - AluSg SINE Alu -19 291 14 1093 289 47 26 chr2 33001431 33001557 -217686297 - ERVL LTR ERVL -440 5324 5202 2119 108 20 3 chr2 33001557 33001854 -217686000 - AluSx SINE Alu -10 302 1 1093 289 47 26 chr2 33001854 33002153 -217685701 - ERVL LTR ERVL -562 5202 4890 4038 299 84 31 chr2 33002214 33004467 -217683387 - ERVL LTR ERVL -1002 4762 2294 1427 213 24 14 chr2 33004467 33004763 -217683091 - AluJo SINE Alu -13 299 1 4038 299 84 31 chr2 33004763 33005419 -217682435 - ERVL LTR ERVL -3470 2294 1674 1284 116 62 58 chr2 33005943 33006127 -217681727 - L1MA7 LINE L1 -6 6285 6098 2149 94 24 10 chr2 33006127 33006424 -217681430 + AluSg SINE Alu 1 301 -9 1284 116 62 58 chr2 33006424 33006480 -217681374 - L1MA7 LINE L1 -193 6098 6044 351 128 0 0 chr2 33006482 33006529 -217681325 - Alu SINE Alu -261 47 1 476 118 0 0 chr2 33006536 33006604 -217681250 - L1P5 LINE L1 -376 5780 5713 21 0 0 0 chr2 33006604 33006625 -217681229 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 33007263 33007307 -217680547 + AT_rich Low_complexity Low_complexity 1 44 0 2066 116 0 60 chr2 33007719 33007886 -217679968 - AluSq SINE Alu -13 300 125 2169 108 10 3 chr2 33007886 33008182 -217679672 - AluSp SINE Alu -15 298 1 2333 98 0 0 chr2 33008185 33008491 -217679363 - AluY SINE Alu -4 307 2 2066 116 0 60 chr2 33008491 33008638 -217679216 - AluSq SINE Alu -190 123 1 1796 110 0 8 chr2 33010315 33010561 -217677293 - AluSx SINE Alu -51 261 18 1468 167 9 66 chr2 33010645 33010963 -217676891 - AluJb SINE Alu -12 300 1 1493 193 10 42 chr2 33011532 33011843 -217676011 - AluJo SINE Alu -11 301 1 207 0 0 0 chr2 33011969 33011992 -217675862 + (TA)n Simple_repeat Simple_repeat 1 23 0 1411 188 58 18 chr2 33012577 33012853 -217675001 + AluJo SINE Alu 6 292 -20 207 171 0 0 chr2 33012879 33012892 -217674962 + (CAA)n Simple_repeat Simple_repeat 2 14 -28 2180 83 3 10 chr2 33012892 33013180 -217674674 + AluY SINE Alu 1 286 -25 207 171 0 0 chr2 33013180 33013207 -217674647 + (CAA)n Simple_repeat Simple_repeat 13 42 0 409 269 60 15 chr2 33014132 33014266 -217673588 - MIR SINE MIR -1 261 122 302 270 235 0 chr2 33014281 33014396 -217673458 - MIR SINE MIR -74 188 47 1908 116 9 78 chr2 33014568 33014751 -217673103 - MER44D DNA MER2_type -1882 609 415 2226 94 0 13 chr2 33014751 33015050 -217672804 - AluSx SINE Alu -17 295 1 1908 116 9 78 chr2 33015050 33015211 -217672643 - MER44D DNA MER2_type -2076 415 19 2279 99 0 3 chr2 33015211 33015504 -217672350 + AluSq SINE Alu 1 292 -21 270 0 0 0 chr2 33015597 33015627 -217672227 + (TG)n Simple_repeat Simple_repeat 1 30 0 253 133 0 0 chr2 33015627 33015672 -217672182 - LTR66 LTR ERVL -172 438 394 267 239 0 0 chr2 33015674 33015741 -217672113 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 328 348 89 8 chr2 33016149 33016396 -217671458 + L1ME LINE L1 5558 5824 -342 24 0 0 0 chr2 33016551 33016575 -217671279 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 33016761 33016782 -217671072 + AT_rich Low_complexity Low_complexity 1 21 0 1985 138 0 0 chr2 33017098 33017408 -217670446 - AluSx SINE Alu 0 310 1 977 214 6 0 chr2 33017410 33017578 -217670276 - FAM SINE Alu -6 169 1 35 0 0 0 chr2 33017779 33017814 -217670040 + AT_rich Low_complexity Low_complexity 1 35 0 1868 149 3 23 chr2 33017814 33018116 -217669738 - AluJo SINE Alu -16 296 1 2397 87 0 0 chr2 33018359 33018659 -217669195 - AluSg SINE Alu -10 300 1 2063 123 3 7 chr2 33021951 33022251 -217665603 - AluSx SINE Alu -13 299 1 305 222 69 0 chr2 33022260 33022332 -217665522 - L1MB8 LINE L1 0 6178 6102 1965 133 20 0 chr2 33022342 33022636 -217665218 - AluSx SINE Alu -12 300 1 1700 152 69 4 chr2 33022704 33022981 -217664873 - AluJb SINE Alu -14 298 4 584 121 0 0 chr2 33023569 33023652 -217664202 + AluY SINE Alu 1 83 -227 1775 155 0 24 chr2 33024154 33024450 -217663404 + AluJb SINE Alu 1 289 -23 2326 94 10 7 chr2 33025208 33025515 -217662339 + AluSq SINE Alu 1 308 -5 2359 112 0 0 chr2 33026000 33026312 -217661542 - AluSx SINE Alu 0 312 1 780 118 39 0 chr2 33026327 33026454 -217661400 - AluSq/x SINE Alu -180 132 1 2258 102 13 3 chr2 33027195 33027500 -217660354 - AluSx SINE Alu -4 308 1 467 107 0 0 chr2 33028295 33028370 -217659484 + AluJ/FRAM SINE Alu 233 307 -5 2459 57 0 0 chr2 33028746 33029044 -217658810 - AluY SINE Alu -13 298 1 2171 98 7 3 chr2 33029088 33029383 -217658471 - AluSq SINE Alu -17 296 1 183 146 0 0 chr2 33029460 33029501 -217658353 + (T)n Simple_repeat Simple_repeat 1 41 0 1885 143 3 7 chr2 33029527 33029821 -217658033 - AluSx SINE Alu -19 293 1 693 207 0 37 chr2 33029991 33030126 -217657728 - FLAM_A SINE Alu -3 130 1 2170 132 0 3 chr2 33030259 33030570 -217657284 + AluSg SINE Alu 1 310 0 24 53 0 0 chr2 33030937 33030975 -217656879 + AT_rich Low_complexity Low_complexity 1 38 0 1843 141 10 33 chr2 33031053 33031219 -217656635 - AluSq SINE Alu -15 298 141 2306 106 3 0 chr2 33031219 33031522 -217656332 - AluSp SINE Alu -9 304 1 1843 141 10 33 chr2 33031522 33031660 -217656194 - AluSq SINE Alu -172 141 1 192 77 0 0 chr2 33031740 33031766 -217656088 + (A)n Simple_repeat Simple_repeat 1 26 0 1405 139 55 90 chr2 33031772 33032052 -217655802 + MER2 DNA MER2_type 13 280 -65 2065 116 51 0 chr2 33032052 33032346 -217655508 + AluSp SINE Alu 1 309 -4 1405 139 55 90 chr2 33032346 33032410 -217655444 + MER2 DNA MER2_type 280 345 0 2068 127 0 0 chr2 33032427 33032737 -217655117 + AluSx SINE Alu 1 310 0 309 293 108 19 chr2 33034474 33034631 -217653223 + MIR SINE MIR 56 226 -36 191 200 78 11 chr2 33034786 33034876 -217652978 + CT-rich Low_complexity Low_complexity 1 96 0 2143 116 7 3 chr2 33034876 33035178 -217652676 - AluSq SINE Alu -10 303 1 1627 173 13 46 chr2 33035178 33035485 -217652369 - AluJb SINE Alu -15 297 1 2036 154 3 0 chr2 33035814 33036119 -217651735 - AluSx SINE Alu -4 308 3 760 240 78 5 chr2 33036306 33036510 -217651344 - MIR SINE MIR -13 249 31 1209 153 0 0 chr2 33036829 33037012 -217650842 + AluSg/x SINE Alu 123 305 -7 4134 227 75 47 chr2 33037922 33038549 -217649305 - L1MEc LINE L1 -2168 4476 3868 2085 151 7 0 chr2 33038549 33038853 -217649001 - AluSx SINE Alu -6 306 1 4134 227 75 47 chr2 33038853 33039137 -217648717 - L1MEc LINE L1 -2776 3868 3593 2256 101 10 0 chr2 33039137 33039443 -217648411 - AluSc SINE Alu 0 309 1 4134 227 75 47 chr2 33039443 33040457 -217647397 - L1MEc LINE L1 -3051 3593 2532 465 291 67 21 chr2 33040701 33040981 -217646873 - L1ME3A LINE L1 -218 5952 5653 1875 111 42 17 chr2 33040981 33041269 -217646585 - AluSx SINE Alu -17 295 1 465 291 67 21 chr2 33041269 33041315 -217646539 - L1ME3A LINE L1 -517 5653 5611 1415 185 73 17 chr2 33041340 33041697 -217646157 - L1MB4 LINE L1 -12 6168 5792 2332 205 84 29 chr2 33041714 33042402 -217645452 + MER44D DNA MER2_type 8 605 0 2155 168 46 36 chr2 33042410 33042558 -217645296 - L1MB4 LINE L1 -433 5747 5602 2063 112 7 0 chr2 33042558 33042852 -217645002 - AluSq SINE Alu -17 296 1 2155 168 46 36 chr2 33042852 33043318 -217644536 - L1MB4 LINE L1 -578 5602 5127 757 244 20 34 chr2 33043307 33043602 -217644252 - L1MEc LINE L1 -5252 1290 1000 * 254 233 178 77 chr2 33043873 33044160 -217643694 - L1MEc LINE L1 -6036 610 295 702 261 89 46 chr2 33044321 33044361 -217643493 - L1M4c LINE L1 -4468 2670 2633 2386 92 0 3 chr2 33044361 33044664 -217643190 + AluSx SINE Alu 1 302 -10 702 261 89 46 chr2 33044664 33045309 -217642545 - L1M4c LINE L1 -4505 2633 1877 2222 77 0 11 chr2 33045315 33045626 -217642228 - AluSq SINE Alu 0 308 1 332 266 114 29 chr2 33045626 33045780 -217642074 - L1M4c LINE L1 -5248 1611 1471 180 0 0 0 chr2 33045780 33045800 -217642054 + (TG)n Simple_repeat Simple_repeat 2 21 0 332 266 114 29 chr2 33045800 33045941 -217641913 - L1M4c LINE L1 -5388 1471 1286 417 250 62 8 chr2 33046842 33046970 -217640884 + MIR SINE MIR 127 261 -1 23 33 0 0 chr2 33047341 33047371 -217640483 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 33048218 33048254 -217639600 + AT_rich Low_complexity Low_complexity 1 36 0 195 42 0 0 chr2 33048843 33048867 -217638987 + (T)n Simple_repeat Simple_repeat 1 24 0 2404 106 0 0 chr2 33049224 33049536 -217638318 - AluSx SINE Alu 0 312 1 1343 287 155 26 chr2 33049832 33050175 -217637679 - L2 LINE L2 -102 3211 2914 2023 133 3 7 chr2 33050175 33050468 -217637386 + AluSx SINE Alu 2 293 -19 1343 287 155 26 chr2 33050468 33050515 -217637339 - L2 LINE L2 -399 2914 2874 1880 185 0 10 chr2 33050515 33050818 -217637036 + AluJb SINE Alu 1 300 -12 1343 287 155 26 chr2 33050818 33051320 -217636534 - L2 LINE L2 -439 2874 2190 182 211 0 26 chr2 33051348 33051386 -217636468 + MER5A DNA MER1_type 59 95 -94 1172 165 80 88 chr2 33052465 33052614 -217635240 - MER2 DNA MER2_type -5 340 191 1649 158 7 47 chr2 33052614 33052911 -217634943 + AluJo SINE Alu 9 293 -19 1172 165 80 88 chr2 33052911 33053100 -217634754 - MER2 DNA MER2_type -154 191 5 220 300 0 0 chr2 33053106 33053166 -217634688 + (TG)n Simple_repeat Simple_repeat 1 60 0 231 296 57 0 chr2 33053178 33053266 -217634588 - MER5B DNA MER1_type -80 98 6 1929 118 66 0 chr2 33054614 33054903 -217632951 - AluSx SINE Alu -4 308 1 1709 190 3 7 chr2 33054920 33055230 -217632624 - AluSx SINE Alu -3 309 1 1405 138 30 9 chr2 33055585 33055816 -217632038 - MER46A DNA MER2_type 0 236 1 185 227 182 0 chr2 33055863 33055907 -217631947 - L2 LINE L2 -33 3239 3188 895 131 0 0 chr2 33056002 33056132 -217631722 - FLAM_C SINE Alu -3 130 1 2386 62 7 10 chr2 33056596 33056900 -217630954 - AluY SINE Alu -8 303 1 558 228 214 34 chr2 33056903 33057109 -217630745 - MIR SINE MIR -18 244 2 204 208 0 42 chr2 33057110 33057158 -217630696 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 255 61 0 0 chr2 33057216 33057249 -217630605 + (TG)n Simple_repeat Simple_repeat 2 34 0 2083 119 3 13 chr2 33057916 33058218 -217629636 - AluSx SINE Alu -13 299 1 1665 169 11 7 chr2 33058792 33059099 -217628755 - AluSg SINE Alu 0 309 2 188 355 55 0 chr2 33059604 33059714 -217628140 + L2 LINE L2 3167 3282 -31 595 263 0 0 chr2 33059747 33059880 -217627974 + FLAM_A SINE Alu 1 133 0 1634 163 28 31 chr2 33060911 33061237 -217626617 - MER44D DNA MER2_type -4 605 11 21 0 0 0 chr2 33062072 33062093 -217625761 + AT_rich Low_complexity Low_complexity 1 21 0 1320 162 142 3 chr2 33062138 33062440 -217625414 + L1MA4 LINE L1 5952 6295 -5 530 167 0 0 chr2 33062644 33062728 -217625126 + AluJ/FLAM SINE Alu 1 84 -228 2306 88 7 0 chr2 33063900 33064196 -217623658 - AluSp SINE Alu -15 298 1 6402 79 19 33 chr2 33064792 33066733 -217621121 - SVA Other Other -520 1386 7 2091 76 62 4 chr2 33068237 33068513 -217619341 + AluY SINE Alu 1 292 -19 506 348 128 25 chr2 33068592 33068710 -217619144 + L2 LINE L2 2409 2513 -801 1825 177 30 15 chr2 33068710 33069049 -217618805 + MER2 DNA MER2_type 1 344 0 506 348 128 25 chr2 33069049 33069338 -217618516 + L2 LINE L2 2513 2858 -456 3515 220 164 4 chr2 33069358 33070550 -217617304 + Charlie1a DNA MER1_type 3 1454 -1 184 287 202 0 chr2 33070833 33070927 -217616927 + L2 LINE L2 3192 3304 -9 2302 78 7 10 chr2 33073137 33073443 -217614411 + AluY SINE Alu 1 305 -6 1476 123 0 26 chr2 33073455 33073682 -217614172 + AluSg/x SINE Alu 77 297 -15 642 241 113 126 chr2 33074021 33074594 -217613260 - L1ME3A LINE L1 -18 6221 5656 257 286 36 0 chr2 33074696 33074808 -217613046 - L1ME3A LINE L1 -3433 2782 2667 895 241 41 57 chr2 33074913 33074972 -217612882 - L1MEc LINE L1 -3691 2524 2466 591 202 65 0 chr2 33074972 33075096 -217612758 - FLAM_A SINE Alu -1 132 1 895 241 41 57 chr2 33075096 33075485 -217612369 - L1MEc LINE L1 -3749 2466 2132 21 0 0 0 chr2 33075660 33075681 -217612173 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 33075989 33076011 -217611843 + AT_rich Low_complexity Low_complexity 1 22 0 278 219 45 120 chr2 33076218 33076460 -217611394 - L1MEc LINE L1 -4925 1471 1248 1675 186 16 7 chr2 33076724 33077030 -217610824 - AluSx SINE Alu -3 309 1 556 191 66 95 chr2 33077132 33077511 -217610343 - L1MB7 LINE L1 -77 6107 5634 651 234 75 108 chr2 33077523 33078174 -217609680 - L1MB7 LINE L1 -1441 4705 4076 453 58 14 72 chr2 33078174 33078313 -217609541 + (TA)n Simple_repeat Simple_repeat 2 132 0 2157 112 10 0 chr2 33078313 33078617 -217609237 - AluSx SINE Alu -5 307 1 1083 134 0 0 chr2 33079034 33079213 -217608641 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1579 172 42 0 chr2 33079245 33079384 -217608470 - AluSx SINE Alu -39 273 141 360 0 0 0 chr2 33079384 33079424 -217608430 + (TG)n Simple_repeat Simple_repeat 2 41 0 1579 172 42 0 chr2 33079424 33079546 -217608308 - AluSx SINE Alu -171 141 1 211 284 233 0 chr2 33079762 33079878 -217607976 + MIR SINE MIR 18 160 -102 25 0 0 0 chr2 33080081 33080106 -217607748 + AT_rich Low_complexity Low_complexity 1 25 0 2025 131 7 0 chr2 33080715 33081013 -217606841 + AluSx SINE Alu 1 300 -12 2012 137 9 49 chr2 33081829 33082179 -217605675 + MER1B DNA MER1_type 2 337 0 183 139 0 0 chr2 33082580 33082616 -217605238 + (CAG)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr2 33083221 33083245 -217604609 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 33083290 33083310 -217604544 + (T)n Simple_repeat Simple_repeat 1 20 0 786 190 0 65 chr2 33084854 33084878 -217602976 - FAM SINE Alu -139 172 148 2352 77 0 0 chr2 33084878 33085177 -217602677 + AluY SINE Alu 1 299 -12 786 190 0 65 chr2 33085177 33085336 -217602518 - FAM SINE Alu -163 148 1 23 54 0 0 chr2 33085843 33085880 -217601974 + AT_rich Low_complexity Low_complexity 1 37 0 1999 116 0 7 chr2 33090133 33090409 -217597445 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 33091289 33091311 -217596543 + AT_rich Low_complexity Low_complexity 1 22 0 184 286 0 36 chr2 33091390 33091446 -217596408 + MIR SINE MIR 91 144 -64 396 0 0 0 chr2 33091747 33091791 -217596063 + (TG)n Simple_repeat Simple_repeat 2 45 0 1764 171 3 13 chr2 33091792 33092096 -217595758 - AluJo SINE Alu -11 301 1 25 51 0 0 chr2 33092186 33092225 -217595629 + AT_rich Low_complexity Low_complexity 1 39 0 500 262 47 33 chr2 33092496 33092710 -217595144 + L1MC4 LINE L1 7683 7899 -143 1035 142 228 14 chr2 33093002 33093221 -217594633 + AluSg1 SINE Alu 35 300 -9 985 223 93 30 chr2 33093450 33093792 -217594062 + L1MD2 LINE L1 5972 7798 -10 25 90 0 0 chr2 33093916 33093983 -217593871 + AT_rich Low_complexity Low_complexity 1 67 0 888 161 0 0 chr2 33095657 33095794 -217592060 + FLAM_C SINE Alu 1 137 -6 24 0 0 0 chr2 33095958 33095982 -217591872 + AT_rich Low_complexity Low_complexity 1 24 0 1984 112 17 7 chr2 33096101 33096396 -217591458 + AluSc SINE Alu 3 300 -9 418 333 102 27 chr2 33097085 33097310 -217590544 + MIR SINE MIR 14 255 -7 218 213 0 0 chr2 33097984 33098031 -217589823 + T-rich Low_complexity Low_complexity 1 47 0 2196 119 0 3 chr2 33098669 33098980 -217588874 - AluSg SINE Alu 0 310 1 2308 103 0 0 chr2 33099525 33099827 -217588027 + AluY SINE Alu 1 302 -9 1921 149 3 0 chr2 33100961 33101257 -217586597 - AluSx SINE Alu -15 297 1 21 36 0 0 chr2 33101300 33101328 -217586526 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 33101352 33101376 -217586478 + AT_rich Low_complexity Low_complexity 1 24 0 1653 236 96 31 chr2 33101421 33101997 -217585857 - L1MC4 LINE L1 -141 7901 7289 390 205 0 7 chr2 33102022 33102104 -217585750 - AluSx SINE Alu -28 272 197 634 170 0 0 chr2 33102110 33102216 -217585638 - AluSx SINE Alu -207 106 1 1907 124 19 10 chr2 33102311 33102618 -217585236 + AluSx SINE Alu 1 310 -2 345 178 0 75 chr2 33102704 33102741 -217585113 - L1MB3 LINE L1 0 6183 6145 598 220 23 15 chr2 33102741 33102873 -217584981 - FLAM_A SINE Alu 0 133 1 345 178 0 75 chr2 33102873 33102942 -217584912 - L1MB3 LINE L1 -38 6145 6085 1291 276 108 25 chr2 33102950 33103440 -217584414 - L1MC4 LINE L1 -1040 7002 6472 827 168 13 0 chr2 33104284 33104433 -217583421 - MER58B DNA MER1_type -8 333 183 208 319 239 0 chr2 33104890 33105003 -217582851 - L3 LINE CR1 -50 1527 1388 515 266 18 0 chr2 33105202 33105315 -217582539 - MER5B DNA MER1_type -63 115 1 1142 194 5 14 chr2 33106102 33106318 -217581536 + AluJo SINE Alu 5 218 -94 26 30 0 0 chr2 33107060 33107093 -217580761 + AT_rich Low_complexity Low_complexity 1 33 0 40 73 0 0 chr2 33107466 33107548 -217580306 + AT_rich Low_complexity Low_complexity 1 82 0 934 153 89 0 chr2 33107569 33107726 -217580128 + AluSx SINE Alu 1 171 -141 1770 137 47 0 chr2 33108305 33108582 -217579272 + AluSx SINE Alu 1 290 -22 268 258 175 0 chr2 33110282 33110379 -217577475 - L2 LINE L2 0 3313 3200 226 348 22 0 chr2 33111129 33111221 -217576633 + MIR SINE MIR 57 150 -112 2309 82 0 0 chr2 33112272 33112565 -217575289 - AluSc SINE Alu -16 293 1 1400 168 7 56 chr2 33112659 33112963 -217574891 + AluJo SINE Alu 1 289 -23 1076 274 56 59 chr2 33113557 33113880 -217573974 - L1MEc LINE L1 -896 5319 4997 2131 72 35 14 chr2 33113880 33114170 -217573684 - AluY SINE Alu -15 296 1 1076 274 56 59 chr2 33114170 33114273 -217573581 - L1MEc LINE L1 -1218 4997 4895 1843 152 14 0 chr2 33114273 33114563 -217573291 - AluSx SINE Alu -18 294 1 1076 274 56 59 chr2 33114563 33114849 -217573005 - L1MEc LINE L1 -1320 4895 4608 739 302 24 39 chr2 33114842 33115223 -217572631 - L1MEc LINE L1 -1925 4290 3916 * 414 286 25 34 chr2 33115224 33115343 -217572511 - FLAM_A SINE Alu -11 122 5 428 265 211 8 chr2 33115455 33115848 -217572006 - L1MEc LINE L1 -2544 3671 3199 693 247 76 35 chr2 33115927 33116100 -217571754 - L1MEc LINE L1 -4124 2272 2108 1394 175 52 28 chr2 33116100 33116391 -217571463 - AluSx SINE Alu -14 298 1 693 247 76 35 chr2 33116391 33116586 -217571268 - L1MEc LINE L1 -4288 2108 1889 23 0 0 0 chr2 33116595 33116618 -217571236 + AT_rich Low_complexity Low_complexity 1 23 0 1487 198 24 3 chr2 33116631 33116919 -217570935 - AluSg SINE Alu -16 294 1 848 138 0 22 chr2 33116919 33117057 -217570797 - AluSq/x SINE Alu -177 135 1 312 70 0 0 chr2 33117539 33117582 -217570272 + (TC)n Simple_repeat Simple_repeat 2 44 0 503 148 0 0 chr2 33118379 33118460 -217569394 - AluSq SINE Alu -99 214 134 1258 111 25 64 chr2 33118460 33118634 -217569220 - AluSg/x SINE Alu -14 298 134 2152 123 7 3 chr2 33118634 33118944 -217568910 - AluSx SINE Alu -1 311 1 1258 111 25 64 chr2 33118944 33119004 -217568850 - AluSg/x SINE Alu -178 134 73 832 102 0 0 chr2 33119602 33119710 -217568144 - AluSq/x SINE Alu -205 108 1 2238 89 7 0 chr2 33121448 33121761 -217566093 - AluSq SINE Alu 0 315 1 1304 172 94 4 chr2 33121924 33122069 -217565785 - AluSx SINE Alu -21 291 160 399 21 0 0 chr2 33122069 33122117 -217565737 + (TG)n Simple_repeat Simple_repeat 2 49 0 1304 172 94 4 chr2 33122117 33122238 -217565616 - AluSx SINE Alu -152 160 1 2395 63 0 16 chr2 33122425 33122753 -217565101 + AluY SINE Alu 1 311 0 1586 167 24 10 chr2 33123899 33124187 -217563667 - AluJo SINE Alu -20 292 1 284 300 164 0 chr2 33124788 33124928 -217562926 + MIR SINE MIR 11 173 -89 1961 161 0 13 chr2 33125187 33125503 -217562351 + AluSx SINE Alu 1 312 0 243 0 0 0 chr2 33126316 33126343 -217561511 + (T)n Simple_repeat Simple_repeat 1 27 0 1779 118 65 0 chr2 33126842 33127121 -217560733 + AluY SINE Alu 1 297 -14 2050 140 0 0 chr2 33127292 33127592 -217560262 - AluSg SINE Alu -10 300 1 1610 121 125 8 chr2 33128170 33128418 -217559436 - AluSg1 SINE Alu -32 277 1 342 67 0 0 chr2 33129223 33129268 -217558586 + (T)n Simple_repeat Simple_repeat 1 45 0 2039 103 3 68 chr2 33129348 33129669 -217558185 - AluY SINE Alu -11 300 1 27 29 0 0 chr2 33129840 33129874 -217557980 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 33130027 33130048 -217557806 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 33130552 33130580 -217557274 + AT_rich Low_complexity Low_complexity 1 28 0 355 259 46 46 chr2 33130587 33130718 -217557136 + MER20B DNA MER1_type 52 182 -601 1462 148 53 42 chr2 33131537 33131668 -217556186 + AluJo SINE Alu 5 133 -179 2277 92 0 3 chr2 33131668 33131960 -217555894 + AluSg SINE Alu 1 291 -19 1462 148 53 42 chr2 33131960 33132111 -217555743 + AluJo SINE Alu 133 290 -22 1169 226 0 15 chr2 33132113 33132379 -217555475 + AluJo SINE Alu 36 297 -15 192 125 0 0 chr2 33132849 33132881 -217554973 + (TA)n Simple_repeat Simple_repeat 2 33 0 2271 109 0 7 chr2 33134271 33134573 -217553281 + AluSx SINE Alu 1 300 -12 414 75 0 0 chr2 33134593 33134646 -217553208 + Alu SINE Alu 241 293 -17 26 64 0 0 chr2 33134706 33134753 -217553101 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 33135025 33135057 -217552797 + AT_rich Low_complexity Low_complexity 1 32 0 1682 169 0 36 chr2 33135088 33135389 -217552465 + AluJb SINE Alu 1 290 -22 1133 165 55 77 chr2 33135631 33135904 -217551950 - AluJb SINE Alu -29 283 17 2100 118 0 16 chr2 33137544 33137857 -217549997 - AluSx SINE Alu -4 308 1 181 347 40 0 chr2 33137920 33137995 -217549859 - L2 LINE L2 -19 3253 3176 315 311 61 23 chr2 33138177 33138309 -217549545 - L2 LINE L2 -1004 2310 2174 26 0 0 0 chr2 33138417 33138443 -217549411 + AT_rich Low_complexity Low_complexity 1 26 0 1814 156 11 0 chr2 33138575 33138858 -217548996 + AluSx SINE Alu 1 286 -26 497 96 12 0 chr2 33139349 33139432 -217548422 + FLAM_A SINE Alu 59 142 0 2132 107 9 35 chr2 33139502 33139819 -217548035 - AluSx SINE Alu -3 309 1 246 326 61 11 chr2 33139863 33140044 -217547810 - L1MEc LINE L1 -4907 1477 1288 817 212 53 12 chr2 33140240 33140485 -217547369 - L1MEc LINE L1 -5511 1052 798 231 195 110 37 chr2 33140537 33140619 -217547235 + Charlie5 DNA MER1_type 35 122 -2490 685 286 125 21 chr2 33140762 33141185 -217546669 - L1MEc LINE L1 -5873 690 224 25 75 0 0 chr2 33141236 33141289 -217546565 + AT_rich Low_complexity Low_complexity 1 53 0 1623 199 34 0 chr2 33141811 33142102 -217545752 + AluJb SINE Alu 1 301 -11 207 328 216 29 chr2 33142462 33142633 -217545221 + MIR SINE MIR 41 243 -19 22 35 0 0 chr2 33143192 33143221 -217544633 + AT_rich Low_complexity Low_complexity 1 29 0 15494 129 48 17 chr2 33144109 33146260 -217541594 + Tigger4(Zombi) DNA MER2_type 1 2250 -481 2330 99 0 0 chr2 33146260 33146563 -217541291 - AluSq SINE Alu -10 303 1 15494 129 48 17 chr2 33146563 33147060 -217540794 + Tigger4(Zombi) DNA MER2_type 2250 2730 -1 301 157 0 71 chr2 33147195 33147265 -217540589 - BSR/Beta Satellite Satellite -33 109 45 * 692 253 60 0 chr2 33147249 33147415 -217540439 + MER58A DNA MER1_type 34 209 -15 326 231 147 45 chr2 33148236 33148260 -217539594 - L1ME4a LINE L1 -238 5883 5863 1960 138 3 0 chr2 33148260 33148549 -217539305 - AluSx SINE Alu -22 290 1 326 231 147 45 chr2 33148549 33148680 -217539174 - L1ME4a LINE L1 -258 5863 5712 291 283 0 12 chr2 33149065 33149186 -217538668 - MER5A DNA MER1_type 0 189 13 333 0 0 0 chr2 33150174 33150211 -217537643 + (TG)n Simple_repeat Simple_repeat 1 37 0 1757 216 47 20 chr2 33150244 33150694 -217537160 - MLT1C LTR MaLR -5 462 1 2173 214 25 101 chr2 33150914 33151624 -217536230 + MLT1-int LTR MaLR 5 660 -711 351 177 0 0 chr2 33151677 33151739 -217536115 + MLT1-int LTR MaLR 661 722 -649 1130 205 57 4 chr2 33151749 33151978 -217535876 + MLT1D LTR MaLR 265 505 0 284 216 135 0 chr2 33151982 33152056 -217535798 - L1M4 LINE L1 -2440 3706 3623 2144 113 0 0 chr2 33152147 33152431 -217535423 + AluSq SINE Alu 17 300 -13 380 282 84 93 chr2 33152454 33152488 -217535366 + L1M4c LINE L1 1136 1169 -5215 2462 90 0 0 chr2 33152488 33152799 -217535055 + AluSx SINE Alu 1 311 -1 380 282 84 93 chr2 33152799 33153065 -217534789 + L1M4c LINE L1 1169 1433 -4951 623 199 7 29 chr2 33153065 33153201 -217534653 + FLAM_A SINE Alu 1 133 0 380 282 84 93 chr2 33153201 33153328 -217534526 + L1M4c LINE L1 1433 1560 -4824 7392 31 2 0 chr2 33153349 33155231 -217532623 - L1PA4 LINE L1 0 6155 4221 2099 29 85 0 chr2 33155230 33155502 -217532352 + L1P LINE L1 2544 2838 -3308 * 2389 62 7 3 chr2 33155724 33156030 -217531824 + AluY SINE Alu 1 307 -4 244 313 148 68 chr2 33156030 33156429 -217531425 + L1ME LINE L1 229 659 -5546 1654 127 93 4 chr2 33156688 33156947 -217530907 + AluSx SINE Alu 1 282 -30 294 73 0 0 chr2 33156948 33156989 -217530865 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 323 267 0 11 chr2 33156996 33157086 -217530768 + L1ME LINE L1 2271 2359 -4037 1968 260 99 15 chr2 33157148 33158107 -217529747 + L1ME LINE L1 2449 3488 -2727 394 321 51 33 chr2 33158662 33158936 -217528918 - L1ME3 LINE L1 -203 5959 5681 779 211 126 82 chr2 33159804 33160146 -217527708 - L1MC4 LINE L1 -142 7900 7544 2069 248 86 8 chr2 33160151 33160800 -217527054 + L1MC4 LINE L1 6658 7357 -685 2050 128 24 0 chr2 33160841 33161139 -217526715 - AluSx SINE Alu -7 305 1 201 147 0 0 chr2 33162509 33162543 -217525311 + (T)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr2 33162557 33162594 -217525260 + AT_rich Low_complexity Low_complexity 1 37 0 333 192 0 0 chr2 33162817 33162869 -217524985 - Tigger2 DNA MER2_type -2666 52 1 413 172 21 0 chr2 33162947 33163040 -217524814 - L1MA4A LINE L1 -5 6298 6204 329 283 131 7 chr2 33164239 33164337 -217523517 + L1ME LINE L1 4200 4285 -1930 2241 117 0 0 chr2 33164337 33164637 -217523217 + AluSq SINE Alu 1 300 -13 329 283 131 7 chr2 33164637 33164821 -217523033 + L1ME LINE L1 4285 4517 -1698 1240 179 0 0 chr2 33164838 33165033 -217522821 + AluSx SINE Alu 3 197 -115 316 255 132 9 chr2 33165091 33165197 -217522657 + L1ME LINE L1 4630 4748 -1467 1904 195 99 2 chr2 33165386 33165822 -217522032 - L1MB5 LINE L1 -155 6019 5542 24 32 0 0 chr2 33166091 33166122 -217521732 + AT_rich Low_complexity Low_complexity 1 31 0 805 68 10 0 chr2 33166405 33166508 -217521346 - AluSg/x SINE Alu -8 301 198 2103 114 3 3 chr2 33166539 33166829 -217521025 + AluSq SINE Alu 1 290 -23 21 36 0 0 chr2 33167198 33167226 -217520628 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 33168556 33168577 -217519277 + AT_rich Low_complexity Low_complexity 1 21 0 253 222 0 0 chr2 33169219 33169282 -217518572 + (TAAA)n Simple_repeat Simple_repeat 4 66 0 1922 154 3 0 chr2 33169329 33169621 -217518233 - AluSx SINE Alu -19 293 1 575 226 39 0 chr2 33169782 33169937 -217517917 - L1MC4 LINE L1 -372 7670 7510 540 163 0 0 chr2 33170761 33170847 -217517007 + AluSg/x SINE Alu 206 291 -19 237 238 0 0 chr2 33170894 33170957 -217516897 + (TTTA)n Simple_repeat Simple_repeat 4 66 0 1452 87 0 0 chr2 33171083 33171267 -217516587 + AluSp SINE Alu 130 313 0 2020 108 3 24 chr2 33171427 33171722 -217516132 - AluSx SINE Alu -12 300 12 27 29 0 0 chr2 33173077 33173111 -217514743 + AT_rich Low_complexity Low_complexity 1 34 0 713 185 59 0 chr2 33173278 33173397 -217514457 + AluJo SINE Alu 9 134 -178 2025 98 41 3 chr2 33173398 33173693 -217514161 + AluSg SINE Alu 1 306 -4 1265 127 229 0 chr2 33173728 33173973 -217513881 + AluJb SINE Alu 1 301 -11 1946 127 38 3 chr2 33174706 33174998 -217512856 + AluSx SINE Alu 1 302 -10 351 191 0 0 chr2 33176341 33176404 -217511450 - L1MA10 LINE L1 -19 6315 6253 22 0 0 0 chr2 33177757 33177779 -217510075 + AT_rich Low_complexity Low_complexity 1 22 0 2047 102 28 7 chr2 33177779 33178062 -217509792 + AluSx SINE Alu 1 289 -23 1328 212 52 7 chr2 33178620 33178908 -217508946 - AluJo SINE Alu -11 301 1 2278 92 0 0 chr2 33178957 33179250 -217508604 + AluSg SINE Alu 1 293 -17 2055 141 7 0 chr2 33179270 33179576 -217508278 - AluSx SINE Alu -1 311 4 31 0 0 0 chr2 33179763 33179794 -217508060 + AT_rich Low_complexity Low_complexity 1 31 0 2259 92 3 0 chr2 33179803 33180095 -217507759 + AluSg SINE Alu 2 294 -16 21 0 0 0 chr2 33180276 33180297 -217507557 + AT_rich Low_complexity Low_complexity 1 21 0 2932 149 71 18 chr2 33180353 33180958 -217506896 - L1MC2 LINE L1 -31 6313 5677 641 289 48 4 chr2 33180950 33181178 -217506676 - L1M4 LINE L1 -1317 4829 4592 * 21 57 0 0 chr2 33181524 33181559 -217506295 + AT_rich Low_complexity Low_complexity 1 35 0 1681 244 22 34 chr2 33181674 33181836 -217506018 - L1MB8 LINE L1 -2 6176 6014 2351 96 3 0 chr2 33181836 33182139 -217505715 + AluSq SINE Alu 1 304 -9 1681 244 22 34 chr2 33182139 33182715 -217505139 - L1MB8 LINE L1 -164 6014 5324 1298 235 38 93 chr2 33182707 33183180 -217504674 - L1M4b LINE L1 -6392 467 21 * 2721 117 14 0 chr2 33183679 33184047 -217503807 - THE1C LTR MaLR -2 373 1 494 197 0 0 chr2 33184311 33184387 -217503467 - AluJ/FRAM SINE Alu -21 291 216 1518 179 33 7 chr2 33184418 33184692 -217503162 - AluJo SINE Alu -31 281 1 2123 120 17 0 chr2 33185009 33185309 -217502545 - AluSx SINE Alu -7 305 1 813 219 91 0 chr2 33185431 33185618 -217502236 + MER3 DNA MER1_type 6 209 0 2260 96 0 35 chr2 33185859 33186171 -217501683 + AluY SINE Alu 1 301 -10 1595 180 3 7 chr2 33186270 33186554 -217501300 + AluJb SINE Alu 23 305 -7 2015 142 3 0 chr2 33186602 33186897 -217500957 + AluSq SINE Alu 1 296 -17 458 161 25 0 chr2 33186914 33186995 -217500859 - L1PB3 LINE L1 -59 6095 6013 1893 148 3 20 chr2 33187024 33187328 -217500526 - AluSx SINE Alu -13 299 1 3113 186 43 36 chr2 33187328 33187396 -217500458 - L1M4 LINE L1 -1681 4465 4399 1601 194 7 16 chr2 33187396 33187705 -217500149 - AluJo SINE Alu 0 312 7 3113 186 43 36 chr2 33187705 33188333 -217499521 - L1M4 LINE L1 -1747 4399 3764 25 31 0 0 chr2 33188333 33188365 -217499489 + AT_rich Low_complexity Low_complexity 1 32 0 895 170 0 0 chr2 33188382 33188523 -217499331 - AluSq/x SINE Alu -172 141 1 2000 127 3 3 chr2 33188524 33188838 -217499016 - AluSx SINE Alu 0 314 1 1245 206 58 8 chr2 33188862 33189001 -217498853 - AluJo SINE Alu -37 275 144 243 0 0 0 chr2 33189001 33189028 -217498826 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1245 206 58 8 chr2 33189028 33189145 -217498709 - AluJo SINE Alu -168 144 6 963 220 24 4 chr2 33189145 33189395 -217498459 - L1M4 LINE L1 -2351 3795 3541 829 224 60 35 chr2 33189659 33189961 -217497893 + MLT2D LTR ERVL 1 511 -43 211 276 78 26 chr2 33190355 33190471 -217497383 - L2 LINE L2 -817 2497 2376 487 239 46 23 chr2 33192156 33192286 -217495568 - AluJb SINE Alu -37 275 143 1847 156 10 23 chr2 33192292 33192599 -217495255 - AluSx SINE Alu -9 303 1 2110 138 0 3 chr2 33192666 33192970 -217494884 + AluJb SINE Alu 1 303 -9 284 180 67 4 chr2 33193414 33193526 -217494328 + AluJo SINE Alu 1 136 -166 2517 37 3 13 chr2 33193526 33193824 -217494030 + AluY SINE Alu 1 295 -16 1865 87 0 12 chr2 33193831 33194072 -217493782 + AluY SINE Alu 54 291 -20 833 154 7 20 chr2 33194176 33194325 -217493529 + FRAM SINE Alu 1 40 0 2510 44 0 34 chr2 33194499 33194820 -217493034 + AluY SINE Alu 1 310 -1 2310 31 38 17 chr2 33194937 33195228 -217492626 + AluY SINE Alu 1 297 -14 260 320 0 31 chr2 33196611 33196708 -217491146 + MIR3 SINE MIR 70 163 -45 250 245 286 10 chr2 33196770 33196868 -217490986 - MIR SINE MIR -68 140 16 869 216 12 6 chr2 33197147 33197309 -217490545 - FRAM SINE Alu -16 160 1 225 0 0 0 chr2 33197309 33197334 -217490520 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2195 89 0 3 chr2 33197334 33197616 -217490238 - AluSc SINE Alu -28 281 1 7868 74 2 1 chr2 33197659 33198627 -217489227 + LTR5 LTR ERVK 1 969 0 1947 104 43 4 chr2 33198994 33199273 -217488581 - AluSg SINE Alu -14 296 7 851 308 184 13 chr2 33199302 33199953 -217487901 + L2 LINE L2 2397 3176 -137 2296 103 3 0 chr2 33199954 33200254 -217487600 - AluSg SINE Alu -9 301 1 3431 146 82 63 chr2 33200291 33200895 -217486959 + L1MB8 LINE L1 5417 6039 -139 1794 158 0 14 chr2 33200895 33201179 -217486675 - AluJb SINE Alu -20 292 13 3431 146 82 63 chr2 33201179 33201322 -217486532 + L1MB8 LINE L1 6039 6178 0 488 223 191 0 chr2 33201426 33201583 -217486271 + MIR SINE MIR 52 238 -24 228 182 91 0 chr2 33201591 33201646 -217486208 + L1 LINE L1 3944 4003 -2143 337 233 0 0 chr2 33201651 33201711 -217486143 + MLT1D LTR MaLR 1 60 -445 1224 137 64 5 chr2 33201711 33201915 -217485939 - MLT1A1 LTR MaLR 0 365 150 849 150 0 14 chr2 33201915 33202055 -217485799 - FRAM SINE Alu -6 170 33 345 78 0 0 chr2 33202059 33202110 -217485744 - L1MA3 LINE L1 0 6305 6255 860 161 40 7 chr2 33202112 33202261 -217485593 - MLT1A1 LTR MaLR -211 154 1 1645 101 22 9 chr2 33202388 33202616 -217485238 + AluSq SINE Alu 1 231 -82 363 23 0 0 chr2 33202633 33202677 -217485177 + (TC)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr2 33202676 33202699 -217485155 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 902 223 96 0 chr2 33202710 33203017 -217484837 + L1ME4a LINE L1 5136 5462 -700 281 209 105 9 chr2 33203015 33203120 -217484734 + L1ME4a LINE L1 6002 6116 -5 * 1725 181 0 17 chr2 33203128 33203426 -217484428 + AluJo SINE Alu 1 293 -19 1995 161 24 24 chr2 33203475 33203810 -217484044 - MER1B DNA MER1_type 0 337 3 1800 125 3 66 chr2 33203993 33204319 -217483535 - AluSx SINE Alu 0 307 1 2192 116 0 10 chr2 33204329 33204632 -217483222 - AluSx SINE Alu -12 300 1 278 233 78 22 chr2 33204959 33205049 -217482805 - LTR67 LTR ERVL -453 104 10 2075 139 0 3 chr2 33205049 33205343 -217482511 + AluSx SINE Alu 1 293 -19 292 313 47 16 chr2 33205431 33205559 -217482295 - L3 LINE CR1 -291 1286 1155 439 167 35 11 chr2 33205663 33205837 -217482017 + (TA)n Simple_repeat Simple_repeat 1 178 0 32 26 0 0 chr2 33205841 33205880 -217481974 + AT_rich Low_complexity Low_complexity 1 39 0 2136 110 10 0 chr2 33205954 33206253 -217481601 + AluSq SINE Alu 1 302 -11 1248 107 0 6 chr2 33206255 33206423 -217481431 + AluSg/x SINE Alu 136 302 -8 214 263 141 30 chr2 33206744 33206843 -217481011 - MIR SINE MIR -150 112 3 1530 221 131 13 chr2 33207067 33207519 -217480335 - MLT1D LTR MaLR 0 505 1 375 254 48 63 chr2 33207569 33207612 -217480242 - L1ME4a LINE L1 -13 6108 6066 1737 160 3 21 chr2 33207612 33207962 -217479892 + AluSx SINE Alu 1 345 0 375 254 48 63 chr2 33207962 33208106 -217479748 - L1ME4a LINE L1 -55 6066 5923 2317 109 3 3 chr2 33208727 33209039 -217478815 + AluSx SINE Alu 1 312 0 2411 74 3 3 chr2 33209754 33210053 -217477801 - AluSg SINE Alu -11 299 1 298 269 29 48 chr2 33210085 33210189 -217477665 - MIR3 SINE MIR -6 202 101 254 318 23 0 chr2 33210273 33210361 -217477493 - MIR SINE MIR -73 135 46 915 180 126 24 chr2 33210395 33210719 -217477135 - MLT1B LTR MaLR -2 503 1 341 301 116 14 chr2 33210845 33210991 -217476863 - MIR SINE MIR -74 188 28 493 136 0 0 chr2 33211191 33211257 -217476597 + AluS SINE Alu 1 66 -247 33 0 0 0 chr2 33211257 33211290 -217476564 + AT_rich Low_complexity Low_complexity 1 33 0 2068 142 0 3 chr2 33211412 33211714 -217476140 - AluSx SINE Alu -11 301 1 2480 72 0 0 chr2 33212098 33212405 -217475449 - AluSc SINE Alu -1 308 2 404 203 81 61 chr2 33212416 33212564 -217475290 + Charlie8 DNA MER1_type 61 211 -2206 239 266 109 120 chr2 33212760 33212944 -217474910 + MIR SINE MIR 3 184 -78 795 107 90 25 chr2 33212991 33213113 -217474741 + AluSq/x SINE Alu 2 131 -182 2335 105 0 0 chr2 33213115 33213419 -217474435 + AluSx SINE Alu 1 304 -8 2487 88 0 0 chr2 33213423 33213755 -217474099 + AluY SINE Alu 2 333 0 2103 138 0 3 chr2 33213758 33214069 -217473785 + AluSx SINE Alu 1 310 -2 566 236 0 0 chr2 33214076 33214186 -217473668 + MER96B DNA MER1_type? 307 416 -1 638 309 96 61 chr2 33214187 33214521 -217473333 + L2 LINE L2 2652 2973 -340 2134 120 17 3 chr2 33214521 33214821 -217473033 - AluSx SINE Alu -8 304 1 638 309 96 61 chr2 33214821 33215116 -217472738 + L2 LINE L2 2973 3295 -18 887 153 0 0 chr2 33215123 33215254 -217472600 + FLAM_C SINE Alu 1 131 -2 2037 137 0 13 chr2 33215597 33215896 -217471958 + AluSx SINE Alu 1 295 -17 299 222 22 44 chr2 33216139 33216229 -217471625 + MER5A DNA MER1_type 4 91 -98 272 344 8 33 chr2 33216326 33216448 -217471406 - MER5A DNA MER1_type 0 189 71 378 0 0 0 chr2 33216491 33216533 -217471321 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 33216545 33216571 -217471283 + AT_rich Low_complexity Low_complexity 1 26 0 2326 86 7 0 chr2 33216652 33216944 -217470910 + AluY SINE Alu 1 294 -17 193 333 124 0 chr2 33217071 33217176 -217470678 + L2 LINE L2 3153 3270 -2 * 364 244 178 0 chr2 33217175 33217310 -217470544 - MIR SINE MIR -1 261 103 515 116 53 53 chr2 33217323 33217418 -217470436 + LTR47A LTR ERVL 1 95 -357 310 205 86 43 chr2 33217586 33217703 -217470151 - L1MC4 LINE L1 -5 8037 7916 1498 56 0 0 chr2 33217785 33217963 -217469891 - AluY SINE Alu -7 304 127 234 347 129 27 chr2 33268018 33268271 -217419583 + L2 LINE L2 2778 3059 -254 201 189 0 38 chr2 33268310 33268363 -217419491 + (CA)n Simple_repeat Simple_repeat 1 51 0 2393 57 3 17 chr2 33268489 33268786 -217419068 + AluY SINE Alu 1 293 -18 293 130 0 0 chr2 33269810 33269856 -217417998 + Alu SINE Alu 254 299 -2 2170 111 7 0 chr2 33270858 33271155 -217416699 - AluYa5 SINE Alu -12 299 1 1062 195 180 45 chr2 33271266 33271533 -217416321 - AluSq SINE Alu 0 303 1 978 212 12 0 chr2 33271984 33272149 -217415705 + FAM SINE Alu 1 167 -8 1197 97 0 7 chr2 33272427 33272581 -217415273 - AluSp SINE Alu -20 293 141 1949 145 108 44 chr2 33273109 33273177 -217414677 - Tigger2a DNA MER2_type -2275 433 371 1348 148 183 15 chr2 33273177 33273440 -217414414 - AluJb SINE Alu -5 307 1 1949 145 108 44 chr2 33273440 33273778 -217414076 - Tigger2a DNA MER2_type -2337 371 1 2132 121 3 0 chr2 33273781 33274070 -217413784 - AluSp SINE Alu -23 290 1 2490 63 0 3 chr2 33274505 33274808 -217413046 + AluY SINE Alu 1 302 -9 349 283 72 20 chr2 33274988 33275140 -217412714 - L1ME4a LINE L1 -234 5887 5728 366 138 0 0 chr2 33275778 33275843 -217412011 - L1PB3 LINE L1 -4 6150 6086 1750 159 3 14 chr2 33277536 33277826 -217410028 + AluSx SINE Alu 1 287 -25 288 0 0 0 chr2 33277826 33277858 -217409996 + (CATA)n Simple_repeat Simple_repeat 2 33 0 358 131 50 0 chr2 33278002 33278101 -217409753 + (TA)n Simple_repeat Simple_repeat 2 105 0 1527 179 3 34 chr2 33278458 33278749 -217409105 + AluJo SINE Alu 31 312 0 2287 83 3 13 chr2 33278978 33279280 -217408574 - AluSx SINE Alu -13 299 1 282 335 64 65 chr2 33279358 33279640 -217408214 - L2 LINE L2 -256 3016 2730 23 0 0 0 chr2 33280345 33280368 -217407486 + AT_rich Low_complexity Low_complexity 1 23 0 283 172 57 98 chr2 33280517 33280639 -217407215 + MER113 DNA MER1_type? 80 196 -325 320 280 69 40 chr2 33280690 33280865 -217406989 + L1MC/D LINE L1 5641 5820 -1988 2139 115 13 0 chr2 33280877 33281181 -217406673 - AluSx SINE Alu -4 308 1 679 134 0 59 chr2 33281249 33281368 -217406486 + AluJb SINE Alu 1 112 -200 1857 127 36 7 chr2 33281504 33281808 -217406046 + AluSx SINE Alu 1 312 0 1953 138 3 7 chr2 33282757 33283054 -217404800 - AluSx SINE Alu -16 296 1 766 161 0 8 chr2 33283113 33283231 -217404623 + FLAM_C SINE Alu 1 117 -26 35 0 0 0 chr2 33283235 33283270 -217404584 + AT_rich Low_complexity Low_complexity 1 35 0 2002 143 0 10 chr2 33283270 33283577 -217404277 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 33283646 33283669 -217404185 + AT_rich Low_complexity Low_complexity 1 23 0 2292 112 0 0 chr2 33284399 33284702 -217403152 - AluSx SINE Alu -9 303 1 25 51 0 0 chr2 33285269 33285308 -217402546 + AT_rich Low_complexity Low_complexity 1 39 0 1703 166 48 0 chr2 33285446 33285741 -217402113 - AluJb SINE Alu -3 309 1 259 389 22 14 chr2 33285855 33285994 -217401860 - MIR3 SINE MIR -35 173 34 2164 124 0 0 chr2 33286129 33286419 -217401435 + AluSg SINE Alu 1 290 -20 1919 151 41 0 chr2 33286478 33286769 -217401085 + AluSg SINE Alu 1 303 -7 2125 99 24 7 chr2 33287100 33287392 -217400462 + AluSq SINE Alu 1 297 -16 2293 103 3 0 chr2 33291615 33291917 -217395937 - AluSp SINE Alu -10 303 1 1553 202 0 18 chr2 33293437 33293719 -217394135 + AluJb SINE Alu 6 282 -30 360 64 0 0 chr2 33293721 33293768 -217394086 + (TGGA)n Simple_repeat Simple_repeat 3 49 0 26 82 0 0 chr2 33293992 33294053 -217393801 + AT_rich Low_complexity Low_complexity 1 61 0 34 24 0 0 chr2 33295014 33295055 -217392799 + AT_rich Low_complexity Low_complexity 1 41 0 2154 90 45 0 chr2 33295224 33295512 -217392342 + AluSg SINE Alu 1 301 -9 341 171 341 0 chr2 33295556 33295644 -217392210 - MLT1F1 LTR MaLR -384 183 66 311 312 86 9 chr2 33296140 33296361 -217391493 - L1ME4a LINE L1 -255 5866 5629 482 165 25 0 chr2 33297161 33297240 -217390614 - AluJb SINE Alu -19 293 213 2145 119 3 0 chr2 33297776 33298069 -217389785 + AluSx SINE Alu 14 307 -5 2058 152 7 0 chr2 33298069 33298366 -217389488 + AluSx SINE Alu 1 299 -13 1926 140 7 0 chr2 33298380 33298666 -217389188 + AluSx SINE Alu 1 288 -24 1324 119 59 9 chr2 33299916 33300135 -217387719 + MER30 DNA MER1_type 1 230 0 2370 78 3 0 chr2 33300323 33300617 -217387237 + AluSp SINE Alu 2 296 -17 28 0 0 0 chr2 33300643 33300671 -217387183 + AT_rich Low_complexity Low_complexity 1 28 0 529 202 20 105 chr2 33300886 33301070 -217386784 + Charlie1 DNA MER1_type 2365 2524 -237 3647 137 45 9 chr2 33301070 33301743 -217386111 + L1MA5 LINE L1 5600 6296 -4 529 202 20 105 chr2 33301743 33301805 -217386049 + Charlie1 DNA MER1_type 2524 2590 -171 1752 126 3 35 chr2 33302486 33302771 -217385083 + AluSx SINE Alu 32 307 -5 24 0 0 0 chr2 33302860 33302884 -217384970 + AT_rich Low_complexity Low_complexity 1 24 0 185 62 0 31 chr2 33302889 33302921 -217384933 + (TA)n Simple_repeat Simple_repeat 1 31 0 209 293 37 0 chr2 33303132 33303214 -217384640 - MIR SINE MIR -54 208 124 781 142 4 147 chr2 33303745 33303902 -217383952 - L1PA15 LINE L1 0 6165 6048 1950 165 30 0 chr2 33303902 33304205 -217383649 - AluSx SINE Alu 0 312 1 781 142 4 147 chr2 33304205 33304272 -217383582 - L1PA15 LINE L1 -117 6048 5973 1989 132 20 7 chr2 33304604 33304908 -217382946 + AluSx SINE Alu 1 308 -4 2017 148 0 16 chr2 33305328 33305632 -217382222 + AluSx SINE Alu 1 299 -13 2244 106 0 10 chr2 33305746 33306049 -217381805 + AluSq SINE Alu 1 300 -13 1859 131 43 30 chr2 33306718 33307023 -217380831 + AluSq SINE Alu 1 309 -4 1110 173 71 5 chr2 33307122 33307319 -217380535 + AluJo SINE Alu 87 296 -16 262 94 0 38 chr2 33307396 33307449 -217380405 + (TTTCC)n Simple_repeat Simple_repeat 5 55 0 2139 87 4 7 chr2 33307462 33307738 -217380116 - AluSq SINE Alu -38 275 1 1872 154 0 13 chr2 33307900 33308206 -217379648 - AluSx SINE Alu -10 302 1 243 0 0 0 chr2 33308308 33308335 -217379519 + (TG)n Simple_repeat Simple_repeat 2 28 0 453 125 0 0 chr2 33308718 33308790 -217379064 + AluS SINE Alu 227 298 -12 1488 130 173 4 chr2 33309793 33310047 -217377807 - AluSg1 SINE Alu -12 297 1 993 79 0 0 chr2 33310131 33310257 -217377597 - AluY SINE Alu -15 296 171 50 65 0 0 chr2 33310292 33310384 -217377470 + AT_rich Low_complexity Low_complexity 1 92 0 1410 204 47 23 chr2 33310891 33311190 -217376664 - AluJo SINE Alu -6 306 1 785 213 91 15 chr2 33311564 33311827 -217376027 + L1MC5 LINE L1 7631 7913 -48 184 324 154 0 chr2 33312026 33312208 -217375646 + L2 LINE L2 2846 3055 -217 252 0 0 0 chr2 33312209 33312237 -217375617 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 703 165 0 0 chr2 33312265 33312374 -217375480 - AluSq SINE Alu -71 242 134 1521 128 0 77 chr2 33312375 33312675 -217375179 - AluSx SINE Alu 0 312 48 2077 135 0 13 chr2 33313568 33313871 -217373983 + AluSq SINE Alu 1 299 -14 1669 170 159 5 chr2 33313917 33314288 -217373566 - MSTA LTR MaLR 0 428 1 232 314 0 92 chr2 33314456 33314609 -217373245 + L2 LINE L2 3164 3302 -11 2108 96 0 7 chr2 33314645 33314955 -217372899 - AluSc SINE Alu 0 308 1 1922 150 0 10 chr2 33315314 33315608 -217372246 + AluSx SINE Alu 17 307 -5 1610 174 45 3 chr2 33315845 33316132 -217371722 + AluJb SINE Alu 1 299 -13 2203 90 7 3 chr2 33316144 33316433 -217371421 + AluSg SINE Alu 1 290 -20 344 245 29 20 chr2 33316554 33316656 -217371198 + L2 LINE L2 3208 3310 -3 25 0 0 0 chr2 33317237 33317262 -217370592 + AT_rich Low_complexity Low_complexity 1 25 0 1413 110 5 0 chr2 33318077 33318268 -217369586 + AluSq SINE Alu 1 192 -121 214 296 185 71 chr2 33319161 33319469 -217368385 - L2 LINE L2 -441 2873 2531 1902 155 7 0 chr2 33319761 33320051 -217367803 + AluJb SINE Alu 1 292 -20 329 199 171 55 chr2 33320063 33320209 -217367645 - L1ME LINE L1 -350 5771 5609 2401 76 0 0 chr2 33320561 33320852 -217367002 + AluSc SINE Alu 1 291 -18 250 346 65 19 chr2 33322255 33322362 -217365492 - L2 LINE L2 -24 3248 3137 2282 101 13 0 chr2 33322799 33323106 -217364748 - AluY SINE Alu 0 311 1 1101 110 0 30 chr2 33323180 33323344 -217364510 - AluSg/x SINE Alu -18 292 134 1936 118 22 0 chr2 33323344 33323614 -217364240 - AluSx SINE Alu -36 276 1 1580 211 73 45 chr2 33323783 33324248 -217363606 + L1ME1 LINE L1 5683 6160 -6 700 227 57 31 chr2 33324883 33325077 -217362777 + HAL1 LINE L1 574 772 -1735 2338 74 0 19 chr2 33325443 33325754 -217362100 - AluY SINE Alu -6 305 1 396 103 0 0 chr2 33326095 33326153 -217361701 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1981 98 4 0 chr2 33326157 33326422 -217361432 - AluSx SINE Alu -46 266 1 395 245 16 125 chr2 33327622 33327756 -217360098 - MIR SINE MIR -34 228 119 2193 75 7 0 chr2 33327756 33328080 -217359774 - AluSx SINE Alu 0 328 3 395 245 16 125 chr2 33328080 33328136 -217359718 - MIR SINE MIR -143 119 58 2008 107 7 10 chr2 33328151 33328442 -217359412 - AluSq SINE Alu -23 290 1 2564 46 0 16 chr2 33328455 33328761 -217359093 - AluY SINE Alu -10 301 1 201 189 0 38 chr2 33328887 33328940 -217358914 + (TG)n Simple_repeat Simple_repeat 1 51 0 234 347 129 27 chr2 33328979 33329232 -217358622 - L2 LINE L2 -254 3059 2778 2227 112 3 0 chr2 33330044 33330349 -217357505 + AluSx SINE Alu 1 306 -6 24 32 0 0 chr2 33330796 33330827 -217357027 + AT_rich Low_complexity Low_complexity 1 31 0 2109 109 16 10 chr2 33330829 33331133 -217356721 - AluSx SINE Alu -6 306 1 829 123 14 41 chr2 33331185 33331331 -217356523 - FLAM_C SINE Alu -1 142 1 235 61 41 82 chr2 33331893 33331942 -217355912 + MER58 DNA MER1_type 68 114 -2306 255 114 209 0 chr2 33331943 33331997 -217355857 + MER58 DNA MER1_type 2357 2420 0 976 230 25 0 chr2 33332225 33332429 -217355425 + MER3 DNA MER1_type 1 209 0 1701 168 34 17 chr2 33332435 33332726 -217355128 - AluJo SINE Alu -16 296 1 24 32 0 0 chr2 33333053 33333084 -217354770 + AT_rich Low_complexity Low_complexity 1 31 0 1655 171 25 4 chr2 33333323 33333597 -217354257 - AluJb SINE Alu -18 294 15 2123 124 0 0 chr2 33333689 33333979 -217353875 - AluSx SINE Alu -22 290 1 2434 86 3 0 chr2 33334427 33334729 -217353125 + AluSg SINE Alu 1 303 -7 2368 87 3 0 chr2 33335236 33335535 -217352319 - AluSx SINE Alu -12 300 1 272 310 133 26 chr2 33335583 33335696 -217352158 - MIR SINE MIR -68 140 16 191 376 96 13 chr2 33335817 33335974 -217351880 - L2 LINE L2 -218 3054 2885 2261 109 0 3 chr2 33336342 33336653 -217351201 - AluSg SINE Alu 0 310 1 271 271 37 65 chr2 33336802 33336909 -217350945 + L2 LINE L2 2262 2365 -949 205 224 53 66 chr2 33337144 33337220 -217350634 + MIR3 SINE MIR 93 167 -41 2292 98 10 0 chr2 33337393 33337700 -217350154 - AluSx SINE Alu -2 310 1 279 306 52 91 chr2 33337755 33337863 -217349991 - MIR SINE MIR -3 259 148 2438 72 0 0 chr2 33337863 33338154 -217349700 - AluY SINE Alu -20 291 1 279 306 52 91 chr2 33338154 33338297 -217349557 - MIR SINE MIR -114 148 18 1964 135 20 7 chr2 33338745 33339049 -217348805 + AluSx SINE Alu 2 309 -3 2192 103 3 0 chr2 33339723 33340050 -217347804 + AluSx SINE Alu 1 328 0 1125 252 37 7 chr2 33340313 33340583 -217347271 - MER58 DNA MER1_type -63 278 1 1336 101 0 0 chr2 33340700 33340868 -217346986 - AluSp SINE Alu -12 301 134 2134 129 0 3 chr2 33340868 33341179 -217346675 - AluSx SINE Alu -2 310 1 2170 134 0 3 chr2 33341270 33341575 -217346279 - AluSx SINE Alu -8 304 1 185 0 40 0 chr2 33341671 33341696 -217346158 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1843 160 0 3 chr2 33341698 33341991 -217345863 - AluJb SINE Alu -20 292 1 1172 136 0 0 chr2 33341999 33342161 -217345693 - AluSg/x SINE Alu -19 293 132 2113 119 3 7 chr2 33342320 33342629 -217345225 - AluSx SINE Alu 0 308 1 2018 110 3 49 chr2 33342777 33342922 -217344932 + AluSx SINE Alu 3 128 -184 2222 125 0 3 chr2 33342922 33343225 -217344629 + AluSx SINE Alu 3 304 -8 2018 110 3 49 chr2 33343225 33343387 -217344467 + AluSx SINE Alu 128 296 -16 849 151 0 43 chr2 33343611 33343750 -217344104 - FLAM_A SINE Alu 0 133 1 306 206 0 0 chr2 33343820 33343888 -217343966 + CT-rich Low_complexity Low_complexity 1 68 0 695 202 0 0 chr2 33343888 33344012 -217343842 - FLAM_A SINE Alu -1 141 18 281 256 93 0 chr2 33344279 33344365 -217343489 + MIR SINE MIR 56 149 -113 1328 46 0 0 chr2 33344579 33344730 -217343124 - L1PA4 LINE L1 -8 6147 5997 2279 103 3 10 chr2 33344731 33345041 -217342813 - AluSx SINE Alu -4 308 1 2272 92 0 0 chr2 33345058 33345350 -217342504 - AluY SINE Alu -19 292 1 760 194 23 8 chr2 33345358 33345487 -217342367 - AluJo SINE Alu -176 136 6 2267 95 0 13 chr2 33345580 33345885 -217341969 - AluY SINE Alu -10 301 1 1062 195 180 45 chr2 33345996 33346263 -217341591 - AluSq SINE Alu 0 303 1 978 212 12 0 chr2 33346714 33346879 -217340975 + FAM SINE Alu 1 167 -8 2222 102 0 7 chr2 33347157 33347451 -217340403 - AluSq SINE Alu -20 293 2 664 230 7 22 chr2 33347463 33347598 -217340256 - FLAM_A SINE Alu 0 133 1 2059 133 3 7 chr2 33347753 33348062 -217339792 + AluJb SINE Alu 3 310 -2 2296 101 0 3 chr2 33348568 33348866 -217338988 - AluSg SINE Alu -13 297 1 204 40 0 0 chr2 33349372 33349397 -217338457 + (T)n Simple_repeat Simple_repeat 1 25 0 201 328 0 17 chr2 33350117 33350175 -217337679 - MIR SINE MIR -186 76 20 2185 88 11 0 chr2 33350382 33350666 -217337188 - AluSp SINE Alu -25 288 2 334 239 11 23 chr2 33351015 33351103 -217336751 + MER2 DNA MER2_type 2 88 -257 2201 101 3 0 chr2 33351114 33351400 -217336454 + AluSg SINE Alu 1 287 -23 186 71 0 0 chr2 33351409 33351437 -217336417 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2266 114 3 0 chr2 33352342 33352640 -217335214 + AluSx SINE Alu 8 306 -6 22 0 0 0 chr2 33352891 33352913 -217334941 + AT_rich Low_complexity Low_complexity 1 22 0 227 234 182 13 chr2 33353100 33353177 -217334677 - MIR3 SINE MIR -28 180 91 209 293 61 20 chr2 33353277 33353376 -217334478 - MIR SINE MIR -1 261 159 383 200 50 32 chr2 33353418 33353564 -217334290 - L1MA10 LINE L1 -6 6306 6166 1506 156 6 86 chr2 33353564 33353720 -217334134 - AluJo SINE Alu -23 289 122 2209 121 0 0 chr2 33353720 33354018 -217333836 - AluSx SINE Alu -14 298 1 1907 150 3 14 chr2 33354018 33354312 -217333542 - AluSg SINE Alu -19 291 1 1506 156 6 86 chr2 33354312 33354468 -217333386 - AluJo SINE Alu -188 124 1 282 116 0 0 chr2 33354755 33354798 -217333056 - Alu SINE Alu -4 304 262 1047 198 19 10 chr2 33354865 33355072 -217332782 - MER3 DNA MER1_type 0 209 1 448 340 180 10 chr2 33355195 33355589 -217332265 - L2 LINE L2 -5 3267 2807 219 353 0 0 chr2 33355671 33355739 -217332115 - L2 LINE L2 -49 3223 3156 1981 102 0 0 chr2 33356005 33356261 -217331593 - AluY SINE Alu -9 302 47 1697 63 5 0 chr2 33356372 33356577 -217331277 - AluY SINE Alu -8 303 98 2067 113 7 7 chr2 33356858 33357150 -217330704 - AluSq SINE Alu -21 292 1 1452 202 54 0 chr2 33357160 33357437 -217330417 - AluJo SINE Alu -20 292 1 1634 201 3 3 chr2 33357989 33358287 -217329567 - AluJo SINE Alu -14 298 1 21 0 0 0 chr2 33358378 33358399 -217329455 + AT_rich Low_complexity Low_complexity 1 21 0 6412 58 26 6 chr2 33358555 33359371 -217328483 - L1PA7 LINE L1 0 6469 5638 2168 27 58 0 chr2 33359364 33359624 -217328230 + L1PA7 LINE L1 5737 6011 -143 * 17569 78 4 4 chr2 33359624 33361987 -217325867 - L1PA7 LINE L1 -822 5639 3278 4780 98 22 0 chr2 33361985 33362652 -217325202 - L1PA7 LINE L1 -5779 682 1 * 438 75 0 0 chr2 33362655 33362722 -217325132 + (TATG)n Simple_repeat Simple_repeat 2 68 0 2153 104 0 0 chr2 33362725 33363005 -217324849 - AluSg SINE Alu -30 280 1 2202 90 0 45 chr2 33363858 33364169 -217323685 - AluSx SINE Alu -15 297 1 2025 113 7 0 chr2 33364638 33364913 -217322941 + AluSc SINE Alu 4 280 -29 216 0 0 0 chr2 33364916 33364940 -217322914 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 330 304 15 44 chr2 33365228 33365363 -217322491 + MIR SINE MIR 34 164 -98 284 262 56 71 chr2 33365433 33365559 -217322295 + MIR SINE MIR 28 151 -111 2396 86 3 0 chr2 33366437 33366738 -217321116 - AluSx SINE Alu -10 302 1 2045 133 0 29 chr2 33366794 33366929 -217320925 + AluSq SINE Alu 1 138 -175 2452 73 10 19 chr2 33366929 33367243 -217320611 + AluY SINE Alu 1 311 0 2045 133 0 29 chr2 33367243 33367423 -217320431 + AluSq SINE Alu 138 307 -6 498 159 0 0 chr2 33367529 33367617 -217320237 + CT-rich Low_complexity Low_complexity 1 88 0 654 150 0 40 chr2 33367618 33367718 -217320136 - FLAM_C SINE Alu -21 122 27 23 0 0 0 chr2 33367797 33367820 -217320034 + AT_rich Low_complexity Low_complexity 1 23 0 2479 77 0 0 chr2 33367820 33368131 -217319723 + AluY SINE Alu 1 311 0 944 128 7 7 chr2 33368173 33368314 -217319540 - AluJb SINE Alu -171 141 1 2279 109 6 3 chr2 33368625 33368936 -217318918 + AluSx SINE Alu 1 312 0 32 26 0 0 chr2 33368949 33368988 -217318866 + AT_rich Low_complexity Low_complexity 1 39 0 1383 111 5 0 chr2 33369010 33369200 -217318654 - AluSx SINE Alu -121 191 1 419 229 150 0 chr2 33369275 33369415 -217318439 - L1ME1 LINE L1 -6 6160 6000 528 130 150 0 chr2 33369424 33369524 -217318330 - L1ME1 LINE L1 -207 5957 5843 312 247 56 11 chr2 33369539 33369628 -217318226 - L1ME1 LINE L1 -601 5758 5666 2346 112 0 3 chr2 33369628 33369941 -217317913 - AluSx SINE Alu 0 312 1 1518 224 36 17 chr2 33369941 33370361 -217317493 - L1ME1 LINE L1 -813 5333 4906 642 138 11 0 chr2 33370369 33370463 -217317391 - FLAM_C SINE Alu -16 127 33 1021 202 99 11 chr2 33370470 33370732 -217317122 - L1ME1 LINE L1 -1233 4913 4629 294 364 39 26 chr2 33370838 33371069 -217316785 + MIR SINE MIR 29 262 0 2118 237 50 42 chr2 33371855 33372248 -217315606 - L1MC4 LINE L1 -157 7885 7497 2241 103 0 7 chr2 33372248 33372549 -217315305 - AluSq SINE Alu -14 299 1 2118 237 50 42 chr2 33372549 33372735 -217315119 - L1MC4 LINE L1 -545 7497 7298 1973 115 40 0 chr2 33372735 33373013 -217314841 + AluSx SINE Alu 1 289 -23 2118 237 50 42 chr2 33373013 33373068 -217314786 - L1MC4 LINE L1 -744 7298 7245 2444 87 0 0 chr2 33373174 33373473 -217314381 - AluSx SINE Alu -13 299 1 2276 90 0 13 chr2 33373684 33373984 -217313870 - AluY SINE Alu -15 296 1 342 320 127 18 chr2 33374063 33374291 -217313563 - MIR SINE MIR -3 259 7 2394 110 0 0 chr2 33374805 33375114 -217312740 - AluSq SINE Alu -4 309 1 22 35 0 0 chr2 33375405 33375434 -217312420 + AT_rich Low_complexity Low_complexity 1 29 0 2123 129 0 6 chr2 33375500 33375811 -217312043 - AluSg1 SINE Alu 0 309 1 21 0 0 0 chr2 33376070 33376091 -217311763 + AT_rich Low_complexity Low_complexity 1 21 0 712 260 82 46 chr2 33376120 33376473 -217311381 - L1ME3A LINE L1 -211 5951 5585 2268 89 0 20 chr2 33376473 33376775 -217311079 - AluSc SINE Alu -13 296 1 712 260 82 46 chr2 33376775 33376867 -217310987 - L1ME3A LINE L1 -577 5585 5498 1790 157 17 7 chr2 33377003 33377302 -217310552 + AluJb SINE Alu 7 308 -4 197 83 28 0 chr2 33377418 33377454 -217310400 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 2406 72 0 0 chr2 33377456 33377749 -217310105 - AluY SINE Alu -18 293 1 290 346 90 25 chr2 33378160 33378515 -217309339 - L2 LINE L2 -1259 2055 1678 1799 134 40 7 chr2 33378733 33379041 -217308813 + AluSx SINE Alu 1 317 0 578 295 142 11 chr2 33379322 33379603 -217308251 - L2 LINE L2 0 3313 2996 181 315 79 11 chr2 33380261 33380350 -217307504 + L3 LINE CR1 587 681 -896 1783 156 65 26 chr2 33380517 33380869 -217306985 + MER47A DNA MER2_type 1 366 0 24 0 0 0 chr2 33380969 33380993 -217306861 + AT_rich Low_complexity Low_complexity 1 24 0 444 82 0 0 chr2 33380993 33381054 -217306800 + (TG)n Simple_repeat Simple_repeat 2 62 0 2186 96 3 48 chr2 33381691 33381870 -217305984 - AluSq SINE Alu -13 300 139 2418 78 0 10 chr2 33381870 33382177 -217305677 - AluY SINE Alu -7 304 1 2186 96 3 48 chr2 33382177 33382311 -217305543 - AluSq SINE Alu -174 139 1 1974 123 0 14 chr2 33382896 33383180 -217304674 + AluSg SINE Alu 1 280 -30 1931 4 0 0 chr2 33383195 33383423 -217304431 - L1PA2 LINE L1 -249 5906 5679 230 51 77 0 chr2 33383410 33383449 -217304405 + L1PA3 LINE L1 6110 6151 -4 * 350 299 56 30 chr2 33383819 33384016 -217303838 + L1MDa LINE L1 1401 1702 -4724 2236 109 3 6 chr2 33384039 33384352 -217303502 - AluSx SINE Alu 0 312 1 2297 206 94 26 chr2 33384534 33385364 -217302490 + L1M4 LINE L1 3763 4648 -1498 429 245 16 78 chr2 33385373 33385393 -217302461 + L1ME1 LINE L1 138 158 -6047 1702 179 21 3 chr2 33385393 33385683 -217302171 - AluSx SINE Alu -17 295 1 429 245 16 78 chr2 33385683 33385854 -217302000 + L1ME1 LINE L1 158 317 -5888 2122 138 3 10 chr2 33385854 33386166 -217301688 - AluSx SINE Alu -2 310 1 1715 267 50 9 chr2 33386222 33387079 -217300775 + L1ME1 LINE L1 1967 2827 -3388 334 266 47 16 chr2 33387158 33387286 -217300568 + L1ME1 LINE L1 2857 2988 -3227 2458 202 132 11 chr2 33387363 33388299 -217299555 + L1ME1 LINE L1 5126 6169 -66 302 45 23 0 chr2 33389004 33389048 -217298806 + L1MC4 LINE L1 7935 7979 -63 529 191 118 33 chr2 33389048 33389200 -217298654 + MER6B DNA MER2_type 1 165 -45 207 340 48 48 chr2 33389520 33389623 -217298231 - L2 LINE L2 -189 3083 2981 2270 92 17 0 chr2 33390328 33390621 -217297233 - AluSx SINE Alu -14 298 1 31 26 0 0 chr2 33390712 33390750 -217297104 + AT_rich Low_complexity Low_complexity 1 38 0 892 129 8 0 chr2 33391071 33391203 -217296651 - FLAM_C SINE Alu 0 133 1 1392 129 52 8 chr2 33391359 33391607 -217296247 + L1MB2 LINE L1 5906 6164 -7 567 241 51 110 chr2 33391612 33391716 -217296138 + L1M4 LINE L1 4364 4473 -1673 2164 125 0 14 chr2 33391716 33392013 -217295841 + AluSx SINE Alu 5 297 -15 567 241 51 110 chr2 33392013 33392282 -217295572 + L1M4 LINE L1 4473 4715 -1431 893 217 0 6 chr2 33392322 33392497 -217295357 + MER5A DNA MER1_type 1 174 -15 575 248 96 23 chr2 33392500 33392802 -217295052 + L1M4 LINE L1 4753 5076 -1070 256 180 0 66 chr2 33392896 33392957 -217294897 + MIR SINE MIR 201 257 -5 802 153 15 22 chr2 33393445 33393582 -217294272 + AluJb SINE Alu 1 136 -176 1740 182 0 19 chr2 33393693 33394001 -217293853 - AluJo SINE Alu -10 302 1 1585 132 30 0 chr2 33394058 33394323 -217293531 - L1MB3 LINE L1 -19 6164 5892 2110 122 0 34 chr2 33394324 33394461 -217293393 + AluSq SINE Alu 1 141 -172 2441 97 0 0 chr2 33394461 33394771 -217293083 + AluSg SINE Alu 1 310 0 2110 122 0 34 chr2 33394771 33394953 -217292901 + AluSq SINE Alu 141 309 -4 1370 106 0 6 chr2 33394982 33395162 -217292692 + AluSg/x SINE Alu 120 298 -14 1049 190 93 28 chr2 33395165 33395283 -217292571 - L1MB3 LINE L1 -280 5903 5794 2046 119 0 20 chr2 33395283 33395616 -217292238 - AluSx SINE Alu 0 312 1 1049 190 93 28 chr2 33395616 33395786 -217292068 - L1MB3 LINE L1 -389 5794 5596 1902 148 27 3 chr2 33395943 33396240 -217291614 + AluJb SINE Alu 5 308 -4 199 343 56 19 chr2 33396661 33396769 -217291085 - MIR SINE MIR -112 150 39 1682 154 11 4 chr2 33396780 33397040 -217290814 - AluSx SINE Alu -16 296 35 1604 179 25 18 chr2 33397167 33397452 -217290402 - AluJo SINE Alu -25 287 1 207 0 0 0 chr2 33397458 33397481 -217290373 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2540 40 0 3 chr2 33397505 33397802 -217290052 - AluY SINE Alu -15 296 1 288 304 54 0 chr2 33398261 33398353 -217289501 - L2 LINE L2 -246 3067 2971 397 175 109 36 chr2 33399222 33399357 -217288497 - MIR SINE MIR -54 208 60 2112 116 7 7 chr2 33399569 33399862 -217287992 - AluSq SINE Alu -20 293 1 381 294 0 20 chr2 33400116 33400218 -217287636 + L2 LINE L2 3190 3289 -24 361 252 57 16 chr2 33400458 33400581 -217287273 + MIR3 SINE MIR 33 160 -48 297 242 0 0 chr2 33400602 33400664 -217287190 - Charlie8 DNA MER1_type -990 1427 1366 286 222 0 32 chr2 33400766 33400829 -217287025 - MER5B DNA MER1_type -1 177 117 1391 154 0 26 chr2 33400829 33401063 -217286791 + AluJo SINE Alu 85 312 0 188 194 0 0 chr2 33401125 33401156 -217286698 - MER5B DNA MER1_type -131 47 17 497 284 52 0 chr2 33402065 33402199 -217285655 + MIR SINE MIR 17 157 -105 2227 84 7 0 chr2 33402209 33402493 -217285361 + AluSq SINE Alu 1 286 -27 1426 232 33 25 chr2 33402830 33403192 -217284662 - MLT1A1 LTR MaLR 0 365 1 2099 141 0 3 chr2 33403206 33403510 -217284344 - AluSx SINE Alu -9 303 1 365 197 0 0 chr2 33403519 33403595 -217284259 - L1MC4 LINE L1 0 8042 7967 1453 223 49 25 chr2 33403598 33404019 -217283835 - L1MC4 LINE L1 -166 7657 7198 2030 175 75 10 chr2 33404019 33404419 -217283435 + MSTB LTR MaLR 1 426 0 1453 223 49 25 chr2 33404419 33404483 -217283371 - L1MC4 LINE L1 -625 7198 7137 22 0 0 0 chr2 33404496 33404518 -217283336 + AT_rich Low_complexity Low_complexity 1 22 0 1378 197 14 24 chr2 33404577 33404866 -217282988 - AluJo SINE Alu -16 296 11 656 204 27 18 chr2 33404870 33405091 -217282763 - L1MC4 LINE L1 -820 7222 7000 2331 112 7 0 chr2 33405100 33405405 -217282449 - AluSx SINE Alu -5 307 1 547 239 128 83 chr2 33405538 33405593 -217282261 + MLT1J LTR MaLR 3 54 -457 2280 89 7 3 chr2 33405593 33405885 -217281969 - AluSx SINE Alu -19 293 1 547 239 128 83 chr2 33405885 33406118 -217281736 + MLT1J LTR MaLR 54 304 -207 1570 182 156 12 chr2 33406168 33406514 -217281340 - MSTD LTR MaLR 0 396 1 1558 163 19 49 chr2 33406760 33407085 -217280769 + L1MD3 LINE L1 6663 6977 -1018 2184 134 21 100 chr2 33407088 33407327 -217280527 + Tigger2a DNA MER2_type 1 257 -2451 2253 116 7 7 chr2 33407327 33407630 -217280224 - AluSg SINE Alu -7 303 1 2184 134 21 100 chr2 33407630 33407678 -217280176 + Tigger2a DNA MER2_type 257 307 -2401 1052 98 144 17 chr2 33407678 33407701 -217280153 - MER107 DNA MER1_type -1 196 177 217 0 61 0 chr2 33407701 33407734 -217280120 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1052 98 144 17 chr2 33407734 33407884 -217279970 - MER107 DNA MER1_type -20 177 1 2184 134 21 100 chr2 33407884 33408066 -217279788 + Tigger2a DNA MER2_type 307 434 0 582 137 0 98 chr2 33408066 33408219 -217279635 + L1MC3 LINE L1 6964 7101 -684 341 211 66 0 chr2 33408225 33408301 -217279553 + MLT1F1 LTR MaLR 45 125 -442 426 216 10 0 chr2 33408301 33408398 -217279456 + L1MD3 LINE L1 7404 7501 -494 961 94 0 7 chr2 33408398 33408536 -217279318 - Tigger4(Zombi) DNA MER2_type 0 2731 2595 1157 177 26 17 chr2 33409030 33409262 -217278592 - AluSg/x SINE Alu -6 306 73 2241 113 3 3 chr2 33409450 33409751 -217278103 - AluSx SINE Alu -11 301 1 2215 127 0 10 chr2 33409854 33410168 -217277686 + AluSx SINE Alu 1 311 -1 2295 104 3 0 chr2 33410680 33410977 -217276877 + AluSx SINE Alu 1 298 -14 223 318 48 40 chr2 33410992 33411118 -217276736 - MIR3 SINE MIR -25 183 57 1608 182 43 10 chr2 33411567 33411869 -217275985 - AluJb SINE Alu 0 312 1 1397 184 131 28 chr2 33411922 33412281 -217275573 + MSTD LTR MaLR 1 396 0 5607 115 25 3 chr2 33412785 33413186 -217274668 - L1PA15 LINE L1 -2 6163 5772 2372 85 0 0 chr2 33413186 33413480 -217274374 - AluY SINE Alu -17 294 1 5607 115 25 3 chr2 33413480 33414541 -217273313 - L1PA15 LINE L1 -393 5772 4708 305 338 58 47 chr2 33415111 33415389 -217272465 - L1ME4a LINE L1 -137 5984 5704 228 258 26 58 chr2 33415476 33415631 -217272223 - HAL1 LINE L1 -133 2374 2225 1756 200 0 7 chr2 33415716 33416016 -217271838 - AluJo SINE Alu -14 298 1 1403 178 120 11 chr2 33416020 33416296 -217271558 - AluSx SINE Alu -6 306 1 322 251 60 42 chr2 33416650 33416865 -217270989 - HAL1 LINE L1 -877 1630 1412 669 226 154 24 chr2 33416880 33417088 -217270766 + MIR SINE MIR 22 256 -6 492 299 56 34 chr2 33417413 33417681 -217270173 - HAL1 LINE L1 -1409 1098 825 284 212 59 12 chr2 33419122 33419207 -217268647 - L1 LINE L1 -1246 4900 4812 183 261 261 72 chr2 33419260 33419371 -217268483 + L2 LINE L2 3182 3313 0 509 271 43 7 chr2 33420283 33420461 -217267393 - MLT1K LTR MaLR -5 610 419 1412 203 64 37 chr2 33420643 33420939 -217266915 - AluJo SINE Alu -7 305 2 401 281 129 22 chr2 33420939 33421070 -217266784 + MIR SINE MIR 114 262 0 196 276 52 0 chr2 33421066 33421124 -217266730 - MIR SINE MIR -108 154 94 * 544 252 116 13 chr2 33421496 33421651 -217266203 - MIR SINE MIR -89 173 3 649 163 15 0 chr2 33422712 33422847 -217265007 + CT-rich Low_complexity Low_complexity 3 139 0 761 188 12 59 chr2 33422848 33423018 -217264836 - AluJo SINE Alu -38 274 113 3585 170 79 76 chr2 33423250 33423832 -217264022 + Charlie1a DNA MER1_type 1 579 -2182 2190 121 48 25 chr2 33423832 33424188 -217263666 - THE1B LTR MaLR 0 364 1 12041 83 3 4 chr2 33424188 33425770 -217262084 - THE1B-int LTR MaLR 0 1580 1 2274 106 48 31 chr2 33425770 33426128 -217261726 - THE1B LTR MaLR 0 364 1 3585 170 79 76 chr2 33426128 33426759 -217261095 + Charlie1a DNA MER1_type 579 1245 -1516 180 0 0 0 chr2 33426759 33426779 -217261075 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 3585 170 79 76 chr2 33426779 33426990 -217260864 + Charlie1a DNA MER1_type 1245 1454 -1 2449 56 7 3 chr2 33427060 33427363 -217260491 - AluY SINE Alu -7 304 1 201 280 13 40 chr2 33427709 33427784 -217260070 + MIR SINE MIR 79 151 -57 219 69 0 0 chr2 33428019 33428048 -217259806 + (CA)n Simple_repeat Simple_repeat 2 30 0 2348 98 7 0 chr2 33429637 33429944 -217257910 - AluSx SINE Alu -3 309 1 2048 116 48 0 chr2 33430107 33430401 -217257453 - AluSg SINE Alu -2 308 1 1532 167 4 15 chr2 33430403 33430672 -217257182 - AluJb SINE Alu -17 295 30 25 31 0 0 chr2 33431634 33431666 -217256188 + AT_rich Low_complexity Low_complexity 1 32 0 358 200 200 0 chr2 33431727 33431832 -217256022 - L1MC4 LINE L1 -157 7885 7760 21 0 0 0 chr2 33433137 33433158 -217254696 + AT_rich Low_complexity Low_complexity 1 21 0 904 214 0 12 chr2 33433222 33433395 -217254459 - FAM SINE Alu -4 171 1 23 33 0 0 chr2 33433399 33433429 -217254425 + AT_rich Low_complexity Low_complexity 1 30 0 228 372 122 6 chr2 33433652 33433816 -217254038 - MIR3 SINE MIR -14 194 12 333 294 140 14 chr2 33433844 33433987 -217253867 - MIR SINE MIR 0 262 102 328 256 139 54 chr2 33434671 33434800 -217253054 + MIR3 SINE MIR 57 196 -12 21 0 0 0 chr2 33435131 33435152 -217252702 + AT_rich Low_complexity Low_complexity 1 21 0 1715 182 3 46 chr2 33436743 33437045 -217250809 + AluJb SINE Alu 1 289 -23 267 285 122 32 chr2 33437050 33437173 -217250681 - MIR3 SINE MIR -5 203 70 592 280 98 14 chr2 33437189 33437403 -217250451 + MIR SINE MIR 3 234 -28 2010 236 26 21 chr2 33437436 33438005 -217249849 + HsTC2 DNA Tc2 13 584 -1314 266 197 158 0 chr2 33438014 33438090 -217249764 + HsTC2 DNA Tc2 1811 1898 0 24 32 0 0 chr2 33438359 33438390 -217249464 + AT_rich Low_complexity Low_complexity 1 31 0 2243 95 0 0 chr2 33439658 33439977 -217247877 - AluSq SINE Alu 0 319 1 394 306 118 85 chr2 33440137 33440384 -217247470 + L2 LINE L2 2920 3182 -90 2090 101 16 36 chr2 33440384 33440692 -217247162 + AluSc SINE Alu 1 302 -7 394 306 118 85 chr2 33440692 33440784 -217247070 + L2 LINE L2 3182 3270 -2 22 0 0 0 chr2 33441073 33441095 -217246759 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 33441919 33441940 -217245914 + AT_rich Low_complexity Low_complexity 1 21 0 2172 102 6 26 chr2 33443791 33444104 -217243750 + AluSg SINE Alu 1 307 -3 417 213 97 39 chr2 33444181 33444336 -217243518 - MLT1K LTR MaLR -7 581 418 440 288 42 54 chr2 33444618 33444858 -217242996 + Charlie8 DNA MER1_type 3 239 -2178 2295 114 0 3 chr2 33445302 33445608 -217242246 + AluSq SINE Alu 1 305 -8 1893 161 58 6 chr2 33446293 33446640 -217241214 - MER47A DNA MER2_type 0 366 2 2505 213 60 5 chr2 33446840 33447699 -217240155 - L1M4 LINE L1 -2792 3852 2886 2346 96 0 0 chr2 33447709 33448010 -217239844 - AluSx SINE Alu -11 301 1 609 160 34 0 chr2 33448042 33448161 -217239693 - L1M4 LINE L1 -5346 1196 1074 1876 253 41 20 chr2 33448161 33448671 -217239183 - L1M4 LINE L1 -6012 530 10 245 367 19 19 chr2 33448699 33448857 -217238997 + MIR SINE MIR 48 205 -57 1988 288 32 14 chr2 33448969 33449563 -217238291 - MLT2E LTR ERVL -23 605 1 501 284 7 0 chr2 33450139 33450280 -217237574 - ERVL LTR ERVL -3223 2541 2400 474 65 0 0 chr2 33450281 33450343 -217237511 + (CA)n Simple_repeat Simple_repeat 1 62 0 735 326 67 54 chr2 33450691 33451671 -217236183 - ERVL LTR ERVL -3799 1965 973 270 233 0 0 chr2 33451873 33451933 -217235921 + L1MEc LINE L1 38 97 -6299 661 276 128 42 chr2 33451935 33452341 -217235513 - MLT1H1 LTR MaLR -1 554 114 301 267 40 0 chr2 33452350 33452451 -217235403 + L1MEc LINE L1 2058 2162 -4234 1964 126 10 39 chr2 33452452 33452762 -217235092 - AluSx SINE Alu -4 308 8 2246 91 6 31 chr2 33452806 33453125 -217234729 + AluSx SINE Alu 1 311 -1 10548 45 3 78 chr2 33453167 33454664 -217233190 - SVA Other Other -1 1385 1 893 177 0 6 chr2 33456475 33456633 -217231221 + Tigger1 DNA MER2_type 2 158 -2260 * 1078 109 86 52 chr2 33456621 33456714 -217231140 + Tigger1 DNA MER2_type 2202 2290 -128 2206 100 0 29 chr2 33456714 33457023 -217230831 - AluSq SINE Alu -12 301 2 1078 109 86 52 chr2 33457023 33457139 -217230715 + Tigger1 DNA MER2_type 2290 2418 0 231 333 0 0 chr2 33458324 33458390 -217229464 - MIR SINE MIR -2 260 195 211 326 0 0 chr2 33458381 33458424 -217229430 - MIR SINE MIR -197 65 23 * 377 88 73 0 chr2 33458431 33458499 -217229355 - L1MB2 LINE L1 0 6171 6099 834 160 46 0 chr2 33458499 33458630 -217229224 + FLAM_C SINE Alu 2 138 -5 2387 110 14 60 chr2 33458640 33459086 -217228768 - L1MB2 LINE L1 -61 6110 5686 967 173 14 24 chr2 33459365 33459573 -217228281 + MER20 DNA MER1_type 13 218 -1 1871 235 193 17 chr2 33459858 33460871 -217226983 + L2 LINE L2 2017 3213 -100 206 368 69 74 chr2 33460944 33461299 -217226555 - L2 LINE L2 -9 3263 2909 468 0 0 0 chr2 33461299 33461351 -217226503 + (TG)n Simple_repeat Simple_repeat 2 53 0 206 368 69 74 chr2 33461351 33461416 -217226438 - L2 LINE L2 -363 2909 2845 2410 78 0 34 chr2 33461642 33461962 -217225892 - AluSg SINE Alu -1 309 1 13699 125 19 25 chr2 33463261 33465184 -217222670 - Tigger1 DNA MER2_type 0 2418 508 792 199 0 0 chr2 33465184 33465360 -217222494 - L1MA6 LINE L1 -1 6299 6124 13699 125 19 25 chr2 33465360 33465759 -217222095 - Tigger1 DNA MER2_type -1910 508 108 1853 180 0 0 chr2 33465802 33466108 -217221746 - AluJb SINE Alu -6 306 1 316 179 73 24 chr2 33466114 33466237 -217221617 - L1MC5 LINE L1 -184 7777 7649 1314 208 51 10 chr2 33466240 33466466 -217221388 - MER114 LTR ERV -243 405 155 2816 16 0 6 chr2 33466466 33466783 -217221071 - AluYb8 SINE Alu -3 315 1 1314 208 51 10 chr2 33466783 33466945 -217220909 - MER114 LTR ERV -493 155 1 23 92 0 0 chr2 33467238 33467303 -217220551 + AT_rich Low_complexity Low_complexity 1 65 0 225 271 0 0 chr2 33467414 33467473 -217220381 - MER94 DNA DNA -72 62 4 266 300 166 50 chr2 33467963 33468699 -217219155 - L2 LINE L2 -961 2353 1533 690 287 100 13 chr2 33469208 33469438 -217218416 - MIR SINE MIR 0 262 13 262 278 153 49 chr2 33470167 33470311 -217217543 + MIR SINE MIR 94 252 -10 24 0 0 0 chr2 33471201 33471225 -217216629 + AT_rich Low_complexity Low_complexity 1 24 0 188 225 213 38 chr2 33471290 33471370 -217216484 + MIR3 SINE MIR 83 176 -32 1779 185 11 19 chr2 33471419 33471787 -217216067 + MER47A DNA MER2_type 1 365 -1 311 256 136 8 chr2 33471895 33472020 -217215834 - MIR3 SINE MIR -32 176 36 23 0 0 0 chr2 33472093 33472116 -217215738 + AT_rich Low_complexity Low_complexity 1 23 0 296 287 213 30 chr2 33472571 33472773 -217215081 + MIR SINE MIR 21 259 -3 639 182 67 125 chr2 33472943 33473200 -217214654 + MER33 DNA MER1_type 15 250 -2335 1912 143 24 0 chr2 33473200 33473487 -217214367 - AluSx SINE Alu -8 304 11 639 182 67 125 chr2 33473487 33473558 -217214296 + MER33 DNA MER1_type 250 324 0 21 0 0 0 chr2 33474065 33474086 -217213768 + AT_rich Low_complexity Low_complexity 1 21 0 2451 62 0 3 chr2 33474215 33474520 -217213334 - AluY SINE Alu -7 304 1 619 171 45 45 chr2 33474681 33474857 -217212997 - MER104 DNA MER2_type -1 179 4 2252 117 0 3 chr2 33475624 33475932 -217211922 - AluSx SINE Alu -5 307 1 1470 161 39 39 chr2 33476307 33476618 -217211236 + MER2 DNA MER2_type 3 313 -32 3987 165 32 30 chr2 33477340 33477964 -217209890 - L1MB8 LINE L1 -3 6175 5547 2175 129 3 0 chr2 33477964 33478274 -217209580 + AluSx SINE Alu 1 311 -1 3987 165 32 30 chr2 33478274 33478426 -217209428 - L1MB8 LINE L1 -631 5547 5397 2315 85 17 0 chr2 33478844 33479137 -217208717 - AluSx SINE Alu -14 298 1 204 40 0 0 chr2 33479643 33479668 -217208186 + (T)n Simple_repeat Simple_repeat 1 25 0 5604 79 34 53 chr2 33480435 33481628 -217206226 - SVA Other Other -518 868 62 1184 43 0 12 chr2 33481628 33481792 -217206062 + (GGGAGA)n Simple_repeat Simple_repeat 1 162 0 5604 79 34 53 chr2 33481792 33481853 -217206001 - SVA Other Other -1324 62 1 324 268 101 18 chr2 33482222 33482390 -217205464 - L1MDa LINE L1 -3855 2685 2504 300 53 0 0 chr2 33482653 33482691 -217205163 + (CA)n Simple_repeat Simple_repeat 1 38 0 288 275 147 32 chr2 33482921 33483230 -217204624 - L1MDa LINE L1 -800 2101 1663 21 71 0 0 chr2 33483556 33483598 -217204256 + AT_rich Low_complexity Low_complexity 1 42 0 976 231 5 0 chr2 33483608 33483794 -217204060 + MER58A DNA MER1_type 34 220 -4 1008 281 104 72 chr2 33483797 33484573 -217203281 - L1MDa LINE L1 -5307 1223 423 282 242 15 0 chr2 33484690 33484756 -217203098 + MIR SINE MIR 17 83 -179 1089 189 51 32 chr2 33484766 33484807 -217203047 - MER58A DNA MER1_type -2199 221 182 1735 170 77 12 chr2 33484807 33485130 -217202724 + MER2 DNA MER2_type 1 344 0 1089 189 51 32 chr2 33485130 33485305 -217202549 - MER58A DNA MER1_type -2238 182 1 390 190 50 33 chr2 33485306 33485410 -217202444 + MIR SINE MIR 89 197 -65 3932 155 26 8 chr2 33485410 33486034 -217201820 + MER41B LTR ERV1 1 635 0 390 190 50 33 chr2 33486034 33486050 -217201804 + MIR SINE MIR 197 211 -51 810 245 62 29 chr2 33486208 33486481 -217201373 - MLT1I LTR MaLR -25 384 103 683 265 61 13 chr2 33486497 33486838 -217201016 + LTR16A LTR ERVL 52 440 -10 331 266 43 11 chr2 33486970 33487064 -217200790 - MIR SINE MIR -1 261 165 792 210 7 0 chr2 33487123 33487266 -217200588 + MER58B DNA MER1_type 198 341 0 3028 113 64 43 chr2 33487357 33487547 -217200307 + MER4D LTR ERV1 1 186 -593 2096 122 3 3 chr2 33487547 33487843 -217200011 + AluSp SINE Alu 1 296 -17 3028 113 64 43 chr2 33487843 33488421 -217199433 + MER4D LTR ERV1 186 779 0 271 286 57 0 chr2 33489107 33489177 -217198677 - MIR SINE MIR -174 88 15 1685 136 99 7 chr2 33489417 33489690 -217198164 - AluJb SINE Alu -12 300 3 942 139 0 0 chr2 33489694 33489831 -217198023 - L1PB4 LINE L1 -1 6155 6019 216 218 18 0 chr2 33489878 33489933 -217197921 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 220 287 195 11 chr2 33490049 33490136 -217197718 - L2 LINE L2 -2 3270 3168 574 28 83 0 chr2 33491275 33491347 -217196507 - MADE1 DNA Mariner -2 78 1 2118 113 0 0 chr2 33491721 33492005 -217195849 + AluSx SINE Alu 1 284 -28 610 30 116 0 chr2 33492005 33492300 -217195554 + (TA)n Simple_repeat Simple_repeat 1 329 0 2441 72 0 0 chr2 33493081 33493372 -217194482 - AluSg SINE Alu -19 291 1 2118 99 0 51 chr2 33493926 33494238 -217193616 - AluSx SINE Alu -16 296 1 230 259 34 13 chr2 33494570 33494811 -217193043 + CT-rich Low_complexity Low_complexity 1 246 0 2153 131 3 6 chr2 33495692 33496004 -217191850 - AluSx SINE Alu -1 311 1 914 129 15 0 chr2 33496005 33496137 -217191717 - AluSq/x SINE Alu -178 134 1 249 57 0 0 chr2 33496149 33496184 -217191670 + (T)n Simple_repeat Simple_repeat 1 35 0 332 299 16 8 chr2 33496424 33496477 -217191377 - MIR3 SINE MIR -79 129 78 2669 75 53 8 chr2 33496477 33496836 -217191018 + THE1C LTR MaLR 1 375 0 332 299 16 8 chr2 33496836 33496909 -217190945 - MIR3 SINE MIR -130 78 2 182 354 73 0 chr2 33497363 33497445 -217190409 + L2 LINE L2 3141 3228 -44 809 126 0 0 chr2 33497548 33497659 -217190195 - HY1 scRNA scRNA -1 111 1 450 296 85 0 chr2 33497769 33497945 -217189909 - MIR3 SINE MIR -3 205 15 212 235 0 47 chr2 33499249 33499334 -217188520 + C-rich Low_complexity Low_complexity 2 82 0 21 89 0 0 chr2 33499476 33499532 -217188322 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 33499829 33499850 -217188004 + (CCG)n Simple_repeat Simple_repeat 1 21 0 216 125 0 42 chr2 33500030 33500078 -217187776 + (CCCG)n Simple_repeat Simple_repeat 4 49 0 723 198 87 52 chr2 33502466 33502482 -217185372 + AluSg/x SINE Alu 120 134 -178 2242 103 13 7 chr2 33502482 33502783 -217185071 + AluSx SINE Alu 1 303 -9 723 198 87 52 chr2 33502783 33502938 -217184916 + AluSg/x SINE Alu 134 297 -15 420 268 47 37 chr2 33503727 33503920 -217183934 + MIR SINE MIR 2 191 -64 1784 161 2 99 chr2 33506478 33506901 -217180953 - MLT1B LTR MaLR -6 384 3 273 271 239 32 chr2 33507192 33507347 -217180507 - MER5A DNA MER1_type -2 187 1 23 54 0 0 chr2 33507687 33507724 -217180130 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 33507835 33507864 -217179990 + AT_rich Low_complexity Low_complexity 1 29 0 8917 117 41 5 chr2 33508102 33509436 -217178418 - Tigger1 DNA MER2_type 0 2418 1037 3904 140 32 2 chr2 33509434 33510025 -217177829 - Tigger1 DNA MER2_type -1809 609 1 * 398 309 29 62 chr2 33510277 33510520 -217177334 + MIR SINE MIR 2 236 -26 383 165 25 0 chr2 33511749 33511828 -217176026 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 2159 125 0 0 chr2 33511829 33512124 -217175730 - AluSx SINE Alu -13 299 5 209 302 43 60 chr2 33512324 33512440 -217175414 + MIR SINE MIR 67 180 -82 204 182 0 73 chr2 33512497 33512552 -217175302 + L2 LINE L2 3171 3221 -92 339 25 0 0 chr2 33512606 33512646 -217175208 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 294 324 135 36 chr2 33512841 33513147 -217174707 - L2 LINE L2 -181 3132 2783 21 36 0 0 chr2 33513635 33513663 -217174191 + AT_rich Low_complexity Low_complexity 1 28 0 2425 80 3 0 chr2 33513871 33514170 -217173684 + AluSq SINE Alu 1 300 -13 785 204 87 0 chr2 33514977 33515149 -217172705 + MER5A DNA MER1_type 3 189 0 1863 149 0 21 chr2 33515430 33515718 -217172136 - AluJo SINE Alu -30 282 1 418 292 45 17 chr2 33515900 33516078 -217171776 + MER5A DNA MER1_type 7 189 0 22 80 0 0 chr2 33516934 33516984 -217170870 + AT_rich Low_complexity Low_complexity 1 50 0 2170 77 11 0 chr2 33516998 33517272 -217170582 + AluSc SINE Alu 31 307 -2 6180 226 46 21 chr2 33517390 33520187 -217167667 - L1MC1 LINE L1 -2 6400 3676 216 0 0 0 chr2 33520187 33520211 -217167643 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1563 166 12 4 chr2 33520217 33520470 -217167384 - AluSx SINE Alu -54 258 4 6180 226 46 21 chr2 33520470 33520921 -217166933 - L1MC1 LINE L1 -2730 3672 2161 1070 178 0 0 chr2 33520923 33521103 -217166751 - AluJb SINE Alu -4 308 129 2250 84 3 36 chr2 33521125 33521433 -217166421 - AluSx SINE Alu -14 298 1 387 0 0 0 chr2 33521437 33521480 -217166374 + (TG)n Simple_repeat Simple_repeat 2 44 0 13391 198 30 14 chr2 33521491 33523210 -217164644 - L1PA15 LINE L1 -13 6152 4462 375 41 0 0 chr2 33523210 33523259 -217164595 + (TG)n Simple_repeat Simple_repeat 2 50 0 13391 198 30 14 chr2 33523259 33524785 -217163069 - L1PA15 LINE L1 -1703 4462 2839 2032 151 58 28 chr2 33524785 33525149 -217162705 + THE1C LTR MaLR 1 375 0 13391 198 30 14 chr2 33525149 33525614 -217162240 - L1PA15 LINE L1 -3326 2839 2383 6927 111 23 13 chr2 33525649 33526836 -217161018 - L1MA1 LINE L1 0 7721 6520 4818 218 24 25 chr2 33526840 33528626 -217159228 - L1PA13 LINE L1 -3755 3829 2018 315 321 43 52 chr2 33529773 33530100 -217157754 - L1PA13 LINE L1 -7202 379 56 * 10934 150 42 23 chr2 33530078 33533511 -217154343 - L1MA1 LINE L1 -1647 5937 2478 1341 160 15 46 chr2 33533535 33533797 -217154057 - L1MCa LINE L1 -6167 259 6 2349 112 77 0 chr2 33533827 33534165 -217153689 + THE1B LTR MaLR 1 364 0 11010 92 35 26 chr2 33534165 33535730 -217152124 + THE1B-int LTR MaLR 1 1580 0 2546 118 3 6 chr2 33535730 33536095 -217151759 + THE1B LTR MaLR 1 364 0 199 292 62 0 chr2 33536604 33536669 -217151185 + L3b LINE CR1 1429 1497 -86 189 278 0 19 chr2 33536738 33536792 -217151062 - MIR SINE MIR -61 147 95 2286 64 3 37 chr2 33536847 33537172 -217150682 + AluSx SINE Alu 1 315 0 454 283 14 0 chr2 33537475 33537620 -217150234 - MIR SINE MIR -14 248 102 236 204 0 0 chr2 33537881 33537930 -217149924 - L2 LINE L2 -1 3312 3264 261 160 0 20 chr2 33538254 33538304 -217149550 + L2 LINE L2 3264 3312 -1 1049 281 42 85 chr2 33538578 33538720 -217149134 - MLT1K LTR MaLR -15 573 427 805 208 6 44 chr2 33538720 33538903 -217148951 - MER45A DNA AcHobo -2 176 1 1049 281 42 85 chr2 33538903 33539301 -217148553 - MLT1K LTR MaLR -161 427 56 204 267 89 40 chr2 33539710 33539811 -217148043 + MIR SINE MIR 33 138 -70 1477 225 97 36 chr2 33540019 33540485 -217147369 + MLT1D LTR MaLR 12 505 0 886 185 201 6 chr2 33541354 33541678 -217146176 - LTR37A LTR ERV1 0 426 40 569 250 199 9 chr2 33541948 33542164 -217145690 + MIR SINE MIR 6 262 0 968 147 0 0 chr2 33542183 33542319 -217145535 + FRAM SINE Alu 18 153 -23 320 346 21 56 chr2 33543920 33544154 -217143700 - L3 LINE CR1 -23 1554 1329 220 239 60 0 chr2 33544572 33544639 -217143215 - L2 LINE L2 -284 2988 2918 282 267 76 0 chr2 33545935 33546040 -217141814 - MIR3 SINE MIR -15 193 81 360 0 0 0 chr2 33546177 33546217 -217141637 + (TG)n Simple_repeat Simple_repeat 2 41 0 857 254 37 16 chr2 33546424 33546668 -217141186 - MIR SINE MIR -3 259 11 2471 81 0 0 chr2 33546677 33546974 -217140880 - AluSp SINE Alu -16 297 1 441 226 50 83 chr2 33546979 33547115 -217140739 + MER5B DNA MER1_type 2 132 -46 1668 199 24 0 chr2 33547115 33547402 -217140452 + AluJo SINE Alu 1 294 -18 441 226 50 83 chr2 33547402 33547446 -217140408 + MER5B DNA MER1_type 132 176 -2 365 205 26 0 chr2 33547533 33547611 -217140243 - MER5A DNA MER1_type -83 106 27 2397 74 0 26 chr2 33547707 33548018 -217139836 + AluY SINE Alu 1 303 -8 316 261 118 0 chr2 33548030 33548149 -217139705 - MIR SINE MIR -26 236 104 2095 164 28 19 chr2 33548325 33548685 -217139169 - MLT1A1 LTR MaLR -2 363 1 329 247 22 11 chr2 33548688 33548777 -217139077 - L2 LINE L2 -1 3271 3182 358 226 122 37 chr2 33548888 33549052 -217138802 - MIR SINE MIR -83 179 2 2211 103 0 0 chr2 33549087 33549392 -217138462 - AluSx SINE Alu 0 305 1 1725 182 24 0 chr2 33549436 33549733 -217138121 + AluJo SINE Alu 1 304 -8 394 313 66 24 chr2 33550269 33550435 -217137419 + MER5A DNA MER1_type 14 186 -3 2533 75 7 0 chr2 33550443 33550750 -217137104 + AluSc SINE Alu 1 309 0 1191 221 75 31 chr2 33550795 33551144 -217136710 + MLT1A2 LTR MaLR 9 372 -2 811 143 119 0 chr2 33551157 33551325 -217136529 + MER5A DNA MER1_type 1 188 -1 447 213 11 0 chr2 33551338 33551432 -217136422 + MER5A DNA MER1_type 10 104 -85 184 303 11 56 chr2 33551519 33551608 -217136246 + MER5B DNA MER1_type 35 119 -59 444 89 0 4 chr2 33551817 33552031 -217135823 + AluSg SINE Alu 1 292 -19 385 282 75 29 chr2 33552152 33552326 -217135528 - MER5A DNA MER1_type 0 189 8 243 322 44 0 chr2 33552361 33552451 -217135403 - MER5A DNA MER1_type -26 163 70 1905 131 89 145 chr2 33552458 33552940 -217134914 + LTR32 LTR ERVL 15 469 -2 949 211 11 0 chr2 33553487 33553672 -217134182 - MER5A DNA MER1_type -2 187 1 195 69 0 0 chr2 33554871 33554900 -217132954 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2005 134 0 0 chr2 33554908 33555185 -217132669 - AluSx SINE Alu -35 277 1 365 309 0 0 chr2 33555567 33555664 -217132190 - MIR SINE MIR -115 147 51 199 340 19 9 chr2 33555721 33555827 -217132027 + L3 LINE CR1 1119 1225 -352 2350 136 46 35 chr2 33555921 33556355 -217131499 + MER65A LTR ERV1 3 441 -4 401 113 75 0 chr2 33556617 33556697 -217131157 - L1MB8 LINE L1 0 6178 6093 1892 118 78 4 chr2 33556720 33556991 -217130863 + AluSx SINE Alu 1 291 -21 261 0 0 0 chr2 33556994 33557023 -217130831 + (TA)n Simple_repeat Simple_repeat 1 29 0 1187 245 136 45 chr2 33557357 33557802 -217130052 - MLT1G1 LTR MaLR -8 546 82 1995 127 38 0 chr2 33557802 33558094 -217129760 - AluSq SINE Alu -10 303 1 1187 245 136 45 chr2 33558094 33558172 -217129682 - MLT1G1 LTR MaLR -472 82 13 562 174 0 0 chr2 33558343 33558429 -217129425 - AluS SINE Alu -226 87 2 2268 106 7 3 chr2 33558589 33558890 -217128964 - AluSx SINE Alu -10 302 1 967 92 0 0 chr2 33559284 33559403 -217128451 - AluSx SINE Alu -24 288 170 652 83 0 0 chr2 33559403 33559487 -217128367 - AluSx SINE Alu -227 85 2 512 262 131 34 chr2 33559972 33560209 -217127645 - MIR SINE MIR 0 262 3 233 282 51 64 chr2 33560651 33560807 -217127047 - L1ME4a LINE L1 -14 6107 5954 1526 280 167 24 chr2 33560834 33561515 -217126339 - L2 LINE L2 -52 3261 2679 1610 213 108 16 chr2 33561515 33561943 -217125911 + MLT1C LTR MaLR 1 467 0 1526 280 167 24 chr2 33561943 33562507 -217125347 - L2 LINE L2 -634 2679 1823 281 256 84 89 chr2 33562507 33562552 -217125302 - L1ME4a LINE L1 -250 5871 5827 2207 95 6 15 chr2 33562552 33562878 -217124976 + L1MA4A LINE L1 5978 6300 -3 281 256 84 89 chr2 33562878 33562929 -217124925 - L1ME4a LINE L1 -294 5827 5777 2408 88 0 0 chr2 33562929 33563225 -217124629 - AluSc SINE Alu -13 296 1 281 256 84 89 chr2 33563225 33563318 -217124536 - L1ME4a LINE L1 -344 5777 5682 242 227 59 84 chr2 33563352 33563471 -217124383 - L1ME4a LINE L1 -509 5612 5497 2321 141 40 5 chr2 33563531 33563906 -217123948 + MLT1B LTR MaLR 3 390 0 21 36 0 0 chr2 33563991 33564019 -217123835 + AT_rich Low_complexity Low_complexity 1 28 0 232 298 39 112 chr2 33564148 33564433 -217123421 + L2 LINE L2 3007 3270 -2 214 331 143 8 chr2 33564773 33564906 -217122948 + L2 LINE L2 3121 3271 -1 232 182 0 23 chr2 33565372 33565416 -217122438 - L1ME LINE L1 -527 5594 5552 25 0 0 0 chr2 33565639 33565664 -217122190 + AT_rich Low_complexity Low_complexity 1 25 0 395 161 3 6 chr2 33567196 33567282 -217120572 - FLAM_A SINE Alu -2 131 69 2383 127 38 17 chr2 33567853 33568270 -217119584 - MSTA LTR MaLR -2 426 1 899 167 6 17 chr2 33568634 33568808 -217119046 - MER5B DNA MER1_type -6 172 1 25 0 0 0 chr2 33568911 33568936 -217118918 + AT_rich Low_complexity Low_complexity 1 25 0 2152 133 20 0 chr2 33568948 33569249 -217118605 + AluSx SINE Alu 1 307 -5 617 216 144 12 chr2 33569559 33569726 -217118128 - MER5A DNA MER1_type 0 189 1 2148 64 0 0 chr2 33569813 33570090 -217117764 - AluY SINE Alu 0 310 34 2089 139 7 0 chr2 33571533 33571842 -217116012 - AluSx SINE Alu -1 311 1 1548 154 53 53 chr2 33571920 33572219 -217115635 - AluJb SINE Alu -11 301 3 196 236 63 94 chr2 33572365 33572492 -217115362 + MIR3 SINE MIR 73 195 -13 26 0 0 0 chr2 33572582 33572608 -217115246 + AT_rich Low_complexity Low_complexity 1 26 0 608 282 66 13 chr2 33572718 33572945 -217114909 + MIR SINE MIR 8 246 -16 243 259 0 47 chr2 33574441 33574526 -217113328 + T-rich Low_complexity Low_complexity 5 85 0 976 271 4 0 chr2 33574640 33574880 -217112974 - MIR SINE MIR -4 258 18 1944 190 12 0 chr2 33574883 33575214 -217112640 - MER58B DNA MER1_type -1 340 6 738 262 106 67 chr2 33576280 33576685 -217111169 - L2 LINE L2 -2 3311 2891 2329 210 92 13 chr2 33576987 33577511 -217110343 - MLT1F1 LTR MaLR -2 565 1 997 222 88 50 chr2 33577650 33578073 -217109781 + L1MC5 LINE L1 7473 7911 -50 1132 246 117 32 chr2 33579002 33579408 -217108446 - L1ME3A LINE L1 -13 6140 5701 1709 150 13 17 chr2 33579406 33579706 -217108148 - L1MA9 LINE L1 0 6312 6014 2267 87 3 10 chr2 33579762 33580061 -217107793 + AluSc SINE Alu 1 297 -12 287 298 64 0 chr2 33580500 33580594 -217107260 - MIR SINE MIR 0 262 163 1337 101 0 0 chr2 33580595 33580764 -217107090 + AluSg SINE Alu 1 169 -141 2221 116 0 0 chr2 33581404 33581706 -217106148 + AluSx SINE Alu 3 304 -8 291 304 11 11 chr2 33581819 33581911 -217105943 - MIR SINE MIR -100 108 17 376 252 69 38 chr2 33583073 33583232 -217104622 - L1ME3A LINE L1 -2386 5405 5242 265 286 0 0 chr2 33583608 33583671 -217104183 - L2 LINE L2 0 3313 3251 26 0 0 0 chr2 33584849 33584875 -217102979 + AT_rich Low_complexity Low_complexity 1 26 0 234 260 0 0 chr2 33585297 33585347 -217102507 - L2 LINE L2 -8 3305 3256 435 226 111 69 chr2 33588245 33588334 -217099520 - L1ME3A LINE L1 -231 5939 5855 861 162 20 66 chr2 33588334 33588532 -217099322 - MER5A DNA MER1_type 0 189 1 435 226 111 69 chr2 33588532 33588664 -217099190 - L1ME3A LINE L1 -315 5855 5703 2334 100 0 0 chr2 33588664 33588965 -217098889 - AluSx SINE Alu -11 301 1 435 226 111 69 chr2 33588965 33589003 -217098851 - L1ME3A LINE L1 -467 5703 5668 448 229 132 14 chr2 33589019 33589163 -217098691 - MER112 DNA MER1_type -98 162 2 285 268 136 92 chr2 33589228 33589545 -217098309 - L1ME3A LINE L1 -1085 5044 4714 844 306 92 63 chr2 33589588 33589921 -217097933 - L1ME3A LINE L1 -5124 995 673 1699 199 0 7 chr2 33589921 33590227 -217097627 - AluJo SINE Alu -8 304 1 844 306 92 63 chr2 33590227 33590859 -217096995 - L1ME3A LINE L1 -5446 673 2 313 279 121 36 chr2 33593192 33593332 -217094522 - MIR SINE MIR -80 182 31 2369 94 3 0 chr2 33593480 33593789 -217094065 - AluSg SINE Alu 0 310 1 337 322 85 0 chr2 33593859 33593977 -217093877 - L2 LINE L2 -1 3271 3144 1324 208 33 42 chr2 33594029 33594424 -217093430 - L1ME3A LINE L1 -492 5678 5288 24183 78 3 3 chr2 33596336 33600234 -217087620 - L1PA7 LINE L1 0 6154 2241 2589 224 135 20 chr2 33600996 33601905 -217085949 + Charlie7 DNA MER1_type 1487 2500 -112 186 206 29 0 chr2 33601951 33601985 -217085869 - MIR3 SINE MIR -22 186 152 1868 147 0 17 chr2 33602038 33602337 -217085517 - AluJo SINE Alu -4 308 15 279 79 0 0 chr2 33602338 33602376 -217085478 + (T)n Simple_repeat Simple_repeat 1 38 0 350 335 13 33 chr2 33602838 33602945 -217084909 + MIR SINE MIR 5 110 -152 2299 77 32 0 chr2 33602945 33603230 -217084624 - AluSg SINE Alu -16 294 1 350 335 13 33 chr2 33603230 33603274 -217084580 + MIR SINE MIR 110 153 -109 1574 211 3 3 chr2 33603343 33603641 -217084213 + AluJo SINE Alu 2 299 -13 594 228 122 5 chr2 33604863 33605060 -217082794 - L1MC3 LINE L1 -672 7113 6894 2171 110 14 3 chr2 33605087 33605378 -217082476 - AluSx SINE Alu -18 294 1 1631 104 59 66 chr2 33605378 33605667 -217082187 - L1MC1 LINE L1 -4 6329 6043 488 127 0 0 chr2 33605669 33605748 -217082106 + pTR5 LTR ERV1 741 819 -1619 * 21573 75 5 8 chr2 33605741 33608536 -217079318 - HERV9 LTR ERV1 -4367 4032 1246 6319 94 135 75 chr2 33608735 33610201 -217077653 - pTR5 LTR ERV1 0 2438 741 240 132 0 0 chr2 33610202 33610240 -217077614 - L1MC1 LINE L1 -294 6039 6002 278 330 19 10 chr2 33610524 33610627 -217077227 - MIR3 SINE MIR -13 195 92 210 71 0 0 chr2 33612725 33612753 -217075101 + (TG)n Simple_repeat Simple_repeat 2 29 0 261 0 0 0 chr2 33612859 33612888 -217074966 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr2 33613082 33613112 -217074742 + AT_rich Low_complexity Low_complexity 1 30 0 3452 224 58 28 chr2 33613542 33614884 -217072970 - L1ME2 LINE L1 -10 6154 4774 561 155 21 21 chr2 33614884 33614981 -217072873 - Tigger7 DNA MER2_type 0 2587 2491 1060 155 48 138 chr2 33614984 33615274 -217072580 - Tigger7 DNA MER2_type -469 264 1 559 260 15 32 chr2 33615276 33615478 -217072376 - L1ME2 LINE L1 -1373 4773 4578 1771 167 98 9 chr2 33615486 33615905 -217071949 + Charlie1b DNA MER1_type 68 523 0 2007 245 84 80 chr2 33615905 33616058 -217071796 - L1ME2 LINE L1 -1566 4580 4429 2286 109 0 3 chr2 33616058 33616360 -217071494 - AluSg SINE Alu -9 301 1 2007 245 84 80 chr2 33616360 33616519 -217071335 - L1ME2 LINE L1 -1717 4429 4272 2362 244 38 10 chr2 33616519 33617023 -217070831 - LTR40a LTR ERVL 0 519 2 2007 245 84 80 chr2 33617023 33617487 -217070367 - L1ME2 LINE L1 -1874 4272 3794 1544 187 26 0 chr2 33617487 33617755 -217070099 + AluJo SINE Alu 6 280 -32 2007 245 84 80 chr2 33617755 33618120 -217069734 - L1ME2 LINE L1 -2352 3794 3432 374 265 108 32 chr2 33618226 33618411 -217069443 - L1 LINE L1 -821 5325 5127 3062 207 26 32 chr2 33618437 33619123 -217068731 + Cheshire DNA MER1_type 176 857 -1563 1593 130 8 28 chr2 33619124 33619378 -217068476 + AluJo SINE Alu 33 281 -31 3117 180 34 17 chr2 33619379 33619695 -217068159 + Cheshire DNA MER1_type 1476 1785 -635 1930 177 33 6 chr2 33619695 33620028 -217067826 - MER2 DNA MER2_type -2 342 1 3117 180 34 17 chr2 33620028 33620361 -217067493 + Cheshire DNA MER1_type 1785 2136 -284 574 139 0 0 chr2 33620386 33620472 -217067382 - L1MC/D LINE L1 -564 5678 5593 2113 165 20 28 chr2 33620472 33620867 -217066987 - L1MC1 LINE L1 0 6333 5942 1327 177 47 11 chr2 33620867 33621144 -217066710 + MER58D DNA MER1_type 100 386 0 294 296 112 8 chr2 33623041 33623166 -217064688 + MIR3 SINE MIR 34 171 -37 240 237 68 84 chr2 33623166 33623334 -217064520 - MER5A DNA MER1_type 0 189 2 849 246 94 79 chr2 33623387 33623717 -217064137 - MLT1F1 LTR MaLR -207 360 1 478 260 49 0 chr2 33623826 33623949 -217063905 - MLT1I LTR MaLR -10 399 271 448 230 0 11 chr2 33623958 33624045 -217063809 - MLT1I LTR MaLR -96 313 228 3263 139 100 129 chr2 33624088 33624966 -217062888 - MER21A LTR ERV1 -77 854 2 813 254 80 14 chr2 33624976 33625189 -217062665 - MLT1I LTR MaLR -175 234 8 2146 130 3 0 chr2 33625826 33626127 -217061727 - AluSx SINE Alu -3 309 8 2082 114 13 32 chr2 33626662 33626795 -217061059 + AluSx SINE Alu 1 135 -177 2473 74 0 3 chr2 33626795 33627104 -217060750 + AluY SINE Alu 1 308 -3 2082 114 13 32 chr2 33627104 33627301 -217060553 + AluSx SINE Alu 135 312 0 3140 131 65 48 chr2 33628291 33628749 -217059105 - LTR59 LTR ERV1 -5 592 120 2323 82 0 7 chr2 33628749 33629040 -217058814 - AluSc SINE Alu -18 291 3 3140 131 65 48 chr2 33629040 33629163 -217058691 - LTR59 LTR ERV1 -477 120 1 2678 132 44 2 chr2 33629523 33629933 -217057921 - MSTA LTR MaLR -1 427 1 1850 75 0 0 chr2 33631025 33631283 -217056571 - AluSc SINE Alu 0 339 82 195 309 41 31 chr2 33631379 33631476 -217056378 - L2 LINE L2 -44 3269 3172 2076 117 0 3 chr2 33632225 33632531 -217055323 - AluSx SINE Alu 0 309 5 1719 215 52 34 chr2 33633070 33633554 -217054300 - MER39 LTR ERV1 -1 706 1 302 322 0 0 chr2 33633554 33633641 -217054213 + (CATA)n Simple_repeat Simple_repeat 2 88 0 1687 174 116 25 chr2 33633842 33633884 -217053970 + MSTD LTR MaLR 1 38 -358 2786 83 16 16 chr2 33633884 33634259 -217053595 + THE1C LTR MaLR 1 375 0 1687 174 116 25 chr2 33634259 33634579 -217053275 + MSTD LTR MaLR 38 396 0 2129 83 83 3 chr2 33634644 33634932 -217052922 - AluY SINE Alu 0 311 1 1188 242 117 42 chr2 33637105 33637534 -217050320 + MLT1C LTR MaLR 7 467 0 643 278 90 18 chr2 33637759 33637982 -217049872 - MIR SINE MIR -16 246 8 313 209 0 30 chr2 33638264 33638331 -217049523 - MIR SINE MIR -11 251 187 30 0 0 0 chr2 33639077 33639107 -217048747 + AT_rich Low_complexity Low_complexity 1 30 0 1344 194 92 7 chr2 33639292 33639575 -217048279 - AluJo SINE Alu -5 307 1 2434 81 0 0 chr2 33640379 33640677 -217047177 + AluSg SINE Alu 1 298 -12 493 214 86 0 chr2 33640785 33640902 -217046952 + L2 LINE L2 3187 3313 0 26 30 0 0 chr2 33641021 33641054 -217046800 + AT_rich Low_complexity Low_complexity 1 33 0 2452 99 0 0 chr2 33641081 33641393 -217046461 + AluSx SINE Alu 1 312 0 1128 179 10 5 chr2 33641595 33641796 -217046058 + MER20 DNA MER1_type 18 219 0 650 313 61 4 chr2 33642678 33642901 -217044953 - MIR SINE MIR -11 251 18 221 245 0 19 chr2 33643352 33643405 -217044449 + (TG)n Simple_repeat Simple_repeat 1 52 0 249 330 43 64 chr2 33643536 33643724 -217044130 - MIR3 SINE MIR -9 199 16 193 273 0 0 chr2 33643754 33643798 -217044056 + L2 LINE L2 3226 3269 -3 197 302 139 23 chr2 33644189 33644275 -217043579 + MIR SINE MIR 71 166 -96 282 56 0 0 chr2 33644387 33644423 -217043431 + (CA)n Simple_repeat Simple_repeat 1 36 0 254 241 17 0 chr2 33645813 33645871 -217041983 + (TA)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 33646018 33646042 -217041812 + (CAT)n Simple_repeat Simple_repeat 2 25 0 25 0 0 0 chr2 33646514 33646539 -217041315 + AT_rich Low_complexity Low_complexity 1 25 0 438 246 8 23 chr2 33646609 33646731 -217041123 + MIR3 SINE MIR 68 187 -21 858 245 96 42 chr2 33647385 33647986 -217039868 + L1ME LINE L1 34 860 -5210 1567 299 31 11 chr2 33647987 33648625 -217039229 + L1ME LINE L1 972 1622 -4639 679 170 0 52 chr2 33648985 33649120 -217038734 + FLAM_A SINE Alu 14 141 -1 271 233 87 68 chr2 33649532 33649635 -217038219 - Charlie7 DNA MER1_type -2507 105 1 269 312 78 37 chr2 33649826 33650121 -217037733 - L1ME4a LINE L1 -106 6015 5709 * 355 280 104 53 chr2 33649940 33650517 -217037337 - L1MA6 LINE L1 -402 5898 5286 2041 105 10 27 chr2 33650650 33650946 -217036908 - AluSx SINE Alu -21 291 1 237 339 35 17 chr2 33651736 33651851 -217036003 - MIR3 SINE MIR -23 185 69 2825 181 57 25 chr2 33652740 33653338 -217034516 - L1MB4 LINE L1 -6 6174 5558 1050 188 24 24 chr2 33654435 33654648 -217033206 - MER20 DNA MER1_type -6 213 1 255 199 39 55 chr2 33654947 33655128 -217032726 + (TATG)n Simple_repeat Simple_repeat 1 178 0 321 173 33 53 chr2 33655161 33655311 -217032543 + (TATG)n Simple_repeat Simple_repeat 3 149 0 273 192 51 45 chr2 33655323 33655500 -217032354 + (TATG)n Simple_repeat Simple_repeat 1 178 0 262 197 41 48 chr2 33655535 33655682 -217032172 + (TATG)n Simple_repeat Simple_repeat 4 149 0 381 22 0 0 chr2 33655794 33655840 -217032014 + (TG)n Simple_repeat Simple_repeat 2 47 0 8755 115 17 52 chr2 33657366 33657649 -217030205 - Tigger1 DNA MER2_type -1 2417 2126 1956 133 14 0 chr2 33657649 33657927 -217029927 - AluSx SINE Alu -17 295 14 8755 115 17 52 chr2 33657927 33659082 -217028772 - Tigger1 DNA MER2_type -292 2126 1030 692 220 58 93 chr2 33659255 33659514 -217028340 - MER112 DNA MER1_type -3 257 8 193 250 0 0 chr2 33662059 33662103 -217025751 - MIR SINE MIR -125 137 94 960 153 0 7 chr2 33662309 33662453 -217025401 - FRAM SINE Alu -24 152 10 201 363 21 58 chr2 33665251 33665441 -217022413 + L3 LINE CR1 62 244 -1333 976 98 0 55 chr2 33665931 33666095 -217021759 - L1MB7 LINE L1 -320 5864 5710 1869 126 0 4 chr2 33666095 33666349 -217021505 - AluSx SINE Alu -59 253 1 347 179 214 0 chr2 33666447 33666531 -217021323 - MER58 DNA MER1_type -1 2419 2318 326 267 69 30 chr2 33666533 33666634 -217021220 - MER58 DNA MER1_type -110 105 1 1306 109 14 19 chr2 33667042 33667252 -217020602 + L1MB7 LINE L1 5585 5793 -391 459 185 0 0 chr2 33667252 33667344 -217020510 + (CA)n Simple_repeat Simple_repeat 1 92 0 1969 150 34 40 chr2 33667344 33667724 -217020130 + L1MB7 LINE L1 5788 6165 -19 225 83 0 0 chr2 33670398 33670434 -217017420 + (A)n Simple_repeat Simple_repeat 1 36 0 2258 92 3 7 chr2 33671760 33672064 -217015790 - AluY SINE Alu -8 303 1 231 279 15 0 chr2 33672330 33672398 -217015456 + (TATG)n Simple_repeat Simple_repeat 3 71 0 4961 74 13 11 chr2 33672398 33673033 -217014821 - L1PA14 LINE L1 -2 6159 5524 216 0 0 0 chr2 33673367 33673391 -217014463 + (T)n Simple_repeat Simple_repeat 1 24 0 327 259 36 39 chr2 33674294 33674440 -217013414 + MLT1H LTR MaLR 79 233 -182 260 267 0 0 chr2 33675965 33676025 -217011829 - MIR SINE MIR -12 250 191 22 56 0 0 chr2 33676204 33676240 -217011614 + AT_rich Low_complexity Low_complexity 1 36 0 2283 108 0 3 chr2 33676334 33676630 -217011224 + AluSx SINE Alu 1 295 -17 236 370 22 29 chr2 33677155 33677293 -217010561 + MIR SINE MIR 120 256 -6 2278 217 63 47 chr2 33677716 33677758 -217010096 - MLT1F1 LTR MaLR 0 567 527 2348 81 3 0 chr2 33677758 33678053 -217009801 + AluSg SINE Alu 1 296 -14 2278 217 63 47 chr2 33678053 33678445 -217009409 - MLT1F1 LTR MaLR -40 527 120 823 180 8 0 chr2 33678445 33678573 -217009281 - FLAM_C SINE Alu -2 131 3 2278 217 63 47 chr2 33678573 33678695 -217009159 - MLT1F1 LTR MaLR -447 120 1 231 226 94 94 chr2 33682088 33682247 -217005607 - L1ME3A LINE L1 -38 6132 5974 514 248 132 74 chr2 33682366 33682813 -217005041 - HAL1 LINE L1 -9 2498 2026 2314 101 3 7 chr2 33683062 33683368 -217004486 - AluSq SINE Alu -8 305 1 260 198 0 121 chr2 33684410 33684501 -217003353 - L2 LINE L2 0 3272 3193 433 221 158 8 chr2 33684565 33684692 -217003162 + MER5A DNA MER1_type 4 149 -40 328 244 205 8 chr2 33684597 33684724 -217003130 - MER5A DNA MER1_type -24 165 14 * 2367 92 7 0 chr2 33684970 33685264 -217002590 + AluSg SINE Alu 1 296 -14 192 345 17 0 chr2 33685389 33685447 -217002407 - L2 LINE L2 -681 2633 2575 215 299 86 40 chr2 33685737 33685911 -217001943 - L2 LINE L2 -1010 2304 2123 198 265 0 0 chr2 33687881 33687930 -216999924 - L2 LINE L2 -5 3267 3219 505 259 143 5 chr2 33688517 33688706 -216999148 + MIR SINE MIR 20 234 -28 2037 150 32 9 chr2 33689709 33690049 -216997805 + MER7A DNA MER2_type 1 346 0 2448 46 0 3 chr2 33690358 33690640 -216997214 - AluY SINE Alu 0 311 31 1830 145 34 30 chr2 33691169 33691465 -216996389 + AluJb SINE Alu 1 297 -15 605 222 99 12 chr2 33692249 33692411 -216995443 + FRAM SINE Alu 1 176 0 2204 112 0 10 chr2 33692909 33693205 -216994649 + AluSx SINE Alu 3 295 -17 265 254 151 0 chr2 33693410 33693536 -216994318 - MER113 DNA MER1_type? -345 176 32 264 252 89 59 chr2 33693621 33693756 -216994098 - MER5B DNA MER1_type -29 149 11 365 242 43 75 chr2 33695318 33695479 -216992375 - MARNA DNA Mariner -355 231 76 213 178 0 0 chr2 33697264 33697309 -216990545 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 23 0 0 0 chr2 33697663 33697686 -216990168 + AT_rich Low_complexity Low_complexity 1 23 0 383 121 0 0 chr2 33697923 33697981 -216989873 + Alu SINE Alu 245 302 0 206 227 0 0 chr2 33698209 33698253 -216989601 - MIR SINE MIR -1 261 218 2506 72 0 7 chr2 33698548 33698853 -216989001 + AluSq SINE Alu 1 303 -10 222 37 0 0 chr2 33698853 33698880 -216988974 + (TA)n Simple_repeat Simple_repeat 2 28 0 948 78 78 0 chr2 33699940 33700069 -216987785 + MER85 DNA T2_type 1 139 0 210 313 76 23 chr2 33700850 33700981 -216986873 + MIR SINE MIR 75 212 -50 303 282 84 15 chr2 33701337 33701468 -216986386 + MIR3 SINE MIR 2 141 -67 195 100 0 0 chr2 33701850 33701880 -216985974 + (TC)n Simple_repeat Simple_repeat 2 31 0 315 0 0 0 chr2 33701880 33701915 -216985939 + (CA)n Simple_repeat Simple_repeat 1 35 0 401 221 76 19 chr2 33702036 33702194 -216985660 - L1ME4a LINE L1 -11 6110 5944 1816 249 97 14 chr2 33702256 33702770 -216985084 - MER115 DNA AcHobo 0 693 137 336 24 0 0 chr2 33703064 33703105 -216984749 + (TG)n Simple_repeat Simple_repeat 2 42 0 386 141 16 0 chr2 33703137 33703201 -216984653 - MER20 DNA MER1_type -11 208 144 1707 103 0 5 chr2 33703201 33703468 -216984386 - AluSc SINE Alu 0 323 58 283 182 0 0 chr2 33703489 33703533 -216984321 - MER20 DNA MER1_type -172 47 4 621 221 91 20 chr2 33703534 33703788 -216984066 + L1ME3A LINE L1 961 1232 -4887 602 218 39 57 chr2 33703866 33703973 -216983881 + L1ME3A LINE L1 4356 4463 -1666 391 141 26 13 chr2 33703973 33704051 -216983803 + L1MA5A LINE L1 6219 6297 0 602 218 39 57 chr2 33704051 33704223 -216983631 + L1ME3A LINE L1 4463 4630 -1499 5970 161 30 7 chr2 33704244 33706139 -216981715 + L1PA14 LINE L1 4222 6158 -3 1604 243 68 58 chr2 33706171 33706808 -216981046 + L1ME3A LINE L1 5303 5945 -208 1720 78 9 0 chr2 33708499 33708718 -216979136 - AluSp SINE Alu -1 312 92 1442 250 103 53 chr2 33708813 33709378 -216978476 + MLT1E LTR MaLR 1 593 0 1674 130 31 0 chr2 33710277 33710538 -216977316 + MSTB1 LTR MaLR 1 269 -163 913 132 0 15 chr2 33710538 33710674 -216977180 - FLAM_C SINE Alu -9 134 1 1156 139 0 6 chr2 33710674 33710846 -216977008 + MSTB1 LTR MaLR 262 432 0 252 206 15 29 chr2 33710846 33710914 -216976940 - MER103 DNA DNA -46 120 54 279 280 60 30 chr2 33711356 33711456 -216976398 - L2 LINE L2 -1 3312 3210 23 33 0 0 chr2 33711666 33711696 -216976158 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 33711878 33711906 -216975948 + AT_rich Low_complexity Low_complexity 1 28 0 298 248 111 20 chr2 33712217 33712370 -216975484 + MIR SINE MIR 20 186 -76 194 135 0 27 chr2 33713544 33713581 -216974273 + MER5B DNA MER1_type 18 53 -125 * 211 169 195 26 chr2 33713548 33713625 -216974229 - MER5A DNA MER1_type -21 168 79 956 238 19 0 chr2 33713754 33713960 -216973894 - MER63A DNA MER1_type 0 210 1 355 113 19 0 chr2 33715610 33715663 -216972191 + MER5A DNA MER1_type 14 67 -122 241 336 69 0 chr2 33715908 33716024 -216971830 + MIR SINE MIR 28 151 -111 714 248 48 17 chr2 33716039 33716269 -216971585 - MIR SINE MIR -18 244 8 1743 54 0 5 chr2 33716533 33716738 -216971116 - AluY SINE Alu -18 293 90 1853 116 55 68 chr2 33716741 33717121 -216970733 + THE1C LTR MaLR 1 375 0 219 167 21 21 chr2 33718035 33718083 -216969771 + (CCCCG)n Simple_repeat Simple_repeat 5 52 0 196 348 29 22 chr2 33718950 33719088 -216968766 + L3b LINE CR1 1165 1303 -280 2244 118 48 25 chr2 33719392 33719748 -216968106 + THE1B LTR MaLR 1 364 0 11153 78 17 72 chr2 33719748 33720129 -216967725 + THE1B-int LTR MaLR 1 401 -1179 606 117 0 0 chr2 33720129 33720223 -216967631 - AluSc SINE Alu -1 308 215 11153 78 17 72 chr2 33720223 33721420 -216966434 + THE1B-int LTR MaLR 401 1580 0 2316 110 48 25 chr2 33721420 33721776 -216966078 + THE1B LTR MaLR 1 364 0 2989 90 27 25 chr2 33722210 33722253 -216965601 - MLT2A1 LTR ERVL 0 444 403 609 100 0 0 chr2 33722253 33722343 -216965511 + (TA)n Simple_repeat Simple_repeat 2 91 0 2989 90 27 25 chr2 33722343 33722742 -216965112 - MLT2A1 LTR ERVL -41 403 1 2605 102 14 6 chr2 33723376 33723737 -216964117 + THE1B LTR MaLR 1 364 0 992 296 65 12 chr2 33723903 33724305 -216963549 + LTR16A LTR ERVL 1 423 -27 237 178 32 185 chr2 33724502 33724659 -216963195 - MLT1K LTR MaLR -2 586 454 1123 228 95 58 chr2 33724973 33725007 -216962847 - MLT2B1 LTR ERVL -6 514 483 216 0 0 0 chr2 33725007 33725031 -216962823 + (TG)n Simple_repeat Simple_repeat 2 25 0 1123 228 95 58 chr2 33725031 33725321 -216962533 - MLT2B1 LTR ERVL -37 483 178 850 225 38 0 chr2 33725353 33725566 -216962288 + L1M4 LINE L1 2572 2792 -3354 238 200 144 67 chr2 33725566 33725656 -216962198 - MLT1F LTR MaLR -443 99 3 2118 118 24 0 chr2 33727593 33727880 -216959974 - AluSx SINE Alu -18 294 1 225 179 0 0 chr2 33728181 33728220 -216959634 + MARNA DNA Mariner 199 237 -349 1830 110 26 71 chr2 33728483 33728793 -216959061 + AluSg SINE Alu 1 296 -14 297 241 11 11 chr2 33728993 33729080 -216958774 - ALR/Alpha Satellite centromeric -16 156 70 441 206 169 38 chr2 33730013 33730173 -216957681 - MER5A DNA MER1_type 0 189 9 243 262 49 0 chr2 33731274 33731335 -216956519 + MIR SINE MIR 28 91 -171 546 336 20 25 chr2 33731340 33731584 -216956270 + MIR SINE MIR 18 260 -2 506 241 89 35 chr2 33732561 33732764 -216955090 - L1ME3A LINE L1 -169 6001 5788 679 233 93 28 chr2 33732934 33733149 -216954705 + MIR SINE MIR 34 262 0 255 314 16 47 chr2 33733215 33733406 -216954448 + L2 LINE L2 2879 3063 -209 48 18 0 0 chr2 33733475 33733530 -216954324 + AT_rich Low_complexity Low_complexity 1 55 0 499 196 59 0 chr2 33733639 33733741 -216954113 + Charlie1a DNA MER1_type 93 200 -1255 555 99 0 12 chr2 33733743 33733824 -216954030 + AluSx SINE Alu 2 81 -231 733 95 0 0 chr2 33733824 33733919 -216953935 - LTR12 LTR ERV1 -8 706 612 323 191 34 22 chr2 33733919 33734008 -216953846 - LTR30 LTR ERV1 -80 642 553 1667 84 0 68 chr2 33734009 33734259 -216953595 - LTR12 LTR ERV1 -429 285 53 270 231 0 0 chr2 33734259 33734311 -216953543 - LTR30 LTR ERV1 -670 52 1 1747 116 0 4 chr2 33734311 33734553 -216953301 + AluSx SINE Alu 69 309 -1 2515 199 40 31 chr2 33734556 33735103 -216952751 + Charlie1a DNA MER1_type 192 743 -712 5191 138 40 60 chr2 33735150 33735853 -216952001 - L1MA7 LINE L1 -14 6277 5561 712 186 0 24 chr2 33735853 33735977 -216951877 + FLAM_A SINE Alu 1 121 -12 5191 138 40 60 chr2 33735977 33736309 -216951545 - L1MA7 LINE L1 -730 5561 5274 1691 181 20 13 chr2 33736309 33736613 -216951241 - AluJo SINE Alu -6 306 1 5191 138 40 60 chr2 33736613 33736808 -216951046 - L1MA7 LINE L1 -1017 5274 5077 2266 83 0 4 chr2 33737222 33737500 -216950354 + AluSc SINE Alu 1 277 -32 204 67 0 0 chr2 33737500 33737530 -216950324 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 696 231 24 52 chr2 33737864 33738102 -216949752 - L1MD3 LINE L1 -1 7994 6024 414 39 0 0 chr2 33738121 33738173 -216949681 + (TG)n Simple_repeat Simple_repeat 1 52 0 2159 104 4 0 chr2 33738173 33738451 -216949403 - AluSx SINE Alu -33 279 1 332 279 58 0 chr2 33738628 33738732 -216949122 + MIR SINE MIR 80 189 -73 982 287 102 18 chr2 33738783 33739201 -216948653 - LTR16A LTR ERVL 0 450 1 1843 170 7 0 chr2 33740130 33740418 -216947436 + AluJo SINE Alu 1 290 -22 464 291 108 24 chr2 33741017 33741230 -216946624 + MIR SINE MIR 32 262 0 1789 190 46 3 chr2 33741416 33741805 -216946049 + L1 LINE L1 4114 4519 -1627 387 0 0 0 chr2 33741805 33741848 -216946006 + (TCTCCC)n Simple_repeat Simple_repeat 6 48 0 309 298 32 0 chr2 33741857 33741981 -216945873 - L1M4 LINE L1 -2946 3200 3073 309 305 25 0 chr2 33741952 33742070 -216945784 - L1M4 LINE L1 -2953 3193 3073 1242 100 0 0 chr2 33742082 33742262 -216945592 + (T)n Simple_repeat Simple_repeat 1 180 0 7159 64 11 62 chr2 33743264 33745689 -216942165 + SVA Other Other 373 1386 0 5556 109 41 18 chr2 33745689 33746652 -216941202 + L1PA16 LINE L1 4508 5507 -659 2371 96 3 13 chr2 33746652 33746965 -216940889 + AluSx SINE Alu 1 310 -2 5556 109 41 18 chr2 33746965 33747632 -216940222 + L1PA16 LINE L1 5507 6157 -9 2276 94 0 0 chr2 33747650 33747938 -216939916 - AluSx SINE Alu -24 288 1 25 0 0 0 chr2 33748011 33748036 -216939818 + AT_rich Low_complexity Low_complexity 1 25 0 1667 202 104 60 chr2 33748185 33748329 -216939525 + MER114 LTR ERV 19 155 -493 2371 70 0 3 chr2 33748329 33748656 -216939198 + AluY SINE Alu 1 326 0 1667 202 104 60 chr2 33748656 33749005 -216938849 + MER114 LTR ERV 155 544 -104 802 226 0 63 chr2 33749005 33749114 -216938740 + MER45A DNA AcHobo 1 95 -1486 2075 131 0 0 chr2 33749114 33749405 -216938449 - AluSx SINE Alu -16 296 6 802 226 0 63 chr2 33749405 33749485 -216938369 + MER45A DNA AcHobo 95 178 0 1667 202 104 60 chr2 33749485 33749554 -216938300 + MER114 LTR ERV 544 608 -40 3568 90 45 4 chr2 33749583 33750072 -216937782 - MER75 DNA T2_type -5 509 1 2371 196 57 75 chr2 33750624 33750834 -216937020 + L1MA9 LINE L1 5455 5667 -636 2353 113 3 0 chr2 33750834 33751145 -216936709 + AluSx SINE Alu 1 312 0 2371 196 57 75 chr2 33751145 33751800 -216936054 + L1MA9 LINE L1 5667 6277 -26 693 138 41 0 chr2 33754242 33754365 -216933489 - L1MB4 LINE L1 0 6180 6053 6171 44 3 0 chr2 33754837 33755582 -216932272 + L1PA5 LINE L1 5401 6147 -7 2208 145 0 0 chr2 33755824 33756135 -216931719 - AluSx SINE Alu -1 311 1 2020 112 3 75 chr2 33756722 33757044 -216930810 - AluSx SINE Alu -13 299 1 379 241 74 18 chr2 33758512 33758715 -216929139 - MLT1L LTR MaLR 0 615 367 954 136 0 0 chr2 33759168 33759308 -216928546 - AluJ SINE Alu -15 297 158 636 135 58 0 chr2 33759309 33759413 -216928441 - AluJ SINE Alu -201 111 2 856 209 0 12 chr2 33759414 33759577 -216928277 - FRAM SINE Alu -2 164 4 382 305 8 0 chr2 33759593 33759711 -216928143 + L2 LINE L2 3195 3313 0 934 203 50 0 chr2 33759766 33759809 -216928045 + MIR SINE MIR 48 87 -175 1777 148 0 43 chr2 33759809 33760135 -216927719 - AluJb SINE Alu 0 312 1 934 203 50 0 chr2 33760135 33760293 -216927561 + MIR SINE MIR 87 259 -3 323 167 143 0 chr2 33760316 33760400 -216927454 + MIR SINE MIR 97 192 -70 237 292 69 56 chr2 33760526 33760670 -216927184 - MIR SINE MIR -75 187 42 4852 105 52 64 chr2 33760815 33761646 -216926208 - LTR12 LTR ERV1 -1 825 5 2494 192 37 24 chr2 33761661 33762256 -216925598 - pTR5 LTR ERV1 -1093 1345 743 5501 150 99 78 chr2 33762324 33762910 -216924944 + L1MC3 LINE L1 6494 7066 -719 252 263 38 12 chr2 33762910 33762990 -216924864 + MLT1F1 LTR MaLR 35 116 -451 5501 150 99 78 chr2 33762990 33763581 -216924273 + L1MC3 LINE L1 7066 7776 -9 1402 183 76 64 chr2 33763617 33763780 -216924074 + L1MEc LINE L1 2162 2321 -3894 2329 114 0 9 chr2 33763780 33764095 -216923759 + AluSx SINE Alu 1 312 0 1402 183 76 64 chr2 33764095 33764493 -216923361 + L1MEc LINE L1 2321 2687 -3528 1636 228 45 91 chr2 33764526 33765339 -216922515 - L1MEc LINE L1 -4050 2346 1575 1949 126 16 38 chr2 33765339 33765656 -216922198 + AluSx SINE Alu 1 310 -2 1636 228 45 91 chr2 33765656 33765718 -216922136 - L1MEc LINE L1 -4821 1575 1512 1499 155 41 48 chr2 33765780 33766071 -216921783 - AluJb SINE Alu 0 312 24 347 284 71 15 chr2 33766074 33766271 -216921583 - L1MEc LINE L1 -5098 1298 1091 4616 115 18 40 chr2 33766700 33767466 -216920388 + L1MA9 LINE L1 5559 6307 -5 401 222 0 0 chr2 33767799 33767880 -216919974 - MARNA DNA Mariner -16 570 490 326 333 63 0 chr2 33767898 33768057 -216919797 + MER117 DNA MER1_type 29 197 0 246 287 139 0 chr2 33768060 33768161 -216919693 + MIR SINE MIR 12 126 -136 247 263 62 25 chr2 33768261 33768341 -216919513 + MARNA DNA Mariner 84 166 -420 2347 171 9 119 chr2 33768389 33768968 -216918886 + MLT2B2 LTR ERVL 1 515 0 866 263 29 29 chr2 33768978 33769286 -216918568 + MARNA DNA Mariner 262 569 -17 1705 149 22 53 chr2 33769601 33769923 -216917931 + AluJo SINE Alu 1 312 0 388 308 105 0 chr2 33770084 33770217 -216917637 + MER115 DNA AcHobo 1 147 -546 1308 189 117 7 chr2 33770218 33770740 -216917114 + MLT1E1 LTR MaLR 1 638 -16 303 219 73 0 chr2 33770789 33770871 -216916983 + MER5C DNA MER1_type 37 124 -200 21 0 0 0 chr2 33770877 33770898 -216916956 + AT_rich Low_complexity Low_complexity 1 21 0 1475 281 29 56 chr2 33770963 33771515 -216916339 + MER115 DNA AcHobo 157 693 0 1390 157 73 76 chr2 33771722 33772193 -216915661 + MSTD LTR MaLR 15 396 0 2078 206 34 26 chr2 33772314 33772815 -216915039 + MLT1D LTR MaLR 1 505 0 210 322 66 44 chr2 33774322 33774505 -216913349 - MIR SINE MIR -70 192 6 29 0 0 0 chr2 33774747 33774776 -216913078 + AT_rich Low_complexity Low_complexity 1 29 0 1914 138 14 0 chr2 33774776 33775059 -216912795 - AluJb SINE Alu -25 287 1 817 146 110 12 chr2 33775067 33775231 -216912623 - L1MA2 LINE L1 0 6304 6125 315 223 50 0 chr2 33776616 33776722 -216911132 - MIR SINE MIR -66 196 85 392 328 16 0 chr2 33777192 33777320 -216910534 - MIR SINE MIR -126 136 7 561 255 25 12 chr2 33777442 33777603 -216910251 - MIR SINE MIR -70 192 30 627 198 0 0 chr2 33777606 33777717 -216910137 + FLAM_A SINE Alu 21 131 -11 517 103 10 31 chr2 33777717 33777814 -216910040 - Charlie5 DNA MER1_type -112 2500 2406 * 1191 184 40 32 chr2 33777813 33778063 -216909791 - Charlie5 DNA MER1_type -2346 266 15 2231 111 0 25 chr2 33778673 33778811 -216909043 + AluSg SINE Alu 1 141 -169 2207 95 0 48 chr2 33778811 33779127 -216908727 + AluSp SINE Alu 1 301 -12 2231 111 0 25 chr2 33779127 33779303 -216908551 + AluSg SINE Alu 141 307 -3 417 86 0 0 chr2 33780861 33780919 -216906935 + (GA)n Simple_repeat Simple_repeat 1 58 0 3201 178 31 12 chr2 33781101 33781507 -216906347 + L1M4 LINE L1 4668 5065 -1113 2084 142 0 0 chr2 33781507 33781810 -216906044 - AluSx SINE Alu -9 303 1 3201 178 31 12 chr2 33781810 33782533 -216905321 + L1M4 LINE L1 5065 5822 -356 1191 170 97 76 chr2 33782534 33782823 -216905031 - AluJb SINE Alu -7 295 1 1754 143 18 122 chr2 33782824 33782964 -216904890 - L1MB5 LINE L1 -137 6037 5884 207 114 0 0 chr2 33782964 33782999 -216904855 + (TG)n Simple_repeat Simple_repeat 2 36 0 1754 143 18 122 chr2 33782999 33783133 -216904721 - L1MB5 LINE L1 -290 5884 5822 450 0 0 0 chr2 33783133 33783183 -216904671 + (TA)n Simple_repeat Simple_repeat 2 51 0 1754 143 18 122 chr2 33783183 33783342 -216904512 - L1MB5 LINE L1 -352 5822 5648 237 311 67 43 chr2 33783456 33783620 -216904234 - MIR3 SINE MIR -2 206 39 228 227 125 0 chr2 33783856 33783944 -216903910 - MER102b DNA MER1_type -1 340 242 2146 134 0 0 chr2 33785109 33785408 -216902446 - AluSx SINE Alu -13 299 1 339 25 0 0 chr2 33786994 33787034 -216900820 + (TG)n Simple_repeat Simple_repeat 1 40 0 529 14 29 0 chr2 33787034 33787104 -216900750 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 2288 96 0 43 chr2 33787197 33787398 -216900456 + AluSx SINE Alu 1 184 -128 2525 68 3 0 chr2 33787398 33787693 -216900161 - AluY SINE Alu -15 296 1 2288 96 0 43 chr2 33787693 33787815 -216900039 + AluSx SINE Alu 184 310 -2 967 292 80 41 chr2 33788030 33788159 -216899695 + L2 LINE L2 2460 2583 -730 2240 144 55 0 chr2 33788159 33788506 -216899348 - MER47A DNA MER2_type 0 366 1 967 292 80 41 chr2 33788506 33788953 -216898901 + L2 LINE L2 2583 3084 -229 2312 116 0 0 chr2 33788953 33789263 -216898591 - AluSq SINE Alu -3 310 1 967 292 80 41 chr2 33789263 33789502 -216898352 + L2 LINE L2 3084 3312 -1 244 323 40 91 chr2 33789507 33789664 -216898190 - L3 LINE CR1 -193 1384 1247 2239 100 0 23 chr2 33789664 33789965 -216897889 - AluSq SINE Alu -19 294 1 244 323 40 91 chr2 33789965 33790104 -216897750 - L3 LINE CR1 -330 1247 1103 180 0 0 0 chr2 33790107 33790127 -216897727 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2550 63 0 3 chr2 33790149 33790451 -216897403 + AluY SINE Alu 7 307 -4 317 330 18 9 chr2 33790608 33790717 -216897137 - L3 LINE CR1 -1432 145 36 30 0 0 0 chr2 33790725 33790755 -216897099 + AT_rich Low_complexity Low_complexity 1 30 0 848 163 26 18 chr2 33790930 33791317 -216896537 + CT-rich Low_complexity Low_complexity 1 390 0 1536 39 0 0 chr2 33791348 33791759 -216896095 + (G)n Simple_repeat Simple_repeat 1 411 0 22 0 0 0 chr2 33792794 33792816 -216895038 + AT_rich Low_complexity Low_complexity 1 22 0 227 286 7 38 chr2 33792849 33793050 -216894804 + A-rich Low_complexity Low_complexity 1 194 0 214 261 7 42 chr2 33793245 33793387 -216894467 + A-rich Low_complexity Low_complexity 2 138 0 267 300 0 0 chr2 33793429 33793529 -216894325 + A-rich Low_complexity Low_complexity 1 100 0 2266 89 3 3 chr2 33794663 33794954 -216892900 + AluSg SINE Alu 1 291 -19 2299 93 0 13 chr2 33794966 33795268 -216892586 - AluSx SINE Alu -14 298 1 248 333 133 7 chr2 33796082 33796217 -216891637 + MIR SINE MIR 2 153 -109 2085 103 20 33 chr2 33796350 33796652 -216891202 - AluSq SINE Alu -15 298 1 2118 141 7 0 chr2 33796653 33796959 -216890895 - AluSx SINE Alu -4 308 1 450 310 47 43 chr2 33797082 33797193 -216890661 + MIR SINE MIR 30 139 -123 2350 102 76 12 chr2 33797193 33797535 -216890319 - THE1B LTR MaLR 0 364 1 450 310 47 43 chr2 33797535 33797655 -216890199 + MIR SINE MIR 139 262 0 1005 82 0 0 chr2 33799068 33799190 -216888664 + AluSp SINE Alu 11 132 -181 2171 115 24 0 chr2 33799192 33799488 -216888366 + AluSp SINE Alu 1 303 -10 2298 121 0 10 chr2 33800059 33800373 -216887481 + AluSx SINE Alu 1 311 -1 994 216 28 18 chr2 33801301 33801519 -216886335 + MER58A DNA MER1_type 1 220 -4 212 270 61 61 chr2 33802340 33802536 -216885318 - L2 LINE L2 -188 3084 2889 205 268 54 0 chr2 33802541 33802597 -216885257 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 220 289 141 33 chr2 33803325 33803446 -216884408 - L2 LINE L2 0 3272 3139 2064 126 7 7 chr2 33803664 33803966 -216883888 + AluSx SINE Alu 1 302 -10 545 213 192 25 chr2 33804283 33804523 -216883331 - L1ME4a LINE L1 -4 6117 5838 305 268 101 18 chr2 33805148 33805316 -216882538 - L1MDa LINE L1 -3855 2685 2504 264 59 0 0 chr2 33805579 33805613 -216882241 + (CA)n Simple_repeat Simple_repeat 1 34 0 270 275 147 32 chr2 33805843 33806152 -216881702 - L1MDa LINE L1 -800 2101 1663 21 71 0 0 chr2 33806478 33806520 -216881334 + AT_rich Low_complexity Low_complexity 1 42 0 953 237 5 0 chr2 33806530 33806716 -216881138 + MER58A DNA MER1_type 34 220 -4 979 269 114 82 chr2 33806726 33807495 -216880359 - L1MDa LINE L1 -5314 1216 423 262 254 0 0 chr2 33807612 33807675 -216880179 + MIR SINE MIR 17 79 -183 1072 194 51 32 chr2 33807688 33807729 -216880125 - MER58A DNA MER1_type -2199 221 182 1606 173 77 12 chr2 33807729 33808052 -216879802 + MER2 DNA MER2_type 1 344 0 1072 194 51 32 chr2 33808052 33808227 -216879627 - MER58A DNA MER1_type -2238 182 1 352 190 50 33 chr2 33808228 33808332 -216879522 + MIR SINE MIR 89 197 -65 3770 154 26 5 chr2 33808332 33808954 -216878900 + MER41B LTR ERV1 1 635 0 352 190 50 33 chr2 33808954 33808970 -216878884 + MIR SINE MIR 197 211 -51 830 242 62 29 chr2 33809128 33809401 -216878453 - MLT1I LTR MaLR -25 384 103 673 268 38 11 chr2 33809417 33809758 -216878096 + LTR16A LTR ERVL 52 440 -10 306 266 43 11 chr2 33809890 33809984 -216877870 - MIR SINE MIR -1 261 165 792 210 7 0 chr2 33810043 33810186 -216877668 + MER58B DNA MER1_type 198 341 0 3041 112 64 43 chr2 33810277 33810467 -216877387 + MER4D LTR ERV1 1 186 -593 2052 125 3 7 chr2 33810467 33810764 -216877090 + AluSp SINE Alu 1 296 -17 3041 112 64 43 chr2 33810764 33811342 -216876512 + MER4D LTR ERV1 186 779 0 249 304 0 0 chr2 33812042 33812098 -216875756 - MIR SINE MIR -192 70 15 1704 136 99 7 chr2 33812338 33812611 -216875243 - AluJb SINE Alu -12 300 3 903 139 0 0 chr2 33812615 33812752 -216875102 - L1PB4 LINE L1 -1 6155 6019 216 218 18 0 chr2 33812799 33812854 -216875000 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 203 276 195 11 chr2 33812970 33813057 -216874797 - L2 LINE L2 -2 3270 3168 546 28 83 0 chr2 33814196 33814268 -216873586 - MADE1 DNA Mariner -2 78 1 2128 116 0 0 chr2 33814642 33814926 -216872928 + AluSx SINE Alu 1 284 -28 638 66 66 0 chr2 33814926 33815078 -216872776 + (TA)n Simple_repeat Simple_repeat 1 162 0 2457 72 0 0 chr2 33815859 33816149 -216871705 - AluSg SINE Alu -20 290 1 2105 103 0 48 chr2 33816703 33817013 -216870841 - AluSx SINE Alu -17 295 1 230 259 34 13 chr2 33817345 33817586 -216870268 + CT-rich Low_complexity Low_complexity 1 246 0 2220 125 3 6 chr2 33818467 33818779 -216869075 - AluSx SINE Alu -1 311 1 919 129 15 0 chr2 33818780 33818912 -216868942 - AluSq/x SINE Alu -179 134 1 237 33 0 0 chr2 33818924 33818954 -216868900 + (T)n Simple_repeat Simple_repeat 1 30 0 304 298 10 0 chr2 33819194 33819247 -216868607 - MIR SINE MIR -79 129 78 2532 75 53 8 chr2 33819247 33819606 -216868248 + THE1C LTR MaLR 1 375 0 304 298 10 0 chr2 33819606 33819656 -216868198 - MIR SINE MIR -130 78 25 770 126 0 0 chr2 33820318 33820429 -216867425 - HY1 scRNA scRNA -1 111 1 398 296 85 0 chr2 33820539 33820715 -216867139 - MIR3 SINE MIR -3 205 15 212 235 0 47 chr2 33822019 33822104 -216865750 + C-rich Low_complexity Low_complexity 2 82 0 21 89 0 0 chr2 33822246 33822302 -216865552 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 33822599 33822620 -216865234 + (CCG)n Simple_repeat Simple_repeat 1 21 0 216 125 0 42 chr2 33822800 33822848 -216865006 + (CCCG)n Simple_repeat Simple_repeat 4 49 0 666 198 87 52 chr2 33825236 33825252 -216862602 + AluSg/x SINE Alu 120 134 -178 2251 103 13 7 chr2 33825252 33825552 -216862302 + AluSx SINE Alu 1 302 -10 666 198 87 52 chr2 33825552 33825707 -216862147 + AluSg/x SINE Alu 134 297 -15 373 272 40 39 chr2 33826496 33826689 -216861165 + MIR SINE MIR 2 191 -71 1749 163 2 101 chr2 33829247 33829671 -216858183 - MLT1B LTR MaLR -6 384 3 230 271 239 32 chr2 33829962 33830117 -216857737 - MER5A DNA MER1_type -2 187 1 23 54 0 0 chr2 33830457 33830494 -216857360 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr2 33830605 33830635 -216857219 + AT_rich Low_complexity Low_complexity 1 30 0 8847 117 41 6 chr2 33830873 33832208 -216855646 - Tigger1 DNA MER2_type 0 2418 1037 3932 137 32 2 chr2 33832206 33832797 -216855057 - Tigger1 DNA MER2_type -1809 609 1 * 335 316 22 61 chr2 33833049 33833280 -216854574 + MIR SINE MIR 2 223 -39 237 196 0 0 chr2 33834531 33834582 -216853272 + (TG)n Simple_repeat Simple_repeat 1 51 0 2240 121 0 0 chr2 33834598 33834903 -216852951 - AluSx SINE Alu -3 309 5 209 302 43 60 chr2 33835103 33835219 -216852635 + MIR SINE MIR 67 180 -82 204 182 0 73 chr2 33835276 33835331 -216852523 + L2 LINE L2 3171 3221 -92 303 28 0 0 chr2 33835385 33835421 -216852433 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 320 330 147 13 chr2 33835616 33835922 -216851932 - L2 LINE L2 -181 3132 2783 3954 87 4 8 chr2 33836387 33836903 -216850951 + THE1B-int LTR MaLR 1067 1580 0 331 89 0 0 chr2 33836903 33836948 -216850906 + THE1B LTR MaLR 1 45 -319 3411 127 12 14 chr2 33837212 33837724 -216850130 + MER9 LTR ERVK 1 511 0 1122 245 61 32 chr2 33838697 33839170 -216848684 + L1M4 LINE L1 3268 3754 -2392 1695 101 4 0 chr2 33839170 33839398 -216848456 + AluSq SINE Alu 1 229 -84 233 214 54 36 chr2 33839986 33840042 -216847812 - MER2 DNA MER2_type -3 342 286 486 0 0 0 chr2 33840077 33840131 -216847723 + (TA)n Simple_repeat Simple_repeat 1 54 0 3079 12 0 0 chr2 33841236 33841574 -216846280 - L1PA2 LINE L1 -376 5779 5442 2983 12 9 3 chr2 33841567 33841907 -216845947 + L1PA2 LINE L1 5794 6135 -20 * 1040 172 82 43 chr2 33842007 33842263 -216845591 - Tigger1 DNA MER2_type -2152 266 1 716 253 62 80 chr2 33842273 33842337 -216845517 - L1MC5 LINE L1 -204 7757 7693 2095 99 17 13 chr2 33842337 33842639 -216845215 + AluSx SINE Alu 2 304 -8 716 253 62 80 chr2 33842639 33842723 -216845131 - L1MC5 LINE L1 -268 7693 7609 2253 150 84 11 chr2 33842723 33843090 -216844764 + MSTD LTR MaLR 3 396 0 716 253 62 80 chr2 33843090 33843520 -216844334 - L1MC5 LINE L1 -352 7609 7246 1164 144 6 6 chr2 33845731 33845912 -216841942 - AluSq SINE Alu -12 301 121 12520 131 36 17 chr2 33846089 33846174 -216841680 + Tigger1 DNA MER2_type 387 469 -1949 2166 78 3 7 chr2 33846174 33846487 -216841367 - AluY SINE Alu 0 312 1 12520 131 36 17 chr2 33846487 33848393 -216839461 + Tigger1 DNA MER2_type 469 2418 0 10668 31 0 0 chr2 33850333 33851609 -216836245 - L1P LINE L1 -2228 3918 2643 * 11082 27 0 0 chr2 33851605 33852882 -216834972 + L1P LINE L1 3919 5195 -951 214 213 0 21 chr2 33853475 33853522 -216834332 + T-rich Low_complexity Low_complexity 4 49 0 626 275 23 18 chr2 33855092 33855263 -216832591 + MIR3 SINE MIR 30 201 -7 955 192 88 26 chr2 33856197 33856390 -216831464 - MER58A DNA MER1_type -3 221 17 288 0 0 0 chr2 33856499 33856531 -216831323 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 245 314 66 36 chr2 33856558 33856695 -216831159 - MIR3 SINE MIR -65 143 3 2875 7 0 0 chr2 33857653 33857962 -216829892 - AluY SINE Alu -2 309 1 30 0 0 0 chr2 33859444 33859474 -216828380 + AT_rich Low_complexity Low_complexity 1 30 0 2321 82 17 3 chr2 33859474 33859768 -216828086 - AluSq SINE Alu -15 298 1 405 223 96 0 chr2 33859828 33859922 -216827932 - L2 LINE L2 -2 3311 3209 717 130 73 0 chr2 33859946 33860069 -216827785 + L1MB2 LINE L1 5839 5970 -201 1611 165 8 0 chr2 33860187 33860453 -216827401 - L1M3 LINE L1 -437 5743 5476 3034 125 31 4 chr2 33860494 33860848 -216827006 - L1PB1 LINE L1 -2 6149 5779 495 0 0 0 chr2 33860848 33860903 -216826951 + (TG)n Simple_repeat Simple_repeat 2 56 0 3034 125 31 4 chr2 33860903 33861003 -216826851 - L1PB1 LINE L1 -372 5779 5683 3233 124 8 2 chr2 33861004 33861635 -216826219 + L1PB1 LINE L1 5053 5686 -465 984 116 30 50 chr2 33861630 33861829 -216826025 - L1M3 LINE L1 -689 5491 5297 * 385 263 147 39 chr2 33861899 33862055 -216825799 + MIR3 SINE MIR 31 203 -5 469 233 81 18 chr2 33862924 33863199 -216824655 + LTR33 LTR ERVL 154 520 -1 708 280 107 36 chr2 33863477 33863803 -216824051 - L1MC4a LINE L1 -1894 5914 5553 1873 157 0 0 chr2 33863803 33864104 -216823750 + AluSx SINE Alu 1 301 0 708 280 107 36 chr2 33864104 33864169 -216823685 - L1MC4a LINE L1 -2255 5553 5494 195 42 0 0 chr2 33864172 33864196 -216823658 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1198 118 0 24 chr2 33864220 33864390 -216823464 - AluSg SINE Alu -144 166 1 734 192 51 6 chr2 33864497 33864653 -216823201 - MER20 DNA MER1_type 0 219 57 21 0 0 0 chr2 33864799 33864820 -216823034 + AT_rich Low_complexity Low_complexity 1 21 0 655 248 38 17 chr2 33865052 33865288 -216822566 - MIR SINE MIR 0 262 22 345 145 65 0 chr2 33865518 33865580 -216822274 + MIR SINE MIR 126 191 -71 555 228 83 21 chr2 33866477 33866622 -216821232 - MIR3 SINE MIR -21 187 34 2166 121 20 3 chr2 33866883 33867189 -216820665 + AluSq SINE Alu 1 311 -2 260 267 0 0 chr2 33868815 33868875 -216818979 - MIR SINE MIR -12 250 191 22 56 0 0 chr2 33869054 33869090 -216818764 + AT_rich Low_complexity Low_complexity 1 36 0 2274 108 0 3 chr2 33869184 33869479 -216818375 + AluSx SINE Alu 1 294 -18 236 370 22 29 chr2 33870004 33870142 -216817712 + MIR SINE MIR 120 256 -6 2296 215 63 47 chr2 33870565 33870607 -216817247 - MLT1F1 LTR MaLR 0 567 527 2339 82 3 0 chr2 33870607 33870901 -216816953 + AluSg SINE Alu 1 295 -15 2296 215 63 47 chr2 33870901 33871293 -216816561 - MLT1F1 LTR MaLR -40 527 120 823 180 8 0 chr2 33871293 33871421 -216816433 - FLAM_C SINE Alu -2 131 3 2296 215 63 47 chr2 33871421 33871543 -216816311 - MLT1F1 LTR MaLR -447 120 1 22 35 0 0 chr2 33876766 33876795 -216811059 + AT_rich Low_complexity Low_complexity 1 29 0 726 182 29 53 chr2 33877460 33877630 -216810224 + MER58B DNA MER1_type 173 338 -3 978 245 94 18 chr2 33877928 33878214 -216809640 + L3 LINE CR1 1257 1564 -13 845 209 0 0 chr2 33878682 33878821 -216809033 - MER58A DNA MER1_type 0 139 1 203 265 147 59 chr2 33878821 33878957 -216808897 - MIR3 SINE MIR -13 195 48 9883 22 5 1 chr2 33879300 33881158 -216806696 + L1PA3 LINE L1 4292 6152 -3 21 57 0 0 chr2 33881158 33881193 -216806661 + AT_rich Low_complexity Low_complexity 1 35 0 2279 85 3 0 chr2 33881223 33881517 -216806337 - AluY SINE Alu -16 295 1 21 0 0 0 chr2 33881526 33881547 -216806307 + AT_rich Low_complexity Low_complexity 1 21 0 828 282 45 20 chr2 33881901 33882146 -216805708 - MIR SINE MIR -4 258 8 219 224 164 0 chr2 33882203 33882270 -216805584 + L2 LINE L2 3188 3265 -7 255 251 90 90 chr2 33882272 33882360 -216805494 + L1ME LINE L1 5652 5742 -379 1948 146 0 56 chr2 33882360 33882683 -216805171 + AluSx SINE Alu 1 305 -7 255 251 90 90 chr2 33882683 33882761 -216805093 + L1ME LINE L1 5741 5818 -303 206 342 0 13 chr2 33883019 33883098 -216804756 - MIR3 SINE MIR -16 192 115 887 165 0 0 chr2 33883900 33884033 -216803821 - FLAM_C SINE Alu 0 133 1 1477 125 60 0 chr2 33884084 33884300 -216803554 - MER30 DNA MER1_type 0 230 2 397 353 55 5 chr2 33884935 33885153 -216802701 + L2 LINE L2 2837 3065 -248 1890 149 7 13 chr2 33885447 33885748 -216802106 - AluSx SINE Alu -13 299 1 2438 80 0 0 chr2 33887372 33887672 -216800182 + AluY SINE Alu 1 300 -11 336 24 0 0 chr2 33887679 33887691 -216800163 + (CA)n Simple_repeat Simple_repeat 1 53 0 336 24 0 0 chr2 33887691 33887732 -216800122 + (CA)n Simple_repeat Simple_repeat 2 42 0 1264 180 144 8 chr2 33887809 33888204 -216799650 - Tigger6 DNA MER2_type -72 1525 1077 * 2335 184 5 2 chr2 33888201 33888636 -216799218 - Tigger6 DNA MER2_type -1161 436 1 195 102 41 102 chr2 33888787 33888836 -216799018 + L2 LINE L2 2448 2493 -821 192 383 90 31 chr2 33888987 33889475 -216798379 + L2 LINE L2 2458 2974 -340 361 324 64 73 chr2 33889800 33890208 -216797646 - L2 LINE L2 -42 3230 2827 594 312 205 29 chr2 33890321 33890975 -216796879 - L2 LINE L2 -916 2398 1630 737 59 29 0 chr2 33891252 33891354 -216796500 - L1MA2 LINE L1 0 6304 6200 242 333 0 0 chr2 33891355 33891412 -216796442 - L2 LINE L2 -12 3301 3245 224 295 48 57 chr2 33892342 33892447 -216795407 - L2 LINE L2 -37 3235 3132 268 265 193 0 chr2 33892491 33892574 -216795280 + MIR3 SINE MIR 99 197 -11 2361 84 0 19 chr2 33893130 33893439 -216794415 + AluSq SINE Alu 1 303 -10 1890 135 11 0 chr2 33893875 33894157 -216793697 - AluSx SINE Alu -27 285 1 368 359 38 5 chr2 33894992 33895176 -216792678 + MIR SINE MIR 30 219 -43 2041 120 3 32 chr2 33895228 33895544 -216792310 - AluSg1 SINE Alu -2 307 1 23 0 0 0 chr2 33895687 33895710 -216792144 + AT_rich Low_complexity Low_complexity 1 23 0 1696 160 10 14 chr2 33896967 33897260 -216790594 - AluJb SINE Alu -20 292 1 372 231 22 22 chr2 33897458 33897592 -216790262 + L1MA4A LINE L1 5989 6122 -181 371 239 11 0 chr2 33897595 33897687 -216790167 + L1MA4A LINE L1 6188 6280 -23 2510 84 0 3 chr2 33898050 33898361 -216789493 + AluSg SINE Alu 1 310 0 221 329 88 52 chr2 33899091 33899398 -216788456 - L2 LINE L2 -554 2760 2443 418 337 73 11 chr2 33899429 33899607 -216788247 - MIR3 SINE MIR -2 206 18 306 307 8 63 chr2 33901358 33901485 -216786369 - L2 LINE L2 -14 3299 3180 1873 142 3 63 chr2 33902078 33902410 -216785444 + AluJo SINE Alu 1 312 0 32021 35 2 3 chr2 33903994 33908071 -216779783 + L1PA3 LINE L1 1 4076 -2070 4844 31 0 2 chr2 33908171 33908747 -216779107 + L1PA3 LINE L1 5581 6155 0 351 0 0 0 chr2 33909128 33909167 -216778687 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 33911340 33911363 -216776491 + AT_rich Low_complexity Low_complexity 1 23 0 241 290 87 22 chr2 33911461 33911599 -216776255 + MARNA DNA Mariner 354 500 -86 1116 162 0 12 chr2 33911676 33911849 -216776005 - FRAM SINE Alu -5 171 1 266 299 28 28 chr2 33912036 33912143 -216775711 + MIR3 SINE MIR 92 198 -10 24 0 0 0 chr2 33912386 33912410 -216775444 + AT_rich Low_complexity Low_complexity 1 24 0 1094 245 45 48 chr2 33912799 33913174 -216774680 + MLT1B LTR MaLR 1 374 -16 2475 66 3 0 chr2 33913564 33913866 -216773988 + AluY SINE Alu 1 303 -8 218 386 95 16 chr2 33915795 33915970 -216771884 - MIR3 SINE MIR -3 205 13 2386 72 0 16 chr2 33915970 33916277 -216771577 - AluSx SINE Alu -10 302 1 218 386 95 16 chr2 33916277 33916290 -216771564 - MIR3 SINE MIR -195 13 2 309 360 47 0 chr2 33916961 33917111 -216770743 - MIR SINE MIR -53 209 53 23 33 0 0 chr2 33918139 33918169 -216769685 + AT_rich Low_complexity Low_complexity 1 30 0 371 308 103 14 chr2 33918392 33918538 -216769316 + MER91A DNA MER1_type 22 180 -16 321 292 84 26 chr2 33918565 33918719 -216769135 - MIR3 SINE MIR -45 163 1 180 229 115 16 chr2 33918852 33918913 -216768941 - L3 LINE CR1 -77 1500 1434 235 311 250 22 chr2 33919623 33919827 -216768027 - L3 LINE CR1 -6 1571 1415 1170 204 22 0 chr2 33919827 33920058 -216767796 + MER46A DNA MER2_type 1 236 0 235 311 250 22 chr2 33920058 33920213 -216767641 - L3 LINE CR1 -162 1415 1130 186 43 0 0 chr2 33922244 33922267 -216765587 + (TAA)n Simple_repeat Simple_repeat 3 25 0 254 362 190 9 chr2 33922270 33922491 -216765363 - MIR SINE MIR 0 262 2 2293 88 10 3 chr2 33922810 33923116 -216764738 - AluSc SINE Alu -1 308 1 2243 114 0 0 chr2 33925503 33925800 -216762054 - AluSq SINE Alu -16 297 1 197 286 0 20 chr2 33926532 33926581 -216761273 + MIR SINE MIR 32 79 -183 232 277 130 57 chr2 33928278 33928455 -216759399 - MIR SINE MIR -20 242 53 362 250 125 8 chr2 33928707 33928827 -216759027 + MER94 DNA DNA 1 134 0 375 320 125 0 chr2 33929811 33929939 -216757915 - MIR3 SINE MIR -33 175 32 285 289 280 18 chr2 33930759 33930977 -216756877 + L3 LINE CR1 978 1252 -325 450 376 9 19 chr2 33931156 33931369 -216756485 - L3 LINE CR1 0 1577 1367 451 273 125 31 chr2 33931607 33932032 -216755822 - L1MEd LINE L1 -2567 3815 3351 3141 119 80 16 chr2 33932226 33932437 -216755417 - L1MA5A LINE L1 0 6297 6101 2074 125 57 20 chr2 33932437 33932788 -216755066 - THE1B LTR MaLR 0 364 1 3141 119 80 16 chr2 33932788 33933139 -216754715 - L1MA5A LINE L1 -196 6101 5699 302 194 21 21 chr2 33933161 33933254 -216754600 - L1MEd LINE L1 -3235 3147 3055 338 210 21 61 chr2 33933292 33933450 -216754404 - L1MEd LINE L1 -3882 2500 2376 787 217 82 98 chr2 33933457 33933950 -216753904 - MER66A LTR ERV1 -12 487 100 1932 143 34 0 chr2 33934134 33934427 -216753427 - AluSx SINE Alu -9 303 1 2356 85 7 7 chr2 33934900 33935205 -216752649 - AluSc SINE Alu -4 305 1 570 290 48 35 chr2 33935375 33935606 -216752248 - MIR SINE MIR -26 236 3 554 260 136 6 chr2 33935618 33935795 -216752059 - MIR SINE MIR -6 256 57 2274 113 0 3 chr2 33935801 33936102 -216751752 - AluSc SINE Alu -9 300 1 1946 147 3 17 chr2 33936291 33936590 -216751264 + AluJo SINE Alu 1 295 -17 211 211 0 0 chr2 33936590 33936628 -216751226 + GA-rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 33936668 33936691 -216751163 + AT_rich Low_complexity Low_complexity 1 23 0 2078 169 8 72 chr2 33938981 33939478 -216748376 - MER31B LTR ERV1 0 466 2 413 161 22 3 chr2 33939714 33939853 -216748001 - MER53 DNA DNA -3 186 8 274 262 132 16 chr2 33939910 33940256 -216747598 - L1MEd LINE L1 -4730 1833 1290 480 311 67 18 chr2 33940288 33940513 -216747341 - L1MEd LINE L1 -5020 1352 1117 221 186 51 0 chr2 33940918 33940977 -216746877 + (TTTA)n Simple_repeat Simple_repeat 4 65 0 189 74 0 0 chr2 33941058 33941085 -216746769 + (TG)n Simple_repeat Simple_repeat 2 28 0 231 122 0 41 chr2 33941154 33941203 -216746651 - L1ME LINE L1 -248 5916 5870 301 119 0 0 chr2 33941466 33941508 -216746346 - 5S rRNA rRNA -79 42 1 3118 69 2 0 chr2 33941508 33941945 -216745909 + L1PA7 LINE L1 4323 4760 -1386 7234 46 3 4 chr2 33941948 33943165 -216744689 + L1PA7 LINE L1 4936 6151 -3 372 235 66 7 chr2 33944559 33944695 -216743159 - Charlie2a DNA MER1_type 0 2862 2719 * 485 219 55 7 chr2 33944693 33944839 -216743015 - Charlie2a DNA MER1_type -1189 1673 1521 628 278 36 46 chr2 33944863 33945165 -216742689 - Charlie2a DNA MER1_type -2546 316 18 445 331 26 0 chr2 33945660 33945811 -216742043 - MIR3 SINE MIR -9 199 45 249 136 0 0 chr2 33946177 33946221 -216741633 + MER116 DNA Mariner 1 44 -36 1921 118 0 51 chr2 33946757 33947089 -216740765 + AluSx SINE Alu 1 317 0 528 229 13 51 chr2 33947745 33947793 -216740061 + L1ME3 LINE L1 5996 6044 -118 2623 52 0 0 chr2 33947793 33948100 -216739754 - AluY SINE Alu -4 307 1 528 229 13 51 chr2 33948100 33948208 -216739646 + L1ME3 LINE L1 6044 6146 -16 191 285 93 65 chr2 33950091 33950414 -216737440 + L2 LINE L2 2155 2486 -828 364 300 109 9 chr2 33951152 33951262 -216736592 + L2 LINE L2 3189 3309 -4 339 208 188 0 chr2 33952418 33952514 -216735340 - FLAM_A SINE Alu -7 126 13 258 32 0 0 chr2 33952633 33952664 -216735190 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 2176 127 0 3 chr2 33952664 33952952 -216734902 - AluSp SINE Alu -24 289 1 321 68 0 0 chr2 33954236 33954280 -216733574 + (CA)n Simple_repeat Simple_repeat 1 44 0 360 308 101 13 chr2 33955039 33955198 -216732656 - MIR SINE MIR -69 193 21 1104 203 33 0 chr2 33955202 33955414 -216732440 + MER58A DNA MER1_type 1 219 -5 691 204 188 6 chr2 33955427 33955603 -216732251 + MER3 DNA MER1_type 2 209 0 831 310 16 4 chr2 33955966 33956211 -216731643 - MIR SINE MIR 0 262 15 2452 80 0 0 chr2 33956359 33956659 -216731195 - AluSx SINE Alu -12 300 1 565 55 44 22 chr2 33957005 33957096 -216730758 - MER85 DNA T2_type 0 139 47 396 0 0 0 chr2 33957096 33957140 -216730714 + (CA)n Simple_repeat Simple_repeat 1 44 0 2623 129 2 19 chr2 33958102 33958528 -216729326 + L1M2 LINE L1 2 420 -6429 3365 163 47 2 chr2 33958531 33959131 -216728723 + L1M2 LINE L1 970 1596 -5253 2394 61 3 23 chr2 33959148 33959458 -216728396 + AluY SINE Alu 1 304 -7 214 301 60 48 chr2 33959636 33959719 -216728135 + L2 LINE L2 3189 3272 -41 2121 75 39 14 chr2 33961652 33961931 -216725923 - AluY SINE Alu -4 307 22 27 0 0 0 chr2 33962068 33962095 -216725759 + AT_rich Low_complexity Low_complexity 1 27 0 189 0 0 0 chr2 33962320 33962341 -216725513 + (T)n Simple_repeat Simple_repeat 1 21 0 916 186 9 23 chr2 33962371 33962591 -216725263 - L1PA5 LINE L1 -2 6152 5936 1074 15 8 0 chr2 33963067 33963199 -216724655 + L1P1 LINE L1 5647 5779 -376 524 192 10 20 chr2 33964409 33964508 -216723346 - MER2 DNA MER2_type -246 99 2 446 193 23 0 chr2 33965131 33965219 -216722635 - MER20 DNA MER1_type 0 219 130 358 306 45 22 chr2 33965493 33965627 -216722227 - MIR3 SINE MIR -15 193 57 404 319 15 7 chr2 33967282 33967417 -216720437 - L2 LINE L2 0 3313 3178 186 43 0 0 chr2 33970075 33970098 -216717756 + (T)n Simple_repeat Simple_repeat 1 23 0 2412 83 0 3 chr2 33971209 33971510 -216716344 + AluSc SINE Alu 1 300 -9 2371 102 0 3 chr2 33971511 33971815 -216716039 + AluY SINE Alu 1 303 -8 816 295 115 28 chr2 33972045 33972305 -216715549 + L1ME4a LINE L1 5258 5494 -627 2398 178 73 24 chr2 33972305 33972800 -216715054 - MLT2B1 LTR ERVL -1 519 1 816 295 115 28 chr2 33972800 33973332 -216714522 + L1ME4a LINE L1 5494 6119 -2 6283 173 118 36 chr2 33973534 33974955 -216712899 + MER52A LTR ERV1 219 1755 0 306 0 0 0 chr2 33976630 33976664 -216711190 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 254 136 0 0 chr2 33977494 33977538 -216710316 - AluSq SINE Alu -2 299 256 1410 105 14 29 chr2 33977538 33977748 -216710106 - AluSq SINE Alu -106 207 1 2427 64 0 3 chr2 33977848 33978143 -216709711 + AluY SINE Alu 13 306 -5 664 275 70 18 chr2 33980038 33980300 -216707554 - MIR SINE MIR 0 262 4 477 302 34 42 chr2 33982059 33982356 -216705498 - L3 LINE CR1 -3 1574 1230 2335 84 7 0 chr2 33982920 33983216 -216704638 + AluSp SINE Alu 1 298 -15 1971 153 0 0 chr2 33984082 33984364 -216703490 + AluSx SINE Alu 1 282 -30 213 39 0 0 chr2 33984367 33984393 -216703461 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 200 320 111 23 chr2 33984930 33985102 -216702752 + MIR SINE MIR 70 256 -6 2423 74 7 10 chr2 33985263 33985645 -216702209 - AluY SINE Alu 0 381 1 1730 161 13 13 chr2 33988300 33988599 -216699255 + AluJo SINE Alu 1 299 -13 381 304 145 50 chr2 33988610 33989075 -216698779 - L2 LINE L2 -32 3240 2736 261 83 0 0 chr2 33989568 33989604 -216698250 + (TA)n Simple_repeat Simple_repeat 1 36 0 356 217 60 12 chr2 33990214 33990297 -216697557 - L2 LINE L2 0 3313 3227 2452 69 0 0 chr2 33990297 33990586 -216697268 + AluSc SINE Alu 1 289 -20 790 188 0 36 chr2 33990761 33990899 -216696955 - FLAM_A SINE Alu 0 133 1 1907 234 107 48 chr2 33991375 33992322 -216695532 + L1ME3A LINE L1 2559 3561 -2585 271 296 79 46 chr2 33992332 33992484 -216695370 + MLT1J LTR MaLR 295 451 -60 3270 279 54 16 chr2 33992485 33993788 -216694066 + L1ME3A LINE L1 3840 5191 -955 2110 263 80 21 chr2 33993841 33994400 -216693454 + L1ME3A LINE L1 5352 5967 -203 2163 123 31 47 chr2 33994400 33994781 -216693073 + THE1C LTR MaLR 1 375 0 2110 263 80 21 chr2 33994781 33994969 -216692885 + L1ME3A LINE L1 5967 6143 -27 2125 113 7 3 chr2 33994969 33995294 -216692560 - AluSg SINE Alu 0 310 1 1755 130 47 18 chr2 33996202 33996510 -216691344 + AluSg SINE Alu 1 316 0 2206 102 0 20 chr2 33998150 33998455 -216689399 + AluSc SINE Alu 1 299 -10 1273 164 86 112 chr2 33998640 33998745 -216689109 - MER44D DNA MER2_type -1882 609 503 267 31 0 0 chr2 33998745 33998777 -216689077 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1273 164 86 112 chr2 33998777 33999019 -216688835 - MER44D DNA MER2_type -1988 503 1 449 277 196 18 chr2 33999055 33999275 -216688579 - MIR SINE MIR 0 262 4 244 209 0 0 chr2 33999467 33999510 -216688344 + Tigger5 DNA MER2_type 1 43 -2280 1478 160 95 90 chr2 33999702 33999799 -216688055 + L1MB4 LINE L1 5767 5862 -318 2199 99 0 63 chr2 33999799 34000132 -216687722 + AluSx SINE Alu 1 312 0 1478 160 95 90 chr2 34000132 34000446 -216687408 + L1MB4 LINE L1 5862 6180 0 697 191 37 133 chr2 34001511 34001588 -216686266 - MER20 DNA MER1_type 0 219 136 2622 44 0 19 chr2 34001588 34001905 -216685949 - AluY SINE Alu 0 311 1 697 191 37 133 chr2 34001905 34002068 -216685786 - MER20 DNA MER1_type -83 136 2 359 283 145 6 chr2 34003386 34003545 -216684309 + MER5A DNA MER1_type 9 189 0 254 326 30 55 chr2 34003556 34003734 -216684120 - MER5B DNA MER1_type -3 186 1 2194 132 140 31 chr2 34003906 34004292 -216683562 + MSTA LTR MaLR 1 428 0 185 375 31 10 chr2 34006903 34006999 -216680855 - MIR SINE MIR -67 141 44 319 305 78 14 chr2 34007452 34007593 -216680261 - L2 LINE L2 -4 3309 3160 2169 77 0 24 chr2 34008480 34008778 -216679076 + AluY SINE Alu 1 291 -20 318 218 34 88 chr2 34009141 34009288 -216678566 + L2 LINE L2 3001 3139 -174 1850 103 7 18 chr2 34009784 34010065 -216677789 - AluY SINE Alu -33 278 1 2541 64 0 10 chr2 34011563 34011575 -216676279 - AluY SINE Alu -1 310 299 225 65 0 0 chr2 34011575 34011606 -216676248 + (TA)n Simple_repeat Simple_repeat 2 32 0 2541 64 0 10 chr2 34011606 34011906 -216675948 - AluY SINE Alu -12 299 1 216 235 20 0 chr2 34012404 34012455 -216675399 + L2 LINE L2 1765 1816 -1498 262 309 36 0 chr2 34012506 34012590 -216675264 + MIR SINE MIR 146 232 -30 216 0 0 0 chr2 34012954 34012978 -216674876 + (TG)n Simple_repeat Simple_repeat 2 25 0 292 311 108 7 chr2 34013907 34014055 -216673799 + MIR SINE MIR 20 182 -80 280 267 57 80 chr2 34014489 34014665 -216673189 + MER104 DNA Tc2 4 175 -5 2053 173 11 11 chr2 34014679 34015044 -216672810 - L1PB4 LINE L1 0 6156 5792 237 189 54 27 chr2 34015174 34015248 -216672606 + L1MC/D LINE L1 5741 5816 -1992 2176 80 31 7 chr2 34015260 34015548 -216672306 + AluY SINE Alu 1 295 -16 764 65 74 9 chr2 34015560 34015668 -216672186 + L1P5 LINE L1 5545 5659 -497 900 141 0 0 chr2 34015670 34015805 -216672049 - L1PB4 LINE L1 -383 5773 5639 1886 157 0 0 chr2 34015927 34016220 -216671634 + AluJb SINE Alu 6 298 -14 1398 232 304 8 chr2 34016607 34017206 -216670648 - LTR50 LTR ERVL -2 793 18 809 261 141 70 chr2 34017588 34018106 -216669748 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34018881 34019182 -216668672 + AluSx SINE Alu 1 301 -11 2092 171 49 0 chr2 34019745 34020091 -216667763 + MLT1A1 LTR MaLR 3 365 0 2267 62 10 40 chr2 34020130 34020434 -216667420 + AluY SINE Alu 1 295 -16 1587 231 52 30 chr2 34020781 34021222 -216666632 - MLT1C LTR MaLR -12 455 5 327 294 96 7 chr2 34021763 34021899 -216665955 + MIR SINE MIR 87 234 -28 2343 97 0 3 chr2 34022021 34022329 -216665525 - AluSq SINE Alu -4 309 3 2287 104 3 0 chr2 34022427 34022735 -216665119 - AluSg SINE Alu -1 309 1 608 124 11 0 chr2 34022787 34022876 -216664978 - 5S rRNA rRNA -31 90 1 3619 38 0 5 chr2 34023661 34024081 -216663773 + L1PA4 LINE L1 5735 6152 -3 243 0 0 0 chr2 34024085 34024112 -216663742 + (CAA)n Simple_repeat Simple_repeat 2 28 0 239 367 163 0 chr2 34024206 34024353 -216663501 - MIR SINE MIR -71 191 21 249 353 34 78 chr2 34025405 34025562 -216662292 + L3 LINE CR1 51 199 -1378 2370 81 10 3 chr2 34025562 34025869 -216661985 + AluY SINE Alu 1 309 -2 249 353 34 78 chr2 34025869 34025915 -216661939 + L3 LINE CR1 199 245 -1332 544 161 35 0 chr2 34026183 34026270 -216661584 + 5S rRNA rRNA 1 90 -31 180 352 0 0 chr2 34026333 34026404 -216661450 - L2 LINE L2 -525 2789 2719 240 239 33 103 chr2 34026405 34026589 -216661265 + MER104 DNA Tc2 1 171 -9 1629 324 88 21 chr2 34026636 34027543 -216660311 - L2 LINE L2 -627 2687 1720 402 314 154 33 chr2 34027611 34027910 -216659944 - L2 LINE L2 -556 2758 2424 1510 139 12 148 chr2 34028074 34028411 -216659443 + AluJb SINE Alu 1 291 -11 558 251 6 9 chr2 34029654 34029794 -216658060 + MIR3 SINE MIR 32 175 -33 2384 78 3 0 chr2 34032934 34033227 -216654627 - AluSp SINE Alu -19 294 1 1617 70 0 5 chr2 34033362 34033563 -216654291 + AluY SINE Alu 105 304 -7 195 42 0 0 chr2 34033948 34033972 -216653882 + (GGA)n Simple_repeat Simple_repeat 2 25 0 858 140 140 35 chr2 34034744 34034915 -216652939 - AluSg/x SINE Alu -16 296 108 572 279 135 5 chr2 34035145 34035353 -216652501 + MIR SINE MIR 9 243 -19 309 267 99 38 chr2 34035533 34035664 -216652190 - MER5A DNA MER1_type 0 189 51 189 0 0 0 chr2 34035666 34035687 -216652167 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1265 143 135 8 chr2 34036950 34037187 -216650667 + Tigger7 DNA MER2_type 1 267 -2220 570 157 11 0 chr2 34037192 34037281 -216650573 + Tigger7 DNA MER2_type 2397 2486 -1 377 290 73 0 chr2 34037284 34037408 -216650446 - MIR SINE MIR -117 145 13 1958 134 36 0 chr2 34037773 34038049 -216649805 + AluSx SINE Alu 3 288 -24 224 129 0 0 chr2 34038926 34038957 -216648897 - L2 LINE L2 -18 3295 3265 2140 115 10 0 chr2 34039852 34040148 -216647706 + AluSx SINE Alu 1 299 -13 2248 47 0 50 chr2 34040698 34041021 -216646833 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34042275 34042296 -216645558 + AT_rich Low_complexity Low_complexity 1 21 0 1360 136 182 25 chr2 34042877 34043201 -216644653 - THE1C LTR MaLR 0 375 1 351 0 0 0 chr2 34043362 34043401 -216644453 + (TG)n Simple_repeat Simple_repeat 2 40 0 2088 120 0 19 chr2 34043401 34043709 -216644145 - AluSx SINE Alu -9 303 2 246 75 0 25 chr2 34044337 34044377 -216643477 + MADE1 DNA Mariner 2 40 -40 2355 106 0 3 chr2 34044377 34044689 -216643165 - AluY SINE Alu 0 311 1 2196 110 3 3 chr2 34045474 34045773 -216642081 + AluSx SINE Alu 1 299 -13 803 158 0 96 chr2 34046663 34046872 -216640982 - MER53 DNA DNA 0 189 1 547 276 58 11 chr2 34047419 34047617 -216640237 - MIR SINE MIR 0 262 52 477 241 50 87 chr2 34047950 34048083 -216639771 - L1MA9 LINE L1 -123 6189 6053 1870 162 7 3 chr2 34048083 34048385 -216639469 - AluJb SINE Alu -9 303 1 477 241 50 87 chr2 34048385 34048550 -216639304 - L1MA9 LINE L1 -259 6053 5902 520 196 147 85 chr2 34049065 34049361 -216638493 + L1ME4a LINE L1 5711 6038 -83 1629 93 0 0 chr2 34049361 34049566 -216638288 + AluSg/x SINE Alu 85 289 -21 520 196 147 85 chr2 34049566 34049656 -216638198 + L1ME4a LINE L1 6038 6121 0 614 389 29 3 chr2 34049978 34050284 -216637570 + L3 LINE CR1 229 542 -1035 1511 186 42 45 chr2 34050420 34050732 -216637122 - AluJo SINE Alu -1 311 1 1379 209 138 20 chr2 34050985 34051392 -216636462 - MSTB2 LTR MaLR -2 455 1 477 293 176 55 chr2 34051507 34051978 -216635876 - L2 LINE L2 -547 2767 2240 590 267 128 15 chr2 34053447 34053642 -216634212 + MIR SINE MIR 46 262 0 560 81 35 0 chr2 34054631 34054718 -216633136 + L1MB8 LINE L1 6077 6166 -12 260 237 29 65 chr2 34054850 34054989 -216632865 - L1ME4a LINE L1 -215 5906 5773 1350 117 0 0 chr2 34055063 34055242 -216632612 - AluSg/x SINE Alu -2 310 132 210 37 0 0 chr2 34055242 34055269 -216632585 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1940 129 11 3 chr2 34055275 34055562 -216632292 - AluSx SINE Alu -23 289 1 2400 97 0 0 chr2 34055641 34055941 -216631913 - AluSg SINE Alu -9 301 2 394 130 0 98 chr2 34055971 34056063 -216631791 - L1MA5A LINE L1 0 6297 6215 21 0 0 0 chr2 34056098 34056119 -216631735 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr2 34056177 34056232 -216631622 + AT_rich Low_complexity Low_complexity 1 55 0 1874 110 0 4 chr2 34056340 34056586 -216631268 + AluSx SINE Alu 32 276 -36 219 69 0 0 chr2 34056599 34056628 -216631226 + (TAA)n Simple_repeat Simple_repeat 2 30 0 252 364 45 0 chr2 34057527 34057615 -216630239 + MIR3 SINE MIR 65 156 -52 486 258 26 53 chr2 34057823 34057974 -216629880 + MIR SINE MIR 54 200 -62 420 289 107 13 chr2 34058077 34058236 -216629618 - L2 LINE L2 -185 3087 2914 294 282 35 0 chr2 34058345 34058430 -216629424 - MIR SINE MIR -62 200 113 2038 113 22 0 chr2 34058465 34058789 -216629065 - AluSg SINE Alu 0 330 1 230 0 0 32 chr2 34058798 34058829 -216629025 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1275 182 91 3 chr2 34058829 34059125 -216628729 - L1MD3 LINE L1 -170 7825 7504 1903 75 120 0 chr2 34060059 34060325 -216627529 + AluSc SINE Alu 1 298 -1 215 268 0 0 chr2 34060558 34060614 -216627240 - MIR SINE MIR -50 212 157 298 252 75 101 chr2 34062731 34062890 -216624964 - MIR3 SINE MIR -7 201 47 240 188 58 14 chr2 34063663 34063732 -216624122 + L1ME LINE L1 5532 5603 -518 1019 111 12 25 chr2 34063975 34064137 -216623717 + AluSx SINE Alu 1 160 -152 471 48 0 0 chr2 34064145 34064207 -216623647 + (CA)n Simple_repeat Simple_repeat 2 63 0 2180 104 3 53 chr2 34064415 34064542 -216623312 - MER1B DNA MER1_type -2373 337 205 2430 73 3 3 chr2 34064542 34064844 -216623010 - AluY SINE Alu -9 302 1 2180 104 3 53 chr2 34064844 34065071 -216622783 - MER1B DNA MER1_type -2505 205 1 701 246 67 88 chr2 34066097 34066226 -216621628 - L2 LINE L2 -14 3299 3169 1987 118 0 44 chr2 34066226 34066522 -216621332 + AluSc SINE Alu 1 283 -26 701 246 67 88 chr2 34066522 34066677 -216621177 - L2 LINE L2 -144 3169 3021 1035 245 107 15 chr2 34066783 34067159 -216620695 - L2 LINE L2 -983 2331 1863 2331 97 0 0 chr2 34067482 34067782 -216620072 + AluSx SINE Alu 1 300 -12 2346 78 3 0 chr2 34068002 34068295 -216619559 + AluSc SINE Alu 1 294 -15 1394 222 37 22 chr2 34068351 34068882 -216618972 + L1ME1 LINE L1 5505 6161 -5 21 57 0 0 chr2 34069532 34069567 -216618287 + AT_rich Low_complexity Low_complexity 1 35 0 2260 108 7 0 chr2 34070195 34070492 -216617362 + AluSx SINE Alu 1 299 -13 2065 115 3 7 chr2 34071145 34071441 -216616413 - AluSg SINE Alu -15 295 1 426 300 127 34 chr2 34071603 34071840 -216616014 - MIR SINE MIR 0 262 4 1519 182 11 7 chr2 34075463 34075749 -216612105 + AluJo SINE Alu 1 287 -25 220 333 178 67 chr2 34075827 34076007 -216611847 - L2 LINE L2 0 3272 3073 365 169 39 0 chr2 34076085 34076162 -216611692 - MER116 DNA Mariner 0 80 1 1908 138 31 3 chr2 34076859 34077150 -216610704 + AluSq SINE Alu 1 299 -14 1241 166 4 53 chr2 34079159 34079406 -216608448 + MER46A DNA MER2_type 2 236 0 272 312 193 0 chr2 34079543 34079652 -216608202 - L2 LINE L2 0 3313 3184 1307 136 14 47 chr2 34080094 34080308 -216607546 + AluJo SINE Alu 87 293 -19 2385 94 0 0 chr2 34080311 34080610 -216607244 + AluSq SINE Alu 1 299 -14 429 291 151 48 chr2 34081127 34081281 -216606573 - L2 LINE L2 0 3313 3176 1977 129 9 55 chr2 34081281 34081607 -216606247 + AluSx SINE Alu 1 311 -1 429 291 151 48 chr2 34081607 34081703 -216606151 - L2 LINE L2 -137 3176 3037 667 197 94 60 chr2 34081899 34082132 -216605722 + L1MC1 LINE L1 6093 6333 0 407 213 37 28 chr2 34083769 34083877 -216603977 - MIR SINE MIR -4 258 150 1662 113 94 50 chr2 34084231 34084550 -216603304 - MER47A DNA MER2_type 0 366 34 726 142 9 0 chr2 34084551 34084664 -216603190 + AluSq/x SINE Alu 3 116 -197 22 35 0 0 chr2 34085237 34085266 -216602588 + AT_rich Low_complexity Low_complexity 1 29 0 1762 169 3 29 chr2 34085688 34085996 -216601858 + AluJo SINE Alu 1 300 -12 359 309 92 94 chr2 34086939 34087395 -216600459 + L2 LINE L2 2809 3263 -9 194 262 71 71 chr2 34087624 34087708 -216600146 - L2 LINE L2 0 3272 3189 376 305 67 70 chr2 34087710 34087995 -216599859 + L2 LINE L2 2985 3268 -4 2305 101 0 3 chr2 34088969 34089267 -216598587 + AluSx SINE Alu 1 297 -15 2499 59 0 7 chr2 34089402 34089709 -216598145 + AluY SINE Alu 1 305 -6 208 219 0 0 chr2 34090270 34090311 -216597543 + L3 LINE CR1 1523 1563 -14 1890 121 38 0 chr2 34091737 34092026 -216595828 + AluSx SINE Alu 1 300 -12 515 280 89 52 chr2 34092863 34093134 -216594720 + L3 LINE CR1 1294 1574 -3 22 0 0 0 chr2 34093547 34093569 -216594285 + AT_rich Low_complexity Low_complexity 1 22 0 447 297 7 71 chr2 34093777 34093932 -216593922 - MIR3 SINE MIR -28 180 36 603 343 99 33 chr2 34094240 34094689 -216593165 + L2 LINE L2 1924 2342 -972 189 0 0 0 chr2 34094689 34094710 -216593144 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2264 100 0 0 chr2 34094713 34094994 -216592860 - AluSg SINE Alu -25 285 5 603 343 99 33 chr2 34094994 34095277 -216592577 + L2 LINE L2 2343 2709 -605 2104 146 0 0 chr2 34095535 34095844 -216592010 - AluSx SINE Alu 0 312 4 216 310 69 0 chr2 34096036 34096094 -216591760 + L2 LINE L2 3207 3268 -4 23 54 0 0 chr2 34096163 34096200 -216591654 + AT_rich Low_complexity Low_complexity 1 37 0 2432 63 0 13 chr2 34096429 34096731 -216591123 - AluY SINE Alu -13 298 1 405 0 0 0 chr2 34097255 34097300 -216590554 + (CA)n Simple_repeat Simple_repeat 1 45 0 1339 146 9 9 chr2 34097313 34097533 -216590321 - AluJo SINE Alu -13 299 80 1386 196 116 19 chr2 34097850 34098161 -216589693 + MER2 DNA MER2_type 1 341 -4 193 94 0 0 chr2 34098329 34098361 -216589493 + L2 LINE L2 3022 3053 -219 2378 157 13 8 chr2 34098573 34098968 -216588886 - LOR1b LTR ERV1 0 461 65 1979 67 119 0 chr2 34098969 34099237 -216588617 + AluY SINE Alu 2 301 -10 217 287 11 0 chr2 34100946 34101040 -216586814 + (TA)n Simple_repeat Simple_repeat 2 96 0 23 0 0 0 chr2 34101926 34101949 -216585905 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 34101996 34102017 -216585837 + AT_rich Low_complexity Low_complexity 1 21 0 191 83 0 0 chr2 34102536 34102560 -216585294 - MIR SINE MIR -140 68 45 183 265 218 14 chr2 34104272 34104419 -216583435 + MIR SINE MIR 83 259 -3 256 238 199 37 chr2 34105128 34105264 -216582590 + MIR3 SINE MIR 13 165 -43 335 302 43 7 chr2 34105309 34105448 -216582406 - MIR SINE MIR -3 259 116 752 158 17 0 chr2 34108215 34108335 -216579519 - FLAM_C SINE Alu -11 122 1 312 294 159 32 chr2 34109182 34109308 -216578546 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34111039 34111325 -216576529 + AluJb SINE Alu 1 312 0 1907 101 14 20 chr2 34111509 34111805 -216576049 - AluSg SINE Alu -16 294 1 228 333 97 0 chr2 34112090 34112183 -216575671 + MIR SINE MIR 36 137 -71 2384 93 0 10 chr2 34112483 34112794 -216575060 + AluSx SINE Alu 1 308 -4 2434 90 15 0 chr2 34112794 34113128 -216574726 + L1PA14 LINE L1 5490 5828 -333 2043 102 67 0 chr2 34113129 34113413 -216574441 + AluSp SINE Alu 2 304 -9 495 293 142 5 chr2 34114501 34114706 -216573148 + MIR SINE MIR 30 262 0 488 223 85 0 chr2 34115490 34115620 -216572234 + MER5A DNA MER1_type 49 189 0 468 147 0 0 chr2 34115628 34115703 -216572151 + AluJ/FRAM SINE Alu 225 299 -13 2167 109 0 0 chr2 34115764 34116048 -216571806 - AluSg SINE Alu -26 284 1 2026 113 20 14 chr2 34116604 34116897 -216570957 - AluJb SINE Alu -17 295 1 307 272 33 11 chr2 34117102 34117194 -216570660 + CT-rich Low_complexity Low_complexity 3 96 0 427 160 126 0 chr2 34117289 34117408 -216570446 - L1ME3A LINE L1 -86 6084 5951 806 216 56 61 chr2 34118258 34118293 -216569561 - MER58A DNA MER1_type -2204 216 182 2066 146 0 7 chr2 34118293 34118595 -216569259 - AluSg SINE Alu -10 300 1 806 216 56 61 chr2 34118595 34118772 -216569082 - MER58A DNA MER1_type -2238 182 5 645 164 10 0 chr2 34118988 34119092 -216568762 - FLAM_A SINE Alu -12 130 26 1112 98 149 0 chr2 34119164 34119338 -216568516 - L1PA14 LINE L1 -2 6159 5960 195 42 0 0 chr2 34119339 34119363 -216568491 + (T)n Simple_repeat Simple_repeat 1 24 0 7822 43 0 27 chr2 34119390 34120736 -216567118 - L1PA5 LINE L1 0 6154 4830 2382 88 0 0 chr2 34121088 34121385 -216566469 + AluY SINE Alu 1 297 -14 406 223 155 10 chr2 34121445 34121548 -216566306 - L2 LINE L2 0 3313 3196 2226 98 0 23 chr2 34121645 34121952 -216565902 - AluSx SINE Alu -12 300 1 526 294 13 7 chr2 34122316 34122469 -216565385 - LTR16A LTR ERVL -2 448 295 2778 249 102 44 chr2 34122471 34122834 -216565020 - Charlie7 DNA MER1_type -1090 1522 1181 2328 80 3 10 chr2 34122834 34123133 -216564721 + AluSq SINE Alu 1 297 -16 2778 249 102 44 chr2 34123133 34123975 -216563879 - Charlie7 DNA MER1_type -1431 1181 242 1580 189 0 27 chr2 34123975 34124272 -216563582 - AluJo SINE Alu -23 289 1 2778 249 102 44 chr2 34124272 34124303 -216563551 - Charlie7 DNA MER1_type -2370 242 214 235 245 38 0 chr2 34124305 34124358 -216563496 + MLT1J2 LTR MaLR 392 446 -4 529 311 115 17 chr2 34124394 34124629 -216563225 - L3 LINE CR1 -688 889 632 2574 66 0 0 chr2 34125094 34125397 -216562457 + AluSx SINE Alu 1 303 -9 221 395 40 0 chr2 34125488 34125612 -216562242 - L2 LINE L2 -938 2376 2248 1212 203 4 4 chr2 34125815 34126051 -216561803 + AluJo SINE Alu 59 294 -18 1770 120 71 4 chr2 34126616 34126903 -216560951 + AluSx SINE Alu 3 307 0 2165 75 13 32 chr2 34127220 34127528 -216560326 - AluY SINE Alu -9 302 1 2321 103 3 6 chr2 34127541 34127852 -216560002 - AluSg SINE Alu 0 310 1 311 286 135 51 chr2 34128508 34128878 -216558976 + MLT1K LTR MaLR 188 588 0 2353 62 0 0 chr2 34128948 34129222 -216558632 + AluY SINE Alu 1 274 -37 183 42 0 0 chr2 34129222 34129246 -216558608 + (CA)n Simple_repeat Simple_repeat 1 24 0 313 266 38 87 chr2 34129621 34129805 -216558049 + MLT1K LTR MaLR 219 393 -195 215 345 115 7 chr2 34130238 34130377 -216557477 - MIR SINE MIR -89 173 20 2620 40 3 0 chr2 34130628 34130928 -216556926 - AluY SINE Alu -8 303 3 2216 62 21 92 chr2 34131344 34131681 -216556173 - AluYb8 SINE Alu -5 313 1 1261 165 0 36 chr2 34131795 34132019 -216555835 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34132306 34132441 -216555413 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34132329 34132443 -216555411 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34132449 34132508 -216555346 - Alu SINE Alu -2 298 240 2038 139 3 3 chr2 34132548 34132849 -216555005 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34133615 34133700 -216554154 + L3 LINE CR1 1488 1575 -2 1846 82 0 0 chr2 34134313 34134545 -216553309 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34134582 34134738 -216553116 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34134795 34135068 -216552786 - MLT1E LTR MaLR -97 496 200 282 247 0 14 chr2 34137043 34137116 -216550738 + CT-rich Low_complexity Low_complexity 2 73 0 2459 76 0 0 chr2 34137310 34137611 -216550243 + AluSx SINE Alu 1 301 -11 297 169 182 0 chr2 34138029 34138106 -216549748 - MER5A DNA MER1_type -3 186 96 2244 94 3 19 chr2 34138147 34138456 -216549398 - AluSc SINE Alu -5 304 1 28 48 0 0 chr2 34139865 34139907 -216547947 + AT_rich Low_complexity Low_complexity 1 42 0 2214 107 7 0 chr2 34141122 34141421 -216546433 + AluSx SINE Alu 1 301 -11 779 159 19 111 chr2 34142308 34142516 -216545338 - MER53 DNA DNA 0 189 1 543 273 58 11 chr2 34143065 34143263 -216544591 - MIR SINE MIR 0 262 52 585 241 50 87 chr2 34143599 34143732 -216544122 - L1MA9 LINE L1 -123 6189 6053 1846 163 7 3 chr2 34143732 34144033 -216543821 - AluJb SINE Alu -10 302 1 585 241 50 87 chr2 34144033 34144198 -216543656 - L1MA9 LINE L1 -259 6053 5902 692 195 144 82 chr2 34144711 34145009 -216542845 + L1ME4a LINE L1 5709 6038 -83 1616 98 0 0 chr2 34145009 34145214 -216542640 + AluSg/x SINE Alu 87 291 -21 692 195 144 82 chr2 34145214 34145304 -216542550 + L1ME4a LINE L1 6038 6121 0 1230 163 22 132 chr2 34146436 34146457 -216541397 - MER33 DNA MER1_type -2261 324 302 1521 179 20 27 chr2 34146457 34146754 -216541100 + AluJo SINE Alu 18 312 0 1230 163 22 132 chr2 34146754 34146873 -216540981 - MER33 DNA MER1_type -2283 302 171 1589 169 7 25 chr2 34146873 34147152 -216540702 + AluJo SINE Alu 12 285 -27 1230 163 22 132 chr2 34147152 34147373 -216540481 - MER33 DNA MER1_type -2414 171 2 22 0 0 0 chr2 34148453 34148475 -216539379 + AT_rich Low_complexity Low_complexity 1 22 0 24 96 0 0 chr2 34148536 34148609 -216539245 + AT_rich Low_complexity Low_complexity 1 73 0 186 43 0 0 chr2 34148987 34149010 -216538844 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2261 63 7 11 chr2 34149012 34149299 -216538555 - AluY SINE Alu -25 286 1 1667 63 0 5 chr2 34149703 34149909 -216537945 + AluY SINE Alu 1 205 -106 477 35 0 0 chr2 34149909 34149966 -216537888 + AluY SINE Alu 244 300 -11 1942 123 42 3 chr2 34150282 34150566 -216537288 - AluSx SINE Alu -17 295 1 2761 158 12 26 chr2 34151188 34151688 -216536166 + L1MB4 LINE L1 5687 6179 -1 310 71 0 0 chr2 34151714 34151756 -216536098 + L1MB8 LINE L1 6131 6172 -6 2196 107 3 0 chr2 34152320 34152609 -216535245 + AluSc SINE Alu 1 290 -19 678 248 66 30 chr2 34152717 34152915 -216534939 - MLT1F1 LTR MaLR -8 559 355 2214 57 0 50 chr2 34153430 34153753 -216534101 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34155007 34155028 -216532826 + AT_rich Low_complexity Low_complexity 1 21 0 1539 138 179 25 chr2 34155609 34155934 -216531920 - THE1C LTR MaLR 0 375 1 333 0 0 0 chr2 34156097 34156134 -216531720 + (TG)n Simple_repeat Simple_repeat 2 38 0 2013 110 3 21 chr2 34156150 34156441 -216531413 - AluSx SINE Alu -25 287 2 296 77 0 0 chr2 34157069 34157108 -216530746 + MADE1 DNA Mariner 2 40 -40 2347 106 0 3 chr2 34157108 34157420 -216530434 - AluY SINE Alu 0 311 1 1720 132 73 45 chr2 34158206 34158495 -216529359 + AluSq SINE Alu 1 297 -16 388 247 0 21 chr2 34158506 34158599 -216529255 - MIR3 SINE MIR -6 202 112 562 189 9 0 chr2 34158648 34158754 -216529100 - L1MB5 LINE L1 0 6174 6068 275 261 190 62 chr2 34159716 34159927 -216527927 + MIR SINE MIR 20 257 -5 2546 235 57 16 chr2 34160406 34161692 -216526162 - L1M2c LINE L1 -4504 2603 1275 255 265 0 0 chr2 34161928 34161996 -216525858 + C-rich Low_complexity Low_complexity 4 71 0 1879 153 0 3 chr2 34162137 34162424 -216525430 - AluJb SINE Alu -26 286 1 2109 121 0 0 chr2 34162641 34162958 -216524896 - AluSx SINE Alu 0 319 3 2091 116 7 7 chr2 34163520 34163813 -216524041 + AluSx SINE Alu 1 293 -19 201 154 0 0 chr2 34163836 34163875 -216523979 + (TG)n Simple_repeat Simple_repeat 2 40 0 760 97 0 0 chr2 34163876 34163969 -216523885 - 7SLRNA srpRNA srpRNA -17 303 211 336 39 77 19 chr2 34163973 34164025 -216523829 + MLT2A2 LTR ERVL 399 453 0 1102 129 129 77 chr2 34164025 34164273 -216523581 + LTR1B LTR ERV1 355 615 -211 4168 79 5 17 chr2 34164391 34164976 -216522878 - L1P LINE L1 -962 5184 4607 1603 63 0 5 chr2 34164974 34165181 -216522673 - L1PA14 LINE L1 -187 5974 5769 * 231 279 33 0 chr2 34165314 34165375 -216522479 - MIR SINE MIR -116 146 84 193 307 183 46 chr2 34165442 34165595 -216522259 - MIR3 SINE MIR -25 183 10 2015 112 17 7 chr2 34166290 34166633 -216521221 - AluSx SINE Alu 0 359 14 2015 112 17 7 chr2 34168328 34168671 -216519183 - AluSx SINE Alu 0 359 14 779 113 105 8 chr2 34169533 34169666 -216518188 + L1MB3 LINE L1 6029 6174 -9 2291 82 0 50 chr2 34169666 34169984 -216517870 - AluY SINE Alu -9 302 1 897 175 19 0 chr2 34171658 34171817 -216516037 + MLT1B LTR MaLR 1 162 -228 2145 197 130 46 chr2 34171817 34172486 -216515368 - MER50 LTR ERV1 0 734 10 1291 126 31 27 chr2 34172493 34172716 -216515138 + MLT1B LTR MaLR 167 390 0 1506 130 22 115 chr2 34172940 34173263 -216514591 + AluYb8 SINE Alu 1 293 -25 832 184 17 46 chr2 34173283 34173457 -216514397 + MLT1D LTR MaLR 5 173 -332 1247 143 0 11 chr2 34173539 34173728 -216514126 + AluJb SINE Alu 1 187 -125 333 242 15 0 chr2 34173731 34173797 -216514057 + MLT1E2 LTR MaLR 530 596 -30 1960 126 0 14 chr2 34174288 34174609 -216513245 - AluSx SINE Alu 0 317 1 2210 89 0 10 chr2 34175178 34175469 -216512385 + AluSc SINE Alu 1 288 -21 1432 183 114 34 chr2 34175683 34175734 -216512120 + MER34C LTR ERV1 36 82 -503 2401 77 0 3 chr2 34175734 34176032 -216511822 - AluSc SINE Alu -12 297 1 1432 183 114 34 chr2 34176032 34176454 -216511400 + MER34C LTR ERV1 82 581 -4 2150 123 0 0 chr2 34176862 34177163 -216510691 + AluSq SINE Alu 1 301 -12 230 300 50 20 chr2 34177190 34177290 -216510564 - L2 LINE L2 -343 2929 2827 358 297 45 18 chr2 34177970 34178081 -216509773 - L2 LINE L2 -1 3312 3199 2418 65 0 0 chr2 34178215 34178507 -216509347 - AluY SINE Alu -15 296 5 226 263 11 84 chr2 34178649 34178744 -216509110 + MIR SINE MIR 18 105 -103 23 33 0 0 chr2 34179380 34179410 -216508444 + AT_rich Low_complexity Low_complexity 1 30 0 345 356 20 14 chr2 34179678 34179824 -216508030 - L1M4 LINE L1 -1300 4846 4700 6123 142 26 27 chr2 34179845 34181002 -216506852 - L1MC2 LINE L1 0 6344 5186 1144 266 139 20 chr2 34180987 34181678 -216506176 - L1M4 LINE L1 -1462 4684 3912 * 2278 104 0 28 chr2 34182494 34182811 -216505043 + AluSq SINE Alu 1 308 -5 360 178 0 0 chr2 34183026 34183099 -216504755 + CT-rich Low_complexity Low_complexity 2 74 0 183 42 0 0 chr2 34183094 34183118 -216504736 + (TTCCC)n Simple_repeat Simple_repeat 1 24 0 * 2177 104 14 0 chr2 34183118 34183405 -216504449 - AluSx SINE Alu -21 291 1 1980 88 0 0 chr2 34183532 34183783 -216504071 + AluY SINE Alu 44 294 -17 2589 47 0 3 chr2 34184720 34185019 -216502835 - AluY SINE Alu -13 298 1 312 27 0 0 chr2 34185511 34185548 -216502306 + (TG)n Simple_repeat Simple_repeat 2 38 0 2927 3 3 0 chr2 34185891 34186205 -216501649 + AluYb8 SINE Alu 1 315 -3 2230 96 3 3 chr2 34187664 34187957 -216499897 + AluY SINE Alu 1 293 -18 1362 198 133 35 chr2 34188406 34188744 -216499110 + MLT1A2 LTR MaLR 4 374 0 1902 164 20 49 chr2 34191149 34191496 -216496358 - MER1B DNA MER1_type 0 337 1 811 199 0 0 chr2 34191570 34191701 -216496153 + FLAM_C SINE Alu 6 136 -7 509 268 84 55 chr2 34191715 34192025 -216495829 - Charlie8 DNA MER1_type -2053 364 46 2022 153 3 10 chr2 34192529 34192843 -216495011 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 34193061 34193083 -216494771 + AT_rich Low_complexity Low_complexity 1 22 0 346 263 0 0 chr2 34193924 34194000 -216493854 + CT-rich Low_complexity Low_complexity 3 78 0 892 239 39 35 chr2 34194116 34194375 -216493479 - MIR SINE MIR 0 262 3 191 306 153 42 chr2 34194745 34194889 -216492965 + L2 LINE L2 3104 3263 -9 1879 128 31 7 chr2 34195240 34195529 -216492325 + AluSx SINE Alu 1 296 -16 201 250 0 0 chr2 34195720 34195768 -216492086 + A-rich Low_complexity Low_complexity 5 52 0 690 132 0 0 chr2 34196674 34196810 -216491044 + (T)n Simple_repeat Simple_repeat 1 136 0 213 288 0 0 chr2 34196813 34196886 -216490968 + T-rich Low_complexity Low_complexity 1 73 0 1588 231 52 30 chr2 34197207 34197648 -216490206 + MLT1C LTR MaLR 5 455 -12 2434 52 7 0 chr2 34197995 34198286 -216489568 - AluY SINE Alu -16 295 3 2170 62 21 95 chr2 34198702 34199040 -216488814 - AluYb8 SINE Alu -5 313 1 1231 164 0 40 chr2 34199154 34199379 -216488475 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34199666 34199801 -216488053 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34199689 34199803 -216488051 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34199809 34199868 -216487986 - Alu SINE Alu -2 298 240 2038 139 3 3 chr2 34199908 34200209 -216487645 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34200975 34201060 -216486794 + L3 LINE CR1 1488 1575 -2 1829 86 0 0 chr2 34201676 34201908 -216485946 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34201945 34202101 -216485753 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34202158 34202431 -216485423 - MLT1E LTR MaLR -97 496 200 1943 137 7 13 chr2 34204364 34204671 -216483183 - AluSx SINE Alu -4 308 4 249 229 143 0 chr2 34204796 34204866 -216482988 - L2 LINE L2 -10 3303 3224 1218 338 62 13 chr2 34204878 34205556 -216482298 - L2 LINE L2 -998 2316 1606 1417 164 117 4 chr2 34205873 34206147 -216481707 + AluJb SINE Alu 3 307 -5 1342 184 0 18 chr2 34206482 34206705 -216481149 - MER20 DNA MER1_type 0 219 1 701 165 0 10 chr2 34207787 34207890 -216479964 - AluJb SINE Alu -209 103 2 742 188 0 0 chr2 34207950 34208062 -216479792 - FLAM_A SINE Alu -12 130 19 304 365 54 10 chr2 34208149 34208352 -216479502 + L2 LINE L2 2380 2591 -723 691 227 36 50 chr2 34208478 34208756 -216479098 + L1MC5 LINE L1 7637 7910 -51 237 364 0 80 chr2 34208910 34209061 -216478793 + L2 LINE L2 2957 3095 -177 2049 135 3 25 chr2 34209241 34209580 -216478274 + AluSx SINE Alu 1 332 0 2258 108 3 0 chr2 34210475 34210772 -216477082 - AluSp SINE Alu -15 298 1 252 322 117 2 chr2 34210805 34210971 -216476883 + MIR SINE MIR 3 184 -67 2316 109 0 0 chr2 34211900 34212202 -216475652 + AluSx SINE Alu 1 302 -10 1888 88 8 4 chr2 34213832 34214082 -216473772 + AluY SINE Alu 44 294 -17 180 0 0 0 chr2 34214303 34214323 -216473531 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2270 86 33 0 chr2 34215053 34215356 -216472498 - AluSp SINE Alu 0 313 1 22 56 0 0 chr2 34215745 34215781 -216472073 + AT_rich Low_complexity Low_complexity 1 36 0 2410 71 0 3 chr2 34216096 34216392 -216471462 + AluY SINE Alu 1 295 -16 2314 110 0 0 chr2 34216406 34216707 -216471147 + AluSx SINE Alu 1 301 -11 2380 82 3 3 chr2 34216949 34217255 -216470599 + AluY SINE Alu 1 306 -5 353 304 25 20 chr2 34217267 34217435 -216470419 + MIR SINE MIR 16 182 -61 2545 43 7 3 chr2 34218067 34218367 -216469487 + AluY SINE Alu 1 301 -10 326 256 35 35 chr2 34219328 34219414 -216468440 + HAL1 LINE L1 3 88 -2419 613 167 0 26 chr2 34219416 34219530 -216468324 - L1M3e LINE L1 -6913 117 7 1297 236 64 21 chr2 34219530 34219857 -216467997 - MLT1F LTR MaLR -201 341 1 572 192 33 0 chr2 34220009 34220129 -216467725 - MLT1B LTR MaLR -46 344 221 385 195 23 11 chr2 34220232 34220319 -216467535 - MLT1B LTR MaLR -92 298 211 301 267 35 35 chr2 34220632 34220718 -216467136 + HAL1 LINE L1 3 88 -2419 472 260 13 78 chr2 34220727 34220881 -216466973 + HAL1 LINE L1 410 553 -1954 252 301 19 58 chr2 34221022 34221125 -216466729 - MLT1K LTR MaLR -362 226 128 400 250 203 37 chr2 34222337 34222637 -216465217 - L1MEc LINE L1 -4070 2326 1977 483 225 18 0 chr2 34222701 34222812 -216465042 - L1MA10 LINE L1 -3 6331 6219 1483 147 121 11 chr2 34222998 34223270 -216464584 - AluSg1 SINE Alu -7 302 1 277 313 85 24 chr2 34223735 34223915 -216463939 - MIR SINE MIR -67 141 3 21 57 0 0 chr2 34224417 34224452 -216463402 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 34225079 34225100 -216462754 + AT_rich Low_complexity Low_complexity 1 21 0 2427 57 0 27 chr2 34225234 34225533 -216462321 - AluY SINE Alu -20 291 1 2166 177 6 5 chr2 34225605 34226097 -216461757 - MER67A LTR ERV1 -2 541 1 517 291 62 36 chr2 34226121 34226396 -216461458 + L1MC4a LINE L1 5619 5900 -1908 2074 131 3 3 chr2 34226616 34226914 -216460940 - AluSx SINE Alu -14 298 1 1964 132 11 0 chr2 34227374 34227676 -216460178 - AluSx SINE Alu 0 305 1 2243 94 16 7 chr2 34228466 34228775 -216459079 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 34229053 34229073 -216458781 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 230 261 0 15 chr2 34229490 34229555 -216458299 + A-rich Low_complexity Low_complexity 4 67 0 2327 94 0 10 chr2 34229691 34229998 -216457856 - AluSg SINE Alu -6 304 1 406 192 0 14 chr2 34230024 34230097 -216457757 + Tigger1 DNA MER2_type 4 75 -2343 207 0 0 0 chr2 34232082 34232105 -216455749 + (A)n Simple_repeat Simple_repeat 1 23 0 734 217 0 0 chr2 34232350 34232493 -216455361 + FRAM SINE Alu 1 140 -36 612 53 69 0 chr2 34232510 34232641 -216455213 + (TA)n Simple_repeat Simple_repeat 1 140 0 835 95 17 0 chr2 34233782 34233898 -216453956 - MER41A LTR ERV1 -265 289 172 195 167 0 0 chr2 34234089 34234131 -216453723 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 3301 100 30 22 chr2 34234438 34235016 -216452838 - MER41A LTR ERV1 0 635 21 1706 142 3 30 chr2 34235016 34235312 -216452542 + AluJb SINE Alu 13 300 -12 2894 3 0 0 chr2 34235819 34236127 -216451727 - AluYa5 SINE Alu -3 308 1 2047 76 0 0 chr2 34236988 34237250 -216450604 - AluY SINE Alu -49 262 1 519 220 262 0 chr2 34237422 34237563 -216450291 + MER45A DNA AcHobo 1 178 0 459 126 147 11 chr2 34238048 34238143 -216449711 - MER53 DNA DNA 0 189 82 447 216 24 0 chr2 34238197 34238322 -216449532 - MER53 DNA DNA -55 134 7 12783 122 38 19 chr2 34238473 34239333 -216448521 - Tigger4(Zombi) DNA MER2_type 0 2731 1889 2068 133 7 0 chr2 34239333 34239633 -216448221 + AluSx SINE Alu 1 302 -10 12783 122 38 19 chr2 34239633 34239714 -216448140 - Tigger4(Zombi) DNA MER2_type -842 1889 1811 2169 93 26 16 chr2 34239714 34240024 -216447830 + AluSq SINE Alu 1 313 0 12783 122 38 19 chr2 34240024 34241103 -216446751 - Tigger4(Zombi) DNA MER2_type -920 1811 672 2254 94 10 19 chr2 34241112 34241419 -216446435 - AluSx SINE Alu -8 304 1 297 217 0 0 chr2 34241421 34241481 -216446373 + Tigger1 DNA MER2_type 2359 2418 0 300 257 18 26 chr2 34241481 34241594 -216446260 - MIR SINE MIR -27 235 124 477 164 58 19 chr2 34241611 34241715 -216446139 - L1MB7 LINE L1 -19 6165 6058 762 164 164 11 chr2 34241722 34241929 -216445925 - MER33 DNA MER1_type -96 228 1 353 260 29 33 chr2 34241942 34242092 -216445762 - L1MD3 LINE L1 0 7995 6206 5045 148 29 14 chr2 34242142 34243788 -216444066 - L1PB1 LINE L1 -3 6148 4476 189 0 0 0 chr2 34244044 34244065 -216443789 + (A)n Simple_repeat Simple_repeat 1 21 0 2074 126 7 0 chr2 34244070 34244372 -216443482 + AluSx SINE Alu 1 304 -8 2102 91 10 10 chr2 34244375 34244673 -216443181 + AluSq SINE Alu 4 301 -12 21 0 0 31 chr2 34244843 34244855 -216442999 + AT_rich Low_complexity Low_complexity 1 12 -19 279 0 0 0 chr2 34244855 34244886 -216442968 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 0 0 31 chr2 34244886 34244905 -216442949 + AT_rich Low_complexity Low_complexity 12 31 0 511 270 51 0 chr2 34245065 34245243 -216442611 - MIR SINE MIR 0 262 76 552 242 22 28 chr2 34245822 34246000 -216441854 - MER5B DNA MER1_type -1 177 1 211 372 41 33 chr2 34248204 34248325 -216439529 - L2 LINE L2 -49 3223 3102 1413 270 58 66 chr2 34248674 34249448 -216438406 + L2 LINE L2 1545 2312 -1002 718 226 37 46 chr2 34249539 34249756 -216438098 + L2 LINE L2 3099 3313 0 373 224 17 43 chr2 34249914 34250030 -216437824 + MLT1J2 LTR MaLR 320 432 -18 363 377 80 14 chr2 34250096 34250372 -216437482 - L2 LINE L2 -2 3270 2977 2284 116 0 0 chr2 34251315 34251626 -216436228 - AluY SINE Alu 0 311 1 188 294 10 108 chr2 34251713 34251815 -216436039 - L2 LINE L2 -44 3228 3137 1004 332 76 23 chr2 34251878 34252714 -216435140 + L2 LINE L2 2391 3271 -1 1658 272 82 52 chr2 34253262 34253356 -216434498 + HAL1 LINE L1 240 330 -2177 1714 191 3 0 chr2 34253356 34253650 -216434204 + AluJo SINE Alu 1 295 -17 1927 108 3 76 chr2 34253650 34253964 -216433890 + AluSx SINE Alu 1 292 -20 1658 272 82 52 chr2 34253964 34254372 -216433482 + HAL1 LINE L1 330 724 -1783 1558 176 74 3 chr2 34254372 34254656 -216433198 - AluJb SINE Alu -8 304 1 1658 272 82 52 chr2 34254656 34255224 -216432630 + HAL1 LINE L1 724 1381 -1126 3753 88 37 45 chr2 34255224 34255811 -216432043 + MER4E LTR ERV1 1 551 -228 2999 66 8 2 chr2 34255811 34256204 -216431650 - L1PA7 LINE L1 0 6154 5760 3753 88 37 45 chr2 34256204 34256432 -216431422 + MER4E LTR ERV1 551 779 0 688 231 71 52 chr2 34256438 34256707 -216431147 + HAL1 LINE L1 1398 1671 -836 2741 126 45 56 chr2 34256758 34257371 -216430483 - MER4B LTR ERV1 -9 770 1 1072 231 112 62 chr2 34257371 34258021 -216429833 + HAL1 LINE L1 1725 2407 -100 23 68 0 0 chr2 34258065 34258109 -216429745 + AT_rich Low_complexity Low_complexity 1 44 0 371 324 119 11 chr2 34258333 34258500 -216429354 - L3 LINE CR1 -8 1569 1381 2109 141 3 0 chr2 34258500 34258806 -216429048 - AluSp SINE Alu -6 307 1 2026 117 37 3 chr2 34258818 34259117 -216428737 - AluSc SINE Alu 0 309 1 1864 95 114 4 chr2 34259122 34259386 -216428468 - AluSg SINE Alu -17 293 1 216 0 0 0 chr2 34260201 34260225 -216427629 + (A)n Simple_repeat Simple_repeat 1 24 0 2289 100 17 7 chr2 34260371 34260672 -216427182 - AluSp SINE Alu -9 304 1 707 286 107 30 chr2 34260776 34261139 -216426715 - L2 LINE L2 0 3313 2923 566 258 194 26 chr2 34261257 34261598 -216426256 + LTR16A LTR ERVL 52 449 -1 1099 191 5 14 chr2 34261646 34261855 -216425999 + AluJo SINE Alu 88 294 -18 2345 72 14 0 chr2 34261910 34262200 -216425654 + AluY SINE Alu 1 294 -17 353 292 164 37 chr2 34262253 34262551 -216425303 + L2 LINE L2 2628 2963 -351 2780 77 0 0 chr2 34262947 34263300 -216424554 - THE1A LTR MaLR -2 353 1 356 316 102 26 chr2 34263752 34263953 -216423901 + MIR SINE MIR 3 214 -48 312 70 0 0 chr2 34266856 34266899 -216420955 + (TTGG)n Simple_repeat Simple_repeat 2 44 0 1792 194 62 60 chr2 34267125 34267629 -216420225 + MLT1D LTR MaLR 1 505 0 895 188 7 0 chr2 34267887 34268041 -216419813 - FRAM SINE Alu -19 157 3 2426 75 0 10 chr2 34268046 34268353 -216419501 - AluY SINE Alu -7 304 1 6983 237 25 61 chr2 34268353 34270402 -216417452 - L1PA13 LINE L1 -4809 1978 3 713 249 69 4 chr2 34270409 34270642 -216417212 - L1M4 LINE L1 -1875 4769 4522 1119 259 97 8 chr2 34270704 34271075 -216416779 - MLT1D LTR MaLR -86 419 16 807 275 27 27 chr2 34271085 34271568 -216416286 - L1M4 LINE L1 -2544 4100 3618 * 2191 234 38 15 chr2 34271558 34272005 -216415849 - L1M4 LINE L1 -4568 2078 1610 2185 131 22 33 chr2 34272005 34272371 -216415483 - THE1B LTR MaLR 0 364 3 2191 234 38 15 chr2 34272371 34272584 -216415270 - L1M4 LINE L1 -5036 1610 1403 792 246 39 0 chr2 34272584 34272791 -216415063 - L1M4 LINE L1 -6314 228 14 1106 217 25 52 chr2 34274801 34275087 -216412767 + L1M4c LINE L1 1598 1875 -5611 * 1659 233 35 41 chr2 34275080 34275242 -216412612 + L1M4c LINE L1 2224 2385 -5182 10118 170 5 1 chr2 34275242 34275699 -216412155 + L1PA14 LINE L1 3337 3791 -2370 2694 93 3 0 chr2 34275699 34276052 -216411802 + THE1A LTR MaLR 2 355 0 11211 97 12 21 chr2 34276052 34277644 -216410210 + THE1A-int LTR MaLR 1 1578 -2 2539 92 20 0 chr2 34277646 34277994 -216409860 + THE1A LTR MaLR 1 355 0 10118 170 5 1 chr2 34277994 34279347 -216408507 + L1PA14 LINE L1 3791 5162 -999 2157 116 13 0 chr2 34279347 34279650 -216408204 + AluSp SINE Alu 1 307 -6 10118 170 5 1 chr2 34279650 34280652 -216407202 + L1PA14 LINE L1 5162 6159 -2 1659 233 35 41 chr2 34280652 34281055 -216406799 + L1M4c LINE L1 2385 2786 -4781 647 206 0 0 chr2 34281061 34281168 -216406686 + FLAM_A SINE Alu 1 107 -35 243 0 0 0 chr2 34281176 34281203 -216406651 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 751 293 61 34 chr2 34281214 34281261 -216406593 + L1MA4 LINE L1 2868 2912 -4653 2370 100 0 0 chr2 34281261 34281560 -216406294 + AluSx SINE Alu 1 299 -13 751 293 61 34 chr2 34281560 34282288 -216405566 + L1MA4 LINE L1 2912 3664 -3901 * 9127 184 37 16 chr2 34282261 34282801 -216405053 + L1MA4 LINE L1 4269 4796 -2794 189 0 0 0 chr2 34282801 34282822 -216405032 + (CCTAA)n Simple_repeat Simple_repeat 5 25 0 9127 184 37 16 chr2 34282822 34284029 -216403825 + L1MA4 LINE L1 4796 5977 -1613 2512 83 0 0 chr2 34284029 34284331 -216403523 - AluY SINE Alu -8 303 2 9127 184 37 16 chr2 34284331 34287171 -216400683 + L1MA4 LINE L1 5977 7587 -3 565 258 148 25 chr2 34287203 34287447 -216400407 - L2 LINE L2 0 3313 3040 2559 261 138 26 chr2 34288868 34289725 -216398129 + MER45C DNA AcHobo 1 953 0 2321 94 7 0 chr2 34290124 34290433 -216397421 + AluSp SINE Alu 1 311 -2 904 39 45 34 chr2 34290846 34291024 -216396830 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3746 124 68 47 chr2 34291999 34292434 -216395420 - Tigger3(Golem) DNA MER2_type 0 3029 2605 355 45 0 0 chr2 34292434 34292478 -216395376 + (TTTA)n Simple_repeat Simple_repeat 2 108 0 2302 74 3 0 chr2 34292478 34292762 -216395092 - AluSp SINE Alu -1 328 1 3746 124 68 47 chr2 34292762 34292795 -216395059 - Tigger3(Golem) DNA MER2_type -424 2605 2574 2390 85 3 10 chr2 34292795 34293101 -216394753 + AluY SINE Alu 3 306 -5 3746 124 68 47 chr2 34293101 34293290 -216394564 - Tigger3(Golem) DNA MER2_type -455 2574 2352 2074 116 33 7 chr2 34293290 34293592 -216394262 + AluSx SINE Alu 1 310 -2 3746 124 68 47 chr2 34293592 34293640 -216394214 - Tigger3(Golem) DNA MER2_type -677 2352 2306 678 179 0 0 chr2 34293642 34293748 -216394106 - Tigger3(Golem) DNA MER2_type -2923 106 1 1149 276 47 5 chr2 34294233 34294638 -216393216 - Charlie4a DNA MER1_type -6 502 81 709 168 0 67 chr2 34294766 34294915 -216392939 + FRAM SINE Alu 38 176 0 827 165 0 0 chr2 34295121 34295248 -216392606 - FRAM SINE Alu -49 127 1 2015 150 0 0 chr2 34295973 34296273 -216391581 + AluJb SINE Alu 1 300 -12 337 242 121 0 chr2 34296746 34296837 -216391017 - MLT1L LTR MaLR -28 587 486 686 147 9 0 chr2 34296934 34297050 -216390804 - MER97a DNA MER1_type? -725 169 53 25 75 0 0 chr2 34297801 34297854 -216390000 + AT_rich Low_complexity Low_complexity 1 53 0 227 295 65 42 chr2 34299531 34299860 -216387994 + L1MC4a LINE L1 4076 4456 -1690 2064 129 3 3 chr2 34299860 34300154 -216387700 + AluSx SINE Alu 1 294 -18 227 295 65 42 chr2 34300154 34300349 -216387505 + L1MC4a LINE L1 4456 4645 -1501 461 248 16 16 chr2 34300409 34300534 -216387320 + L1MC4a LINE L1 5792 5916 -1892 2006 107 44 0 chr2 34300743 34301060 -216386794 - AluY SINE Alu 0 329 1 912 136 0 0 chr2 34301500 34301625 -216386229 - FLAM_C SINE Alu -6 127 3 1603 181 7 27 chr2 34301910 34302209 -216385645 + AluJb SINE Alu 1 293 -19 219 221 0 35 chr2 34302277 34302363 -216385491 + (TAAA)n Simple_repeat Simple_repeat 2 84 0 307 260 0 14 chr2 34302842 34302915 -216384939 - LTR28 LTR ERV1 0 1020 949 2778 164 81 22 chr2 34302956 34303516 -216384338 - LTR28 LTR ERV1 -446 574 1 10742 132 35 19 chr2 34303517 34305510 -216382344 - LTR17-int LTR ERV1 -1 6995 2244 2452 58 55 0 chr2 34305515 34305824 -216382030 - LTR17 LTR ERV1 -454 326 1 2367 69 3 0 chr2 34305824 34306115 -216381739 - HERV17 LTR ERV1 0 8626 8335 29770 45 14 6 chr2 34306136 34307750 -216380104 - HERV17 LTR ERV1 -2607 6019 4419 2361 98 3 0 chr2 34307750 34308047 -216379807 + AluY SINE Alu 1 298 -13 29770 45 14 6 chr2 34308047 34309994 -216377860 - HERV17 LTR ERV1 -4207 4419 2430 9640 69 6 3 chr2 34309986 34311189 -216376665 - LTR17-int LTR ERV1 -6619 2007 802 * 5418 72 6 18 chr2 34311337 34312042 -216375812 - LTR17-int LTR ERV1 -7930 696 1 3443 86 60 16 chr2 34312042 34312545 -216375309 - LTR17 LTR ERV1 0 780 256 2781 121 0 15 chr2 34312546 34312943 -216374911 - LTR28-int LTR ERV1 -4929 2608 2218 2533 154 21 46 chr2 34312934 34313109 -216374745 - LTR28-int LTR ERV1 -4495 1451 1273 * 3662 24 17 0 chr2 34313109 34313518 -216374336 - L1PA3 LINE L1 0 6155 5740 2533 154 21 46 chr2 34313518 34313816 -216374038 - LTR28-int LTR ERV1 -4673 1273 990 498 195 0 11 chr2 34313816 34313903 -216373951 - LTR28-int LTR ERV1 -885 3995 3910 6953 171 64 30 chr2 34313917 34315315 -216372539 - LTR28-int LTR ERV1 -451 4766 206 364 197 0 15 chr2 34315383 34315449 -216372405 - LTR28 LTR ERV1 -2 1018 954 2763 169 75 24 chr2 34315511 34316060 -216371794 - LTR28 LTR ERV1 -443 577 1 1824 160 0 20 chr2 34316140 34316433 -216371421 + AluJo SINE Alu 1 287 -25 780 28 28 0 chr2 34316490 34316597 -216371257 + (TAGA)n Simple_repeat Simple_repeat 1 110 0 431 254 56 42 chr2 34317453 34317595 -216370259 - MIR SINE MIR -52 210 67 378 226 19 0 chr2 34318245 34318330 -216369524 + MER67A LTR ERV1 4 92 -374 203 122 0 49 chr2 34318523 34318564 -216369290 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 2603 64 0 6 chr2 34318756 34319069 -216368785 - AluY SINE Alu 0 311 1 477 312 91 56 chr2 34319128 34319558 -216368296 - L1M4 LINE L1 -3044 3102 2658 951 248 54 29 chr2 34319579 34319821 -216368033 + MIR SINE MIR 5 252 -10 969 216 120 10 chr2 34319871 34320163 -216367691 - MER33 DNA MER1_type 0 324 1 2407 65 0 10 chr2 34320382 34320688 -216367166 - AluY SINE Alu -8 303 1 2416 86 3 0 chr2 34320710 34321012 -216366842 - AluSp SINE Alu -10 303 1 306 298 21 0 chr2 34321448 34321542 -216366312 + LTR37B LTR ERV1 5 100 -368 844 157 42 30 chr2 34321561 34321727 -216366127 + MER5A DNA MER1_type 2 169 -20 1085 190 51 42 chr2 34321729 34321945 -216365909 + MER20 DNA MER1_type 1 218 -1 451 97 0 0 chr2 34322061 34322118 -216365736 + LTR37B LTR ERV1 198 254 -214 434 186 20 41 chr2 34322118 34322230 -216365624 - MLT1F LTR MaLR -2 540 444 192 77 0 0 chr2 34322750 34322776 -216365078 + (TG)n Simple_repeat Simple_repeat 2 27 0 2029 118 25 4 chr2 34322813 34323093 -216364761 - AluSx SINE Alu -26 286 1 936 175 0 24 chr2 34323143 34323309 -216364545 - FRAM SINE Alu -4 172 11 410 310 19 19 chr2 34323319 34323477 -216364377 - L1MC4 LINE L1 -360 7682 7525 2040 100 14 3 chr2 34324058 34324347 -216363507 - AluY SINE Alu -9 302 11 433 297 55 44 chr2 34324507 34324689 -216363165 - MIR SINE MIR -56 206 23 267 31 0 0 chr2 34325335 34325367 -216362487 + (TG)n Simple_repeat Simple_repeat 2 33 0 838 181 36 91 chr2 34325375 34325596 -216362258 + MER6B DNA MER2_type 2 210 0 210 307 158 0 chr2 34326151 34326252 -216361602 + L2 LINE L2 3146 3262 -10 263 28 28 0 chr2 34327149 34327185 -216360669 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 1918 152 7 10 chr2 34327807 34328110 -216359744 + AluJo SINE Alu 1 302 -10 235 261 14 0 chr2 34328292 34328361 -216359493 + (TA)n Simple_repeat Simple_repeat 2 71 0 2244 130 0 0 chr2 34329011 34329318 -216358536 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr2 34329380 34329401 -216358453 + AT_rich Low_complexity Low_complexity 1 21 0 1126 148 72 55 chr2 34330096 34330333 -216357521 + L1MB7 LINE L1 5943 6183 -1 309 336 89 7 chr2 34331119 34331265 -216356589 - MIR3 SINE MIR -48 160 3 2244 75 3 0 chr2 34331945 34332227 -216355627 - AluY SINE Alu -28 283 1 21 36 0 0 chr2 34332230 34332258 -216355596 + AT_rich Low_complexity Low_complexity 1 28 0 665 184 0 0 chr2 34332273 34332382 -216355472 - FLAM_A SINE Alu -32 110 2 2138 125 0 0 chr2 34332612 34332908 -216354946 - AluSx SINE Alu -16 296 1 230 282 134 74 chr2 34333196 34333345 -216354509 + L3 LINE CR1 922 1079 -498 464 270 79 42 chr2 34333487 34333728 -216354126 + MIR SINE MIR 13 262 0 204 135 0 27 chr2 34334535 34334572 -216353282 + (TG)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 34334916 34334949 -216352905 + AT_rich Low_complexity Low_complexity 1 33 0 722 193 0 8 chr2 34334951 34335070 -216352784 - AluJb SINE Alu -194 118 1 2077 130 7 0 chr2 34335457 34335749 -216352105 - AluSx SINE Alu -18 294 1 187 357 132 41 chr2 34336282 34336460 -216351394 - L2 LINE L2 -13 3300 3139 1530 185 6 46 chr2 34336460 34336784 -216351070 + AluJo SINE Alu 1 311 -1 2067 125 0 29 chr2 34336788 34337099 -216350755 + AluSq SINE Alu 1 302 -11 187 357 132 41 chr2 34337099 34337181 -216350673 - L2 LINE L2 -176 3137 3011 380 248 68 53 chr2 34337266 34337472 -216350382 + L1ME LINE L1 4567 4775 -1371 924 171 0 13 chr2 34337655 34337813 -216350041 - FRAM SINE Alu -10 166 11 23 0 0 0 chr2 34337961 34337984 -216349870 + AT_rich Low_complexity Low_complexity 1 23 0 492 272 168 8 chr2 34338078 34338393 -216349461 + L1ME LINE L1 5326 5689 -432 221 167 0 24 chr2 34338401 34338443 -216349411 + (TATG)n Simple_repeat Simple_repeat 3 43 0 237 33 0 0 chr2 34339135 34339165 -216348689 + (GA)n Simple_repeat Simple_repeat 1 30 0 485 16 16 0 chr2 34339175 34339237 -216348617 + (CA)n Simple_repeat Simple_repeat 2 64 0 189 0 0 0 chr2 34339236 34339257 -216348597 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 246 317 54 2 chr2 34340059 34340169 -216347685 + MIR SINE MIR 17 130 -78 2288 112 3 10 chr2 34340191 34340505 -216347349 - AluSx SINE Alu 0 312 1 1747 141 12 56 chr2 34341685 34342005 -216345849 + AluSg SINE Alu 1 306 -4 203 349 73 18 chr2 34342596 34342705 -216345149 - L2 LINE L2 -20 3252 3138 787 274 12 35 chr2 34342813 34343068 -216344786 + MIR SINE MIR 8 256 -6 207 352 38 19 chr2 34343154 34343259 -216344595 - L2 LINE L2 -223 3049 2943 336 210 0 0 chr2 34343637 34343699 -216344155 - L2 LINE L2 -2 3311 3250 601 225 46 26 chr2 34344232 34344383 -216343471 - Charlie8 DNA MER1_type -2244 173 20 540 280 13 7 chr2 34344816 34344966 -216342888 + MIR SINE MIR 53 203 -59 236 324 0 28 chr2 34345725 34345796 -216342058 - L2 LINE L2 -41 3231 3163 216 0 0 0 chr2 34346003 34346027 -216341827 + (A)n Simple_repeat Simple_repeat 1 24 0 201 219 0 0 chr2 34346827 34346868 -216340986 - MIR3 SINE MIR -6 202 162 2265 76 24 3 chr2 34347149 34347437 -216340417 - AluY SINE Alu -17 294 1 233 290 58 0 chr2 34348380 34348449 -216339405 - L2 LINE L2 -18 3254 3182 431 234 88 22 chr2 34349911 34350048 -216337806 + MIR3 SINE MIR 3 148 -60 21 36 0 0 chr2 34350216 34350244 -216337610 + GC_rich Low_complexity Low_complexity 1 28 0 368 347 60 28 chr2 34350366 34350617 -216337237 + L2 LINE L2 1310 1568 -1746 2509 70 0 13 chr2 34350660 34350975 -216336879 - AluY SINE Alu 0 311 1 209 316 33 72 chr2 34352198 34352295 -216335559 + MER5B DNA MER1_type 26 116 -62 2065 87 42 11 chr2 34352295 34352581 -216335273 - AluSc SINE Alu -14 295 1 209 316 33 72 chr2 34352581 34352635 -216335219 + MER5B DNA MER1_type 116 171 -7 2054 99 67 3 chr2 34353431 34353714 -216334140 + AluSc SINE Alu 1 301 -8 1744 151 3 32 chr2 34353714 34353998 -216333856 - AluJo SINE Alu -35 277 1 312 294 159 32 chr2 34354846 34354972 -216332882 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34356704 34356990 -216330864 + AluJb SINE Alu 1 312 0 2183 106 7 0 chr2 34357174 34357467 -216330387 - AluY SINE Alu -16 295 1 1398 232 304 8 chr2 34357773 34358372 -216329482 - LTR50 LTR ERVL -2 793 18 834 259 141 70 chr2 34358754 34359272 -216328582 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34360048 34360349 -216327505 + AluSx SINE Alu 1 301 -11 2072 173 49 0 chr2 34360913 34361259 -216326595 + MLT1A1 LTR MaLR 3 365 0 2007 123 3 35 chr2 34361298 34361616 -216326238 + AluSg SINE Alu 1 308 -2 2110 78 7 11 chr2 34361621 34361949 -216325905 + AluY SINE Alu 1 327 0 377 213 147 20 chr2 34362122 34362272 -216325582 + MIR SINE MIR 21 189 -73 25 0 0 0 chr2 34362387 34362412 -216325442 + AT_rich Low_complexity Low_complexity 1 25 0 699 225 91 14 chr2 34362616 34362794 -216325060 - MIR3 SINE MIR -6 202 11 312 183 12 37 chr2 34364024 34364106 -216323748 - L2 LINE L2 -1036 2278 2199 406 269 60 30 chr2 34364122 34364256 -216323598 - MER5A DNA MER1_type -2 187 50 535 207 241 0 chr2 34364551 34364696 -216323158 - MER5A DNA MER1_type 0 189 10 341 309 108 7 chr2 34364735 34364874 -216322980 - MIR SINE MIR -3 259 107 2223 65 33 0 chr2 34366111 34366387 -216321467 - AluY SINE Alu -26 285 1 7814 123 38 11 chr2 34366440 34367638 -216320216 + Tigger3b DNA MER2_type 1 1231 0 261 161 161 81 chr2 34367726 34367813 -216320041 - L2 LINE L2 0 3313 3220 2303 97 3 0 chr2 34369296 34369594 -216318260 - AluSg SINE Alu -11 299 1 793 178 81 6 chr2 34369678 34369852 -216318002 + MER53 DNA DNA 3 189 0 1820 152 0 71 chr2 34370999 34371335 -216316519 - AluJb SINE Alu 0 312 1 691 292 21 10 chr2 34371549 34371741 -216316113 - MIR SINE MIR -13 249 56 398 373 7 13 chr2 34372200 34372350 -216315504 - L2 LINE L2 -1 3271 3123 752 232 36 85 chr2 34372662 34372968 -216314886 + L2 LINE L2 3022 3312 -1 227 387 8 16 chr2 34375267 34375391 -216312463 + L3 LINE CR1 1450 1572 -5 214 308 0 0 chr2 34375856 34375908 -216311946 - L2 LINE L2 0 3313 3262 297 346 79 0 chr2 34376174 34376301 -216311553 - L2 LINE L2 -463 2851 2715 2108 119 7 3 chr2 34376310 34376603 -216311251 - AluSx SINE Alu -18 294 1 452 352 73 29 chr2 34377011 34377392 -216310462 + L2 LINE L2 1281 1678 -1636 875 278 51 42 chr2 34377479 34377896 -216309958 + L2 LINE L2 2300 2723 -591 1987 125 3 0 chr2 34377896 34378184 -216309670 + AluSx SINE Alu 1 289 -23 1984 126 7 0 chr2 34378329 34378606 -216309248 - AluSx SINE Alu -33 279 1 473 313 51 20 chr2 34379187 34379382 -216308472 - MIR SINE MIR -12 250 50 2364 75 14 0 chr2 34380124 34380418 -216307436 + AluSp SINE Alu 6 303 -10 342 169 0 0 chr2 34380523 34380588 -216307266 + (ATGGTG)n Simple_repeat Simple_repeat 4 68 0 26 0 0 0 chr2 34381800 34381826 -216306028 + AT_rich Low_complexity Low_complexity 1 26 0 192 204 56 0 chr2 34382418 34382472 -216305382 + MIR SINE MIR 102 158 -104 2151 109 0 52 chr2 34382903 34383232 -216304622 + AluSx SINE Alu 1 312 0 349 239 65 28 chr2 34384061 34384188 -216303666 + MIR SINE MIR 4 135 -73 3267 171 52 3 chr2 34384189 34384761 -216303093 + L1MB7 LINE L1 5524 6123 -61 2376 77 3 0 chr2 34384761 34385060 -216302794 - AluSg SINE Alu -6 304 5 347 252 79 36 chr2 34385507 34385646 -216302208 + MIR SINE MIR 118 262 0 184 349 23 12 chr2 34385714 34385800 -216302054 + MIR3 SINE MIR 118 204 -4 342 0 0 0 chr2 34387664 34387702 -216300152 + (CA)n Simple_repeat Simple_repeat 2 39 0 2766 124 43 24 chr2 34388850 34389108 -216298746 - MSTA LTR MaLR 0 428 157 1544 103 158 48 chr2 34389108 34389381 -216298473 + AluSg1 SINE Alu 1 303 -6 2766 124 43 24 chr2 34389381 34389542 -216298312 - MSTA LTR MaLR -271 157 1 2364 148 0 20 chr2 34389553 34389897 -216297957 + MER1B DNA MER1_type 1 337 0 280 275 132 57 chr2 34390078 34390310 -216297544 + L2 LINE L2 1473 1686 -1628 2264 68 0 68 chr2 34390310 34390631 -216297223 - AluY SINE Alu -12 299 1 280 275 132 57 chr2 34390631 34390801 -216297053 + L2 LINE L2 1686 1905 -1409 311 48 0 0 chr2 34390823 34390865 -216296989 - AluSc SINE Alu -3 296 255 1192 89 6 0 chr2 34390869 34391026 -216296828 - AluSg SINE Alu -142 168 11 227 325 102 64 chr2 34391424 34391581 -216296273 + L2 LINE L2 3110 3272 0 244 303 26 57 chr2 34391708 34391936 -216295918 + L1ME4a LINE L1 2785 3005 -3141 1456 190 0 22 chr2 34392229 34392503 -216295351 + AluJo SINE Alu 1 268 -44 334 273 89 94 chr2 34392514 34393032 -216294822 + L1ME4a LINE L1 3894 4413 -1733 2555 57 0 0 chr2 34393032 34393330 -216294524 + AluY SINE Alu 1 298 -13 334 273 89 94 chr2 34393330 34393945 -216293909 + L1ME4a LINE L1 4413 5021 -1125 2130 116 3 3 chr2 34393956 34394248 -216293606 + AluSx SINE Alu 7 298 -14 1246 273 80 25 chr2 34394538 34395011 -216292843 + L1ME4a LINE L1 5331 5844 -277 2307 92 0 3 chr2 34395011 34395304 -216292550 + AluSc SINE Alu 1 292 -17 1246 273 80 25 chr2 34395304 34395419 -216292435 + L1ME4a LINE L1 5844 5951 -170 609 14 0 0 chr2 34395660 34395730 -216292124 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 374 280 173 7 chr2 34396687 34396837 -216291017 - MIR SINE MIR -69 193 19 370 111 0 0 chr2 34396924 34396978 -216290876 - Tigger1 DNA MER2_type -107 2311 2258 * 5635 104 14 54 chr2 34396976 34397017 -216290837 - Tigger1 DNA MER2_type -700 1718 1677 2219 114 0 0 chr2 34397017 34397314 -216290540 - AluSq SINE Alu -16 297 1 5635 104 14 54 chr2 34397314 34398158 -216289696 - Tigger1 DNA MER2_type -741 1677 869 808 142 0 0 chr2 34398175 34398295 -216289559 - FRAM SINE Alu -17 159 40 4330 124 29 75 chr2 34398295 34398940 -216288914 - Tigger1 DNA MER2_type -1538 880 206 1450 191 25 14 chr2 34398940 34399218 -216288636 + AluJb SINE Alu 1 281 -31 4330 124 29 75 chr2 34399218 34399291 -216288563 - Tigger1 DNA MER2_type -2212 206 131 1932 142 0 4 chr2 34399291 34399572 -216288282 + AluSx SINE Alu 1 280 -32 252 0 0 0 chr2 34399572 34399600 -216288254 + (TAA)n Simple_repeat Simple_repeat 1 28 0 4330 124 29 75 chr2 34399600 34399647 -216288207 - Tigger1 DNA MER2_type -2221 197 149 2139 168 27 37 chr2 34400061 34400530 -216287324 + MER31A LTR ERV1 4 469 -16 957 96 44 0 chr2 34400530 34400665 -216287189 - L1PA12 LINE L1 0 6168 6028 2139 168 27 37 chr2 34400665 34400682 -216287172 + MER31A LTR ERV1 469 485 0 847 296 105 19 chr2 34400725 34401039 -216286815 - L3 LINE CR1 -102 1475 1135 654 233 47 35 chr2 34401916 34402088 -216285766 + MER5B DNA MER1_type 4 177 -1 243 0 0 0 chr2 34402492 34402519 -216285335 + (TC)n Simple_repeat Simple_repeat 2 28 0 1753 161 11 14 chr2 34402519 34402805 -216285049 - AluJo SINE Alu -21 291 7 1734 182 106 34 chr2 34403105 34403440 -216284414 - LTR8A LTR ERV1 -2 725 355 2093 123 3 37 chr2 34403440 34403764 -216284090 + AluSp SINE Alu 1 313 0 1734 182 106 34 chr2 34403764 34403835 -216284019 - LTR8A LTR ERV1 -372 355 290 2246 122 0 13 chr2 34403965 34404277 -216283577 - AluJo SINE Alu -4 308 1 988 119 0 0 chr2 34404832 34404958 -216282896 - FLAM_C SINE Alu -7 126 1 1904 238 69 30 chr2 34405338 34405829 -216282025 + L1M4b LINE L1 11 520 -6339 1033 179 49 0 chr2 34405829 34406013 -216281841 + THE1B LTR MaLR 1 193 -171 * 1140 165 15 92 chr2 34406008 34406268 -216281586 - MER65A LTR ERV1 -204 241 2 2061 259 42 55 chr2 34406268 34406937 -216280917 + L1M4b LINE L1 1412 2088 -4871 2220 153 0 61 chr2 34406937 34407296 -216280558 - MER1B DNA MER1_type 0 337 1 2061 259 42 55 chr2 34407296 34407455 -216280399 + L1M4b LINE L1 2088 2248 -4711 2256 86 0 14 chr2 34407455 34407784 -216280070 + AluSp SINE Alu 1 325 0 2061 259 42 55 chr2 34407784 34407970 -216279884 + L1M4b LINE L1 2248 2415 -4544 1079 253 53 61 chr2 34408129 34408438 -216279416 + L1M4b LINE L1 2473 2783 -4355 2112 149 131 18 chr2 34408438 34408828 -216279026 + Tigger2a DNA MER2_type 1 434 0 1079 253 53 61 chr2 34408828 34409221 -216278633 + L1M4b LINE L1 2783 3169 -3969 1953 134 7 7 chr2 34409233 34409566 -216278288 + AluSx SINE Alu 1 333 0 599 249 80 50 chr2 34409593 34409969 -216277885 + MER21B LTR ERV1 348 806 -57 2263 249 52 30 chr2 34410013 34410456 -216277398 + L1M4b LINE L1 3344 3776 -3181 2602 160 113 66 chr2 34410456 34410859 -216276995 - LTR29 LTR ERV1 0 622 239 180 0 0 0 chr2 34410859 34410879 -216276975 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1617 194 0 7 chr2 34410884 34411162 -216276692 - AluJo SINE Alu -36 276 1 2602 160 113 66 chr2 34411162 34411346 -216276508 - LTR29 LTR ERV1 -386 236 1 2263 249 52 30 chr2 34411346 34411436 -216276418 + L1M4b LINE L1 3776 3863 -3094 2329 105 0 10 chr2 34411436 34411749 -216276105 + AluSx SINE Alu 1 310 -2 2263 249 52 30 chr2 34411749 34412061 -216275793 + L1M4b LINE L1 3863 4209 -2748 717 131 10 0 chr2 34412082 34412181 -216275673 - FLAM_C SINE Alu -18 125 26 1802 112 0 0 chr2 34412214 34412455 -216275399 + AluSq SINE Alu 1 241 -72 227 225 110 75 chr2 34412473 34412646 -216275208 - LTR16A1 LTR ERVL -219 238 60 316 308 30 15 chr2 34412728 34412861 -216274993 - MIR SINE MIR -28 234 100 2101 134 0 3 chr2 34412882 34413180 -216274674 + AluSx SINE Alu 1 297 -15 232 170 38 0 chr2 34413484 34413537 -216274317 + AluSq SINE Alu 247 301 -1 893 252 62 0 chr2 34413689 34413947 -216273907 - MLT1L LTR MaLR -72 543 270 216 396 0 0 chr2 34414473 34414637 -216273217 + (CCA)n Simple_repeat Simple_repeat 3 166 0 834 266 95 4 chr2 34415310 34415573 -216272281 - MLT1L LTR MaLR -326 289 3 1549 189 47 39 chr2 34416541 34416604 -216271250 + MLT1A1 LTR MaLR 3 64 -301 2182 132 3 0 chr2 34416604 34416915 -216270939 + AluSx SINE Alu 1 312 0 1549 189 47 39 chr2 34416915 34417211 -216270643 + MLT1A1 LTR MaLR 64 365 0 361 68 0 0 chr2 34418409 34418453 -216269401 + MER57B LTR ERV1 326 369 -65 195 224 75 30 chr2 34418720 34418787 -216269067 - L2 LINE L2 -100 3213 3144 762 211 8 0 chr2 34419423 34419556 -216268298 + AluJo SINE Alu 3 136 -176 421 144 22 0 chr2 34419664 34419754 -216268100 + GA-rich Low_complexity Low_complexity 3 94 0 470 106 0 0 chr2 34419767 34419833 -216268021 + L1MB4 LINE L1 5863 5928 -252 701 168 8 8 chr2 34419848 34419967 -216267887 - FLAM_A SINE Alu -3 139 21 271 207 19 67 chr2 34419993 34420119 -216267735 + MLT2B2 LTR ERVL 260 474 -41 255 103 0 0 chr2 34420119 34420158 -216267696 + (CA)n Simple_repeat Simple_repeat 2 40 0 271 207 19 67 chr2 34420158 34420199 -216267655 + MLT2B2 LTR ERVL 474 515 0 1507 156 12 8 chr2 34420199 34420456 -216267398 + L1MB3 LINE L1 5925 6182 -1 389 272 34 7 chr2 34420519 34420666 -216267188 + HAL1 LINE L1 1312 1462 -1045 3294 142 19 0 chr2 34420797 34421361 -216266493 + L1 LINE L1 4072 4646 -1500 256 310 124 16 chr2 34421599 34421728 -216266126 + MIR3 SINE MIR 18 160 -48 2289 136 91 18 chr2 34422016 34422413 -216265441 - MSTA LTR MaLR -2 426 1 2320 112 0 0 chr2 34423836 34424140 -216263714 + AluSx SINE Alu 1 304 -8 390 264 145 68 chr2 34424613 34425116 -216262738 + MER34 LTR ERV1 1 542 0 23 33 0 0 chr2 34425293 34425323 -216262531 + AT_rich Low_complexity Low_complexity 1 30 0 1080 224 53 99 chr2 34426841 34427346 -216260508 - MER34 LTR ERV1 0 542 61 282 109 22 43 chr2 34427334 34427399 -216260455 + Alu SINE Alu 242 301 0 * 927 268 53 0 chr2 34427518 34427764 -216260090 - MIR SINE MIR 0 262 4 218 250 0 0 chr2 34427930 34427978 -216259876 - MIR SINE MIR -10 252 205 894 239 42 78 chr2 34427985 34428200 -216259654 + L1ME LINE L1 5384 5584 -580 1624 167 47 23 chr2 34428200 34428499 -216259355 + AluJo SINE Alu 1 306 -6 894 239 42 78 chr2 34428499 34428618 -216259236 + L1ME LINE L1 5584 5706 -458 * 1455 191 56 14 chr2 34428607 34428962 -216258892 - L1ME3A LINE L1 -12 6158 5789 580 314 68 48 chr2 34428971 34429325 -216258529 + HERVL LTR ERVL 1882 2242 -3412 21 0 0 0 chr2 34429545 34429566 -216258288 + AT_rich Low_complexity Low_complexity 1 21 0 2298 91 13 0 chr2 34429575 34429882 -216257972 - AluSq SINE Alu -2 311 1 1266 195 56 28 chr2 34429888 34430175 -216257679 - AluJo SINE Alu -17 295 1 2374 81 0 0 chr2 34430283 34430580 -216257274 - AluY SINE Alu -14 297 1 379 319 117 50 chr2 34431146 34431309 -216256545 + L2 LINE L2 2098 2249 -1065 1876 161 17 0 chr2 34431309 34431601 -216256253 - AluJb SINE Alu -15 297 1 379 319 117 50 chr2 34431601 34431813 -216256041 + L2 LINE L2 2249 2498 -816 2336 164 102 9 chr2 34432167 34432589 -216255265 + LOR1b LTR ERV1 1 461 0 2083 145 44 8 chr2 34433119 34433484 -216254370 + LTR24C LTR ERV1 1 378 -257 23734 141 56 70 chr2 34433499 34434165 -216253689 - LTR8A-int LTR ERV1 -102 6161 5487 5342 78 34 3 chr2 34434165 34434834 -216253020 + LTR8 LTR ERV1 2 691 0 23734 141 56 70 chr2 34434834 34440035 -216247819 - LTR8A-int LTR ERV1 -776 5487 1 2832 183 66 52 chr2 34440035 34440307 -216247547 - LTR8A LTR ERV1 0 727 460 5015 116 30 11 chr2 34440307 34441072 -216246782 + LTR17 LTR ERV1 1 780 0 2832 183 66 52 chr2 34441072 34441349 -216246505 - LTR8A LTR ERV1 -267 460 163 3716 100 47 4 chr2 34441349 34441839 -216246015 - MER9 LTR ERVK 0 511 1 2832 183 66 52 chr2 34441839 34442005 -216245849 - LTR8A LTR ERV1 -564 163 1 706 250 60 33 chr2 34442122 34442306 -216245548 + MER5A DNA MER1_type 1 189 0 549 171 96 20 chr2 34442357 34442503 -216245351 - MER105 DNA DNA -44 160 4 2847 118 52 64 chr2 34442553 34443169 -216244685 - MER4B LTR ERV1 0 779 1 3423 135 74 45 chr2 34443900 34444570 -216243284 + LTR8A LTR ERV1 1 691 0 1871 140 3 16 chr2 34444703 34445011 -216242843 + AluJb SINE Alu 1 304 -8 247 292 73 21 chr2 34445092 34445188 -216242666 + MER5A DNA MER1_type 88 188 -1 577 224 34 54 chr2 34445283 34445430 -216242424 + LTR8 LTR ERV1 1 144 -547 2648 51 0 0 chr2 34445580 34445891 -216241963 + AluY SINE Alu 1 311 0 262 253 46 23 chr2 34445966 34446053 -216241801 + LTR8A LTR ERV1 290 378 -349 579 251 86 38 chr2 34446084 34446351 -216241503 + LTR8A LTR ERV1 448 727 0 314 337 135 34 chr2 34446429 34446696 -216241158 - L2 LINE L2 -158 3114 2821 408 254 61 56 chr2 34446822 34447035 -216240819 - Charlie8 DNA MER1_type -2168 249 36 242 259 0 0 chr2 34447236 34447290 -216240564 + (TG)n Simple_repeat Simple_repeat 1 54 0 207 0 0 0 chr2 34447291 34447314 -216240540 + (TA)n Simple_repeat Simple_repeat 2 24 0 23 33 0 0 chr2 34447872 34447902 -216239952 + AT_rich Low_complexity Low_complexity 1 30 0 1723 195 107 19 chr2 34448109 34448540 -216239314 + MLT1D LTR MaLR 21 489 -16 22 0 0 0 chr2 34448594 34448616 -216239238 + AT_rich Low_complexity Low_complexity 1 22 0 1424 153 94 21 chr2 34448689 34448976 -216238878 + AluJb SINE Alu 1 308 -4 812 165 0 23 chr2 34449749 34449882 -216237972 - FLAM_C SINE Alu -13 130 1 480 263 19 39 chr2 34449971 34450127 -216237727 - L3 LINE CR1 -67 1510 1358 221 354 39 23 chr2 34450821 34450951 -216236903 + MIR SINE MIR 20 151 -111 2604 64 0 0 chr2 34451070 34451381 -216236473 + AluY SINE Alu 1 311 0 749 183 0 0 chr2 34454689 34454820 -216233034 - FLAM_A SINE Alu -2 131 1 256 224 0 0 chr2 34454841 34454890 -216232964 + L2 LINE L2 3265 3313 0 2374 83 0 3 chr2 34455122 34455423 -216232431 - AluY SINE Alu -11 300 1 26 0 0 0 chr2 34455612 34455638 -216232216 + AT_rich Low_complexity Low_complexity 1 26 0 289 173 8 38 chr2 34455829 34455957 -216231897 + AluJo SINE Alu 87 292 -10 180 0 0 0 chr2 34457306 34457326 -216230528 + (TG)n Simple_repeat Simple_repeat 2 21 0 342 273 23 0 chr2 34457328 34457416 -216230438 + L1MC4 LINE L1 6614 6703 -1339 291 54 0 0 chr2 34457419 34457456 -216230398 + (TG)n Simple_repeat Simple_repeat 2 38 0 1766 115 19 0 chr2 34457486 34457755 -216230099 - L1PA8A LINE L1 0 6131 5858 784 231 113 29 chr2 34457836 34458074 -216229780 - MIR SINE MIR -3 259 2 1868 161 3 3 chr2 34458612 34458911 -216228943 - AluSx SINE Alu -13 299 1 315 346 69 23 chr2 34458985 34459202 -216228652 - L2 LINE L2 -206 3066 2840 1529 204 13 23 chr2 34459364 34459668 -216228186 + AluJo SINE Alu 5 305 -7 981 176 11 0 chr2 34462112 34462288 -216225566 - MER58A DNA MER1_type 0 224 47 386 148 16 0 chr2 34464448 34464509 -216223345 - L2 LINE L2 0 3313 3252 251 203 0 0 chr2 34467060 34467119 -216220735 + (TGG)n Simple_repeat Simple_repeat 1 59 0 4555 105 3 5 chr2 34469340 34469998 -216217856 - L1PA14 LINE L1 -17 6144 5488 2258 103 7 0 chr2 34471253 34471563 -216216291 + AluSq SINE Alu 1 312 -1 204 182 146 18 chr2 34471572 34471627 -216216227 - L2 LINE L2 -5 3267 3206 183 336 157 21 chr2 34472184 34472419 -216215435 - L2 LINE L2 -1035 2279 2013 442 275 23 23 chr2 34472478 34472609 -216215245 - MIR SINE MIR -104 158 28 1003 172 92 44 chr2 34472802 34473029 -216214825 - MER8 DNA MER2_type -1 238 1 1530 151 40 4 chr2 34473262 34473514 -216214340 - AluJo SINE Alu -51 261 1 344 292 155 12 chr2 34474140 34474301 -216213553 + MIR SINE MIR 62 245 -17 1849 138 10 7 chr2 34474720 34475016 -216212838 - AluSc SINE Alu -12 297 1 1508 147 88 53 chr2 34475091 34475376 -216212478 + AluJo SINE Alu 1 295 -17 2159 106 16 0 chr2 34475379 34475682 -216212172 + AluSx SINE Alu 1 308 -4 227 180 60 0 chr2 34475799 34475849 -216212005 + Charlie2a DNA MER1_type 82 134 -2728 850 221 53 0 chr2 34475971 34476197 -216211657 + Charlie2a DNA MER1_type 733 970 -1892 183 311 95 0 chr2 34476464 34476538 -216211316 + MIR3 SINE MIR 6 86 -122 180 77 0 0 chr2 34476677 34476703 -216211151 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2310 96 0 0 chr2 34476706 34476998 -216210856 - AluSq SINE Alu -21 292 1 435 298 57 8 chr2 34477186 34477451 -216210403 - L1MC4a LINE L1 -1857 5951 5674 628 259 146 0 chr2 34477486 34477671 -216210183 + MIR SINE MIR 19 230 -32 540 290 94 47 chr2 34477725 34477937 -216209917 - L1MC4a LINE L1 -2154 5654 5415 1656 149 47 24 chr2 34477937 34478233 -216209621 - AluJb SINE Alu -9 303 1 540 290 94 47 chr2 34478233 34478403 -216209451 - L1MC4a LINE L1 -2393 5415 5254 854 326 96 49 chr2 34478887 34479547 -216208307 - L1MC4a LINE L1 -1404 4742 4033 1552 166 50 14 chr2 34479547 34479825 -216208029 + AluJb SINE Alu 5 292 -20 854 326 96 49 chr2 34479825 34480002 -216207852 - L1MC4a LINE L1 -2113 4033 3866 1391 111 43 5 chr2 34530069 34530276 -216157578 + AluSp SINE Alu 84 298 -15 2055 101 30 7 chr2 34530468 34530765 -216157089 + AluSg SINE Alu 1 304 -6 32 0 0 0 chr2 34531333 34531365 -216156489 + AT_rich Low_complexity Low_complexity 1 32 0 4165 133 25 2 chr2 34531456 34532085 -216155769 - L1PA15 LINE L1 -8 6157 5514 * 8045 24 1 9 chr2 34532084 34533751 -216154103 - L1PA4 LINE L1 0 6155 4488 860 143 0 8 chr2 34534025 34534151 -216153703 - FLAM_C SINE Alu -18 125 1 468 310 52 24 chr2 34535458 34535671 -216152183 + L2 LINE L2 411 629 -2685 22 0 0 0 chr2 34535692 34535714 -216152140 + AT_rich Low_complexity Low_complexity 1 22 0 2236 79 38 0 chr2 34535774 34536065 -216151789 + AluY SINE Alu 1 302 -9 1081 111 25 30 chr2 34536066 34536264 -216151590 + AluY SINE Alu 1 197 -114 4205 206 2 16 chr2 34536365 34537241 -216150613 - L1P LINE L1 -1158 4988 4125 2470 83 0 0 chr2 34537436 34537737 -216150117 + AluY SINE Alu 1 301 -10 235 260 110 45 chr2 34537741 34537895 -216149959 - L1ME3A LINE L1 -222 5948 5785 454 260 27 41 chr2 34538607 34538753 -216149101 + MIR SINE MIR 13 156 -106 2000 158 38 20 chr2 34538762 34539109 -216148745 + MLT1A1 LTR MaLR 2 354 -11 571 253 0 31 chr2 34539326 34539488 -216148366 + MER103 DNA DNA 8 164 -2 26 30 0 0 chr2 34539810 34539843 -216148011 + AT_rich Low_complexity Low_complexity 1 33 0 324 103 0 0 chr2 34540781 34540839 -216147015 + (TC)n Simple_repeat Simple_repeat 1 58 0 2756 101 25 3 chr2 34542198 34542565 -216145289 + THE1C LTR MaLR 1 375 0 947 223 167 37 chr2 34543086 34543409 -216144445 - MLT1A1 LTR MaLR 0 365 1 271 303 18 115 chr2 34543556 34543721 -216144133 - MIR3 SINE MIR -51 157 9 334 308 75 8 chr2 34544342 34544475 -216143379 - MIR SINE MIR -28 234 93 243 115 7 79 chr2 34545200 34545339 -216142515 + (CCCCCA)n Simple_repeat Simple_repeat 4 132 0 331 270 127 0 chr2 34546040 34546166 -216141688 - MIR SINE MIR -3 259 118 2085 125 0 10 chr2 34546246 34546543 -216141311 + AluSx SINE Alu 1 294 -18 192 214 20 122 chr2 34547280 34547378 -216140476 + MIR SINE MIR 123 210 -52 2180 125 0 3 chr2 34547512 34547824 -216140030 + AluSx SINE Alu 1 311 -1 22 80 0 0 chr2 34547970 34548020 -216139834 + AT_rich Low_complexity Low_complexity 1 50 0 269 221 48 55 chr2 34548169 34548286 -216139568 - L1ME LINE L1 -318 5844 5724 448 190 90 0 chr2 34548614 34548714 -216139140 + MER53 DNA DNA 1 109 -80 520 117 43 32 chr2 34548800 34548894 -216138960 + MER53 DNA DNA 95 189 0 2119 116 7 13 chr2 34549043 34549346 -216138508 + AluSq SINE Alu 1 301 -12 853 178 0 0 chr2 34549400 34549529 -216138325 + FLAM_C SINE Alu 5 133 0 2210 129 3 0 chr2 34549564 34549875 -216137979 + AluSx SINE Alu 1 312 0 192 40 0 0 chr2 34550005 34550030 -216137824 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2179 94 35 0 chr2 34550068 34550355 -216137499 + AluY SINE Alu 1 297 -14 183 200 89 0 chr2 34550415 34550460 -216137394 - MIR SINE MIR -131 131 83 1518 154 4 4 chr2 34550526 34550772 -216137082 - Tigger5 DNA MER2_type 0 2323 2078 240 216 59 0 chr2 34550762 34550813 -216137041 - Tigger5 DNA MER2_type -2244 79 26 * 321 348 50 7 chr2 34551505 34551646 -216136208 + L3 LINE CR1 1429 1575 -2 241 83 0 0 chr2 34551994 34552030 -216135824 - Alu SINE Alu -4 298 263 1091 100 13 7 chr2 34552031 34552181 -216135673 - AluSq/x SINE Alu -161 151 1 4323 109 225 3 chr2 34552707 34553383 -216134471 + LTR12 LTR ERV1 1 826 0 1899 120 0 4 chr2 34553383 34553649 -216134205 + AluSq SINE Alu 31 295 -18 2154 95 3 0 chr2 34554196 34554481 -216133373 + AluY SINE Alu 1 286 -25 1350 273 111 21 chr2 34554559 34555339 -216132515 - L1MC4a LINE L1 -1 6120 5280 282 312 58 0 chr2 34555761 34555915 -216131939 - L1MC4a LINE L1 -1302 4844 4682 311 258 69 38 chr2 34556028 34556187 -216131667 - L1ME LINE L1 -395 5709 5546 1201 231 45 132 chr2 34556223 34556867 -216130987 - MLT1E LTR MaLR -4 589 2 2288 70 37 13 chr2 34557029 34557328 -216130526 - AluY SINE Alu -3 308 3 251 224 121 0 chr2 34557980 34558038 -216129816 + MIR SINE MIR 82 146 -116 416 329 30 6 chr2 34558159 34558323 -216129531 - L3 LINE CR1 -159 1418 1251 330 384 82 25 chr2 34558959 34559396 -216128458 - L2 LINE L2 -5 3267 2806 725 307 110 49 chr2 34559793 34560301 -216127553 - MLT1K LTR MaLR -37 551 13 2396 76 3 7 chr2 34560927 34561229 -216126625 + AluY SINE Alu 1 301 -10 2022 154 7 0 chr2 34561494 34561800 -216126054 - AluSx SINE Alu -4 308 1 245 174 252 0 chr2 34562035 34562150 -216125704 - L1M LINE L1 -770 5408 5265 487 301 48 60 chr2 34562171 34562653 -216125201 - L1ME LINE L1 -937 5192 4717 1599 258 141 36 chr2 34562677 34562971 -216124883 - L1MC4 LINE L1 -116 7926 7664 2369 86 0 7 chr2 34562971 34563274 -216124580 - AluSc SINE Alu -8 301 1 1599 258 141 36 chr2 34563274 34563354 -216124500 - L1MC4 LINE L1 -378 7664 7594 2297 91 7 0 chr2 34563354 34563641 -216124213 - AluSc SINE Alu -20 289 1 1599 258 141 36 chr2 34563641 34563983 -216123871 - L1MC4 LINE L1 -448 7594 7134 526 301 156 43 chr2 34564056 34564852 -216123002 - L1ME LINE L1 -5232 887 2 1527 40 0 0 chr2 34565075 34565248 -216122606 + L1PA4 LINE L1 5979 6151 -4 197 132 26 0 chr2 34565450 34565488 -216122366 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 1864 115 80 3 chr2 34566075 34566362 -216121492 + AluSc SINE Alu 1 309 0 21 0 0 0 chr2 34566807 34566828 -216121026 + AT_rich Low_complexity Low_complexity 1 21 0 845 193 60 0 chr2 34568155 34568321 -216119533 - AluJo SINE Alu 0 312 137 207 314 0 0 chr2 34568330 34568381 -216119473 - MIR SINE MIR -119 143 93 216 276 66 79 chr2 34569087 34569239 -216118615 + L2 LINE L2 3164 3313 0 331 224 111 105 chr2 34569711 34569984 -216117870 - L1ME4a LINE L1 0 6121 5838 2245 91 0 3 chr2 34569984 34570294 -216117560 - AluSq SINE Alu 0 309 1 331 224 111 105 chr2 34570294 34570515 -216117339 - L1ME4a LINE L1 -283 5838 5620 1696 191 19 41 chr2 34570642 34571008 -216116846 - MSTD LTR MaLR 0 396 39 227 130 0 22 chr2 34571008 34571054 -216116800 + (TTCC)n Simple_repeat Simple_repeat 3 47 0 183 156 0 0 chr2 34571060 34571092 -216116762 + C-rich Low_complexity Low_complexity 2 33 0 1730 159 32 44 chr2 34571092 34571407 -216116447 - AluJo SINE Alu -1 311 1 263 122 102 0 chr2 34571407 34571456 -216116398 - MSTD LTR MaLR -373 55 2 1271 166 11 42 chr2 34571546 34571638 -216116216 + L1MA4 LINE L1 6021 6114 -186 2477 128 90 3 chr2 34571638 34572028 -216115826 - MSTA LTR MaLR -4 424 1 1271 166 11 42 chr2 34572028 34572219 -216115635 + L1MA4 LINE L1 6114 6295 -5 1929 230 132 54 chr2 34572568 34573184 -216114670 - L1MC4 LINE L1 -103 7705 7138 748 175 15 44 chr2 34573184 34573321 -216114533 - AluJo SINE Alu -169 133 1 1929 230 132 54 chr2 34573321 34573745 -216114109 - L1MC4 LINE L1 -670 7138 6748 234 62 0 0 chr2 34573745 34573777 -216114077 + (CA)n Simple_repeat Simple_repeat 2 33 0 1929 230 132 54 chr2 34573777 34573824 -216114030 - L1MC4 LINE L1 -1060 6748 6706 2608 33 3 0 chr2 34573824 34574127 -216113727 + AluY SINE Alu 8 311 0 1929 230 132 54 chr2 34574127 34574138 -216113716 - L1MC4 LINE L1 -1102 6706 6697 2307 103 0 0 chr2 34574138 34574440 -216113414 + AluSc SINE Alu 1 302 -7 1929 230 132 54 chr2 34574440 34574540 -216113314 - L1MC4 LINE L1 -1111 6697 6606 2346 76 0 52 chr2 34574540 34574868 -216112986 - AluY SINE Alu 0 311 1 1929 230 132 54 chr2 34574868 34574943 -216112911 - L1MC4 LINE L1 -1202 6606 6441 207 319 24 18 chr2 34575742 34575908 -216111946 - L2 LINE L2 -1210 2104 1938 490 303 44 26 chr2 34575949 34576166 -216111688 - MIR SINE MIR -14 248 20 276 323 71 0 chr2 34576237 34576336 -216111518 + L3 LINE CR1 1415 1520 -57 508 113 0 0 chr2 34576450 34576521 -216111333 - AluJ/FRAM SINE Alu -9 303 233 2165 101 0 66 chr2 34576710 34577028 -216110826 - AluSq SINE Alu -16 297 1 265 360 50 0 chr2 34577668 34577768 -216110086 + L2 LINE L2 3151 3255 -17 22 0 0 0 chr2 34577959 34577981 -216109873 + AT_rich Low_complexity Low_complexity 1 22 0 2153 88 7 20 chr2 34578042 34578339 -216109515 + AluSp SINE Alu 15 307 -6 1914 127 0 20 chr2 34579265 34579565 -216108289 - AluY SINE Alu -16 295 2 1913 148 3 10 chr2 34581107 34581418 -216106436 + AluSx SINE Alu 1 309 -3 226 375 48 0 chr2 34581695 34581799 -216106055 - L2 LINE L2 -13 3259 3151 2229 112 0 0 chr2 34581890 34582185 -216105669 + AluSg SINE Alu 14 308 -2 195 274 110 0 chr2 34582299 34582372 -216105482 + MIR SINE MIR 138 218 -44 21 0 0 0 chr2 34582931 34582952 -216104902 + AT_rich Low_complexity Low_complexity 1 21 0 258 231 0 0 chr2 34583205 34583257 -216104597 + LTR30 LTR ERV1 1 52 -670 1850 137 39 152 chr2 34583257 34583739 -216104115 + LTR12 LTR ERV1 53 480 -234 207 321 83 0 chr2 34583743 34583852 -216104002 + MIR SINE MIR 144 261 -1 2498 66 0 3 chr2 34585018 34585322 -216102532 + AluY SINE Alu 1 303 -8 872 90 0 0 chr2 34585423 34585534 -216102320 + AluSg/x SINE Alu 198 308 -4 225 0 0 0 chr2 34585768 34585793 -216102061 + (T)n Simple_repeat Simple_repeat 1 25 0 216 0 0 0 chr2 34586024 34586048 -216101806 + (A)n Simple_repeat Simple_repeat 1 24 0 1317 159 34 29 chr2 34586285 34586524 -216101330 - AluJo SINE Alu -6 306 67 4191 87 14 35 chr2 34587575 34587750 -216100104 + MER41A LTR ERV1 1 178 -376 2293 85 14 3 chr2 34587750 34588043 -216099811 + AluSq SINE Alu 1 296 -17 4191 87 14 35 chr2 34588043 34588264 -216099590 + MER41A LTR ERV1 178 384 -170 2567 59 0 0 chr2 34588264 34588568 -216099286 + AluYa5 SINE Alu 1 304 -7 4191 87 14 35 chr2 34588568 34588736 -216099118 + MER41A LTR ERV1 384 554 0 1747 201 124 22 chr2 34588777 34589229 -216098625 + MLT1D LTR MaLR 8 505 0 1599 150 41 17 chr2 34589562 34589856 -216097998 + AluJo SINE Alu 1 301 -11 1553 141 54 71 chr2 34590107 34590313 -216097541 + L1MA8 LINE L1 5929 6137 -154 2385 84 0 3 chr2 34590313 34590609 -216097245 - AluY SINE Alu -16 295 1 1553 141 54 71 chr2 34590609 34590667 -216097187 + L1MA8 LINE L1 6137 6194 -97 2146 207 52 7 chr2 34590667 34591107 -216096747 - LOR1b LTR ERV1 0 461 2 1553 141 54 71 chr2 34591107 34591209 -216096645 + L1MA8 LINE L1 6194 6290 -1 1525 192 39 51 chr2 34591232 34591644 -216096210 + MLT1C LTR MaLR 53 459 -8 2188 132 0 0 chr2 34591681 34591991 -216095863 - AluSx SINE Alu -2 310 1 571 230 121 24 chr2 34592104 34592352 -216095502 - L1MEc LINE L1 -4032 2364 2093 607 211 7 7 chr2 34592352 34592504 -216095350 + (TA)n Simple_repeat Simple_repeat 1 152 0 479 280 21 69 chr2 34592521 34592710 -216095144 - AluYb8 SINE Alu -60 258 79 2013 126 0 0 chr2 34593020 34593297 -216094557 - AluSx SINE Alu -35 277 1 606 230 117 20 chr2 34593410 34593658 -216094196 - L1MEc LINE L1 -4032 2575 2304 321 311 0 0 chr2 34593685 34593775 -216094079 + L1MC4 LINE L1 6614 6703 -1339 2383 78 0 29 chr2 34593782 34594089 -216093765 - AluY SINE Alu -13 298 1 395 280 116 18 chr2 34594093 34594339 -216093515 - L1MEc LINE L1 -4181 2287 2043 329 270 45 0 chr2 34594575 34594664 -216093190 + MIR3 SINE MIR 106 198 -10 928 229 92 4 chr2 34595567 34595794 -216092060 + MER58 DNA MER1_type 1 247 -2173 1779 145 0 25 chr2 34596538 34596820 -216091034 - AluJb SINE Alu -18 294 20 246 108 27 0 chr2 34596846 34596883 -216090971 - MSTB1 LTR MaLR 0 432 395 2060 125 0 3 chr2 34596884 34597171 -216090683 + AluSx SINE Alu 1 286 -26 313 322 0 0 chr2 34597182 34597272 -216090582 - L1MC4 LINE L1 -1339 6703 6614 * 318 304 0 0 chr2 34597195 34597287 -216090567 + L1MC4 LINE L1 6615 6706 -1336 2098 203 25 10 chr2 34597288 34597682 -216090172 - MSTB1 LTR MaLR -32 400 1 198 339 0 0 chr2 34598494 34598550 -216089304 + MIR SINE MIR 13 68 -194 351 260 72 61 chr2 34598730 34598911 -216088943 + MLT1J1 LTR MaLR 264 446 0 350 366 68 26 chr2 34599424 34599615 -216088239 - MIR3 SINE MIR -4 204 6 210 250 0 0 chr2 34599787 34599827 -216088027 + MIR SINE MIR 217 256 -6 261 310 35 23 chr2 34600018 34600192 -216087662 + L1MEc LINE L1 348 523 -6198 454 268 24 18 chr2 34600296 34600460 -216087394 + L1MEc LINE L1 1828 1992 -4548 905 251 52 55 chr2 34600550 34600877 -216086977 + MER58B DNA MER1_type 1 326 -15 2627 92 5 24 chr2 34601090 34601472 -216086382 - THE1C LTR MaLR 0 375 1 776 238 6 6 chr2 34601502 34601670 -216086184 - MLT1A2 LTR MaLR -1 373 206 932 232 89 6 chr2 34601800 34602136 -216085718 + L1MEc LINE L1 3005 3368 -3172 6036 143 28 8 chr2 34602140 34603577 -216084277 + L1MA5A LINE L1 4823 6287 -10 32 43 0 0 chr2 34603577 34603623 -216084231 + AT_rich Low_complexity Low_complexity 1 46 0 600 180 19 115 chr2 34603623 34603748 -216084106 + L1MEc LINE L1 3358 3447 -3093 1252 56 0 0 chr2 34603748 34603909 -216083945 + L1PA4 LINE L1 5992 6152 -3 600 180 19 115 chr2 34603909 34604044 -216083810 + L1MEc LINE L1 3447 3593 -2947 368 190 24 0 chr2 34604104 34604200 -216083654 + L1MEc LINE L1 2133 2270 -3918 840 48 0 0 chr2 34604201 34604306 -216083548 + (GGAA)n Simple_repeat Simple_repeat 2 106 0 216 67 0 0 chr2 34604510 34604540 -216083314 + (GGGGA)n Simple_repeat Simple_repeat 2 31 0 1191 233 117 4 chr2 34604571 34605031 -216082823 + L1MEc LINE L1 2231 2742 -3404 25 51 0 0 chr2 34605031 34605070 -216082784 + AT_rich Low_complexity Low_complexity 1 39 0 2266 72 4 0 chr2 34607462 34607777 -216080077 - AluY SINE Alu 0 316 1 267 235 15 0 chr2 34607803 34607871 -216079983 + L1PA16 LINE L1 6077 6145 -21 186 43 0 0 chr2 34608889 34608912 -216078942 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 727 251 156 57 chr2 34609273 34609644 -216078210 - MLT1C LTR MaLR -59 408 1 270 208 0 0 chr2 34609935 34609988 -216077866 + L2 LINE L2 3261 3313 0 798 188 0 0 chr2 34610028 34610161 -216077693 + FLAM_A SINE Alu 1 133 0 2643 149 76 24 chr2 34610724 34611301 -216076553 + pTR5 LTR ERV1 738 1344 -1094 4835 103 12 120 chr2 34611317 34612239 -216075615 + LTR12 LTR ERV1 5 826 0 237 373 51 8 chr2 34612240 34612358 -216075496 - L2 LINE L2 -47 3225 3103 330 165 13 63 chr2 34615437 34615516 -216072338 + MLT1H LTR MaLR 55 129 -420 1922 164 9 21 chr2 34616203 34616538 -216071316 + MER2 DNA MER2_type 1 331 -14 413 292 139 5 chr2 34617248 34617457 -216070397 - L1ME4a LINE L1 -223 5898 5662 1857 206 28 47 chr2 34618636 34619106 -216068748 - MER65C LTR ERV1 0 461 1 490 348 44 45 chr2 34619106 34619864 -216067990 - MER65C-int LTR ERV1 0 6685 4209 10556 52 13 56 chr2 34619869 34621290 -216066564 + SVA Other Other 27 1386 0 234 0 0 0 chr2 34621596 34621622 -216066232 + (A)n Simple_repeat Simple_repeat 1 26 0 279 382 40 23 chr2 34622877 34623181 -216064673 - MER110-int LTR ERV1 -2094 2553 2245 1652 116 0 40 chr2 34623384 34623634 -216064220 + AluSp SINE Alu 1 240 -73 2107 113 34 0 chr2 34623634 34623926 -216063928 + AluSq SINE Alu 7 309 -4 691 138 121 0 chr2 34624605 34624721 -216063133 - AluJo SINE Alu -178 134 5 5862 38 6 0 chr2 34625297 34626009 -216061845 + L1PA4 LINE L1 5440 6155 0 1971 219 46 67 chr2 34627358 34627702 -216060152 - MLT2B3 LTR ERVL 0 554 225 2245 105 36 33 chr2 34627702 34628065 -216059789 + THE1B LTR MaLR 1 364 0 1971 219 46 67 chr2 34628065 34628286 -216059568 - MLT2B3 LTR ERVL -329 225 1 193 321 117 36 chr2 34629740 34629877 -216057977 - MER5B DNA MER1_type 0 178 31 320 264 55 0 chr2 34629991 34630082 -216057772 - MER5A DNA MER1_type -77 112 17 273 277 181 58 chr2 34630185 34630340 -216057514 + MER5A DNA MER1_type 15 188 -1 1337 265 71 6 chr2 34630590 34630941 -216056913 + MLT1A2 LTR MaLR 1 374 0 37 23 0 0 chr2 34631454 34631498 -216056356 + AT_rich Low_complexity Low_complexity 1 44 0 1888 179 48 68 chr2 34631765 34632280 -216055574 - MLT1D LTR MaLR 0 505 1 1233 122 89 24 chr2 34633390 34633637 -216054217 + L1MA8 LINE L1 6025 6287 -4 432 0 0 0 chr2 34634127 34634175 -216053679 + (TG)n Simple_repeat Simple_repeat 2 49 0 446 240 41 36 chr2 34634175 34634338 -216053516 + LTR40c LTR ERVL 164 310 -155 420 359 62 48 chr2 34634339 34634899 -216052955 + L1MEc LINE L1 1622 2189 -4207 2049 143 3 0 chr2 34634927 34635227 -216052627 + AluSx SINE Alu 1 301 -11 384 261 197 14 chr2 34636172 34636314 -216051540 + MER5A DNA MER1_type 19 186 -3 768 256 122 89 chr2 34636536 34636958 -216050896 - MLT1J LTR MaLR -9 502 60 2349 85 0 16 chr2 34636958 34637274 -216050580 + AluY SINE Alu 1 311 0 768 256 122 89 chr2 34637274 34637336 -216050518 - MLT1J LTR MaLR -451 60 2 186 103 0 0 chr2 34638402 34638431 -216049423 + (TTG)n Simple_repeat Simple_repeat 1 29 0 280 250 56 83 chr2 34638782 34638926 -216048928 - MIR SINE MIR -46 216 77 203 279 33 16 chr2 34638949 34639010 -216048844 - MER5B DNA MER1_type -6 172 111 5014 39 0 15 chr2 34639324 34639937 -216047917 + L1PA5 LINE L1 5532 6135 -19 27 0 0 0 chr2 34639937 34639964 -216047890 + AT_rich Low_complexity Low_complexity 1 27 0 408 335 78 52 chr2 34640682 34641103 -216046751 + HAL1b LINE L1 39 470 -878 14024 127 46 14 chr2 34641501 34643844 -216044010 - Tigger1 DNA MER2_type 0 2418 1 201 138 0 0 chr2 34643936 34643965 -216043889 + (GA)n Simple_repeat Simple_repeat 2 30 0 2448 212 34 77 chr2 34644257 34644532 -216043322 + L1ME1 LINE L1 5244 5529 -805 2316 57 54 3 chr2 34644532 34644828 -216043026 - AluY SINE Alu 0 311 1 2448 212 34 77 chr2 34644828 34645526 -216042328 + L1ME1 LINE L1 5529 6334 0 783 321 144 24 chr2 34645556 34646055 -216041799 - MLT1G1 LTR MaLR -36 559 1 6385 148 27 4 chr2 34646199 34647460 -216040394 + L1MC1 LINE L1 5023 6314 -19 2532 240 71 62 chr2 34647458 34648694 -216039160 + L1MC5 LINE L1 6658 7904 -57 * 232 349 28 0 chr2 34648738 34648844 -216039010 - MER5B DNA MER1_type -51 127 19 2296 144 59 12 chr2 34650706 34651115 -216036739 + MSTA LTR MaLR 1 428 0 1732 207 39 0 chr2 34652131 34652488 -216035366 + MLT1E1 LTR MaLR 3 373 -281 1191 252 96 26 chr2 34652561 34653233 -216034621 - LTR50 LTR ERVL 0 795 1 758 270 66 37 chr2 34653884 34653963 -216033891 + MIR SINE MIR 15 90 -172 1773 200 5 19 chr2 34653963 34654333 -216033521 - MLT1A1 LTR MaLR 0 365 1 758 270 66 37 chr2 34654333 34654494 -216033360 + MIR SINE MIR 90 262 0 1214 336 97 28 chr2 34654579 34655703 -216032151 + L2 LINE L2 2097 3312 -1 2107 156 52 31 chr2 34655785 34656327 -216031527 + MLT2A2 LTR ERVL 1 554 0 187 285 77 54 chr2 34656967 34657097 -216030757 + L2 LINE L2 1667 1799 -1515 1060 274 28 3 chr2 34657129 34657414 -216030440 + LTR16A LTR ERVL 158 449 -1 389 291 25 49 chr2 34657439 34657642 -216030212 + L2 LINE L2 3112 3309 -4 206 351 91 0 chr2 34657884 34657961 -216029893 + MIR SINE MIR 16 99 -163 3612 45 7 0 chr2 34658423 34658869 -216028985 + L1PA5 LINE L1 5701 6149 -5 189 0 0 0 chr2 34658869 34658890 -216028964 + (TA)n Simple_repeat Simple_repeat 1 21 0 1321 98 0 0 chr2 34660119 34660292 -216027562 + AluSp SINE Alu 132 304 -9 216 0 0 0 chr2 34660639 34660663 -216027191 + (CA)n Simple_repeat Simple_repeat 1 24 0 834 299 70 80 chr2 34660813 34661471 -216026383 - L2 LINE L2 -165 3148 2437 778 291 47 0 chr2 34661490 34661703 -216026151 - MER58A DNA MER1_type 0 224 2 360 0 0 0 chr2 34661868 34661908 -216025946 + (TG)n Simple_repeat Simple_repeat 2 41 0 921 287 115 13 chr2 34661995 34662195 -216025659 - L1MDa LINE L1 -2299 4241 4063 3462 170 74 12 chr2 34662195 34662859 -216024995 + MER44D DNA MER2_type 1 705 0 921 287 115 13 chr2 34662859 34663108 -216024746 - L1MDa LINE L1 -2477 4063 3841 2231 118 0 3 chr2 34663108 34663421 -216024433 - AluSx SINE Alu 0 312 1 921 287 115 13 chr2 34663421 34663579 -216024275 - L1MDa LINE L1 -2699 3841 3571 1310 237 191 49 chr2 34663603 34664371 -216023483 - L1MDa LINE L1 -3011 3529 2620 1822 144 31 10 chr2 34664371 34664663 -216023191 + AluSx SINE Alu 3 300 -12 1310 237 191 49 chr2 34664663 34664770 -216023084 - L1MDa LINE L1 -3920 2620 2530 2329 83 10 3 chr2 34665123 34665424 -216022430 + AluY SINE Alu 3 305 -6 1105 230 113 2 chr2 34665424 34665850 -216022004 - Charlie2 DNA MER1_type -73 2789 2317 548 264 69 44 chr2 34665903 34666221 -216021633 + Charlie2 DNA MER1_type 1978 2303 -559 652 98 0 10 chr2 34666253 34666355 -216021499 + L1MA8 LINE L1 4239 4339 -1807 4619 130 9 16 chr2 34666355 34667098 -216020756 + L1PA13 LINE L1 5419 6161 -2 2434 72 0 3 chr2 34667277 34667582 -216020272 - AluY SINE Alu -7 304 1 4615 162 69 15 chr2 34667771 34668071 -216019783 + L1MA8 LINE L1 4316 4598 -1693 2292 48 10 7 chr2 34668071 34668362 -216019492 - L1PA5 LINE L1 -6 6148 5857 4615 162 69 15 chr2 34668362 34669909 -216017945 + L1MA8 LINE L1 4598 6266 -25 22 56 0 0 chr2 34669912 34669948 -216017906 + AT_rich Low_complexity Low_complexity 1 36 0 1212 235 32 50 chr2 34670342 34670586 -216017268 + MLT1A1 LTR MaLR 30 268 -97 4452 48 67 0 chr2 34670586 34671153 -216016701 + L1PA5 LINE L1 5545 6149 -5 1212 235 32 50 chr2 34671153 34671248 -216016606 + MLT1A1 LTR MaLR 268 363 -2 4455 189 31 17 chr2 34671518 34672028 -216015826 + L1MB8 LINE L1 4909 5410 -768 438 20 0 0 chr2 34672028 34672079 -216015775 + (CA)n Simple_repeat Simple_repeat 2 52 0 4455 189 31 17 chr2 34672079 34672819 -216015035 + L1MB8 LINE L1 5410 6173 -5 290 250 125 21 chr2 34674282 34674378 -216013476 + L2 LINE L2 3158 3263 -9 500 293 63 29 chr2 34674873 34675079 -216012775 + MIR SINE MIR 42 252 -10 704 206 38 16 chr2 34675674 34675858 -216011996 - MER53 DNA DNA -1 188 1 183 80 0 0 chr2 34677613 34677638 -216010216 + (TG)n Simple_repeat Simple_repeat 2 26 0 450 331 22 0 chr2 34677808 34677944 -216009910 + MIR3 SINE MIR 20 158 -50 386 275 11 0 chr2 34678482 34678573 -216009281 - Zaphod DNA AcHobo -1 4030 3939 1961 131 7 10 chr2 34678912 34679217 -216008637 + AluSx SINE Alu 1 304 -8 621 309 87 23 chr2 34679803 34680277 -216007577 + ERVL-E LTR ERVL 2300 2821 -2753 837 263 57 32 chr2 34680278 34680431 -216007423 + MER5C DNA MER1_type 1 149 -175 252 0 0 0 chr2 34680431 34680459 -216007395 + (TA)n Simple_repeat Simple_repeat 1 28 0 2319 76 7 0 chr2 34680460 34680749 -216007105 - AluY SINE Alu -16 295 5 837 263 57 32 chr2 34680749 34680909 -216006945 + MER5C DNA MER1_type 148 324 0 381 207 37 0 chr2 34680935 34681017 -216006837 + MER58C DNA MER1_type 46 130 -85 429 247 0 0 chr2 34681045 34681138 -216006716 + MER58C DNA MER1_type 122 214 -1 2026 299 62 22 chr2 34681140 34682476 -216005378 + ERVL-E LTR ERVL 2817 4302 -1462 1924 177 3 23 chr2 34682507 34682851 -216005003 + MER1B DNA MER1_type 1 337 0 423 75 0 0 chr2 34682919 34682972 -216004882 - Charlie3 DNA MER1_type 0 2712 2660 308 281 87 56 chr2 34683130 34683361 -216004493 + ERVL-E LTR ERVL 5524 5761 -3 280 244 59 52 chr2 34683247 34683382 -216004472 + Ricksha DNA DNA 237 372 -1674 * 350 348 7 14 chr2 34683419 34683557 -216004297 + MLT2E LTR ERVL 33 169 -459 373 247 67 40 chr2 34683723 34683873 -216003981 + MLT2E LTR ERVL 475 628 0 1615 232 12 72 chr2 34683873 34684166 -216003688 - Zaphod DNA AcHobo -3647 384 120 4220 161 52 2 chr2 34684166 34684959 -216002895 - L1MA8 LINE L1 -18 6273 5442 1615 232 12 72 chr2 34684959 34685066 -216002788 - Zaphod DNA AcHobo -3911 120 8 679 205 16 0 chr2 34685864 34685991 -216001863 + MER2 DNA MER2_type 1 129 -216 1258 106 11 6 chr2 34685992 34686171 -216001683 - AluSg/x SINE Alu -8 304 125 463 151 0 0 chr2 34686171 34686257 -216001597 + MER2 DNA MER2_type 124 209 -136 181 327 0 18 chr2 34687529 34687584 -216000270 + L2 LINE L2 3025 3078 -194 424 293 47 54 chr2 34688371 34688624 -215999230 - MIR SINE MIR -12 250 4 1898 154 20 3 chr2 34688752 34689057 -215998797 - AluSx SINE Alu -2 310 1 815 187 21 16 chr2 34689105 34689292 -215998562 + MER53 DNA DNA 1 188 -1 3857 158 19 25 chr2 34689309 34690003 -215997851 + Tigger1 DNA MER2_type 1 690 -1728 4214 116 44 54 chr2 34690003 34690020 -215997834 + MER4E LTR ERV1 1 17 -762 2210 125 0 0 chr2 34690020 34690317 -215997537 - AluSg SINE Alu -13 297 1 4214 116 44 54 chr2 34690317 34691024 -215996830 + MER4E LTR ERV1 17 718 -61 2664 123 21 9 chr2 34691032 34691464 -215996390 + Tigger1 DNA MER2_type 691 1127 -1291 * 2802 137 38 13 chr2 34691461 34691936 -215995918 + Tigger1 DNA MER2_type 1930 2416 -2 573 208 0 0 chr2 34692883 34692979 -215994875 + MER58A DNA MER1_type 2 97 -10 456 274 188 0 chr2 34693035 34693221 -215994633 - MER58A DNA MER1_type -3 221 1 347 219 49 0 chr2 34693722 34693804 -215994050 - LTR50 LTR ERVL 0 795 710 977 47 78 0 chr2 34694545 34694674 -215993180 + MER85 DNA T2_type 1 139 0 563 188 30 10 chr2 34695349 34695450 -215992404 - FRAM SINE Alu -27 149 47 435 297 47 0 chr2 34696198 34696326 -215991528 - MIR3 SINE MIR -7 201 68 22371 153 41 8 chr2 34696816 34701313 -215986541 + L1M1 LINE L1 16 4673 -2892 977 175 105 15 chr2 34701784 34701984 -215985870 + MER20 DNA MER1_type 1 218 -1 393 282 141 37 chr2 34701988 34702181 -215985673 - MIR SINE MIR -38 224 16 2503 144 18 38 chr2 34702231 34702613 -215985241 - Tigger2a DNA MER2_type -2274 434 61 2307 70 0 55 chr2 34702613 34702940 -215984914 + AluY SINE Alu 1 309 -2 2503 144 18 38 chr2 34702940 34703000 -215984854 - Tigger2a DNA MER2_type -2647 61 1 23 0 0 0 chr2 34703452 34703475 -215984379 + AT_rich Low_complexity Low_complexity 1 23 0 1971 110 92 7 chr2 34703928 34704209 -215983645 + AluSg SINE Alu 1 305 -5 1884 186 52 31 chr2 34704298 34704745 -215983109 + L1MB7 LINE L1 5375 5830 -354 532 176 9 76 chr2 34704747 34704770 -215983084 + L1MB7 LINE L1 6003 6026 -154 2355 86 3 3 chr2 34704770 34705072 -215982782 - AluY SINE Alu -9 302 1 532 176 9 76 chr2 34705072 34705207 -215982647 + L1MB7 LINE L1 6026 6151 -29 328 317 75 60 chr2 34705795 34705994 -215981860 - HAL1 LINE L1 -2260 247 46 267 245 75 31 chr2 34706114 34706212 -215981642 + MIR SINE MIR 39 151 -65 502 211 116 60 chr2 34706348 34706523 -215981331 + MER5A DNA MER1_type 4 189 0 2098 112 3 10 chr2 34706887 34707182 -215980672 - AluSx SINE Alu -19 293 1 2504 67 0 0 chr2 34707423 34707723 -215980131 + AluSg1 SINE Alu 1 300 -9 21 0 0 0 chr2 34708644 34708665 -215979189 + AT_rich Low_complexity Low_complexity 1 21 0 258 276 26 78 chr2 34709224 34709253 -215978601 + MIR SINE MIR 68 97 -165 2422 71 0 10 chr2 34709253 34709561 -215978293 - AluY SINE Alu -6 305 1 258 276 26 78 chr2 34709561 34709647 -215978207 + MIR SINE MIR 97 177 -85 181 356 41 0 chr2 34710001 34710074 -215977780 + MIR SINE MIR 55 130 -78 180 0 0 0 chr2 34710235 34710255 -215977599 + (A)n Simple_repeat Simple_repeat 1 20 0 2530 80 0 0 chr2 34710422 34710733 -215977121 + AluY SINE Alu 1 311 0 2191 82 4 0 chr2 34710733 34711042 -215976812 + AluY SINE Alu 1 310 0 1184 120 89 13 chr2 34711889 34711961 -215975893 - L1MA9 LINE L1 -2 6310 6245 207 0 0 0 chr2 34711961 34711984 -215975870 + (TA)n Simple_repeat Simple_repeat 2 24 0 1184 120 89 13 chr2 34711984 34712136 -215975718 - L1MA9 LINE L1 -67 6245 6069 338 305 26 63 chr2 34712391 34712581 -215975273 + MIR3 SINE MIR 23 205 -3 339 285 152 7 chr2 34712900 34713051 -215974803 + MIR3 SINE MIR 30 202 -6 276 220 0 0 chr2 34713217 34713276 -215974578 + L2 LINE L2 3255 3313 0 221 0 35 0 chr2 34713979 34714008 -215973846 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1975 121 0 0 chr2 34714008 34714272 -215973582 - AluSg SINE Alu -46 264 1 21 0 0 0 chr2 34714698 34714719 -215973135 + AT_rich Low_complexity Low_complexity 1 21 0 2406 95 0 0 chr2 34715187 34715492 -215972362 + AluSc SINE Alu 1 305 -4 207 0 0 0 chr2 34715976 34715999 -215971855 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 34717101 34717123 -215970731 + AT_rich Low_complexity Low_complexity 1 22 0 538 225 11 120 chr2 34718352 34718543 -215969311 + MER5B DNA MER1_type 1 170 -8 522 256 28 17 chr2 34718779 34718955 -215968899 - MER5B DNA MER1_type 0 178 1 2451 212 29 27 chr2 34719210 34719763 -215968091 - MLT2B3 LTR ERVL 0 554 1 321 286 53 8 chr2 34720799 34720932 -215966922 + L1ME4a LINE L1 5982 6120 -1 197 404 43 11 chr2 34721418 34721512 -215966342 + L2 LINE L2 3147 3243 -29 2535 51 19 0 chr2 34721656 34721969 -215965885 - L1PA5 LINE L1 -8 6146 5828 310 329 19 19 chr2 34722067 34722228 -215965626 + MLT1J2 LTR MaLR 268 428 -22 217 247 103 62 chr2 34724480 34724577 -215963277 - MIR SINE MIR -65 143 43 2408 96 3 0 chr2 34724644 34724945 -215962909 - AluSp SINE Alu -11 302 1 494 285 90 38 chr2 34725352 34725619 -215962235 - MER45C DNA AcHobo -353 600 320 * 602 212 144 28 chr2 34725614 34725971 -215961883 - MLT1E2 LTR MaLR -76 550 59 251 287 82 8 chr2 34725867 34725989 -215961865 - MLT2C1 LTR ERVL -198 199 69 * 214 323 20 10 chr2 34726032 34726131 -215961723 - L2 LINE L2 -1004 2310 2211 249 33 0 0 chr2 34726459 34726489 -215961365 + (TG)n Simple_repeat Simple_repeat 2 31 0 772 159 16 8 chr2 34726995 34727121 -215960733 + FLAM_C SINE Alu 1 127 -16 260 167 0 42 chr2 34729386 34729434 -215958420 + MIR SINE MIR 101 146 -62 783 218 16 71 chr2 34729496 34729748 -215958106 - MLT2B1 LTR ERVL 0 520 283 607 274 59 59 chr2 34729887 34730175 -215957679 - MLT1I LTR MaLR -82 327 40 555 304 254 25 chr2 34730309 34731251 -215956603 + L2 LINE L2 1730 2886 -428 341 306 0 0 chr2 34731547 34731632 -215956222 + L2 LINE L2 3229 3313 0 2349 77 3 3 chr2 34732092 34732392 -215955462 - AluY SINE Alu -11 300 1 207 227 0 0 chr2 34732428 34732472 -215955382 + MIR SINE MIR 109 152 -110 677 280 91 12 chr2 34732545 34732788 -215955066 - MIR SINE MIR 0 262 1 196 278 43 11 chr2 34732901 34733014 -215954840 + MIR3 SINE MIR 122 262 0 263 286 29 0 chr2 34733778 34733848 -215954006 - MIR SINE MIR -117 145 74 2261 217 82 4 chr2 34733968 34734194 -215953660 - MLT1E LTR MaLR -2 591 384 390 42 0 0 chr2 34734194 34734242 -215953612 + (TATG)n Simple_repeat Simple_repeat 2 49 0 2261 217 82 4 chr2 34734242 34734555 -215953299 - MLT1E LTR MaLR -209 384 10 284 291 91 15 chr2 34734568 34734767 -215953087 - L2 LINE L2 -218 3054 2841 245 234 16 16 chr2 34734880 34734944 -215952910 - L2 LINE L2 0 3272 3209 299 23 47 0 chr2 34735469 34735512 -215952342 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2143 98 4 0 chr2 34735514 34735791 -215952063 - AluY SINE Alu -33 278 1 1623 157 12 0 chr2 34736091 34736346 -215951508 + MER1A DNA MER1_type 1 258 -269 5861 171 25 16 chr2 34736353 34737144 -215950710 - L1PB1 LINE L1 -8 6143 5361 2211 116 0 13 chr2 34737144 34737446 -215950408 + AluSq SINE Alu 1 298 -15 5861 171 25 16 chr2 34737446 34738790 -215949064 - L1PB1 LINE L1 -790 5361 3977 1677 118 19 11 chr2 34738791 34739061 -215948793 + MER1A DNA MER1_type 258 529 0 208 370 108 0 chr2 34739066 34739201 -215948653 - MIR SINE MIR -86 176 23 206 233 117 0 chr2 34740403 34740463 -215947391 + MIR SINE MIR 119 185 -77 471 263 165 10 chr2 34741318 34741512 -215946342 + MIR SINE MIR 12 235 -27 22 35 0 0 chr2 34741578 34741607 -215946247 + AT_rich Low_complexity Low_complexity 1 29 0 1812 98 55 4 chr2 34742090 34742346 -215945508 - AluSg SINE Alu -16 294 26 4570 257 64 37 chr2 34742917 34744397 -215943457 + L1MEc LINE L1 69 1508 -4707 587 215 15 8 chr2 34744397 34744527 -215943327 + FLAM_A SINE Alu 1 131 -2 4570 257 64 37 chr2 34744527 34744735 -215943119 + L1MEc LINE L1 1508 1709 -4506 2486 70 0 6 chr2 34744735 34745048 -215942806 - AluY SINE Alu 0 311 1 4570 257 64 37 chr2 34745048 34745485 -215942369 + L1MEc LINE L1 1709 2133 -4082 1369 220 24 30 chr2 34745485 34745781 -215942073 - AluJb SINE Alu -18 294 1 4570 257 64 37 chr2 34745781 34746481 -215941373 + L1MEc LINE L1 2133 2952 -3263 2450 176 18 29 chr2 34746507 34747059 -215940795 + L1MA10 LINE L1 5789 6334 0 432 299 51 10 chr2 34747197 34747382 -215940472 + MIR3 SINE MIR 14 205 -3 267 31 0 0 chr2 34747422 34747454 -215940400 + (CA)n Simple_repeat Simple_repeat 2 33 0 191 125 25 0 chr2 34750470 34750510 -215937344 + CT-rich Low_complexity Low_complexity 2 42 0 261 210 16 16 chr2 34750545 34750607 -215937247 - MLT1K LTR MaLR -339 249 188 231 217 0 0 chr2 34750903 34750963 -215936891 + HAL1b LINE L1 696 755 -593 727 189 13 20 chr2 34751161 34751314 -215936540 + MER6B DNA MER2_type 1 152 -58 3196 151 2 3 chr2 34751314 34751975 -215935879 + L1P4 LINE L1 4772 5432 -736 3191 173 73 10 chr2 34751975 34752692 -215935162 - LTR1B LTR ERV1 0 785 8 4617 94 50 20 chr2 34752692 34753408 -215934446 + L1PA13 LINE L1 5422 6159 -4 23 33 0 0 chr2 34753412 34753442 -215934412 + AT_rich Low_complexity Low_complexity 1 30 0 298 250 56 0 chr2 34753443 34753515 -215934339 + MER6B DNA MER2_type 130 205 -5 205 194 0 0 chr2 34753553 34753589 -215934265 + A-rich Low_complexity Low_complexity 4 39 0 1122 221 13 77 chr2 34754084 34754383 -215933471 + AluJo SINE Alu 3 282 -30 2283 115 3 0 chr2 34754410 34754715 -215933139 + AluSg SINE Alu 1 306 -4 271 290 71 4 chr2 34754947 34755216 -215932638 + L1M4 LINE L1 2732 3018 -3128 230 194 42 14 chr2 34755230 34755302 -215932552 + (TA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr2 34755563 34755585 -215932269 + AT_rich Low_complexity Low_complexity 1 22 0 1937 251 47 41 chr2 34755728 34756409 -215931445 + L1 LINE L1 65 749 -6281 1524 250 34 17 chr2 34756412 34757128 -215930726 + L1 LINE L1 1780 2517 -4520 7144 172 78 17 chr2 34757181 34757486 -215930368 + L1 LINE L1 3996 4281 -2825 1818 122 15 92 chr2 34757486 34757823 -215930031 - AluSq SINE Alu 0 313 3 7144 172 78 17 chr2 34757823 34759295 -215928559 + L1 LINE L1 4281 5880 -1226 2088 132 72 1 chr2 34759287 34759309 -215928545 - L1M2 LINE L1 -661 5630 5611 * 5594 112 39 6 chr2 34759309 34761027 -215926827 - L1PA12 LINE L1 0 6168 4394 2088 132 72 1 chr2 34761027 34761615 -215926239 - L1M2 LINE L1 -680 5611 4978 323 305 75 21 chr2 34761670 34761857 -215925997 + L1MC4a LINE L1 5149 5345 -801 1934 168 14 0 chr2 34761857 34762148 -215925706 + AluSx SINE Alu 1 295 -17 518 295 132 28 chr2 34762201 34762564 -215925290 + L1MC4a LINE L1 5421 5821 -1987 2097 119 0 0 chr2 34762570 34762848 -215925006 + AluSg SINE Alu 1 278 -32 1625 185 0 30 chr2 34762896 34763194 -215924660 + AluJo SINE Alu 1 289 -23 227 217 47 75 chr2 34763213 34763319 -215924535 + L1MC4a LINE L1 5839 5941 -1867 1889 164 71 22 chr2 34763799 34764135 -215923719 + MSTA LTR MaLR 1 362 -66 6477 65 54 6 chr2 34764135 34765183 -215922671 - L1PA6 LINE L1 -4 6150 5074 1889 164 71 22 chr2 34765183 34765254 -215922600 + MSTA LTR MaLR 362 428 0 8529 172 48 5 chr2 34765254 34766835 -215921019 + MSTB-int LTR MaLR 1 1649 -2 2025 190 81 0 chr2 34766837 34767231 -215920623 + MSTB LTR MaLR 1 426 0 238 175 70 0 chr2 34770084 34770141 -215917713 - MIR SINE MIR -65 197 137 1457 325 82 46 chr2 34770815 34771213 -215916641 + L2 LINE L2 1739 2122 -1150 2330 83 0 7 chr2 34771213 34771513 -215916341 - AluY SINE Alu -13 298 1 1457 325 82 46 chr2 34771513 34772389 -215915465 + L2 LINE L2 2122 3059 -213 180 111 0 0 chr2 34772619 34772646 -215915208 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2297 104 0 3 chr2 34772829 34773127 -215914727 + AluSc SINE Alu 1 297 -12 180 0 0 0 chr2 34773127 34773147 -215914707 + (TA)n Simple_repeat Simple_repeat 2 21 0 394 256 44 7 chr2 34773841 34773978 -215913876 - MER69 DNA AcHobo -1084 142 1 336 380 68 22 chr2 34775046 34775546 -215912308 + L2 LINE L2 1774 2296 -1018 766 279 82 55 chr2 34775651 34776067 -215911787 - MLT1J1 LTR MaLR -3 443 17 213 214 146 79 chr2 34776350 34776439 -215911415 + MER5B DNA MER1_type 84 178 0 6711 115 25 17 chr2 34776508 34777571 -215910283 - MER11C LTR ERVK 0 1071 1 2095 138 0 0 chr2 34777599 34777897 -215909957 + AluSc SINE Alu 1 298 -11 422 230 11 48 chr2 34778245 34778432 -215909422 + (TA)n Simple_repeat Simple_repeat 1 180 0 195 218 0 0 chr2 34778445 34778546 -215909308 + (TA)n Simple_repeat Simple_repeat 1 101 0 892 252 107 49 chr2 34778547 34778619 -215909235 - MLT2D LTR ERVL -41 423 357 2246 113 6 0 chr2 34778619 34778930 -215908924 + AluSp SINE Alu 1 313 0 892 252 107 49 chr2 34778930 34779213 -215908641 - MLT2D LTR ERVL -107 357 53 29 47 0 0 chr2 34779436 34779479 -215908375 + AT_rich Low_complexity Low_complexity 1 43 0 664 338 85 25 chr2 34779594 34780067 -215907787 + L2 LINE L2 2812 3312 -1 509 294 60 10 chr2 34780834 34781218 -215906636 + L1M4 LINE L1 2652 3054 -3092 858 277 111 21 chr2 34781833 34782212 -215905642 + MER77 LTR ERV1 185 597 -8 1582 168 82 48 chr2 34782553 34782905 -215904949 - MLT1A1 LTR MaLR 0 365 2 518 309 61 77 chr2 34783305 34783762 -215904092 + L1M4 LINE L1 2689 3138 -3008 346 292 58 25 chr2 34783819 34784096 -215903758 + L1M4 LINE L1 3687 3972 -2174 734 196 0 0 chr2 34784192 34784325 -215903529 + MER47A DNA MER2_type 1 133 -233 655 197 21 7 chr2 34784335 34784477 -215903377 + Tigger1 DNA MER2_type 2 145 -2273 975 167 33 0 chr2 34784482 34784662 -215903192 + Tigger1 DNA MER2_type 2233 2418 0 * 1315 137 73 0 chr2 34784662 34784880 -215902974 + MER47A DNA MER2_type 129 362 -4 239 290 104 18 chr2 34784889 34785110 -215902744 + L1M4 LINE L1 4102 4341 -1805 501 198 15 86 chr2 34785196 34785393 -215902461 + L1MC5 LINE L1 6928 7110 -851 820 238 48 113 chr2 34785504 34785904 -215901950 + MLT1A2 LTR MaLR 1 374 0 558 201 36 0 chr2 34785904 34786043 -215901811 + L1MC5 LINE L1 7274 7417 -544 2279 110 3 0 chr2 34786100 34786409 -215901445 + AluY SINE Alu 1 310 -1 267 178 0 68 chr2 34786464 34786537 -215901317 + L1MA8 LINE L1 6182 6249 -42 258 130 167 0 chr2 34786539 34786593 -215901261 + L1MA8 LINE L1 6208 6270 -21 1897 111 75 0 chr2 34786599 34786879 -215900975 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 34786882 34786903 -215900951 + AT_rich Low_complexity Low_complexity 1 21 0 373 206 147 80 chr2 34786956 34787344 -215900510 + L1MC5 LINE L1 7510 7923 -38 477 129 11 21 chr2 34788538 34788631 -215899223 - THE1C-int LTR MaLR -1488 92 1 1719 126 21 149 chr2 34788631 34789061 -215898793 - THE1C LTR MaLR 0 375 1 1060 109 32 4 chr2 34789132 34789330 -215898524 + L1MA1 LINE L1 5925 6132 -170 2183 115 0 16 chr2 34789460 34789774 -215898080 + AluSc SINE Alu 1 309 0 288 0 0 0 chr2 34789784 34789816 -215898038 + (TA)n Simple_repeat Simple_repeat 2 33 0 2201 105 0 41 chr2 34791170 34791484 -215896370 + AluSq SINE Alu 1 301 -12 2287 77 10 0 chr2 34792401 34792701 -215895153 - AluY SINE Alu -8 303 1 284 194 97 0 chr2 34793223 34793285 -215894569 + MLT2D LTR ERVL 216 283 -131 211 132 0 26 chr2 34794309 34794347 -215893507 + (TTC)n Simple_repeat Simple_repeat 1 37 0 327 109 4 0 chr2 34794400 34794460 -215893394 + Alu SINE Alu 1 46 -256 756 280 94 5 chr2 34794886 34795215 -215892639 + LTR16A1 LTR ERVL 114 455 -2 246 100 0 0 chr2 34795238 34795261 -215892593 + (TC)n Simple_repeat Simple_repeat 1 26 -14 243 0 0 0 chr2 34795261 34795288 -215892566 + (CA)n Simple_repeat Simple_repeat 1 27 0 246 100 0 0 chr2 34795288 34795304 -215892550 + (TC)n Simple_repeat Simple_repeat 25 40 0 435 19 0 0 chr2 34795592 34795644 -215892210 + (TG)n Simple_repeat Simple_repeat 2 53 0 1145 104 55 0 chr2 34795755 34795918 -215891936 + AluSg SINE Alu 1 172 -138 1011 262 23 52 chr2 34796023 34796366 -215891488 - MER77-int LTR ERV1 -3845 346 14 2626 197 58 39 chr2 34796384 34796972 -215890882 - MER77 LTR ERV1 -6 599 1 1436 148 186 5 chr2 34796976 34797380 -215890474 + Charlie5 DNA MER1_type 1669 2145 -467 204 290 0 16 chr2 34798885 34798947 -215888907 + CT-rich Low_complexity Low_complexity 2 62 0 343 268 94 0 chr2 34798986 34799124 -215888730 + MER103 DNA DNA 13 163 -3 2231 98 0 0 chr2 34799280 34799566 -215888288 + AluY SINE Alu 9 294 -17 300 53 0 0 chr2 34799652 34799690 -215888164 + (CA)n Simple_repeat Simple_repeat 1 38 0 1849 5 5 0 chr2 34800520 34800722 -215887132 + AluYa5 SINE Alu 106 308 -3 404 315 150 23 chr2 34800734 34801080 -215886774 - MLT1C LTR MaLR -68 399 10 2283 78 0 0 chr2 34801221 34801532 -215886322 + AluY SINE Alu 1 311 0 206 331 39 58 chr2 34802589 34802743 -215885111 - MIR SINE MIR -48 214 64 931 220 8 62 chr2 34804033 34804152 -215883702 + L1MB8 LINE L1 5017 5116 -1030 1851 122 20 54 chr2 34804152 34804280 -215883574 + AluSc SINE Alu 1 132 -177 2450 60 10 0 chr2 34804280 34804578 -215883276 + AluY SINE Alu 1 301 -10 1851 122 20 54 chr2 34804578 34804744 -215883110 + AluSc SINE Alu 132 285 -24 931 220 8 62 chr2 34804744 34804883 -215882971 + L1MB8 LINE L1 5116 5261 -885 2151 186 6 55 chr2 34804891 34805363 -215882491 + L1MB8 LINE L1 5718 6166 -12 22 0 0 0 chr2 34805596 34805618 -215882236 + AT_rich Low_complexity Low_complexity 1 22 0 252 86 0 0 chr2 34806243 34806278 -215881576 + (TG)n Simple_repeat Simple_repeat 1 35 0 24 53 0 0 chr2 34806596 34806634 -215881220 + AT_rich Low_complexity Low_complexity 1 38 0 23 54 0 0 chr2 34806890 34806927 -215880927 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 34807321 34807342 -215880512 + AT_rich Low_complexity Low_complexity 1 21 0 2315 89 0 3 chr2 34807417 34807721 -215880133 + AluY SINE Alu 1 303 -8 4011 104 0 4 chr2 34808310 34808821 -215879033 + MER9 LTR ERVK 3 511 0 22272 74 1 6 chr2 34808821 34811621 -215876233 + HERVK9 LTR ERVK 1 2786 -3130 1941 52 0 0 chr2 34811621 34811852 -215876002 + HERVK9 LTR ERVK 3711 3941 -1975 * 7750 102 3 4 chr2 34811851 34812906 -215874948 + HERVK9 LTR ERVK 4582 5635 -281 2208 148 4 2 chr2 34812927 34813283 -215874571 + HERVK9 LTR ERVK 5635 5916 0 3758 95 12 18 chr2 34813283 34813797 -215874057 + MER9 LTR ERVK 1 511 0 196 294 86 68 chr2 34814679 34814842 -215873012 - L3 LINE CR1 -1 1576 1411 1454 202 58 17 chr2 34815639 34816001 -215871853 + Charlie4a DNA MER1_type 8 384 -124 36 40 0 0 chr2 34816554 34816604 -215871250 + AT_rich Low_complexity Low_complexity 1 50 0 1548 103 0 5 chr2 34816902 34817125 -215870729 - AluSg/x SINE Alu 0 300 79 210 143 0 0 chr2 34817283 34817318 -215870536 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 550 334 127 14 chr2 34817607 34818178 -215869676 + L2 LINE L2 2682 3313 0 631 201 54 49 chr2 34818576 34818760 -215869094 + MLT1B LTR MaLR 3 187 -203 257 337 11 0 chr2 34819175 34819270 -215868584 + MIR3 SINE MIR 90 185 -23 1498 137 69 4 chr2 34820098 34820375 -215867479 - L1MA8 LINE L1 0 6291 5997 2178 100 0 4 chr2 34820802 34821106 -215866748 + AluY SINE Alu 1 303 0 2311 97 0 3 chr2 34821106 34821414 -215866440 + AluY SINE Alu 2 308 -3 206 135 11 56 chr2 34821437 34821526 -215866328 + A-rich Low_complexity Low_complexity 2 86 0 240 303 0 40 chr2 34821628 34821727 -215866127 + (TA)n Simple_repeat Simple_repeat 2 96 0 2017 120 7 10 chr2 34821857 34822149 -215865705 + AluSq SINE Alu 1 291 -22 231 36 0 0 chr2 34822151 34822179 -215865675 + (TG)n Simple_repeat Simple_repeat 2 29 0 240 65 43 94 chr2 34822225 34822363 -215865491 + (TTATA)n Simple_repeat Simple_repeat 5 135 0 375 305 37 53 chr2 34822426 34822616 -215865238 - MIR SINE MIR 0 262 76 706 123 15 51 chr2 34822851 34823046 -215864808 + HERV9 LTR ERV1 713 900 -7726 353 161 0 0 chr2 34823044 34823106 -215864748 + HERV9 LTR ERV1 7503 7564 -835 * 4735 102 4 8 chr2 34823102 34824044 -215863810 + HERV9 LTR ERV1 504 8399 0 528 134 18 18 chr2 34824044 34824146 -215863708 + pTR5 LTR ERV1 1118 1219 -1219 974 108 102 0 chr2 34824140 34824306 -215863548 + pTR5 LTR ERV1 210 392 -2046 2743 237 28 43 chr2 34824822 34825318 -215862536 + L1MCb LINE L1 570 1072 -5492 2040 122 0 43 chr2 34825318 34825622 -215862232 + AluSg SINE Alu 1 291 -19 2743 237 28 43 chr2 34825622 34826081 -215861773 + L1MCb LINE L1 1072 1516 -5048 2449 69 0 7 chr2 34826081 34826385 -215861469 + AluY SINE Alu 1 302 -9 2743 237 28 43 chr2 34826385 34826649 -215861205 + L1MCb LINE L1 1516 1783 -4781 1701 153 10 17 chr2 34826666 34826954 -215860900 - AluJb SINE Alu -26 286 1 1824 175 44 6 chr2 34827050 34827392 -215860462 - L1PB4 LINE L1 -4 6152 5798 922 197 10 10 chr2 34827395 34827603 -215860251 + L1P LINE L1 5078 5285 -861 712 225 234 11 chr2 34827606 34827961 -215859893 + L1MCb LINE L1 1950 2383 -4181 2315 77 0 27 chr2 34827965 34828263 -215859591 + AluY SINE Alu 1 290 -21 1372 146 82 167 chr2 34828406 34828872 -215858982 - MSTA LTR MaLR -2 426 1 1401 188 28 10 chr2 34828965 34829394 -215858460 - LTR32 LTR ERVL -1 470 8 180 314 220 25 chr2 34829581 34829699 -215858155 + L3 LINE CR1 1392 1532 -45 1792 158 123 22 chr2 34829790 34829932 -215857922 + MER57A LTR ERV1 1 127 -276 2115 178 66 82 chr2 34829932 34830494 -215857360 - MLT2B3 LTR ERVL 0 554 2 1792 158 123 22 chr2 34830494 34830717 -215857137 + MER57A LTR ERV1 127 403 0 3159 208 50 2 chr2 34831660 34832284 -215855570 + MLT1E1 LTR MaLR 1 654 0 2167 106 0 0 chr2 34832771 34833075 -215854779 - AluSq SINE Alu 0 305 2 2412 84 0 0 chr2 34833092 34833389 -215854465 - AluY SINE Alu -13 298 2 2047 160 33 3 chr2 34833840 34834172 -215853682 + MER2 DNA MER2_type 3 344 0 1093 175 85 88 chr2 34834226 34834580 -215853274 + MLT2B1 LTR ERVL 7 359 -55 810 92 0 21 chr2 34834588 34834730 -215853124 + (TC)n Simple_repeat Simple_repeat 2 140 0 2164 64 3 11 chr2 34836896 34837206 -215850648 - AluY SINE Alu 0 308 1 3033 185 42 10 chr2 34837377 34838110 -215849744 + L1MB8 LINE L1 4679 5435 -743 2132 252 62 41 chr2 34838294 34839196 -215848658 + L1MB8 LINE L1 3933 4853 -1293 625 127 75 202 chr2 34839191 34839458 -215848396 - L1MB8 LINE L1 -40 6138 5906 * 3767 142 75 41 chr2 34839445 34840176 -215847678 + L1MB8 LINE L1 5414 6169 -9 792 166 72 0 chr2 34840302 34840441 -215847413 + MLT1A1 LTR MaLR 170 318 -47 1723 158 8 0 chr2 34840572 34840838 -215847016 - AluJo SINE Alu -21 291 24 4233 141 112 35 chr2 34841241 34842008 -215845846 - LTR1B LTR ERV1 0 826 1 744 264 84 13 chr2 34842065 34842292 -215845562 - MIR SINE MIR -12 250 8 239 377 117 0 chr2 34842268 34842422 -215845432 + L2 LINE L2 3101 3272 0 * 455 242 19 31 chr2 34842516 34842677 -215845177 + L1M4 LINE L1 49 207 -6335 1975 154 10 0 chr2 34842782 34843088 -215844766 - AluSg SINE Alu -1 309 1 1070 189 18 53 chr2 34843130 34843357 -215844497 - MER20 DNA MER1_type 0 219 1 3276 209 55 17 chr2 34843368 34843812 -215844042 + L1MB8 LINE L1 4963 5389 -789 3285 140 29 4 chr2 34843812 34844297 -215843557 + LOR1a LTR ERV1 1 497 0 3276 209 55 17 chr2 34844297 34845018 -215842836 + L1MB8 LINE L1 5389 6170 -8 454 183 51 44 chr2 34845024 34845161 -215842693 + L1MC5 LINE L1 7772 7909 -52 2198 124 3 0 chr2 34845170 34845469 -215842385 + AluSx SINE Alu 1 300 -12 391 286 117 49 chr2 34845900 34846105 -215841749 + MIR SINE MIR 1 221 -41 2118 99 14 3 chr2 34846162 34846445 -215841409 + AluSg SINE Alu 1 286 -24 502 252 180 18 chr2 34846639 34846861 -215840993 + MIR SINE MIR 3 260 -2 431 178 76 34 chr2 34847160 34847278 -215840576 - MER69 DNA AcHobo -24 2502 2380 258 313 0 0 chr2 34847434 34847501 -215840353 - MER69 DNA AcHobo -110 67 1 424 207 49 177 chr2 34847509 34847635 -215840219 + L2 LINE L2 3048 3114 -199 2158 115 7 0 chr2 34847635 34847940 -215839914 - AluSx SINE Alu 0 312 6 424 207 49 177 chr2 34847940 34848118 -215839736 + L2 LINE L2 3114 3313 0 5251 109 46 64 chr2 34849495 34850336 -215837518 + LTR12 LTR ERV1 1 826 0 3607 118 10 0 chr2 34850712 34851204 -215836650 + LOR1a LTR ERV1 1 497 0 1146 227 81 25 chr2 34851268 34851345 -215836509 + MLT1C LTR MaLR 3 74 -393 2309 102 3 3 chr2 34851345 34851648 -215836206 + AluSc SINE Alu 1 303 -6 1146 227 81 25 chr2 34851648 34851891 -215835963 + MLT1C LTR MaLR 74 341 -126 1531 165 51 15 chr2 34851891 34852311 -215835543 - MER61D LTR ERV1 0 501 4 727 190 7 15 chr2 34852311 34852444 -215835410 + MLT1C LTR MaLR 336 467 0 207 0 0 0 chr2 34852518 34852541 -215835313 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 693 94 55 31 chr2 34853825 34853952 -215833902 + MSTA-int LTR MaLR 1421 1550 -30 1994 164 119 11 chr2 34853960 34854339 -215833515 + MSTA LTR MaLR 9 428 0 1329 213 7 31 chr2 34855215 34855506 -215832348 - MER61D-int LTR ERV1 -55 4136 3853 2373 100 3 0 chr2 34855514 34855815 -215832039 - AluY SINE Alu -9 302 1 1375 123 155 20 chr2 34855874 34856126 -215831728 + LTR26E LTR ERV1 1 286 -336 1745 117 82 82 chr2 34856557 34856613 -215831241 + LTR26B LTR ERV1 189 244 -287 2313 66 40 13 chr2 34856613 34856915 -215830939 + AluY SINE Alu 1 310 -1 1745 117 82 82 chr2 34856915 34856968 -215830886 + LTR26B LTR ERV1 244 296 -235 2171 99 23 78 chr2 34856968 34857353 -215830501 - THE1B LTR MaLR 0 364 1 1745 117 82 82 chr2 34857353 34857585 -215830269 + LTR26B LTR ERV1 295 531 0 1339 200 165 17 chr2 34857657 34858002 -215829852 - MSTD LTR MaLR 0 396 1 1685 219 70 111 chr2 34858005 34858691 -215829163 - MER61D-int LTR ERV1 -455 3736 3079 2278 152 86 10 chr2 34858734 34859129 -215828725 + MSTA LTR MaLR 4 428 0 9546 160 32 16 chr2 34859153 34860763 -215827091 + MSTA-int LTR MaLR 15 1650 -1 1654 164 183 16 chr2 34860764 34861131 -215826723 + MSTA LTR MaLR 1 428 0 3014 179 10 2 chr2 34861147 34861640 -215826214 + LOR1a LTR ERV1 1 497 0 3821 245 20 57 chr2 34861643 34862728 -215825126 - MER61D-int LTR ERV1 -1133 3058 2014 456 346 56 49 chr2 34862536 34863194 -215824660 - HERVL LTR ERVL -2172 3482 2820 * 22 0 0 0 chr2 34863265 34863287 -215824567 + AT_rich Low_complexity Low_complexity 1 22 0 275 277 12 12 chr2 34863354 34863437 -215824417 - HERVL LTR ERVL -3736 2311 2229 3324 248 70 89 chr2 34863744 34865178 -215822676 - MER4B-int LTR ERV1 -1986 4772 3367 2380 93 0 0 chr2 34865653 34865955 -215821899 - AluY SINE Alu -7 304 3 207 0 0 0 chr2 34865959 34865982 -215821872 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1951 133 15 0 chr2 34865992 34866263 -215821591 - AluSx SINE Alu -37 275 1 2225 100 0 3 chr2 34866607 34866897 -215820957 - AluSc SINE Alu -20 289 1 182 362 0 57 chr2 34867083 34867188 -215820666 + L3 LINE CR1 8 106 -1471 211 273 18 0 chr2 34868586 34868641 -215819213 + GA-rich Low_complexity Low_complexity 4 59 0 1616 286 79 57 chr2 34868720 34869381 -215818473 + ERVL LTR ERVL 3179 3824 -1940 1582 194 0 58 chr2 34869381 34869706 -215818148 + AluJo SINE Alu 3 308 -4 1616 286 79 57 chr2 34869706 34870264 -215817590 + ERVL LTR ERVL 3824 4490 -1274 2534 50 3 3 chr2 34870264 34870564 -215817290 + AluY SINE Alu 1 300 -11 1616 286 79 57 chr2 34870564 34870657 -215817197 + ERVL LTR ERVL 4490 4580 -1184 604 200 0 0 chr2 34870676 34870771 -215817083 - FRAM SINE Alu -28 148 54 863 260 145 32 chr2 34870772 34871207 -215816647 + ERVL LTR ERVL 4586 5069 -695 918 265 114 33 chr2 34871877 34872044 -215815810 + LTR67 LTR ERVL 169 321 -236 515 72 0 175 chr2 34872044 34872141 -215815713 + MADE1 DNA Mariner 1 80 0 918 265 114 33 chr2 34872141 34872332 -215815522 + LTR67 LTR ERVL 321 556 -1 218 215 0 31 chr2 34872415 34872480 -215815374 + (TTCA)n Simple_repeat Simple_repeat 2 64 0 621 335 133 27 chr2 34872480 34873239 -215814615 - L2 LINE L2 0 3313 2468 1594 219 71 40 chr2 34873510 34873963 -215813891 - MLT1C LTR MaLR 0 467 1 540 233 41 0 chr2 34874080 34874226 -215813628 - MER103 DNA DNA -4 162 11 1577 197 97 0 chr2 34875398 34875740 -215812114 + MSTB1 LTR MaLR 68 432 0 182 256 195 12 chr2 34876090 34876172 -215811682 - L3 LINE CR1 -6 1571 1475 24 32 0 0 chr2 34876271 34876302 -215811552 + AT_rich Low_complexity Low_complexity 1 31 0 432 0 0 0 chr2 34876563 34876611 -215811243 + (CA)n Simple_repeat Simple_repeat 2 49 0 1951 79 0 0 chr2 34876782 34877022 -215810832 + AluSc SINE Alu 56 295 -14 199 328 35 0 chr2 34877085 34877143 -215810711 - L2 LINE L2 0 3272 3213 2126 185 13 8 chr2 34877875 34878269 -215809585 - MER57A LTR ERV1 -1 402 7 209 254 30 90 chr2 34878320 34878387 -215809467 - L2 LINE L2 -54 3218 3156 206 216 0 0 chr2 34878466 34878503 -215809351 + polypurine Low_complexity Low_complexity 4 40 0 2225 110 0 3 chr2 34878764 34879065 -215808789 + AluSx SINE Alu 1 300 -12 3898 90 147 149 chr2 34881565 34882389 -215805465 - LTR12 LTR ERV1 0 826 5 2167 206 40 33 chr2 34882399 34883006 -215804848 - pTR5 LTR ERV1 -1087 1351 741 419 266 60 86 chr2 34883138 34883571 -215804283 + HAL1b LINE L1 69 490 -858 247 246 45 82 chr2 34883768 34883902 -215803952 + L1 LINE L1 2788 2916 -3230 712 251 14 106 chr2 34884106 34884147 -215803707 + L1ME3 LINE L1 5832 5875 -289 1993 143 3 3 chr2 34884147 34884448 -215803406 + AluSx SINE Alu 1 301 -11 712 251 14 106 chr2 34884448 34884773 -215803081 + L1ME3 LINE L1 5875 6164 0 314 153 0 14 chr2 34885662 34885762 -215802092 + MER53 DNA DNA 2 159 -30 214 159 0 72 chr2 34885991 34886060 -215801794 + A-rich Low_complexity Low_complexity 2 65 0 812 232 157 14 chr2 34886063 34886433 -215801421 + HAL1b LINE L1 400 822 -526 411 220 88 64 chr2 34886455 34886705 -215801149 + HAL1b LINE L1 888 1143 -205 238 186 0 51 chr2 34886767 34886826 -215801028 - L2 LINE L2 0 3313 3258 226 269 110 35 chr2 34886871 34886959 -215800895 + HAL1b LINE L1 1193 1298 -50 2409 94 0 0 chr2 34886959 34887266 -215800588 - AluY SINE Alu -4 307 1 226 269 110 35 chr2 34887266 34887322 -215800532 + HAL1b LINE L1 1298 1348 0 579 209 29 0 chr2 34887647 34887752 -215800102 - MLT1A1 LTR MaLR -255 110 3 979 254 142 43 chr2 34887804 34888322 -215799532 + L2 LINE L2 2751 3312 -1 304 238 52 12 chr2 34889006 34889133 -215798721 + L1ME LINE L1 5709 5842 -328 242 202 27 9 chr2 34889134 34889257 -215798597 + CT-rich Low_complexity Low_complexity 1 125 0 275 368 9 18 chr2 34889412 34889526 -215798328 + L2 LINE L2 2979 3091 -181 530 309 29 62 chr2 34893513 34893756 -215794098 + MIR SINE MIR 13 247 -15 1528 214 30 84 chr2 34894542 34895005 -215792849 + LTR16A LTR ERVL 6 443 -7 27 0 0 0 chr2 34895556 34895583 -215792271 + AT_rich Low_complexity Low_complexity 1 27 0 783 220 126 106 chr2 34895641 34895965 -215791889 - HAL1b LINE L1 0 1348 1007 10662 58 22 7 chr2 34895965 34897319 -215790535 + SVA Other Other 12 1386 0 783 220 126 106 chr2 34897319 34897549 -215790305 - HAL1b LINE L1 -341 1007 783 1445 288 60 12 chr2 34897549 34898032 -215789822 + MLT1J LTR MaLR 1 506 -5 418 201 30 79 chr2 34898069 34898233 -215789621 - HAL1b LINE L1 -569 779 624 2621 149 54 46 chr2 34898240 34898434 -215789420 - MLT1D LTR MaLR -2 503 312 2318 172 94 9 chr2 34898434 34898882 -215788972 + MER66B LTR ERV1 1 486 0 2621 149 54 46 chr2 34898882 34899184 -215788670 - MLT1D LTR MaLR -193 312 3 785 310 85 44 chr2 34899193 34899467 -215788387 - HAL1b LINE L1 -692 656 395 2507 55 3 10 chr2 34899467 34899779 -215788075 - AluY SINE Alu -1 310 1 785 310 85 44 chr2 34899779 34900068 -215787786 - HAL1b LINE L1 -953 395 70 2235 86 3 36 chr2 34900715 34901019 -215786835 + AluSx SINE Alu 9 302 -10 1184 255 94 19 chr2 34901019 34901387 -215786467 - MER69 DNA AcHobo -2 2524 2110 2015 120 28 0 chr2 34901387 34901671 -215786183 - AluSg SINE Alu -18 292 1 1184 255 94 19 chr2 34901671 34901781 -215786073 - MER69 DNA AcHobo -416 2110 2010 2273 240 48 7 chr2 34901787 34902324 -215785530 - MER69 DNA AcHobo -1967 559 1 945 216 63 151 chr2 34902688 34903256 -215784598 + LTR40a LTR ERVL 1 518 -1 1476 167 116 80 chr2 34903468 34903734 -215784120 + Charlie5 DNA MER1_type 1896 2151 -473 1006 199 0 6 chr2 34903734 34903900 -215783954 - FRAM SINE Alu -1 165 1 1476 167 116 80 chr2 34903900 34904056 -215783798 + Charlie5 DNA MER1_type 2151 2300 -324 1812 82 13 9 chr2 34904056 34904288 -215783566 + AluSq SINE Alu 1 233 -80 1476 167 116 80 chr2 34904288 34904326 -215783528 + Charlie5 DNA MER1_type 2300 2335 -289 2103 117 0 19 chr2 34904326 34904633 -215783221 + AluSg1 SINE Alu 1 301 -8 1476 167 116 80 chr2 34904633 34904852 -215783002 + Charlie5 DNA MER1_type 2335 2624 0 25 31 0 0 chr2 34904876 34904908 -215782946 + AT_rich Low_complexity Low_complexity 1 32 0 2331 103 0 7 chr2 34905034 34905344 -215782510 + AluSx SINE Alu 3 310 -2 722 309 81 27 chr2 34905355 34906512 -215781342 + L1M4 LINE L1 3117 4336 -1810 2086 133 0 3 chr2 34906628 34906928 -215780926 + AluSc SINE Alu 8 306 -3 1165 261 87 29 chr2 34906933 34907462 -215780392 - L2 LINE L2 -89 3224 2668 2690 104 3 5 chr2 34907462 34907838 -215780016 - THE1C LTR MaLR 0 375 1 1165 261 87 29 chr2 34907838 34907934 -215779920 - L2 LINE L2 -645 2668 2579 1644 285 149 14 chr2 34907936 34908662 -215779192 - L2 LINE L2 -1553 1761 938 2410 72 0 0 chr2 34908867 34909158 -215778696 - AluY SINE Alu -15 296 6 287 246 0 14 chr2 34909162 34909231 -215778623 + HAL1 LINE L1 770 837 -1670 2037 265 60 27 chr2 34909285 34910201 -215777653 + HAL1 LINE L1 970 1915 -592 1616 291 213 24 chr2 34910215 34911448 -215776406 - L2 LINE L2 -611 2703 1239 22 0 0 0 chr2 34911448 34911470 -215776384 + AT_rich Low_complexity Low_complexity 1 22 0 2778 120 38 12 chr2 34911470 34911981 -215775873 - L1MA2 LINE L1 -76 6228 5711 678 331 145 13 chr2 34911981 34912374 -215775480 - L2 LINE L2 -2096 1218 774 851 147 0 16 chr2 34912473 34912602 -215775252 - FLAM_C SINE Alu -16 127 1 31 0 0 0 chr2 34912689 34912720 -215775134 + AT_rich Low_complexity Low_complexity 1 31 0 474 153 183 8 chr2 34912880 34913011 -215774843 - L1MB3 LINE L1 -308 5866 5713 1443 201 3 7 chr2 34913024 34913322 -215774532 + L1MB3 LINE L1 5882 6178 -5 2065 73 0 8 chr2 34913383 34913643 -215774211 + AluSc SINE Alu 35 292 -17 189 0 0 0 chr2 34913650 34913671 -215774183 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2167 110 0 3 chr2 34914285 34914576 -215773278 + AluSc SINE Alu 1 290 -19 2029 92 68 81 chr2 34914826 34915195 -215772659 + THE1B LTR MaLR 1 364 0 325 319 109 29 chr2 34915708 34915846 -215772008 + MIR SINE MIR 3 151 -111 253 62 42 0 chr2 34915895 34915943 -215771911 + (TA)n Simple_repeat Simple_repeat 2 51 0 1662 97 5 0 chr2 34915948 34916165 -215771689 - AluY SINE Alu -93 218 1 579 276 136 59 chr2 34916166 34916542 -215771312 - L2 LINE L2 -154 3159 2771 864 166 0 14 chr2 34916562 34916707 -215771147 - FRAM SINE Alu -30 146 4 1266 253 106 13 chr2 34916711 34917234 -215770620 - L2 LINE L2 -522 2792 2128 1425 259 4 28 chr2 34917245 34917708 -215770146 + L1ME3 LINE L1 5461 5912 -250 2138 118 3 7 chr2 34917809 34918113 -215769741 + AluSx SINE Alu 4 306 -6 2746 155 79 219 chr2 34919048 34920551 -215767303 - MER52A LTR ERV1 0 1278 1 413 269 8 0 chr2 34920594 34920713 -215767141 - MER97a DNA MER1_type? -715 179 60 204 135 0 0 chr2 34920737 34920774 -215767080 + (CA)n Simple_repeat Simple_repeat 2 38 0 1969 108 3 28 chr2 34920811 34921098 -215766756 + AluSq SINE Alu 1 280 -33 1555 154 16 22 chr2 34921856 34921894 -215765960 + L1MA1 LINE L1 5275 5312 -979 2242 80 3 32 chr2 34921894 34922208 -215765646 + AluY SINE Alu 1 305 -6 1555 154 16 22 chr2 34922208 34922481 -215765373 + L1MA1 LINE L1 5312 5584 -707 5258 77 23 21 chr2 34922483 34922626 -215765228 + L1PA8 LINE L1 5373 5514 -658 2245 60 0 4 chr2 34922626 34922892 -215764962 + AluY SINE Alu 38 302 -9 5258 77 23 21 chr2 34922892 34923526 -215764328 + L1PA8 LINE L1 5514 6152 -20 1020 182 120 31 chr2 34923531 34924022 -215763832 + L1MA1 LINE L1 5576 6298 -4 412 134 30 0 chr2 34924057 34924124 -215763730 + Tigger2 DNA MER2_type 1 69 -2649 * 2429 136 48 19 chr2 34924114 34924324 -215763530 + Tigger2 DNA MER2_type 2273 2475 -243 2020 156 3 0 chr2 34924324 34924632 -215763222 - AluSx SINE Alu -2 310 2 2429 136 48 19 chr2 34924632 34924854 -215763000 + Tigger2 DNA MER2_type 2475 2718 0 613 206 82 0 chr2 34924854 34925024 -215762830 + L1MA8 LINE L1 6103 6286 -5 24 85 0 0 chr2 34925228 34925287 -215762567 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 34925964 34925985 -215761869 + AT_rich Low_complexity Low_complexity 1 21 0 199 328 78 17 chr2 34926745 34926861 -215760993 - L2 LINE L2 0 3272 3150 23 0 0 0 chr2 34926861 34926884 -215760970 + AT_rich Low_complexity Low_complexity 1 23 0 1430 137 0 19 chr2 34926884 34927096 -215760758 - AluSg/x SINE Alu -23 287 80 1278 109 0 11 chr2 34927095 34927269 -215760585 - AluSq SINE Alu -141 172 1 * 505 196 0 45 chr2 34927595 34927707 -215760147 + FAM SINE Alu 63 169 -16 285 303 155 0 chr2 34927713 34927868 -215759986 + L3 LINE CR1 597 775 -802 573 300 126 14 chr2 34927874 34928151 -215759703 + L2 LINE L2 3006 3313 0 255 366 146 8 chr2 34928331 34928577 -215759277 + L3 LINE CR1 914 1193 -384 1313 251 18 6 chr2 34928577 34928903 -215758951 + L1ME LINE L1 268 597 -5473 21 82 0 0 chr2 34929045 34929094 -215758760 + AT_rich Low_complexity Low_complexity 1 49 0 1705 148 34 0 chr2 34929330 34929593 -215758261 - AluSq SINE Alu -1 312 41 224 303 90 49 chr2 34930572 34930694 -215757160 + L2 LINE L2 2684 2810 -504 184 422 20 35 chr2 34930743 34930942 -215756912 + L2 LINE L2 2869 3064 -208 2032 71 0 8 chr2 34931344 34931598 -215756256 - AluY SINE Alu -16 295 44 30 0 0 0 chr2 34932201 34932231 -215755623 + AT_rich Low_complexity Low_complexity 1 30 0 829 262 74 4 chr2 34983420 34983691 -215704163 - L1ME3A LINE L1 -9 6161 5872 5678 226 41 34 chr2 34983754 34985531 -215702323 - L1ME3A LINE L1 -816 5330 3569 399 41 0 0 chr2 34985857 34985906 -215701948 + (TG)n Simple_repeat Simple_repeat 2 50 0 1719 268 29 34 chr2 34985944 34986556 -215701298 - MER90 LTR ERV1 -4 610 2 2334 50 13 35 chr2 34987770 34988088 -215699766 - AluY SINE Alu 0 311 1 914 231 42 73 chr2 34989168 34989454 -215698400 - LTR40a LTR ERVL -15 504 228 284 303 173 14 chr2 34989748 34989956 -215697898 - L1M4 LINE L1 -1955 4191 3951 2204 127 0 0 chr2 34990139 34990447 -215697407 + AluSp SINE Alu 1 308 -5 247 313 17 9 chr2 34990562 34990677 -215697177 - L1M4 LINE L1 -2455 3691 3576 7601 27 2 2 chr2 34990678 34991975 -215695879 - L1PA4 LINE L1 -3 6152 4855 479 171 45 0 chr2 34991975 34992063 -215695791 + AluJ/FLAM SINE Alu 9 100 -212 1399 201 61 0 chr2 34992245 34992361 -215695493 + AluJo SINE Alu 1 108 -204 186 43 0 0 chr2 34992361 34992384 -215695470 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1399 201 61 0 chr2 34992384 34992546 -215695308 + AluJo SINE Alu 108 296 -16 5111 150 50 4 chr2 34992750 34993906 -215693948 - L1PA15 LINE L1 0 6165 4963 22 0 0 0 chr2 34995469 34995491 -215692363 + AT_rich Low_complexity Low_complexity 1 22 0 247 227 163 35 chr2 34996457 34996598 -215691256 - MIR SINE MIR 0 262 104 470 244 64 39 chr2 34997666 34997822 -215690032 - MIR SINE MIR -12 250 91 22 56 0 0 chr2 34998220 34998256 -215689598 + AT_rich Low_complexity Low_complexity 1 36 0 303 277 35 21 chr2 34998772 34998913 -215688941 + (CATA)n Simple_repeat Simple_repeat 2 144 0 401 117 55 0 chr2 34999261 34999389 -215688465 + (TA)n Simple_repeat Simple_repeat 1 135 0 227 215 15 0 chr2 35000679 35000744 -215687110 + CT-rich Low_complexity Low_complexity 3 68 0 325 311 42 34 chr2 35000885 35001004 -215686850 - L2 LINE L2 0 3313 3194 272 366 18 0 chr2 35001264 35001376 -215686478 + HERVL LTR ERVL 3501 3614 -2040 347 358 81 32 chr2 35001470 35001616 -215686238 + HERVL LTR ERVL 3773 3910 -1854 2150 108 7 7 chr2 35001616 35001912 -215685942 + AluSc SINE Alu 1 296 -13 347 358 81 32 chr2 35001912 35002271 -215685583 + HERVL LTR ERVL 3910 4303 -1461 770 222 0 66 chr2 35002273 35002471 -215685383 + LTR41 LTR ERVL 8 192 -581 320 192 33 60 chr2 35002710 35002841 -215685013 + LTR41 LTR ERVL 660 794 -1 1756 209 113 20 chr2 35003015 35003459 -215684395 - MER67D LTR ERV1 -1 513 29 1242 167 193 36 chr2 35004111 35004500 -215683354 - LTR7 LTR ERV1 0 450 1 387 227 117 13 chr2 35005009 35005163 -215682691 + L1ME3A LINE L1 5974 6143 -27 959 158 84 65 chr2 35007176 35007391 -215680463 + MER20 DNA MER1_type 1 219 0 321 89 0 0 chr2 35007942 35007987 -215679867 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 5369 73 46 27 chr2 35008084 35008850 -215679004 + LTR17 LTR ERV1 1 780 0 396 270 163 20 chr2 35009650 35009846 -215678008 + MLT1J2 LTR MaLR 15 238 -212 229 329 0 0 chr2 35010052 35010128 -215677726 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 2268 64 10 7 chr2 35010161 35010457 -215677397 - AluY SINE Alu -14 297 1 260 318 9 19 chr2 35011434 35011541 -215676313 + MIR SINE MIR 101 206 -56 1460 303 98 22 chr2 35011572 35012384 -215675470 - L2 LINE L2 -13 3300 2424 601 200 0 73 chr2 35012814 35012964 -215674890 + Ricksha DNA DNA 758 896 -2350 361 285 42 12 chr2 35013022 35013187 -215674667 - L1M4 LINE L1 -3042 3340 3171 557 283 43 17 chr2 35013221 35013754 -215674100 - L1M4 LINE L1 -3806 2576 2025 2243 68 10 24 chr2 35015387 35015681 -215672173 + AluY SINE Alu 1 290 -21 1905 128 64 19 chr2 35016214 35016573 -215671281 - THE1C LTR MaLR 0 375 1 874 249 10 5 chr2 35017539 35017748 -215670106 + MER58A DNA MER1_type 10 219 -5 1697 128 3 96 chr2 35018399 35018786 -215669068 - AluJo SINE Alu 0 355 1 1724 184 54 20 chr2 35019443 35019850 -215668004 + L1MA8 LINE L1 5869 6289 -2 1302 202 174 3 chr2 35019964 35020315 -215667539 + LTR45B LTR ERV1 3 413 -76 387 0 0 0 chr2 35020737 35020780 -215667074 + (TA)n Simple_repeat Simple_repeat 2 44 0 2654 239 86 16 chr2 35020787 35021760 -215666094 + L1PBa LINE L1 6 1046 -5817 9755 217 24 13 chr2 35021763 35025721 -215662133 + L1PBa LINE L1 1093 5274 -1588 5091 107 10 5 chr2 35025710 35026502 -215661352 + L1PB1 LINE L1 5356 6151 0 * 1385 230 45 41 chr2 35026533 35026976 -215660878 - MER31B LTR ERV1 -21 445 1 2481 70 0 6 chr2 35028376 35028689 -215659165 - AluY SINE Alu 0 311 1 215 324 67 109 chr2 35028789 35029027 -215658827 - L2 LINE L2 -14 3258 3031 186 227 0 0 chr2 35029310 35029354 -215658500 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 354 321 78 64 chr2 35029433 35029841 -215658013 + L1M4 LINE L1 3365 3778 -2368 248 281 63 54 chr2 35029881 35030102 -215657752 + L1M4 LINE L1 3875 4097 -2049 437 327 77 13 chr2 35030121 35030421 -215657433 - L1MEd LINE L1 -4944 1175 857 225 234 0 0 chr2 35030892 35030939 -215656915 + MER69 DNA AcHobo 2477 2523 -3 335 181 14 0 chr2 35031178 35031250 -215656604 + (TA)n Simple_repeat Simple_repeat 2 74 0 1937 147 40 28 chr2 35031254 35031608 -215656246 - THE1B LTR MaLR -5 359 2 201 263 0 0 chr2 35031608 35031665 -215656189 + (TA)n Simple_repeat Simple_repeat 1 57 0 240 314 47 0 chr2 35032378 35032464 -215655390 + L3 LINE CR1 665 754 -823 199 325 61 26 chr2 35032634 35032748 -215655106 + L3 LINE CR1 1007 1124 -453 2349 119 13 24 chr2 35032765 35033143 -215654711 - THE1C LTR MaLR 0 375 2 303 263 13 0 chr2 35033551 35033627 -215654227 + L3 LINE CR1 1338 1414 -163 1594 202 3 18 chr2 35033874 35034206 -215653648 - MLT1A1 LTR MaLR -5 360 34 764 230 31 0 chr2 35035028 35035189 -215652665 - MER45A DNA AcHobo -12 166 1 376 174 22 11 chr2 35035653 35035745 -215652109 + GA-rich Low_complexity Low_complexity 4 96 0 23 54 0 0 chr2 35036233 35036270 -215651584 + AT_rich Low_complexity Low_complexity 1 37 0 2332 48 0 61 chr2 35036373 35036683 -215651171 + AluY SINE Alu 1 291 -20 1714 73 11 4 chr2 35038435 35038695 -215649159 - LTR7 LTR ERV1 -2 448 187 1330 72 0 0 chr2 35038696 35038877 -215648977 - HERVH LTR ERV1 -3045 4668 4488 3226 111 0 6 chr2 35038879 35039384 -215648470 - HERVH LTR ERV1 -3720 3993 3492 859 135 7 0 chr2 35039376 35039524 -215648330 - HERVH LTR ERV1 -4425 3288 3140 * 2307 110 0 18 chr2 35039518 35039899 -215647955 - HERVH LTR ERV1 -4726 2987 2614 2566 107 92 7 chr2 35039899 35040312 -215647542 + LTR7 LTR ERV1 1 448 -2 2976 131 2 2 chr2 35040314 35040788 -215647066 + HERVH LTR ERV1 1 474 -7239 6426 113 12 12 chr2 35040790 35041836 -215646018 + HERVH LTR ERV1 1942 2987 -4726 810 131 41 0 chr2 35041830 35041975 -215645879 + HERVH LTR ERV1 3140 3290 -4423 * 3125 119 0 6 chr2 35041965 35042470 -215645384 + HERVH LTR ERV1 3492 3993 -3720 1251 100 0 0 chr2 35042472 35042652 -215645202 + HERVH LTR ERV1 4488 4667 -3046 * 4073 90 2 0 chr2 35042648 35043259 -215644595 + HERVH LTR ERV1 5769 6380 -1333 * 7321 96 21 6 chr2 35043248 35044390 -215643464 + HERVH LTR ERV1 6551 7709 -4 11101 120 16 23 chr2 35044390 35046344 -215641510 - HERVH LTR ERV1 -5095 2618 491 2009 90 6 6 chr2 35046380 35046709 -215641145 - LTR7 LTR ERV1 -8 442 25 374 205 13 109 chr2 35047434 35047590 -215640264 + L1MA9 LINE L1 6143 6290 -8 665 126 11 153 chr2 35048288 35048478 -215639376 + AluY SINE Alu 136 298 -13 2889 112 18 30 chr2 35048486 35048786 -215639068 - L1P4 LINE L1 -408 5758 5465 2244 101 0 16 chr2 35048786 35049102 -215638752 + AluSx SINE Alu 1 311 -1 2889 112 18 30 chr2 35049102 35049308 -215638546 - L1P4 LINE L1 -701 5465 5258 2092 178 18 5 chr2 35049308 35049691 -215638163 + L1PA16 LINE L1 5759 6157 -9 216 274 0 0 chr2 35049720 35049771 -215638083 + CT-rich Low_complexity Low_complexity 2 52 0 26 50 0 0 chr2 35049786 35049826 -215638028 + AT_rich Low_complexity Low_complexity 1 40 0 2420 169 17 0 chr2 35050083 35050502 -215637352 + MSTC LTR MaLR 1 426 -2 271 233 63 75 chr2 35050535 35050583 -215637271 - L1MA10 LINE L1 -9 6325 6278 653 238 63 78 chr2 35050583 35050613 -215637241 - L1ME1 LINE L1 -44 6122 6093 180 0 0 0 chr2 35050613 35050633 -215637221 + (TA)n Simple_repeat Simple_repeat 1 20 0 653 238 63 78 chr2 35050633 35051001 -215636853 - L1ME1 LINE L1 -73 6093 5730 231 36 0 0 chr2 35051811 35051839 -215636015 + (TG)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 35052981 35053003 -215634851 + AT_rich Low_complexity Low_complexity 1 22 0 618 227 108 82 chr2 35053156 35053605 -215634249 - MER110A LTR ERV1 -2 466 26 207 0 0 0 chr2 35053666 35053689 -215634165 + (T)n Simple_repeat Simple_repeat 1 23 0 392 197 0 0 chr2 35053693 35053764 -215634090 + MER58 DNA MER1_type 129 2404 -16 2424 74 3 6 chr2 35054009 35054321 -215633533 - AluY SINE Alu 0 311 1 2454 184 64 2 chr2 35054941 35055426 -215632428 + MLT2B2 LTR ERVL 1 515 0 1163 173 53 4 chr2 35056282 35056507 -215631347 + MER46A DNA MER2_type 1 236 0 400 290 71 47 chr2 35058093 35058517 -215629337 - HAL1 LINE L1 -1004 1503 1070 255 93 0 0 chr2 35058831 35058874 -215628980 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 913 9 0 0 chr2 35058909 35059015 -215628839 - L1PA2 LINE L1 0 6155 6050 2105 99 7 7 chr2 35059016 35059299 -215628555 - AluSq SINE Alu -30 283 1 504 348 118 10 chr2 35060271 35060567 -215627287 + L3 LINE CR1 1239 1566 -11 21 36 0 0 chr2 35061228 35061256 -215626598 + AT_rich Low_complexity Low_complexity 1 28 0 1179 139 20 68 chr2 35061351 35061405 -215626449 + L1MA1 LINE L1 6003 6058 -244 2366 86 0 16 chr2 35061405 35061720 -215626134 + AluY SINE Alu 1 310 -1 1179 139 20 68 chr2 35061720 35061916 -215625938 + L1MA1 LINE L1 6058 6241 -61 433 230 80 16 chr2 35062361 35062548 -215625306 - L1ME3 LINE L1 -251 5911 5713 427 343 57 23 chr2 35062742 35063042 -215624812 - L1M4 LINE L1 -1338 4808 4499 733 83 0 0 chr2 35063214 35063310 -215624544 - Harlequin LTR ERV1 -6539 357 262 * 2712 98 5 0 chr2 35063305 35063683 -215624171 - Harlequin LTR ERV1 -6516 380 1 3727 57 43 0 chr2 35063683 35064153 -215623701 - LTR2B LTR ERV1 0 490 1 231 319 33 9 chr2 35064169 35064379 -215623475 - L1M4 LINE L1 -3457 2689 2475 10639 166 44 64 chr2 35064397 35065578 -215622276 - L1MA3 LINE L1 0 7724 6520 2319 90 16 16 chr2 35065578 35065889 -215621965 + AluSq SINE Alu 1 311 -2 10639 166 44 64 chr2 35065889 35067514 -215620340 - L1MA3 LINE L1 -1204 6520 4863 1134 138 0 33 chr2 35067514 35067695 -215620159 - AluSg/x SINE Alu -17 295 121 1374 156 148 11 chr2 35067697 35067960 -215619894 - AluSx SINE Alu -2 300 2 10639 166 44 64 chr2 35067960 35068756 -215619098 - L1MA3 LINE L1 -2862 4862 4021 8088 210 25 34 chr2 35068750 35069754 -215618100 - L1MA3 LINE L1 -4716 2849 1837 * 2657 90 20 0 chr2 35069754 35070111 -215617743 + THE1B LTR MaLR 1 364 0 8088 210 25 34 chr2 35070111 35071590 -215616264 - L1MA3 LINE L1 -5728 1837 16 300 250 56 19 chr2 35071703 35071863 -215615991 - L1M4 LINE L1 -3802 2344 2179 387 239 14 14 chr2 35072015 35072157 -215615697 + (TA)n Simple_repeat Simple_repeat 2 143 0 232 289 12 12 chr2 35072179 35072262 -215615592 + CT-rich Low_complexity Low_complexity 2 84 0 292 238 119 12 chr2 35072262 35072346 -215615508 - Charlie8 DNA MER1_type -2169 248 156 944 204 8 122 chr2 35072359 35072711 -215615143 - L1MD2 LINE L1 -13 6346 6035 258 296 14 99 chr2 35072756 35072898 -215614956 - Charlie8 DNA MER1_type -2284 133 4 432 333 29 34 chr2 35073493 35073697 -215614157 - MIR SINE MIR -19 243 41 1556 216 29 20 chr2 35074588 35074939 -215612915 - MLT1A1 LTR MaLR 0 365 12 21 0 0 0 chr2 35075139 35075160 -215612694 + AT_rich Low_complexity Low_complexity 1 21 0 200 271 42 0 chr2 35075401 35075497 -215612357 + (TA)n Simple_repeat Simple_repeat 2 101 0 423 222 16 95 chr2 35075500 35075626 -215612228 - MIR SINE MIR -57 205 90 211 224 0 20 chr2 35076057 35076106 -215611748 + (TATG)n Simple_repeat Simple_repeat 2 49 0 480 296 172 0 chr2 35076562 35076731 -215611123 + MIR SINE MIR 8 205 -57 429 302 47 51 chr2 35077498 35077713 -215610141 - MIR SINE MIR -21 241 28 1127 224 82 23 chr2 35078218 35078522 -215609332 - MLT1B LTR MaLR -66 324 3 223 366 122 23 chr2 35078652 35078873 -215608981 - MIR SINE MIR 0 262 20 27 29 0 0 chr2 35080779 35080813 -215607041 + AT_rich Low_complexity Low_complexity 1 34 0 1684 135 77 40 chr2 35081089 35081414 -215606440 + MER1B DNA MER1_type 1 337 0 310 148 0 0 chr2 35081858 35081912 -215605942 + L1ME4a LINE L1 5464 5517 -657 357 279 55 50 chr2 35082200 35082419 -215605435 + L1ME4a LINE L1 5767 5986 -135 196 161 0 0 chr2 35082722 35082753 -215605101 + MIR SINE MIR 118 148 -60 225 250 73 29 chr2 35082840 35082908 -215604946 - L2 LINE L2 -2 3270 3200 413 49 0 16 chr2 35083706 35083767 -215604087 + (TA)n Simple_repeat Simple_repeat 2 61 0 192 333 61 26 chr2 35083910 35084024 -215603830 - MIR3 SINE MIR -6 202 85 15475 51 6 1 chr2 35085242 35087952 -215599902 - L1PA5 LINE L1 0 6154 3419 472 33 0 0 chr2 35087952 35088013 -215599841 + L1P LINE L1 3044 3104 -3042 2090 111 7 3 chr2 35088032 35088321 -215599533 - AluSg SINE Alu -20 290 1 336 253 0 0 chr2 35089672 35089755 -215598099 - L1M4 LINE L1 -1273 4873 4791 1751 147 0 14 chr2 35089914 35090193 -215597661 + AluSg SINE Alu 33 307 -3 22 56 0 0 chr2 35091374 35091410 -215596444 + AT_rich Low_complexity Low_complexity 1 36 0 251 246 16 0 chr2 35092146 35092207 -215595647 - L1MC/D LINE L1 -2057 5751 5690 326 283 75 53 chr2 35092660 35092847 -215595007 + HAL1 LINE L1 2304 2494 -13 223 254 51 0 chr2 35092947 35093006 -215594848 + MIR SINE MIR 118 179 -83 374 69 17 0 chr2 35094122 35094180 -215593674 + (TG)n Simple_repeat Simple_repeat 2 60 0 201 135 54 0 chr2 35094181 35094218 -215593636 + T-rich Low_complexity Low_complexity 3 41 0 192 319 83 14 chr2 35094522 35094666 -215593188 + MIR SINE MIR 49 202 -60 1437 191 43 28 chr2 35094666 35094948 -215592906 + AluJo SINE Alu 1 286 -26 328 216 20 0 chr2 35094948 35095050 -215592804 + (TA)n Simple_repeat Simple_repeat 1 104 0 1707 199 44 0 chr2 35095265 35095586 -215592268 + MLT1A1 LTR MaLR 1 335 -30 667 152 0 0 chr2 35095580 35095685 -215592169 + MLT1A1 LTR MaLR 260 364 -1 * 2204 100 0 7 chr2 35095722 35096013 -215591841 - AluSc SINE Alu -19 290 2 5454 164 11 1 chr2 35096106 35096996 -215590858 + MER54A LTR ERVL 3 901 0 921 204 0 0 chr2 35097107 35097269 -215590585 + MER58B DNA MER1_type 176 337 -4 233 119 24 0 chr2 35097882 35097924 -215589930 + (TA)n Simple_repeat Simple_repeat 1 43 0 249 83 0 0 chr2 35098071 35098107 -215589747 + (TC)n Simple_repeat Simple_repeat 1 36 0 220 311 42 8 chr2 35098473 35098592 -215589262 + L2 LINE L2 47 169 -3145 984 269 231 43 chr2 35098599 35098967 -215588887 + L2 LINE L2 337 634 -2680 1762 134 22 51 chr2 35098967 35099281 -215588573 - AluSx SINE Alu -7 305 1 984 269 231 43 chr2 35099281 35099566 -215588288 + L2 LINE L2 634 1113 -2201 816 248 140 0 chr2 35100298 35100586 -215587268 + L1ME3A LINE L1 5569 5905 -265 484 239 102 44 chr2 35100596 35100801 -215587053 + L1ME3A LINE L1 5954 6170 0 183 129 0 0 chr2 35101663 35101694 -215586160 + (CA)n Simple_repeat Simple_repeat 1 31 0 2272 88 0 26 chr2 35101777 35102082 -215585772 - AluY SINE Alu -14 297 1 724 160 112 12 chr2 35102306 35102475 -215585379 - MER53 DNA DNA -3 186 1 269 313 148 17 chr2 35103134 35103425 -215584429 - MARNA DNA Mariner -15 571 243 1921 145 0 43 chr2 35103979 35104348 -215583506 + AluJb SINE Alu 1 355 0 659 178 123 0 chr2 35104620 35104766 -215583088 - L1MC2 LINE L1 -26 6318 6155 510 17 0 0 chr2 35104769 35104828 -215583026 + (T)n Simple_repeat Simple_repeat 1 59 0 3422 51 14 2 chr2 35105593 35106026 -215581828 + L1PA7 LINE L1 5713 6150 -4 824 268 27 58 chr2 35106178 35106351 -215581503 - AluJo SINE Alu -15 287 125 2300 109 0 0 chr2 35106351 35106653 -215581201 - AluSg1 SINE Alu -7 302 1 824 268 27 58 chr2 35106653 35106774 -215581080 - AluJo SINE Alu -177 125 2 357 259 88 41 chr2 35107153 35107323 -215580531 - MIR SINE MIR -1 261 84 26 0 0 0 chr2 35107930 35107956 -215579898 + AT_rich Low_complexity Low_complexity 1 26 0 2242 98 14 7 chr2 35108303 35108600 -215579254 + AluSg SINE Alu 1 299 -11 2308 106 7 0 chr2 35109347 35109650 -215578204 + AluSx SINE Alu 1 305 -7 317 305 34 45 chr2 35110793 35110970 -215576884 + MLT1J LTR MaLR 287 461 -50 1425 179 65 3 chr2 35112008 35112381 -215575473 + L1MC2 LINE L1 5734 6170 -174 2437 93 3 0 chr2 35112382 35112715 -215575139 + AluSq SINE Alu 1 334 0 10464 53 13 56 chr2 35112821 35114242 -215573612 - SVA Other Other 0 1386 27 472 345 49 40 chr2 35114247 35114996 -215572858 + MER65C-int LTR ERV1 4209 4871 0 1827 206 28 47 chr2 35114996 35115466 -215572388 + MER65C LTR ERV1 1 461 0 413 292 139 5 chr2 35116645 35116854 -215571000 + L1ME4a LINE L1 5662 5898 -223 1813 164 9 21 chr2 35117564 35117899 -215569955 - MER2 DNA MER2_type -14 331 1 302 165 13 63 chr2 35118586 35118665 -215569189 - MLT1H LTR MaLR -420 129 55 181 318 32 0 chr2 35119095 35119158 -215568696 - MIR SINE MIR -163 99 35 240 373 51 8 chr2 35121744 35121862 -215565992 + L2 LINE L2 3103 3225 -47 4867 103 12 120 chr2 35121863 35122785 -215565069 - LTR12 LTR ERV1 0 826 5 2448 149 76 24 chr2 35122801 35123378 -215564476 - pTR5 LTR ERV1 -1094 1344 738 803 188 0 0 chr2 35123941 35124074 -215563780 - FLAM_A SINE Alu 0 133 1 267 208 0 0 chr2 35124114 35124167 -215563687 - L2 LINE L2 0 3313 3261 627 250 144 55 chr2 35124458 35124829 -215563025 + MLT1C LTR MaLR 1 408 -59 186 43 0 0 chr2 35125190 35125213 -215562641 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2163 117 3 7 chr2 35126076 35126383 -215561471 + AluSx SINE Alu 1 306 -6 2741 156 79 219 chr2 35127318 35128821 -215559033 - MER52A LTR ERV1 0 1278 1 413 269 8 0 chr2 35128864 35128983 -215558871 - MER97c DNA MER1_type? -911 179 60 204 135 0 0 chr2 35129007 35129044 -215558810 + (CA)n Simple_repeat Simple_repeat 2 38 0 1969 108 3 28 chr2 35129081 35129368 -215558486 + AluSq SINE Alu 1 280 -33 1555 154 16 22 chr2 35130126 35130164 -215557690 + L1MA1 LINE L1 5275 5312 -979 2277 80 3 29 chr2 35130164 35130477 -215557377 + AluY SINE Alu 1 305 -6 1555 154 16 22 chr2 35130477 35130750 -215557104 + L1MA1 LINE L1 5312 5584 -707 5258 77 23 21 chr2 35130752 35130895 -215556959 + L1PA8 LINE L1 5373 5514 -658 2245 60 0 4 chr2 35130895 35131161 -215556693 + AluY SINE Alu 38 302 -9 5258 77 23 21 chr2 35131161 35131795 -215556059 + L1PA8 LINE L1 5514 6152 -20 1020 182 120 31 chr2 35131800 35132291 -215555563 + L1MA1 LINE L1 5576 6298 -4 412 134 30 0 chr2 35132326 35132393 -215555461 + Tigger2 DNA MER2_type 1 69 -2649 * 2429 136 48 19 chr2 35132383 35132593 -215555261 + Tigger2 DNA MER2_type 2273 2475 -243 2020 156 3 0 chr2 35132593 35132901 -215554953 - AluSx SINE Alu -2 310 2 2429 136 48 19 chr2 35132901 35133123 -215554731 + Tigger2 DNA MER2_type 2475 2718 0 613 206 82 0 chr2 35133123 35133293 -215554561 + L1MA8 LINE L1 6103 6286 -5 24 85 0 0 chr2 35133497 35133556 -215554298 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 35134233 35134254 -215553600 + AT_rich Low_complexity Low_complexity 1 21 0 199 328 78 17 chr2 35135014 35135130 -215552724 - L2 LINE L2 0 3272 3150 23 0 0 0 chr2 35135130 35135153 -215552701 + AT_rich Low_complexity Low_complexity 1 23 0 1430 137 0 19 chr2 35135153 35135365 -215552489 - AluSg/x SINE Alu -23 289 82 1278 109 0 11 chr2 35135364 35135538 -215552316 - AluSq SINE Alu -141 172 1 * 500 204 0 44 chr2 35135862 35135975 -215551879 + FAM SINE Alu 61 168 -17 285 303 155 0 chr2 35135981 35136136 -215551718 + L3 LINE CR1 597 775 -802 573 300 126 14 chr2 35136142 35136419 -215551435 + L2 LINE L2 3006 3313 0 255 366 146 8 chr2 35136599 35136845 -215551009 + L3 LINE CR1 914 1193 -384 1313 251 18 6 chr2 35136845 35137171 -215550683 + L1ME LINE L1 268 597 -5473 21 82 0 0 chr2 35137313 35137362 -215550492 + AT_rich Low_complexity Low_complexity 1 49 0 1705 148 34 0 chr2 35137598 35137861 -215549993 - AluSq SINE Alu -1 312 41 224 303 90 49 chr2 35138840 35138962 -215548892 + L2 LINE L2 2684 2810 -504 184 422 20 35 chr2 35139011 35139210 -215548644 + L2 LINE L2 2869 3064 -208 2032 71 0 8 chr2 35139612 35139866 -215547988 - AluY SINE Alu -16 295 44 30 0 0 0 chr2 35140469 35140499 -215547355 + AT_rich Low_complexity Low_complexity 1 30 0 378 0 0 0 chr2 35140912 35140954 -215546900 + (CA)n Simple_repeat Simple_repeat 1 42 0 286 340 31 53 chr2 35141495 35141813 -215546041 - MER102b DNA MER1_type -16 325 15 262 196 0 0 chr2 35142154 35142200 -215545654 + MER58B DNA MER1_type 292 337 -4 1641 170 40 34 chr2 35142248 35142601 -215545253 - MLT1A1 LTR MaLR -10 355 1 21 57 0 0 chr2 35143091 35143126 -215544728 + AT_rich Low_complexity Low_complexity 1 35 0 344 103 17 0 chr2 35143587 35143645 -215544209 + (TC)n Simple_repeat Simple_repeat 2 60 0 2272 91 0 11 chr2 35144174 35144502 -215543352 - AluY SINE Alu 0 326 2 28 0 0 0 chr2 35144505 35144533 -215543321 + AT_rich Low_complexity Low_complexity 1 28 0 1860 102 4 0 chr2 35144540 35144814 -215543040 - L1MA2 LINE L1 -8 6296 6022 21 57 0 0 chr2 35145341 35145376 -215542478 + AT_rich Low_complexity Low_complexity 1 35 0 1333 212 106 44 chr2 35145413 35145752 -215542102 + MLT1A1 LTR MaLR 6 365 0 497 307 35 25 chr2 35145968 35146170 -215541684 - MIR SINE MIR -34 228 25 299 250 115 48 chr2 35146325 35146429 -215541425 + MIR3 SINE MIR 88 198 -10 1764 158 16 9 chr2 35148516 35148838 -215539016 - L1MA7 LINE L1 -390 5901 5578 1555 176 45 21 chr2 35148838 35149140 -215538714 + L1MA7 LINE L1 5909 6225 -66 315 49 0 0 chr2 35149140 35149181 -215538673 + (TG)n Simple_repeat Simple_repeat 2 42 0 1555 176 45 21 chr2 35149181 35149250 -215538604 + L1MA7 LINE L1 6225 6291 0 27 0 0 0 chr2 35150330 35150357 -215537497 + AT_rich Low_complexity Low_complexity 1 27 0 2246 124 59 0 chr2 35151229 35151583 -215536271 - THE1C LTR MaLR 0 375 1 9546 118 53 4 chr2 35151583 35153089 -215534765 - THE1C-int LTR MaLR 0 1580 1 2425 108 44 8 chr2 35153089 35153451 -215534403 - THE1C LTR MaLR 0 375 1 1537 158 33 0 chr2 35153691 35153963 -215533891 - L1PA16 LINE L1 -22 6144 5864 1330 154 126 14 chr2 35154049 35154342 -215533512 + MER44D DNA MER2_type 1 596 -13 1237 188 19 13 chr2 35154348 35154663 -215533191 - MER33 DNA MER1_type -36 288 1 260 238 12 0 chr2 35155666 35155750 -215532104 + (CATATA)n Simple_repeat Simple_repeat 4 88 0 213 175 0 0 chr2 35155804 35155844 -215532010 + (TATATG)n Simple_repeat Simple_repeat 5 44 0 491 113 0 25 chr2 35155844 35155924 -215531930 - L1MC1 LINE L1 -5 6328 6251 198 268 18 36 chr2 35157413 35157469 -215530385 - MIR SINE MIR -201 61 7 1960 234 17 35 chr2 35157474 35158017 -215529837 - LTR31 LTR ERV1 -12 607 75 872 184 69 0 chr2 35159027 35159201 -215528653 - MER5A DNA MER1_type -3 186 1 492 214 61 0 chr2 35159206 35159304 -215528550 + MER5A DNA MER1_type 86 189 0 238 310 115 0 chr2 35159450 35159537 -215528317 - L2 LINE L2 -54 3218 3122 192 182 45 0 chr2 35159739 35159783 -215528071 - L2 LINE L2 -291 2981 2936 13721 148 24 12 chr2 35160393 35160451 -215527403 + Tigger1 DNA MER2_type 1 57 -2361 1839 162 0 3 chr2 35160451 35160753 -215527101 - AluSx SINE Alu -11 301 1 13721 148 24 12 chr2 35160753 35163082 -215524772 + Tigger1 DNA MER2_type 57 2417 -1 3616 105 2 2 chr2 35163227 35163752 -215524102 - L1P3 LINE L1 -1040 5106 4582 3007 78 22 0 chr2 35163750 35164315 -215523539 + L1P3 LINE L1 5099 5671 -483 * 4560 53 9 0 chr2 35164385 35164953 -215522901 + L1PA7 LINE L1 5561 6133 -21 1628 194 22 3 chr2 35164967 35165322 -215522532 + L1MA5 LINE L1 5939 6300 0 1926 61 0 8 chr2 35166654 35166900 -215520954 - AluY SINE Alu -12 299 56 392 300 106 44 chr2 35167688 35167915 -215519939 + MIR SINE MIR 9 249 -13 1887 181 56 42 chr2 35168109 35168484 -215519370 - MER47B DNA MER2_type -1908 415 32 188 67 33 0 chr2 35168484 35168514 -215519340 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1887 181 56 42 chr2 35168514 35168547 -215519307 - MER47B DNA MER2_type -2291 32 1 295 327 80 6 chr2 35169488 35169650 -215518204 - MLT1J1 LTR MaLR 0 446 273 * 302 213 40 0 chr2 35169648 35169723 -215518131 - MLT1J2 LTR MaLR -372 78 1 206 173 0 19 chr2 35169957 35170009 -215517845 + (TA)n Simple_repeat Simple_repeat 1 51 0 1668 237 104 16 chr2 35170275 35171466 -215516388 - L1MC4 LINE L1 -133 7909 6463 413 258 48 16 chr2 35172271 35172395 -215515459 - L2 LINE L2 0 3313 3186 2242 271 28 40 chr2 35173993 35174059 -215513795 + L1ME LINE L1 34 99 -5971 1973 149 10 3 chr2 35174059 35174354 -215513500 + AluSx SINE Alu 1 297 -15 2242 271 28 40 chr2 35174354 35175122 -215512732 + L1ME LINE L1 99 858 -5212 872 113 10 113 chr2 35175251 35175454 -215512400 - L1MA9 LINE L1 0 6312 6131 180 111 0 0 chr2 35175671 35175698 -215512156 + (GGAGAA)n Simple_repeat Simple_repeat 1 27 0 286 261 163 22 chr2 35175704 35175796 -215512058 + L2 LINE L2 3202 3306 -7 1623 176 7 10 chr2 35175796 35176086 -215511768 + AluJo SINE Alu 1 289 -23 207 214 0 0 chr2 35176094 35176136 -215511718 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 388 332 53 29 chr2 35176672 35176916 -215510938 - MLT1K LTR MaLR -17 571 322 180 152 0 0 chr2 35177192 35177225 -215510629 + GA-rich Low_complexity Low_complexity 2 34 0 639 282 64 46 chr2 35177269 35177549 -215510305 + LTR16A1 LTR ERVL 168 452 -5 243 0 0 0 chr2 35177731 35177758 -215510096 + (T)n Simple_repeat Simple_repeat 1 27 0 8407 123 12 8 chr2 35178233 35179314 -215508540 + HSMAR2 DNA Mariner 2 1090 -212 2500 105 28 22 chr2 35179314 35179676 -215508178 + THE1B LTR MaLR 1 364 0 8407 123 12 8 chr2 35179676 35179889 -215507965 + HSMAR2 DNA Mariner 1090 1301 -1 235 333 75 17 chr2 35180332 35180452 -215507402 + L2 LINE L2 3143 3269 -3 223 263 36 57 chr2 35180574 35180676 -215507178 - MIR SINE MIR -91 117 19 22 0 0 0 chr2 35181062 35181084 -215506770 + AT_rich Low_complexity Low_complexity 1 22 0 2138 149 92 20 chr2 35181380 35181783 -215506071 + MSTB1 LTR MaLR 1 432 0 194 382 0 0 chr2 35182128 35182204 -215505650 + L3 LINE CR1 188 263 -1314 183 376 24 0 chr2 35182515 35182600 -215505254 - MER5B DNA MER1_type -4 174 88 904 284 120 40 chr2 35183410 35183885 -215503969 + LTR33A LTR ERVL 11 523 0 5060 127 21 4 chr2 35183937 35184727 -215503127 - L1PA15 LINE L1 -8 6157 5354 307 322 147 17 chr2 35184890 35185067 -215502787 + MIR SINE MIR 53 252 -10 649 270 38 6 chr2 35185892 35186051 -215501803 - MER45A DNA AcHobo 0 178 15 217 131 66 49 chr2 35186346 35186407 -215501447 + A-rich Low_complexity Low_complexity 1 62 0 3846 207 45 17 chr2 35186438 35187382 -215500472 + L1PA13 LINE L1 1 1009 -5778 15214 167 12 13 chr2 35187382 35187605 -215500249 + L1PA13 LINE L1 2903 3125 -3689 357 109 0 0 chr2 35187605 35187660 -215500194 + (CA)n Simple_repeat Simple_repeat 2 56 0 15214 167 12 13 chr2 35187660 35190406 -215497448 + L1PA13 LINE L1 3125 5895 -919 5360 151 34 35 chr2 35190406 35191478 -215496376 - MER11C LTR ERVK 0 1071 1 15214 167 12 13 chr2 35191478 35192397 -215495457 + L1PA13 LINE L1 5895 6814 0 744 285 169 56 chr2 35192628 35193094 -215494760 - MLT2E LTR ERVL -100 528 10 1674 196 50 3 chr2 35193550 35193928 -215493926 + L1MA8 LINE L1 5895 6290 -1 428 323 104 30 chr2 35194018 35194421 -215493433 + L1ME LINE L1 4931 5363 -783 270 312 123 28 chr2 35194434 35194751 -215493103 + L1ME LINE L1 5383 5729 -435 253 246 0 0 chr2 35194872 35194929 -215492925 + (TA)n Simple_repeat Simple_repeat 1 57 0 26 30 0 0 chr2 35195253 35195286 -215492568 + AT_rich Low_complexity Low_complexity 1 33 0 354 45 0 0 chr2 35196462 35196506 -215491348 + (TG)n Simple_repeat Simple_repeat 2 45 0 243 336 114 7 chr2 35196654 35196803 -215491051 + LTR16C LTR ERVL 327 491 0 482 333 40 17 chr2 35197890 35198064 -215489790 + MIR SINE MIR 2 179 -83 1443 67 0 0 chr2 35198086 35198265 -215489589 + L1PA7 LINE L1 5963 6141 -13 527 296 82 19 chr2 35198469 35198675 -215489179 + MIR SINE MIR 9 227 -35 4044 223 60 16 chr2 35198677 35198795 -215489059 + MER45B DNA AcHobo 4 115 -1466 2171 104 0 13 chr2 35198795 35199094 -215488760 - AluSg1 SINE Alu -14 295 1 4044 223 60 16 chr2 35199094 35199968 -215487886 + MER45B DNA AcHobo 115 1040 0 215 260 0 0 chr2 35199990 35200040 -215487814 + (TA)n Simple_repeat Simple_repeat 1 50 0 21 36 0 0 chr2 35201324 35201352 -215486502 + AT_rich Low_complexity Low_complexity 1 28 0 450 308 184 31 chr2 35201394 35201519 -215486335 + L2 LINE L2 2791 2895 -418 4783 51 2 0 chr2 35201519 35202110 -215485744 + L1PA7 LINE L1 5561 6152 -2 450 308 184 31 chr2 35202110 35202407 -215485447 + L2 LINE L2 2895 3276 -37 258 157 78 0 chr2 35202816 35202867 -215484987 + L2 LINE L2 3191 3245 -68 236 263 40 0 chr2 35202868 35202944 -215484910 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 286 253 182 0 chr2 35203716 35203815 -215484039 + MIR SINE MIR 46 162 -100 523 242 25 10 chr2 35203816 35203954 -215483900 + MLT1A2 LTR MaLR 1 107 -258 * 793 216 10 21 chr2 35203944 35204123 -215483731 + MLT1A2 LTR MaLR 223 370 -4 2361 302 107 21 chr2 35204234 35204444 -215483410 - L2 LINE L2 0 3313 3123 2034 121 16 38 chr2 35204444 35204758 -215483096 - AluSx SINE Alu -5 307 1 2361 302 107 21 chr2 35204758 35205570 -215482284 - L2 LINE L2 -190 3123 2145 884 209 67 24 chr2 35205570 35205780 -215482074 + MER20 DNA MER1_type 1 219 0 2361 302 107 21 chr2 35205780 35206170 -215481684 - L2 LINE L2 -1168 2145 1790 253 293 98 8 chr2 35206425 35206558 -215481296 + LTR16A1 LTR ERVL 92 236 -221 507 309 144 27 chr2 35206639 35206895 -215480959 - MLT1J LTR MaLR -200 311 26 186 347 40 0 chr2 35206923 35206998 -215480856 + L2 LINE L2 3186 3263 -9 244 325 198 6 chr2 35207062 35207219 -215480635 - MIR SINE MIR -64 198 12 1891 179 47 34 chr2 35208275 35208684 -215479170 + MLT2D LTR ERVL 1 414 0 303 334 53 3 chr2 35208872 35209005 -215478849 - MIR SINE MIR -52 156 20 255 31 0 0 chr2 35209816 35209848 -215478006 + (CA)n Simple_repeat Simple_repeat 2 33 0 326 306 106 12 chr2 35210527 35210687 -215477167 + MIR3 SINE MIR 9 183 -25 322 250 105 40 chr2 35210861 35210985 -215476869 + MIR SINE MIR 128 259 -3 779 191 0 0 chr2 35211557 35211693 -215476161 - FRAM SINE Alu -17 159 24 668 324 68 22 chr2 35211702 35211757 -215476097 - L1MC4a LINE L1 -1915 5893 5842 1463 258 94 43 chr2 35211757 35212320 -215475534 + MLT1G1 LTR MaLR 4 595 0 668 324 68 22 chr2 35212320 35212804 -215475050 - L1MC4a LINE L1 -1966 5842 5329 247 263 45 0 chr2 35213055 35213188 -215474666 + (TA)n Simple_repeat Simple_repeat 2 140 0 21 0 0 0 chr2 35213241 35213262 -215474592 + AT_rich Low_complexity Low_complexity 1 21 0 235 229 0 62 chr2 35213423 35213519 -215474335 - L1MC4a LINE L1 -2202 3944 3855 473 333 52 10 chr2 35214164 35214473 -215473381 - HAL1 LINE L1 -773 1734 1413 644 156 94 99 chr2 35215393 35215585 -215472269 - MER45B DNA AcHobo -2 1038 848 1989 213 77 22 chr2 35215684 35216127 -215471727 - MER45B DNA AcHobo -184 856 439 1924 182 40 0 chr2 35216127 35216478 -215471376 - MLT1A1 LTR MaLR 0 365 1 1989 213 77 22 chr2 35216478 35216693 -215471161 - MER45B DNA AcHobo -601 439 237 2217 117 14 25 chr2 35216693 35217052 -215470802 + THE1A LTR MaLR 1 355 0 11860 87 6 2 chr2 35217052 35218626 -215469228 + THE1A-int LTR MaLR 1 1580 0 2310 117 20 6 chr2 35218626 35218976 -215468878 + THE1A LTR MaLR 1 355 0 1989 213 77 22 chr2 35218976 35219068 -215468786 - MER45B DNA AcHobo -802 238 1 393 249 249 0 chr2 35219313 35219486 -215468368 + MIR SINE MIR 47 262 0 24 0 0 0 chr2 35219682 35219706 -215468148 + AT_rich Low_complexity Low_complexity 1 24 0 273 221 0 0 chr2 35219846 35219914 -215467940 + (TA)n Simple_repeat Simple_repeat 1 68 0 1049 171 65 28 chr2 35221332 35221549 -215466305 + AluJo SINE Alu 87 311 -1 392 244 146 0 chr2 35221571 35221694 -215466160 + MIR SINE MIR 51 191 -71 1732 171 68 3 chr2 35221995 35222317 -215465537 - MER2 DNA MER2_type 0 344 2 218 181 24 121 chr2 35222371 35222454 -215465400 - MIR3 SINE MIR -132 76 2 372 138 0 0 chr2 35223543 35223608 -215464246 + (CA)n Simple_repeat Simple_repeat 2 66 0 210 218 177 65 chr2 35223645 35223769 -215464085 - L2 LINE L2 -2 3311 3174 2244 122 0 0 chr2 35223773 35224076 -215463778 + AluJb SINE Alu 1 303 -9 23 54 0 0 chr2 35225369 35225406 -215462448 + AT_rich Low_complexity Low_complexity 1 37 0 2985 209 27 2 chr2 35225649 35226234 -215461620 - MER77 LTR ERV1 -3 602 3 522 349 60 13 chr2 35228555 35228787 -215459067 + MIR SINE MIR 7 249 -13 1547 219 61 73 chr2 35229184 35229756 -215458098 - L1M4 LINE L1 -5354 1188 624 665 258 65 24 chr2 35229999 35230247 -215457607 - L1M4 LINE L1 -6276 266 9 265 389 36 67 chr2 35230532 35231066 -215456788 - L2 LINE L2 0 3272 2758 348 24 0 0 chr2 35231420 35231461 -215456393 + (TC)n Simple_repeat Simple_repeat 2 42 0 344 190 13 0 chr2 35231461 35231540 -215456314 + (TA)n Simple_repeat Simple_repeat 2 81 0 21 0 0 0 chr2 35232218 35232239 -215455615 + AT_rich Low_complexity Low_complexity 1 21 0 184 221 59 59 chr2 35232597 35232665 -215455189 - MIR SINE MIR -50 212 145 369 232 5 187 chr2 35232854 35232973 -215454881 + MER5B DNA MER1_type 17 89 -89 2228 82 0 4 chr2 35232973 35233281 -215454573 - AluSc SINE Alu 0 307 1 369 232 5 187 chr2 35233281 35233358 -215454496 + MER5B DNA MER1_type 89 178 0 194 284 95 14 chr2 35233579 35233653 -215454201 - MIR SINE MIR -109 153 74 512 267 153 20 chr2 35233767 35233917 -215453937 + MER5A DNA MER1_type 14 183 -6 36 0 0 0 chr2 35234198 35234234 -215453620 + AT_rich Low_complexity Low_complexity 1 36 0 618 123 35 0 chr2 35234234 35234405 -215453449 + (TA)n Simple_repeat Simple_repeat 1 177 0 21 0 0 0 chr2 35234405 35234426 -215453428 + AT_rich Low_complexity Low_complexity 1 21 0 248 391 62 6 chr2 35235403 35235582 -215452272 + MIR3 SINE MIR 20 208 0 256 313 26 9 chr2 35235615 35235730 -215452124 - L2 LINE L2 -1044 2270 2154 21 89 0 0 chr2 35236038 35236094 -215451760 + AT_rich Low_complexity Low_complexity 1 56 0 781 170 17 37 chr2 35237802 35237975 -215449879 + MLT1A1 LTR MaLR 199 396 0 2358 82 0 0 chr2 35238000 35238291 -215449563 + AluY SINE Alu 1 291 -20 2108 133 0 3 chr2 35238444 35238752 -215449102 + AluSx SINE Alu 1 307 -5 451 245 0 0 chr2 35238758 35238852 -215449002 + Charlie1 DNA MER1_type 2666 2759 -2 339 270 78 17 chr2 35239195 35239310 -215448544 + L2 LINE L2 3190 3311 -2 510 295 34 29 chr2 35240573 35240780 -215447074 - MIR SINE MIR -6 256 49 930 121 0 61 chr2 35240859 35241024 -215446830 - MER1B DNA MER1_type 0 339 185 729 203 7 0 chr2 35241026 35241169 -215446685 + L1P LINE L1 4513 4656 -1490 3318 211 78 6 chr2 35241289 35242909 -215444945 + L1PBa LINE L1 115 1996 -4867 12040 215 21 13 chr2 35242930 35246152 -215441702 + L1PBa LINE L1 2329 5559 -1303 544 332 57 34 chr2 35246843 35247304 -215440550 + L2 LINE L2 2712 3184 -129 928 205 0 0 chr2 35247326 35247497 -215440357 + MER1B DNA MER1_type 1 171 -126 5017 229 28 20 chr2 35247497 35248345 -215439509 - L1PA15-16 LINE L1 -2427 4422 3582 1790 167 7 0 chr2 35248345 35248668 -215439186 + AluJb SINE Alu 5 329 0 5017 229 28 20 chr2 35248668 35249493 -215438361 - L1PA15-16 LINE L1 -3267 3582 2729 1353 253 72 36 chr2 35249478 35250386 -215437468 - L1ME LINE L1 -370 6292 5346 * 936 247 47 30 chr2 35250405 35250705 -215437149 + L1MCb LINE L1 1 305 -5740 564 178 0 45 chr2 35250706 35250840 -215437014 + L1ME LINE L1 5381 5507 -655 2497 232 77 28 chr2 35250897 35251998 -215435856 + L1MCb LINE L1 338 1483 -4851 432 237 61 15 chr2 35251994 35252125 -215435729 + L1MC2 LINE L1 6181 6317 -27 * 369 306 19 13 chr2 35252189 35252346 -215435508 - L1ME LINE L1 -4640 2185 2028 293 293 71 11 chr2 35252402 35252641 -215435213 - L1ME LINE L1 -4832 1710 1489 269 361 30 6 chr2 35253263 35253432 -215434422 - L1ME LINE L1 -6034 791 619 257 364 83 8 chr2 35253665 35253786 -215434068 - L2 LINE L2 0 3272 3143 226 370 52 32 chr2 35254661 35254815 -215433039 - L2 LINE L2 -4 3268 3112 711 247 18 12 chr2 35254869 35255039 -215432815 - MIR SINE MIR -57 205 35 276 343 12 47 chr2 35255583 35255755 -215432099 - MIR SINE MIR -56 206 41 200 167 0 0 chr2 35255756 35255786 -215432068 + polypyrimidine Low_complexity Low_complexity 2 31 0 286 360 94 23 chr2 35256466 35256946 -215430908 - L2 LINE L2 -809 2505 1992 2116 117 0 0 chr2 35257889 35258203 -215429651 + AluSx SINE Alu 1 314 0 226 208 19 38 chr2 35258580 35258633 -215429221 + L2 LINE L2 3236 3287 -26 315 0 0 0 chr2 35258651 35258686 -215429168 + (TG)n Simple_repeat Simple_repeat 2 36 0 1360 194 51 11 chr2 35259128 35259478 -215428376 + MER69 DNA AcHobo 2161 2524 -2 217 0 29 29 chr2 35259665 35259699 -215428155 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 442 308 31 36 chr2 35259740 35259935 -215427919 + MIR SINE MIR 14 207 -55 2272 145 28 14 chr2 35260069 35260428 -215427426 - THE1B LTR MaLR 0 364 1 2403 66 0 10 chr2 35263155 35263457 -215424397 - AluY SINE Alu -12 299 1 667 288 25 10 chr2 35264133 35264331 -215423523 - MIR SINE MIR -3 259 59 207 0 0 0 chr2 35264590 35264613 -215423241 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 244 47 23 23 chr2 35264882 35264925 -215422929 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1782 169 0 10 chr2 35264935 35265225 -215422629 - AluJo SINE Alu -25 287 1 2760 66 0 8 chr2 35265302 35265665 -215422189 - L1PA13 LINE L1 -19 6144 5785 929 258 73 21 chr2 35265711 35266137 -215421717 - L1M4 LINE L1 -2164 3982 3535 430 262 86 64 chr2 35266287 35266600 -215421254 - L1M4 LINE L1 -2652 3494 3175 372 253 116 47 chr2 35268094 35268284 -215419570 + L2 LINE L2 3109 3311 -2 600 273 44 34 chr2 35268460 35268665 -215419189 - MER63A DNA MER1_type 0 210 4 2180 116 0 0 chr2 35269359 35269652 -215418202 + AluSq SINE Alu 1 293 -20 2078 116 7 0 chr2 35269952 35270236 -215417618 + AluSp SINE Alu 3 288 -25 261 282 129 0 chr2 35270490 35270575 -215417279 + MIR SINE MIR 59 154 -108 614 272 0 0 chr2 35270657 35270793 -215417061 - MIR SINE MIR -88 174 39 251 376 10 0 chr2 35271796 35271897 -215415957 + L1MEd LINE L1 622 723 -5482 409 288 83 72 chr2 35271941 35272474 -215415380 + L1MEd LINE L1 790 1287 -4918 353 274 43 70 chr2 35272490 35272710 -215415144 + L1MEd LINE L1 1300 1524 -4691 180 0 0 0 chr2 35272710 35272730 -215415124 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 453 36 0 0 chr2 35272729 35272784 -215415070 + (CA)n Simple_repeat Simple_repeat 1 55 0 353 274 43 70 chr2 35272730 35272936 -215414918 + L1MEd LINE L1 1524 1662 -4553 247 157 20 0 chr2 35273173 35273224 -215414630 + L1MEd LINE L1 2030 2081 -4315 310 286 12 0 chr2 35273225 35273309 -215414545 + (TA)n Simple_repeat Simple_repeat 2 86 0 477 331 22 7 chr2 35273837 35274106 -215413748 + L1M4 LINE L1 4906 5178 -968 406 324 175 16 chr2 35275063 35275372 -215412482 - L2 LINE L2 0 3313 2956 407 280 198 37 chr2 35275425 35275668 -215412186 - L2 LINE L2 -459 2855 2574 267 218 69 30 chr2 35277140 35277241 -215410613 - L1ME LINE L1 -239 5882 5778 309 340 43 21 chr2 35277261 35277449 -215410405 - MIR SINE MIR -18 244 53 2179 60 0 4 chr2 35277757 35278023 -215409831 - AluY SINE Alu -12 299 35 321 321 36 9 chr2 35278538 35278650 -215409204 - HAL1b LINE L1 -673 675 561 254 95 24 0 chr2 35279014 35279056 -215408798 + (TA)n Simple_repeat Simple_repeat 2 44 0 337 302 39 123 chr2 35279339 35279746 -215408108 - L2 LINE L2 0 3313 2941 6739 56 26 0 chr2 35280115 35281041 -215406813 + L1PA6 LINE L1 5203 6151 -3 2127 120 7 3 chr2 35281283 35281583 -215406271 + AluSx SINE Alu 1 301 -11 1148 153 31 0 chr2 35281639 35281835 -215406019 - Tigger3b DNA MER2_type -751 480 279 2425 133 77 12 chr2 35281840 35282245 -215405609 + MSTB1 LTR MaLR 2 432 0 1437 181 25 25 chr2 35282247 35282529 -215405325 - Tigger3b DNA MER2_type -949 282 1 706 224 58 5 chr2 35282529 35282734 -215405120 - L1ME2 LINE L1 -262 5902 5687 196 241 19 74 chr2 35283769 35283823 -215404031 + L2 LINE L2 3189 3239 -74 2037 156 47 3 chr2 35283833 35284198 -215403656 - L1PB4 LINE L1 -12 6144 5764 189 74 0 0 chr2 35284753 35284780 -215403074 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 444 324 59 13 chr2 35286280 35286518 -215401336 + HERV16 LTR ERVL 1106 1354 -3642 532 341 75 42 chr2 35286537 35287138 -215400716 + HERV16 LTR ERVL 1481 2101 -3553 288 310 177 0 chr2 35287241 35287399 -215400455 + LTR16A1 LTR ERVL 266 451 -6 207 0 0 0 chr2 35288249 35288272 -215399582 + (TG)n Simple_repeat Simple_repeat 1 23 0 241 254 14 14 chr2 35288272 35288336 -215399518 + GA-rich Low_complexity Low_complexity 6 72 0 696 284 121 26 chr2 35288768 35289081 -215398773 + MLT1J LTR MaLR 3 345 -166 5101 24 2 2 chr2 35289098 35289723 -215398131 - L1PA3 LINE L1 -752 5394 4770 6316 27 21 0 chr2 35289723 35290461 -215397393 + L1PA3 LINE L1 5397 6155 0 2140 111 3 10 chr2 35290868 35291166 -215396688 - AluSq SINE Alu -17 296 1 23 0 0 0 chr2 35291284 35291307 -215396547 + AT_rich Low_complexity Low_complexity 1 23 0 239 340 0 11 chr2 35291709 35291803 -215396051 + A-rich Low_complexity Low_complexity 4 96 0 269 151 19 0 chr2 35292553 35292606 -215395248 + (TG)n Simple_repeat Simple_repeat 2 55 0 491 317 56 6 chr2 35292832 35293012 -215394842 - MIR SINE MIR -51 211 23 792 184 87 94 chr2 35293013 35293353 -215394501 + L1MC3 LINE L1 6762 7103 -682 240 246 0 0 chr2 35293353 35293410 -215394444 + MLT1F1 LTR MaLR 35 91 -476 2389 83 0 10 chr2 35293410 35293722 -215394132 + AluSc SINE Alu 1 309 0 792 184 87 94 chr2 35293722 35294218 -215393636 + L1MC3 LINE L1 7101 7776 -9 1858 108 0 8 chr2 35294667 35294926 -215392928 - AluSq SINE Alu 0 313 57 184 290 10 80 chr2 35295462 35295562 -215392292 + MIR SINE MIR 120 212 -50 3190 177 38 11 chr2 35295653 35296280 -215391574 + LTR48B LTR ERV1 1 644 0 223 304 43 54 chr2 35298609 35298701 -215389153 + L2 LINE L2 3196 3286 -27 2440 82 0 0 chr2 35299157 35299462 -215388392 - AluY SINE Alu -6 305 1 204 40 0 0 chr2 35300057 35300082 -215387772 + (TG)n Simple_repeat Simple_repeat 2 26 0 24 0 0 0 chr2 35300731 35300755 -215387099 + AT_rich Low_complexity Low_complexity 1 24 0 2472 77 0 10 chr2 35300866 35301178 -215386676 - AluSc SINE Alu 0 309 1 1824 76 4 12 chr2 35302603 35302853 -215385001 + L1PA7 LINE L1 5906 6153 -1 198 0 0 0 chr2 35303040 35303062 -215384792 + (T)n Simple_repeat Simple_repeat 1 22 0 196 333 26 87 chr2 35303871 35304066 -215383788 - MIR3 SINE MIR -10 198 16 291 300 28 9 chr2 35304775 35304901 -215382953 + CT-rich Low_complexity Low_complexity 2 220 0 466 318 94 79 chr2 35304943 35305346 -215382508 + L2 LINE L2 1937 2332 -982 531 178 54 23 chr2 35305346 35305475 -215382379 + MER94 DNA DNA 2 134 0 466 318 94 79 chr2 35305475 35305897 -215381957 + L2 LINE L2 2332 2775 -539 25 31 0 0 chr2 35306075 35306107 -215381747 + AT_rich Low_complexity Low_complexity 1 32 0 230 234 47 16 chr2 35306896 35306960 -215380894 + MIR SINE MIR 20 85 -177 258 180 0 0 chr2 35307785 35307846 -215380008 + (TG)n Simple_repeat Simple_repeat 1 61 0 729 301 106 43 chr2 35308726 35309578 -215378276 + L2 LINE L2 2358 3275 -38 359 298 116 9 chr2 35311052 35311191 -215376663 - MIR SINE MIR -74 188 37 2386 69 3 7 chr2 35311591 35311897 -215375957 - AluY SINE Alu -6 305 1 327 266 0 0 chr2 35311978 35312091 -215375763 + (TG)n Simple_repeat Simple_repeat 1 113 0 407 304 0 0 chr2 35312802 35312894 -215374960 + MIR SINE MIR 1 92 -170 402 311 8 0 chr2 35313346 35313465 -215374389 + MER5A DNA MER1_type 4 123 -66 260 246 0 0 chr2 35313557 35313614 -215374240 + Charlie7 DNA MER1_type 38 94 -2518 270 85 51 17 chr2 35313700 35313759 -215374095 + (CATA)n Simple_repeat Simple_repeat 2 62 0 5112 89 18 5 chr2 35313772 35314514 -215373340 + L1MA1 LINE L1 5548 6298 -4 26 0 0 0 chr2 35314514 35314540 -215373314 + AT_rich Low_complexity Low_complexity 1 26 0 398 210 65 0 chr2 35315507 35315631 -215372223 + L1ME2 LINE L1 4453 4584 -1562 1874 184 35 11 chr2 35315998 35316374 -215371480 - MLT1B LTR MaLR 0 390 6 993 243 15 26 chr2 35316461 35316733 -215371121 + MLT1C LTR MaLR 15 283 -184 756 254 137 19 chr2 35316734 35317100 -215370754 + L1ME2 LINE L1 4688 5096 -1050 2239 233 61 48 chr2 35317108 35317897 -215369957 + L1ME2 LINE L1 5348 6146 -18 1226 165 65 4 chr2 35317932 35318162 -215369692 + L1MB5 LINE L1 464 707 -6782 2206 109 0 0 chr2 35318576 35318870 -215368984 + AluSc SINE Alu 1 294 -15 22 0 0 0 chr2 35319241 35319263 -215368591 + AT_rich Low_complexity Low_complexity 1 22 0 1261 205 54 37 chr2 35320550 35321120 -215366734 + L1MB5 LINE L1 3362 3941 -3624 * 4001 194 30 21 chr2 35321117 35321349 -215366505 + L1MB5 LINE L1 6427 6655 -938 1776 155 43 25 chr2 35321349 35321717 -215366137 - THE1C LTR MaLR 0 375 1 4001 194 30 21 chr2 35321717 35322587 -215365267 + L1MB5 LINE L1 6655 7542 -51 1414 275 78 5 chr2 35322759 35323185 -215364669 + LTR16B LTR ERVL 8 464 0 21 0 0 0 chr2 35324578 35324599 -215363255 + AT_rich Low_complexity Low_complexity 1 21 0 233 0 0 59 chr2 35326959 35326993 -215360861 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1179 142 0 17 chr2 35327024 35327200 -215360654 - AluSx SINE Alu -139 173 1 358 290 174 14 chr2 35327229 35327367 -215360487 - MER5A DNA MER1_type -20 169 10 830 167 93 7 chr2 35327400 35327550 -215360304 + MER46A DNA MER2_type 1 163 -73 322 333 0 37 chr2 35327554 35327689 -215360165 + MER5B DNA MER1_type 33 162 -16 248 313 90 22 chr2 35327800 35327934 -215359920 + MIR SINE MIR 72 214 -48 210 294 81 81 chr2 35327978 35328114 -215359740 + L2 LINE L2 3161 3296 -17 2051 112 44 0 chr2 35328138 35328434 -215359420 - AluSq SINE Alu -4 309 1 233 351 126 9 chr2 35329218 35329329 -215358525 + L2 LINE L2 3189 3312 -1 237 33 0 0 chr2 35329483 35329513 -215358341 + (TG)n Simple_repeat Simple_repeat 2 31 0 456 293 98 18 chr2 35329962 35330126 -215357728 - MIR3 SINE MIR -2 206 30 1939 102 0 8 chr2 35330575 35330839 -215357015 + AluSq SINE Alu 39 300 -13 346 320 202 15 chr2 35330867 35331070 -215356784 - MIR SINE MIR -18 244 4 334 332 114 0 chr2 35331270 35331463 -215356391 + MIR SINE MIR 47 261 -1 2330 104 0 0 chr2 35331552 35331860 -215355994 - AluSx SINE Alu -4 308 1 208 352 36 73 chr2 35332221 35332440 -215355414 + L2 LINE L2 2539 2749 -565 694 24 0 0 chr2 35332449 35332533 -215355321 + L1MA2 LINE L1 6213 6296 -8 1922 126 13 13 chr2 35332607 35332916 -215354938 - AluSx SINE Alu 0 312 4 375 23 0 0 chr2 35333060 35333104 -215354750 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2335 57 0 0 chr2 35333105 35333453 -215354401 - AluY SINE Alu 0 348 1 711 264 26 79 chr2 35333580 35333845 -215354009 - MIR SINE MIR -5 257 7 288 339 153 8 chr2 35333918 35334042 -215353812 + L2 LINE L2 3127 3268 -4 387 306 45 65 chr2 35334919 35335118 -215352736 - L3 LINE CR1 -1 1576 1382 212 268 0 0 chr2 35335772 35335813 -215352041 - L2 LINE L2 -8 3264 3224 589 290 30 45 chr2 35336001 35336201 -215351653 - MIR SINE MIR -7 255 59 354 203 27 0 chr2 35338103 35338177 -215349677 + MIR SINE MIR 112 187 -75 2210 120 0 0 chr2 35338425 35338724 -215349130 - AluSx SINE Alu -13 299 1 351 241 0 36 chr2 35338958 35339070 -215348784 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 882 244 64 38 chr2 35339070 35339129 -215348725 - L1ME3 LINE L1 -26 6144 6088 237 65 0 0 chr2 35339129 35339160 -215348694 + (CA)n Simple_repeat Simple_repeat 1 31 0 882 244 64 38 chr2 35339160 35339437 -215348417 - L1ME3 LINE L1 -82 6088 5793 199 256 51 51 chr2 35339747 35339825 -215348029 + L2 LINE L2 3227 3304 -9 23 78 0 0 chr2 35340357 35340408 -215347446 + AT_rich Low_complexity Low_complexity 1 51 0 1424 234 84 42 chr2 35343944 35344506 -215343348 + LTR24B LTR ERV1 1 635 0 513 325 38 19 chr2 35345095 35345304 -215342550 - MIR SINE MIR -32 230 18 336 241 234 19 chr2 35348456 35348614 -215339240 - MIR SINE MIR -10 252 61 1592 299 143 21 chr2 35349557 35350462 -215337392 - HAL1 LINE L1 -1482 1025 11 750 262 159 56 chr2 35351016 35351532 -215336322 - MLT1G LTR MaLR -2 588 20 399 21 0 0 chr2 35351548 35351596 -215336258 + (CA)n Simple_repeat Simple_repeat 1 48 0 2155 104 0 3 chr2 35351664 35351962 -215335892 + AluSq SINE Alu 1 297 -16 186 333 105 9 chr2 35352384 35352489 -215335365 + MIR SINE MIR 77 191 -71 319 349 107 6 chr2 35353364 35353533 -215334321 + MIR SINE MIR 49 234 -28 641 92 10 0 chr2 35353574 35353672 -215334182 + (TCCC)n Simple_repeat Simple_repeat 1 99 0 189 171 0 0 chr2 35353675 35353710 -215334144 + CT-rich Low_complexity Low_complexity 3 37 0 441 218 87 91 chr2 35353735 35354010 -215333844 - L1MC5 LINE L1 -181 7780 7507 435 163 0 23 chr2 35354006 35354092 -215333762 - L1MD3 LINE L1 0 7995 7912 * 331 303 34 83 chr2 35354092 35354560 -215333294 + MER65A LTR ERV1 1 445 0 742 196 112 0 chr2 35354562 35354741 -215333113 - L1MD3 LINE L1 -82 7913 7715 565 220 70 59 chr2 35354861 35355134 -215332720 - L1MC5 LINE L1 -593 7368 7093 4490 170 32 22 chr2 35355284 35356162 -215331692 - L1MC2 LINE L1 -30 6314 5428 853 211 0 0 chr2 35356182 35356324 -215331530 - AluSg/x SINE Alu -37 273 132 1918 157 3 0 chr2 35356324 35356629 -215331225 - AluSx SINE Alu -6 306 1 1658 179 40 19 chr2 35356629 35357151 -215330703 - L1MC2 LINE L1 -743 5403 4914 1008 204 52 69 chr2 35357151 35357560 -215330294 + MLT1A1 LTR MaLR 1 363 -2 701 188 0 7 chr2 35357562 35357706 -215330148 - L1MC2 LINE L1 -1228 4918 4776 184 310 42 111 chr2 35357737 35357963 -215329891 + L3 LINE CR1 1050 1247 -330 2316 100 0 0 chr2 35357963 35358253 -215329601 + AluSx SINE Alu 1 290 -22 184 310 42 111 chr2 35358253 35358358 -215329496 + L3 LINE CR1 1247 1358 -219 2165 133 0 3 chr2 35358504 35358813 -215329041 + AluSx SINE Alu 3 310 -2 21 57 0 0 chr2 35360846 35360881 -215326973 + AT_rich Low_complexity Low_complexity 1 35 0 981 197 90 97 chr2 35362944 35363241 -215324613 + MER110A LTR ERV1 71 369 -99 2224 86 0 0 chr2 35363241 35363519 -215324335 + AluY SINE Alu 1 278 -33 369 0 0 0 chr2 35363519 35363560 -215324294 + (CAA)n Simple_repeat Simple_repeat 2 42 0 981 197 90 97 chr2 35363560 35363662 -215324192 + MER110A LTR ERV1 367 468 0 490 366 20 16 chr2 35364191 35364437 -215323417 + MIR SINE MIR 13 259 -3 208 339 117 44 chr2 35365159 35365339 -215322515 - MIR3 SINE MIR 0 208 16 434 281 55 70 chr2 35366024 35366280 -215321574 - L2 LINE L2 -655 2659 2408 605 324 39 26 chr2 35366448 35366757 -215321097 - L2 LINE L2 -1305 2009 1697 270 56 0 0 chr2 35367629 35367665 -215320189 + (CAA)n Simple_repeat Simple_repeat 1 36 0 619 328 43 21 chr2 35367848 35368174 -215319680 - L2 LINE L2 -1637 1677 1345 458 234 7 97 chr2 35368489 35368643 -215319211 - L2 LINE L2 -1 3312 3173 448 289 114 6 chr2 35368956 35369122 -215318732 - MIR SINE MIR -16 246 63 1994 113 6 3 chr2 35369414 35369725 -215318129 + AluSx SINE Alu 1 312 0 2277 102 0 6 chr2 35369809 35370123 -215317731 + AluSx SINE Alu 1 312 0 182 36 0 36 chr2 35370134 35370162 -215317692 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 642 284 115 82 chr2 35370461 35370628 -215317226 + L2 LINE L2 2590 2750 -563 2082 93 11 0 chr2 35370628 35370932 -215316922 + AluSp SINE Alu 1 307 0 642 284 115 82 chr2 35370932 35371440 -215316414 + L2 LINE L2 2750 3310 -3 21 0 0 0 chr2 35372382 35372403 -215315451 + AT_rich Low_complexity Low_complexity 1 21 0 588 317 65 40 chr2 35373030 35373459 -215314395 + L1MDa LINE L1 1036 1543 -4883 21 57 0 0 chr2 35373807 35373842 -215314012 + AT_rich Low_complexity Low_complexity 1 35 0 245 155 17 0 chr2 35374930 35374988 -215312866 + CT-rich Low_complexity Low_complexity 4 62 0 215 307 79 47 chr2 35375953 35376080 -215311774 + L2 LINE L2 2927 3057 -215 1109 255 82 51 chr2 35376325 35376851 -215311003 - L2 LINE L2 -1 3312 2756 2243 71 30 7 chr2 35376851 35377148 -215310706 - AluY SINE Alu -7 304 1 1109 255 82 51 chr2 35377148 35377203 -215310651 - L2 LINE L2 -557 2756 2704 232 364 36 7 chr2 35378503 35378643 -215309211 - MIR SINE MIR -116 146 3 180 298 48 0 chr2 35378974 35379058 -215308796 + L3 LINE CR1 634 721 -856 180 0 0 0 chr2 35379061 35379081 -215308773 + (TG)n Simple_repeat Simple_repeat 2 21 0 226 309 231 34 chr2 35379744 35380038 -215307816 + L3 LINE CR1 1094 1445 -132 26 50 0 0 chr2 35380980 35381020 -215306834 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr2 35382460 35382494 -215305360 + AT_rich Low_complexity Low_complexity 1 34 0 637 50 0 0 chr2 35384056 35384136 -215303718 + MADE1 DNA Mariner 1 80 0 22 70 0 0 chr2 35384594 35384637 -215303217 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 35384722 35384745 -215303109 + AT_rich Low_complexity Low_complexity 1 23 0 386 68 108 40 chr2 35385086 35385160 -215302694 + MADE1 DNA Mariner 2 80 0 662 273 63 10 chr2 35385698 35385815 -215302039 - MER58A DNA MER1_type -2196 224 90 2435 76 0 0 chr2 35385815 35386118 -215301736 + AluY SINE Alu 1 303 -8 662 273 63 10 chr2 35386118 35386205 -215301649 - MER58A DNA MER1_type -2330 90 9 2056 117 0 0 chr2 35386888 35387170 -215300684 + AluSc SINE Alu 1 282 -27 180 0 0 0 chr2 35387173 35387193 -215300661 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 366 221 13 0 chr2 35387570 35387647 -215300207 + AluSg/x SINE Alu 197 274 -26 25 51 0 0 chr2 35387647 35387686 -215300168 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 35388341 35388371 -215299483 + AT_rich Low_complexity Low_complexity 1 30 0 184 288 61 0 chr2 35389054 35389120 -215298734 - L2 LINE L2 -649 2665 2596 743 172 0 8 chr2 35390865 35390999 -215296855 + FLAM_C SINE Alu 1 133 0 21 36 0 0 chr2 35391522 35391550 -215296304 + AT_rich Low_complexity Low_complexity 1 28 0 200 217 87 0 chr2 35391553 35391599 -215296255 - L2 LINE L2 -8 3305 3256 2442 30 40 3 chr2 35392777 35393076 -215294778 - AluY SINE Alu 0 311 2 270 0 0 0 chr2 35393210 35393240 -215294614 + (TG)n Simple_repeat Simple_repeat 2 31 0 1298 177 0 0 chr2 35393516 35393725 -215294129 + AluJo SINE Alu 87 295 -17 222 203 51 0 chr2 35393780 35393839 -215294015 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 21 57 0 0 chr2 35394412 35394447 -215293407 + AT_rich Low_complexity Low_complexity 1 35 0 558 191 8 23 chr2 35395739 35395870 -215291984 + L1PA15 LINE L1 6035 6163 -2 26 0 0 0 chr2 35396089 35396115 -215291739 + AT_rich Low_complexity Low_complexity 1 26 0 302 98 20 0 chr2 35396350 35396401 -215291453 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 24 53 0 0 chr2 35397629 35397667 -215290187 + AT_rich Low_complexity Low_complexity 1 38 0 1985 248 96 2 chr2 35398041 35398719 -215289135 + Charlie1 DNA MER1_type 5 2051 -710 293 214 0 22 chr2 35398729 35398818 -215289036 + GA-rich Low_complexity Low_complexity 4 90 0 317 254 15 0 chr2 35398821 35398888 -215288966 + MER21B LTR ERV1 26 93 -770 1828 226 139 62 chr2 35398907 35398959 -215288895 + MER21B LTR ERV1 19 66 -797 2679 14 0 0 chr2 35398959 35399253 -215288601 - AluY SINE Alu -17 294 1 1828 226 139 62 chr2 35399253 35399936 -215287918 + MER21B LTR ERV1 66 810 -53 1567 234 29 83 chr2 35400003 35400469 -215287385 + MER77 LTR ERV1 1 390 -172 2878 191 49 12 chr2 35400483 35401154 -215286700 + Charlie1 DNA MER1_type 2066 2761 0 234 0 0 0 chr2 35401814 35401840 -215286014 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 652 175 31 81 chr2 35402185 35402345 -215285509 - MER4D LTR ERV1 -717 155 4 1113 160 17 25 chr2 35402378 35402577 -215285277 - MER66-int LTR ERV1 -1062 7058 4350 301 179 224 0 chr2 35402551 35402618 -215285236 - MER66-int LTR ERV1 -4088 4032 3951 * 730 158 17 107 chr2 35402798 35402975 -215284879 - MER66-int LTR ERV1 -4174 3946 3786 353 260 63 8 chr2 35403112 35403239 -215284615 - MER66-int LTR ERV1 -2151 4180 4047 2059 181 63 94 chr2 35403240 35404637 -215283217 - MER66-int LTR ERV1 -2512 4164 1210 2425 177 15 9 chr2 35404640 35405103 -215282751 - MER66-int LTR ERV1 -220 1566 1101 671 260 11 88 chr2 35405288 35405573 -215282281 - MER66-int LTR ERV1 -3521 3155 2893 637 189 6 111 chr2 35405788 35405968 -215281886 - MER66-int LTR ERV1 -5760 916 756 1821 209 17 52 chr2 35406505 35406964 -215280890 - MER41B LTR ERV1 -36 599 157 253 136 23 34 chr2 35407278 35407366 -215280488 + (TA)n Simple_repeat Simple_repeat 2 88 0 24 32 0 0 chr2 35408138 35408169 -215279685 + AT_rich Low_complexity Low_complexity 1 31 0 1888 155 0 16 chr2 35408402 35408719 -215279135 - AluSx SINE Alu 0 312 1 839 188 0 0 chr2 35409511 35409649 -215278205 + FLAM_C SINE Alu 1 138 -5 418 237 0 59 chr2 35410020 35410138 -215277716 + L2 LINE L2 3203 3313 0 200 322 11 35 chr2 35410464 35410551 -215277303 - L2 LINE L2 -188 3084 3000 267 67 67 22 chr2 35411407 35411452 -215276402 - L1PA8A LINE L1 -494 5637 5591 468 262 61 65 chr2 35412046 35412325 -215275529 - LTR16B LTR ERVL 0 464 187 210 154 0 0 chr2 35412375 35412414 -215275440 + T-rich Low_complexity Low_complexity 2 40 0 1589 149 4 20 chr2 35412414 35412518 -215275336 - AluSq SINE Alu -62 251 147 5488 67 105 4 chr2 35412518 35413268 -215274586 + LTR12 LTR ERV1 1 826 0 1589 149 4 20 chr2 35413268 35413412 -215274442 - AluSq SINE Alu -166 147 7 268 290 28 80 chr2 35413426 35413602 -215274252 - HERV16 LTR ERVL -1273 3723 3557 639 278 53 60 chr2 35413715 35413996 -215273858 - HERV16 LTR ERVL -2964 2032 1754 297 167 0 0 chr2 35414055 35414109 -215273745 + CT-rich Low_complexity Low_complexity 1 54 0 378 91 0 0 chr2 35414253 35414308 -215273546 - MLT2A2 LTR ERVL 0 453 399 27 49 0 0 chr2 35414315 35414356 -215273498 + AT_rich Low_complexity Low_complexity 1 41 0 3113 84 5 8 chr2 35414362 35414783 -215273071 - MLT2A1 LTR ERVL -34 486 1 1963 335 56 47 chr2 35414786 35416204 -215271650 - HERV16 LTR ERVL -3563 1433 3 818 264 94 37 chr2 35416206 35416641 -215271213 - LTR16B LTR ERVL 0 464 5 2265 79 0 4 chr2 35416715 35417028 -215270826 + AluY SINE Alu 5 316 0 294 189 0 40 chr2 35417271 35417345 -215270509 + MER103 DNA DNA 36 106 -60 189 0 0 0 chr2 35418794 35418815 -215269039 + (T)n Simple_repeat Simple_repeat 1 21 0 905 231 24 48 chr2 35419284 35419535 -215268319 - L1MC4 LINE L1 -1126 6916 6672 227 188 0 31 chr2 35419569 35419633 -215268221 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 1952 140 0 7 chr2 35420367 35420697 -215267157 - AluSx SINE Alu 0 328 1 272 279 26 32 chr2 35421403 35421593 -215266261 - L2 LINE L2 -2656 658 470 2115 113 3 0 chr2 35422411 35422695 -215265159 + AluSq SINE Alu 1 285 -28 24 32 0 0 chr2 35422695 35422726 -215265128 + AT_rich Low_complexity Low_complexity 1 31 0 647 134 75 118 chr2 35423523 35423572 -215264282 - MER53 DNA DNA -9 180 130 477 68 11 114 chr2 35423572 35423624 -215264230 - MADE1 DNA Mariner 0 80 39 1916 83 19 23 chr2 35423624 35423888 -215263966 + AluSc SINE Alu 37 299 -10 477 68 11 114 chr2 35423888 35423923 -215263931 - MADE1 DNA Mariner -41 39 2 647 134 75 118 chr2 35423923 35424059 -215263795 - MER53 DNA DNA -59 130 3 23 0 0 0 chr2 35424337 35424360 -215263494 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 35424456 35424484 -215263370 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 35424597 35424623 -215263231 + AT_rich Low_complexity Low_complexity 1 26 0 423 386 13 4 chr2 35424868 35425104 -215262750 + L1MC/D LINE L1 5497 5734 -2074 31 44 0 0 chr2 35425218 35425263 -215262591 + AT_rich Low_complexity Low_complexity 1 45 0 613 281 101 10 chr2 35426315 35426514 -215261340 - MIR SINE MIR 0 262 46 251 218 109 0 chr2 35427412 35427467 -215260387 - L2 LINE L2 -3 3310 3250 2133 190 77 17 chr2 35427503 35427971 -215259883 + MER67D LTR ERV1 11 506 -8 184 244 0 0 chr2 35428979 35429020 -215258834 - MIR SINE MIR -176 86 46 825 187 107 8 chr2 35429229 35429491 -215258363 - L1MA2 LINE L1 -49 6255 5968 2414 68 7 7 chr2 35429896 35430203 -215257651 + AluY SINE Alu 5 311 0 207 0 0 0 chr2 35433267 35433290 -215254564 + (TTG)n Simple_repeat Simple_repeat 2 24 0 207 0 0 0 chr2 35433289 35433312 -215254542 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 952 90 0 0 chr2 35433312 35433434 -215254420 - AluSc SINE Alu -32 277 156 27 62 0 0 chr2 35433543 35433591 -215254263 + AT_rich Low_complexity Low_complexity 1 48 0 43328 45 2 4 chr2 35433591 35439752 -215248102 - L1PA4 LINE L1 -3 6152 1 495 228 45 119 chr2 35440358 35440626 -215247228 - MER112 DNA MER1_type -12 248 1 415 191 0 19 chr2 35440961 35441066 -215246788 + (CA)n Simple_repeat Simple_repeat 2 104 0 329 268 62 21 chr2 35443393 35443490 -215244364 + MIR SINE MIR 6 106 -156 7455 187 44 17 chr2 35444317 35446980 -215240874 - L1MA8 LINE L1 -22 7688 4940 269 161 18 0 chr2 35446993 35447049 -215240805 - L1MA8 LINE L1 -4930 2635 2579 247 208 21 0 chr2 35447095 35447143 -215240711 - L1MA8 LINE L1 -6981 508 460 2138 124 0 0 chr2 35447265 35447556 -215240298 + AluY SINE Alu 1 291 -20 500 248 29 15 chr2 35447638 35447775 -215240079 - MLT1G1 LTR MaLR -7 588 450 386 321 14 29 chr2 35447779 35447919 -215239935 - MLT1G1 LTR MaLR -276 319 182 273 319 80 0 chr2 35448045 35448158 -215239696 - MLT1G1 LTR MaLR -473 122 1 23 0 0 0 chr2 35449012 35449035 -215238819 + AT_rich Low_complexity Low_complexity 1 23 0 1427 215 18 0 chr2 35449127 35449457 -215238397 - L1MB7 LINE L1 -13 6171 5836 307 299 103 0 chr2 35449833 35449920 -215237934 - L1M4 LINE L1 -1922 4224 4129 454 330 87 54 chr2 35450040 35450373 -215237481 - L1M4 LINE L1 -2005 4141 3798 2120 124 3 0 chr2 35450647 35450938 -215236916 - AluSx SINE Alu -20 292 1 449 255 57 13 chr2 35450980 35451137 -215236717 - MIR SINE MIR -1 261 98 229 374 45 32 chr2 35451300 35451455 -215236399 + MIR3 SINE MIR 48 204 -4 459 337 49 0 chr2 35451648 35451811 -215236043 + MER117 DNA MER1_type 25 195 -2 1404 193 57 33 chr2 35453098 35453443 -215234411 - MLT1A1 LTR MaLR -13 352 1 1653 263 49 30 chr2 35453684 35454193 -215233661 - LTR40a LTR ERVL 0 519 1 189 352 0 0 chr2 35454309 35454363 -215233491 + MIR SINE MIR 207 260 -2 402 319 176 9 chr2 35455001 35455217 -215232637 + MIR SINE MIR 11 262 0 207 0 0 0 chr2 35458361 35458384 -215229470 + (TA)n Simple_repeat Simple_repeat 2 24 0 342 292 29 22 chr2 35458854 35458991 -215228863 - L1MC4 LINE L1 -549 7493 7356 451 108 96 0 chr2 35459138 35459221 -215228633 - L1PA12 LINE L1 0 6168 6078 310 350 11 11 chr2 35459279 35459456 -215228398 - HAL1b LINE L1 -916 432 256 2384 73 0 0 chr2 35459534 35459839 -215228015 - AluY SINE Alu 0 305 1 3656 101 12 2 chr2 35459990 35460503 -215227351 - L1PA13 LINE L1 -23 6140 5623 566 241 204 34 chr2 35461685 35462038 -215225816 - L1ME4a LINE L1 -52 6069 5657 844 321 68 55 chr2 35462324 35462929 -215224925 + L2 LINE L2 2171 2783 -531 1000 236 11 18 chr2 35462929 35463205 -215224649 - L1M4 LINE L1 -2455 3691 3418 558 254 107 36 chr2 35463205 35463457 -215224397 + MER76 LTR ERV 282 551 -137 6035 143 35 35 chr2 35463620 35464396 -215223458 + L1M1 LINE L1 1709 2483 -5082 2367 80 6 6 chr2 35464396 35464707 -215223147 + AluY SINE Alu 1 311 0 6035 143 35 35 chr2 35464707 35465535 -215222319 + L1M1 LINE L1 2483 3309 -4256 * 6745 189 10 18 chr2 35465530 35465602 -215222252 + L1M1 LINE L1 4373 4444 -3121 2027 129 93 12 chr2 35465602 35465934 -215221920 + THE1B LTR MaLR 5 363 -1 6745 189 10 18 chr2 35465934 35467335 -215220519 + L1M1 LINE L1 4444 5835 -1730 2810 111 9 11 chr2 35467336 35467769 -215220085 + L1MA2 LINE L1 5847 6278 -26 607 221 14 29 chr2 35468139 35468279 -215219575 + AluJo SINE Alu 2 139 -173 836 209 63 19 chr2 35468502 35468666 -215219188 - MER34 LTR ERV1 -3 539 363 2298 99 7 0 chr2 35468666 35468970 -215218884 - AluSc SINE Alu -3 306 1 836 209 63 19 chr2 35468970 35469011 -215218843 - MER34 LTR ERV1 -179 363 325 212 314 119 62 chr2 35469104 35469330 -215218524 + L2 LINE L2 977 1215 -2099 418 281 0 23 chr2 35469416 35469544 -215218310 + MER117 DNA MER1_type 33 157 -40 242 345 94 60 chr2 35470003 35470396 -215217458 + L2 LINE L2 1861 2272 -1042 2311 178 54 13 chr2 35470396 35470862 -215216992 - MER66B LTR ERV1 0 486 2 242 345 94 60 chr2 35470862 35470905 -215216949 + L2 LINE L2 2272 2312 -1002 406 244 0 0 chr2 35471031 35471121 -215216733 - MER66B LTR ERV1 -395 91 2 1057 126 88 0 chr2 35471787 35471946 -215215908 - AluSx SINE Alu -139 173 1 2191 106 3 0 chr2 35472032 35472325 -215215529 - AluSx SINE Alu -18 294 1 423 306 111 78 chr2 35473043 35473504 -215214350 + L2 LINE L2 2838 3313 0 2243 66 35 3 chr2 35473693 35473982 -215213872 - AluY SINE Alu -13 298 1 1953 142 7 0 chr2 35475949 35476230 -215211624 + AluSx SINE Alu 5 287 -25 603 273 52 30 chr2 35476291 35476558 -215211296 + L1ME LINE L1 5522 5794 -327 363 231 43 9 chr2 35477087 35477199 -215210655 + MLT1I LTR MaLR 311 409 0 295 314 51 58 chr2 35477208 35477364 -215210490 + MIR SINE MIR 72 226 -36 23 0 0 0 chr2 35477511 35477534 -215210320 + AT_rich Low_complexity Low_complexity 1 23 0 4354 16 0 0 chr2 35479839 35480337 -215207517 - L1PA2 LINE L1 -1 6154 5657 3328 13 10 3 chr2 35480337 35480728 -215207126 + L1PA2 LINE L1 5275 5668 -487 347 257 76 0 chr2 35481421 35481526 -215206328 - MIR3 SINE MIR -11 197 85 2050 138 0 10 chr2 35481657 35481955 -215205899 - AluSx SINE Alu -17 295 1 205 382 0 0 chr2 35482052 35482120 -215205734 + L2 LINE L2 3202 3269 -3 4090 225 64 48 chr2 35483297 35483818 -215204036 + L1MB7 LINE L1 3833 4344 -1840 1719 188 14 0 chr2 35483818 35484106 -215203748 + AluJo SINE Alu 1 292 -20 4090 225 64 48 chr2 35484106 35484904 -215202950 + L1MB7 LINE L1 4344 5128 -1056 1556 186 6 40 chr2 35484904 35485227 -215202627 + AluJo SINE Alu 1 312 0 4090 225 64 48 chr2 35485227 35486218 -215201636 + L1MB7 LINE L1 5128 6169 -15 223 269 138 35 chr2 35486242 35486387 -215201467 + MIR SINE MIR 57 216 -46 451 281 127 70 chr2 35486469 35487031 -215200823 - L2 LINE L2 -8 3305 2710 265 358 193 21 chr2 35487031 35487411 -215200443 - L2 LINE L2 -1176 2138 1825 2296 89 0 13 chr2 35487411 35487714 -215200140 - AluY SINE Alu -12 299 1 265 358 193 21 chr2 35487714 35488424 -215199430 - L2 LINE L2 -1489 1825 860 2291 76 7 26 chr2 35488492 35488795 -215199059 - AluSx SINE Alu -11 301 5 387 298 107 29 chr2 35489172 35489414 -215198440 - MIR SINE MIR -1 261 1 275 170 0 0 chr2 35490737 35490784 -215197070 + L1ME1 LINE L1 3943 3989 -2157 5732 142 10 14 chr2 35490810 35491367 -215196487 - L1PB3 LINE L1 -16 6138 5580 2121 127 7 0 chr2 35491367 35491674 -215196180 + AluSg SINE Alu 1 309 -1 5732 142 10 14 chr2 35491674 35492350 -215195504 - L1PB3 LINE L1 -574 5580 4910 3444 252 41 48 chr2 35492369 35493985 -215193869 + L1ME1 LINE L1 3975 5565 -601 6347 107 23 51 chr2 35494029 35495265 -215192589 - L1MA3 LINE L1 0 6305 5101 1516 211 112 24 chr2 35495284 35495740 -215192114 + L1ME1 LINE L1 5588 6083 -81 28 61 0 0 chr2 35495765 35495814 -215192040 + AT_rich Low_complexity Low_complexity 1 49 0 278 360 35 9 chr2 35496728 35496842 -215191012 - L3 LINE CR1 -82 1495 1379 289 346 109 0 chr2 35496852 35497054 -215190800 - L3 LINE CR1 -724 853 630 516 233 195 19 chr2 35497583 35497742 -215190112 + MIR SINE MIR 26 212 -50 1061 248 87 13 chr2 35497784 35498175 -215189679 - MER110A LTR ERV1 0 468 49 8034 4 1 0 chr2 35498541 35499506 -215188348 - L1HS LINE L1 0 6155 5190 * 25206 23 0 0 chr2 35499503 35502494 -215185360 + L1HS LINE L1 2188 5178 -968 23 0 0 0 chr2 35502495 35502518 -215185336 + AT_rich Low_complexity Low_complexity 1 23 0 428 248 25 8 chr2 35502951 35503072 -215184782 - MER94 DNA DNA -11 123 1 216 329 141 12 chr2 35503098 35503183 -215184671 + MIR SINE MIR 16 111 -97 2465 69 3 0 chr2 35503561 35503864 -215183990 - AluY SINE Alu -6 305 2 5420 161 14 2 chr2 35503957 35504846 -215183008 + MER54A LTR ERVL 3 901 0 510 200 222 0 chr2 35505108 35505243 -215182611 - MLT1D LTR MaLR -60 445 281 1300 268 55 30 chr2 35506152 35506600 -215181254 + LTR16A LTR ERVL 1 445 -5 222 62 0 0 chr2 35506721 35506753 -215181101 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 279 294 54 11 chr2 35508001 35508093 -215179761 + MER5A DNA MER1_type 20 115 -74 791 182 35 104 chr2 35508093 35508324 -215179530 - MER20 DNA MER1_type 0 219 5 580 282 88 35 chr2 35508485 35508769 -215179085 - L2 LINE L2 -16 3297 2999 412 210 0 0 chr2 35509155 35509236 -215178618 + MER96 DNA MER1_type? 5 85 -90 725 86 0 35 chr2 35509696 35509812 -215178042 - L1P LINE L1 -1262 4884 4773 * 4188 34 21 0 chr2 35509809 35510340 -215177514 + L1P LINE L1 4843 5384 -762 337 252 65 65 chr2 35512777 35512932 -215174922 + MIR SINE MIR 60 214 -48 281 366 18 0 chr2 35512977 35513089 -215174765 + L2 LINE L2 3151 3264 -8 18969 58 3 1 chr2 35513592 35516977 -215170877 + L1PA4 LINE L1 2 3395 -2751 7374 36 0 2 chr2 35516977 35518644 -215169210 + L1PA3 LINE L1 4491 6155 0 * 15946 44 0 7 chr2 35518640 35521403 -215166451 + L1PA4 LINE L1 3387 6151 -4 1693 205 58 3 chr2 35521737 35522083 -215165771 + MLT1A1 LTR MaLR 1 365 0 2346 105 0 0 chr2 35522608 35522912 -215164942 - AluSx SINE Alu -8 304 1 25 0 0 0 chr2 35524035 35524060 -215163794 + AT_rich Low_complexity Low_complexity 1 25 0 284 51 68 0 chr2 35524130 35524189 -215163665 + (TA)n Simple_repeat Simple_repeat 1 63 0 516 36 95 30 chr2 35524226 35524394 -215163460 + (TA)n Simple_repeat Simple_repeat 1 179 0 181 0 69 0 chr2 35524408 35524437 -215163417 + (TA)n Simple_repeat Simple_repeat 2 32 0 3358 281 157 28 chr2 35524564 35526118 -215161736 + L2 LINE L2 1139 2893 -421 382 219 31 0 chr2 35526170 35526266 -215161588 - MLT1G LTR MaLR 0 590 492 2301 105 3 0 chr2 35526285 35526590 -215161264 - AluY SINE Alu -1 310 5 546 283 90 13 chr2 35526626 35526859 -215160995 - MLT1G LTR MaLR -267 323 73 490 244 48 163 chr2 35526911 35527304 -215160550 + L2 LINE L2 2965 3312 -1 1855 171 0 0 chr2 35527411 35527691 -215160163 + AluSx SINE Alu 1 280 -32 1069 103 11 6 chr2 35527691 35527866 -215159988 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 883 289 59 20 chr2 35528014 35528370 -215159484 - MLT1A2 LTR MaLR -4 370 1 21 0 0 0 chr2 35528432 35528453 -215159401 + AT_rich Low_complexity Low_complexity 1 21 0 3811 146 102 28 chr2 35529228 35530618 -215157236 - pTR5 LTR ERV1 0 2606 1524 1394 330 160 23 chr2 35531936 35532370 -215155484 + L2 LINE L2 1444 1817 -1496 1930 150 17 0 chr2 35532370 35532663 -215155191 - AluSx SINE Alu -14 298 1 1394 330 160 23 chr2 35532663 35533853 -215154001 + L2 LINE L2 1817 3313 0 1885 147 13 10 chr2 35534193 35534499 -215153355 - AluSx SINE Alu -5 307 1 2385 91 0 0 chr2 35534577 35534874 -215152980 - AluSq SINE Alu -16 297 1 23 33 0 0 chr2 35534950 35534980 -215152874 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 35535556 35535577 -215152277 + AT_rich Low_complexity Low_complexity 1 21 0 632 258 41 21 chr2 35535843 35536037 -215151817 - MIR SINE MIR -7 255 58 22 0 0 0 chr2 35536276 35536298 -215151556 + AT_rich Low_complexity Low_complexity 1 22 0 3261 174 30 10 chr2 35536380 35537079 -215150775 + L1MA4A LINE L1 4081 4793 -1353 3119 141 12 18 chr2 35537068 35537777 -215150077 + L1MA4A LINE L1 5127 5832 -471 * 1666 25 0 5 chr2 35538444 35538664 -215149190 + L1PA3 LINE L1 5952 6170 0 37 62 0 0 chr2 35538671 35538736 -215149118 + AT_rich Low_complexity Low_complexity 1 65 0 331 289 67 30 chr2 35539197 35539332 -215148522 - MIR3 SINE MIR -7 201 62 351 0 0 0 chr2 35539961 35540000 -215147854 + (CA)n Simple_repeat Simple_repeat 2 40 0 846 142 27 0 chr2 35540053 35540201 -215147653 - AluJb SINE Alu -1 311 160 571 61 74 12 chr2 35540741 35540904 -215146950 + (TA)n Simple_repeat Simple_repeat 1 173 0 387 0 0 0 chr2 35540919 35540962 -215146892 + (CA)n Simple_repeat Simple_repeat 2 44 0 234 220 0 17 chr2 35540962 35541021 -215146833 + (TA)n Simple_repeat Simple_repeat 1 58 0 225 0 0 0 chr2 35541084 35541109 -215146745 + (GA)n Simple_repeat Simple_repeat 2 26 0 390 218 58 65 chr2 35542601 35542909 -215144945 + L1M4 LINE L1 3029 3334 -2812 8159 201 27 50 chr2 35542920 35544764 -215143090 + L1M2 LINE L1 1 1800 -5049 2290 126 8 21 chr2 35544764 35545144 -215142710 - THE1C LTR MaLR 0 375 1 8159 201 27 50 chr2 35545144 35545246 -215142608 + L1M2 LINE L1 1800 1903 -4946 8523 185 31 25 chr2 35545269 35548330 -215139524 + L1PA8 LINE L1 10 3149 -3312 8339 108 58 9 chr2 35548330 35550357 -215137497 + L1PA8 LINE L1 4418 6485 -2 7456 190 40 11 chr2 35550358 35553290 -215134564 + L1M2 LINE L1 1907 4926 -1922 215 200 0 0 chr2 35553290 35553325 -215134529 + (CA)n Simple_repeat Simple_repeat 2 36 0 435 332 60 30 chr2 35553672 35553904 -215133950 - MIR SINE MIR -12 250 12 215 352 46 9 chr2 35553981 35554089 -215133765 - MIR SINE MIR -25 237 126 2332 90 7 0 chr2 35554117 35554416 -215133438 + AluSc SINE Alu 1 301 -8 184 378 14 0 chr2 35554629 35554703 -215133151 - L2 LINE L2 -2905 409 335 2067 132 7 0 chr2 35555532 35555827 -215132027 - AluSg SINE Alu -13 297 1 3508 86 68 0 chr2 35556162 35556674 -215131180 + L1PA13 LINE L1 5617 6163 0 223 305 57 19 chr2 35556721 35556826 -215131028 - MIR SINE MIR -46 216 108 318 304 48 60 chr2 35557644 35557812 -215130042 - MIR SINE MIR -50 212 47 15318 81 4 15 chr2 35557816 35560116 -215127738 + L1PA5 LINE L1 918 3191 -2955 5160 54 0 0 chr2 35560116 35560744 -215127110 + L1PA5 LINE L1 5526 6154 0 * 17118 56 5 1 chr2 35560741 35563712 -215124142 + L1PA5 LINE L1 3179 6145 -9 5914 165 8 13 chr2 35565735 35567829 -215120025 + L1PA15 LINE L1 4078 6156 -9 297 302 104 39 chr2 35569076 35569258 -215118596 - MIR SINE MIR -10 252 59 252 328 145 15 chr2 35569594 35569725 -215118129 + MIR SINE MIR 5 152 -110 2321 71 3 10 chr2 35569729 35570054 -215117800 + AluY SINE Alu 2 311 0 2068 169 8 16 chr2 35571421 35571789 -215116065 - MLT1A1 LTR MaLR 0 365 1 523 290 115 40 chr2 35572117 35572978 -215114876 + L1ME3A LINE L1 1450 2375 -4021 240 214 145 63 chr2 35573146 35573305 -215114549 + L1ME3A LINE L1 5386 5557 -682 433 307 68 19 chr2 35573501 35573810 -215114044 + L1ME3A LINE L1 5747 6070 -169 1044 55 0 0 chr2 35573810 35573938 -215113916 - L1PA6 LINE L1 -433 5721 5594 3419 58 0 0 chr2 35573938 35574366 -215113488 + L1PA6 LINE L1 5725 6152 -2 307 306 16 49 chr2 35574366 35574549 -215113305 + L1ME3A LINE L1 6059 6235 -4 228 297 45 72 chr2 35574856 35574967 -215112887 - L2 LINE L2 -2 3270 3163 357 326 80 29 chr2 35575796 35576035 -215111819 + MIR SINE MIR 3 253 -9 523 288 59 12 chr2 35577036 35577206 -215110648 + LTR33 LTR ERVL 4 181 -340 331 369 20 10 chr2 35577267 35577462 -215110392 + LTR33 LTR ERVL 304 500 -21 889 296 109 3 chr2 35577884 35578168 -215109686 + LTR16A LTR ERVL 135 448 -2 1875 229 127 22 chr2 35578278 35578815 -215109039 - MLT1E LTR MaLR 0 593 1 363 363 47 10 chr2 35579971 35580164 -215107690 - MIR SINE MIR -55 207 8 1971 102 4 4 chr2 35581082 35581346 -215106508 - AluSx SINE Alu -21 291 28 370 115 103 0 chr2 35581453 35581540 -215106314 - AluSq/x SINE Alu -197 106 11 22 0 0 0 chr2 35581670 35581692 -215106162 + AT_rich Low_complexity Low_complexity 1 22 0 184 315 0 90 chr2 35581871 35581960 -215105894 - L2 LINE L2 -3228 86 6 21 36 0 0 chr2 35582872 35582900 -215104954 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr2 35584178 35584204 -215103650 + (TA)n Simple_repeat Simple_repeat 2 27 0 1746 88 0 0 chr2 35584204 35584419 -215103435 - AluSg/x SINE Alu -12 298 84 2166 117 3 3 chr2 35585601 35585901 -215101953 + AluSg SINE Alu 1 300 -10 22 35 0 0 chr2 35585988 35586017 -215101837 + AT_rich Low_complexity Low_complexity 1 29 0 344 220 89 77 chr2 35586445 35586594 -215101260 - MIR3 SINE MIR -52 156 37 188 194 65 65 chr2 35586852 35586914 -215100940 + MIR3 SINE MIR 140 201 -7 11079 174 16 35 chr2 35588892 35589390 -215098464 - L1MA2 LINE L1 -194 7529 7023 2173 119 53 19 chr2 35589390 35589751 -215098103 + THE1C LTR MaLR 3 375 0 11079 174 16 35 chr2 35589751 35592139 -215095715 - L1MA2 LINE L1 -700 7023 4628 553 141 0 0 chr2 35592139 35592231 -215095623 - AluSp/q SINE Alu 0 313 222 11079 174 16 35 chr2 35592231 35592642 -215095212 - L1MA2 LINE L1 -3095 4628 4210 1911 122 56 88 chr2 35592642 35593018 -215094836 - THE1B LTR MaLR 0 364 1 442 116 0 0 chr2 35593018 35593087 -215094767 - THE1B-int LTR MaLR 0 1580 1512 * 1957 105 21 0 chr2 35593082 35593367 -215094487 - THE1B-int LTR MaLR -1289 291 1 1920 161 27 35 chr2 35593367 35593622 -215094232 - THE1B LTR MaLR 0 364 111 2235 127 0 0 chr2 35593622 35593930 -215093924 - AluSx SINE Alu -4 308 1 1920 161 27 35 chr2 35593930 35594041 -215093813 - THE1B LTR MaLR -253 111 1 15372 161 134 45 chr2 35594041 35594657 -215093197 - L1MA2 LINE L1 -3351 4214 3654 2068 126 7 0 chr2 35594657 35594959 -215092895 - AluSc SINE Alu -5 304 1 15372 161 134 45 chr2 35594959 35596023 -215091831 - L1MA2 LINE L1 -3911 3654 2686 276 89 0 0 chr2 35596023 35596068 -215091786 - AluSx SINE Alu -2 299 255 15372 161 134 45 chr2 35596068 35597264 -215090590 - L1MA2 LINE L1 -4879 2686 1598 2587 123 0 3 chr2 35597264 35597629 -215090225 - THE1B LTR MaLR 0 364 1 15372 161 134 45 chr2 35597629 35597725 -215090129 - L1MA2 LINE L1 -5967 1598 1512 1611 172 55 33 chr2 35597725 35598092 -215089762 + THE1C LTR MaLR 1 375 0 9233 141 11 47 chr2 35598096 35599730 -215088124 + THE1C-int LTR MaLR 5 1580 0 1592 154 199 8 chr2 35599731 35599916 -215087938 + MSTA LTR MaLR 2 150 -278 204 40 0 0 chr2 35599916 35599941 -215087913 + (TC)n Simple_repeat Simple_repeat 2 26 0 1592 154 199 8 chr2 35599941 35600112 -215087742 + MSTA LTR MaLR 150 426 -2 15372 161 134 45 chr2 35600112 35600934 -215086920 - L1MA2 LINE L1 -6054 1511 16 219 364 34 11 chr2 35602446 35602534 -215085320 - L2 LINE L2 -21 3292 3203 405 39 0 0 chr2 35602622 35602673 -215085181 + (TG)n Simple_repeat Simple_repeat 2 52 0 28 0 0 0 chr2 35602702 35602730 -215085124 + AT_rich Low_complexity Low_complexity 1 28 0 1743 229 154 12 chr2 35603062 35603555 -215084299 + MLT1F1 LTR MaLR 3 565 -2 574 301 24 45 chr2 35603929 35604175 -215083679 - L3 LINE CR1 -109 1468 1228 220 339 179 9 chr2 35604340 35604452 -215083402 - MIR SINE MIR -75 187 57 21 57 0 0 chr2 35604829 35604864 -215082990 + AT_rich Low_complexity Low_complexity 1 35 0 223 261 57 89 chr2 35605384 35605496 -215082358 + MIR SINE MIR 36 143 -119 2224 125 31 3 chr2 35605496 35605847 -215082007 + MER46B DNA MER2_type 1 236 0 223 261 57 89 chr2 35605847 35605891 -215081963 + MIR SINE MIR 143 187 -75 22 0 0 0 chr2 35606061 35606083 -215081771 + AT_rich Low_complexity Low_complexity 1 22 0 31269 115 12 59 chr2 35606128 35612131 -215075723 + L1P3 LINE L1 12 5725 -429 1655 143 4 8 chr2 35712131 35712383 -214975471 - AluSx SINE Alu -61 251 1 2052 122 27 0 chr2 35713185 35713479 -214974375 + AluSx SINE Alu 1 302 -10 2665 77 6 3 chr2 35714069 35714421 -214973433 - THE1A LTR MaLR 0 355 3 233 245 0 0 chr2 35714447 35714500 -214973354 + T-rich Low_complexity Low_complexity 1 53 0 1638 233 103 24 chr2 35715065 35715533 -214972321 + MLT1D LTR MaLR 1 505 0 3750 159 35 5 chr2 35715598 35716347 -214971507 + L1MA4 LINE L1 5529 6299 -1 540 144 58 29 chr2 35717454 35717593 -214970261 + Tigger6 DNA MER2_type 1308 1450 -147 3523 203 47 26 chr2 35718612 35719420 -214968434 + Tigger6a DNA MER2_type 1 825 -258 495 209 72 46 chr2 35719424 35719534 -214968320 - L1MD2 LINE L1 -114 6245 6128 192 40 0 0 chr2 35719534 35719559 -214968295 + (TG)n Simple_repeat Simple_repeat 2 26 0 495 209 72 46 chr2 35719559 35719601 -214968253 - L1MD2 LINE L1 -231 6128 6089 1081 191 4 33 chr2 35719911 35720183 -214967671 + Tigger6a DNA MER2_type 819 1082 -1 2406 68 14 0 chr2 35721346 35721641 -214966213 - AluY SINE Alu -9 302 4 209 250 0 18 chr2 35721838 35721894 -214965960 + (TA)n Simple_repeat Simple_repeat 2 56 0 412 234 105 23 chr2 35721901 35722072 -214965782 - L1MC4a LINE L1 -1924 5884 5700 277 320 60 10 chr2 35722500 35722600 -214965254 - MER5A DNA MER1_type -82 107 3 1556 240 86 31 chr2 35722847 35723302 -214964552 + MLT2B1 LTR ERVL 1 480 -40 2464 80 11 25 chr2 35723429 35723832 -214964022 + LTR7 LTR ERV1 1 442 -8 15127 117 14 23 chr2 35723840 35726720 -214961134 + HERVH LTR ERV1 1 2987 -4726 911 135 7 0 chr2 35726714 35726862 -214960992 + HERVH LTR ERV1 3140 3288 -4425 * 3184 121 18 6 chr2 35726854 35727350 -214960504 + HERVH LTR ERV1 3492 3993 -3720 1182 118 38 0 chr2 35727352 35727538 -214960316 + HERVH LTR ERV1 4488 4680 -3033 * 4170 93 2 2 chr2 35727524 35728136 -214959718 + HERVH LTR ERV1 5769 6380 -1333 * 7579 103 37 5 chr2 35728109 35729249 -214958605 + HERVH LTR ERV1 6529 7704 -9 2752 87 90 2 chr2 35729255 35729667 -214958187 + LTR7 LTR ERV1 1 448 -2 275 198 18 18 chr2 35729885 35729996 -214957858 + (TA)n Simple_repeat Simple_repeat 1 111 0 26 0 0 0 chr2 35730581 35730607 -214957247 + AT_rich Low_complexity Low_complexity 1 26 0 302 45 23 0 chr2 35730667 35730711 -214957143 + (CA)n Simple_repeat Simple_repeat 2 46 0 269 271 177 57 chr2 35731099 35731291 -214956563 + MIR SINE MIR 21 235 -27 25 31 0 0 chr2 35731392 35731424 -214956430 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 35731905 35731927 -214955927 + AT_rich Low_complexity Low_complexity 1 22 0 1361 157 62 115 chr2 35732064 35732421 -214955433 + MER7A DNA MER2_type 1 336 -10 220 349 132 8 chr2 35734479 35734608 -214953246 + MIR SINE MIR 20 164 -98 2741 76 98 2 chr2 35734608 35735017 -214952837 - LTR7 LTR ERV1 -2 448 1 2333 111 48 13 chr2 35735017 35735396 -214952458 - HERVH LTR ERV1 0 7713 7322 1320 148 19 0 chr2 35735394 35735610 -214952244 - HERVH LTR ERV1 -1894 5819 5600 * 4353 137 6 1 chr2 35735611 35736270 -214951584 - HERVH LTR ERV1 -2564 5149 4488 3197 120 10 8 chr2 35736264 35736772 -214951082 - HERVH LTR ERV1 -3713 4000 3492 * 912 129 27 0 chr2 35736762 35736909 -214950945 - HERVH LTR ERV1 -4423 3290 3140 * 17363 111 43 53 chr2 35736906 35739920 -214947934 - HERVH LTR ERV1 -4729 2984 1 2403 138 95 7 chr2 35739922 35740334 -214947520 - LTR7 LTR ERV1 -2 448 1 2392 84 0 0 chr2 35742659 35742955 -214944899 + AluSq SINE Alu 2 297 -16 1973 216 90 4 chr2 35742963 35743441 -214944413 - LTR53 LTR ERVL 0 519 1 23 0 0 0 chr2 35745019 35745042 -214942812 + AT_rich Low_complexity Low_complexity 1 23 0 203 146 24 0 chr2 35745420 35745461 -214942393 + (CA)n Simple_repeat Simple_repeat 1 42 0 2215 71 35 3 chr2 35745630 35745913 -214941941 + AluY SINE Alu 3 294 -17 490 246 58 0 chr2 35745924 35746095 -214941759 - L1MA7 LINE L1 -4 6287 6107 410 332 72 21 chr2 35746850 35747043 -214940811 - MIR SINE MIR -1 261 59 1806 127 3 48 chr2 35747043 35747210 -214940644 - AluSc SINE Alu -9 300 152 225 0 0 0 chr2 35747210 35747235 -214940619 + (TA)n Simple_repeat Simple_repeat 1 25 0 1806 127 3 48 chr2 35747235 35747381 -214940473 - AluSc SINE Alu -157 152 1 339 304 81 71 chr2 35747457 35747766 -214940088 - MLT1J LTR MaLR -65 446 135 414 296 67 67 chr2 35748185 35748329 -214939525 - L2 LINE L2 0 3313 3167 230 81 27 0 chr2 35748329 35748366 -214939488 + (TA)n Simple_repeat Simple_repeat 2 39 0 414 296 67 67 chr2 35748366 35748461 -214939393 - L2 LINE L2 -145 3168 3074 450 225 30 6 chr2 35749141 35749310 -214938544 + (TA)n Simple_repeat Simple_repeat 1 173 0 496 289 6 33 chr2 35749328 35749508 -214938346 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 196 238 33 33 chr2 35749551 35749702 -214938152 + (CATATA)n Simple_repeat Simple_repeat 2 152 0 274 248 6 25 chr2 35749717 35749874 -214937980 + (CA)n Simple_repeat Simple_repeat 1 154 0 239 310 0 30 chr2 35749886 35749986 -214937868 + (CA)n Simple_repeat Simple_repeat 2 98 0 214 229 0 24 chr2 35749998 35750081 -214937773 + (CA)n Simple_repeat Simple_repeat 2 82 0 213 220 0 20 chr2 35750093 35750143 -214937711 + (CA)n Simple_repeat Simple_repeat 2 50 0 421 285 0 34 chr2 35750158 35750517 -214937337 + (CA)n Simple_repeat Simple_repeat 1 346 0 259 264 0 29 chr2 35750529 35750703 -214937151 + (CA)n Simple_repeat Simple_repeat 2 170 0 305 286 0 31 chr2 35750715 35750813 -214937041 + (CA)n Simple_repeat Simple_repeat 2 96 0 507 256 0 87 chr2 35750825 35751020 -214936834 + (CA)n Simple_repeat Simple_repeat 2 179 0 236 247 0 67 chr2 35751021 35751110 -214936744 - L1MC4 LINE L1 -1345 6697 6615 261 139 0 0 chr2 35751165 35751208 -214936646 + (CA)n Simple_repeat Simple_repeat 2 44 0 927 209 121 41 chr2 35751223 35751538 -214936316 - MER2 DNA MER2_type -3 341 2 453 110 0 0 chr2 35751539 35751612 -214936242 + (TG)n Simple_repeat Simple_repeat 2 74 0 249 314 40 32 chr2 35752254 35752378 -214935476 + MIR SINE MIR 8 132 -130 23 0 0 0 chr2 35752732 35752755 -214935099 + AT_rich Low_complexity Low_complexity 1 23 0 1091 148 23 51 chr2 35752836 35753052 -214934802 - THE1B LTR MaLR 0 364 155 5024 17 2 0 chr2 35753052 35753629 -214934225 + L1HS LINE L1 5577 6154 -1 216 149 0 0 chr2 35753632 35753679 -214934175 + (A)n Simple_repeat Simple_repeat 1 47 0 988 124 98 0 chr2 35753679 35753832 -214934022 - THE1B LTR MaLR -196 168 1 542 324 55 66 chr2 35753914 35754383 -214933471 + L1M4 LINE L1 3553 4016 -2130 26 0 0 0 chr2 35754557 35754583 -214933271 + AT_rich Low_complexity Low_complexity 1 26 0 2911 155 20 65 chr2 35755429 35756069 -214931785 + LTR38B LTR ERV1 1 611 0 23 0 0 0 chr2 35756435 35756458 -214931396 + AT_rich Low_complexity Low_complexity 1 23 0 221 184 0 20 chr2 35756763 35756812 -214931042 + GA-rich Low_complexity Low_complexity 1 48 0 524 248 57 0 chr2 35758375 35758516 -214929338 - Charlie1b DNA MER1_type -326 197 49 328 236 55 0 chr2 35758845 35758972 -214928882 + (TA)n Simple_repeat Simple_repeat 2 135 0 21 0 0 0 chr2 35759057 35759078 -214928776 + AT_rich Low_complexity Low_complexity 1 21 0 315 239 0 14 chr2 35760215 35760286 -214927568 - MLT1C LTR MaLR 0 467 398 2134 114 7 7 chr2 35760638 35760945 -214926909 + AluSx SINE Alu 1 307 -5 446 331 8 8 chr2 35761072 35761199 -214926655 - L2 LINE L2 -5 3308 3182 363 338 60 66 chr2 35761453 35762037 -214925817 + L2 LINE L2 2478 3055 -217 10114 185 73 4 chr2 35762194 35764480 -214923374 - L1 LINE L1 -1004 6561 4118 3320 183 29 19 chr2 35764481 35765103 -214922751 - L1 LINE L1 -6886 679 52 241 305 57 43 chr2 35765948 35766089 -214921765 + MIR SINE MIR 76 218 -44 28 61 0 0 chr2 35766124 35766173 -214921681 + AT_rich Low_complexity Low_complexity 1 49 0 199 120 20 20 chr2 35767229 35767279 -214920575 + GA-rich Low_complexity Low_complexity 2 51 0 230 139 0 0 chr2 35767279 35767315 -214920539 + (GGA)n Simple_repeat Simple_repeat 3 38 0 603 210 12 6 chr2 35767316 35767483 -214920371 + GA-rich Low_complexity Low_complexity 1 168 0 5911 206 26 14 chr2 35767952 35768588 -214919266 + L1PA16 LINE L1 3787 4414 -1752 1881 138 58 25 chr2 35768588 35768951 -214918903 + THE1C LTR MaLR 1 375 0 5911 206 26 14 chr2 35768951 35770666 -214917188 + L1PA16 LINE L1 4414 6160 -6 1443 208 47 38 chr2 35770666 35771007 -214916847 + L1MC3 LINE L1 7091 7434 -351 4337 188 22 3 chr2 35771023 35771923 -214915931 + L1MA4 LINE L1 3679 4595 -1551 * 4594 193 66 2 chr2 35771918 35772106 -214915748 + L1MA4 LINE L1 5101 5275 -1025 411 21 0 0 chr2 35772106 35772154 -214915700 + (CAT)n Simple_repeat Simple_repeat 2 49 0 4594 193 66 2 chr2 35772154 35772198 -214915656 + L1MA4 LINE L1 5275 5315 -985 2966 106 33 31 chr2 35772198 35772681 -214915173 - L1PA14 LINE L1 -9 6152 5669 4594 193 66 2 chr2 35772681 35773588 -214914266 + L1MA4 LINE L1 5315 6288 -12 912 187 34 5 chr2 35773941 35774160 -214913694 + L1MC3 LINE L1 6110 6333 -11 26 50 0 0 chr2 35775191 35775231 -214912623 + AT_rich Low_complexity Low_complexity 1 40 0 293 254 64 27 chr2 35775624 35775734 -214912120 - MER96B DNA MER1_type? -10 407 294 25 99 0 0 chr2 35775851 35775932 -214911922 + AT_rich Low_complexity Low_complexity 1 81 0 25 0 0 0 chr2 35776006 35776031 -214911823 + AT_rich Low_complexity Low_complexity 1 25 0 1598 177 35 29 chr2 35776031 35776341 -214911513 + AluJo SINE Alu 1 312 0 239 179 18 0 chr2 35776342 35776398 -214911456 + L1MA3 LINE L1 6249 6305 0 580 251 78 14 chr2 35776468 35776687 -214911167 + MER96B DNA MER1_type? 185 417 0 793 170 0 14 chr2 35778064 35778205 -214909649 - L1PB4 LINE L1 -12 6144 6006 1129 261 61 71 chr2 35778218 35778708 -214909146 - MLT2B1 LTR ERVL -34 486 2 502 191 0 0 chr2 35778708 35778802 -214909052 + MLT1D LTR MaLR 408 501 -4 5028 162 16 15 chr2 35778884 35779265 -214908589 - L1PBa LINE L1 -2837 4025 3646 2258 75 3 0 chr2 35779265 35779557 -214908297 - AluY SINE Alu -16 295 3 5028 162 16 15 chr2 35779557 35782373 -214905481 - L1PBa LINE L1 -3216 3646 618 1054 197 5 0 chr2 35782351 35782549 -214905305 - L1PBa LINE L1 -6663 200 2 * 348 245 46 22 chr2 35782634 35782758 -214905096 + MER63 DNA MER1_type 1 750 -86 187 343 39 10 chr2 35782898 35783000 -214904854 + L2 LINE L2 2272 2376 -938 1050 248 79 57 chr2 35783083 35783539 -214904315 + MLT1C LTR MaLR 1 466 -1 324 394 59 36 chr2 35783620 35784008 -214903846 + L2 LINE L2 2872 3268 -4 237 178 0 0 chr2 35785196 35785241 -214902613 + (CA)n Simple_repeat Simple_repeat 2 46 0 301 154 64 6 chr2 35785681 35785738 -214902116 + (TA)n Simple_repeat Simple_repeat 1 53 -112 2503 171 28 6 chr2 35785738 35786236 -214901618 - L1MA5 LINE L1 -6 6294 5786 301 154 64 6 chr2 35786236 35786334 -214901520 + (TA)n Simple_repeat Simple_repeat 53 165 0 2618 163 59 12 chr2 35786338 35786943 -214900911 - L1MA5 LINE L1 -509 5791 5164 19626 180 22 24 chr2 35787006 35791160 -214896694 + L1MA1 LINE L1 1 4161 -3555 264 209 0 0 chr2 35791160 35791203 -214896651 - 5S rRNA rRNA -78 43 1 19626 180 22 24 chr2 35791203 35791821 -214896033 + L1MA1 LINE L1 4161 4779 -2937 2397 72 0 7 chr2 35791821 35792125 -214895729 - AluY SINE Alu -9 302 1 19626 180 22 24 chr2 35792125 35794918 -214892936 + L1MA1 LINE L1 4779 7545 -171 400 175 0 0 chr2 35794918 35794998 -214892856 - MADE1 DNA Mariner 0 80 1 19626 180 22 24 chr2 35794998 35795170 -214892684 + L1MA1 LINE L1 7545 7716 0 24 32 0 0 chr2 35795170 35795201 -214892653 + AT_rich Low_complexity Low_complexity 1 31 0 1926 181 24 3 chr2 35795546 35795928 -214891926 - MLT1B LTR MaLR 0 390 1 400 304 110 13 chr2 35796783 35797010 -214890844 - MIR SINE MIR -5 257 9 1473 149 8 12 chr2 35797296 35797544 -214890310 - AluSx SINE Alu -16 296 50 195 204 0 0 chr2 35797582 35797631 -214890223 + (CA)n Simple_repeat Simple_repeat 1 49 0 2869 323 107 62 chr2 35798039 35798734 -214889120 - L2 LINE L2 0 3313 2651 266 164 0 49 chr2 35798734 35798795 -214889059 + L1MA9 LINE L1 6225 6282 -30 2869 323 107 62 chr2 35798795 35800950 -214886904 - L2 LINE L2 -662 2651 256 275 298 35 70 chr2 35802383 35802497 -214885357 - MIR SINE MIR -137 125 16 189 0 0 0 chr2 35803053 35803074 -214884780 + (CAGT)n Simple_repeat Simple_repeat 4 24 0 204 233 17 0 chr2 35803931 35803991 -214883863 + (TTTG)n Simple_repeat Simple_repeat 3 63 0 2117 155 19 16 chr2 35804753 35805127 -214882727 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr2 35805866 35805890 -214881964 + AT_rich Low_complexity Low_complexity 1 24 0 1982 111 27 0 chr2 35806175 35806473 -214881381 - L1PA13 LINE L1 0 6163 5858 380 355 44 47 chr2 35806789 35807085 -214880769 + L3 LINE CR1 1279 1573 -4 733 286 112 0 chr2 35808286 35808510 -214879344 + MIR SINE MIR 1 249 -13 186 196 54 18 chr2 35809411 35809467 -214878387 - MER5C DNA MER1_type -114 210 153 1708 127 0 4 chr2 35809467 35809766 -214878088 - AluSx SINE Alu 0 348 51 23 20 0 61 chr2 35810280 35810329 -214877525 + AT_rich Low_complexity Low_complexity 1 46 0 255 298 0 0 chr2 35811057 35811114 -214876740 + L2 LINE L2 3214 3270 -2 462 269 22 0 chr2 35811289 35811423 -214876431 + L1MB7 LINE L1 22 158 -6384 2371 243 15 19 chr2 35811451 35812125 -214875729 + L1MB7 LINE L1 4116 4786 -1858 3241 226 51 6 chr2 35812138 35812956 -214874898 + L1MB7 LINE L1 5827 6681 -1 302 175 12 25 chr2 35814167 35814247 -214873607 - L1ME2 LINE L1 -1 6163 6085 731 274 33 62 chr2 35814261 35814358 -214873496 - L1MCc LINE L1 -2421 4520 4422 2270 121 0 0 chr2 35814358 35814665 -214873189 + AluSg SINE Alu 1 307 -3 731 274 33 62 chr2 35814665 35815019 -214872835 - L1MCc LINE L1 -2519 4422 4082 1534 306 74 34 chr2 35815062 35816934 -214870920 - L1MCc LINE L1 -4163 2959 807 1042 79 23 17 chr2 35817316 35817493 -214870361 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 213 121 0 0 chr2 35817495 35817528 -214870326 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 412 235 77 77 chr2 35817530 35817551 -214870303 - L1MCc LINE L1 -5975 448 428 1928 135 21 0 chr2 35817551 35817839 -214870015 - AluSq SINE Alu -19 294 1 412 235 77 77 chr2 35817839 35817987 -214869867 - L1MCc LINE L1 -5994 429 279 378 236 47 16 chr2 35817990 35818117 -214869737 - L1MCc LINE L1 -6254 169 39 386 274 91 48 chr2 35818182 35818390 -214869464 - L1MEc LINE L1 -4127 2269 2053 2327 98 0 0 chr2 35818408 35818715 -214869139 - AluSg SINE Alu -3 307 1 21 0 0 0 chr2 35818715 35818736 -214869118 + AT_rich Low_complexity Low_complexity 1 21 0 6300 164 19 5 chr2 35818736 35820852 -214867002 - L1MA1 LINE L1 -4 7717 5496 6100 195 42 16 chr2 35820853 35822114 -214865740 - L1MA1 LINE L1 -6256 1309 16 1449 325 49 60 chr2 35822121 35823297 -214864557 - L1MEc LINE L1 -4330 2066 918 2152 146 14 30 chr2 35823297 35823667 -214864187 + THE1B LTR MaLR 1 364 0 1449 325 49 60 chr2 35823667 35824540 -214863314 - L1MEc LINE L1 -5478 918 38 22 0 0 0 chr2 35824839 35824861 -214862993 + AT_rich Low_complexity Low_complexity 1 22 0 37 23 0 0 chr2 35825106 35825150 -214862704 + AT_rich Low_complexity Low_complexity 1 44 0 198 303 0 135 chr2 35828425 35828514 -214859340 + L2 LINE L2 3100 3176 -96 239 271 0 0 chr2 35829071 35829121 -214858733 + polypyrimidine Low_complexity Low_complexity 1 50 0 234 219 0 0 chr2 35829724 35829788 -214858066 + CT-rich Low_complexity Low_complexity 2 65 0 1274 198 0 0 chr2 35831349 35831597 -214856257 - L1PA13 LINE L1 -4 6159 5912 22 0 0 0 chr2 35832150 35832172 -214855682 + AT_rich Low_complexity Low_complexity 1 22 0 210 222 0 0 chr2 35833089 35833143 -214854711 + (TA)n Simple_repeat Simple_repeat 1 54 0 191 383 62 13 chr2 35833160 35833387 -214854467 + L2 LINE L2 2638 2875 -439 792 261 8 19 chr2 35833536 35833804 -214854050 - L1MA9 LINE L1 -34 6278 6014 299 391 31 12 chr2 35833952 35834113 -214853741 + L2 LINE L2 3109 3272 0 485 343 116 0 chr2 35835263 35835496 -214852358 + MIR SINE MIR 3 262 0 447 19 0 0 chr2 35836257 35836309 -214851545 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 1733 66 9 0 chr2 35836690 35836918 -214850936 + L1PA8 LINE L1 5939 6168 -4 333 0 0 0 chr2 35837369 35837406 -214850448 + (TG)n Simple_repeat Simple_repeat 2 38 0 1862 59 0 0 chr2 35837833 35838054 -214849800 - AluY SINE Alu -11 300 80 355 217 14 0 chr2 35839150 35839219 -214848635 - MIR SINE MIR -42 220 151 258 314 121 7 chr2 35840264 35840404 -214847450 + MIR SINE MIR 32 187 -75 314 23 23 0 chr2 35841596 35841639 -214846215 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 257 297 141 49 chr2 35841650 35841835 -214846019 + MIR SINE MIR 31 232 -30 2015 151 3 0 chr2 35841840 35842151 -214845703 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 35843322 35843344 -214844510 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 35843572 35843593 -214844261 + AT_rich Low_complexity Low_complexity 1 21 0 536 255 82 20 chr2 35844992 35845188 -214842666 + MIR SINE MIR 54 261 -1 993 172 47 31 chr2 35845662 35845891 -214841963 - AluJo SINE Alu 0 318 87 395 209 9 0 chr2 35846005 35846115 -214841739 + (CA)n Simple_repeat Simple_repeat 2 112 0 1198 141 51 39 chr2 35846276 35846532 -214841322 + MER44D DNA MER2_type 1 529 -80 229 114 0 0 chr2 35846548 35846592 -214841262 + LTR66 LTR ERVL 394 437 -173 471 218 0 0 chr2 35846611 35846698 -214841156 + MER44D DNA MER2_type 523 609 0 274 298 111 41 chr2 35847086 35847257 -214840597 - MIR SINE MIR -11 251 69 211 310 101 39 chr2 35847513 35847642 -214840212 + MIR SINE MIR 68 204 -58 241 257 14 0 chr2 35847761 35847835 -214840019 + A-rich Low_complexity Low_complexity 2 76 0 2181 94 3 3 chr2 35847978 35848276 -214839578 - AluSg SINE Alu -12 298 1 1105 248 64 15 chr2 35848511 35848838 -214839016 + MLT1A1 LTR MaLR 12 354 -11 272 414 101 11 chr2 35848845 35849123 -214838731 - L2 LINE L2 -42 3230 2928 358 108 46 15 chr2 35849235 35849300 -214838554 - L1MB5 LINE L1 -12 6162 6096 962 205 79 68 chr2 35849385 35849795 -214838059 + MER66A LTR ERV1 97 465 -13 1442 224 32 1 chr2 35849866 35850181 -214837673 - L1MB5 LINE L1 -74 6100 5778 2045 228 20 13 chr2 35850207 35850752 -214837102 + L1PA15-16 LINE L1 2075 2623 -4226 2152 202 13 40 chr2 35850822 35851240 -214836614 + L1PA15-16 LINE L1 4070 4475 -2374 2228 116 0 0 chr2 35851240 35851543 -214836311 + AluSc SINE Alu 1 303 -6 2152 202 13 40 chr2 35851543 35851600 -214836254 + L1PA15-16 LINE L1 4475 4532 -2317 830 219 72 39 chr2 35851601 35851907 -214835947 + L1ME2 LINE L1 4545 4860 -1286 * 1768 240 50 27 chr2 35851901 35852426 -214835428 - L1MD2 LINE L1 0 6359 5823 5022 181 37 51 chr2 35852888 35854170 -214833684 - L1MC1 LINE L1 -1 6332 5071 753 278 68 36 chr2 35854173 35854482 -214833372 - L1MC1 LINE L1 -1793 4353 4035 1969 89 0 25 chr2 35855139 35855419 -214832435 - AluY SINE Alu -13 298 26 268 158 53 0 chr2 35856664 35856759 -214831095 + (TA)n Simple_repeat Simple_repeat 1 100 0 2305 266 39 30 chr2 35857016 35857706 -214830148 - L1ME1 LINE L1 -11 6155 5448 2137 100 0 0 chr2 35857706 35857986 -214829868 + AluSq SINE Alu 6 285 -28 2305 266 39 30 chr2 35857986 35858489 -214829365 - L1ME1 LINE L1 -718 5448 4951 2395 230 51 48 chr2 35858493 35859517 -214828337 + L1ME2 LINE L1 5122 6145 -19 232 229 34 42 chr2 35859840 35859958 -214827896 + L1ME3 LINE L1 6045 6161 -1 499 211 11 22 chr2 35862738 35862918 -214824936 + CT-rich Low_complexity Low_complexity 3 180 0 223 322 7 105 chr2 35863492 35863644 -214824210 + L3 LINE CR1 1440 1576 -1 7831 199 49 19 chr2 35864542 35866187 -214821667 - MER89-int LTR ERV1 -2646 4030 2336 * 9853 184 50 41 chr2 35866175 35867561 -214820293 - MER89-int LTR ERV1 -4507 2169 755 13019 30 6 0 chr2 35867561 35869903 -214817951 + L1PA3 LINE L1 3810 6152 -3 9853 184 50 41 chr2 35869903 35870643 -214817211 - MER89-int LTR ERV1 -5921 755 23 226 235 20 0 chr2 35870684 35870735 -214817119 - MER3 DNA MER1_type -126 83 32 27 29 0 0 chr2 35871345 35871379 -214816475 + AT_rich Low_complexity Low_complexity 1 34 0 28 61 0 0 chr2 35871463 35871512 -214816342 + AT_rich Low_complexity Low_complexity 1 49 0 2403 94 0 0 chr2 35872187 35872496 -214815358 - AluSc SINE Alu 0 309 1 284 329 42 35 chr2 35872558 35872701 -214815153 + MIR SINE MIR 37 180 -82 216 182 0 0 chr2 35872721 35872765 -214815089 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 400 332 89 26 chr2 35872856 35873046 -214814808 - MIR SINE MIR -35 227 26 2411 74 3 3 chr2 35873190 35873501 -214814353 - AluSp SINE Alu 0 313 3 218 230 129 72 chr2 35873927 35874066 -214813788 + L2 LINE L2 1853 1999 -1315 1512 234 25 50 chr2 35874195 35874242 -214813612 - MER89 LTR ERV1 0 559 512 1833 166 65 38 chr2 35874242 35874659 -214813195 - MSTC LTR MaLR 0 428 1 1512 234 25 50 chr2 35874659 35875009 -214812845 - MER89 LTR ERV1 -47 512 172 22 35 0 0 chr2 35876043 35876072 -214811782 + AT_rich Low_complexity Low_complexity 1 29 0 2020 216 115 42 chr2 35876109 35876846 -214811008 - L1ME3 LINE L1 -117 6045 5255 833 195 22 0 chr2 35877265 35877450 -214810404 + L1MA6 LINE L1 6112 6300 0 25 65 0 0 chr2 35877623 35877669 -214810185 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr2 35877830 35877854 -214810000 + AT_rich Low_complexity Low_complexity 1 24 0 287 276 19 38 chr2 35878104 35878209 -214809645 - MER94 DNA DNA -22 112 10 421 315 47 29 chr2 35878227 35878470 -214809384 - L1ME LINE L1 -587 5579 5336 258 275 50 75 chr2 35880981 35881101 -214806753 - L2 LINE L2 0 3272 3156 901 311 108 18 chr2 35881314 35881512 -214806342 + L1MB7 LINE L1 1034 1213 -5171 309 51 0 0 chr2 35881512 35881551 -214806303 + (CA)n Simple_repeat Simple_repeat 2 40 0 901 311 108 18 chr2 35881551 35882027 -214805827 + L1MB7 LINE L1 1213 1769 -4615 526 289 119 32 chr2 35882039 35882351 -214805503 + L1MB7 LINE L1 2036 2374 -4189 7285 43 51 23 chr2 35882445 35883406 -214804448 - L1PA5 LINE L1 -6 6148 5183 1101 174 22 84 chr2 35883407 35883731 -214804123 - MER67D LTR ERV1 -243 271 5 5103 183 18 4 chr2 35883831 35885122 -214802732 + L1PA16 LINE L1 4852 6166 0 382 285 80 0 chr2 35885126 35885277 -214802577 + L1MB7 LINE L1 4090 4252 -2130 254 266 25 0 chr2 35885349 35885428 -214802426 - LTR66 LTR ERVL -136 474 394 297 204 24 175 chr2 35885446 35885657 -214802197 + L1MB7 LINE L1 4400 4578 -1804 241 188 29 58 chr2 35885728 35885797 -214802057 + MER82 DNA MER2_type 32 98 -555 21 0 0 0 chr2 35885849 35885870 -214801984 + AT_rich Low_complexity Low_complexity 1 21 0 257 400 27 13 chr2 35885889 35886039 -214801815 - MIR SINE MIR -110 152 1 944 280 0 5 chr2 35886069 35886280 -214801574 + MER82 DNA MER2_type 444 653 0 2328 266 54 25 chr2 35886280 35886396 -214801458 + L1MB7 LINE L1 4647 4758 -1662 2228 91 7 23 chr2 35886396 35886703 -214801151 - AluSx SINE Alu -10 302 1 2328 266 54 25 chr2 35886703 35888305 -214799549 + L1MB7 LINE L1 4758 6410 -10 550 354 6 0 chr2 35888980 35889144 -214798710 + MER58A DNA MER1_type 1 165 0 1252 216 4 30 chr2 35889453 35889722 -214798132 + AluJo SINE Alu 6 267 -45 202 200 0 0 chr2 35889785 35889807 -214798047 + (TTA)n Simple_repeat Simple_repeat 3 24 -23 2084 139 47 85 chr2 35889807 35890252 -214797602 - MSTA LTR MaLR 0 428 1 202 200 0 0 chr2 35890252 35890274 -214797580 + (TTA)n Simple_repeat Simple_repeat 23 47 0 32 26 0 0 chr2 35890680 35890719 -214797135 + AT_rich Low_complexity Low_complexity 1 39 0 924 136 0 0 chr2 35891841 35891973 -214795881 - AluSq/x SINE Alu -180 132 1 250 397 40 16 chr2 35894116 35894242 -214793612 - L2 LINE L2 -15 3257 3129 2124 96 14 0 chr2 35894443 35894734 -214793120 + AluSc SINE Alu 4 298 -11 1063 212 141 8 chr2 35894752 35895007 -214792847 + AluJb SINE Alu 1 289 -13 398 345 77 45 chr2 35895112 35895674 -214792180 + L3 LINE CR1 427 1006 -571 377 186 39 54 chr2 35895681 35895810 -214792044 - Charlie5 DNA MER1_type -134 2478 2352 1481 135 239 24 chr2 35895910 35896244 -214791610 + MSTA LTR MaLR 1 406 -22 552 208 69 52 chr2 35896255 35896486 -214791368 - L1MA9 LINE L1 -176 6136 5902 21 0 0 0 chr2 35896488 35896509 -214791345 + AT_rich Low_complexity Low_complexity 1 21 0 247 380 141 16 chr2 35896515 35896955 -214790899 + L3 LINE CR1 980 1474 -103 259 307 57 0 chr2 35897179 35897267 -214790587 + L2 LINE L2 3221 3313 0 403 249 160 6 chr2 35897573 35897754 -214790100 + L1MEd LINE L1 947 1155 -4964 476 45 15 0 chr2 35898009 35898076 -214789778 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 287 170 38 0 chr2 35898076 35898129 -214789725 - L1MA9 LINE L1 -53 6259 6205 237 65 0 0 chr2 35898197 35898228 -214789626 + (TG)n Simple_repeat Simple_repeat 2 32 0 514 395 40 5 chr2 35899219 35899622 -214788232 + ERVL LTR ERVL 4521 4937 -827 753 348 26 19 chr2 35900189 35900499 -214787355 + LTR16A LTR ERVL 123 434 -16 1988 266 50 30 chr2 35900676 35901429 -214786425 + L1ME1 LINE L1 5127 5896 -270 13603 149 27 12 chr2 35901429 35903807 -214784047 - Tigger1 DNA MER2_type 0 2418 5 1988 266 50 30 chr2 35903807 35903986 -214783868 + L1ME1 LINE L1 5896 6070 -96 46 0 0 0 chr2 35904047 35904093 -214783761 + AT_rich Low_complexity Low_complexity 1 46 0 213 233 0 0 chr2 35904112 35904155 -214783699 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 929 152 104 135 chr2 35905410 35905707 -214782147 + AluJo SINE Alu 1 288 -14 2227 81 20 0 chr2 35906006 35906301 -214781553 + AluY SINE Alu 1 301 -10 1985 167 26 5 chr2 35907643 35908020 -214779834 + L1MA6 LINE L1 5916 6300 0 602 95 0 5 chr2 35908665 35908676 -214779178 + L1P4 LINE L1 5383 5393 -772 3838 126 32 3 chr2 35908676 35908976 -214778878 - L1PA15 LINE L1 -6 6159 5869 2176 52 0 4 chr2 35908976 35909247 -214778607 + AluY SINE Alu 37 306 -5 3838 126 32 3 chr2 35909247 35909563 -214778291 - L1PA15 LINE L1 -296 5869 5525 602 95 0 5 chr2 35909563 35909650 -214778204 + L1P4 LINE L1 5393 5477 -688 1467 207 97 0 chr2 35910849 35911158 -214776696 + MER7A DNA MER2_type 10 346 0 21 36 0 0 chr2 35911293 35911321 -214776533 + AT_rich Low_complexity Low_complexity 1 28 0 1300 267 71 58 chr2 35911827 35912221 -214775633 + L1MC4a LINE L1 4901 4801 -1345 2281 107 3 0 chr2 35912221 35912529 -214775325 + AluSx SINE Alu 1 309 -3 1300 267 71 58 chr2 35912529 35913059 -214774795 + L1MC4a LINE L1 4800 5322 -824 1365 294 85 41 chr2 35913169 35913758 -214774096 + MER50 LTR ERV1 26 640 -94 836 259 137 31 chr2 35913836 35914391 -214773463 + L1MC4a LINE L1 5854 6467 -1341 6336 191 26 19 chr2 35915662 35917965 -214769889 - L1PB4 LINE L1 -4 7214 4895 666 255 48 76 chr2 35917990 35918425 -214769429 - L1PB4 LINE L1 -4876 2333 1911 450 332 93 42 chr2 35918459 35919109 -214768745 - L1PB4 LINE L1 -5258 1951 1 192 125 47 31 chr2 35919142 35919206 -214768648 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 2816 60 2 3 chr2 35919334 35919846 -214768008 - L1P2 LINE L1 -631 5524 5015 797 88 0 26 chr2 35919830 35919944 -214767910 + L1P2 LINE L1 4911 5021 -1125 * 978 282 65 17 chr2 35919942 35920407 -214767447 + L1MC2 LINE L1 3585 4071 -2075 470 285 42 0 chr2 35920410 35920575 -214767279 + L1MC2 LINE L1 4109 4280 -1866 1352 246 39 62 chr2 35920722 35921238 -214766616 + L1MC2 LINE L1 4845 5348 -798 9303 117 53 3 chr2 35921338 35922769 -214765085 - THE1B-int LTR MaLR -78 1502 1 385 82 0 0 chr2 35922771 35922820 -214765034 - THE1B LTR MaLR -2 362 314 729 256 6 0 chr2 35922821 35922989 -214764865 + L1MC2 LINE L1 5677 5845 -499 823 184 14 48 chr2 35922991 35923198 -214764656 + L1MC2 LINE L1 6134 6333 -11 26 50 0 0 chr2 35923337 35923377 -214764477 + AT_rich Low_complexity Low_complexity 1 40 0 265 197 0 42 chr2 35923518 35923589 -214764265 + (TA)n Simple_repeat Simple_repeat 1 68 0 494 354 92 0 chr2 35923703 35923943 -214763911 - MIR SINE MIR 0 262 1 271 347 111 31 chr2 35925256 35925544 -214762310 + L2 LINE L2 1357 1667 -1647 536 255 58 82 chr2 35925727 35926293 -214761561 + L1ME3A LINE L1 5011 5565 -601 1964 194 8 0 chr2 35926307 35926688 -214761166 - L1PA16 LINE L1 0 6166 5783 195 49 73 0 chr2 35926689 35926730 -214761124 + (TA)n Simple_repeat Simple_repeat 1 44 0 382 138 0 0 chr2 35926734 35926799 -214761055 - L1PA16 LINE L1 -380 5788 5724 326 280 112 11 chr2 35926911 35927110 -214760744 + L1ME3A LINE L1 5727 5945 -217 188 304 0 0 chr2 35927742 35927788 -214760066 - MIR SINE MIR -111 151 106 2095 302 130 37 chr2 35927954 35929522 -214758332 - L2 LINE L2 0 3313 1557 1061 197 5 0 chr2 35929799 35929987 -214757867 - MLT1B LTR MaLR 0 390 202 1410 204 86 10 chr2 35930310 35930623 -214757231 - MLT1A1 LTR MaLR 0 365 29 3340 93 10 18 chr2 35930623 35931118 -214756736 + L1PA13 LINE L1 5671 6161 -2 2397 53 0 43 chr2 35933145 35933468 -214754386 - AluY SINE Alu -2 309 1 392 278 110 38 chr2 35935303 35935512 -214752342 - LTR41 LTR ERVL -1 772 549 521 282 39 11 chr2 35935668 35935849 -214752005 - LTR41 LTR ERVL -586 187 2 189 297 27 27 chr2 35936403 35936477 -214751377 + MIR SINE MIR 32 105 -157 374 302 147 41 chr2 35936805 35937146 -214750708 - L1ME3 LINE L1 -300 5931 5551 7452 35 0 3 chr2 35937172 35938361 -214749493 + L1PA4 LINE L1 4970 6155 0 315 236 16 98 chr2 35938413 35938536 -214749318 - L1ME3 LINE L1 -962 5466 5354 368 300 97 24 chr2 35938856 35939279 -214748575 - L1ME3 LINE L1 -1301 4914 4461 2090 153 8 16 chr2 35939607 35939985 -214747869 + THE1C LTR MaLR 1 375 0 350 312 52 13 chr2 35940237 35940391 -214747463 - L1ME3 LINE L1 -6114 282 123 695 248 57 27 chr2 35940725 35941056 -214746798 + L1M4 LINE L1 2203 2543 -3603 591 236 88 73 chr2 35941069 35941327 -214746527 + MLT1E2 LTR MaLR 4 242 -263 1226 271 48 28 chr2 35941342 35941740 -214746114 + MLT1E2 LTR MaLR 221 626 0 2409 246 128 46 chr2 35941748 35943223 -214744631 + L1M4 LINE L1 2558 4153 -1993 242 174 22 0 chr2 35943224 35943270 -214744584 + Alu SINE Alu 120 166 -136 1849 182 16 148 chr2 35943270 35943912 -214743942 + LTR6A LTR ERV1 1 563 -1 1942 108 0 37 chr2 35943912 35944207 -214743647 + AluSx SINE Alu 27 310 -2 1450 269 108 21 chr2 35944214 35945036 -214742818 + L1M4 LINE L1 4143 5036 -1110 1963 151 35 12 chr2 35945057 35945379 -214742475 - THE1B LTR MaLR 0 364 32 218 56 28 0 chr2 35945379 35945415 -214742439 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1963 151 35 12 chr2 35945415 35945436 -214742418 - THE1B LTR MaLR -332 32 13 811 203 46 10 chr2 35945436 35945488 -214742366 + L1M4 LINE L1 5087 5136 -1028 2077 88 7 14 chr2 35945488 35945785 -214742069 + AluSc SINE Alu 1 295 -14 811 203 46 10 chr2 35945785 35946059 -214741795 + L1M4 LINE L1 5136 5426 -738 1041 264 106 10 chr2 35946061 35946542 -214741312 + L1M4 LINE L1 3886 4412 -1734 229 293 9 94 chr2 35946877 35946983 -214740871 + L2 LINE L2 3195 3291 -22 21 0 0 0 chr2 35947112 35947133 -214740721 + AT_rich Low_complexity Low_complexity 1 21 0 234 149 0 45 chr2 35947171 35947238 -214740616 + (TA)n Simple_repeat Simple_repeat 1 64 0 24 32 0 0 chr2 35947829 35947860 -214739994 + AT_rich Low_complexity Low_complexity 1 31 0 429 279 144 14 chr2 35947864 35948079 -214739775 + HAL1b LINE L1 1099 1341 -7 1459 236 44 16 chr2 35948702 35949105 -214738749 - MLT1D LTR MaLR 0 593 90 768 183 53 140 chr2 35949234 35949519 -214738335 - MLT1D-int LTR MaLR 0 1371 1112 24 85 0 0 chr2 35950118 35950177 -214737677 + AT_rich Low_complexity Low_complexity 1 59 0 206 174 22 0 chr2 35951585 35951631 -214736223 + (TA)n Simple_repeat Simple_repeat 1 47 0 2249 192 75 0 chr2 35953454 35953949 -214733905 - L1MA10 LINE L1 -10 6324 5793 226 302 0 0 chr2 35953995 35954058 -214733796 - Charlie2b DNA MER1_type -1476 1306 1244 303 216 24 24 chr2 35954074 35954199 -214733655 + (TA)n Simple_repeat Simple_repeat 1 125 0 234 91 0 0 chr2 35954199 35954232 -214733622 + (GA)n Simple_repeat Simple_repeat 2 34 0 410 339 106 34 chr2 35954255 35954642 -214733212 - Charlie2b DNA MER1_type -2278 584 170 22 56 0 0 chr2 35956206 35956242 -214731612 + AT_rich Low_complexity Low_complexity 1 36 0 348 314 163 13 chr2 35957694 35957847 -214730007 + MER5A DNA MER1_type 14 189 0 2323 56 3 13 chr2 35958084 35958386 -214729468 + AluY SINE Alu 1 299 -12 339 233 25 64 chr2 35958428 35958575 -214729279 - Charlie8 DNA MER1_type -2157 260 140 378 224 93 0 chr2 35958979 35959086 -214728768 - MIR SINE MIR -12 250 134 1589 168 39 95 chr2 35959317 35959727 -214728127 - MER39 LTR ERV1 -2 705 319 1967 269 73 53 chr2 35960334 35961881 -214725973 + L1ME3A LINE L1 748 2278 -4128 232 313 54 54 chr2 35962203 35962427 -214725427 - L2 LINE L2 -8 3305 3082 885 322 93 15 chr2 35962515 35962987 -214724867 - L2 LINE L2 -1193 2121 1613 375 318 53 5 chr2 35963094 35963283 -214724571 - LTR67 LTR ERVL 0 557 360 258 232 192 87 chr2 35963700 35964389 -214723465 + L1ME3A LINE L1 4353 5113 -1293 364 275 114 80 chr2 35964411 35964735 -214723119 + L1ME3A LINE L1 5871 6205 -225 787 248 37 63 chr2 35964831 35965101 -214722753 + MLT2B1 LTR ERVL 5 267 -253 24 0 0 0 chr2 35965200 35965224 -214722630 + AT_rich Low_complexity Low_complexity 1 24 0 4888 203 29 12 chr2 35965226 35967293 -214720561 - L1PA16 LINE L1 -9 6157 4060 2187 268 71 4 chr2 35967292 35968090 -214719764 + L1MDb LINE L1 2659 3510 -2896 * 570 241 15 0 chr2 35969427 35969564 -214718290 - MLT2B1 LTR ERVL 0 520 382 192 200 0 0 chr2 35969641 35969691 -214718163 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 24 53 0 0 chr2 35969845 35969883 -214717971 + AT_rich Low_complexity Low_complexity 1 38 0 27 62 0 0 chr2 35970087 35970135 -214717719 + AT_rich Low_complexity Low_complexity 1 48 0 21 71 0 0 chr2 35970484 35970526 -214717328 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 35971196 35971224 -214716630 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 35971307 35971339 -214716515 + AT_rich Low_complexity Low_complexity 1 32 0 202 200 0 0 chr2 35971726 35971766 -214716088 + (TG)n Simple_repeat Simple_repeat 2 41 0 207 220 0 0 chr2 35973037 35973087 -214714767 + (TA)n Simple_repeat Simple_repeat 2 51 0 29 0 0 0 chr2 35973205 35973234 -214714620 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 35974384 35974413 -214713441 + AT_rich Low_complexity Low_complexity 1 29 0 312 294 40 16 chr2 35974719 35974845 -214713009 - MER94 DNA DNA -1 133 5 512 316 106 5 chr2 35974847 35975065 -214712789 + MIR SINE MIR 18 257 -5 24 53 0 0 chr2 35975383 35975421 -214712433 + AT_rich Low_complexity Low_complexity 1 38 0 26 50 0 0 chr2 35976109 35976149 -214711705 + AT_rich Low_complexity Low_complexity 1 40 0 303 266 128 9 chr2 35976150 35976259 -214711595 + MIR SINE MIR 103 224 -38 25 0 0 0 chr2 35976472 35976497 -214711357 + AT_rich Low_complexity Low_complexity 1 25 0 319 286 0 0 chr2 35977355 35977467 -214710387 + L1MDb LINE L1 3854 3965 -2441 * 495 281 61 37 chr2 35977448 35977694 -214710160 + L1 LINE L1 4996 5247 -1159 1604 172 4 4 chr2 35977694 35977962 -214709892 + AluSq SINE Alu 32 299 -14 619 215 0 14 chr2 35978006 35978150 -214709704 - L1 LINE L1 -2324 3822 3681 * 6161 102 12 8 chr2 35978140 35979039 -214708815 - L1PA13 LINE L1 -1 6162 5260 3352 231 20 3 chr2 35979043 35979689 -214708165 + L1PA13 LINE L1 2 658 -6129 295 138 11 69 chr2 35979789 35979876 -214707978 + (TTATA)n Simple_repeat Simple_repeat 5 86 0 2795 161 17 9 chr2 35980460 35980926 -214706928 - Tigger3b DNA MER2_type -760 471 2 480 301 68 11 chr2 35981113 35981289 -214706565 + MIR SINE MIR 29 214 -48 474 276 101 68 chr2 35981772 35982316 -214705538 - MLT1F1 LTR MaLR -3 564 3 250 308 146 32 chr2 35983317 35983502 -214704352 + MIR SINE MIR 57 262 0 362 363 32 6 chr2 35983713 35983870 -214703984 - L1MEd LINE L1 -5467 652 492 235 274 11 32 chr2 35984416 35984511 -214703343 + HAL1b LINE L1 748 840 -508 1670 305 147 23 chr2 35984939 35985090 -214702764 - L2 LINE L2 -1 3312 3181 1898 146 17 3 chr2 35985090 35985377 -214702477 + AluSx SINE Alu 1 291 -21 1670 305 147 23 chr2 35985377 35986273 -214701581 - L2 LINE L2 -132 3181 2122 244 363 32 45 chr2 35986270 35986427 -214701427 - L2 LINE L2 -2131 1183 1029 * 2732 167 83 80 chr2 35986429 35987498 -214700356 + LTR12 LTR ERV1 31 580 -134 320 259 118 35 chr2 35987498 35987668 -214700186 - L2 LINE L2 -2281 1033 850 301 234 103 115 chr2 35989672 35989924 -214697930 - MER112 DNA MER1_type -11 249 1 1568 90 43 0 chr2 35990437 35990670 -214697184 + MER75B DNA T2_type 1 243 0 277 316 127 33 chr2 35991013 35991225 -214696629 - LTR67 LTR ERVL -2 555 324 355 132 40 0 chr2 35991381 35991457 -214696397 - L1MA7 LINE L1 0 6291 6213 262 347 21 35 chr2 35991464 35991608 -214696246 - LTR67 LTR ERVL -359 198 57 210 350 67 17 chr2 35991664 35991784 -214696070 + L2 LINE L2 2932 3057 -256 189 0 0 0 chr2 35991870 35991891 -214695963 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 479 146 0 11 chr2 35991901 35991990 -214695864 + (TTCC)n Simple_repeat Simple_repeat 3 90 0 509 275 128 9 chr2 35993077 35993295 -214694559 + MIR SINE MIR 19 262 0 2312 122 33 33 chr2 35995667 35996093 -214691761 - L1PB1 LINE L1 -1 6150 5725 208 220 0 85 chr2 35996260 35996319 -214691535 + L2 LINE L2 3250 3303 -10 23 0 0 0 chr2 35996374 35996397 -214691457 + AT_rich Low_complexity Low_complexity 1 23 0 183 180 33 98 chr2 35998373 35998434 -214689420 - L2 LINE L2 -78 3235 3179 571 250 91 17 chr2 35998886 35999062 -214688792 + MER4E LTR ERV1 535 723 -43 290 79 0 0 chr2 35999062 35999100 -214688754 + L1PA10 LINE L1 2095 2132 -4014 610 94 0 0 chr2 35999109 35999194 -214688660 + L1PA10 LINE L1 3478 3562 -2584 7630 138 18 14 chr2 35999204 36000482 -214687372 + L1PA10 LINE L1 3771 5053 -1093 1561 120 4 32 chr2 36000482 36000730 -214687124 + L1PA10 LINE L1 5926 6168 0 22 0 0 0 chr2 36000736 36000758 -214687096 + AT_rich Low_complexity Low_complexity 1 22 0 1634 63 10 0 chr2 36001629 36001836 -214686018 + AluSp SINE Alu 93 301 -12 200 307 27 0 chr2 36001946 36002021 -214685833 - MIR SINE MIR -13 249 173 351 224 122 9 chr2 36002059 36002166 -214685688 + L2 LINE L2 3190 3308 -5 321 47 0 0 chr2 36003722 36003765 -214684089 + (CA)n Simple_repeat Simple_repeat 2 44 0 42874 49 4 1 chr2 36006996 36013140 -214674714 + L1PA4 LINE L1 2 6154 -1 2098 275 41 19 chr2 36013963 36014744 -214673110 - L1ME1 LINE L1 -4 6162 5365 364 259 109 6 chr2 36014751 36014925 -214672929 + L1MB1 LINE L1 3346 3537 -2609 210 37 0 0 chr2 36014945 36014972 -214672882 + (CA)n Simple_repeat Simple_repeat 1 27 0 4955 80 5 1 chr2 36015625 36016287 -214671567 - L1PA6 LINE L1 -3 6151 5488 6743 234 60 9 chr2 36016397 36018504 -214669350 + L1PA13 LINE L1 758 2976 -3821 611 226 171 13 chr2 36018500 36018739 -214669115 - L1 LINE L1 -2446 3700 3424 * 1591 228 75 11 chr2 36018737 36019087 -214668767 + L1MB1 LINE L1 3879 4268 -1878 231 114 0 0 chr2 36019087 36019122 -214668732 + (CA)n Simple_repeat Simple_repeat 2 36 0 1591 228 75 11 chr2 36019122 36019241 -214668613 + L1MB1 LINE L1 4268 4378 -1768 * 3994 181 29 35 chr2 36019231 36020035 -214667819 + L1MB1 LINE L1 5106 5907 -261 2305 101 0 0 chr2 36020035 36020333 -214667521 + AluSq SINE Alu 1 298 -15 3994 181 29 35 chr2 36020333 36020594 -214667260 + L1MB1 LINE L1 5907 6168 0 2153 241 51 69 chr2 36020578 36021512 -214666342 + L1ME1 LINE L1 5146 6047 -119 * 2206 92 7 0 chr2 36021512 36021807 -214666047 + AluY SINE Alu 1 297 -14 2153 241 51 69 chr2 36021807 36021920 -214665934 + L1ME1 LINE L1 6047 6161 -5 183 129 0 0 chr2 36022910 36022941 -214664913 + (TTA)n Simple_repeat Simple_repeat 2 32 0 2313 128 8 16 chr2 36023126 36023493 -214664361 + THE1B LTR MaLR 1 364 0 11342 101 12 1 chr2 36023493 36025055 -214662799 + THE1B-int LTR MaLR 1 1580 0 2233 124 5 42 chr2 36025055 36025433 -214662421 + THE1B LTR MaLR 1 364 0 275 359 41 15 chr2 36025445 36025640 -214662214 + L1MEd LINE L1 460 659 -5460 391 282 126 15 chr2 36025712 36025974 -214661880 + L1MEd LINE L1 893 1183 -4936 346 354 132 0 chr2 36026016 36026259 -214661595 + HAL1 LINE L1 1379 1653 -854 558 207 117 5 chr2 36026391 36026579 -214661275 + L1M4 LINE L1 5129 5337 -809 8136 133 7 2 chr2 36026609 36028646 -214659208 - L1PA8A LINE L1 -1 6445 4407 10824 163 14 29 chr2 36028648 36032001 -214655853 - L1PA8A LINE L1 -3101 3360 1 2487 70 0 6 chr2 36032422 36032735 -214655119 + AluY SINE Alu 1 311 0 804 186 0 111 chr2 36033161 36033360 -214654494 - L1PA16 LINE L1 -17 6149 5973 368 183 0 0 chr2 36033360 36033431 -214654423 + Charlie1 DNA MER1_type 2186 2256 -505 21 36 0 0 chr2 36033668 36033696 -214654158 + AT_rich Low_complexity Low_complexity 1 28 0 289 297 80 9 chr2 36033721 36033768 -214654086 - MIR SINE MIR -19 243 201 1678 142 85 3 chr2 36033768 36034098 -214653756 - MER46B DNA MER2_type -4 232 1 289 297 80 9 chr2 36034098 36034226 -214653628 - MIR SINE MIR -61 201 6 283 203 241 0 chr2 36034470 36034549 -214653305 - MER45 DNA AcHobo -58 120 23 353 200 60 30 chr2 36034958 36035058 -214652796 - L1MC4 LINE L1 -12 8030 7928 216 0 0 0 chr2 36035152 36035176 -214652678 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1956 97 61 21 chr2 36035193 36035472 -214652382 - AluSg SINE Alu -20 290 1 282 288 131 50 chr2 36035673 36035895 -214651959 + MIR SINE MIR 8 247 -15 3485 126 26 0 chr2 36036823 36037361 -214650493 - L1P3 LINE L1 -5323 552 1 1779 125 0 8 chr2 36037784 36038048 -214649806 + AluY SINE Alu 3 264 -47 1813 247 65 66 chr2 36040100 36041226 -214646628 - L1M4c LINE L1 -3998 2565 1296 24 0 0 0 chr2 36041579 36041603 -214646251 + AT_rich Low_complexity Low_complexity 1 24 0 715 237 30 10 chr2 36042631 36042829 -214645025 + MSTA LTR MaLR 227 428 0 1951 261 57 7 chr2 36042845 36043587 -214644267 - L1MEc LINE L1 -2652 3563 2785 700 302 97 36 chr2 36043583 36044080 -214643774 - L1MEc LINE L1 -5531 865 339 * 207 0 0 0 chr2 36044257 36044280 -214643574 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2378 71 3 3 chr2 36044284 36044579 -214643275 - AluY SINE Alu -16 295 1 601 289 93 34 chr2 36044701 36045211 -214642643 + L1ME3A LINE L1 5366 5940 -230 294 254 67 75 chr2 36045527 36045767 -214642087 + L1MEc LINE L1 1393 1630 -4766 1393 191 82 11 chr2 36045787 36046054 -214641800 + L1PA15 LINE L1 4 289 -6498 1332 197 27 7 chr2 36046079 36046373 -214641481 + L1PA15 LINE L1 2192 2491 -4306 15649 32 0 0 chr2 36046373 36049007 -214638847 - L1PA4 LINE L1 0 6155 3521 9464 44 3 0 chr2 36049008 36050210 -214637644 + L1PA4 LINE L1 2303 3508 -2638 * 16504 209 15 8 chr2 36050206 36054219 -214633635 + L1PA15 LINE L1 2476 6514 -302 2236 128 3 3 chr2 36054415 36054766 -214633088 + L1PA13 LINE L1 5794 6144 -19 27 29 0 0 chr2 36054767 36054801 -214633053 + AT_rich Low_complexity Low_complexity 1 34 0 2536 281 66 35 chr2 36054855 36057050 -214630804 + L1MEc LINE L1 1693 4092 -2123 1178 149 13 53 chr2 36057052 36057280 -214630574 + THE1C LTR MaLR 157 375 0 921 201 13 27 chr2 36057390 36057614 -214630240 - L1PB4 LINE L1 -7 6149 5929 310 325 114 23 chr2 36057626 36057810 -214630044 + MIR SINE MIR 16 218 -44 547 113 0 0 chr2 36057810 36057890 -214629964 - MADE1 DNA Mariner 0 80 1 310 325 114 23 chr2 36057890 36057920 -214629934 + MIR SINE MIR 218 244 -18 23 54 0 0 chr2 36058003 36058040 -214629814 + AT_rich Low_complexity Low_complexity 1 37 0 716 142 8 17 chr2 36060358 36060478 -214627376 - THE1C LTR MaLR -1 374 256 478 160 53 114 chr2 36060498 36060629 -214627225 - THE1C LTR MaLR -252 123 1 3731 120 9 2 chr2 36060629 36061170 -214626684 - THE1C-int LTR MaLR 0 1580 1036 5681 133 51 63 chr2 36061557 36062616 -214625238 - THE1C-int LTR MaLR -534 1046 1 662 152 9 0 chr2 36062616 36062721 -214625133 - THE1C LTR MaLR 0 375 270 450 0 0 0 chr2 36063429 36063479 -214624375 + (TA)n Simple_repeat Simple_repeat 1 50 0 1638 178 3 11 chr2 36063569 36063856 -214623998 - AluJo SINE Alu -23 289 5 222 150 0 0 chr2 36064876 36064916 -214622938 + (TC)n Simple_repeat Simple_repeat 2 41 0 234 62 0 0 chr2 36064919 36064951 -214622903 + (CA)n Simple_repeat Simple_repeat 2 33 0 2034 217 85 79 chr2 36066472 36067293 -214620561 + LTR1B LTR ERV1 1 826 0 180 152 0 0 chr2 36067638 36067671 -214620183 + A-rich Low_complexity Low_complexity 1 33 0 2086 133 130 11 chr2 36068016 36068392 -214619462 - MSTA LTR MaLR -7 421 1 1618 239 109 66 chr2 36068970 36069808 -214618046 + L1MC4 LINE L1 7023 7896 -146 363 137 0 0 chr2 36069840 36069913 -214617941 + (TG)n Simple_repeat Simple_repeat 1 73 0 21 36 0 0 chr2 36070018 36070046 -214617808 + AT_rich Low_complexity Low_complexity 1 28 0 1339 229 6 19 chr2 36070122 36070436 -214617418 + AluJb SINE Alu 1 310 -2 1852 133 0 4 chr2 36071331 36071595 -214616259 - AluSc SINE Alu -8 301 39 2021 223 20 17 chr2 36072023 36072607 -214615247 - L1P LINE L1 -2751 3395 2810 278 335 68 11 chr2 36072774 36072965 -214614889 + L2 LINE L2 2430 2631 -683 247 285 31 54 chr2 36073639 36073769 -214614085 - MLT1H LTR MaLR -17 532 406 25 0 0 0 chr2 36074598 36074623 -214613231 + AT_rich Low_complexity Low_complexity 1 25 0 207 85 64 0 chr2 36074843 36074890 -214612964 + (TA)n Simple_repeat Simple_repeat 2 51 0 318 296 23 0 chr2 36074951 36075039 -214612815 - L1MC4 LINE L1 -1339 6703 6614 23 0 0 0 chr2 36075349 36075372 -214612482 + AT_rich Low_complexity Low_complexity 1 23 0 287 398 79 11 chr2 36075372 36075651 -214612203 - L3 LINE CR1 -230 1347 1050 929 272 26 13 chr2 36075749 36076062 -214611792 - L1ME2 LINE L1 -11 6948 6632 998 68 0 0 chr2 36076075 36076207 -214611647 - L1PA8 LINE L1 0 6172 6041 1821 116 0 4 chr2 36076208 36076485 -214611369 + L1P LINE L1 4595 4870 -1276 475 212 36 15 chr2 36076495 36076632 -214611222 - L1ME2 LINE L1 -347 6612 6473 877 271 23 62 chr2 36076767 36077082 -214610772 - L1ME2 LINE L1 -505 6454 6153 230 254 152 35 chr2 36077199 36077396 -214610458 - L1ME2 LINE L1 -991 5950 5731 253 137 0 20 chr2 36077425 36077476 -214610378 - LTR66 LTR ERVL -172 438 389 343 251 86 34 chr2 36077496 36077671 -214610183 - L1ME2 LINE L1 -1219 5722 5539 * 685 291 38 40 chr2 36077665 36078085 -214609769 - L1ME2 LINE L1 -4579 2543 2125 253 259 30 38 chr2 36078109 36078240 -214609614 - L1ME2 LINE L1 -4960 1879 1750 455 293 62 36 chr2 36078405 36078709 -214609145 - L1ME2 LINE L1 -4934 1489 1178 227 333 29 29 chr2 36079237 36079408 -214608446 - L1ME2 LINE L1 -6226 197 27 11133 224 50 32 chr2 36080553 36083708 -214604146 - L1MA6 LINE L1 0 6942 3846 1934 127 31 3 chr2 36083708 36084000 -214603854 - AluSx SINE Alu -12 300 1 11133 224 50 32 chr2 36084000 36086205 -214601649 - L1MA6 LINE L1 -3096 3846 1774 2025 114 35 7 chr2 36086205 36086494 -214601360 + AluSq SINE Alu 3 299 -14 11133 224 50 32 chr2 36086494 36087153 -214600701 - L1MA6 LINE L1 -5168 1774 1129 1533 323 65 40 chr2 36087122 36087862 -214599992 - L1MA6 LINE L1 -6021 768 11 * 331 338 5 28 chr2 36087898 36088111 -214599743 - L1M4 LINE L1 -4865 1677 1470 1250 299 89 20 chr2 36088257 36089284 -214598570 - L1M4 LINE L1 -886 5260 4164 472 257 78 69 chr2 36089349 36089668 -214598186 - L1M4 LINE L1 -2347 3799 3478 399 304 137 60 chr2 36089671 36090224 -214597630 - L1MEc LINE L1 -5060 1336 741 1398 294 66 36 chr2 36092549 36093535 -214594319 + L1MEc LINE L1 400 1414 -4982 912 269 145 30 chr2 36093670 36094537 -214593317 + L1M4 LINE L1 4143 5109 -1037 267 273 20 10 chr2 36095288 36095387 -214592467 + MLT1I LTR MaLR 307 406 -3 419 359 137 0 chr2 36095507 36095850 -214592004 + L1M4 LINE L1 3724 4113 -2033 204 333 0 0 chr2 36096309 36096360 -214591494 + polypyrimidine Low_complexity Low_complexity 4 54 0 186 188 14 29 chr2 36097088 36097157 -214590697 + (TA)n Simple_repeat Simple_repeat 2 69 0 248 318 64 0 chr2 36097320 36097430 -214590424 + MER58A DNA MER1_type 1 0 -107 1214 211 79 16 chr2 36099271 36099733 -214588121 - Tigger7 DNA MER2_type 0 2587 25 348 211 21 0 chr2 36099963 36100058 -214587796 - L1MB7 LINE L1 -1 6183 6087 237 86 0 0 chr2 36100070 36100105 -214587749 - MLT2B3 LTR ERVL -6 509 475 539 112 0 35 chr2 36100105 36100221 -214587633 + (GGAA)n Simple_repeat Simple_repeat 3 114 0 1818 185 34 50 chr2 36100222 36100605 -214587249 - MLT2B3 LTR ERVL -173 381 5 704 215 22 53 chr2 36100612 36100840 -214587014 - L1MB8 LINE L1 -100 6078 5858 6017 212 121 26 chr2 36100863 36102401 -214585453 - MER52A LTR ERV1 0 1755 1 1973 139 29 42 chr2 36102467 36102847 -214585007 - THE1C LTR MaLR 0 375 1 360 313 43 0 chr2 36102965 36103080 -214584774 + HERVL LTR ERVL 4790 4909 -745 394 282 27 75 chr2 36103107 36103295 -214584559 + MLT2E LTR ERVL 202 380 -248 21 71 0 0 chr2 36104144 36104186 -214583668 + AT_rich Low_complexity Low_complexity 1 42 0 356 266 133 26 chr2 36104658 36104891 -214582963 - MER5C DNA MER1_type -49 275 18 38 39 0 0 chr2 36104970 36105022 -214582832 + AT_rich Low_complexity Low_complexity 1 52 0 1349 233 0 7 chr2 36105041 36105320 -214582534 - AluJo SINE Alu -35 277 1 335 316 93 60 chr2 36105353 36105739 -214582115 - L1ME3A LINE L1 -36 6203 5805 1472 286 109 21 chr2 36105798 36106365 -214581489 - MLT1E2 LTR MaLR -7 619 3 237 304 13 0 chr2 36106370 36106449 -214581405 - L1ME3A LINE L1 -558 5681 5602 1692 175 52 30 chr2 36106449 36106814 -214581040 + THE1C LTR MaLR 1 373 -2 6489 140 232 19 chr2 36106820 36108119 -214579735 + THE1C-int LTR MaLR 5 1580 0 1596 194 67 28 chr2 36108119 36108480 -214579374 + THE1C LTR MaLR 1 375 0 324 303 33 0 chr2 36108541 36108663 -214579191 - L1ME3A LINE L1 -687 5544 5419 681 273 143 52 chr2 36108690 36109291 -214578563 - L1ME3A LINE L1 -1174 5041 4386 25 0 0 0 chr2 36109497 36109522 -214578332 + AT_rich Low_complexity Low_complexity 1 25 0 1805 280 73 25 chr2 36109543 36110910 -214576944 - L1MEc LINE L1 -2695 3520 2118 304 264 0 11 chr2 36110925 36111012 -214576842 - L1MEc LINE L1 -6266 130 45 26 30 0 0 chr2 36111652 36111685 -214576169 + AT_rich Low_complexity Low_complexity 1 33 0 287 229 0 60 chr2 36112259 36112342 -214575512 - L2 LINE L2 -9 3304 3227 789 254 80 57 chr2 36113692 36114145 -214573709 + MLT1C LTR MaLR 1 463 -4 435 298 36 60 chr2 36114264 36114512 -214573342 + HAL1 LINE L1 810 1051 -1456 2644 196 26 16 chr2 36114517 36115094 -214572760 + L1MA7 LINE L1 5577 6159 -132 330 285 136 58 chr2 36115366 36115868 -214571986 + HAL1 LINE L1 1398 1938 -569 2045 259 101 40 chr2 36116051 36118058 -214569796 - L1MD1 LINE L1 -9 6233 4084 322 259 65 50 chr2 36118058 36118197 -214569657 - L1MD1 LINE L1 -3765 2381 2241 688 279 40 7 chr2 36118197 36118473 -214569381 - L1M4 LINE L1 -2073 4775 4491 408 20 0 0 chr2 36118476 36118525 -214569329 + (CA)n Simple_repeat Simple_repeat 2 50 0 231 103 0 0 chr2 36118527 36118566 -214569288 + (GA)n Simple_repeat Simple_repeat 1 39 0 5715 240 25 34 chr2 36118597 36119115 -214568739 - L1M4 LINE L1 -3906 2942 2421 2257 101 0 0 chr2 36119115 36119411 -214568443 + AluY SINE Alu 1 296 -15 5715 240 25 34 chr2 36119411 36120660 -214567194 - L1M4 LINE L1 -4427 2421 1192 445 163 20 14 chr2 36120672 36120819 -214567035 + (TA)n Simple_repeat Simple_repeat 1 148 0 5764 237 62 3 chr2 36120824 36122521 -214565333 + L1 LINE L1 2330 4125 -2021 10972 210 32 54 chr2 36122526 36122975 -214564879 - L1 LINE L1 -1144 5002 4545 1905 137 7 0 chr2 36122975 36123253 -214564601 - AluSx SINE Alu -32 280 1 10972 210 32 54 chr2 36123253 36123267 -214564587 - L1 LINE L1 -1601 4545 4532 744 11 0 0 chr2 36123267 36123356 -214564498 - AluY SINE Alu -10 301 213 10972 210 32 54 chr2 36123356 36126205 -214561649 - L1 LINE L1 -1614 4532 1664 3463 153 15 5 chr2 36126208 36126987 -214560867 + L1PB1 LINE L1 5010 5791 -360 361 110 86 0 chr2 36126987 36127150 -214560704 + (TA)n Simple_repeat Simple_repeat 1 177 0 2411 123 6 6 chr2 36127150 36127515 -214560339 + L1PB1 LINE L1 5781 6145 -6 3824 219 34 7 chr2 36127558 36128504 -214559350 + L1 LINE L1 4114 5084 -1062 587 214 8 0 chr2 36128528 36128645 -214559209 - MSTB1 LTR MaLR 0 432 315 22 56 0 0 chr2 36129503 36129539 -214558315 + AT_rich Low_complexity Low_complexity 1 36 0 187 273 0 0 chr2 36130162 36130206 -214557648 + MIR SINE MIR 101 144 -64 1007 175 0 6 chr2 36130893 36131059 -214556795 - AluJb SINE Alu -21 291 127 235 91 0 0 chr2 36131059 36131092 -214556762 + Alu SINE Alu 65 97 -205 2027 125 7 10 chr2 36131441 36131738 -214556116 + AluSx SINE Alu 1 296 -16 216 0 0 0 chr2 36132176 36132200 -214555654 + (TG)n Simple_repeat Simple_repeat 2 25 0 3042 253 72 25 chr2 36132251 36133875 -214553979 + L1MDa LINE L1 18 1936 -4604 14706 212 32 42 chr2 36133897 36139357 -214548497 + L1PA16 LINE L1 1 5336 -1533 1332 77 25 20 chr2 36139357 36139553 -214548301 - L1PA14 LINE L1 -5 6156 5960 14706 212 32 42 chr2 36139553 36140807 -214547047 + L1PA16 LINE L1 5336 6602 -267 325 285 96 0 chr2 36140829 36141001 -214546853 - L1MC/D LINE L1 -600 5562 5485 1403 138 12 16 chr2 36141024 36141271 -214546583 + L1PA16 LINE L1 5920 6165 -1 828 161 52 16 chr2 36141272 36141464 -214546390 + L1MDa LINE L1 1953 2151 -4389 633 259 68 36 chr2 36141447 36141698 -214546156 + L1ME1 LINE L1 4519 4777 -1369 * 704 262 169 22 chr2 36141850 36142374 -214545480 + L1ME1 LINE L1 5297 6075 -91 26 30 0 0 chr2 36142631 36142664 -214545190 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr2 36145580 36145604 -214542250 + AT_rich Low_complexity Low_complexity 1 24 0 367 326 124 5 chr2 36145878 36146096 -214541758 + LTR33A LTR ERVL 5 248 -275 2143 134 27 24 chr2 36146203 36146577 -214541277 - THE1C LTR MaLR 0 375 1 1126 221 38 4 chr2 36146883 36147150 -214540704 - L1MB8 LINE L1 -297 5881 5606 264 352 29 29 chr2 36147312 36147536 -214540318 + ERVL LTR ERVL 2949 3172 -2482 268 315 141 7 chr2 36147733 36147882 -214539972 + ERVL LTR ERVL 3321 3489 -2275 301 301 49 115 chr2 36149518 36149744 -214538110 + L1MD2 LINE L1 785 995 -5545 1151 238 52 13 chr2 36149857 36150240 -214537614 + L1MD2 LINE L1 979 1376 -5167 1061 260 47 51 chr2 36150233 36150511 -214537343 + L1MD2 LINE L1 4768 5046 -1707 * 2235 94 0 0 chr2 36150511 36150846 -214537008 + AluY SINE Alu 2 336 0 1061 260 47 51 chr2 36150846 36152324 -214535530 + L1MD2 LINE L1 5046 6731 -22 28 48 0 0 chr2 36152785 36152827 -214535027 + AT_rich Low_complexity Low_complexity 1 42 0 1533 292 51 19 chr2 36152909 36153548 -214534306 + L2 LINE L2 2439 3095 -218 294 215 41 8 chr2 36154090 36154211 -214533643 + (CATATA)n Simple_repeat Simple_repeat 2 126 0 5031 57 28 0 chr2 36154351 36155004 -214532850 + L1PA7 LINE L1 5484 6154 0 27 0 0 0 chr2 36155227 36155254 -214532600 + AT_rich Low_complexity Low_complexity 1 27 0 328 299 93 41 chr2 36155352 36155696 -214532158 + L1ME4a LINE L1 5563 5924 -197 7121 163 29 17 chr2 36156035 36158303 -214529551 + L1MA8 LINE L1 3997 6287 -4 206 355 65 39 chr2 36158934 36159089 -214528765 + MIR SINE MIR 81 239 -23 342 0 0 0 chr2 36159862 36159900 -214527954 + (CA)n Simple_repeat Simple_repeat 2 39 0 847 123 0 0 chr2 36160363 36160493 -214527361 - L1P5 LINE L1 -685 5466 5337 3914 110 3 2 chr2 36160493 36161064 -214526790 + L1PB1 LINE L1 5576 6148 -3 319 210 60 20 chr2 36161461 36161561 -214526293 - L1ME4a LINE L1 -249 5872 5769 24 32 0 0 chr2 36161795 36161826 -214526028 + AT_rich Low_complexity Low_complexity 1 31 0 278 182 13 52 chr2 36161826 36161903 -214525951 - L1M2 LINE L1 -856 5441 5368 1918 179 28 3 chr2 36161915 36162267 -214525587 - MLT1A1 LTR MaLR 0 365 5 33 43 0 0 chr2 36162585 36162632 -214525222 + AT_rich Low_complexity Low_complexity 1 47 0 396 226 80 36 chr2 36162758 36162895 -214524959 - MER103 DNA DNA -10 156 14 197 328 8 118 chr2 36163027 36163146 -214524708 + MIR SINE MIR 49 154 -108 25 0 0 0 chr2 36163222 36163247 -214524607 + AT_rich Low_complexity Low_complexity 1 25 0 24 67 0 0 chr2 36163462 36163507 -214524347 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr2 36165253 36165274 -214522580 + AT_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr2 36165340 36165397 -214522457 + AT_rich Low_complexity Low_complexity 1 57 0 1058 50 7 0 chr2 36165756 36165895 -214521959 - L1P LINE L1 -3781 2365 2226 1504 91 5 0 chr2 36166418 36166626 -214521228 - L1PA11 LINE L1 0 6174 5966 253 306 0 59 chr2 36167016 36167135 -214520719 - MIR SINE MIR -70 138 45 182 319 127 66 chr2 36169524 36169737 -214518117 + L2 LINE L2 2256 2481 -833 321 296 73 95 chr2 36169887 36170353 -214517501 + L1ME4a LINE L1 5316 5764 -357 2306 86 0 0 chr2 36170353 36170643 -214517211 + AluY SINE Alu 1 290 -21 321 296 73 95 chr2 36170643 36170849 -214517005 + L1ME4a LINE L1 5764 5973 -148 337 319 70 13 chr2 36172136 36172293 -214515561 - MIR SINE MIR -44 218 53 2091 252 51 46 chr2 36172514 36173281 -214514573 + L1MD1 LINE L1 5452 6222 -20 2386 86 0 0 chr2 36173289 36173590 -214514264 - AluY SINE Alu -10 301 1 208 135 0 0 chr2 36173771 36173808 -214514046 + (A)n Simple_repeat Simple_repeat 1 37 0 31413 40 1 1 chr2 36173973 36180122 -214507732 - L1PA3 LINE L1 -11 6144 3 6267 220 53 10 chr2 36180133 36181866 -214505988 + L1 LINE L1 2906 4713 -1433 19037 172 39 14 chr2 36181868 36185587 -214502267 + L1M1 LINE L1 17 3832 -3733 5423 199 30 52 chr2 36185582 36186278 -214501576 + L1M1 LINE L1 4401 5110 -2455 * 213 39 0 0 chr2 36186278 36186304 -214501550 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5423 199 30 52 chr2 36186304 36186507 -214501347 + L1M1 LINE L1 5110 5316 -2249 1782 130 10 81 chr2 36186507 36186815 -214501039 + AluSx SINE Alu 1 286 -26 5423 199 30 52 chr2 36186815 36187429 -214500425 + L1M1 LINE L1 5316 5883 -1682 2148 196 45 16 chr2 36187421 36188275 -214499579 + L1M1 LINE L1 6249 7121 -598 * 498 115 26 0 chr2 36188404 36188482 -214499372 - MADE1 DNA Mariner 0 80 1 195 219 0 0 chr2 36188546 36188587 -214499267 + L3 LINE CR1 1523 1563 -14 * 237 349 0 38 chr2 36188582 36188688 -214499166 - MIR3 SINE MIR -96 112 11 313 256 117 7 chr2 36189131 36189268 -214498586 - MER103 DNA DNA -13 153 2 335 377 15 0 chr2 36189630 36189760 -214498094 + L2 LINE L2 3141 3272 0 22 25 0 25 chr2 36191288 36191309 -214496545 + AT_rich Low_complexity Low_complexity 1 22 -17 772 282 10 10 chr2 36191309 36191610 -214496244 - AluY SINE Alu 0 301 1 22 25 0 25 chr2 36191610 36191628 -214496226 + AT_rich Low_complexity Low_complexity 22 39 0 5454 218 2 0 chr2 36192175 36193326 -214494528 - L1P LINE L1 -943 5203 4051 2363 190 73 2 chr2 36193327 36193833 -214494021 - L1MA9 LINE L1 -139 6173 5632 780 278 65 51 chr2 36193886 36194318 -214493536 - L1MD2 LINE L1 -3 6356 5919 2214 190 39 2 chr2 36194402 36194813 -214493041 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr2 36194947 36194968 -214492886 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 36195113 36195141 -214492713 + AT_rich Low_complexity Low_complexity 1 28 0 2676 106 0 0 chr2 36195836 36196195 -214491659 + THE1B LTR MaLR 1 359 -5 2793 216 60 20 chr2 36196195 36197339 -214490515 - L1MD2 LINE L1 -743 5403 4411 2490 64 0 0 chr2 36197339 36197635 -214490219 - AluY SINE Alu -15 296 1 2793 216 60 20 chr2 36197635 36197699 -214490155 - L1MD2 LINE L1 -1735 4411 4351 539 311 0 12 chr2 36197710 36197871 -214489983 - MLT1C LTR MaLR 0 467 309 1860 277 26 9 chr2 36197887 36198580 -214489274 - L1MD2 LINE L1 -2771 3375 2671 1217 143 18 6 chr2 36198594 36198856 -214488998 + Tigger4(Zombi) DNA MER2_type 1 2647 -84 820 221 23 0 chr2 36199170 36199342 -214488512 + MER58A DNA MER1_type 47 222 -2 189 271 29 29 chr2 36199355 36199425 -214488429 - L2 LINE L2 -665 2649 2580 2079 170 44 34 chr2 36199611 36200158 -214487696 - MLT2A2 LTR ERVL 0 554 1 36 82 0 0 chr2 36200588 36200673 -214487181 + AT_rich Low_complexity Low_complexity 1 85 0 41 0 0 0 chr2 36200740 36200781 -214487073 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 36200845 36200867 -214486987 + AT_rich Low_complexity Low_complexity 1 22 0 389 305 108 14 chr2 36201058 36201281 -214486573 + MIR SINE MIR 5 248 -14 368 279 16 0 chr2 36201605 36201734 -214486120 + MER94 DNA DNA 4 134 0 326 257 29 0 chr2 36202329 36202399 -214485455 - L2 LINE L2 -3 3269 3198 1516 219 53 29 chr2 36202978 36203434 -214484420 - MLT1C LTR MaLR 0 467 1 242 0 0 0 chr2 36204117 36204144 -214483710 - L1P LINE L1 -5540 606 580 228 209 0 0 chr2 36205288 36205331 -214482523 - L1MC/D LINE L1 -605 5728 5686 547 233 114 11 chr2 36205379 36205555 -214482299 - L1ME LINE L1 -379 5791 5598 2604 256 57 50 chr2 36206417 36207840 -214480014 - L1ME LINE L1 -2266 3880 2448 391 206 160 15 chr2 36207840 36207971 -214479883 + MER74C LTR ERVL 2 151 -309 307 222 14 0 chr2 36208083 36208155 -214479699 + THE1-int LTR MaLR 495 567 -1013 516 161 0 89 chr2 36211252 36211376 -214476478 + L1PA16 LINE L1 6051 6163 -3 24 53 0 0 chr2 36211501 36211539 -214476315 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 36211952 36211982 -214475872 + AT_rich Low_complexity Low_complexity 1 30 0 10942 222 25 18 chr2 36212738 36219208 -214468646 - L1PBa LINE L1 -1227 5635 3 1371 146 218 32 chr2 36219228 36219536 -214468318 - L1PA8A LINE L1 -354 5777 5413 279 328 63 58 chr2 36219951 36220125 -214467729 - MER5B DNA MER1_type -3 175 1 1824 134 29 4 chr2 36220898 36221173 -214466681 + AluSx SINE Alu 1 282 -30 22 0 0 0 chr2 36221182 36221204 -214466650 + AT_rich Low_complexity Low_complexity 1 22 0 6898 42 4 0 chr2 36221334 36222171 -214465683 + L1PA5 LINE L1 5313 6152 -2 23 0 0 0 chr2 36222446 36222469 -214465385 + AT_rich Low_complexity Low_complexity 1 23 0 1339 221 85 12 chr2 36222742 36223073 -214464781 - MER4D LTR ERV1 0 903 549 1656 190 17 0 chr2 36223108 36223397 -214464457 - MER49 LTR ERV1 -629 294 1 290 113 0 19 chr2 36223833 36223886 -214463968 + (GGAA)n Simple_repeat Simple_repeat 4 55 0 180 400 38 0 chr2 36224928 36225033 -214462821 + MIR SINE MIR 52 160 -102 626 241 123 21 chr2 36225288 36225475 -214462379 - MIR SINE MIR -25 237 32 2117 189 31 24 chr2 36227837 36228260 -214459594 + MSTB LTR MaLR 1 426 0 22 56 0 0 chr2 36228596 36228632 -214459222 + AT_rich Low_complexity Low_complexity 1 36 0 234 0 0 0 chr2 36228775 36228801 -214459053 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 270 0 0 0 chr2 36228800 36228830 -214459024 + (CA)n Simple_repeat Simple_repeat 1 30 0 944 355 56 24 chr2 36228840 36229375 -214458479 + L3 LINE CR1 728 1279 -298 279 319 131 11 chr2 36229683 36229943 -214457911 + L1MC/D LINE L1 5258 5548 -2237 26 30 0 0 chr2 36230727 36230760 -214457094 + AT_rich Low_complexity Low_complexity 1 33 0 31 26 0 0 chr2 36230787 36230825 -214457029 + AT_rich Low_complexity Low_complexity 1 38 0 347 213 16 10 chr2 36231965 36231977 -214455877 + MER74A LTR ERVL 267 277 -345 2029 95 49 0 chr2 36231977 36232261 -214455593 - AluY SINE Alu -13 298 1 347 213 16 10 chr2 36232261 36232347 -214455507 + MER74A LTR ERVL 277 426 -196 1085 255 117 57 chr2 36232468 36233679 -214454175 - L1MEc LINE L1 -3685 2879 1656 423 343 40 28 chr2 36233680 36234004 -214453850 - L1MEc LINE L1 -5144 901 574 683 300 84 37 chr2 36234551 36234848 -214453006 - L2 LINE L2 -2 3311 3001 188 375 135 0 chr2 36235344 36235440 -214452414 + L2 LINE L2 3156 3264 -8 243 0 0 0 chr2 36235595 36235622 -214452232 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 5104 30 0 0 chr2 36235623 36236225 -214451629 - L1PA3 LINE L1 0 6155 5554 2462 19 1 0 chr2 36236228 36236628 -214451226 + L1PA3 LINE L1 5155 5555 -600 421 249 154 30 chr2 36238414 36238583 -214449271 + MIR SINE MIR 72 261 -1 258 32 0 0 chr2 36238666 36238697 -214449157 + (CA)n Simple_repeat Simple_repeat 2 32 0 804 187 42 8 chr2 36239836 36240022 -214447832 + MER61D LTR ERV1 259 434 0 25 0 0 0 chr2 36240620 36240645 -214447209 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36240897 36240922 -214446932 + AT_rich Low_complexity Low_complexity 1 25 0 1077 217 57 102 chr2 36241142 36241892 -214445962 - LTR8A LTR ERV1 -34 693 1 313 303 45 11 chr2 36243551 36243640 -214444214 + L2 LINE L2 3169 3260 -12 464 139 13 0 chr2 36244922 36245001 -214442853 + MADE1 DNA Mariner 1 80 0 243 225 14 28 chr2 36245342 36245413 -214442441 + CT-rich Low_complexity Low_complexity 2 71 0 204 362 65 43 chr2 36245975 36246207 -214441647 + L2 LINE L2 2182 2418 -896 186 43 0 0 chr2 36246218 36246241 -214441613 + (T)n Simple_repeat Simple_repeat 1 23 0 4635 128 4 15 chr2 36246439 36247191 -214440663 + L1PA13 LINE L1 5417 6160 -3 517 183 0 9 chr2 36247194 36247307 -214440547 + L1MA4 LINE L1 6068 6170 -121 252 164 0 0 chr2 36247291 36247346 -214440508 + L1MA4A LINE L1 6244 6298 -5 * 197 253 189 21 chr2 36247608 36247703 -214440151 - MIR SINE MIR -150 112 2 270 367 36 0 chr2 36248462 36248601 -214439253 + MIR SINE MIR 63 206 -56 616 237 35 40 chr2 36249000 36249173 -214438681 - MER20 DNA MER1_type -5 214 43 295 89 36 0 chr2 36249892 36249948 -214437906 + CT-rich Low_complexity Low_complexity 2 59 0 590 333 59 26 chr2 36250042 36250312 -214437542 + L3 LINE CR1 788 1066 -511 338 327 14 23 chr2 36250969 36251183 -214436671 - L1M4 LINE L1 -3358 2788 2577 2082 176 59 5 chr2 36251602 36252006 -214435848 + MSTB LTR MaLR 1 426 0 285 109 0 0 chr2 36252349 36252395 -214435459 + (CA)n Simple_repeat Simple_repeat 2 47 0 480 312 62 10 chr2 36252673 36252981 -214434873 + L1MCc LINE L1 1165 1488 -4935 28208 35 2 1 chr2 36354402 36358783 -214329071 - L1PA4 LINE L1 -21 6134 1749 2009 117 0 4 chr2 36358892 36359200 -214328654 + AluSg SINE Alu 1 307 0 1830 128 16 10 chr2 36359202 36359506 -214328348 - MER61C LTR ERV1 -128 306 1 18089 115 29 16 chr2 36359506 36362487 -214325367 - MER61C-int LTR ERV1 0 5217 2201 709 158 104 0 chr2 36362467 36362631 -214325223 - MER61C-int LTR ERV1 -3338 4199 4019 * 2798 174 66 90 chr2 36362598 36363126 -214324728 - MER61C-int LTR ERV1 -3577 2006 1467 2291 99 3 0 chr2 36363126 36363430 -214324424 + AluY SINE Alu 1 305 -6 2798 174 66 90 chr2 36363430 36363603 -214324251 - MER61C-int LTR ERV1 -4116 1467 1291 2463 86 0 0 chr2 36363603 36363907 -214323947 + AluY SINE Alu 1 304 -7 2798 174 66 90 chr2 36363907 36364524 -214323330 - MER61C-int LTR ERV1 -4292 1291 407 1007 166 6 131 chr2 36364536 36364849 -214323005 - MER61C-int LTR ERV1 -4763 454 181 575 183 0 160 chr2 36364895 36365114 -214322740 - MER61C-int LTR ERV1 -5032 185 2 2584 128 53 5 chr2 36365114 36365528 -214322326 - MER61C LTR ERV1 0 434 1 2959 175 9 22 chr2 36365528 36366169 -214321685 - L1MA3 LINE L1 -220 7504 6872 9297 182 46 15 chr2 36366451 36370527 -214317327 - L1MA3 LINE L1 -1516 6049 1852 1661 131 158 75 chr2 36370527 36370900 -214316954 - MER4A LTR ERV1 0 664 261 516 172 0 10 chr2 36370900 36370999 -214316855 - MER4A LTR ERV1 -566 98 1 4701 231 49 10 chr2 36370999 36371776 -214316078 - L1MA3 LINE L1 -5710 1855 1109 2101 180 28 51 chr2 36371776 36372248 -214315606 - LOR1b LTR ERV1 0 461 1 4701 231 49 10 chr2 36372248 36372915 -214314939 - L1MA3 LINE L1 -6456 1109 15 5566 30 3 0 chr2 36373468 36374679 -214313175 - L1PA4 LINE L1 -211 5944 4732 2533 33 0 0 chr2 36374679 36374976 -214312878 + L1PA4 LINE L1 5852 6152 -3 23 33 0 0 chr2 36374976 36375006 -214312848 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 36375040 36375061 -214312793 + AT_rich Low_complexity Low_complexity 1 21 0 1172 224 92 11 chr2 36375289 36375444 -214312410 + L1MB7 LINE L1 5652 5793 -391 2130 100 7 0 chr2 36375444 36375723 -214312131 - AluY SINE Alu -16 295 15 1172 224 92 11 chr2 36375723 36375947 -214311907 + L1MB7 LINE L1 5793 6062 -122 269 172 16 0 chr2 36376048 36376112 -214311742 + (TA)n Simple_repeat Simple_repeat 1 65 0 201 39 0 0 chr2 36376120 36376146 -214311708 + (CA)n Simple_repeat Simple_repeat 1 26 0 201 355 30 41 chr2 36376671 36376840 -214311014 - MER5A DNA MER1_type -22 167 1 2211 107 0 10 chr2 36377588 36377887 -214309967 + AluSc SINE Alu 1 296 -13 282 343 0 0 chr2 36377944 36378043 -214309811 + (TATATG)n Simple_repeat Simple_repeat 3 101 0 1521 244 38 34 chr2 36378781 36379278 -214308576 + MLT1D LTR MaLR 1 499 -6 226 329 0 0 chr2 36379708 36379781 -214308073 + L2 LINE L2 3199 3271 -1 24 32 0 0 chr2 36380225 36380256 -214307598 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 36381362 36381390 -214306464 + AT_rich Low_complexity Low_complexity 1 28 0 1141 290 34 3 chr2 36381517 36381810 -214306044 + MER45B DNA AcHobo 4 305 -735 1827 169 0 31 chr2 36382641 36382960 -214304894 - AluJb SINE Alu -3 309 1 23 54 0 0 chr2 36382974 36383011 -214304843 + AT_rich Low_complexity Low_complexity 1 37 0 851 67 8 0 chr2 36383197 36383316 -214304538 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 270 129 290 0 chr2 36383748 36383810 -214304044 - MADE1 DNA Mariner 0 80 1 4315 208 49 22 chr2 36383812 36384530 -214303324 + L1MA7 LINE L1 5041 5803 -488 1203 210 83 28 chr2 36384530 36384854 -214303000 - MER2 DNA MER2_type -1 343 2 4315 208 49 22 chr2 36384854 36385345 -214302509 + L1MA7 LINE L1 5803 6279 -12 1777 296 86 37 chr2 36388251 36389249 -214298605 - L2 LINE L2 -25 3288 2232 508 285 154 14 chr2 36389256 36389477 -214298377 - L2 LINE L2 -1704 1610 1359 21 36 0 0 chr2 36389771 36389799 -214298055 + AT_rich Low_complexity Low_complexity 1 28 0 784 307 56 0 chr2 36392572 36392803 -214295051 - L2 LINE L2 -1956 1358 1115 21 82 0 0 chr2 36392844 36392893 -214294961 + AT_rich Low_complexity Low_complexity 1 49 0 1640 173 60 33 chr2 36393239 36393604 -214294250 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr2 36393835 36393868 -214293986 + AT_rich Low_complexity Low_complexity 1 33 0 469 218 11 22 chr2 36395116 36395295 -214292559 + CT-rich Low_complexity Low_complexity 2 178 0 610 316 89 31 chr2 36395751 36396232 -214291622 - L1M4 LINE L1 -1146 5236 4728 1145 203 50 10 chr2 36396347 36396647 -214291207 - MER33 DNA MER1_type -8 316 5 3233 190 21 24 chr2 36396811 36397241 -214290613 + LTR58 LTR ERV1 2 431 -248 1874 144 149 8 chr2 36397241 36397616 -214290238 - MSTA LTR MaLR 0 428 1 3233 190 21 24 chr2 36397616 36397863 -214289991 + LTR58 LTR ERV1 431 677 -2 348 341 29 22 chr2 36397880 36398153 -214289701 - L1MDa LINE L1 -3443 2939 2665 1870 143 4 4 chr2 36398169 36398449 -214289405 - AluSx SINE Alu -32 280 1 26 0 0 0 chr2 36398469 36398495 -214289359 + AT_rich Low_complexity Low_complexity 1 26 0 541 347 89 0 chr2 36398504 36398729 -214289125 + MIR SINE MIR 18 262 0 413 316 37 38 chr2 36398813 36399107 -214288747 - L1MDa LINE L1 -3739 2647 2381 378 263 55 67 chr2 36399105 36399335 -214288519 - L1MDa LINE L1 -4663 1719 1436 * 1701 158 76 20 chr2 36399490 36399844 -214288010 + THE1C LTR MaLR 1 374 -1 5211 201 42 74 chr2 36399845 36401622 -214286232 + THE1C-int LTR MaLR 1 1580 0 1903 118 76 25 chr2 36401622 36401979 -214285875 + THE1C LTR MaLR 1 375 0 32 86 0 0 chr2 36402404 36402485 -214285369 + AT_rich Low_complexity Low_complexity 1 81 0 23 33 0 0 chr2 36402821 36402851 -214285003 + AT_rich Low_complexity Low_complexity 1 30 0 620 233 32 42 chr2 36402995 36403278 -214284576 - L1MC5 LINE L1 -35 7926 7647 190 258 76 0 chr2 36403286 36403352 -214284502 + MIR SINE MIR 105 175 -87 23 33 0 0 chr2 36403476 36403506 -214284348 + AT_rich Low_complexity Low_complexity 1 30 0 1132 166 47 32 chr2 36403841 36404094 -214283760 - Tigger2 DNA MER2_type -10 2708 2452 3829 141 9 20 chr2 36404185 36404831 -214283023 - Tigger2 DNA MER2_type -1974 744 106 13563 63 7 2 chr2 36404965 36406701 -214281153 - L1P LINE L1 -4401 1745 1 738 155 0 0 chr2 36406701 36406817 -214281037 - Tigger2 DNA MER2_type -2602 116 1 604 144 19 0 chr2 36406817 36406921 -214280933 - L1MA5 LINE L1 -23 6979 6874 776 158 24 0 chr2 36406922 36407049 -214280805 + FLAM_C SINE Alu 1 130 -13 12223 216 62 31 chr2 36407053 36413702 -214274152 - L1MA5 LINE L1 -126 6876 11 2019 131 3 0 chr2 36413792 36414082 -214273772 - AluSx SINE Alu -2 310 20 203 211 19 0 chr2 36414201 36414253 -214273601 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 304 258 0 43 chr2 36414490 36414583 -214273271 - L1MC4 LINE L1 -1340 6702 6614 943 230 16 0 chr2 36416770 36416957 -214270897 - LTR16A LTR ERVL -9 441 252 2768 172 14 8 chr2 36417084 36417578 -214270276 - LOR1a LTR ERV1 0 497 1 278 383 51 16 chr2 36417736 36417989 -214269865 + L2 LINE L2 2435 2696 -618 2135 121 7 0 chr2 36418125 36418414 -214269440 - AluSx SINE Alu -19 293 3 25 51 0 0 chr2 36418830 36418869 -214268985 + AT_rich Low_complexity Low_complexity 1 39 0 248 263 13 0 chr2 36418995 36419071 -214268783 - L1ME4a LINE L1 -82 6039 5963 262 310 69 7 chr2 36419204 36419349 -214268505 - L1ME4a LINE L1 -262 5859 5706 250 213 45 45 chr2 36419625 36419780 -214268074 + (TATAA)n Simple_repeat Simple_repeat 4 158 0 587 284 71 43 chr2 36420361 36420615 -214267239 - MIR SINE MIR 0 262 2 26 30 0 0 chr2 36421316 36421349 -214266505 + AT_rich Low_complexity Low_complexity 1 33 0 7056 143 15 21 chr2 36421435 36421469 -214266385 - MER66-int LTR ERV1 0 6676 6643 1817 179 0 7 chr2 36421469 36421770 -214266084 - AluSx SINE Alu -13 299 1 7056 143 15 21 chr2 36421770 36422196 -214265658 - MER66-int LTR ERV1 -33 6643 6216 1981 125 0 76 chr2 36422196 36422524 -214265330 - AluSx SINE Alu -9 303 1 7056 143 15 21 chr2 36422524 36423182 -214264672 - MER66-int LTR ERV1 -460 6216 5564 9922 185 21 51 chr2 36423223 36425361 -214262493 - MER66-int LTR ERV1 -2268 4408 2336 2538 189 31 9 chr2 36425349 36426083 -214261771 - MER66-int LTR ERV1 -4507 2169 1384 * 36 40 0 0 chr2 36426826 36426876 -214260978 + AT_rich Low_complexity Low_complexity 1 50 0 961 211 67 21 chr2 36428879 36429025 -214258829 + MER33 DNA MER1_type 5 143 -2442 2783 3 0 3 chr2 36429025 36429328 -214258526 + AluYa5 SINE Alu 1 302 -9 961 211 67 21 chr2 36429328 36429466 -214258388 + MER33 DNA MER1_type 143 302 -22 255 267 78 52 chr2 36429506 36429622 -214258232 + L2 LINE L2 3193 3311 -2 3727 196 31 40 chr2 36430555 36431480 -214256374 + L1MC3 LINE L1 6860 7776 -9 734 185 8 8 chr2 36431480 36431634 -214256220 - AluJb SINE Alu 0 306 153 831 113 24 0 chr2 36431665 36431810 -214256044 - FLAM_C SINE Alu 0 164 17 2499 147 94 2 chr2 36432888 36433343 -214254511 - LOR1a LTR ERV1 0 497 1 26 0 0 0 chr2 36434515 36434541 -214253313 + AT_rich Low_complexity Low_complexity 1 26 0 2243 43 11 0 chr2 36434541 36434819 -214253035 - L1PA5 LINE L1 -7 6147 5867 252 125 50 0 chr2 36434819 36434859 -214252995 + L1P5 LINE L1 5680 5721 -430 7249 181 49 78 chr2 36435872 36437679 -214250175 + MER52A LTR ERV1 1 1755 0 974 249 75 19 chr2 36439478 36439799 -214248055 + MER2 DNA MER2_type 2 340 -4 736 104 64 8 chr2 36440027 36440152 -214247702 - AluSp/q SINE Alu -2 311 180 237 337 143 0 chr2 36440197 36440295 -214247559 + MIR3 SINE MIR 89 200 -8 22 35 0 0 chr2 36440365 36440394 -214247460 + AT_rich Low_complexity Low_complexity 1 29 0 2009 152 0 0 chr2 36440399 36440708 -214247146 + AluSx SINE Alu 1 309 -3 2243 62 0 7 chr2 36440967 36441240 -214246614 - AluY SINE Alu -20 291 21 209 371 21 0 chr2 36442527 36442667 -214245187 + L2 LINE L2 2644 2786 -528 265 304 101 19 chr2 36442926 36443084 -214244770 + MLT1I LTR MaLR 39 209 -200 251 143 0 0 chr2 36444565 36444600 -214243254 + Alu SINE Alu 2 36 -267 1226 91 81 16 chr2 36444603 36444789 -214243065 + AluSg/x SINE Alu 107 304 -8 324 238 0 48 chr2 36446069 36446153 -214241701 + L1MC4 LINE L1 6624 6703 -1339 613 278 117 68 chr2 36446229 36446683 -214241171 + MLT1H LTR MaLR 62 537 -12 2068 112 7 0 chr2 36447017 36447304 -214240550 + AluSq SINE Alu 1 289 -24 383 244 104 0 chr2 36447427 36447562 -214240292 - MER20B DNA MER1_type -41 742 594 644 249 68 42 chr2 36447690 36447927 -214239927 - MER20B DNA MER1_type -416 367 125 817 294 89 23 chr2 36448235 36448718 -214239136 - HAL1 LINE L1 -335 2172 1658 290 380 97 8 chr2 36449031 36449268 -214238586 - HAL1 LINE L1 -1926 581 324 1771 166 0 3 chr2 36449672 36449956 -214237898 + AluSx SINE Alu 3 285 -27 838 282 86 67 chr2 36450539 36451835 -214236019 - L1M4 LINE L1 -2159 3987 2668 923 226 26 34 chr2 36451878 36452144 -214235710 - L1MC3 LINE L1 -163 7622 7359 819 346 61 66 chr2 36452149 36453602 -214234252 - L1MEc LINE L1 -958 5424 3980 5766 221 41 79 chr2 36453652 36455379 -214232475 - L1 LINE L1 -1510 4636 2976 23 54 0 0 chr2 36455539 36455576 -214232278 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 36455608 36455629 -214232225 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 36455759 36455784 -214232070 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36455824 36455849 -214232005 + AT_rich Low_complexity Low_complexity 1 25 0 194 156 22 0 chr2 36455892 36455937 -214231917 + CT-rich Low_complexity Low_complexity 1 46 0 394 287 139 43 chr2 36455966 36456871 -214230983 - L1MEc LINE L1 -2914 3468 2477 420 300 137 23 chr2 36456942 36457285 -214230569 - L1MEc LINE L1 -4109 2454 2073 504 297 75 65 chr2 36457301 36457935 -214229919 - L1MEc LINE L1 -4443 1939 1173 216 149 0 0 chr2 36458643 36458690 -214229164 + (CAAAAA)n Simple_repeat Simple_repeat 4 50 0 324 0 0 0 chr2 36461916 36461952 -214225902 + (TG)n Simple_repeat Simple_repeat 2 37 0 888 194 68 10 chr2 36463204 36463410 -214224444 + MER20 DNA MER1_type 1 218 -1 553 252 49 0 chr2 36463462 36463605 -214224249 + L2 LINE L2 3164 3313 0 1073 184 67 79 chr2 36463795 36464110 -214223744 - L1MA9 LINE L1 -38 6274 5964 1268 143 23 19 chr2 36464110 36464326 -214223528 - Tigger3b DNA MER2_type -741 490 274 587 188 10 0 chr2 36464324 36464425 -214223429 - Tigger3b DNA MER2_type -1129 102 1 * 279 89 22 0 chr2 36464474 36464519 -214223335 - MADE1 DNA Mariner 0 80 35 332 121 0 52 chr2 36464826 36464884 -214222970 + MLT1A1 LTR MaLR 1 55 -412 * 971 178 37 11 chr2 36464880 36465071 -214222783 + MLT1A1 LTR MaLR 170 365 0 564 292 97 84 chr2 36465078 36465674 -214222180 - HAL1b LINE L1 -650 698 95 180 77 0 0 chr2 36466263 36466289 -214221565 + (CAAAG)n Simple_repeat Simple_repeat 1 26 0 251 227 0 68 chr2 36466350 36466438 -214221416 - L1MC/D LINE L1 -1926 5882 5801 21 0 0 0 chr2 36467168 36467189 -214220665 + AT_rich Low_complexity Low_complexity 1 21 0 2186 128 0 0 chr2 36467217 36467522 -214220332 - AluSx SINE Alu -7 305 1 1384 167 9 66 chr2 36467948 36468266 -214219588 - AluJo SINE Alu -12 300 1 405 397 15 15 chr2 36469678 36469877 -214217977 + MIR SINE MIR 20 218 -44 2220 105 12 6 chr2 36469919 36470262 -214217592 - THE1C-int LTR MaLR -1233 347 3 2550 48 0 10 chr2 36470281 36470594 -214217260 - AluY SINE Alu -1 310 1 931 106 8 0 chr2 36470594 36470726 -214217128 - THE1C LTR MaLR -6 369 237 2244 101 0 0 chr2 36471236 36471534 -214216320 + AluSc SINE Alu 1 298 -11 250 225 175 58 chr2 36472023 36472143 -214215711 - MER5A DNA MER1_type -1 188 55 1709 141 0 57 chr2 36475158 36475313 -214212541 - AluSx SINE Alu -30 282 151 2193 110 0 10 chr2 36475313 36475613 -214212241 - AluSx SINE Alu -15 297 1 1709 141 0 57 chr2 36475613 36475756 -214212098 - AluSx SINE Alu -161 151 1 2313 78 0 31 chr2 36475989 36476308 -214211546 - AluY SINE Alu 0 311 3 355 274 49 10 chr2 36476845 36476947 -214210907 - MIR SINE MIR -50 212 107 23 33 0 0 chr2 36476963 36476993 -214210861 + AT_rich Low_complexity Low_complexity 1 30 0 228 153 51 0 chr2 36477166 36477225 -214210629 + (TA)n Simple_repeat Simple_repeat 1 62 0 490 297 26 0 chr2 36477238 36477393 -214210461 - LTR16A LTR ERVL -9 441 283 25 51 0 0 chr2 36478289 36478328 -214209526 + AT_rich Low_complexity Low_complexity 1 39 0 275 301 41 49 chr2 36479271 36479394 -214208460 + MIR SINE MIR 1 122 -140 620 275 42 5 chr2 36479453 36479642 -214208212 + L2 LINE L2 3107 3302 -11 236 288 234 5 chr2 36479737 36479921 -214207933 + MIR SINE MIR 36 261 -1 21 89 0 0 chr2 36480640 36480696 -214207158 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 36480898 36480921 -214206933 + AT_rich Low_complexity Low_complexity 1 23 0 1052 316 76 8 chr2 36480934 36481330 -214206524 - LTR16A LTR ERVL -9 441 19 943 272 13 8 chr2 36481897 36482132 -214205722 + LTR16A LTR ERVL 204 439 -11 1468 334 59 32 chr2 36482676 36483494 -214204360 + HERV16 LTR ERVL 734 1573 -3423 954 189 37 65 chr2 36483518 36483735 -214204119 + MER20 DNA MER1_type 1 211 -8 977 281 93 70 chr2 36483761 36484301 -214203553 + HERV16 LTR ERVL 1659 2210 -2786 3587 270 110 36 chr2 36484546 36486146 -214201708 + L1ME LINE L1 254 1733 -4347 1048 228 29 63 chr2 36486146 36486524 -214201330 - MLT1A1 LTR MaLR 0 365 1 3587 270 110 36 chr2 36486524 36488073 -214199781 + L1ME LINE L1 1733 3165 -2915 2224 96 0 3 chr2 36488073 36488365 -214199489 - AluSg1 SINE Alu -18 291 1 3587 270 110 36 chr2 36488365 36489094 -214198760 + L1ME LINE L1 3165 4418 -1662 1967 151 3 0 chr2 36489094 36489399 -214198455 + AluSx SINE Alu 1 306 -6 3587 270 110 36 chr2 36489399 36489476 -214198378 + L1ME LINE L1 4418 4488 -1592 744 199 75 70 chr2 36489478 36489664 -214198190 + MLT2B1 LTR ERVL 150 336 -184 1594 281 64 12 chr2 36489664 36490911 -214196943 + L1ME LINE L1 4757 6094 -10 1638 322 55 45 chr2 36490943 36492072 -214195782 + HERV16 LTR ERVL 2268 3076 -1920 6609 174 31 26 chr2 36492307 36493694 -214194160 - Ricksha DNA DNA -11 3235 1882 587 162 0 18 chr2 36493692 36493803 -214194051 - Ricksha DNA DNA -1071 110 2 * 1913 157 6 10 chr2 36493876 36494189 -214193665 + AluSx SINE Alu 1 312 0 827 318 68 23 chr2 36495611 36496010 -214191844 + LTR16A LTR ERVL 12 428 -22 346 273 123 45 chr2 36496043 36496197 -214191657 + L1MEd LINE L1 594 759 -5360 733 242 79 44 chr2 36496206 36496611 -214191243 + L1MEd LINE L1 791 1209 -4910 21 0 0 0 chr2 36496646 36496667 -214191187 + AT_rich Low_complexity Low_complexity 1 21 0 245 250 29 0 chr2 36496780 36496848 -214191006 + L1MEd LINE L1 1293 1362 -4767 1225 181 28 113 chr2 36497027 36497426 -214190428 - MLT1A1 LTR MaLR 0 365 1 206 179 60 0 chr2 36498490 36498557 -214189297 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 2298 97 0 0 chr2 36498948 36499256 -214188598 + AluSg SINE Alu 1 308 -2 1983 175 86 2 chr2 36500154 36500549 -214187305 - MSTB1 LTR MaLR -4 428 1 2272 99 3 3 chr2 36500930 36501243 -214186611 + AluSp SINE Alu 1 313 0 316 0 45 0 chr2 36502857 36502901 -214184953 + (TG)n Simple_repeat Simple_repeat 1 46 0 180 0 0 0 chr2 36502900 36502920 -214184934 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 537 250 54 14 chr2 36503165 36503313 -214184541 + L2 LINE L2 3160 3313 0 252 374 0 0 chr2 36503333 36503424 -214184430 + L2 LINE L2 3203 3293 -20 270 284 14 0 chr2 36503643 36503717 -214184137 - MIR SINE MIR -14 248 174 2310 113 8 41 chr2 36503722 36504110 -214183744 + THE1C LTR MaLR 1 375 0 446 274 57 8 chr2 36504121 36504245 -214183609 - MIR SINE MIR -110 152 23 443 208 0 40 chr2 36504289 36504390 -214183464 - MER2 DNA MER2_type -248 97 1 319 286 146 11 chr2 36504633 36504811 -214183043 + MIR SINE MIR 60 261 -1 3446 187 31 42 chr2 36504944 36505164 -214182690 - MER44D DNA MER2_type -1889 598 377 2328 142 53 5 chr2 36505164 36505580 -214182274 - L1PA16 LINE L1 -11 6155 5720 3446 187 31 42 chr2 36505580 36506092 -214181762 - MER44D DNA MER2_type -2110 377 2 202 377 9 44 chr2 36506300 36506414 -214181440 - MIR SINE MIR -83 125 16 840 169 0 0 chr2 36506613 36506761 -214181093 - L1MA3 LINE L1 0 7724 7577 1810 172 49 58 chr2 36506761 36507312 -214180542 - MLT2A2 LTR ERVL 0 554 1 12363 168 38 53 chr2 36507312 36507531 -214180323 - L1MA3 LINE L1 -143 7581 7360 3746 42 0 0 chr2 36507531 36507985 -214179869 - L1PA4 LINE L1 0 6155 5702 12363 168 38 53 chr2 36507985 36510199 -214177655 - L1MA3 LINE L1 -364 7360 5114 234 0 0 0 chr2 36510199 36510225 -214177629 + (TTA)n Simple_repeat Simple_repeat 2 27 0 12363 168 38 53 chr2 36510225 36511363 -214176491 - L1MA3 LINE L1 -2610 5114 3960 2340 103 3 0 chr2 36511363 36511674 -214176180 - AluSx SINE Alu 0 312 1 12363 168 38 53 chr2 36511674 36512709 -214175145 - L1MA3 LINE L1 -3764 3960 3082 1985 127 24 63 chr2 36512709 36513088 -214174766 - THE1B LTR MaLR 0 364 1 12363 168 38 53 chr2 36513088 36514258 -214173596 - L1MA3 LINE L1 -4642 3082 1896 2488 217 2 14 chr2 36514251 36514762 -214173092 - L1MA3 LINE L1 -7048 517 13 * 2148 236 63 22 chr2 36515092 36515668 -214172186 - L1M4 LINE L1 -1870 4276 3672 1529 278 41 8 chr2 36515668 36516154 -214171700 - MLT1D LTR MaLR 0 505 4 2148 236 63 22 chr2 36516154 36516200 -214171654 - L1M4 LINE L1 -2474 3672 3629 647 234 31 26 chr2 36516201 36516393 -214171461 + L1MB8 LINE L1 5985 6177 -1 26 30 0 0 chr2 36516625 36516658 -214171196 + AT_rich Low_complexity Low_complexity 1 33 0 184 333 132 65 chr2 36516922 36517686 -214170168 - L2 LINE L2 -423 2891 2077 45 45 0 0 chr2 36517690 36517756 -214170098 + AT_rich Low_complexity Low_complexity 1 66 0 308 333 48 48 chr2 36518231 36518420 -214169434 + L1ME LINE L1 4 192 -5878 211 213 21 0 chr2 36518559 36518606 -214169248 + MIR SINE MIR 162 209 -53 2083 117 3 3 chr2 36519910 36520218 -214167636 + AluSc SINE Alu 1 308 -1 387 41 0 0 chr2 36521926 36521975 -214165879 + (TG)n Simple_repeat Simple_repeat 2 50 0 190 260 0 96 chr2 36522355 36522428 -214165426 + MER5A DNA MER1_type 124 189 0 799 277 47 16 chr2 36523251 36523504 -214164350 - MIR SINE MIR 0 262 2 276 332 58 23 chr2 36524009 36524319 -214163535 - L1ME LINE L1 -286 5884 5564 25 0 0 0 chr2 36524539 36524564 -214163290 + AT_rich Low_complexity Low_complexity 1 25 0 625 344 80 35 chr2 36524719 36525460 -214162394 - L1ME LINE L1 -1301 4845 4072 245 214 0 100 chr2 36525911 36525981 -214161873 + MLT1F1 LTR MaLR 55 117 -450 1889 199 49 76 chr2 36525986 36526594 -214161260 + L1MD3 LINE L1 7402 7993 -2 188 111 28 0 chr2 36527128 36527164 -214160690 + GA-rich Low_complexity Low_complexity 4 40 0 319 293 16 0 chr2 36527515 36527638 -214160216 - L1MC5 LINE L1 -466 7495 7371 1035 188 132 91 chr2 36527650 36527996 -214159858 - L1MC5 LINE L1 -823 7138 6765 191 36 36 0 chr2 36527996 36528024 -214159830 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1035 188 132 91 chr2 36528024 36528162 -214159692 - L1MC5 LINE L1 -1196 6765 6634 784 281 102 61 chr2 36528755 36529360 -214158494 - L1MC5 LINE L1 -1883 5925 5296 1557 189 3 10 chr2 36529392 36529693 -214158161 - AluJo SINE Alu 0 312 14 994 232 99 0 chr2 36529784 36530056 -214157798 - MER58B DNA MER1_type 0 341 43 14197 189 18 4 chr2 36530083 36534101 -214153753 - L1MA3 LINE L1 0 7724 3649 2540 170 20 38 chr2 36534094 36534594 -214153260 - L1MA3 LINE L1 -7060 505 15 * 604 330 71 35 chr2 36534594 36535396 -214152458 - L1MC5 LINE L1 -1946 4200 3370 2371 163 9 32 chr2 36535506 36535942 -214151912 + MSTB LTR MaLR 1 426 0 21 36 0 0 chr2 36536305 36536333 -214151521 + AT_rich Low_complexity Low_complexity 1 28 0 37 23 0 0 chr2 36537455 36537499 -214150355 + AT_rich Low_complexity Low_complexity 1 44 0 265 264 204 30 chr2 36537933 36538134 -214149720 - HAL1b LINE L1 -733 615 380 31 44 0 0 chr2 36538238 36538283 -214149571 + AT_rich Low_complexity Low_complexity 1 45 0 212 215 62 0 chr2 36538337 36538402 -214149452 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 24 32 0 0 chr2 36538789 36538820 -214149034 + AT_rich Low_complexity Low_complexity 1 31 0 210 143 0 48 chr2 36540843 36540885 -214146969 + (TAAAAA)n Simple_repeat Simple_repeat 1 40 0 1004 239 40 71 chr2 36540960 36541381 -214146473 + L1ME LINE L1 4997 5406 -835 2198 94 10 10 chr2 36541381 36541689 -214146165 + AluSq SINE Alu 2 309 -4 1004 239 40 71 chr2 36541689 36541780 -214146074 + L1ME LINE L1 5406 5498 -743 241 293 49 37 chr2 36542557 36542639 -214145215 + L2 LINE L2 3189 3271 -1 2754 22 0 0 chr2 36543908 36544222 -214143632 - AluYb8 SINE Alu -4 314 1 26 0 0 0 chr2 36544635 36544661 -214143193 + AT_rich Low_complexity Low_complexity 1 26 0 2057 120 0 10 chr2 36546617 36546916 -214140938 - AluSg SINE Alu -14 296 1 272 227 23 91 chr2 36546917 36547005 -214140849 + MIR SINE MIR 88 169 -93 22 0 0 0 chr2 36547033 36547055 -214140799 + AT_rich Low_complexity Low_complexity 1 22 0 2272 272 87 44 chr2 36547159 36547294 -214140560 - L1M4 LINE L1 -1820 4326 4198 312 27 0 0 chr2 36547294 36547331 -214140523 + (TG)n Simple_repeat Simple_repeat 2 38 0 1835 196 75 8 chr2 36547336 36547735 -214140119 - MSTB LTR MaLR 0 426 1 2272 272 87 44 chr2 36547735 36548201 -214139653 - L1M4 LINE L1 -1951 4195 3750 1849 147 40 0 chr2 36548201 36548500 -214139354 - AluSx SINE Alu -1 311 1 2272 272 87 44 chr2 36548500 36549743 -214138111 - L1M4 LINE L1 -2396 3750 2396 21 36 0 0 chr2 36550057 36550085 -214137769 + AT_rich Low_complexity Low_complexity 1 28 0 786 220 17 62 chr2 36550525 36550766 -214137088 - L1M4 LINE L1 -1244 4902 4673 1038 267 74 30 chr2 36551142 36551546 -214136308 - L1ME1 LINE L1 -5 6144 5723 920 248 44 35 chr2 36551541 36552083 -214135771 - L1ME1 LINE L1 -822 5307 4704 * 696 277 11 11 chr2 36552086 36552274 -214135580 + MER58A DNA MER1_type 37 224 0 38 22 0 0 chr2 36552365 36552410 -214135444 + AT_rich Low_complexity Low_complexity 1 45 0 338 317 116 39 chr2 36552567 36552851 -214135003 + L1ME LINE L1 5491 5796 -325 395 342 40 13 chr2 36553787 36554015 -214133839 - MIR SINE MIR -16 246 13 291 318 119 35 chr2 36554877 36555573 -214132281 + HAL1 LINE L1 947 1701 -806 1504 169 91 20 chr2 36555688 36556038 -214131816 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 36556063 36556084 -214131770 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 36556431 36556459 -214131395 + AT_rich Low_complexity Low_complexity 1 28 0 347 202 20 130 chr2 36556709 36556955 -214130899 + HAL1b LINE L1 746 2350 -157 198 192 0 0 chr2 36557017 36557069 -214130785 + (TA)n Simple_repeat Simple_repeat 1 52 0 429 229 0 38 chr2 36557173 36557278 -214130576 - HsTC2 DNA Tc2 -1793 105 5 1570 254 62 81 chr2 36558225 36558952 -214128902 + L1M3e LINE L1 466 1178 -6311 3253 249 51 71 chr2 36558976 36560292 -214127562 + L1M3e LINE L1 2011 3289 -4276 300 53 0 0 chr2 36560292 36560330 -214127524 + (TG)n Simple_repeat Simple_repeat 1 38 0 3253 249 51 71 chr2 36560330 36560652 -214127202 + L1M3e LINE L1 3289 3616 -3949 985 292 144 7 chr2 36560707 36561388 -214126466 - L1ME1 LINE L1 -1745 4384 3611 602 244 36 36 chr2 36561407 36561575 -214126279 - FAM SINE Alu -17 168 1 260 244 77 0 chr2 36561621 36561699 -214126155 - L1ME1 LINE L1 -2590 3539 3456 1159 294 58 40 chr2 36562851 36563668 -214124186 - L1ME1 LINE L1 -3050 3079 2249 248 261 269 27 chr2 36563857 36564114 -214123740 - L1ME1 LINE L1 -4654 1656 1338 312 368 13 13 chr2 36564218 36564373 -214123481 - L1ME1 LINE L1 -4910 1209 1055 27 0 0 0 chr2 36565322 36565349 -214122505 + AT_rich Low_complexity Low_complexity 1 27 0 436 320 45 17 chr2 36565850 36566028 -214121826 + MIR SINE MIR 22 204 -58 209 157 0 39 chr2 36566686 36566737 -214121117 + A-rich Low_complexity Low_complexity 1 49 0 1694 150 43 40 chr2 36567359 36567733 -214120121 - THE1C LTR MaLR 0 375 1 187 230 70 50 chr2 36567739 36567839 -214120015 - MIR SINE MIR -10 252 151 232 397 26 0 chr2 36568091 36568169 -214119685 - L3 LINE CR1 -3 1574 1495 191 439 9 0 chr2 36568691 36568805 -214119049 - L2 LINE L2 -635 2679 2565 243 0 0 0 chr2 36569125 36569152 -214118702 + (CA)n Simple_repeat Simple_repeat 2 28 0 6057 174 23 26 chr2 36571574 36574514 -214113340 + L1PA11 LINE L1 10 2957 -3532 859 30 0 0 chr2 36574514 36574614 -214113240 + L1PA3 LINE L1 6052 6152 -3 6057 174 23 26 chr2 36574614 36578049 -214109805 + L1PA11 LINE L1 2957 6488 -1 397 232 0 0 chr2 36578137 36578206 -214109648 - Tigger2 DNA MER2_type -10 2708 2640 1275 156 128 12 chr2 36578206 36578492 -214109362 - AluSg1 SINE Alu 0 315 1 6717 156 44 14 chr2 36578492 36579685 -214108169 - Tigger2 DNA MER2_type -60 2658 1430 3511 160 26 14 chr2 36579679 36580328 -214107526 - Tigger2 DNA MER2_type -2057 661 5 * 1805 134 66 41 chr2 36580752 36581117 -214106737 + THE1C LTR MaLR 1 374 -1 357 340 31 12 chr2 36581124 36581286 -214106568 + L1MCa LINE L1 1029 1193 -5233 1540 230 13 10 chr2 36581320 36581624 -214106230 + L1M4b LINE L1 8 312 -6547 * 3719 242 66 15 chr2 36581619 36582630 -214105224 + L1M4b LINE L1 523 1585 -5274 593 264 48 50 chr2 36582628 36583010 -214104844 + L1PBa LINE L1 1593 1988 -4228 * 966 162 62 0 chr2 36583103 36583282 -214104572 - L1PB4 LINE L1 -3 6153 5964 5437 255 33 48 chr2 36583389 36585446 -214102408 + L1M4b LINE L1 2618 4704 -2253 2072 90 36 7 chr2 36585446 36585723 -214102131 + AluY SINE Alu 1 285 -26 5437 255 33 48 chr2 36585723 36585953 -214101901 + L1M4b LINE L1 4704 4936 -2021 348 83 0 0 chr2 36585953 36586001 -214101853 + (TAA)n Simple_repeat Simple_repeat 2 49 0 5437 255 33 48 chr2 36586001 36586571 -214101283 + L1M4b LINE L1 4936 5414 -1543 1637 227 39 32 chr2 36586575 36586720 -214101134 + L1MB8 LINE L1 5327 5469 -1488 11303 30 2 1 chr2 36586720 36588843 -214099011 + L1PA4 LINE L1 4028 6154 -1 1637 227 39 32 chr2 36588843 36588973 -214098881 + L1MB8 LINE L1 5469 5597 -1360 357 24 0 0 chr2 36588973 36589015 -214098839 + (TG)n Simple_repeat Simple_repeat 2 43 0 1637 227 39 32 chr2 36589015 36589271 -214098583 + L1MB8 LINE L1 5597 5863 -1094 2194 178 72 38 chr2 36589289 36590070 -214097784 + L1MB8 LINE L1 5815 6619 -376 4837 110 13 7 chr2 36590087 36590841 -214097013 - L1MA1 LINE L1 0 7721 6963 862 159 0 0 chr2 36590842 36590974 -214096880 + AluJb SINE Alu 1 132 -180 14352 173 20 31 chr2 36590981 36591761 -214096093 - L1MA1 LINE L1 -745 6820 6033 2083 112 25 0 chr2 36591761 36592039 -214095815 + AluSx SINE Alu 1 285 -27 14352 173 20 31 chr2 36592039 36592194 -214095660 - L1MA1 LINE L1 -1532 6033 5878 192 40 0 0 chr2 36592194 36592219 -214095635 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 14352 173 20 31 chr2 36592219 36597607 -214090247 - L1MA1 LINE L1 -1687 5878 12 951 241 50 64 chr2 36597613 36597645 -214090209 + L1MB8 LINE L1 6614 6645 -344 13524 152 30 10 chr2 36597645 36600011 -214087843 + Tigger1 DNA MER2_type 4 2418 0 951 241 50 64 chr2 36600011 36600355 -214087499 + L1MB8 LINE L1 6645 6985 -4 2266 232 96 30 chr2 36600486 36601697 -214086157 + L1MCb LINE L1 832 2378 -4367 257 75 25 0 chr2 36601708 36601748 -214086106 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2629 247 48 22 chr2 36601755 36602746 -214085108 + L1MCb LINE L1 2540 3519 -3045 593 301 63 3 chr2 36602780 36603129 -214084725 + L1MCb LINE L1 4699 5068 -1496 34 0 0 0 chr2 36603152 36603186 -214084668 + AT_rich Low_complexity Low_complexity 1 34 0 209 200 0 0 chr2 36603268 36603313 -214084541 + (TATATG)n Simple_repeat Simple_repeat 3 47 0 252 185 0 0 chr2 36603626 36603680 -214084174 + GA-rich Low_complexity Low_complexity 3 56 0 868 181 57 76 chr2 36603730 36603940 -214083914 - MER2 DNA MER2_type -139 206 1 38355 54 52 1 chr2 36604150 36609998 -214077856 + L1PA4 LINE L1 1 6155 0 794 263 21 29 chr2 36610075 36610145 -214077709 + MLT1E1 LTR MaLR 417 486 -168 2040 143 0 7 chr2 36610145 36610445 -214077409 + AluSx SINE Alu 1 298 -14 794 263 21 29 chr2 36610445 36610614 -214077240 + MLT1E1 LTR MaLR 486 654 0 232 315 0 0 chr2 36611292 36611346 -214076508 + L2 LINE L2 3209 3262 -10 24 77 0 0 chr2 36612472 36612524 -214075330 + AT_rich Low_complexity Low_complexity 1 52 0 203 283 11 65 chr2 36613289 36613381 -214074473 - L2 LINE L2 -810 2504 2418 258 258 0 0 chr2 36614598 36614660 -214073194 - MLT1J2 LTR MaLR -28 422 361 21 36 0 0 chr2 36615216 36615244 -214072610 + AT_rich Low_complexity Low_complexity 1 28 0 278 348 14 13 chr2 36616498 36616623 -214071231 + MIR SINE MIR 22 146 -62 2480 81 41 9 chr2 36617849 36618193 -214069661 + THE1A LTR MaLR 1 355 0 11547 98 4 7 chr2 36618193 36619772 -214068082 + THE1A-int LTR MaLR 1 1574 -6 2513 82 29 3 chr2 36619777 36620120 -214067734 + THE1A LTR MaLR 1 352 -3 507 293 104 73 chr2 36621436 36621849 -214066005 + LTR33 LTR ERVL 1 426 -95 1478 258 104 43 chr2 36621851 36622390 -214065464 + MLT1G LTR MaLR 1 572 -18 339 263 42 11 chr2 36622407 36622502 -214065352 + LTR33 LTR ERVL 424 521 0 213 136 0 119 chr2 36623455 36623514 -214064340 + L2 LINE L2 3221 3272 0 2203 131 39 45 chr2 36625451 36625810 -214062044 + LTR18A LTR ERVL 1 357 0 1543 181 3 34 chr2 36625834 36626127 -214061727 + HERVL18 LTR ERVL 95 378 -5669 * 1701 188 10 9 chr2 36626122 36626631 -214061223 + HERVL18 LTR ERVL 1238 1810 -4237 1371 143 28 2 chr2 36626630 36626898 -214060956 + HERVL18 LTR ERVL 2119 2452 -3595 * 5197 167 2 25 chr2 36626897 36627776 -214060078 + HERVL18 LTR ERVL 2720 3578 -2469 650 128 11 0 chr2 36627779 36627873 -214059981 + HERVL18 LTR ERVL 4394 4488 -1559 2274 126 22 44 chr2 36628141 36628506 -214059348 + LTR18A LTR ERVL 1 357 0 1486 114 22 13 chr2 36628942 36629170 -214058684 + MER50 LTR ERV1 3 232 -502 1441 133 13 94 chr2 36629172 36629481 -214058373 + MER50 LTR ERV1 435 718 -16 432 0 0 0 chr2 36629481 36629529 -214058325 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 210 71 0 0 chr2 36629530 36629558 -214058296 + (CATA)n Simple_repeat Simple_repeat 1 28 0 948 266 149 0 chr2 36629872 36630154 -214057700 - MLT1G1 LTR MaLR -5 590 267 931 314 93 20 chr2 36631393 36631980 -214055874 + L2 LINE L2 2606 3312 -1 219 171 0 0 chr2 36633013 36633054 -214054800 + MIR3 SINE MIR 168 208 0 334 324 70 38 chr2 36635937 36636122 -214051732 + MIR SINE MIR 2 192 -70 204 111 0 0 chr2 36637219 36637255 -214050599 + (CAA)n Simple_repeat Simple_repeat 2 37 0 2107 143 7 0 chr2 36637261 36637568 -214050286 + AluSx SINE Alu 2 310 -2 2834 19 0 0 chr2 36637653 36637973 -214049881 - L1PA4 LINE L1 -383 5772 5453 3195 33 5 8 chr2 36637973 36638361 -214049493 + L1PA4 LINE L1 5762 6155 0 190 278 56 0 chr2 36638362 36638416 -214049438 + MER5A DNA MER1_type 61 117 -72 419 259 97 30 chr2 36639121 36639307 -214048547 + LTR33A LTR ERVL 59 247 -274 246 343 97 0 chr2 36639717 36639895 -214047959 - MIR3 SINE MIR -7 201 3 255 410 0 0 chr2 36640560 36640643 -214047211 + MIR SINE MIR 4 86 -176 327 128 0 0 chr2 36640973 36641020 -214046834 + L1PBa LINE L1 1109 1155 -5708 9990 207 27 10 chr2 36641026 36644722 -214043132 + L1PBa LINE L1 1311 5090 -1772 2209 116 17 9 chr2 36644827 36645173 -214042681 + L1PA11 LINE L1 5825 6173 -1 400 232 0 0 chr2 36645261 36645330 -214042524 - Tigger2 DNA MER2_type -10 2708 2640 1304 156 128 12 chr2 36645330 36645616 -214042238 - AluSg1 SINE Alu 0 315 1 6703 156 44 14 chr2 36645616 36646809 -214041045 - Tigger2 DNA MER2_type -60 2658 1430 3471 160 26 14 chr2 36646803 36647452 -214040402 - Tigger2 DNA MER2_type -2057 661 5 * 1824 134 66 41 chr2 36647876 36648241 -214039613 + THE1C LTR MaLR 1 374 -1 227 281 44 44 chr2 36648296 36648410 -214039444 + L1MCa LINE L1 1080 1193 -5233 1537 230 13 10 chr2 36648444 36648748 -214039106 + L1M4b LINE L1 8 312 -6547 * 3697 239 67 16 chr2 36648743 36649754 -214038100 + L1M4b LINE L1 523 1585 -5274 568 264 48 50 chr2 36649752 36650134 -214037720 + L1PBa LINE L1 1593 1988 -4228 * 977 162 62 0 chr2 36650227 36650406 -214037448 - L1PB4 LINE L1 -3 6153 5964 6232 261 33 41 chr2 36650513 36652570 -214035284 + L1M4b LINE L1 2618 4690 -2267 2072 90 36 7 chr2 36652570 36652847 -214035007 + AluY SINE Alu 1 285 -26 6232 261 33 41 chr2 36652847 36653077 -214034777 + L1M4b LINE L1 4690 4920 -2037 369 62 0 0 chr2 36653077 36653125 -214034729 + (TAA)n Simple_repeat Simple_repeat 2 49 0 6232 261 33 41 chr2 36653125 36653695 -214034159 + L1M4b LINE L1 4920 5414 -1543 457 246 48 36 chr2 36653699 36653866 -214033988 + L1M4 LINE L1 5327 5495 -1462 * 11321 33 3 0 chr2 36653844 36655829 -214032025 + L1PA5 LINE L1 4839 6828 -137 644 236 11 22 chr2 36655830 36656012 -214031842 - L1M4 LINE L1 -785 5361 5182 1452 135 38 0 chr2 36656087 36656353 -214031501 + L1MA4 LINE L1 6014 6289 -11 444 319 58 16 chr2 36656407 36656595 -214031259 + L2 LINE L2 2936 3131 -182 362 188 0 0 chr2 36657030 36657094 -214030760 + L2 LINE L2 3207 3270 -2 240 194 32 16 chr2 36657096 36657158 -214030696 + GA-rich Low_complexity Low_complexity 3 65 0 2419 93 0 3 chr2 36659033 36659344 -214028510 + AluSq SINE Alu 1 310 -3 495 350 14 18 chr2 36659968 36660185 -214027669 + MLT1I LTR MaLR 3 218 -191 2656 117 7 21 chr2 36660209 36660382 -214027472 + L1PA13 LINE L1 5725 5899 -264 2382 141 6 3 chr2 36660382 36660745 -214027109 - THE1B LTR MaLR 0 364 1 2656 117 7 21 chr2 36660745 36660997 -214026857 + L1PA13 LINE L1 5899 6144 -19 1620 281 28 67 chr2 36661104 36661494 -214026360 + MLT1E LTR MaLR 3 407 -186 2256 122 0 0 chr2 36661494 36661806 -214026048 + AluSx SINE Alu 1 312 0 1620 281 28 67 chr2 36661806 36661924 -214025930 + MLT1E LTR MaLR 407 485 -108 1366 106 37 5 chr2 36661924 36662142 -214025712 - L1PA11 LINE L1 -1 6173 5949 1620 281 28 67 chr2 36662142 36662247 -214025607 + MLT1E LTR MaLR 485 593 0 247 270 0 0 chr2 36662247 36662310 -214025544 + MLT1I LTR MaLR 345 407 -2 263 183 17 0 chr2 36662387 36662480 -214025374 + AluSc SINE Alu 239 332 0 240 191 0 0 chr2 36663030 36663077 -214024777 + (GAATG)n Simple_repeat Simple_repeat 1 47 0 1719 211 53 17 chr2 36663784 36664259 -214023595 + Charlie4a DNA MER1_type 16 507 -1 420 280 65 12 chr2 36665636 36665804 -214022050 + MIR SINE MIR 79 255 -7 1539 177 63 23 chr2 36666261 36666612 -214021242 + MLT1A1 LTR MaLR 1 365 0 287 291 0 23 chr2 36666659 36666745 -214021109 + GA-rich Low_complexity Low_complexity 4 87 0 1641 129 0 0 chr2 36667531 36667764 -214020090 - AluSg/x SINE Alu -3 307 75 202 318 57 23 chr2 36667768 36667856 -214019998 - MIR SINE MIR -85 123 33 330 285 44 36 chr2 36669628 36669765 -214018089 + L1MEc LINE L1 211 348 -6048 1792 277 77 50 chr2 36669852 36670779 -214017075 + L1MEc LINE L1 513 1488 -4908 2730 10 10 7 chr2 36670779 36671088 -214016766 + AluYa5 SINE Alu 1 310 -1 1792 277 77 50 chr2 36671088 36671492 -214016362 + L1MEc LINE L1 1488 1880 -4516 210 37 0 0 chr2 36671509 36671536 -214016318 + (CA)n Simple_repeat Simple_repeat 2 28 0 3434 231 56 27 chr2 36671695 36672950 -214014904 + L1MEc LINE L1 2145 3420 -2795 2116 129 3 0 chr2 36672950 36673244 -214014610 - AluSq SINE Alu -18 295 1 3434 231 56 27 chr2 36673244 36673382 -214014472 + L1MEc LINE L1 3420 3552 -2663 2228 171 15 6 chr2 36673405 36673942 -214013912 - L1MA9 LINE L1 -623 5689 5149 2359 165 57 90 chr2 36673945 36674580 -214013274 + L1MA9 LINE L1 5664 6277 -35 1444 237 65 40 chr2 36674618 36675191 -214012663 + L1MEc LINE L1 3599 4185 -2030 457 323 76 31 chr2 36675386 36675674 -214012180 - L1M4 LINE L1 -3642 3923 3623 393 268 121 13 chr2 36676020 36676177 -214011677 - MIR3 SINE MIR -15 193 20 307 113 32 0 chr2 36677879 36677941 -214009913 + (CA)n Simple_repeat Simple_repeat 2 65 0 426 231 77 54 chr2 36678332 36678553 -214009301 - HAL1 LINE L1 -1035 1472 1247 1611 124 8 24 chr2 36679410 36679659 -214008195 - THE1C LTR MaLR -130 245 1 4289 203 33 11 chr2 36679659 36681418 -214006436 - L1M4 LINE L1 -5651 1914 15 21 36 0 0 chr2 36681425 36681453 -214006401 + AT_rich Low_complexity Low_complexity 1 28 0 272 243 40 0 chr2 36681620 36681694 -214006160 + LTR67 LTR ERVL 399 475 -82 781 228 63 0 chr2 36683402 36683639 -214004215 - MER20B DNA MER1_type -7 776 525 841 285 19 0 chr2 36683808 36684022 -214003832 - MIR SINE MIR -22 240 23 181 319 0 28 chr2 36684040 36684112 -214003742 + MER5A DNA MER1_type 67 136 -53 372 123 0 0 chr2 36684806 36684879 -214002975 + (TTAG)n Simple_repeat Simple_repeat 1 73 0 236 135 0 0 chr2 36684885 36684922 -214002932 - Charlie8 DNA MER1_type -2264 153 117 512 222 105 0 chr2 36685210 36685363 -214002491 - MER20B DNA MER1_type -7 776 608 233 329 77 45 chr2 36685548 36685703 -214002151 + MIR SINE MIR 49 208 -54 181 153 17 153 chr2 36685795 36685821 -214002033 + MIR3 SINE MIR 135 150 -58 1188 200 62 0 chr2 36685821 36686126 -214001728 - MER33 DNA MER1_type 0 324 1 181 153 17 153 chr2 36686126 36686158 -214001696 + MIR3 SINE MIR 150 185 -23 1543 176 45 4 chr2 36688366 36688524 -213999330 - AluJb SINE Alu -21 291 116 279 104 0 0 chr2 36688524 36688572 -213999282 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1543 176 45 4 chr2 36688572 36688680 -213999174 - AluJb SINE Alu -196 116 14 21 71 0 0 chr2 36688997 36689039 -213998815 + AT_rich Low_complexity Low_complexity 1 42 0 632 344 181 35 chr2 36689048 36690423 -213997431 + L2 LINE L2 1686 3259 -54 559 264 78 84 chr2 36691574 36691908 -213995946 + MLT1I LTR MaLR 60 391 -18 2842 161 25 69 chr2 36692308 36692948 -213994906 + LTR9 LTR ERV1 1 612 0 20659 165 37 10 chr2 36694393 36700241 -213987613 - L1MA3 LINE L1 0 7724 1620 420 37 0 0 chr2 36700241 36700295 -213987559 + (TG)n Simple_repeat Simple_repeat 2 55 0 20659 165 37 10 chr2 36700295 36701948 -213985906 - L1MA3 LINE L1 -6104 1620 13 314 316 65 24 chr2 36702352 36702520 -213985334 - L1ME3A LINE L1 -8 6231 6057 1002 269 112 15 chr2 36702603 36703078 -213984776 - L1ME3A LINE L1 -202 6029 5509 1129 286 63 27 chr2 36703228 36703921 -213983933 - L1ME3A LINE L1 -2105 4110 3393 1257 289 79 37 chr2 36704046 36704975 -213982879 - L1MEc LINE L1 -3135 3080 2143 2229 233 104 46 chr2 36704980 36705607 -213982247 - MLT2F LTR ERVL 0 663 1 272 313 45 0 chr2 36705872 36706006 -213981848 - L1MEc LINE L1 -4596 1800 1661 40444 70 9 2 chr2 36706238 36712342 -213975512 - L1PA5 LINE L1 -2 6152 2 233 270 66 57 chr2 36712373 36712584 -213975270 - L1MEc LINE L1 -4935 1270 1058 306 312 89 25 chr2 36713372 36713529 -213974325 - L1MEc LINE L1 -5950 255 89 564 268 6 4 chr2 36713771 36713953 -213973901 - MIR SINE MIR -1 261 5 403 307 24 31 chr2 36713940 36714067 -213973787 + L2 LINE L2 3147 3272 0 * 346 174 28 7 chr2 36714326 36714470 -213973384 + (TA)n Simple_repeat Simple_repeat 1 147 0 356 304 193 0 chr2 36714481 36714652 -213973202 - MIR SINE MIR 0 262 59 226 311 159 26 chr2 36715143 36715294 -213972560 - L2 LINE L2 -205 3067 2897 1064 199 100 33 chr2 36715775 36716046 -213971808 + AluJo SINE Alu 17 305 -7 194 261 46 46 chr2 36719246 36719311 -213968543 - L2 LINE L2 -57 3256 3192 269 247 62 52 chr2 36719550 36719647 -213968207 - MER58B DNA MER1_type 0 341 244 326 215 51 13 chr2 36720394 36720473 -213967381 - L2 LINE L2 -40 3273 3192 660 337 21 33 chr2 36720689 36720932 -213966922 + MIR SINE MIR 8 247 -15 2253 72 41 0 chr2 36721339 36721629 -213966225 - AluSp SINE Alu -11 302 1 311 273 129 22 chr2 36722051 36722190 -213965664 - MIR SINE MIR -39 223 70 26 30 0 0 chr2 36722240 36722273 -213965581 + AT_rich Low_complexity Low_complexity 1 33 0 702 244 82 7 chr2 36722792 36723034 -213964820 - LTR16A LTR ERVL 0 453 98 614 139 24 0 chr2 36723035 36723200 -213964654 + (TA)n Simple_repeat Simple_repeat 2 170 0 216 167 0 0 chr2 36723211 36723259 -213964595 + (TA)n Simple_repeat Simple_repeat 2 49 0 1816 229 68 38 chr2 36723259 36723758 -213964096 - MLT2B3 LTR ERVL -40 514 1 1873 334 58 67 chr2 36724050 36725030 -213962824 - HERV16 LTR ERVL -384 5380 4393 2125 63 46 14 chr2 36725030 36725314 -213962540 + AluY SINE Alu 1 293 -18 321 26 0 0 chr2 36725314 36725352 -213962502 + (GGAA)n Simple_repeat Simple_repeat 2 39 0 1873 334 58 67 chr2 36725352 36726309 -213961545 - HERV16 LTR ERVL -1370 4394 3459 1930 121 67 25 chr2 36726309 36726665 -213961189 + THE1C LTR MaLR 1 371 -4 1873 334 58 67 chr2 36726665 36726905 -213960949 - HERV16 LTR ERVL -2305 3459 3219 2232 286 43 33 chr2 36726924 36727965 -213959889 - HERV16 LTR ERVL -3579 1417 330 1684 268 12 14 chr2 36728030 36728456 -213959398 - LTR16A LTR ERVL 0 450 26 1264 132 44 0 chr2 36728864 36729091 -213958763 - L1MA4 LINE L1 -50 6250 6014 644 236 11 22 chr2 36729166 36729348 -213958506 + L1M4 LINE L1 5182 5361 -785 6332 38 6 0 chr2 36729349 36730717 -213957137 - L1PA5 LINE L1 -137 6017 4645 5999 47 5 0 chr2 36730718 36731464 -213956390 + L1PA5 LINE L1 3880 4629 -1517 1059 138 0 6 chr2 36731464 36731624 -213956230 + AluSg/x SINE Alu 147 305 -5 2612 241 47 12 chr2 36731770 36732537 -213955317 + L1MC4a LINE L1 7014 7807 -1 1481 218 96 77 chr2 36733062 36733708 -213954146 + LTR1B LTR ERV1 1 658 -168 499 238 8 16 chr2 36733915 36734037 -213953817 + LTR28 LTR ERV1 896 1016 -4 221 312 43 32 chr2 36735938 36736031 -213951823 - MIR SINE MIR -115 147 54 377 232 148 32 chr2 36736337 36736492 -213951362 + MER112 DNA MER1_type 2 174 -86 333 0 0 0 chr2 36737029 36737066 -213950788 + (T)n Simple_repeat Simple_repeat 1 37 0 1788 175 0 0 chr2 36737064 36737377 -213950477 - AluJb SINE Alu 0 315 3 407 296 50 45 chr2 36738408 36738628 -213949226 - MLT1L LTR MaLR -394 221 1 1183 180 197 0 chr2 36742658 36742953 -213944901 - MER47A DNA MER2_type -1 365 2 354 115 0 0 chr2 36743348 36743409 -213944445 + (TG)n Simple_repeat Simple_repeat 2 62 0 1693 169 60 41 chr2 36743493 36743861 -213943993 - THE1C LTR MaLR 0 375 1 384 228 0 41 chr2 36744717 36744840 -213943014 - L2 LINE L2 -869 2445 2328 768 223 141 12 chr2 36745251 36745493 -213942361 - MER96B DNA MER1_type? 0 417 145 4964 310 108 34 chr2 36745638 36746306 -213941548 + L2 LINE L2 115 732 -2581 1681 180 10 13 chr2 36746306 36746606 -213941248 + AluJo SINE Alu 1 299 -13 4964 310 108 34 chr2 36746606 36748015 -213939839 + L2 LINE L2 732 2493 -820 2152 211 54 16 chr2 36748015 36748513 -213939341 + MLT2B1 LTR ERVL 4 520 0 4964 310 108 34 chr2 36748513 36749393 -213938461 + L2 LINE L2 2493 3306 -7 25 0 0 0 chr2 36749579 36749604 -213938250 + AT_rich Low_complexity Low_complexity 1 25 0 568 352 72 7 chr2 36749715 36750022 -213937832 - MER102b DNA MER1_type -14 327 1 250 302 0 0 chr2 36750344 36750407 -213937447 - L2 LINE L2 0 3313 3251 321 240 74 74 chr2 36750454 36750589 -213937265 + MLT1J LTR MaLR 27 164 -347 1267 239 56 54 chr2 36750589 36751053 -213936801 + MLT1C LTR MaLR 3 467 0 321 240 74 74 chr2 36751053 36751092 -213936762 + MLT1J LTR MaLR 163 201 -310 1125 142 44 35 chr2 36751802 36752028 -213935826 + L1PA16 LINE L1 5939 6166 0 828 295 78 21 chr2 36752484 36752886 -213934968 + MLT1K LTR MaLR 142 587 -1 225 0 0 0 chr2 36753342 36753367 -213934487 + (T)n Simple_repeat Simple_repeat 1 25 0 1281 244 79 104 chr2 36753600 36754943 -213932911 + L1MC5 LINE L1 6611 7901 -60 2068 141 36 33 chr2 36755043 36755406 -213932448 + THE1B LTR MaLR 1 364 0 1541 262 95 64 chr2 36755438 36755804 -213932050 + L2 LINE L2 2410 2763 -550 1535 194 24 10 chr2 36755804 36756092 -213931762 - AluSx SINE Alu -20 292 1 1541 262 95 64 chr2 36756092 36756140 -213931714 + L2 LINE L2 2763 2808 -505 1514 143 10 108 chr2 36756140 36756454 -213931400 + AluSx SINE Alu 15 297 -15 1541 262 95 64 chr2 36756454 36756918 -213930936 + L2 LINE L2 2808 3313 0 207 0 0 0 chr2 36757026 36757049 -213930805 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 184 311 189 0 chr2 36757055 36757129 -213930725 - L2 LINE L2 -17 3255 3168 273 339 64 0 chr2 36759699 36759808 -213928046 - MIR SINE MIR -35 227 112 716 303 84 13 chr2 36761741 36762051 -213925803 - L1MEd LINE L1 -5769 350 19 24 53 0 0 chr2 36762285 36762323 -213925531 + AT_rich Low_complexity Low_complexity 1 38 0 2510 53 0 3 chr2 36762821 36763125 -213924729 + AluY SINE Alu 1 303 -8 375 266 110 12 chr2 36764159 36764333 -213923521 + L1MC1 LINE L1 5584 5776 -345 437 232 91 0 chr2 36764746 36764845 -213923009 - MER5A DNA MER1_type -80 109 2 23 0 0 0 chr2 36765069 36765092 -213922762 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 36765385 36765417 -213922437 + AT_rich Low_complexity Low_complexity 1 32 0 452 302 110 16 chr2 36766787 36766969 -213920885 - MIR SINE MIR -16 246 48 25 0 0 0 chr2 36767128 36767153 -213920701 + AT_rich Low_complexity Low_complexity 1 25 0 1893 147 4 0 chr2 36767413 36767692 -213920162 - AluSx SINE Alu -30 282 3 240 290 61 69 chr2 36767857 36767988 -213919866 - L2 LINE L2 0 3313 3184 578 234 66 62 chr2 36769653 36769880 -213917974 - L1MC4 LINE L1 -4 8038 7811 1007 261 60 55 chr2 36769921 36770072 -213917782 - L1MC4 LINE L1 -317 7725 7576 2015 134 17 0 chr2 36770072 36770370 -213917484 - AluSx SINE Alu -9 303 1 1007 261 60 55 chr2 36770370 36770804 -213917050 - L1MC4 LINE L1 -466 7576 7137 657 193 6 0 chr2 36771092 36771228 -213916626 + L1MC1 LINE L1 5833 5970 -196 1443 248 137 50 chr2 36771972 36772497 -213915357 + MLT1E2 LTR MaLR 56 626 0 1641 223 25 11 chr2 36773053 36773417 -213914437 - MLT1A2 LTR MaLR -5 369 1 1067 226 68 77 chr2 36773803 36774143 -213913711 - MER58B DNA MER1_type -4 337 1 232 305 125 51 chr2 36774821 36775047 -213912807 + MIR SINE MIR 16 254 -8 292 296 124 12 chr2 36775752 36775921 -213911933 - MIR3 SINE MIR -6 202 15 658 271 12 12 chr2 36777868 36778034 -213909820 + MER5B DNA MER1_type 13 178 0 180 282 90 39 chr2 36778291 36778369 -213909485 + L2 LINE L2 3160 3241 -31 450 286 121 22 chr2 36779391 36779622 -213908232 - MLT1K LTR MaLR 0 588 335 773 249 58 5 chr2 36779846 36780035 -213907819 + MER58A DNA MER1_type 26 224 0 5279 86 1 1 chr2 36780286 36781005 -213906849 - L1PA8 LINE L1 0 6172 5454 2152 128 0 0 chr2 36782936 36783234 -213904620 - AluSx SINE Alu -12 300 3 540 104 65 5 chr2 36783305 36783691 -213904163 + (TA)n Simple_repeat Simple_repeat 1 409 0 27 62 0 0 chr2 36783692 36783740 -213904114 + AT_rich Low_complexity Low_complexity 1 48 0 607 35 71 29 chr2 36783741 36783911 -213903943 + (TA)n Simple_repeat Simple_repeat 2 178 0 630 133 45 0 chr2 36784013 36784326 -213903528 + (TA)n Simple_repeat Simple_repeat 1 327 0 37 39 0 0 chr2 36784326 36784377 -213903477 + AT_rich Low_complexity Low_complexity 1 51 0 294 29 0 0 chr2 36784505 36784540 -213903314 + (TG)n Simple_repeat Simple_repeat 1 35 0 1192 219 46 40 chr2 36784757 36784952 -213902902 - MER110A LTR ERV1 -70 398 199 2092 92 6 57 chr2 36784952 36785268 -213902586 - AluY SINE Alu -11 300 1 1192 219 46 40 chr2 36785268 36785397 -213902457 - MER110A LTR ERV1 -269 199 72 494 299 69 6 chr2 36785416 36785590 -213902264 + MIR SINE MIR 72 256 -6 26 30 0 0 chr2 36785956 36785989 -213901865 + AT_rich Low_complexity Low_complexity 1 33 0 1581 219 35 41 chr2 36786055 36786512 -213901342 + MER89 LTR ERV1 7 559 0 242 274 0 55 chr2 36787354 36787427 -213900427 + L2 LINE L2 3201 3269 -3 2524 191 123 62 chr2 36787521 36788299 -213899555 - LTR1B LTR ERV1 0 826 1 1803 107 4 29 chr2 36790712 36790993 -213896861 + AluSq SINE Alu 1 274 -39 21 0 0 0 chr2 36791991 36792012 -213895842 + AT_rich Low_complexity Low_complexity 1 21 0 1424 197 20 58 chr2 36792132 36792500 -213895354 + MLT2B1 LTR ERVL 1 355 -59 191 139 70 0 chr2 36792501 36792544 -213895310 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 333 0 0 0 chr2 36792582 36792619 -213895235 + (TG)n Simple_repeat Simple_repeat 2 38 0 1578 164 17 17 chr2 36792707 36792994 -213894860 - AluJo SINE Alu -25 287 1 990 310 58 6 chr2 36792994 36793359 -213894495 + L2 LINE L2 2193 2576 -738 890 144 41 0 chr2 36793459 36793605 -213894249 - LTR47B LTR ERVL -291 152 1 3311 193 111 38 chr2 36793643 36793946 -213893908 + Charlie1 DNA MER1_type 1704 1983 -778 261 0 0 0 chr2 36793946 36793975 -213893879 + (CTATA)n Simple_repeat Simple_repeat 5 33 0 3311 193 111 38 chr2 36793975 36794654 -213893200 + Charlie1 DNA MER1_type 1983 2758 -3 576 299 69 37 chr2 36794795 36795012 -213892842 + L2 LINE L2 2900 3123 -190 384 269 79 20 chr2 36795044 36795297 -213892557 - L1MC5 LINE L1 -65 7896 7629 471 248 80 20 chr2 36795373 36795600 -213892254 - L1ME LINE L1 -609 5949 5711 962 248 90 6 chr2 36795616 36795959 -213891895 - L1ME LINE L1 -898 5642 5271 * 1341 260 79 49 chr2 36795957 36796553 -213891301 + L1MC4 LINE L1 7427 8040 -2 298 306 65 22 chr2 36796630 36796859 -213890995 + L1ME LINE L1 5564 5802 -319 363 221 36 0 chr2 36797709 36797836 -213890018 - L1MEc LINE L1 -3907 2637 2501 968 233 8 25 chr2 36797836 36798076 -213889778 + MLT1A1 LTR MaLR 1 236 -129 1028 313 73 22 chr2 36798497 36799548 -213888306 - L1ME3A LINE L1 -279 5891 4791 586 264 46 35 chr2 36800148 36800453 -213887401 - LTR16A1 LTR ERVL 0 457 172 39 68 0 0 chr2 36800540 36800614 -213887240 + AT_rich Low_complexity Low_complexity 1 74 0 288 0 0 0 chr2 36801088 36801120 -213886734 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 351 0 0 0 chr2 36801119 36801158 -213886696 + (CA)n Simple_repeat Simple_repeat 2 40 0 35 0 0 0 chr2 36801390 36801425 -213886429 + AT_rich Low_complexity Low_complexity 1 35 0 831 74 16 8 chr2 36801425 36801547 -213886307 - L1P LINE L1 -1866 4280 4158 279 0 0 0 chr2 36801860 36801873 -213885981 + (TG)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr2 36801873 36801904 -213885950 + (TG)n Simple_repeat Simple_repeat 2 32 0 191 246 58 29 chr2 36802067 36802136 -213885718 - L2 LINE L2 -554 2760 2690 1019 340 83 18 chr2 36802292 36802919 -213884935 - L2 LINE L2 -864 2450 1783 206 352 25 37 chr2 36803170 36803332 -213884522 + L2 LINE L2 2894 3053 -219 23 0 0 0 chr2 36804727 36804750 -213883104 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 36805199 36805227 -213882627 + AT_rich Low_complexity Low_complexity 1 28 0 731 251 38 47 chr2 36805500 36805735 -213882119 + MIR SINE MIR 8 240 -22 192 77 0 0 chr2 36805741 36805767 -213882087 + (ATG)n Simple_repeat Simple_repeat 2 27 0 951 309 51 45 chr2 36805916 36806512 -213881342 + L2 LINE L2 2429 3028 -285 840 177 57 6 chr2 36806513 36806688 -213881166 + MER53 DNA DNA 1 184 -5 498 337 96 11 chr2 36806698 36806959 -213880895 + L2 LINE L2 3028 3310 -3 347 291 7 93 chr2 36807350 36807501 -213880353 + L2 LINE L2 3175 3312 -1 1027 278 82 56 chr2 36808313 36809065 -213878789 + HAL1 LINE L1 875 1646 -861 239 305 219 13 chr2 36809096 36809247 -213878607 + HAL1 LINE L1 1728 1909 -598 221 209 15 0 chr2 36809307 36809374 -213878480 + GA-rich Low_complexity Low_complexity 1 68 0 313 276 47 16 chr2 36810175 36810302 -213877552 - MIR SINE MIR -67 195 65 4632 179 50 34 chr2 36810350 36812151 -213875703 + L1MB7 LINE L1 4212 6054 -130 2105 107 0 32 chr2 36812151 36812461 -213875393 + AluSq SINE Alu 1 300 -13 4632 179 50 34 chr2 36812461 36812571 -213875283 + L1MB7 LINE L1 6054 6161 -23 184 71 36 0 chr2 36813051 36813079 -213874775 - MER5B DNA MER1_type -138 40 12 183 323 109 52 chr2 36813462 36813654 -213874200 - MIR SINE MIR -29 233 31 2707 120 26 0 chr2 36814538 36814955 -213872899 - MSTA LTR MaLR 0 428 1 214 301 14 27 chr2 36815058 36815131 -213872723 + MER5A DNA MER1_type 7 78 -111 814 167 0 53 chr2 36815140 36815290 -213872564 + FRAM SINE Alu 11 152 -24 375 41 0 0 chr2 36815303 36815352 -213872502 + (CA)n Simple_repeat Simple_repeat 2 50 0 704 321 5 9 chr2 36816430 36816645 -213871209 - MIR SINE MIR -29 233 20 621 264 54 91 chr2 36816839 36816945 -213870909 - MLT1L LTR MaLR -224 391 283 2532 63 3 0 chr2 36816945 36817247 -213870607 - AluSp SINE Alu -8 305 3 621 264 54 91 chr2 36817247 36817546 -213870308 - MLT1L LTR MaLR -332 283 1 1997 139 0 0 chr2 36817707 36818014 -213869840 - AluSx SINE Alu 0 310 4 283 311 49 25 chr2 36818807 36818929 -213868925 - MIR3 SINE MIR -3 205 81 28 0 0 0 chr2 36820136 36820164 -213867690 + AT_rich Low_complexity Low_complexity 1 28 0 309 265 70 30 chr2 36820392 36820536 -213867318 - L1MC/D LINE L1 -925 5434 5287 23 54 0 0 chr2 36820841 36820878 -213866976 + AT_rich Low_complexity Low_complexity 1 37 0 1299 271 121 13 chr2 36821150 36821612 -213866242 + LTR33 LTR ERVL 8 519 -2 394 316 134 40 chr2 36821644 36822478 -213865376 - L1MC/D LINE L1 -1533 4613 3692 390 313 94 26 chr2 36823174 36823557 -213864297 - HAL1 LINE L1 -938 1569 1161 501 17 0 0 chr2 36825354 36825412 -213862442 + (TG)n Simple_repeat Simple_repeat 1 58 0 463 119 71 0 chr2 36825722 36825806 -213862048 + MER53 DNA DNA 94 183 -6 408 300 101 77 chr2 36828030 36828277 -213859577 + MIR SINE MIR 9 261 -1 199 248 148 101 chr2 36831004 36831106 -213856748 + MER5B DNA MER1_type 21 134 -44 1461 193 66 7 chr2 36831106 36831380 -213856474 - AluJo SINE Alu -22 290 1 199 248 148 101 chr2 36831380 36831426 -213856428 + MER5B DNA MER1_type 134 176 -2 1286 124 38 61 chr2 36831444 36831716 -213856138 + Tigger4(Zombi) DNA MER2_type 1 2731 0 1311 212 96 79 chr2 36832545 36832658 -213855196 - MLT1D LTR MaLR 0 626 516 2042 153 0 0 chr2 36832658 36832965 -213854889 + AluSg SINE Alu 3 309 -1 1311 212 96 79 chr2 36832965 36833437 -213854417 - MLT1D LTR MaLR -110 516 13 1018 67 0 0 chr2 36833955 36834090 -213853764 + L1PA7 LINE L1 6020 6154 0 392 352 49 16 chr2 36834263 36834709 -213853145 + L1ME LINE L1 5354 5814 -307 6793 131 36 20 chr2 36834979 36836141 -213851713 - L1P LINE L1 -3281 2865 1685 1618 156 58 35 chr2 36836243 36836590 -213851264 - LTR49-int LTR ERV1 -689 5642 5288 3604 107 12 43 chr2 36836690 36837332 -213850522 + L1PA8 LINE L1 5563 6185 0 205 342 81 18 chr2 36837333 36837444 -213850410 + L2 LINE L2 2703 2820 -494 535 355 63 31 chr2 36837540 36837858 -213849996 + L2 LINE L2 2945 3272 0 453 267 164 35 chr2 36837979 36838211 -213849643 + MIR SINE MIR 1 262 0 28949 36 4 1 chr2 36838944 36844476 -213843378 + L1PA3 LINE L1 606 6147 -8 30 0 0 0 chr2 36844476 36844506 -213843348 + AT_rich Low_complexity Low_complexity 1 30 0 520 234 117 51 chr2 36845012 36845209 -213842645 + MIR SINE MIR 47 256 -6 455 346 41 1 chr2 36845348 36845517 -213842337 + MIR SINE MIR 37 210 -52 2028 133 0 41 chr2 36845628 36845945 -213841909 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr2 36846057 36846078 -213841776 + AT_rich Low_complexity Low_complexity 1 21 0 220 377 36 22 chr2 36846530 36846668 -213841186 + MIR3 SINE MIR 6 145 -63 12475 40 2 0 chr2 36846677 36848284 -213839570 - L1P LINE L1 -3220 2926 1317 12097 18 10 7 chr2 36848285 36850451 -213837403 + L1PA4 LINE L1 3987 6155 0 360 371 11 6 chr2 36850603 36850778 -213837076 - MIR SINE MIR -5 257 82 5843 141 20 15 chr2 36851414 36852559 -213835295 - L1MA4A LINE L1 -6 6297 5144 222 164 0 36 chr2 36853163 36853218 -213834636 + CT-rich Low_complexity Low_complexity 4 56 0 348 299 24 0 chr2 36853703 36853830 -213834024 + L1ME4a LINE L1 5740 5869 -252 11169 122 12 2 chr2 36853851 36856319 -213831535 - L1HS LINE L1 0 6155 3661 1429 111 0 18 chr2 36856322 36856547 -213831307 - pTR5 LTR ERV1 -2046 392 172 316 220 11 0 chr2 36856550 36856641 -213831213 - LTR30 LTR ERV1 -80 642 551 4816 117 141 24 chr2 36856641 36857716 -213830138 - pTR5 LTR ERV1 -406 2032 743 14538 141 21 47 chr2 36857718 36861570 -213826284 - L1P3 LINE L1 -2487 3974 217 1984 138 0 0 chr2 36861601 36861904 -213825950 + AluSx SINE Alu 7 309 0 796 280 93 108 chr2 36861917 36862881 -213824973 - L2 LINE L2 -613 2701 1752 1034 214 108 35 chr2 36863595 36863992 -213823862 + L1MC4 LINE L1 6660 7085 -957 1961 225 60 13 chr2 36864034 36864629 -213823225 + L1MC4 LINE L1 7275 7897 -145 310 286 54 81 chr2 36864731 36864916 -213822938 - MIR SINE MIR -26 236 57 329 242 0 0 chr2 36865085 36865151 -213822703 - MIR SINE MIR -144 118 53 537 271 220 5 chr2 36865540 36865754 -213822100 + MIR SINE MIR 3 262 0 316 308 216 30 chr2 36865754 36866193 -213821661 - L2 LINE L2 -647 2667 2147 537 282 38 19 chr2 36867898 36868111 -213819743 + MIR SINE MIR 22 238 -24 201 241 0 69 chr2 36869192 36869308 -213818546 + T-rich Low_complexity Low_complexity 2 109 0 193 319 96 64 chr2 36870662 36870819 -213817035 - MIR SINE MIR -89 173 12 207 0 0 0 chr2 36871491 36871514 -213816340 + (A)n Simple_repeat Simple_repeat 1 23 0 349 232 20 0 chr2 36873934 36874033 -213813821 - L1ME4a LINE L1 -35 6086 5986 765 33 0 0 chr2 36874034 36874126 -213813728 + (CATATA)n Simple_repeat Simple_repeat 5 96 0 340 291 109 6 chr2 36874251 36874416 -213813438 - L1ME4a LINE L1 -399 5722 5541 203 267 13 27 chr2 36876623 36876698 -213811156 + GA-rich Low_complexity Low_complexity 1 74 0 347 272 0 0 chr2 36877686 36877767 -213810087 + MER96 DNA MER1_type? 1 81 -94 220 196 87 0 chr2 36878068 36878114 -213809740 + MIR3 SINE MIR 133 182 -26 1848 163 10 3 chr2 36878564 36878852 -213809002 - AluJb SINE Alu -11 301 12 3119 159 18 5 chr2 36879082 36880034 -213807820 - L1MA5A LINE L1 -462 5835 4872 422 125 10 87 chr2 36880135 36880239 -213807615 - L1MA5A LINE L1 -1688 4458 4363 211 250 0 33 chr2 36880284 36880344 -213807510 + L2 LINE L2 3212 3269 -3 2074 141 36 33 chr2 36880354 36880717 -213807137 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr2 36881136 36881165 -213806689 + AT_rich Low_complexity Low_complexity 1 29 0 7548 38 1 0 chr2 36882916 36884566 -213803288 - L1PA4 LINE L1 -11 6144 4467 344 289 0 0 chr2 36884700 36884790 -213803064 + L1MC4 LINE L1 6614 6703 -1339 387 246 0 3 chr2 36884790 36885403 -213802451 + (TA)n Simple_repeat Simple_repeat 1 610 0 295 267 0 0 chr2 36885414 36885687 -213802167 + (TA)n Simple_repeat Simple_repeat 1 273 0 294 266 0 0 chr2 36885702 36885879 -213801975 + (TA)n Simple_repeat Simple_repeat 1 177 0 219 283 0 0 chr2 36885894 36886071 -213801783 + (TA)n Simple_repeat Simple_repeat 1 177 0 387 246 0 0 chr2 36886096 36886275 -213801579 + (TA)n Simple_repeat Simple_repeat 1 179 0 207 256 0 0 chr2 36886286 36886403 -213801451 + (TA)n Simple_repeat Simple_repeat 1 117 0 387 237 0 0 chr2 36886418 36886595 -213801259 + (TA)n Simple_repeat Simple_repeat 1 177 0 7380 28 2 2 chr2 36887904 36889471 -213798383 - L1PA4 LINE L1 -11 6144 4568 28906 32 19 1 chr2 36889572 36894782 -213793072 - L1P LINE L1 -813 5333 1 307 246 189 0 chr2 36894804 36894926 -213792928 + L1ME4a LINE L1 5904 6048 -73 2376 221 58 39 chr2 36895253 36896031 -213791823 - L1MC4a LINE L1 -392 7416 6624 420 295 35 12 chr2 36896509 36896682 -213791172 - L1MCc LINE L1 -6224 199 23 6317 155 10 10 chr2 36896728 36897927 -213789927 - L1P LINE L1 -2546 3600 2402 983 179 167 58 chr2 36897940 36898270 -213789584 - LTR18B LTR ERVL -248 366 1 4585 259 62 13 chr2 36898270 36899714 -213788140 - L1PA12 LINE L1 -6063 1518 5 339 240 6 101 chr2 36901356 36901535 -213786319 - MER112 DNA MER1_type -6 254 93 280 333 74 39 chr2 36902284 36902542 -213785312 + L2 LINE L2 2709 2975 -339 297 285 215 0 chr2 36902938 36903063 -213784791 + MIR SINE MIR 105 258 0 498 122 0 24 chr2 36903063 36903145 -213784709 - MADE1 DNA Mariner 0 80 1 572 263 17 23 chr2 36903563 36903738 -213784116 + MIR3 SINE MIR 28 201 -7 808 279 184 2 chr2 36903798 36904210 -213783644 - LTR33 LTR ERVL -24 497 11 2314 75 6 43 chr2 36905635 36905957 -213781897 + AluSx SINE Alu 3 312 0 2305 99 7 0 chr2 36906144 36906447 -213781407 - AluY SINE Alu -6 305 1 436 265 66 30 chr2 36907317 36907483 -213780371 - MER20B DNA MER1_type -611 172 1 244 333 119 0 chr2 36908092 36908176 -213779678 + L2 LINE L2 3169 3262 -10 208 315 123 0 chr2 36909410 36909540 -213778314 + MIR SINE MIR 117 262 0 233 408 8 8 chr2 36909902 36910022 -213777832 + MIR SINE MIR 20 139 -123 472 127 13 0 chr2 36910192 36910271 -213777583 + MADE1 DNA Mariner 1 80 0 308 343 41 18 chr2 36910306 36910475 -213777379 + MIR3 SINE MIR 31 203 -5 2075 175 117 47 chr2 36910548 36910680 -213777174 - L1MD3 LINE L1 -10 7985 7864 2534 190 32 48 chr2 36910680 36911243 -213776611 + MLT2B3 LTR ERVL 1 554 0 2075 175 117 47 chr2 36911243 36911658 -213776196 - L1MD3 LINE L1 -131 7864 7400 440 204 11 0 chr2 36911660 36911753 -213776101 - MLT1F1 LTR MaLR -448 119 26 654 270 109 15 chr2 36912283 36912550 -213775304 + MLT1J2 LTR MaLR 155 446 -4 476 191 0 38 chr2 36913248 36913353 -213774501 + MLT1F1 LTR MaLR 24 124 -443 1407 129 4 9 chr2 36913358 36913583 -213774271 + L1MD3 LINE L1 7407 7630 -365 561 211 81 0 chr2 36914828 36914951 -213772903 + MER94 DNA DNA 2 134 0 181 250 0 0 chr2 36915072 36915112 -213772742 + MIR SINE MIR 1 40 -222 670 292 50 5 chr2 36915173 36915392 -213772462 + MIR SINE MIR 31 259 -3 300 284 84 52 chr2 36916303 36916458 -213771396 - MIR SINE MIR -7 255 96 2336 71 0 7 chr2 36917052 36917338 -213770516 + AluY SINE Alu 1 286 -25 225 0 0 0 chr2 36917338 36917363 -213770491 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 318 284 118 0 chr2 36917376 36917503 -213770351 - MIR SINE MIR -1 261 120 495 333 56 4 chr2 36917639 36917873 -213769981 - MIR SINE MIR -12 250 5 21 57 0 0 chr2 36918130 36918165 -213769689 + AT_rich Low_complexity Low_complexity 1 35 0 1571 223 17 11 chr2 36918255 36918614 -213769240 + MLT1A1 LTR MaLR 5 365 0 2492 88 23 0 chr2 36918673 36919024 -213768830 - L1PA11 LINE L1 0 6174 5816 511 320 87 55 chr2 36919141 36919736 -213768118 - L1MEd LINE L1 -987 1503 806 758 232 12 6 chr2 36920404 36920568 -213767286 + MER45A DNA AcHobo 7 171 -7 363 78 0 0 chr2 36921092 36921143 -213766711 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 0 0 0 chr2 36921422 36921445 -213766409 + AT_rich Low_complexity Low_complexity 1 23 0 516 281 13 20 chr2 36921937 36922090 -213765764 - MIR SINE MIR -109 153 2 992 230 79 7 chr2 36922147 36922438 -213765416 - MLT1A1 LTR MaLR 0 365 54 199 326 146 0 chr2 36922638 36922727 -213765127 + L2 LINE L2 3204 3305 -8 1477 118 151 0 chr2 36922735 36923028 -213764826 - AluSx SINE Alu 0 330 1 244 310 70 0 chr2 36923041 36923112 -213764742 + MIR3 SINE MIR 85 160 -48 347 313 66 6 chr2 36923112 36923278 -213764576 - MER5B DNA MER1_type 0 178 3 194 234 0 43 chr2 36923283 36923330 -213764524 + MER5A DNA MER1_type 2 46 -143 363 287 47 16 chr2 36924406 36924535 -213763319 + MIR SINE MIR 56 188 -74 1253 181 15 5 chr2 36924557 36924762 -213763092 + AluJo SINE Alu 91 297 -15 2433 96 6 16 chr2 36924801 36925165 -213762689 - L1PB2 LINE L1 -9 6142 5783 1255 128 0 5 chr2 36925254 36925449 -213762405 - L1PA16 LINE L1 -9 6157 5964 597 221 97 41 chr2 36925564 36925759 -213762095 + MER63A DNA MER1_type 4 209 -1 364 283 54 73 chr2 36925954 36926159 -213761695 - MIR3 SINE MIR -7 201 1 4205 108 32 61 chr2 36926273 36927076 -213760778 + L1PA15 LINE L1 5386 6165 0 180 0 0 0 chr2 36927142 36927162 -213760692 + (T)n Simple_repeat Simple_repeat 1 20 0 27 29 0 0 chr2 36927365 36927399 -213760455 + AT_rich Low_complexity Low_complexity 1 34 0 2471 292 123 51 chr2 36927400 36929212 -213758642 - L2 LINE L2 -25 3288 1295 586 277 58 10 chr2 36929212 36929418 -213758436 - L2 LINE L2 -2552 762 547 216 184 0 0 chr2 36929507 36929556 -213758298 + (CA)n Simple_repeat Simple_repeat 2 50 0 201 266 32 82 chr2 36930025 36930037 -213757817 + L2 LINE L2 2163 2174 -1140 323 194 13 191 chr2 36930037 36930346 -213757508 - MER112 DNA MER1_type -2 254 1 201 266 32 82 chr2 36930346 36930491 -213757363 + L2 LINE L2 2174 2312 -1002 915 122 0 0 chr2 36930877 36931016 -213756838 - L1PA11 LINE L1 -1 6173 6035 195 293 17 0 chr2 36931098 36931156 -213756698 + L2 LINE L2 3212 3270 -2 320 241 78 78 chr2 36932582 36932698 -213755156 + MIR SINE MIR 1 116 -146 2255 120 0 0 chr2 36932747 36933048 -213754806 + AluSx SINE Alu 1 301 -11 282 233 27 14 chr2 36933067 36933140 -213754714 + L1MDa LINE L1 19 92 -6448 378 260 85 6 chr2 36933186 36933363 -213754491 + L1MB3 LINE L1 5121 5311 -835 1807 137 145 14 chr2 36933363 36933729 -213754125 - MSTA LTR MaLR 0 428 15 320 199 143 0 chr2 36933782 36933888 -213753966 + L1MD2 LINE L1 6194 7953 -42 21 0 0 0 chr2 36933926 36933947 -213753907 + AT_rich Low_complexity Low_complexity 1 21 0 313 272 54 0 chr2 36933960 36934052 -213753802 + MIR SINE MIR 140 236 -26 2171 169 44 108 chr2 36934602 36935213 -213752641 - L1MD3 LINE L1 -26 7969 7398 360 152 63 25 chr2 36935211 36935290 -213752564 - L1MC4 LINE L1 -1258 6784 6703 * 230 191 48 0 chr2 36935292 36935355 -213752499 + L1ME4a LINE L1 6025 6090 -31 514 194 24 8 chr2 36935366 36935490 -213752364 - MLT1D LTR MaLR -7 498 373 1207 115 6 17 chr2 36935492 36935666 -213752188 - AluSx SINE Alu -140 172 1 756 182 6 23 chr2 36935758 36935934 -213751920 + L1MA10 LINE L1 6160 6332 -2 432 264 114 33 chr2 36936443 36936716 -213751138 + L1MB3 LINE L1 5524 5818 -303 484 208 60 20 chr2 36936845 36936994 -213750860 + MER104 DNA Tc2 1 155 -25 449 286 94 79 chr2 36937933 36938412 -213749442 + MLT1J LTR MaLR 26 511 0 2522 73 0 0 chr2 36938573 36938875 -213748979 - AluSg SINE Alu -8 302 1 2424 88 0 0 chr2 36939397 36939693 -213748161 - AluSg SINE Alu -14 296 1 28 0 0 0 chr2 36940712 36940740 -213747114 + AT_rich Low_complexity Low_complexity 1 28 0 2272 88 14 0 chr2 36941193 36941490 -213746364 + AluY SINE Alu 1 301 -10 209 231 0 0 chr2 36942071 36942110 -213745744 + (TG)n Simple_repeat Simple_repeat 2 40 0 1423 169 24 14 chr2 36942129 36942425 -213745429 + L1MB3 LINE L1 5885 6183 0 196 331 49 25 chr2 36942478 36942641 -213745213 - L2 LINE L2 -534 2780 2614 333 42 21 0 chr2 36943511 36943559 -213744295 + L1PA3 LINE L1 6107 6155 0 183 42 0 0 chr2 36943618 36943642 -213744212 + (CA)n Simple_repeat Simple_repeat 1 24 0 239 240 40 30 chr2 36943909 36944009 -213743845 - L1ME LINE L1 -283 5881 5781 1873 135 14 27 chr2 36944840 36945136 -213742718 + AluJb SINE Alu 1 292 -20 920 244 54 27 chr2 36946649 36946944 -213740910 + L1ME1 LINE L1 5641 5943 -223 960 217 112 34 chr2 36947452 36947913 -213739941 + MLT1E LTR MaLR 1 593 0 347 344 96 0 chr2 36948463 36948588 -213739266 + L2 LINE L2 2920 3056 -257 207 322 34 42 chr2 36948732 36948850 -213739004 + L2 LINE L2 3196 3312 -1 195 175 75 0 chr2 36948897 36948937 -213738917 + MIR SINE MIR 33 75 -133 893 249 9 14 chr2 36951090 36951307 -213736547 + MER20B DNA MER1_type 4 219 0 378 272 44 4 chr2 36951728 36951883 -213735971 - MIR SINE MIR -34 228 4 344 339 9 9 chr2 36952256 36952368 -213735486 - L2 LINE L2 -1 3271 3160 2297 79 0 16 chr2 36952712 36953016 -213734838 + AluY SINE Alu 1 299 -12 8935 24 0 271 chr2 36955517 36957419 -213730435 + SVA Other Other 1 1386 0 254 88 0 0 chr2 36957526 36957560 -213730294 - MLT1C LTR MaLR 0 467 434 * 367 203 13 0 chr2 36957558 36957637 -213730217 - MLT1B LTR MaLR -277 113 34 529 322 23 0 chr2 36957901 36958075 -213729779 + MIR SINE MIR 14 191 -71 270 160 0 0 chr2 36958083 36958133 -213729721 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 192 40 0 0 chr2 36958133 36958158 -213729696 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 375 195 0 0 chr2 36958157 36958280 -213729574 + (TA)n Simple_repeat Simple_repeat 1 123 0 317 284 23 0 chr2 36958285 36958373 -213729481 + L1MC4 LINE L1 6614 6703 -1339 183 100 0 0 chr2 36958380 36958410 -213729444 + (TA)n Simple_repeat Simple_repeat 1 30 0 607 245 44 0 chr2 36958565 36958724 -213729130 + MER20B DNA MER1_type 36 201 -582 292 326 44 15 chr2 36958747 36958882 -213728972 + MER91C DNA MER1_type 2 140 0 583 209 50 22 chr2 36958883 36959065 -213728789 + MER20B DNA MER1_type 216 402 -381 834 242 92 64 chr2 36959066 36959459 -213728395 - LTR41 LTR ERVL -1 772 369 1224 230 26 4 chr2 36959462 36959732 -213728122 + AluJo SINE Alu 1 276 -36 201 39 0 0 chr2 36959739 36959765 -213728089 + (CA)n Simple_repeat Simple_repeat 2 27 0 364 268 6 76 chr2 36959765 36959922 -213727932 - LTR41 LTR ERVL -398 375 230 812 252 161 3 chr2 36959922 36960208 -213727646 - LTR41 LTR ERVL -442 331 1 525 233 161 33 chr2 36960217 36960474 -213727380 + MER20B DNA MER1_type 405 715 -68 2377 120 14 19 chr2 36960474 36960840 -213727014 - THE1B LTR MaLR 0 364 1 525 233 161 33 chr2 36960840 36960912 -213726942 + MER20B DNA MER1_type 715 776 -7 456 229 169 0 chr2 36960938 36961056 -213726798 - L2 LINE L2 -546 2768 2631 1091 275 126 7 chr2 36961057 36961461 -213726393 - LTR33 LTR ERVL -2 519 68 2386 101 0 0 chr2 36961575 36961883 -213725971 + AluSx SINE Alu 1 308 -4 2482 30 0 10 chr2 36962248 36962550 -213725304 + L1PA4 LINE L1 5855 6153 -2 217 341 185 15 chr2 36962612 36962747 -213725107 + L3 LINE CR1 1414 1571 -6 1863 199 25 32 chr2 36963167 36963599 -213724255 - MLT1D LTR MaLR -74 431 3 907 253 54 74 chr2 36963773 36963924 -213723930 + MLT1I LTR MaLR 3 155 -254 2357 102 0 0 chr2 36963924 36964227 -213723627 - AluSq SINE Alu -10 303 1 907 253 54 74 chr2 36964227 36964482 -213723372 + MLT1I LTR MaLR 155 401 -8 27 0 0 0 chr2 36966515 36966542 -213721312 + AT_rich Low_complexity Low_complexity 1 27 0 267 31 0 0 chr2 36966914 36966946 -213720908 + (TG)n Simple_repeat Simple_repeat 1 32 0 324 333 50 35 chr2 36967060 36967201 -213720653 + MIR3 SINE MIR 6 148 -60 282 336 53 15 chr2 36967480 36967611 -213720243 + L2 LINE L2 3124 3259 -13 425 287 9 9 chr2 36967804 36967919 -213719935 - L3b LINE CR1 -358 1225 1111 29 78 0 0 chr2 36968508 36968572 -213719282 + AT_rich Low_complexity Low_complexity 1 64 0 1139 108 76 16 chr2 36968575 36968760 -213719094 - L1PB1 LINE L1 -7 6144 5949 22 35 0 0 chr2 36969330 36969359 -213718495 + AT_rich Low_complexity Low_complexity 1 29 0 1543 248 11 36 chr2 36969374 36969842 -213718012 - MLT2B1 LTR ERVL -64 456 1 2816 155 83 8 chr2 36970419 36971314 -213716540 - L1MB7 LINE L1 -12 6172 5164 334 174 0 54 chr2 36971320 36971412 -213716442 - FLAM_A SINE Alu 0 133 47 300 130 3 32 chr2 36971412 36971493 -213716361 - L1MB7 LINE L1 -981 5165 5087 3514 247 70 5 chr2 36971500 36972428 -213715426 - L1M4b LINE L1 -5836 1023 36 285 226 16 0 chr2 36972703 36972765 -213715089 + Charlie8 DNA MER1_type 1366 1428 -989 24 0 0 0 chr2 36973048 36973072 -213714782 + AT_rich Low_complexity Low_complexity 1 24 0 374 330 144 5 chr2 36973894 36974082 -213713772 + MIR SINE MIR 23 236 -26 918 185 36 0 chr2 36974493 36974688 -213713166 + MER3 DNA MER1_type 1 202 -7 370 295 0 0 chr2 36976218 36976357 -213711497 + (TA)n Simple_repeat Simple_repeat 2 140 0 331 267 0 22 chr2 36976358 36976448 -213711406 - L1MC4 LINE L1 -1340 6702 6615 351 273 23 0 chr2 36976455 36976543 -213711311 - L1MC4 LINE L1 -1339 6703 6614 301 222 0 16 chr2 36976523 36976586 -213711268 - L1MCa LINE L1 -4359 1770 1709 * 1107 56 0 28 chr2 36976702 36976846 -213711008 - AluSg SINE Alu -170 140 1 563 331 98 80 chr2 36977168 36977446 -213710408 + L2 LINE L2 2181 2453 -861 4591 173 16 13 chr2 36977446 36978348 -213709506 - L1MC2 LINE L1 -9 6335 5432 563 331 98 80 chr2 36978348 36978766 -213709088 + L2 LINE L2 2453 2889 -425 23 54 0 0 chr2 36979077 36979114 -213708740 + AT_rich Low_complexity Low_complexity 1 37 0 257 304 0 0 chr2 36979115 36979184 -213708670 + L2 LINE L2 3242 3310 -3 2308 107 0 0 chr2 36979430 36979729 -213708125 - AluSc SINE Alu -10 299 1 28 0 0 0 chr2 36980089 36980117 -213707737 + AT_rich Low_complexity Low_complexity 1 28 0 314 345 72 72 chr2 36982111 36982627 -213705227 - L2 LINE L2 -541 2773 2258 1419 169 38 35 chr2 36984477 36984662 -213703192 - Charlie5 DNA MER1_type -4 2620 2437 1539 208 0 14 chr2 36984662 36984951 -213702903 - AluJo SINE Alu 0 312 28 1419 169 38 35 chr2 36984951 36985137 -213702717 - Charlie5 DNA MER1_type -187 2437 2248 21 0 0 0 chr2 36985816 36985837 -213702017 + AT_rich Low_complexity Low_complexity 1 21 0 361 250 33 22 chr2 36986150 36986242 -213701612 + MIR SINE MIR 13 105 -157 394 312 54 40 chr2 36986402 36986644 -213701210 + L2 LINE L2 2787 3032 -281 26545 40 2 1 chr2 36986745 36990544 -213697310 - L1P2 LINE L1 -401 5754 1955 323 308 60 34 chr2 36991662 36991779 -213696075 - L2 LINE L2 0 3272 3153 302 277 0 92 chr2 36991978 36992119 -213695735 - L1MCa LINE L1 -5130 989 862 488 330 104 56 chr2 36992198 36992592 -213695262 - L1MCa LINE L1 -5386 733 321 345 342 99 26 chr2 36992592 36992896 -213694958 + L2 LINE L2 2947 3272 -41 231 222 0 0 chr2 36993325 36993379 -213694475 + A-rich Low_complexity Low_complexity 1 54 0 298 175 120 66 chr2 36995455 36995582 -213692272 - MIR SINE MIR -83 179 39 345 24 0 0 chr2 36995876 36995918 -213691936 + (CA)n Simple_repeat Simple_repeat 1 42 0 437 189 11 0 chr2 36995947 36996042 -213691812 + CT-rich Low_complexity Low_complexity 2 97 0 841 75 5 54 chr2 36996046 36996232 -213691622 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 273 256 15 15 chr2 36996234 36996371 -213691483 + CT-rich Low_complexity Low_complexity 4 140 0 3084 58 20 0 chr2 36996577 36997019 -213690835 + L1PA7 LINE L1 5738 6187 0 183 80 0 0 chr2 36998178 36998203 -213689651 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 949 239 50 17 chr2 37000485 37000723 -213687131 + L1PA13 LINE L1 54 299 -6540 * 3684 235 27 24 chr2 37000706 37001759 -213686095 + L1PA13 LINE L1 1668 2723 -4126 5594 121 12 18 chr2 37001784 37003130 -213684724 + L1PA15 LINE L1 4823 6164 -1 723 209 222 20 chr2 37003513 37003703 -213684151 - MLT1A2 LTR MaLR -19 355 205 186 43 0 0 chr2 37003703 37003726 -213684128 + (TTC)n Simple_repeat Simple_repeat 1 23 0 723 209 222 20 chr2 37003726 37003832 -213684022 - MLT1A2 LTR MaLR -169 205 15 2065 128 60 23 chr2 37004142 37004493 -213683361 + THE1B LTR MaLR 1 364 0 185 358 0 12 chr2 37004541 37004622 -213683232 + L2 LINE L2 3234 3313 0 804 190 50 0 chr2 37004628 37004828 -213683026 - L1MC3 LINE L1 -1 7784 7575 793 154 109 17 chr2 37004831 37004974 -213682880 - L1MA9 LINE L1 -1 6311 6148 396 0 0 0 chr2 37004974 37005018 -213682836 + (TG)n Simple_repeat Simple_repeat 1 44 0 793 154 109 17 chr2 37005018 37005049 -213682805 - L1MA9 LINE L1 -164 6148 6121 663 160 0 46 chr2 37005089 37005220 -213682634 + L1MA9 LINE L1 6004 6128 -184 1987 134 3 3 chr2 37005230 37005522 -213682332 - AluSg SINE Alu -16 294 3 3161 178 16 16 chr2 37005526 37006165 -213681689 - L1MC3 LINE L1 -199 7586 6948 316 244 23 35 chr2 37006379 37006465 -213681389 - MIR3 SINE MIR -15 193 109 346 332 207 26 chr2 37006668 37007330 -213680524 - L2 LINE L2 -601 2713 1932 2065 125 0 26 chr2 37009961 37010272 -213677582 - AluSx SINE Alu -3 309 7 509 148 0 10 chr2 37011229 37011330 -213676524 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 273 310 23 0 chr2 37011739 37011826 -213676028 - MIR SINE MIR -65 197 109 7980 200 78 77 chr2 37012865 37014823 -213673031 + L1MC3 LINE L1 5169 7217 -568 296 264 11 22 chr2 37014823 37014914 -213672940 + MLT1F1 LTR MaLR 35 124 -443 7980 200 78 77 chr2 37014914 37015484 -213672370 + L1MC3 LINE L1 7217 7785 0 2878 133 2 0 chr2 37015737 37016172 -213671682 - L1PA16 LINE L1 -17 6149 5714 21 0 0 0 chr2 37016711 37016732 -213671122 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr2 37017480 37017523 -213670331 + AT_rich Low_complexity Low_complexity 1 43 0 667 286 16 22 chr2 37018413 37018598 -213669256 - MIR SINE MIR -42 220 37 248 225 0 0 chr2 37018675 37018746 -213669108 + A-rich Low_complexity Low_complexity 3 73 0 449 247 224 12 chr2 37019099 37019269 -213668585 - L2 LINE L2 -5 3308 3103 2148 186 56 34 chr2 37019269 37019737 -213668117 + MLT2B1 LTR ERVL 1 478 -42 210 191 0 0 chr2 37019737 37019784 -213668070 + (CCTA)n Simple_repeat Simple_repeat 1 47 0 515 67 27 0 chr2 37019790 37019865 -213667989 + (TCCA)n Simple_repeat Simple_repeat 4 80 0 1367 191 66 0 chr2 37019912 37020168 -213667686 + AluJo SINE Alu 1 273 -39 453 19 0 0 chr2 37020176 37020230 -213667624 + (CA)n Simple_repeat Simple_repeat 1 54 0 2032 265 80 52 chr2 37020291 37021205 -213666649 - L2 LINE L2 -870 2444 1506 333 244 267 15 chr2 37021732 37021867 -213665987 + MIR3 SINE MIR 16 184 -24 26 0 0 0 chr2 37022439 37022465 -213665389 + AT_rich Low_complexity Low_complexity 1 26 0 763 297 26 0 chr2 37022796 37022991 -213664863 + MIR SINE MIR 59 258 -4 249 33 0 0 chr2 37023014 37023044 -213664810 + (ATG)n Simple_repeat Simple_repeat 3 32 0 637 294 75 14 chr2 37023134 37023413 -213664441 - MER102a DNA MER1_type -1 329 34 3624 121 28 31 chr2 37023561 37024197 -213663657 + L1MA7 LINE L1 5656 6289 -2 811 244 21 4 chr2 37024200 37024434 -213663420 - L1M4 LINE L1 -3273 2873 2636 199 297 88 33 chr2 37025620 37025711 -213662143 + L2 LINE L2 3210 3305 -8 237 224 0 35 chr2 37026038 37026096 -213661758 - MER96B DNA MER1_type? -325 92 37 198 0 0 0 chr2 37026336 37026358 -213661496 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1198 163 10 5 chr2 37026576 37026772 -213661082 - AluJo SINE Alu -60 252 56 309 103 0 0 chr2 37026816 37026855 -213660999 - AluJo SINE Alu -251 51 13 325 260 81 49 chr2 37027628 37027751 -213660103 + MIR SINE MIR 16 142 -66 217 333 0 0 chr2 37028025 37028088 -213659766 + CT-rich Low_complexity Low_complexity 4 66 0 2157 104 0 13 chr2 37028228 37028526 -213659328 - AluSq SINE Alu -17 296 3 2661 128 34 18 chr2 37028545 37029045 -213658809 - L1MA4 LINE L1 -6 6294 5787 1237 189 24 12 chr2 37029056 37029304 -213658550 - MLT1A1 LTR MaLR -112 253 3 311 234 47 55 chr2 37029304 37029432 -213658422 - L1MEd LINE L1 -3201 2928 2802 906 196 0 0 chr2 37029432 37029590 -213658264 - AluJb SINE Alu -11 301 144 1211 286 77 19 chr2 37029591 37029947 -213657907 - L1MEd LINE L1 -3320 2809 2475 2313 112 0 0 chr2 37029947 37030243 -213657611 - AluSq SINE Alu -17 296 1 1211 286 77 19 chr2 37030243 37030564 -213657290 - L1MEd LINE L1 -3654 2475 2093 6859 126 54 19 chr2 37030578 37031767 -213656087 - Tigger3b DNA MER2_type 0 1231 1 192 77 0 0 chr2 37031927 37031953 -213655901 + (TATG)n Simple_repeat Simple_repeat 3 28 0 541 306 54 51 chr2 37032301 37033290 -213654564 - L1MEd LINE L1 -4741 1388 561 2197 84 3 14 chr2 37034373 37034669 -213653185 - AluSg SINE Alu -17 293 1 511 323 44 13 chr2 37034983 37035212 -213652642 + L2 LINE L2 2174 2409 -905 1353 237 22 37 chr2 37035269 37035679 -213652175 - L1MC2 LINE L1 -9 6335 5932 471 184 0 0 chr2 37035780 37035921 -213651933 + (TA)n Simple_repeat Simple_repeat 2 142 0 195 69 0 0 chr2 37035926 37035955 -213651899 + (TC)n Simple_repeat Simple_repeat 2 30 0 270 160 0 0 chr2 37035955 37036005 -213651849 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 526 322 23 0 chr2 37036013 37036187 -213651667 - MIR SINE MIR -71 191 14 394 203 13 0 chr2 37036451 37036530 -213651324 + MLT1B LTR MaLR 34 113 -277 265 88 0 0 chr2 37036528 37036562 -213651292 + MLT1C LTR MaLR 434 467 0 * 6659 93 32 37 chr2 37036669 37037874 -213649980 - SVA Other Other -683 1386 382 544 189 33 25 chr2 37037991 37038113 -213649741 + L2 LINE L2 3189 3311 -2 198 330 54 27 chr2 37038417 37038529 -213649325 - MIR SINE MIR -50 212 98 2094 105 10 3 chr2 37038669 37038965 -213648889 + AluY SINE Alu 1 298 -13 305 289 253 5 chr2 37039497 37039687 -213648167 - MIR SINE MIR -16 246 10 208 280 0 0 chr2 37040199 37040249 -213647605 - L2 LINE L2 -1 3271 3222 250 343 118 0 chr2 37041141 37041243 -213646611 + MER91A DNA MER1_type 1 114 -82 21 36 0 0 chr2 37041457 37041485 -213646369 + AT_rich Low_complexity Low_complexity 1 28 0 34 24 0 0 chr2 37041787 37041828 -213646026 + AT_rich Low_complexity Low_complexity 1 41 0 505 269 104 22 chr2 37041870 37042052 -213645802 + MIR3 SINE MIR 1 197 -11 5415 174 29 15 chr2 37042560 37044025 -213643829 - L1MA9 LINE L1 0 7731 6242 3264 230 61 33 chr2 37044008 37044113 -213643741 - L1MA9 LINE L1 -3122 4443 4342 * 2182 41 41 61 chr2 37044113 37044406 -213643448 - AluY SINE Alu -20 291 5 3264 230 61 33 chr2 37044406 37045905 -213641949 - L1MA9 LINE L1 -3223 4342 2781 532 286 28 113 chr2 37046654 37046937 -213640917 + L2 LINE L2 3014 3272 0 248 241 27 80 chr2 37049187 37049299 -213638555 + L3 LINE CR1 391 496 -1081 638 319 91 25 chr2 37049455 37049816 -213638038 - LTR16B LTR ERVL -4 446 37 261 0 0 0 chr2 37050168 37050197 -213637657 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1621 179 15 101 chr2 37050255 37050302 -213637552 + MLT1B LTR MaLR 6 55 -335 2150 120 0 0 chr2 37050302 37050612 -213637242 + AluSx SINE Alu 1 310 0 1621 179 15 101 chr2 37050612 37050971 -213636883 + MLT1B LTR MaLR 55 378 -12 239 241 103 0 chr2 37051026 37051084 -213636770 + LTR67 LTR ERVL 109 172 -385 14834 36 8 1 chr2 37051416 37053985 -213633869 + L1PA4 LINE L1 3579 6155 0 731 122 0 0 chr2 37054121 37054228 -213633626 - AluSc SINE Alu -18 291 185 622 120 0 0 chr2 37054227 37054319 -213633535 - AluS SINE Alu -220 92 1 * 381 93 0 0 chr2 37054495 37054549 -213633305 + (CA)n Simple_repeat Simple_repeat 2 55 0 1887 131 4 0 chr2 37054549 37054823 -213633031 - AluSx SINE Alu -35 277 3 536 330 80 24 chr2 37055060 37055396 -213632458 + L3 LINE CR1 510 864 -713 201 243 0 0 chr2 37055506 37055543 -213632311 + (TG)n Simple_repeat Simple_repeat 2 38 0 573 358 156 7 chr2 37055793 37056223 -213631631 + L3 LINE CR1 1009 1502 -75 852 257 132 19 chr2 37056332 37056643 -213631211 - MLT1C LTR MaLR 0 467 122 629 200 110 50 chr2 37056623 37056823 -213631031 - MLT1C LTR MaLR -250 217 6 * 889 229 62 45 chr2 37057744 37057849 -213630005 + MLT1B LTR MaLR 6 108 -282 1883 181 0 0 chr2 37057849 37058147 -213629707 + AluSx SINE Alu 3 300 -12 889 229 62 45 chr2 37058147 37058488 -213629366 + MLT1B LTR MaLR 108 388 -2 551 248 129 50 chr2 37058490 37058897 -213628957 + MLT1D LTR MaLR 37 467 0 232 343 76 29 chr2 37059714 37059819 -213628035 - L2 LINE L2 -13 3259 3150 213 39 0 0 chr2 37060019 37060045 -213627809 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 69 0 0 chr2 37060045 37060074 -213627780 + (GA)n Simple_repeat Simple_repeat 2 30 0 7305 223 35 30 chr2 37060398 37062134 -213625720 + L1MC1 LINE L1 3145 4897 -1249 1990 98 0 4 chr2 37062134 37062390 -213625464 + AluSx SINE Alu 44 298 -14 7305 223 35 30 chr2 37062390 37062826 -213625028 + L1MC1 LINE L1 4897 5329 -817 262 90 57 0 chr2 37062845 37062895 -213624959 + Alu SINE Alu 254 291 -11 5182 165 17 2 chr2 37062903 37063822 -213624032 + L1MC1 LINE L1 5325 6257 -76 2279 142 28 16 chr2 37063829 37064082 -213623772 + L1MB2 LINE L1 5742 6003 -168 1991 158 12 54 chr2 37064082 37064487 -213623367 - MLT1B LTR MaLR 0 390 3 2279 142 28 16 chr2 37064487 37064656 -213623198 + L1MB2 LINE L1 6003 6169 -2 427 284 10 36 chr2 37064699 37064893 -213622961 + L1MC/D LINE L1 1387 1575 -4965 1034 169 0 0 chr2 37064925 37065108 -213622746 + L1MA4A LINE L1 6059 6241 -62 257 218 13 0 chr2 37065150 37065228 -213622626 + L1MA4A LINE L1 6225 6303 0 3660 241 50 35 chr2 37065239 37065749 -213622105 + L1MC/D LINE L1 4149 4650 -1890 306 0 0 0 chr2 37065749 37065783 -213622071 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 3660 241 50 35 chr2 37065783 37066506 -213621348 + L1MC/D LINE L1 4650 5401 -1139 1338 150 24 12 chr2 37066513 37066766 -213621088 + L1MC/D LINE L1 5699 5954 -799 222 37 0 0 chr2 37066927 37066954 -213620900 + (CATA)n Simple_repeat Simple_repeat 2 28 0 29 28 0 0 chr2 37066969 37067005 -213620849 + AT_rich Low_complexity Low_complexity 1 36 0 33 43 0 0 chr2 37067120 37067167 -213620687 + AT_rich Low_complexity Low_complexity 1 47 0 602 251 54 18 chr2 37068678 37068845 -213619009 + MER63A DNA MER1_type 38 210 0 200 244 0 0 chr2 37068865 37068906 -213618948 - L2 LINE L2 -7 3306 3266 2240 116 0 0 chr2 37069465 37069766 -213618088 - AluSx SINE Alu -11 301 1 534 182 146 73 chr2 37070720 37070912 -213616942 - L1MA10 LINE L1 -22 6312 6107 206 366 67 43 chr2 37072858 37073022 -213614832 - L2 LINE L2 -1 3271 3104 225 0 0 0 chr2 37073069 37073094 -213614760 + (CA)n Simple_repeat Simple_repeat 1 25 0 438 308 97 11 chr2 37074180 37074369 -213613485 - MIR SINE MIR -17 245 40 2065 135 39 39 chr2 37074405 37074769 -213613085 - THE1B LTR MaLR 0 364 1 342 0 0 0 chr2 37075860 37075898 -213611956 + (CA)n Simple_repeat Simple_repeat 2 39 0 238 386 79 16 chr2 37076824 37076951 -213610903 - L2 LINE L2 0 3272 3138 182 358 123 0 chr2 37077728 37077809 -213610045 - L2 LINE L2 -9 3263 3173 3175 125 17 23 chr2 37079111 37079575 -213608279 - L1PB4 LINE L1 -7 6149 5687 2232 113 7 0 chr2 37079575 37079884 -213607970 - AluSq SINE Alu -2 311 1 3175 125 17 23 chr2 37079884 37079947 -213607907 - L1PB4 LINE L1 -469 5687 5625 215 245 0 0 chr2 37081352 37081401 -213606453 - L3b LINE CR1 -241 1342 1294 216 371 28 28 chr2 37082198 37082341 -213605513 - MER5A DNA MER1_type 0 189 47 219 114 0 0 chr2 37082503 37082538 -213605316 + (CA)n Simple_repeat Simple_repeat 1 35 0 1338 216 24 27 chr2 37082542 37082871 -213604983 + L1MC4 LINE L1 5362 5689 -2119 1028 40 0 0 chr2 37083302 37083428 -213604426 - L1PA5 LINE L1 -6 6148 6023 24 0 0 0 chr2 37083562 37083586 -213604268 + AT_rich Low_complexity Low_complexity 1 24 0 3259 158 113 5 chr2 37083715 37084378 -213603476 - L1MA8 LINE L1 -2 6289 5555 364 244 47 0 chr2 37084498 37084584 -213603270 + L1MC4 LINE L1 6614 6703 -1339 345 300 0 0 chr2 37084522 37084612 -213603242 - L1MC4 LINE L1 -1339 6703 6614 * 317 299 34 54 chr2 37085344 37085491 -213602363 + MER5B DNA MER1_type 1 144 -34 243 263 0 0 chr2 37087741 37087798 -213600056 - L2 LINE L2 0 3313 3257 564 283 69 0 chr2 37087896 37088069 -213599785 + MER5A DNA MER1_type 2 186 -3 287 309 55 27 chr2 37089171 37089281 -213598573 + L2 LINE L2 3200 3312 -1 2054 127 7 10 chr2 37089336 37089636 -213598218 - AluSx SINE Alu -13 299 1 22 35 0 0 chr2 37090206 37090235 -213597619 + AT_rich Low_complexity Low_complexity 1 29 0 5684 114 19 2 chr2 37090345 37091651 -213596203 - L1PA16 LINE L1 -10 6156 4883 997 290 234 15 chr2 37091708 37092587 -213595267 + L2 LINE L2 2163 3309 -4 287 260 80 0 chr2 37092888 37092988 -213594866 - L1ME LINE L1 -468 5653 5546 662 136 8 0 chr2 37093234 37093352 -213594502 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 237 310 212 18 chr2 37094174 37094287 -213593567 + MIR3 SINE MIR 8 142 -66 264 314 114 83 chr2 37096140 37096404 -213591450 + L2 LINE L2 2999 3270 -2 471 35 0 0 chr2 37096810 37096852 -213591002 + (CA)n Simple_repeat Simple_repeat 1 99 0 471 35 0 0 chr2 37096852 37096909 -213590945 + (CA)n Simple_repeat Simple_repeat 2 58 0 729 217 0 7 chr2 37096931 37097069 -213590785 - FRAM SINE Alu -29 147 11 519 330 61 57 chr2 37098518 37098976 -213588878 + L2 LINE L2 2375 2834 -480 460 277 14 35 chr2 37099450 37099591 -213588263 + MER5A DNA MER1_type 49 186 -3 362 324 39 100 chr2 37099595 37099956 -213587898 - L2 LINE L2 -1157 2157 1819 226 341 15 0 chr2 37099956 37100088 -213587766 + L1ME LINE L1 5725 5858 -304 35 63 0 0 chr2 37100152 37100215 -213587639 + AT_rich Low_complexity Low_complexity 1 63 0 1370 128 32 4 chr2 37100264 37100515 -213587339 + L1MA7 LINE L1 6034 6291 0 2920 259 37 60 chr2 37100681 37101745 -213586109 + L1M4 LINE L1 4 1042 -5817 1532 212 45 67 chr2 37101753 37102466 -213585388 + L1M4 LINE L1 1150 1858 -4997 1623 214 55 2 chr2 37102466 37102923 -213584931 + L1M4 LINE L1 5551 6031 -926 1201 132 59 14 chr2 37102923 37103142 -213584712 - Tigger1 DNA MER2_type -2188 230 2 618 240 35 6 chr2 37103152 37103323 -213584531 - MIR SINE MIR -42 220 45 196 268 70 28 chr2 37106243 37106314 -213581540 + MIR SINE MIR 51 124 -138 21 0 0 0 chr2 37106903 37106924 -213580930 + AT_rich Low_complexity Low_complexity 1 21 0 1894 147 0 36 chr2 37107485 37107792 -213580062 + AluJb SINE Alu 1 296 -16 199 268 18 0 chr2 37108399 37108455 -213579399 + L2 LINE L2 3216 3272 0 194 250 0 0 chr2 37108566 37108606 -213579248 - L2 LINE L2 0 3272 3233 448 359 80 44 chr2 37108614 37108979 -213578875 - L2 LINE L2 -18 3295 2918 873 195 96 53 chr2 37109130 37109412 -213578442 - L1ME1 LINE L1 -41 6125 5832 2813 143 24 44 chr2 37109479 37110026 -213577828 + L1MA9 LINE L1 5482 6017 -295 28 0 0 0 chr2 37110026 37110054 -213577800 + AT_rich Low_complexity Low_complexity 1 28 0 3687 150 5 5 chr2 37110087 37110692 -213577162 + MER6A DNA MER2_type 1 605 0 582 268 153 78 chr2 37110692 37111077 -213576777 - L2 LINE L2 -1031 2283 1870 2127 145 18 33 chr2 37111087 37111481 -213576373 + L1MC1 LINE L1 5927 6314 -19 1651 216 42 85 chr2 37112077 37112620 -213575234 - MLT2B1 LTR ERVL 0 520 1 2058 166 13 3 chr2 37113346 37113964 -213573890 + L1MC/D LINE L1 4978 5602 -731 4340 144 24 53 chr2 37113973 37114985 -213572869 + MER11C LTR ERVK 1 1071 0 668 157 0 9 chr2 37114985 37115100 -213572754 + L1MC/D LINE L1 5610 5723 -610 2340 118 8 30 chr2 37115100 37115472 -213572382 - THE1B LTR MaLR 0 364 1 2880 65 43 2 chr2 37115472 37115869 -213571985 - THE1B-int LTR MaLR 0 1580 1168 457 115 0 0 chr2 37115870 37115931 -213571923 - AluSg/x SINE Alu -125 187 127 779 168 0 0 chr2 37115932 37116057 -213571797 - AluJo/FLAM SINE Alu -177 125 1 1226 198 80 0 chr2 37116748 37117011 -213570843 + L2 LINE L2 2258 2541 -773 1715 322 63 10 chr2 37117091 37118175 -213569679 - HERV16 LTR ERVL -1665 3989 2796 1175 214 18 59 chr2 37118176 37118613 -213569241 + MLT2B1 LTR ERVL 1 413 -1 3526 90 14 0 chr2 37118763 37119251 -213568603 - L1PA13 LINE L1 -19 6144 5650 533 309 34 19 chr2 37119406 37119726 -213568128 - HERV16 LTR ERVL -3762 1234 910 405 197 211 136 chr2 37120836 37121064 -213566790 + MIR SINE MIR 15 259 -3 220 410 63 9 chr2 37122030 37122252 -213565602 + MIR SINE MIR 5 238 -24 699 237 73 16 chr2 37124599 37124813 -213563041 - MIR SINE MIR -4 258 30 749 137 60 60 chr2 37126767 37126950 -213560904 + MER53 DNA DNA 1 183 -6 537 259 49 60 chr2 37127017 37127096 -213560758 + MER5A DNA MER1_type 1 79 -110 1760 185 34 0 chr2 37127096 37127393 -213560461 + AluJb SINE Alu 1 307 -5 1803 154 32 29 chr2 37127393 37127704 -213560150 + AluSx SINE Alu 1 312 0 537 259 49 60 chr2 37127704 37127808 -213560046 + MER5A DNA MER1_type 77 183 -6 513 201 345 0 chr2 37128758 37128952 -213558902 + MIR SINE MIR 2 262 0 373 309 11 53 chr2 37129087 37129275 -213558579 - MER5A DNA MER1_type -2 187 8 534 267 112 5 chr2 37129471 37129658 -213558196 - MIR SINE MIR 0 262 56 467 284 20 76 chr2 37129699 37129896 -213557958 - MER5A DNA MER1_type 0 189 4 500 229 0 134 chr2 37130747 37130948 -213556906 + MIR SINE MIR 87 260 -2 2131 135 140 8 chr2 37131015 37131393 -213556461 - MSTA LTR MaLR 0 428 1 666 189 144 0 chr2 37132386 37132539 -213555315 + MER63A DNA MER1_type 36 210 0 371 321 47 70 chr2 37132675 37132890 -213554964 + HAL1 LINE L1 1 210 -2297 193 313 35 97 chr2 37133014 37133158 -213554696 + L3 LINE CR1 1421 1555 -22 251 258 83 53 chr2 37133527 37133605 -213554249 - L2 LINE L2 -3 3310 3225 1655 163 39 20 chr2 37133605 37133911 -213553943 + AluJo SINE Alu 1 312 0 251 258 83 53 chr2 37133911 37133964 -213553890 - L2 LINE L2 -88 3225 3175 308 130 0 0 chr2 37134714 37134768 -213553086 + MER53 DNA DNA 29 82 -107 783 288 58 4 chr2 37134887 37134948 -213552906 + L2 LINE L2 3021 3077 -236 1933 123 13 40 chr2 37134948 37135249 -213552605 + AluSx SINE Alu 1 293 -19 783 288 58 4 chr2 37135249 37135465 -213552389 + L2 LINE L2 3077 3313 0 1961 136 58 17 chr2 37135915 37136275 -213551579 - THE1C LTR MaLR 0 375 1 226 222 0 0 chr2 37137003 37137048 -213550806 + GA-rich Low_complexity Low_complexity 1 45 0 1887 110 0 101 chr2 37137109 37137436 -213550418 + AluSx SINE Alu 1 294 -18 418 229 0 0 chr2 37137537 37137620 -213550234 + L2 LINE L2 3231 3313 0 2527 49 0 10 chr2 37138706 37139012 -213548842 + AluY SINE Alu 1 303 -8 346 274 35 44 chr2 37139013 37139126 -213548728 - L2 LINE L2 -19 3253 3142 21 36 0 0 chr2 37141469 37141497 -213546357 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 37141831 37141853 -213546001 + (CA)n Simple_repeat Simple_repeat 2 23 0 646 238 0 0 chr2 37142078 37142204 -213545650 + FLAM_C SINE Alu 1 126 -7 628 258 57 57 chr2 37142368 37142597 -213545257 - MER21B LTR ERV1 -362 501 273 420 291 28 50 chr2 37142667 37142808 -213545046 + L2 LINE L2 3127 3264 -8 22 0 0 0 chr2 37142811 37142833 -213545021 + AT_rich Low_complexity Low_complexity 1 22 0 236 367 33 0 chr2 37143103 37143193 -213544661 + MIR SINE MIR 58 150 -58 14904 170 29 10 chr2 37143209 37143892 -213543962 + L1P LINE L1 805 1474 -4672 2076 127 7 0 chr2 37143892 37144183 -213543671 + AluSg SINE Alu 1 293 -17 14904 170 29 10 chr2 37144183 37147267 -213540587 + L1P LINE L1 1474 4628 -1518 * 23348 96 7 15 chr2 37147266 37150842 -213537012 - L1P LINE L1 -2590 3556 11 793 120 73 7 chr2 37150849 37150999 -213536855 - MLT1A1 LTR MaLR -205 160 1 364 322 187 12 chr2 37152087 37152485 -213535369 - L2 LINE L2 -187 3085 2595 2220 110 30 0 chr2 37152489 37152788 -213535066 + AluSc SINE Alu 1 308 -1 666 328 96 37 chr2 37153146 37153603 -213534251 + L3 LINE CR1 1064 1547 -30 653 171 0 83 chr2 37154426 37154533 -213533321 + L1MA4 LINE L1 6124 6212 -88 2465 71 0 6 chr2 37154533 37154844 -213533010 + AluY SINE Alu 1 309 -2 653 171 0 83 chr2 37154844 37154917 -213532937 + L1MA4 LINE L1 6212 6289 -11 281 288 32 8 chr2 37155417 37155542 -213532312 + L1MB7 LINE L1 5520 5647 -665 431 196 26 0 chr2 37155748 37155901 -213531953 + (TA)n Simple_repeat Simple_repeat 1 157 0 23 33 0 0 chr2 37156035 37156065 -213531789 + AT_rich Low_complexity Low_complexity 1 30 0 7092 100 6 15 chr2 37158028 37159095 -213528759 + MER11C LTR ERVK 1 1057 -14 304 44 0 22 chr2 37159623 37159668 -213528186 + L1PA16 LINE L1 6109 6152 -14 23 0 0 0 chr2 37159901 37159924 -213527930 + AT_rich Low_complexity Low_complexity 1 23 0 351 0 0 0 chr2 37160835 37160874 -213526980 + (TG)n Simple_repeat Simple_repeat 2 40 0 7957 228 31 9 chr2 37161399 37163748 -213524106 + L1M4 LINE L1 2458 4859 -1287 901 179 21 16 chr2 37163761 37163951 -213523903 + L1MB7 LINE L1 5936 6126 -58 207 69 0 0 chr2 37163958 37163987 -213523867 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 207 333 111 12 chr2 37164008 37164179 -213523675 + L2 LINE L2 3122 3309 -4 211 254 16 16 chr2 37164642 37164705 -213523149 - L2 LINE L2 0 3313 3251 243 197 49 0 chr2 37165319 37165380 -213522474 + L1M4 LINE L1 4727 4790 -1356 698 210 36 30 chr2 37165816 37165983 -213521871 + MER5A DNA MER1_type 15 182 -7 483 320 81 72 chr2 37166371 37166998 -213520856 + L2 LINE L2 2638 3268 -4 3787 169 33 33 chr2 37167538 37167868 -213519986 - MER44D DNA MER2_type -1882 605 401 2249 104 16 0 chr2 37167868 37168175 -213519679 - AluSq SINE Alu -1 312 1 3787 169 33 33 chr2 37168175 37168577 -213519277 - MER44D DNA MER2_type -2085 402 1 219 244 0 0 chr2 37168657 37168702 -213519152 - MER91B DNA MER1_type -127 63 19 1505 269 27 48 chr2 37168800 37169440 -213518414 + MER20B DNA MER1_type 51 676 -107 282 160 10 20 chr2 37169474 37169574 -213518280 + (TA)n Simple_repeat Simple_repeat 1 99 0 344 202 77 10 chr2 37169602 37169706 -213518148 + MER20B DNA MER1_type 668 778 -5 521 244 9 0 chr2 37169909 37170024 -213517830 - Tigger7 DNA MER2_type -616 117 2 677 143 0 0 chr2 37170128 37170251 -213517603 - AluSg/x SINE Alu 0 307 185 526 348 119 26 chr2 37170269 37170723 -213517131 - L2 LINE L2 -1 3312 2817 366 123 0 0 chr2 37170808 37170865 -213516989 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 290 382 65 0 chr2 37171063 37171186 -213516668 - L2 LINE L2 -3 3269 3139 345 47 0 0 chr2 37171334 37171377 -213516477 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 189 74 0 0 chr2 37171377 37171404 -213516450 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 674 311 27 0 chr2 37171475 37171658 -213516196 + MIR SINE MIR 10 197 -65 350 310 26 39 chr2 37171663 37171905 -213515949 - MLT1H LTR MaLR 0 549 312 269 68 23 0 chr2 37172142 37172186 -213515668 + (TA)n Simple_repeat Simple_repeat 1 45 0 208 237 34 51 chr2 37172195 37172254 -213515600 + MIR SINE MIR 205 262 0 662 330 53 4 chr2 37172513 37172740 -213515114 + MIR SINE MIR 25 262 0 709 186 27 66 chr2 37172779 37172962 -213514892 - MER5B DNA MER1_type 0 178 3 513 276 58 13 chr2 37172969 37173125 -213514729 - MIR3 SINE MIR -26 182 20 306 153 59 0 chr2 37173474 37173559 -213514295 + CT-rich Low_complexity Low_complexity 4 93 0 215 301 71 26 chr2 37174530 37174643 -213513211 - L3 LINE CR1 -875 702 585 309 308 76 17 chr2 37175614 37175851 -213512003 - L1ME4a LINE L1 -198 5923 5673 1371 175 32 20 chr2 37175858 37176109 -213511745 - AluJo SINE Alu -58 254 1 551 292 40 25 chr2 37176186 37176475 -213511379 - L1ME4a LINE L1 -526 5595 5346 334 209 39 78 chr2 37176628 37176781 -213511073 + MARNA DNA Mariner 415 561 -25 867 303 4 0 chr2 37176788 37177022 -213510832 + MIR SINE MIR 18 252 -10 2145 129 3 0 chr2 37177086 37177435 -213510419 - AluSq SINE Alu 0 313 1 2486 40 7 0 chr2 37177443 37177740 -213510114 - AluY SINE Alu -12 299 1 486 40 0 53 chr2 37177962 37178037 -213509817 - L1PA16 LINE L1 -1 6165 6095 209 359 68 44 chr2 37178419 37178625 -213509229 + MIR SINE MIR 47 257 -5 1379 149 0 5 chr2 37179052 37179260 -213508594 + AluJb SINE Alu 1 207 -105 819 117 17 28 chr2 37179267 37179446 -213508408 + GA-rich Low_complexity Low_complexity 4 180 0 272 155 0 17 chr2 37179441 37179499 -213508355 + G-rich Low_complexity Low_complexity 5 61 0 * 292 262 28 56 chr2 37179836 37179943 -213507911 + MIR3 SINE MIR 98 201 -7 347 294 31 37 chr2 37180375 37180538 -213507316 - MER104 DNA Tc2 -18 162 1 235 250 0 0 chr2 37180759 37180811 -213507043 - MIR SINE MIR -9 253 202 196 26 26 53 chr2 37180811 37180849 -213507005 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 2239 115 0 13 chr2 37182540 37182845 -213505009 - AluSx SINE Alu -11 301 1 848 259 86 43 chr2 37182884 37183281 -213504573 - MLT1J2 LTR MaLR -18 432 19 425 301 71 29 chr2 37183389 37183628 -213504226 - MARNA DNA Mariner -55 531 283 21 36 0 0 chr2 37184271 37184299 -213503555 + AT_rich Low_complexity Low_complexity 1 28 0 352 270 62 66 chr2 37184415 37184656 -213503198 + L1ME4a LINE L1 5562 5801 -320 301 228 31 99 chr2 37184765 37184927 -213502927 + L1ME4a LINE L1 5949 6099 -22 432 266 145 28 chr2 37184961 37185026 -213502828 + MIR SINE MIR 21 77 -185 1296 204 36 22 chr2 37185026 37185300 -213502554 - AluJb SINE Alu -30 282 5 432 266 145 28 chr2 37185300 37185448 -213502406 + MIR SINE MIR 77 259 -3 437 300 15 93 chr2 37185625 37185895 -213501959 + MIR SINE MIR 14 262 0 288 297 89 0 chr2 37186176 37186277 -213501577 - MIR SINE MIR -71 191 82 270 0 0 0 chr2 37186278 37186308 -213501546 + (GA)n Simple_repeat Simple_repeat 2 31 0 216 0 0 0 chr2 37186307 37186331 -213501523 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 203 79 26 0 chr2 37187125 37187163 -213500691 + (CCCCCA)n Simple_repeat Simple_repeat 3 41 0 2316 99 0 40 chr2 37188446 37188770 -213499084 - AluSx SINE Alu -1 311 1 290 256 22 44 chr2 37188830 37188920 -213498934 - L3 LINE CR1 -6 1571 1484 362 291 141 85 chr2 37190208 37190440 -213497414 - L1M2 LINE L1 -5701 1148 931 192 40 0 0 chr2 37190440 37190465 -213497389 + (AGGGGG)n Simple_repeat Simple_repeat 6 30 0 362 291 141 85 chr2 37190465 37190798 -213497056 - L1M2 LINE L1 -5918 931 551 324 275 99 112 chr2 37190872 37191356 -213496498 - L1M2 LINE L1 -5844 1005 528 22 0 0 0 chr2 37191781 37191803 -213496051 + GC_rich Low_complexity Low_complexity 1 22 0 2199 124 0 7 chr2 37197752 37198058 -213489796 + AluSx SINE Alu 1 304 -8 342 265 86 28 chr2 37198066 37198210 -213489644 + MIR SINE MIR 91 247 -15 506 242 181 0 chr2 37198946 37199095 -213488759 - MER5A DNA MER1_type -2 187 12 410 329 40 28 chr2 37199446 37199645 -213488209 + MIR SINE MIR 4 202 -60 203 263 0 18 chr2 37199647 37199704 -213488150 + (TATG)n Simple_repeat Simple_repeat 1 56 0 29 0 0 0 chr2 37199725 37199754 -213488100 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 37200093 37200115 -213487739 + AT_rich Low_complexity Low_complexity 1 22 0 2206 97 21 0 chr2 37200573 37200862 -213486992 - AluSc SINE Alu -14 295 1 230 271 23 47 chr2 37202239 37202368 -213485486 + MIR SINE MIR 41 166 -96 182 313 50 12 chr2 37202354 37202434 -213485420 + MIR3 SINE MIR 123 205 -3 * 22 0 0 0 chr2 37205036 37205058 -213482796 + AT_rich Low_complexity Low_complexity 1 22 0 225 255 0 0 chr2 37206231 37206278 -213481576 + L2 LINE L2 3263 3309 -4 652 256 83 33 chr2 37212269 37212511 -213475343 + MIR SINE MIR 9 262 0 183 305 49 24 chr2 37212504 37212586 -213475268 + L2 LINE L2 3186 3269 -3 * 234 281 0 0 chr2 37213026 37213083 -213474771 + L2 LINE L2 3216 3272 0 491 70 56 0 chr2 37213643 37213714 -213474140 - AluJ/FRAM SINE Alu -10 302 228 237 132 0 0 chr2 37214563 37214601 -213473253 + (T)n Simple_repeat Simple_repeat 1 38 0 181 308 55 33 chr2 37215617 37215708 -213472146 - MIR3 SINE MIR -8 200 108 1131 136 0 0 chr2 37216476 37216631 -213471223 + AluSg/x SINE Alu 136 290 -22 220 338 52 58 chr2 37218567 37218721 -213469133 - L2 LINE L2 -266 3047 2895 940 298 71 15 chr2 37218721 37219114 -213468740 - L2 LINE L2 -5 3308 2894 313 239 0 0 chr2 37220677 37220744 -213467110 + MIR SINE MIR 195 261 -1 22 56 0 0 chr2 37221116 37221152 -213466702 + AT_rich Low_complexity Low_complexity 1 36 0 220 341 96 15 chr2 37221431 37221566 -213466288 - L2 LINE L2 0 3313 3168 184 313 209 24 chr2 37221633 37221844 -213466010 - L2 LINE L2 -197 3075 2826 238 290 140 14 chr2 37222644 37222923 -213464931 - L1M4 LINE L1 -2922 3224 2911 21 0 0 0 chr2 37223211 37223232 -213464622 + AT_rich Low_complexity Low_complexity 1 21 0 340 353 72 13 chr2 37223307 37223460 -213464394 - MIR3 SINE MIR -6 202 41 2009 146 7 0 chr2 37225645 37225946 -213461908 - AluSx SINE Alu -9 303 1 2469 65 7 3 chr2 37225955 37226264 -213461590 - AluY SINE Alu -1 310 1 1413 206 26 88 chr2 37226492 37226944 -213460910 + Charlie1a DNA MER1_type 1 424 -1031 254 300 40 20 chr2 37226944 37227044 -213460810 - L2 LINE L2 -971 2343 2242 257 209 15 0 chr2 37228303 37228370 -213459484 + (TA)n Simple_repeat Simple_repeat 2 69 0 445 323 118 33 chr2 37228453 37228946 -213458908 - L2 LINE L2 -181 3091 2549 223 270 20 20 chr2 37229388 37229488 -213458366 + (TATATG)n Simple_repeat Simple_repeat 6 105 0 1869 158 45 0 chr2 37229847 37230138 -213457716 - AluSx SINE Alu -8 304 1 1455 174 70 11 chr2 37230776 37231046 -213456808 - AluJo SINE Alu -26 286 1 182 200 0 0 chr2 37232315 37232350 -213455504 + MIR SINE MIR 48 82 -126 220 222 0 95 chr2 37232659 37232722 -213455132 - L3b LINE CR1 -3 1580 1524 210 375 85 48 chr2 37233886 37234403 -213453451 - L2 LINE L2 -384 2930 2395 401 318 70 5 chr2 37234403 37234604 -213453250 - L2 LINE L2 -1528 1786 1573 1753 295 173 22 chr2 37234617 37235714 -213452140 - L2 LINE L2 -1905 1409 147 273 319 0 0 chr2 37236660 37236729 -213451125 - L2 LINE L2 -5 3308 3240 984 319 141 18 chr2 37236976 37237738 -213450116 - L2 LINE L2 -129 3184 2329 332 251 137 34 chr2 37238591 37238766 -213449088 - L2 LINE L2 -896 2418 2226 222 222 0 0 chr2 37239376 37239421 -213448433 - L2 LINE L2 0 3272 3228 283 274 77 17 chr2 37240330 37240447 -213447407 - MER5A DNA MER1_type -57 132 9 219 329 0 0 chr2 37242053 37242126 -213445728 + (TA)n Simple_repeat Simple_repeat 1 73 0 22 0 0 0 chr2 37244145 37244167 -213443687 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 37246499 37246522 -213441332 + (TG)n Simple_repeat Simple_repeat 2 24 0 951 289 109 44 chr2 37249247 37250080 -213437774 - L2 LINE L2 0 3272 2370 2089 130 0 0 chr2 37250762 37251070 -213436784 + AluSx SINE Alu 1 308 0 240 289 91 64 chr2 37252891 37253078 -213434776 - L2 LINE L2 -1511 1803 1612 1547 174 67 0 chr2 37253141 37253423 -213434431 - AluJb SINE Alu -11 301 1 247 264 59 18 chr2 37253629 37253752 -213434102 + MIR SINE MIR 49 176 -32 450 281 251 15 chr2 37255082 37255281 -213432573 - MIR SINE MIR -2 260 15 186 296 19 0 chr2 37255493 37255547 -213432307 - L2 LINE L2 -251 3021 2967 1065 294 30 11 chr2 37256662 37257029 -213430825 - MARNA DNA Mariner -165 421 48 446 229 131 44 chr2 37258604 37258787 -213429067 - MIR SINE MIR 0 262 64 231 361 48 0 chr2 37258894 37258977 -213428877 - L2 LINE L2 -30 3242 3156 261 326 41 10 chr2 37259160 37259258 -213428596 + L2 LINE L2 3161 3261 -11 490 96 0 48 chr2 37259625 37259708 -213428146 + L1MA4 LINE L1 6190 6268 -32 296 307 80 13 chr2 37259782 37259932 -213427922 - MIR3 SINE MIR -24 184 25 2423 103 0 0 chr2 37261757 37262067 -213425787 + AluSg SINE Alu 1 310 0 193 200 0 108 chr2 37262153 37262218 -213425636 + L3 LINE CR1 1345 1402 -175 280 292 22 11 chr2 37263040 37263129 -213424725 + MIR SINE MIR 41 130 -78 410 237 143 40 chr2 37263652 37263913 -213423941 + MLT1J LTR MaLR 1 249 -160 447 256 160 0 chr2 37264519 37264644 -213423210 + MER5A DNA MER1_type 2 146 -43 21 0 0 0 chr2 37267206 37267227 -213420627 + AT_rich Low_complexity Low_complexity 1 21 0 654 218 11 73 chr2 37267588 37267767 -213420087 - MER5B DNA MER1_type -9 169 2 933 202 17 6 chr2 37267781 37267959 -213419895 - MER5A DNA MER1_type -6 183 4 527 164 14 57 chr2 37268009 37268124 -213419730 - MER5A DNA MER1_type -77 112 4 931 232 0 17 chr2 37268388 37268569 -213419285 - MER5B DNA MER1_type 0 178 1 399 254 107 13 chr2 37269273 37269471 -213418383 + MIR SINE MIR 28 245 -17 259 377 39 0 chr2 37269659 37269789 -213418065 + L2 LINE L2 2921 3055 -258 183 42 0 0 chr2 37270167 37270191 -213417663 + (TG)n Simple_repeat Simple_repeat 1 24 0 646 89 0 0 chr2 37270434 37270513 -213417341 + MADE1 DNA Mariner 1 79 -1 2371 72 0 0 chr2 37271930 37272222 -213415632 + AluY SINE Alu 1 292 -19 231 309 29 29 chr2 37272224 37272360 -213415494 + L1M4 LINE L1 3643 3778 -2368 2304 110 0 0 chr2 37272688 37272989 -213414865 + AluSc SINE Alu 1 301 -8 553 248 87 7 chr2 37273644 37273793 -213414061 + MIR SINE MIR 20 180 -82 851 254 118 48 chr2 37274285 37274794 -213413060 + L2 LINE L2 2763 3298 -15 451 296 99 14 chr2 37274962 37275104 -213412750 + MIR3 SINE MIR 30 183 -25 204 125 0 0 chr2 37277064 37277096 -213410758 + (T)n Simple_repeat Simple_repeat 1 32 0 608 295 81 19 chr2 37279085 37279343 -213408511 + L3 LINE CR1 1302 1575 -2 189 273 18 0 chr2 37281179 37281234 -213406620 - L2 LINE L2 0 3313 3258 21 0 0 0 chr2 37282068 37282089 -213405765 + AT_rich Low_complexity Low_complexity 1 21 0 329 248 133 40 chr2 37282218 37282400 -213405454 - MLT1H LTR MaLR 0 549 404 575 256 39 6 chr2 37282425 37282605 -213405249 - MLT1F1 LTR MaLR -378 189 4 187 366 70 0 chr2 37288270 37288341 -213399513 + L2 LINE L2 3148 3223 -49 316 357 95 58 chr2 37288438 37288732 -213399122 - L2 LINE L2 -12 3260 2956 189 371 14 0 chr2 37289071 37289141 -213398713 + L2 LINE L2 2904 2974 -298 198 71 0 0 chr2 37289205 37289233 -213398621 + (CA)n Simple_repeat Simple_repeat 1 28 0 183 383 0 17 chr2 37289362 37289422 -213398432 - L2 LINE L2 -2127 1187 1129 362 288 93 0 chr2 37289447 37289565 -213398289 + Charlie8 DNA MER1_type 26 154 -2263 211 325 136 35 chr2 37289726 37290095 -213397759 - L2 LINE L2 -2199 1115 710 728 291 42 17 chr2 37290144 37290385 -213397469 - MIR SINE MIR -3 259 13 214 294 93 48 chr2 37290438 37290707 -213397147 - L2 LINE L2 -2803 511 231 186 71 0 0 chr2 37291962 37291990 -213395864 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 863 95 35 0 chr2 37291993 37292109 -213395745 - L1PB1 LINE L1 -1 6150 6031 275 336 71 0 chr2 37293622 37293735 -213394119 - MIR3 SINE MIR -5 203 83 251 319 37 15 chr2 37294004 37294139 -213393715 - MER5A DNA MER1_type -1 188 51 * 317 280 25 45 chr2 37294021 37294178 -213393676 + MER5A DNA MER1_type 36 189 0 22 0 0 0 chr2 37294204 37294226 -213393628 + AT_rich Low_complexity Low_complexity 1 22 0 1831 132 22 4 chr2 37295122 37295395 -213392459 + L1MB7 LINE L1 5897 6174 -10 281 156 65 26 chr2 37296627 37296704 -213391150 + MER116 DNA Mariner 1 80 0 593 221 0 0 chr2 37297078 37297191 -213390663 + L1PB4 LINE L1 6031 6143 -13 507 285 19 32 chr2 37300500 37300658 -213387196 + MIR SINE MIR 2 157 -105 2382 77 0 3 chr2 37300723 37301022 -213386832 - AluY SINE Alu -13 298 1 316 344 72 0 chr2 37301420 37301545 -213386309 + L2 LINE L2 3133 3266 -6 251 293 0 0 chr2 37302200 37302275 -213385579 + (TA)n Simple_repeat Simple_repeat 2 76 0 8929 103 59 19 chr2 37305109 37306458 -213381396 + Tigger1 DNA MER2_type 893 2307 -111 1160 86 215 0 chr2 37306458 37306563 -213381291 + MER30 DNA MER1_type 1 82 -148 306 0 0 0 chr2 37306563 37306597 -213381257 + (CA)n Simple_repeat Simple_repeat 2 35 0 1160 86 215 0 chr2 37306597 37306677 -213381177 + MER30 DNA MER1_type 82 226 -4 8929 103 59 19 chr2 37306677 37306793 -213381061 + Tigger1 DNA MER2_type 2307 2417 -1 234 302 16 58 chr2 37307856 37307981 -213379873 + MIR SINE MIR 72 189 -67 5891 205 59 14 chr2 37308188 37309410 -213378444 - L1MB7 LINE L1 0 6184 5019 2038 126 34 7 chr2 37309410 37309703 -213378151 + AluSx SINE Alu 1 301 -11 5891 205 59 14 chr2 37309703 37310882 -213376972 - L1MB7 LINE L1 -1165 5019 3682 368 287 163 8 chr2 37311072 37311201 -213376653 + MIR SINE MIR 59 207 -55 183 156 0 0 chr2 37311540 37311572 -213376282 + T-rich Low_complexity Low_complexity 4 35 0 294 246 0 29 chr2 37312635 37312704 -213375150 - MIR SINE MIR -56 152 86 296 285 52 62 chr2 37316440 37316633 -213371221 - MIR SINE MIR -49 213 23 473 270 72 68 chr2 37318216 37318463 -213369391 - MIR SINE MIR -8 254 3 1032 288 50 30 chr2 37322139 37322643 -213365211 - MARNA DNA Mariner -30 556 43 384 297 30 6 chr2 37322500 37322665 -213365189 + MARNA DNA Mariner 397 565 -21 * 229 281 180 16 chr2 37325126 37325275 -213362579 - MIR SINE MIR -68 194 20 222 270 48 16 chr2 37326447 37326510 -213361344 - L2 LINE L2 -19 3294 3230 21 0 0 0 chr2 37326837 37326858 -213360996 + AT_rich Low_complexity Low_complexity 1 21 0 745 157 0 0 chr2 37327985 37328106 -213359748 + FLAM_C SINE Alu 23 143 0 22 35 0 0 chr2 37328685 37328714 -213359140 + AT_rich Low_complexity Low_complexity 1 29 0 201 108 0 0 chr2 37330296 37330333 -213357521 + (T)n Simple_repeat Simple_repeat 1 37 0 384 311 7 46 chr2 37332746 37332937 -213354917 + MIR3 SINE MIR 5 181 -61 670 298 83 5 chr2 37333100 37333318 -213354536 + MIR SINE MIR 4 238 -24 1359 305 156 48 chr2 37334493 37334881 -213352973 - L3 LINE CR1 -127 1450 1105 1549 197 0 17 chr2 37334881 37335175 -213352679 + AluJb SINE Alu 1 289 -23 1359 305 156 48 chr2 37335175 37336011 -213351843 - L3 LINE CR1 -472 1105 94 1934 168 0 10 chr2 37336273 37336583 -213351271 + AluJb SINE Alu 1 307 -5 225 381 0 0 chr2 37337361 37337445 -213350409 - L2 LINE L2 -1 3271 3188 695 236 52 48 chr2 37338055 37338284 -213349570 + MIR SINE MIR 4 233 -29 1745 174 3 14 chr2 37338716 37339010 -213348844 - AluJb SINE Alu -21 291 1 296 330 0 9 chr2 37339662 37339768 -213348086 + MIR3 SINE MIR 98 202 -6 1768 150 6 6 chr2 37340087 37340401 -213347453 - MER6 DNA MER2_type 0 865 552 * 3306 169 3 10 chr2 37340398 37340997 -213346857 - MER6 DNA MER2_type -57 808 214 198 0 0 0 chr2 37340997 37341019 -213346835 + (TC)n Simple_repeat Simple_repeat 1 22 0 1119 171 51 17 chr2 37341026 37341260 -213346594 - MER6 DNA MER2_type -623 242 1 1636 160 4 14 chr2 37341677 37341989 -213345865 - AluJo SINE Alu 0 317 9 189 308 111 26 chr2 37342262 37342379 -213345475 - L2 LINE L2 0 3272 3146 1787 148 7 43 chr2 37344076 37344380 -213343474 + AluSx SINE Alu 5 297 -15 1864 133 9 56 chr2 37345755 37346077 -213341777 - AluJb SINE Alu -5 307 1 195 69 0 0 chr2 37346682 37346711 -213341143 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 189 107 0 0 chr2 37346713 37346741 -213341113 + (TGGG)n Simple_repeat Simple_repeat 2 29 0 199 333 29 29 chr2 37348620 37348725 -213339129 + MIR3 SINE MIR 82 186 -22 198 206 0 0 chr2 37349650 37349684 -213338170 + L3 LINE CR1 1534 1567 -10 280 243 92 76 chr2 37351664 37351810 -213336044 + MIR SINE MIR 88 250 -12 2389 103 0 0 chr2 37357356 37357667 -213330187 + AluSx SINE Alu 1 311 -1 1369 120 5 0 chr2 37357792 37357983 -213329871 - AluSg/x SINE Alu -13 299 108 629 194 14 58 chr2 37358889 37359028 -213328826 + MER94 DNA DNA 1 133 -1 259 50 100 0 chr2 37359272 37359312 -213328542 - L1PA13 LINE L1 -1 6162 6119 36 40 0 0 chr2 37361976 37362026 -213325828 + AT_rich Low_complexity Low_complexity 1 50 0 23 33 0 0 chr2 37362231 37362261 -213325593 + AT_rich Low_complexity Low_complexity 1 30 0 418 282 62 48 chr2 37362724 37362933 -213324921 + MIR SINE MIR 9 220 -42 208 353 15 0 chr2 37365758 37365826 -213322028 + L2 LINE L2 3203 3271 -42 802 289 46 43 chr2 37366825 37367175 -213320679 - MARNA DNA Mariner -224 362 12 649 260 75 35 chr2 37367521 37367748 -213320106 + MIR SINE MIR 27 262 0 1537 174 27 54 chr2 37368153 37368447 -213319407 + AluJo SINE Alu 11 296 -16 591 162 15 49 chr2 37368773 37369240 -213318614 + GA-rich Low_complexity Low_complexity 1 451 0 538 145 31 49 chr2 37369255 37369584 -213318270 + GA-rich Low_complexity Low_complexity 1 323 0 634 171 28 17 chr2 37369916 37370092 -213317762 + GA-rich Low_complexity Low_complexity 2 179 0 1193 124 60 35 chr2 37370662 37370863 -213316991 - MER2 DNA MER2_type -139 206 1 2276 265 133 50 chr2 37373773 37375140 -213312714 - L2 LINE L2 -2 3311 1810 202 284 83 55 chr2 37375927 37376036 -213311818 + MIR SINE MIR 25 136 -72 268 251 123 16 chr2 37376230 37376352 -213311502 - MIR SINE MIR -60 148 40 368 270 110 0 chr2 37377041 37377141 -213310713 + L2 LINE L2 3159 3269 -3 304 270 120 30 chr2 37377695 37377795 -213310059 + MER5A DNA MER1_type 81 189 0 428 226 57 38 chr2 37377983 37378089 -213309765 + MIR SINE MIR 28 135 -127 296 217 83 0 chr2 37380201 37380261 -213307593 - L2 LINE L2 0 3313 3249 243 0 0 0 chr2 37381600 37381627 -213306227 + (T)n Simple_repeat Simple_repeat 1 27 0 189 402 36 9 chr2 37382724 37382836 -213305018 - L3 LINE CR1 -5 1572 1458 398 280 271 15 chr2 37382964 37383303 -213304551 - L3 LINE CR1 -159 1418 993 218 136 23 0 chr2 37384664 37384708 -213303146 + (TA)n Simple_repeat Simple_repeat 1 45 0 306 87 0 0 chr2 37384858 37384904 -213302950 + (TG)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr2 37385374 37385403 -213302451 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 37385726 37385751 -213302103 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 37386512 37386537 -213301317 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 37390616 37390651 -213297203 + AT_rich Low_complexity Low_complexity 1 35 0 866 254 9 14 chr2 37391386 37391599 -213296255 + MIR SINE MIR 30 241 -21 26 30 0 0 chr2 37391626 37391659 -213296195 + AT_rich Low_complexity Low_complexity 1 33 0 217 223 268 62 chr2 37392036 37392148 -213295706 + MIR3 SINE MIR 33 167 -41 25 31 0 0 chr2 37392190 37392222 -213295632 + AT_rich Low_complexity Low_complexity 1 32 0 536 223 0 16 chr2 37392692 37392813 -213295041 + L2 LINE L2 3195 3313 0 1266 183 144 49 chr2 37396742 37397206 -213290648 + Charlie1b DNA MER1_type 1 521 -2 28 29 0 0 chr2 37397640 37397675 -213290179 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 37398351 37398374 -213289480 + (A)n Simple_repeat Simple_repeat 1 23 0 274 196 18 0 chr2 37398941 37398997 -213288857 + MIR SINE MIR 202 258 -4 314 262 16 57 chr2 37399259 37399381 -213288473 - L2 LINE L2 -38 3275 3159 275 400 65 29 chr2 37399982 37400395 -213287459 + L2 LINE L2 2532 2959 -355 803 224 18 70 chr2 37400582 37400810 -213287044 - MER20 DNA MER1_type -3 216 1 1927 57 0 0 chr2 37400960 37401190 -213286664 + AluY SINE Alu 66 295 -16 491 306 67 6 chr2 37401542 37401722 -213286132 + MIR3 SINE MIR 14 204 -4 201 133 0 0 chr2 37401764 37401794 -213286060 + (CA)n Simple_repeat Simple_repeat 2 31 0 214 301 84 0 chr2 37401914 37401997 -213285857 + L2 LINE L2 3168 3257 -15 2438 80 0 0 chr2 37402316 37402616 -213285238 + AluSx SINE Alu 1 300 -12 255 338 0 0 chr2 37402986 37403060 -213284794 + G-rich Low_complexity Low_complexity 3 76 0 22 35 0 0 chr2 37403178 37403207 -213284647 + AT_rich Low_complexity Low_complexity 1 29 0 498 259 13 44 chr2 37403923 37404081 -213283773 + MIR SINE MIR 110 262 0 26 0 0 0 chr2 37404877 37404903 -213282951 + AT_rich Low_complexity Low_complexity 1 26 0 23 92 0 0 chr2 37405204 37405269 -213282585 + AT_rich Low_complexity Low_complexity 1 65 0 1985 161 26 23 chr2 37405382 37405729 -213282125 - MER7A DNA MER2_type 0 346 1 2017 111 21 0 chr2 37406215 37406503 -213281351 + AluSx SINE Alu 1 294 -18 2218 100 0 28 chr2 37406560 37406881 -213280973 + AluSx SINE Alu 1 312 0 1101 229 9 22 chr2 37407315 37407542 -213280312 - MER58A DNA MER1_type 0 224 1 187 383 149 7 chr2 37408387 37408528 -213279326 - L2 LINE L2 -8 3264 3104 290 220 0 0 chr2 37408903 37408962 -213278892 - L2 LINE L2 -974 2340 2282 509 246 16 91 chr2 37409847 37410034 -213277820 + L2 LINE L2 3081 3246 -67 1525 181 49 17 chr2 37410034 37410321 -213277533 - AluJo SINE Alu -12 300 5 509 246 16 91 chr2 37410321 37410385 -213277469 + L2 LINE L2 3246 3313 0 2444 76 0 3 chr2 37411106 37411407 -213276447 - AluSx SINE Alu -12 300 1 2359 75 14 0 chr2 37412098 37412390 -213275464 - AluSp SINE Alu -17 296 1 2294 143 87 3 chr2 37414203 37414594 -213273260 + MSTA LTR MaLR 1 424 -4 1994 137 63 6 chr2 37414685 37415020 -213272834 + MLT1B LTR MaLR 37 390 0 1169 118 39 49 chr2 37415539 37415707 -213272147 + MLT1B LTR MaLR 3 170 -220 2025 119 20 3 chr2 37415707 37416002 -213271852 + AluSq SINE Alu 1 300 -13 1169 118 39 49 chr2 37416002 37416037 -213271817 + MLT1B LTR MaLR 170 204 -186 23 0 0 0 chr2 37416784 37416807 -213271047 + AT_rich Low_complexity Low_complexity 1 23 0 1154 279 63 18 chr2 37418866 37419264 -213268590 + LTR33 LTR ERVL 37 452 -69 1916 239 137 56 chr2 37419878 37420901 -213266953 + HAL1 LINE L1 1394 2499 -8 21 57 0 0 chr2 37421151 37421186 -213266668 + AT_rich Low_complexity Low_complexity 1 35 0 1992 129 28 0 chr2 37421193 37421480 -213266374 + AluJb SINE Alu 5 299 -13 1612 155 7 25 chr2 37421507 37421784 -213266070 + AluJo SINE Alu 13 284 -28 2437 80 3 0 chr2 37422865 37423164 -213264690 - AluSx SINE Alu -12 300 1 1130 164 51 0 chr2 37423321 37423516 -213264338 + MER2 DNA MER2_type 1 205 -140 22 56 0 0 chr2 37423837 37423873 -213263981 + AT_rich Low_complexity Low_complexity 1 36 0 210 262 195 27 chr2 37423922 37424071 -213263783 - L2 LINE L2 0 3272 3099 568 335 11 6 chr2 37424172 37424348 -213263506 + L3 LINE CR1 1400 1576 -1 1898 107 85 0 chr2 37425233 37425504 -213262350 + AluSx SINE Alu 2 295 -17 770 219 6 6 chr2 37426113 37426277 -213261577 - MIR SINE MIR -27 235 72 224 365 83 22 chr2 37426556 37426737 -213261117 + MIR3 SINE MIR 3 194 -14 1030 51 0 0 chr2 37427111 37427228 -213260626 - L1PA10 LINE L1 -8 6160 6044 1706 148 6 35 chr2 37427364 37427681 -213260173 + AluJo SINE Alu 5 312 0 1472 78 10 0 chr2 37427929 37428122 -213259732 - THE1A LTR MaLR 0 355 161 7914 91 5 4 chr2 37428122 37429174 -213258680 - THE1A-int LTR MaLR -527 1053 1 3080 59 3 0 chr2 37429174 37429528 -213258326 - THE1A LTR MaLR 0 355 1 2958 126 52 2 chr2 37430017 37430461 -213257393 - MER1A DNA MER1_type -62 467 2 1464 177 3 41 chr2 37431306 37431600 -213256254 - AluJb SINE Alu -25 287 5 426 327 75 66 chr2 37432025 37432374 -213255480 + L2 LINE L2 2921 3272 0 305 285 115 79 chr2 37432634 37433134 -213254720 + L1M2 LINE L1 663 1162 -5687 203 274 97 0 chr2 37433479 37433541 -213254313 + MIR SINE MIR 191 258 -4 861 116 41 14 chr2 37433643 37433790 -213254064 + L1MB3 LINE L1 6033 6183 0 1029 116 0 0 chr2 37433798 37433936 -213253918 + AluSq/x SINE Alu 1 138 -175 1590 138 127 75 chr2 37433936 37434362 -213253492 + LTR7 LTR ERV1 1 448 -2 19391 102 37 11 chr2 37434364 37437276 -213250578 + HERVH LTR ERV1 1 2987 -4726 880 149 20 0 chr2 37437270 37437418 -213250436 + HERVH LTR ERV1 3140 3290 -4423 * 3451 102 6 6 chr2 37437408 37437910 -213249944 + HERVH LTR ERV1 3492 3993 -3720 4294 153 3 1 chr2 37437912 37438573 -213249281 + HERVH LTR ERV1 4488 5149 -2564 1409 129 18 5 chr2 37438574 37438791 -213249063 + HERVH LTR ERV1 5600 5819 -1894 * 2560 74 45 13 chr2 37438789 37439169 -213248685 + HERVH LTR ERV1 7322 7713 0 1695 144 110 65 chr2 37439169 37439598 -213248256 + LTR7 LTR ERV1 1 448 -2 1552 65 0 0 chr2 37439631 37439816 -213248038 - AluY SINE Alu -126 185 1 2316 181 20 13 chr2 37441842 37442235 -213245619 - MSTD LTR MaLR 0 396 1 997 166 18 12 chr2 37442583 37442746 -213245108 + FRAM SINE Alu 1 158 -18 2041 129 13 3 chr2 37443790 37444099 -213243755 + AluSx SINE Alu 1 312 0 1951 174 22 82 chr2 37444997 37445124 -213242730 + MLT1B LTR MaLR 1 134 -256 1884 115 6 88 chr2 37445124 37445464 -213242390 + AluSx SINE Alu 1 312 0 1951 174 22 82 chr2 37445464 37445751 -213242103 + MLT1B LTR MaLR 134 390 0 386 234 32 0 chr2 37449403 37449497 -213238357 + MER69 DNA AcHobo 1 97 -2429 645 218 34 0 chr2 37449501 37449648 -213238206 + MER69 DNA AcHobo 1941 2092 -434 2067 165 60 3 chr2 37449663 37450033 -213237821 - MER57A LTR ERV1 -3 400 10 549 209 45 8 chr2 37450564 37450698 -213237156 + MER69 DNA AcHobo 2118 2256 -270 789 141 0 16 chr2 37450704 37450825 -213237029 + AluJb SINE Alu 192 310 -2 2282 100 13 72 chr2 37450863 37451212 -213236642 - MER4E LTR ERV1 0 779 454 2184 109 7 13 chr2 37451212 37451515 -213236339 + AluSq SINE Alu 1 301 -12 2282 100 13 72 chr2 37451515 37451555 -213236299 - MER4E LTR ERV1 -325 454 413 3291 144 50 11 chr2 37451557 37452118 -213235736 - MER4D LTR ERV1 -320 583 1 827 202 121 9 chr2 37452118 37452340 -213235514 + MER69 DNA AcHobo 2279 2525 -1 2260 136 41 37 chr2 37452421 37452562 -213235292 - LTR23 LTR ERV1 0 437 298 2257 84 3 62 chr2 37452562 37452884 -213234970 - AluSp SINE Alu -10 303 1 2260 136 41 37 chr2 37452884 37453177 -213234677 - LTR23 LTR ERV1 -139 298 1 968 280 66 26 chr2 37453316 37453695 -213234159 + MLT1J2 LTR MaLR 45 438 -12 1813 119 85 58 chr2 37453895 37454223 -213233631 + MER1B DNA MER1_type 1 337 0 357 314 93 23 chr2 37454276 37454448 -213233406 + L3 LINE CR1 1377 1560 -17 2171 132 5 57 chr2 37454574 37454698 -213233156 + MSTC LTR MaLR 48 177 -251 2337 101 0 3 chr2 37454698 37455004 -213232850 + AluSx SINE Alu 2 306 -6 2171 132 5 57 chr2 37455004 37455281 -213232573 + MSTC LTR MaLR 177 428 0 206 234 0 21 chr2 37456347 37456394 -213231460 + GA-rich Low_complexity Low_complexity 1 46 0 621 226 48 12 chr2 37457395 37457563 -213230291 + MER58B DNA MER1_type 168 341 0 23 33 0 0 chr2 37457916 37457946 -213229908 + AT_rich Low_complexity Low_complexity 1 30 0 32 26 0 0 chr2 37458021 37458060 -213229794 + AT_rich Low_complexity Low_complexity 1 39 0 876 102 75 14 chr2 37458742 37458889 -213228965 + L1PA15 LINE L1 6004 6159 -6 323 256 125 22 chr2 37458905 37459100 -213228754 + L1M4 LINE L1 5209 5421 -756 1746 178 0 14 chr2 37459105 37459392 -213228462 + AluJo SINE Alu 11 293 -19 450 264 77 48 chr2 37459430 37459740 -213228114 - L1M4 LINE L1 -1095 5051 4733 2301 99 3 0 chr2 37459803 37460096 -213227758 - AluSg SINE Alu -16 294 1 1732 189 111 120 chr2 37460146 37460600 -213227254 - LTR8A LTR ERV1 -2 725 279 1190 21 0 0 chr2 37460600 37460740 -213227114 + L1PA2 LINE L1 6016 6155 0 1732 189 111 120 chr2 37460740 37461017 -213226837 - LTR8A LTR ERV1 -448 279 1 7263 170 83 45 chr2 37461019 37463147 -213224707 - HUERS-P1 LTR ERV1 -1 6262 3813 1267 191 0 9 chr2 37463165 37463385 -213224469 - AluJo SINE Alu -12 300 83 2801 135 2 22 chr2 37463385 37463882 -213223972 - HUERS-P1 LTR ERV1 -1614 3266 2780 3140 100 46 28 chr2 37463886 37464083 -213223771 + MER4B LTR ERV1 4 196 -583 2417 70 0 0 chr2 37464083 37464382 -213223472 + AluY SINE Alu 1 299 -12 3140 100 46 28 chr2 37464382 37464783 -213223071 + MER4B LTR ERV1 196 778 -1 2976 159 20 50 chr2 37464784 37465516 -213222338 - MER41-int LTR ERV1 -2654 3292 1843 267 140 20 0 chr2 37465566 37465616 -213222238 - MER34C LTR ERV1 -366 219 169 773 194 0 26 chr2 37465616 37465771 -213222083 - MER41-int LTR ERV1 -3225 2721 2571 2952 112 142 18 chr2 37465771 37466334 -213221520 + LTR10E LTR ERV1 1 633 0 4366 181 42 69 chr2 37466335 37467012 -213220842 - MER41-int LTR ERV1 -3439 2507 1813 2222 110 10 0 chr2 37467012 37467312 -213220542 - AluSx SINE Alu -9 303 1 4366 181 42 69 chr2 37467312 37468017 -213219837 - MER41-int LTR ERV1 -4133 1813 912 5387 116 22 14 chr2 37468017 37469507 -213218347 - L1PA16 LINE L1 -3 6163 4708 4366 181 42 69 chr2 37469507 37469649 -213218205 - MER41-int LTR ERV1 -5034 912 768 941 210 7 21 chr2 37469646 37469952 -213217902 - MER41-int LTR ERV1 -4466 1480 355 * 225 81 54 0 chr2 37469956 37469993 -213217861 - L1M4 LINE L1 -441 5733 5695 * 473 61 0 0 chr2 37469960 37470026 -213217828 - L1P4 LINE L1 -439 5727 5662 3472 214 50 43 chr2 37470029 37470980 -213216874 - MER41-int LTR ERV1 -4832 1431 474 1588 175 102 57 chr2 37471334 37471756 -213216098 - LTR8A LTR ERV1 0 727 287 14014 138 25 9 chr2 37471805 37473566 -213214288 + L1MA3 LINE L1 769 2579 -4986 3122 74 36 2 chr2 37473566 37474013 -213213841 + L1PA13 LINE L1 5696 6157 -6 14014 138 25 9 chr2 37474013 37474626 -213213228 + L1MA3 LINE L1 2579 3181 -4384 1321 201 25 11 chr2 37474634 37474908 -213212946 + AluJb SINE Alu 9 286 -26 15138 141 29 22 chr2 37474921 37475239 -213212615 + L1MA3 LINE L1 3168 3482 -4242 2155 113 17 10 chr2 37475239 37475541 -213212313 + AluSx SINE Alu 1 304 -8 15138 141 29 22 chr2 37475541 37475569 -213212285 + L1MA3 LINE L1 3482 3508 -4216 240 86 0 0 chr2 37475569 37475604 -213212250 + (CA)n Simple_repeat Simple_repeat 2 36 0 15138 141 29 22 chr2 37475604 37475958 -213211896 + L1MA3 LINE L1 3508 3858 -3866 408 55 0 0 chr2 37475958 37476013 -213211841 + (TA)n Simple_repeat Simple_repeat 1 55 0 15138 141 29 22 chr2 37476013 37477463 -213210391 + L1MA3 LINE L1 3858 5296 -2428 234 0 0 0 chr2 37477463 37477489 -213210365 + (CAA)n Simple_repeat Simple_repeat 2 27 0 15138 141 29 22 chr2 37477489 37479838 -213208016 + L1MA3 LINE L1 5296 7716 -8 461 211 55 45 chr2 37479840 37479999 -213207855 - LTR8 LTR ERV1 -387 154 1 269 170 0 0 chr2 37480040 37480087 -213207767 + L1ME LINE L1 5544 5590 -531 2473 34 20 7 chr2 37480370 37480664 -213207190 + AluY SINE Alu 1 298 -13 261 314 41 8 chr2 37480670 37480791 -213207063 - LTR33A LTR ERVL -102 421 297 255 267 156 0 chr2 37480928 37481018 -213206836 - LTR33A LTR ERVL -361 162 59 22 80 0 0 chr2 37481104 37481154 -213206700 + AT_rich Low_complexity Low_complexity 1 50 0 678 303 76 16 chr2 37481255 37481572 -213206282 + MLT1I LTR MaLR 74 409 0 725 188 23 0 chr2 37481770 37481903 -213205951 + Tigger3(Golem) DNA MER2_type 1 136 -2893 4634 133 50 12 chr2 37481913 37482747 -213205107 + Tigger3(Golem) DNA MER2_type 2163 3028 -1 223 197 79 26 chr2 37482750 37482826 -213205028 + MIR SINE MIR 183 262 0 2066 144 71 9 chr2 37483586 37483980 -213203874 - MSTB1 LTR MaLR -21 411 1 1956 137 7 13 chr2 37484011 37484340 -213203514 - AluSx SINE Alu 0 312 1 375 248 120 0 chr2 37485449 37485566 -213202288 - MIR SINE MIR -14 248 118 337 296 65 69 chr2 37485756 37485925 -213201929 + L1MC/D LINE L1 5556 5725 -2083 1626 187 3 38 chr2 37485925 37486241 -213201613 + AluJb SINE Alu 1 305 -7 337 296 65 69 chr2 37486241 37486331 -213201523 + L1MC/D LINE L1 5725 5814 -1994 466 365 108 8 chr2 37486860 37487230 -213200624 + HAL1b LINE L1 429 835 -513 2465 217 83 39 chr2 37487230 37488069 -213199785 + L1ME2 LINE L1 4992 5889 -275 1478 201 14 21 chr2 37488069 37488352 -213199502 + AluJo SINE Alu 21 301 -11 2465 217 83 39 chr2 37488352 37488631 -213199223 + L1ME2 LINE L1 5889 6154 -10 247 234 26 0 chr2 37488823 37488900 -213198954 + L1MC4 LINE L1 7963 8041 -1 453 305 16 56 chr2 37489204 37489453 -213198401 + L1M4 LINE L1 2154 2392 -3754 335 257 46 0 chr2 37489459 37489568 -213198286 + MER3 DNA MER1_type 43 156 -53 2268 101 0 22 chr2 37489933 37490250 -213197604 + AluSx SINE Alu 1 310 -2 1714 181 86 0 chr2 37492052 37492389 -213195465 - MER47A DNA MER2_type 0 366 1 244 242 16 16 chr2 37492928 37492990 -213194864 - L2 LINE L2 -1 3271 3210 495 243 52 37 chr2 37493451 37493587 -213194267 + MIR3 SINE MIR 33 170 -38 540 305 176 0 chr2 37493932 37494142 -213193712 - MIR SINE MIR -5 257 11 221 136 0 23 chr2 37494176 37494220 -213193634 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 28 61 0 0 chr2 37494249 37494298 -213193556 + AT_rich Low_complexity Low_complexity 1 49 0 3673 151 39 5 chr2 37495394 37496064 -213191790 - L1MB2 LINE L1 -39 6132 5440 1699 222 35 61 chr2 37496191 37496486 -213191368 + L1ME3 LINE L1 5587 5888 -274 1868 164 0 13 chr2 37496486 37496784 -213191070 + AluJb SINE Alu 1 294 -18 1699 222 35 61 chr2 37496784 37496823 -213191031 + L1ME3 LINE L1 5888 5926 -236 1713 156 51 27 chr2 37496823 37497157 -213190697 + MER2 DNA MER2_type 1 342 -2 1699 222 35 61 chr2 37497157 37497392 -213190462 + L1ME3 LINE L1 5926 6142 -20 204 40 0 0 chr2 37497494 37497519 -213190335 + (A)n Simple_repeat Simple_repeat 1 25 0 688 138 0 48 chr2 37497596 37497741 -213190113 + SVA Other Other 424 561 -825 1002 273 109 35 chr2 37498551 37499238 -213188616 + L2 LINE L2 2572 3303 -10 381 273 10 10 chr2 37499694 37499793 -213188061 + MER58 DNA MER1_type 1 99 -116 240 35 0 0 chr2 37499794 37499823 -213188031 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 353 192 27 0 chr2 37499829 37499902 -213187952 + MER58 DNA MER1_type 2346 2420 0 398 338 46 27 chr2 37500240 37500503 -213187351 + MLT1J LTR MaLR 1 268 -243 298 264 23 0 chr2 37500767 37500854 -213187000 - MER58C DNA MER1_type -10 205 117 337 148 30 1 chr2 37501036 37501105 -213186749 - MER58 DNA MER1_type -10 2410 2342 216 0 0 0 chr2 37501105 37501129 -213186725 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4502 147 28 33 chr2 37501215 37501463 -213186391 + L1MA9 LINE L1 5433 5681 -631 1653 149 36 29 chr2 37501463 37501738 -213186116 - AluJo SINE Alu -35 277 1 4502 147 28 33 chr2 37501738 37502227 -213185627 + L1MA9 LINE L1 5681 6168 -144 378 0 0 0 chr2 37502227 37502269 -213185585 + (CA)n Simple_repeat Simple_repeat 1 42 0 4502 147 28 33 chr2 37502269 37502409 -213185445 + L1MA9 LINE L1 6168 6307 -5 670 313 48 57 chr2 37502614 37503292 -213184562 - L2 LINE L2 -1 3271 2599 406 303 89 31 chr2 37503298 37503648 -213184206 - L1M4 LINE L1 -1300 4846 4477 2011 109 12 70 chr2 37503738 37504068 -213183786 - AluSx SINE Alu -1 311 1 201 39 0 0 chr2 37504570 37504596 -213183258 + (CA)n Simple_repeat Simple_repeat 2 27 0 230 366 36 36 chr2 37505106 37505327 -213182527 + L3 LINE CR1 57 277 -1300 222 327 131 0 chr2 37505818 37505925 -213181929 + L3 LINE CR1 1440 1560 -17 187 308 0 15 chr2 37505951 37506016 -213181838 - L2 LINE L2 -208 3064 3001 375 232 12 0 chr2 37506104 37506186 -213181668 + LTR67 LTR ERVL 453 535 -22 259 269 0 0 chr2 37507971 37508038 -213179816 - L3 LINE CR1 -346 1231 1165 1031 306 47 59 chr2 37509039 37509529 -213178325 - L1MEd LINE L1 -5513 606 123 481 254 104 6 chr2 37509662 37509835 -213178019 - L1ME LINE L1 -339 5782 5593 4623 150 21 11 chr2 37510226 37511026 -213176828 + L1MB7 LINE L1 5366 6173 -11 879 310 69 14 chr2 37512791 37513281 -213174573 - L2 LINE L2 -1080 2234 1718 966 121 34 0 chr2 37513281 37513430 -213174424 - L1MA4 LINE L1 -99 6201 6048 * 1058 288 76 53 chr2 37513417 37514429 -213173425 - L1MEc LINE L1 -4659 1602 564 2396 71 0 10 chr2 37514429 37514725 -213173129 - AluY SINE Alu -13 298 6 1058 288 76 53 chr2 37514725 37514766 -213173088 - L1MEc LINE L1 -5697 564 525 537 331 31 31 chr2 37514991 37515347 -213172507 - L1MEc LINE L1 -5619 451 96 5510 143 29 16 chr2 37515354 37516240 -213171614 - L1MC1 LINE L1 0 6333 5436 401 331 101 65 chr2 37517456 37518042 -213169812 - L2 LINE L2 0 3272 2591 1863 198 13 16 chr2 37518042 37518415 -213169439 + L1MB7 LINE L1 5794 6165 -19 1962 171 5 63 chr2 37518590 37518987 -213168867 - MLT1A2 LTR MaLR 0 374 1 643 295 87 0 chr2 37520192 37520420 -213167434 + MIR SINE MIR 15 261 -1 434 271 146 88 chr2 37520802 37521102 -213166752 - L1ME LINE L1 -448 5673 5341 237 33 0 0 chr2 37521102 37521132 -213166722 + (TG)n Simple_repeat Simple_repeat 2 31 0 434 271 146 88 chr2 37521132 37521225 -213166629 - L1ME LINE L1 -780 5341 5255 783 158 0 8 chr2 37521928 37522048 -213165806 + FLAM_C SINE Alu 12 130 -13 23 33 0 0 chr2 37522083 37522113 -213165741 + AT_rich Low_complexity Low_complexity 1 30 0 380 325 26 16 chr2 37522194 37522385 -213165469 - L1ME LINE L1 -2004 4142 3950 212 265 162 8 chr2 37522422 37522539 -213165315 - MIR SINE MIR -50 212 78 1018 245 15 8 chr2 37522655 37522916 -213164938 - L1MD3 LINE L1 -12 7983 7721 4215 124 86 91 chr2 37522916 37524304 -213163550 + pTR5 LTR ERV1 66 2438 0 3328 205 77 24 chr2 37524304 37525185 -213162669 - L1MC4 LINE L1 -410 7632 6705 288 0 0 0 chr2 37525186 37525218 -213162636 + (CA)n Simple_repeat Simple_repeat 2 33 0 486 327 0 0 chr2 37525228 37525393 -213162461 - L1M4 LINE L1 -1931 4215 4051 450 269 40 17 chr2 37525395 37525570 -213162284 - L1M4 LINE L1 -2028 4118 3940 234 250 88 70 chr2 37525933 37526185 -213161669 + L1MEc LINE L1 2125 2344 -3871 615 313 14 15 chr2 37526262 37526508 -213161346 + MLT1H LTR MaLR 81 314 -95 829 298 64 35 chr2 37528161 37528310 -213159544 - L2 LINE L2 -2 3311 3168 2415 61 0 0 chr2 37528310 37528605 -213159249 + AluY SINE Alu 1 295 -16 829 298 64 35 chr2 37528605 37528831 -213159023 - L2 LINE L2 -145 3168 2925 659 146 54 0 chr2 37529169 37529299 -213158555 - L1MB4 LINE L1 0 6180 6044 624 284 54 27 chr2 37529418 37529640 -213158214 + MIR SINE MIR 21 248 -14 2291 80 0 7 chr2 37529651 37529962 -213157892 - AluSx SINE Alu 0 310 2 180 0 0 0 chr2 37531473 37531493 -213156361 + (A)n Simple_repeat Simple_repeat 1 20 0 198 143 0 0 chr2 37531557 37531592 -213156262 + (TG)n Simple_repeat Simple_repeat 1 35 0 261 347 55 15 chr2 37533254 37533438 -213154416 + MIR SINE MIR 1 141 -67 2300 78 3 0 chr2 37533499 37533813 -213154041 + AluSq SINE Alu 1 315 0 299 291 87 0 chr2 37534044 37534147 -213153707 + MIR3 SINE MIR 93 204 -4 186 133 0 0 chr2 37534354 37534384 -213153470 + (TA)n Simple_repeat Simple_repeat 1 30 0 495 96 0 0 chr2 37534423 37534506 -213153348 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 491 260 0 0 chr2 37534694 37534829 -213153025 + MIR SINE MIR 50 183 -63 222 171 0 0 chr2 37535211 37535252 -213152602 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1681 176 22 0 chr2 37535297 37535575 -213152279 + AluJo SINE Alu 1 284 -28 207 0 0 0 chr2 37535578 37535601 -213152253 + (TAA)n Simple_repeat Simple_repeat 2 24 0 955 254 17 4 chr2 37535604 37535840 -213152014 - MIR SINE MIR -8 254 16 514 283 225 19 chr2 37536714 37537088 -213150766 - L2 LINE L2 -12 3301 2851 2178 101 20 3 chr2 37538757 37539063 -213148791 - AluSx SINE Alu -1 311 1 345 306 108 13 chr2 37539066 37539223 -213148631 + MIR SINE MIR 91 262 0 1067 205 5 45 chr2 37540651 37540875 -213146979 - MER20 DNA MER1_type -4 215 1 184 167 0 0 chr2 37541774 37541810 -213146044 + MIR SINE MIR 81 116 -92 247 222 124 81 chr2 37542015 37542200 -213145654 - MLT1L LTR MaLR -65 550 358 378 248 35 55 chr2 37542355 37542557 -213145297 - MLT1L LTR MaLR -410 205 8 253 261 29 0 chr2 37542695 37542764 -213145090 + A-rich Low_complexity Low_complexity 4 74 0 348 255 20 41 chr2 37543645 37543705 -213144149 + MER5B DNA MER1_type 1 60 -118 2258 117 0 0 chr2 37543705 37544005 -213143849 + AluSx SINE Alu 1 300 -12 348 255 20 41 chr2 37544005 37544042 -213143812 + MER5B DNA MER1_type 60 96 -82 643 243 164 9 chr2 37544071 37544297 -213143557 + MIR SINE MIR 1 261 -1 313 314 83 54 chr2 37544517 37544867 -213142987 - L2 LINE L2 -340 2974 2615 491 203 68 0 chr2 37545234 37545247 -213142607 - L1MA10 LINE L1 -40 6294 6282 2673 200 26 64 chr2 37545247 37545938 -213141916 - L1ME1 LINE L1 -44 6122 5458 352 252 153 0 chr2 37546282 37546393 -213141461 + MIR SINE MIR 20 147 -115 278 258 43 54 chr2 37546442 37546535 -213141319 - L2 LINE L2 0 3313 3222 326 78 31 31 chr2 37547329 37547393 -213140461 - L1MB8 LINE L1 -3 6175 6112 2160 86 7 0 chr2 37547394 37547674 -213140180 + AluSg SINE Alu 1 282 -28 245 207 0 0 chr2 37547678 37547731 -213140123 - L1MB7 LINE L1 -44 6134 6082 1790 229 48 47 chr2 37547795 37548615 -213139239 - L2 LINE L2 -3 3269 2455 614 211 100 39 chr2 37549136 37549316 -213138538 - MER63A DNA MER1_type -19 191 1 605 191 140 22 chr2 37549412 37549548 -213138306 - MER97b DNA MER1_type? -874 179 28 293 180 57 67 chr2 37549558 37549662 -213138192 + MIR SINE MIR 47 163 -62 262 370 24 6 chr2 37549814 37549979 -213137875 + L2 LINE L2 2914 3081 -191 2199 114 3 0 chr2 37550097 37550396 -213137458 + AluSg1 SINE Alu 3 302 -7 735 212 22 54 chr2 37550420 37550604 -213137250 - MER5B DNA MER1_type 0 178 1 242 285 97 56 chr2 37550669 37550813 -213137041 + L2 LINE L2 3160 3309 -4 2488 88 0 0 chr2 37551704 37552012 -213135842 - AluSg SINE Alu -2 308 1 1935 78 51 31 chr2 37552020 37552172 -213135682 - AluY SINE Alu -12 299 152 549 0 0 0 chr2 37552172 37552233 -213135621 + (TG)n Simple_repeat Simple_repeat 2 62 0 1935 78 51 31 chr2 37552233 37552373 -213135481 - AluY SINE Alu -159 152 1 2911 153 9 13 chr2 37552612 37553077 -213134777 - MLT1C LTR MaLR -4 463 1 332 293 47 47 chr2 37553183 37553289 -213134565 + MIR SINE MIR 17 122 -86 5608 135 23 39 chr2 37554020 37554494 -213133360 + L1MA9 LINE L1 3984 4464 -1682 1588 185 0 11 chr2 37554494 37554780 -213133074 + AluJb SINE Alu 1 283 -29 5608 135 23 39 chr2 37554780 37555318 -213132536 + L1MA9 LINE L1 4464 4980 -1166 2964 127 46 40 chr2 37555318 37555564 -213132290 + L1MA9 LINE L1 5784 6027 -285 2138 128 0 3 chr2 37555564 37555861 -213131993 + AluSq SINE Alu 1 296 -17 2964 127 46 40 chr2 37555861 37556129 -213131725 + L1MA9 LINE L1 6027 6307 -5 285 323 201 38 chr2 37556501 37556870 -213130984 + L2 LINE L2 2842 3270 -2 299 322 120 33 chr2 37557081 37557264 -213130590 + MIR3 SINE MIR 1 199 -9 47 78 0 0 chr2 37557746 37557849 -213130005 + AT_rich Low_complexity Low_complexity 1 103 0 809 299 75 9 chr2 37558090 37558435 -213129419 - L1ME LINE L1 -399 5722 5355 1090 190 62 0 chr2 37558592 37558803 -213129051 + AluJo SINE Alu 86 309 -3 1677 82 0 0 chr2 37558859 37559067 -213128787 - AluSq SINE Alu -16 297 90 1849 175 13 60 chr2 37560095 37560478 -213127376 - MLT1A1 LTR MaLR 0 365 1 2129 116 10 0 chr2 37560628 37560922 -213126932 + AluSx SINE Alu 2 298 -14 382 227 64 39 chr2 37561064 37561267 -213126587 + L1ME4a LINE L1 5772 5979 -142 2012 101 87 3 chr2 37561398 37561686 -213126168 + AluSx SINE Alu 1 312 0 241 333 11 11 chr2 37562116 37562206 -213125648 + (CA)n Simple_repeat Simple_repeat 1 90 0 1521 150 84 60 chr2 37562507 37562771 -213125083 + Tigger3(Golem) DNA MER2_type 1 276 -2753 2269 101 0 7 chr2 37562771 37563068 -213124786 - AluSx SINE Alu -17 295 1 1521 150 84 60 chr2 37563068 37563136 -213124718 + Tigger3(Golem) DNA MER2_type 276 341 -2688 4296 119 19 15 chr2 37563142 37563369 -213124485 + Tigger3(Golem) DNA MER2_type 2341 2566 -463 2884 10 0 0 chr2 37563369 37563680 -213124174 + AluYa5 SINE Alu 1 311 0 4296 119 19 15 chr2 37563680 37564138 -213123716 + Tigger3(Golem) DNA MER2_type 2566 3029 0 27 49 0 0 chr2 37564212 37564253 -213123601 + AT_rich Low_complexity Low_complexity 1 41 0 1106 243 150 57 chr2 37564812 37564851 -213123003 - MLT1J LTR MaLR 0 511 477 1918 134 33 16 chr2 37564851 37565157 -213122697 + AluSx SINE Alu 1 311 -1 1106 243 150 57 chr2 37565157 37565380 -213122474 - MLT1J LTR MaLR -34 477 276 3309 188 24 16 chr2 37565380 37566009 -213121845 - LTR27 LTR ERV1 0 636 3 1106 243 150 57 chr2 37566009 37566105 -213121749 - MLT1J LTR MaLR -235 276 190 2300 71 0 4 chr2 37566105 37566410 -213121444 - AluSc SINE Alu 0 304 1 1106 243 150 57 chr2 37566410 37566501 -213121353 - MLT1J LTR MaLR -321 190 17 753 325 90 38 chr2 37567441 37567887 -213119967 - L2 LINE L2 0 3272 2804 263 266 0 0 chr2 37567952 37568016 -213119838 - MLT1K LTR MaLR -11 577 514 315 130 0 0 chr2 37568146 37568200 -213119654 + (TC)n Simple_repeat Simple_repeat 1 54 0 241 330 19 19 chr2 37568760 37568853 -213119001 - L2 LINE L2 -559 2755 2660 804 167 107 6 chr2 37568853 37569021 -213118833 + MER5A DNA MER1_type 1 185 -4 241 330 19 19 chr2 37569021 37569033 -213118821 - L2 LINE L2 -653 2661 2650 246 266 0 25 chr2 37569538 37569617 -213118237 + T-rich Low_complexity Low_complexity 3 79 0 2270 89 10 0 chr2 37569736 37570028 -213117826 + AluSx SINE Alu 18 312 0 324 188 232 0 chr2 37571631 37571700 -213116154 - Tigger5 DNA MER2_type -2 2321 2237 338 173 0 0 chr2 37571713 37571765 -213116089 - Tigger5 DNA MER2_type -2271 52 1 185 349 81 0 chr2 37571963 37572049 -213115805 - L2 LINE L2 -227 3045 2953 217 289 0 0 chr2 37572914 37572966 -213114888 + (CA)n Simple_repeat Simple_repeat 1 52 0 253 279 155 23 chr2 37573130 37573259 -213114595 + MIR SINE MIR 46 191 -71 416 97 0 16 chr2 37573416 37573478 -213114376 - L2 LINE L2 -69 3244 3184 24 0 0 0 chr2 37574011 37574035 -213113819 + AT_rich Low_complexity Low_complexity 1 24 0 811 280 182 18 chr2 37576527 37576966 -213110888 - L3 LINE CR1 -4 1573 1063 664 263 138 36 chr2 37578196 37578668 -213109186 - L1MEc LINE L1 -4731 1665 1146 * 15864 201 31 12 chr2 37578641 37583537 -213104317 - L1PA16 LINE L1 -2 6233 1251 487 305 48 1 chr2 37583551 37583787 -213104067 - L1PA16 LINE L1 -6558 280 1 514 296 77 25 chr2 37584339 37584535 -213103319 - MIR SINE MIR -44 218 13 2403 94 0 0 chr2 37585383 37585682 -213102172 + AluSg SINE Alu 6 304 -6 212 313 50 0 chr2 37585726 37585806 -213102048 - MIR SINE MIR -82 180 97 899 122 15 0 chr2 37585815 37585946 -213101908 + AluSq/x SINE Alu 1 133 -179 2173 128 0 0 chr2 37585951 37586249 -213101605 + AluSx SINE Alu 1 298 -14 4989 76 6 5 chr2 37587597 37588226 -213099628 + L1PA11 LINE L1 5545 6174 0 250 304 86 58 chr2 37588684 37588938 -213098916 + MIR SINE MIR 3 262 0 1135 255 106 20 chr2 37590288 37590793 -213097061 - L1MC4a LINE L1 -443 7365 6882 2460 83 0 0 chr2 37590793 37591095 -213096759 - AluSp SINE Alu -11 302 1 1135 255 106 20 chr2 37591095 37591162 -213096692 - L1MC4a LINE L1 -926 6882 6822 339 308 0 53 chr2 37593014 37593147 -213094707 - L2 LINE L2 0 3313 3188 434 275 106 7 chr2 37594634 37594776 -213093078 - MIR SINE MIR -10 252 97 2403 94 0 0 chr2 37594821 37595130 -213092724 - AluSc SINE Alu 0 309 1 2382 76 0 7 chr2 37596296 37596597 -213091257 + AluSc SINE Alu 1 299 -10 340 220 55 11 chr2 37596718 37596809 -213091045 - MIR SINE MIR -84 178 84 242 242 0 32 chr2 37597240 37597302 -213090552 - L2 LINE L2 0 3272 3213 300 274 49 20 chr2 37597993 37598103 -213089751 + MER5A DNA MER1_type 63 164 -14 2146 108 3 0 chr2 37598421 37598708 -213089146 - AluSp SINE Alu -7 306 19 1951 211 15 66 chr2 37599848 37600087 -213087767 + MLT1D LTR MaLR 1 251 -254 2241 128 77 8 chr2 37600087 37600252 -213087602 - THE1C LTR MaLR 0 375 223 276 30 0 0 chr2 37600252 37600285 -213087569 + (GA)n Simple_repeat Simple_repeat 1 33 0 2241 128 77 8 chr2 37600285 37600470 -213087384 - THE1C LTR MaLR -152 223 1 1951 211 15 66 chr2 37600470 37600762 -213087092 + MLT1D LTR MaLR 251 505 0 1692 181 7 13 chr2 37601084 37601383 -213086471 + AluJo SINE Alu 1 297 -15 296 186 17 0 chr2 37601411 37601470 -213086384 - MIR SINE MIR -102 160 101 203 214 79 67 chr2 37601774 37601863 -213085991 + L2 LINE L2 3171 3260 -12 199 429 36 9 chr2 37602641 37602753 -213085101 - L3b LINE CR1 -29 1554 1440 2167 123 0 0 chr2 37602987 37603289 -213084565 + AluSx SINE Alu 1 302 -10 692 272 9 60 chr2 37603297 37603514 -213084340 - MIR SINE MIR -21 241 36 274 257 10 79 chr2 37603689 37603790 -213084064 - MIR SINE MIR -58 204 111 928 183 24 28 chr2 37604499 37604712 -213083142 - L1MB7 LINE L1 0 6184 5973 419 228 20 20 chr2 37604972 37605073 -213082781 - L2 LINE L2 0 3313 3213 265 230 57 98 chr2 37605959 37606086 -213081768 + L1ME LINE L1 5279 5410 -711 2138 117 7 0 chr2 37606086 37606393 -213081461 + AluSg SINE Alu 2 310 0 265 230 57 98 chr2 37606393 37606561 -213081293 + L1ME LINE L1 5410 5665 -456 1741 118 3 38 chr2 37606962 37607103 -213080751 + AluJo SINE Alu 1 128 -184 2102 96 7 0 chr2 37607103 37607394 -213080460 + AluSp SINE Alu 12 304 -9 1741 118 3 38 chr2 37607394 37607540 -213080314 + AluJo SINE Alu 128 278 -34 185 65 32 0 chr2 37607545 37607576 -213080278 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 26 0 0 27 chr2 37608288 37608300 -213079554 + AT_rich Low_complexity Low_complexity 1 12 -24 1760 102 84 7 chr2 37608300 37608574 -213079280 + AluSx SINE Alu 1 295 -17 26 0 0 27 chr2 37608574 37608598 -213079256 + AT_rich Low_complexity Low_complexity 12 36 0 262 362 43 21 chr2 37610828 37610969 -213076885 - L3 LINE CR1 -1 1576 1433 253 125 0 0 chr2 37611049 37611081 -213076773 + Charlie1 DNA MER1_type 1 32 -2729 1016 185 68 136 chr2 37611102 37611356 -213076498 + Charlie1 DNA MER1_type 2343 2613 -148 1920 128 21 0 chr2 37611356 37611645 -213076209 + AluSx SINE Alu 1 295 -17 2379 61 3 6 chr2 37611646 37611957 -213075897 + AluY SINE Alu 1 310 -1 1016 185 68 136 chr2 37611957 37612126 -213075728 + Charlie1 DNA MER1_type 2612 2739 -22 915 324 138 18 chr2 37612148 37612777 -213075077 - L3 LINE CR1 -304 1273 569 210 309 36 0 chr2 37612961 37613016 -213074838 - L2 LINE L2 -15 3257 3201 532 246 273 0 chr2 37614048 37614235 -213073619 + MIR SINE MIR 11 248 -14 1870 94 30 11 chr2 37614291 37614557 -213073297 - L1PA11 LINE L1 -1 6173 5903 495 281 16 0 chr2 37615338 37615459 -213072395 - MIR3 SINE MIR -42 166 44 217 224 12 12 chr2 37615636 37615721 -213072133 + GA-rich Low_complexity Low_complexity 4 88 0 204 327 0 0 chr2 37616047 37616099 -213071755 + MIR SINE MIR 204 255 -7 409 314 51 29 chr2 37616136 37616311 -213071543 + L3 LINE CR1 1387 1565 -12 22 0 0 0 chr2 37618004 37618026 -213069828 + AT_rich Low_complexity Low_complexity 1 22 0 333 320 176 40 chr2 37618373 37619050 -213068804 - L2 LINE L2 -542 2772 2004 293 245 75 21 chr2 37619098 37619192 -213068662 + MER5B DNA MER1_type 1 99 -79 360 196 0 54 chr2 37619201 37619289 -213068565 + MER5A DNA MER1_type 4 85 -104 286 233 278 0 chr2 37620064 37620154 -213067700 - MER5A DNA MER1_type -6 183 69 477 240 25 16 chr2 37622372 37622493 -213065361 + MIR3 SINE MIR 33 154 -54 535 280 97 11 chr2 37623999 37624185 -213063669 + MIR3 SINE MIR 4 205 -3 209 230 108 0 chr2 37624586 37624660 -213063194 - MIR3 SINE MIR -11 197 116 225 192 24 0 chr2 37625431 37625490 -213062364 - MIR SINE MIR -87 121 59 2205 183 34 28 chr2 37626227 37626729 -213061125 + MLT1D LTR MaLR 1 505 0 563 242 0 24 chr2 37626882 37627006 -213060848 + MER5B DNA MER1_type 8 128 -50 245 252 38 137 chr2 37626899 37627030 -213060824 - MER5A DNA MER1_type -24 165 48 * 755 242 13 0 chr2 37627392 37627549 -213060305 + MER5B DNA MER1_type 13 171 -7 22 0 0 0 chr2 37627742 37627764 -213060090 + AT_rich Low_complexity Low_complexity 1 22 0 467 238 252 0 chr2 37627782 37627933 -213059921 + MER5A DNA MER1_type 1 189 0 222 276 75 52 chr2 37628994 37629128 -213058726 - L3 LINE CR1 -187 1390 1254 226 344 0 16 chr2 37629555 37629616 -213058238 - L3b LINE CR1 -10 1573 1514 1882 204 23 72 chr2 37629980 37630180 -213057674 - MER82 DNA MER2_type 0 653 445 2021 63 0 26 chr2 37630180 37630533 -213057321 - AluSq SINE Alu 0 365 20 1882 204 23 72 chr2 37630533 37630806 -213057048 - MER82 DNA MER2_type -208 445 202 21 0 0 0 chr2 37630945 37630966 -213056888 + AT_rich Low_complexity Low_complexity 1 21 0 1034 198 0 29 chr2 37631108 37631315 -213056539 - MER82 DNA MER2_type -452 201 1 688 135 0 0 chr2 37631507 37631603 -213056251 - AluJ/FLAM SINE Alu -215 97 2 23 33 0 0 chr2 37631774 37631804 -213056050 + AT_rich Low_complexity Low_complexity 1 30 0 416 186 62 44 chr2 37631984 37632097 -213055757 - MER69A DNA AcHobo -1 176 62 388 304 179 29 chr2 37632182 37632668 -213055186 - L2 LINE L2 -677 2637 2079 1971 128 0 13 chr2 37633312 37633617 -213054237 + AluSg SINE Alu 1 301 -9 1583 183 3 17 chr2 37634268 37634569 -213053285 + AluJo SINE Alu 1 297 -15 2045 121 3 0 chr2 37634603 37634901 -213052953 + AluSx SINE Alu 1 299 -13 2265 101 0 0 chr2 37634902 37635208 -213052646 + AluSg SINE Alu 1 306 -4 694 148 0 101 chr2 37635241 37635390 -213052464 - MER45A DNA AcHobo -44 134 1 293 204 93 0 chr2 37635877 37635958 -213051896 - MIR SINE MIR -75 133 40 1652 126 112 7 chr2 37636363 37636640 -213051214 + AluSg1 SINE Alu 1 306 -3 246 274 128 34 chr2 37637631 37637748 -213050106 - LTR67 LTR ERVL -6 551 424 266 291 11 54 chr2 37638104 37638217 -213049637 - LTR67 LTR ERVL -363 194 37 378 143 29 43 chr2 37638831 37638901 -213048953 + MER81 DNA DNA 41 109 -5 409 256 8 53 chr2 37639029 37639162 -213048692 - MIR3 SINE MIR -79 129 3 2253 98 0 0 chr2 37639387 37639683 -213048171 + AluSc SINE Alu 1 296 -13 503 128 84 2 chr2 37639754 37639847 -213048007 + L1MB4 LINE L1 6046 6151 -29 1913 156 0 3 chr2 37639858 37640165 -213047689 + AluJb SINE Alu 1 306 -6 240 35 0 0 chr2 37640836 37640865 -213046989 + (CA)n Simple_repeat Simple_repeat 1 29 0 228 241 13 63 chr2 37641084 37641163 -213046691 + MIR3 SINE MIR 128 202 -6 2031 99 27 3 chr2 37641380 37641554 -213046300 - AluSc SINE Alu -8 301 116 188 0 74 0 chr2 37641554 37641581 -213046273 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2031 99 27 3 chr2 37641581 37641700 -213046154 - AluSc SINE Alu -193 116 1 189 360 72 14 chr2 37642694 37642833 -213045021 + MIR SINE MIR 108 254 -8 1791 146 11 0 chr2 37644249 37644552 -213043302 - AluSx SINE Alu 0 306 1 1105 135 0 0 chr2 37644683 37644846 -213043008 + FRAM SINE Alu 2 164 -12 2089 98 3 3 chr2 37644847 37645142 -213042712 + AluSp SINE Alu 1 295 -18 1990 143 0 0 chr2 37645470 37645771 -213042083 - AluSx SINE Alu -11 301 1 355 286 246 6 chr2 37646292 37646463 -213041391 + L3 LINE CR1 1318 1529 -48 2294 101 0 9 chr2 37646497 37646813 -213041041 - AluSq SINE Alu 0 313 1 366 288 100 78 chr2 37647361 37647686 -213040168 + L2 LINE L2 1552 1868 -1446 1521 151 76 14 chr2 37647686 37647977 -213039877 - AluSc SINE Alu 0 309 1 366 288 100 78 chr2 37647977 37648005 -213039849 + L2 LINE L2 1868 1894 -1420 2066 124 3 0 chr2 37648005 37648303 -213039551 + AluSx SINE Alu 1 299 -13 366 288 100 78 chr2 37648303 37648399 -213039455 + L2 LINE L2 1894 2012 -1302 301 342 60 0 chr2 37648405 37648522 -213039332 + L3 LINE CR1 1453 1576 -1 1875 129 21 0 chr2 37649897 37650184 -213037670 + AluSx SINE Alu 1 293 -19 509 310 32 13 chr2 37650195 37650353 -213037501 + MER5B DNA MER1_type 18 178 0 1101 214 66 7 chr2 37650574 37650863 -213036991 - MER114 LTR ERV -342 306 1 1818 109 12 75 chr2 37651014 37651335 -213036519 + AluSx SINE Alu 1 301 -11 363 183 14 0 chr2 37651580 37651651 -213036203 - MER94 DNA DNA -62 72 1 819 307 121 22 chr2 37651728 37652308 -213035546 - L2 LINE L2 -2527 787 151 221 303 11 34 chr2 37652363 37652452 -213035402 - MIR3 SINE MIR -14 194 108 187 250 0 0 chr2 37653197 37653229 -213034625 - L2 LINE L2 -98 3174 3143 294 295 51 0 chr2 37653333 37653411 -213034443 - MIR SINE MIR -1 261 180 362 106 0 0 chr2 37653430 37653477 -213034377 - MSTD LTR MaLR 0 457 411 * 1222 206 16 24 chr2 37653452 37653700 -213034154 - MSTD LTR MaLR -150 246 1 388 350 7 0 chr2 37653704 37653844 -213034010 - MIR SINE MIR -105 157 17 326 336 19 10 chr2 37654129 37654233 -213033621 + L2 LINE L2 2974 3078 -194 1829 134 35 14 chr2 37654617 37654907 -213032947 - AluSx SINE Alu -16 296 1 398 318 211 16 chr2 37654949 37655333 -213032521 - L2 LINE L2 -5 3267 2809 238 282 14 0 chr2 37655341 37655412 -213032442 - MLT1L LTR MaLR 0 615 544 449 248 14 48 chr2 37657466 37657611 -213030243 - MIR3 SINE MIR -66 142 3 651 310 28 38 chr2 37658276 37658563 -213029291 + REP3 LTR ERV 3 286 -276 2049 136 3 0 chr2 37658565 37658867 -213028987 - AluSx SINE Alu -5 307 5 453 86 0 0 chr2 37658898 37658968 -213028886 + AluJ/FRAM SINE Alu 233 302 -10 394 270 132 11 chr2 37658990 37659164 -213028690 + REP3 LTR ERV 335 529 -33 1902 145 3 23 chr2 37659654 37659958 -213027896 - AluJb SINE Alu -14 298 1 2179 119 0 3 chr2 37659974 37660284 -213027570 - AluY SINE Alu 0 311 3 325 302 40 47 chr2 37660700 37660784 -213027070 - MIR SINE MIR -32 230 146 3438 153 64 11 chr2 37660784 37660981 -213026873 - L1MA5 LINE L1 -5 6295 6110 2425 58 10 10 chr2 37660981 37661289 -213026565 + AluY SINE Alu 1 308 -3 3438 153 64 11 chr2 37661289 37661730 -213026124 - L1MA5 LINE L1 -190 6110 5623 325 302 40 47 chr2 37661730 37661794 -213026060 - MIR SINE MIR -116 146 83 5087 238 45 8 chr2 37662713 37664245 -213023609 - L1MEc LINE L1 -2231 3984 2397 1336 132 0 0 chr2 37664250 37664439 -213023415 - AluSg/x SINE Alu -8 304 116 2037 137 0 3 chr2 37664476 37664795 -213023059 + AluSg SINE Alu 1 318 0 1914 257 51 28 chr2 37664796 37664835 -213023019 - L1MEc LINE L1 -4325 2071 2034 2096 73 3 108 chr2 37664835 37665176 -213022678 + AluY SINE Alu 1 305 -6 1914 257 51 28 chr2 37665176 37665887 -213021967 - L1MEc LINE L1 -4362 2034 1304 1371 273 92 25 chr2 37665888 37666398 -213021456 - L1MEc LINE L1 -5814 582 39 2476 77 0 0 chr2 37666488 37666798 -213021056 - AluSp SINE Alu -3 310 1 2691 62 5 50 chr2 37667160 37667561 -213020293 - L1PB1 LINE L1 0 6151 5769 * 6721 68 37 0 chr2 37667553 37668509 -213019345 - L1PA8 LINE L1 -2 6170 5205 855 166 104 19 chr2 37668592 37668725 -213019129 - MER93b LTR ERV1 0 373 253 2508 102 41 78 chr2 37668725 37669186 -213018668 + MLT2A1 LTR ERVL 1 444 0 855 166 104 19 chr2 37669186 37669368 -213018486 - MER93b LTR ERV1 -120 253 1 333 103 52 0 chr2 37669507 37669565 -213018289 + MLT1L LTR MaLR 216 276 -339 783 165 43 182 chr2 37669572 37669792 -213018062 - MLT1B LTR MaLR 0 390 205 414 290 95 37 chr2 37670479 37671039 -213016815 + L1MC/D LINE L1 3688 4289 -1857 911 114 8 0 chr2 37671117 37671248 -213016606 - FLAM_C SINE Alu 0 133 2 324 308 159 14 chr2 37671583 37671801 -213016053 + L1MC/D LINE L1 4741 5009 -1137 405 0 0 0 chr2 37671801 37671846 -213016008 + (CA)n Simple_repeat Simple_repeat 2 46 0 324 308 159 14 chr2 37671846 37671903 -213015951 + L1MC/D LINE L1 5009 5056 -1090 1356 165 88 11 chr2 37672045 37672318 -213015536 - AluJo SINE Alu -18 294 1 1352 231 181 31 chr2 37672771 37673256 -213014598 + MLT1E2 LTR MaLR 1 558 -68 463 275 46 61 chr2 37673271 37673617 -213014237 + L1MC/D LINE L1 5362 5702 -540 333 240 223 17 chr2 37674048 37674223 -213013631 + L2 LINE L2 3087 3297 -16 290 289 182 0 chr2 37674378 37674499 -213013355 - MIR SINE MIR -49 213 71 319 263 135 23 chr2 37675441 37675574 -213012280 - L2 LINE L2 -2 3311 3164 507 73 0 0 chr2 37680722 37680790 -213007064 + (CA)n Simple_repeat Simple_repeat 2 69 0 478 87 39 10 chr2 37681225 37681329 -213006525 + (TA)n Simple_repeat Simple_repeat 1 107 0 22 0 0 0 chr2 37685085 37685107 -213002747 + AT_rich Low_complexity Low_complexity 1 22 0 2373 97 0 3 chr2 37686040 37686350 -213001504 + AluSc SINE Alu 1 309 0 1276 224 48 3 chr2 37687182 37687513 -213000341 + L1MC4 LINE L1 7693 8038 -4 2278 114 0 0 chr2 37687712 37688020 -212999834 + AluSx SINE Alu 1 308 -4 256 216 0 0 chr2 37688752 37688803 -212999051 - MARNA DNA Mariner -120 466 416 202 237 17 34 chr2 37689358 37689417 -212998437 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 27 29 0 0 chr2 37690590 37690624 -212997230 + AT_rich Low_complexity Low_complexity 1 34 0 2668 205 74 57 chr2 37690862 37691539 -212996315 + L1ME2 LINE L1 5351 6015 -149 1893 159 128 16 chr2 37691539 37691922 -212995932 + MSTA LTR MaLR 3 428 0 773 124 7 58 chr2 37691925 37692062 -212995792 - FLAM_C SINE Alu -1 132 3 2668 205 74 57 chr2 37692062 37692174 -212995680 + L1ME2 LINE L1 6016 6158 -6 1850 113 68 11 chr2 37692230 37692535 -212995319 + AluSx SINE Alu 1 320 0 32 43 0 0 chr2 37693029 37693075 -212994779 + AT_rich Low_complexity Low_complexity 1 46 0 187 182 30 0 chr2 37693489 37693522 -212994332 - MIR SINE MIR -75 187 154 214 333 24 73 chr2 37693602 37693725 -212994129 - L2 LINE L2 -22 3250 3134 247 355 57 54 chr2 37694596 37695019 -212992835 - L2 LINE L2 -1294 2020 1597 776 231 35 0 chr2 37696262 37696431 -212991423 + MER58C DNA MER1_type 2 176 -39 297 0 0 0 chr2 37696569 37696602 -212991252 + (CA)n Simple_repeat Simple_repeat 1 33 0 5138 123 44 2 chr2 37696614 37697452 -212990402 - L1PA15 LINE L1 -8 6157 5285 * 14610 195 29 16 chr2 37697450 37697569 -212990285 - L1P4 LINE L1 -734 5431 5315 2317 55 41 3 chr2 37697569 37697860 -212989994 - AluY SINE Alu -9 302 1 14610 195 29 16 chr2 37697860 37699537 -212988317 - L1P4 LINE L1 -850 5315 3661 2279 98 0 19 chr2 37699537 37699852 -212988002 - AluSq SINE Alu -4 309 1 14610 195 29 16 chr2 37699852 37700409 -212987445 - L1P4 LINE L1 -2504 3661 3113 2217 106 0 0 chr2 37700409 37700691 -212987163 - AluSg SINE Alu -22 288 7 14610 195 29 16 chr2 37700691 37700915 -212986939 - L1P4 LINE L1 -3052 3113 2893 1453 190 31 17 chr2 37700915 37701204 -212986650 - AluJb SINE Alu -19 293 1 14610 195 29 16 chr2 37701204 37702023 -212985831 - L1P4 LINE L1 -3272 2893 1990 574 107 11 203 chr2 37702047 37702234 -212985620 + FRAM SINE Alu 18 168 -8 480 196 49 0 chr2 37702235 37702337 -212985517 - U6 snRNA snRNA 0 107 1 375 360 46 29 chr2 37702967 37703206 -212984648 + MIR SINE MIR 20 262 0 22 56 0 0 chr2 37704676 37704712 -212983142 + AT_rich Low_complexity Low_complexity 1 36 0 6121 123 118 13 chr2 37705291 37706405 -212981449 + Tigger3b DNA MER2_type 1 1231 0 789 256 6 0 chr2 37706514 37706694 -212981160 - MIR SINE MIR -50 212 32 409 350 13 6 chr2 37706746 37706903 -212980951 + L3 LINE CR1 1143 1300 -277 1866 210 82 41 chr2 37706913 37707428 -212980426 + MLT1F LTR MaLR 1 536 -6 782 256 0 0 chr2 37708248 37708404 -212979450 + AluY SINE Alu 133 288 -23 2288 105 0 0 chr2 37708500 37708794 -212979060 + AluSc SINE Alu 1 294 -15 2151 105 0 29 chr2 37708811 37709124 -212978730 + AluY SINE Alu 1 304 -7 274 286 0 12 chr2 37709127 37709211 -212978643 + L1MEd LINE L1 1032 1114 -5091 375 205 16 33 chr2 37709277 37709399 -212978455 + L1MEd LINE L1 1101 1220 -4997 230 274 81 81 chr2 37709482 37709741 -212978113 + L1MEd LINE L1 1496 1754 -4642 1935 162 13 0 chr2 37710065 37710367 -212977487 + AluJo SINE Alu 1 306 -6 360 303 0 32 chr2 37710367 37710497 -212977357 + L1MEd LINE L1 2228 2394 -3875 2367 71 3 3 chr2 37710497 37710793 -212977061 - AluY SINE Alu -15 296 1 1710 179 0 13 chr2 37710822 37711123 -212976731 + AluJb SINE Alu 1 297 -15 261 269 131 69 chr2 37711156 37711301 -212976553 - L2 LINE L2 -661 2653 2500 2377 74 0 3 chr2 37711589 37711885 -212975969 - AluY SINE Alu -16 295 1 2046 122 7 3 chr2 37712368 37712672 -212975182 - AluSx SINE Alu -7 305 1 629 225 31 84 chr2 37713332 37713559 -212974295 + L1ME3A LINE L1 5941 6155 -15 2365 107 0 0 chr2 37713578 37713888 -212973966 - AluSx SINE Alu 0 312 3 2174 124 3 0 chr2 37713899 37714206 -212973648 - AluSx SINE Alu -3 309 2 21 36 0 0 chr2 37714381 37714409 -212973445 + AT_rich Low_complexity Low_complexity 1 28 0 1427 182 0 85 chr2 37714685 37714821 -212973033 + AluJo SINE Alu 1 96 -216 2063 123 0 3 chr2 37714821 37715105 -212972749 - AluSx SINE Alu -29 283 1 1427 182 0 85 chr2 37715105 37715286 -212972568 + AluJo SINE Alu 96 291 -21 180 0 0 0 chr2 37715906 37715926 -212971928 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2284 117 0 16 chr2 37715953 37716270 -212971584 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 37716280 37716301 -212971553 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 37717134 37717178 -212970676 + AT_rich Low_complexity Low_complexity 1 44 0 704 136 7 100 chr2 37717223 37717322 -212970532 - FAM SINE Alu -158 163 79 1878 178 0 6 chr2 37717322 37717636 -212970218 + AluJb SINE Alu 1 312 0 704 136 7 100 chr2 37717636 37717676 -212970178 - FAM SINE Alu -242 79 37 2155 127 0 7 chr2 37718010 37718310 -212969544 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 37719658 37719679 -212968175 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr2 37721880 37721924 -212965930 + (CA)n Simple_repeat Simple_repeat 2 45 0 2017 127 23 0 chr2 37721984 37722104 -212965750 + AluSq SINE Alu 1 117 -196 441 0 0 0 chr2 37722104 37722153 -212965701 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 2017 127 23 0 chr2 37722153 37722331 -212965523 + AluSq SINE Alu 117 306 -7 1755 222 167 93 chr2 37722706 37723477 -212964377 + L2 LINE L2 2207 2919 -394 288 0 0 0 chr2 37723477 37723509 -212964345 + (TG)n Simple_repeat Simple_repeat 1 32 0 1755 222 167 93 chr2 37723509 37723527 -212964327 + L2 LINE L2 2919 2934 -379 1805 170 0 10 chr2 37723527 37723821 -212964033 - AluJo SINE Alu -21 291 1 1755 222 167 93 chr2 37723821 37724041 -212963813 + L2 LINE L2 2934 3311 -2 2439 85 0 0 chr2 37725315 37725621 -212962233 - AluSx SINE Alu -6 306 1 1339 149 27 5 chr2 37725788 37726009 -212961845 - MER46A DNA MER2_type 0 236 11 2014 123 14 0 chr2 37726085 37726370 -212961484 + AluSx SINE Alu 4 292 -20 1507 161 27 23 chr2 37726973 37727272 -212960582 + L1PA16 LINE L1 5867 6166 0 2002 129 3 0 chr2 37727576 37727862 -212959992 + AluSx SINE Alu 1 287 -25 365 109 0 0 chr2 37727862 37727917 -212959937 + Alu SINE Alu 238 292 -8 551 265 54 12 chr2 37729663 37729829 -212958025 - MER117 DNA MER1_type 0 197 25 2480 58 0 0 chr2 37729883 37730177 -212957677 + AluY SINE Alu 1 294 -17 238 291 136 78 chr2 37730244 37730450 -212957404 - L3 LINE CR1 -1127 450 233 2179 90 0 42 chr2 37730467 37730779 -212957075 + AluY SINE Alu 1 299 -12 2322 107 3 0 chr2 37731723 37732032 -212955822 + AluSp SINE Alu 1 310 -3 2348 72 7 7 chr2 37732283 37732574 -212955280 - AluY SINE Alu -20 291 1 1124 179 102 38 chr2 37732592 37732827 -212955027 - AluJo SINE Alu -61 251 2 33 25 0 0 chr2 37732939 37732979 -212954875 + AT_rich Low_complexity Low_complexity 1 40 0 323 269 129 59 chr2 37733408 37733594 -212954260 - MIR SINE MIR -56 206 8 267 241 9 27 chr2 37733708 37733820 -212954034 + GA-rich Low_complexity Low_complexity 2 111 0 261 139 0 0 chr2 37734698 37734741 -212953113 + (CCTA)n Simple_repeat Simple_repeat 2 44 0 1642 154 4 32 chr2 37734742 37735021 -212952833 - AluSx SINE Alu -30 282 12 22 0 0 0 chr2 37735115 37735137 -212952717 + AT_rich Low_complexity Low_complexity 1 22 0 2167 92 0 18 chr2 37735446 37735759 -212952095 + AluSc SINE Alu 1 308 0 2269 100 0 0 chr2 37736108 37736407 -212951447 + AluY SINE Alu 1 299 -12 22 56 0 0 chr2 37737637 37737673 -212950181 + AT_rich Low_complexity Low_complexity 1 36 0 253 299 142 22 chr2 37738170 37738304 -212949550 + MIR SINE MIR 20 169 -93 180 308 0 0 chr2 37738278 37738317 -212949537 + L2 LINE L2 3212 3250 -22 * 833 229 86 4 chr2 37738486 37738730 -212949124 - Charlie7 DNA MER1_type -353 2259 1996 570 279 88 7 chr2 37738736 37739008 -212948846 - Charlie7 DNA MER1_type -721 1891 1598 1817 149 3 7 chr2 37739384 37739666 -212948188 + AluSx SINE Alu 3 283 -29 309 26 0 0 chr2 37739666 37739704 -212948150 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 2342 97 3 0 chr2 37739807 37740106 -212947748 - AluSq SINE Alu -13 300 1 1324 74 42 23 chr2 37740788 37741003 -212946851 + L1MA2 LINE L1 6086 6304 0 1794 147 21 4 chr2 37741021 37741300 -212946554 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 37741301 37741330 -212946524 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 37741335 37741359 -212946495 + AT_rich Low_complexity Low_complexity 1 24 0 2114 102 23 16 chr2 37741481 37741786 -212946068 + AluSx SINE Alu 1 307 -5 2096 118 3 3 chr2 37742108 37742404 -212945450 + AluSg SINE Alu 4 299 -11 291 241 176 9 chr2 37742404 37742512 -212945342 - MIR SINE MIR -18 244 119 215 245 0 0 chr2 37742810 37742863 -212944991 + A-rich Low_complexity Low_complexity 1 53 0 965 192 73 42 chr2 37743148 37743434 -212944420 + L1ME1 LINE L1 5767 6061 -105 1910 134 0 28 chr2 37743528 37743818 -212944036 + AluSx SINE Alu 1 282 -30 1172 125 0 11 chr2 37743839 37744015 -212943839 + AluSg/x SINE Alu 127 300 -10 821 240 27 14 chr2 37744220 37744441 -212943413 + L1MEc LINE L1 203 426 -6137 685 285 4 23 chr2 37744433 37744696 -212943158 + L1MEc LINE L1 1290 1547 -4837 * 1963 212 100 42 chr2 37744677 37744728 -212943126 + L1MEc LINE L1 1781 1828 -4735 2385 89 0 0 chr2 37744728 37745030 -212942824 + AluSq SINE Alu 1 302 -11 1963 212 100 42 chr2 37745030 37745638 -212942216 + L1MEc LINE L1 1828 2478 -4085 309 246 0 0 chr2 37746253 37746310 -212941544 + MER58B DNA MER1_type 1 57 -284 * 769 199 68 0 chr2 37746303 37746449 -212941405 + MER58B DNA MER1_type 182 337 -4 1030 299 180 67 chr2 37746496 37747768 -212940086 + L2 LINE L2 983 2580 -692 416 123 0 0 chr2 37747768 37747825 -212940029 + U6 snRNA snRNA 1 57 -50 1030 299 180 67 chr2 37747825 37748361 -212939493 + L2 LINE L2 2580 3054 -218 1690 168 10 27 chr2 37748827 37749125 -212938729 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 37749286 37749315 -212938539 + AT_rich Low_complexity Low_complexity 1 29 0 485 281 15 40 chr2 37749540 37749700 -212938154 + MIR3 SINE MIR 2 160 -66 2429 60 0 3 chr2 37749752 37750052 -212937802 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 37750062 37750111 -212937743 + (TA)n Simple_repeat Simple_repeat 1 49 0 183 114 0 0 chr2 37751882 37751917 -212935937 + (A)n Simple_repeat Simple_repeat 1 35 0 2021 137 10 16 chr2 37752077 37752391 -212935463 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 37753285 37753311 -212934543 + AT_rich Low_complexity Low_complexity 1 26 0 228 268 18 0 chr2 37753966 37754022 -212933832 - L2 LINE L2 -9 3263 3207 251 289 14 113 chr2 37754164 37754306 -212933548 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 37754725 37754746 -212933108 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 37755055 37755086 -212932768 + AT_rich Low_complexity Low_complexity 1 31 0 2326 101 3 0 chr2 37755194 37755502 -212932352 + AluSp SINE Alu 1 309 -4 257 298 165 54 chr2 37755545 37755633 -212932221 + L2 LINE L2 1698 1775 -1539 2163 113 0 0 chr2 37755633 37755924 -212931930 + AluSc SINE Alu 2 292 -17 257 298 165 54 chr2 37755924 37756331 -212931523 + L2 LINE L2 1775 2248 -1066 238 333 156 52 chr2 37756418 37756706 -212931148 + L2 LINE L2 2432 2749 -565 863 232 170 35 chr2 37756708 37757049 -212930805 + L1MC4 LINE L1 7632 8018 -24 1581 220 0 0 chr2 37757074 37757379 -212930475 + AluJo SINE Alu 1 312 0 2217 97 17 0 chr2 37757704 37757993 -212929861 + AluSc SINE Alu 1 294 -15 2085 121 20 7 chr2 37758005 37758302 -212929552 + AluSx SINE Alu 1 301 -11 2506 70 0 0 chr2 37758912 37759211 -212928643 + AluY SINE Alu 1 299 -12 2258 105 3 0 chr2 37759612 37759916 -212927938 + AluSp SINE Alu 1 305 -8 2246 99 14 0 chr2 37760333 37760626 -212927228 + AluSx SINE Alu 2 298 -14 1792 167 0 7 chr2 37762062 37762362 -212925492 + AluJo SINE Alu 1 298 -14 705 164 31 23 chr2 37762384 37762512 -212925342 + FLAM_C SINE Alu 1 129 -4 399 311 155 10 chr2 37762518 37762827 -212925027 + L1MC/D LINE L1 5420 5773 -2035 231 313 0 0 chr2 37763138 37763205 -212924649 + A-rich Low_complexity Low_complexity 1 67 0 2167 119 0 0 chr2 37763207 37763500 -212924354 + AluSx SINE Alu 1 293 -19 2403 66 0 20 chr2 37763500 37763803 -212924051 + AluSg1 SINE Alu 1 297 -12 2263 102 0 3 chr2 37764225 37764520 -212923334 - AluSg SINE Alu -16 294 1 2359 104 0 0 chr2 37764987 37765284 -212922570 + AluSx SINE Alu 1 297 -15 994 163 47 0 chr2 37765306 37765478 -212922376 - MER5A DNA MER1_type -9 180 1 195 42 0 0 chr2 37765518 37765542 -212922312 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2042 128 16 10 chr2 37765588 37765892 -212921962 + AluSx SINE Alu 1 306 -6 308 163 0 0 chr2 37765929 37765972 -212921882 - Alu SINE Alu -257 43 1 366 269 161 8 chr2 37766364 37766494 -212921360 - L2 LINE L2 0 3272 3123 1720 154 33 0 chr2 37766658 37766957 -212920897 - AluJo SINE Alu 0 308 1 2280 95 7 0 chr2 37766997 37767292 -212920562 - AluSx SINE Alu -15 297 1 633 165 9 18 chr2 37767443 37767552 -212920302 - FRAM SINE Alu -16 160 53 243 0 0 0 chr2 37767897 37767924 -212919930 + (CA)n Simple_repeat Simple_repeat 2 28 0 1109 146 38 47 chr2 37768022 37768235 -212919619 - MER2 DNA MER2_type -134 211 1 810 162 128 7 chr2 37768472 37768620 -212919234 - AluJb SINE Alu -23 289 124 2101 103 10 10 chr2 37768665 37768966 -212918888 + AluY SINE Alu 1 301 -10 1726 164 0 4 chr2 37769632 37769901 -212917953 + AluSx SINE Alu 1 268 -44 26 0 0 0 chr2 37769935 37769961 -212917893 + AT_rich Low_complexity Low_complexity 1 26 0 196 290 87 0 chr2 37770410 37770479 -212917375 - L2 LINE L2 0 3313 3239 33 0 0 0 chr2 37770828 37770861 -212916993 + AT_rich Low_complexity Low_complexity 1 33 0 223 172 17 52 chr2 37771885 37771899 -212915955 + GA-rich Low_complexity Low_complexity 2 15 -42 2315 97 10 3 chr2 37771899 37772210 -212915644 + AluSp SINE Alu 1 313 0 223 172 17 52 chr2 37772210 37772224 -212915630 + GA-rich Low_complexity Low_complexity 15 28 -29 1609 210 0 16 chr2 37772224 37772538 -212915316 + AluJb SINE Alu 1 309 -3 223 172 17 52 chr2 37772538 37772566 -212915288 + GA-rich Low_complexity Low_complexity 28 57 0 2010 153 0 7 chr2 37772981 37773281 -212914573 + AluSx SINE Alu 1 298 -14 197 244 24 0 chr2 37773350 37773391 -212914463 + MIR SINE MIR 47 88 -174 1013 104 0 0 chr2 37773808 37773973 -212913881 - AluSc SINE Alu 0 313 149 661 51 0 0 chr2 37773988 37774067 -212913787 - AluY SINE Alu -230 80 2 258 139 0 0 chr2 37774329 37774372 -212913482 + L1M4 LINE L1 3903 3945 -2201 180 0 0 0 chr2 37774377 37774397 -212913457 + (TTA)n Simple_repeat Simple_repeat 2 21 0 817 163 0 0 chr2 37774397 37774520 -212913334 - FLAM_C SINE Alu -20 123 1 181 369 108 9 chr2 37774790 37774901 -212912953 - L2 LINE L2 0 3272 3151 303 235 142 0 chr2 37775263 37775359 -212912495 + L1MC4 LINE L1 7861 8031 -11 2243 98 0 31 chr2 37775383 37775700 -212912154 + AluY SINE Alu 1 307 -4 1654 177 0 14 chr2 37775708 37776002 -212911852 + AluJb SINE Alu 1 290 -22 250 229 90 23 chr2 37776075 37776196 -212911658 + L1ME LINE L1 5523 5655 -515 2144 110 3 13 chr2 37776391 37776690 -212911164 - AluSq SINE Alu -17 296 1 378 237 155 82 chr2 37776901 37777268 -212910586 + MLT1L LTR MaLR 220 613 -2 325 276 52 47 chr2 37777270 37777462 -212910392 - L1ME LINE L1 -356 5765 5573 2242 114 0 0 chr2 37777536 37777833 -212910021 - AluSx SINE Alu -15 297 1 25 31 0 0 chr2 37777833 37777865 -212909989 + AT_rich Low_complexity Low_complexity 1 32 0 183 42 0 0 chr2 37778224 37778248 -212909606 + (TA)n Simple_repeat Simple_repeat 1 24 0 214 221 104 0 chr2 37778252 37778329 -212909525 - MIR SINE MIR -2 260 176 2124 114 0 0 chr2 37778360 37778649 -212909205 + AluY SINE Alu 1 289 -22 2276 108 0 10 chr2 37778672 37778977 -212908877 + AluSq SINE Alu 1 302 -11 531 341 55 10 chr2 37779592 37779903 -212907951 + L1ME LINE L1 5338 5662 -500 2067 113 14 3 chr2 37780223 37780515 -212907339 + AluSg SINE Alu 1 295 -15 335 255 323 5 chr2 37780518 37780710 -212907144 + L1M4 LINE L1 3723 3975 -2171 2138 111 0 10 chr2 37781736 37782033 -212905821 - AluSc SINE Alu -15 294 1 235 49 49 0 chr2 37782384 37782425 -212905429 + (TA)n Simple_repeat Simple_repeat 1 43 0 322 298 105 24 chr2 37782494 37782618 -212905236 + MIR SINE MIR 18 151 -57 27 0 0 0 chr2 37782808 37782835 -212905019 + AT_rich Low_complexity Low_complexity 1 27 0 2436 84 7 0 chr2 37782927 37783237 -212904617 - AluSx SINE Alu 0 312 1 496 186 21 10 chr2 37783437 37783534 -212904320 + L2 LINE L2 3215 3312 -1 2011 168 6 50 chr2 37783810 37784174 -212903680 + MER7A DNA MER2_type 1 346 0 2367 83 0 0 chr2 37785046 37785335 -212902519 - AluSx SINE Alu -5 307 19 269 338 12 0 chr2 37785425 37785505 -212902349 + L2 LINE L2 3147 3227 -45 23 0 0 0 chr2 37785759 37785782 -212902072 + AT_rich Low_complexity Low_complexity 1 23 0 279 299 13 0 chr2 37786490 37786567 -212901287 - L2 LINE L2 0 3313 3236 1541 173 4 0 chr2 37786626 37786880 -212900974 + MER1B DNA MER1_type 4 258 -81 183 80 0 0 chr2 37786882 37786907 -212900947 + (CA)n Simple_repeat Simple_repeat 2 26 0 187 301 161 21 chr2 37787165 37787258 -212900596 - L2 LINE L2 -209 3063 2958 538 265 43 6 chr2 37787363 37787525 -212900329 + MIR SINE MIR 95 262 0 2457 80 0 0 chr2 37788240 37788539 -212899315 - AluY SINE Alu -12 299 1 922 197 0 28 chr2 37788689 37788867 -212898987 + FAM SINE Alu 3 175 0 2068 162 0 3 chr2 37789066 37789375 -212898479 + AluSx SINE Alu 1 308 -4 2086 122 0 23 chr2 37789473 37789776 -212898078 - AluSq SINE Alu -17 296 1 318 341 77 35 chr2 37790020 37790190 -212897664 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 37790366 37790451 -212897403 + CT-rich Low_complexity Low_complexity 5 85 0 2066 148 51 26 chr2 37790594 37790946 -212896908 - MER46B DNA MER2_type 0 236 1 231 263 126 0 chr2 37791122 37791217 -212896637 - MIR SINE MIR -56 206 100 2006 129 13 10 chr2 37792142 37792444 -212895410 + AluSx SINE Alu 3 305 -7 1302 87 29 0 chr2 37792582 37792755 -212895099 - AluSq SINE Alu -2 311 134 2365 94 7 0 chr2 37792755 37793054 -212894800 - AluSx SINE Alu -8 304 4 401 265 84 96 chr2 37793108 37793676 -212894178 + L1MEd LINE L1 713 1312 -4929 2214 92 14 0 chr2 37793676 37793970 -212893884 + AluY SINE Alu 1 298 -13 401 265 84 96 chr2 37793970 37794038 -212893816 + L1MEd LINE L1 1312 1379 -4862 378 197 28 0 chr2 37794199 37794270 -212893584 + U6 snRNA snRNA 1 73 -34 652 188 109 30 chr2 37794630 37794795 -212893059 - MER5B DNA MER1_type 0 178 1 385 188 150 53 chr2 37795362 37795495 -212892359 - MIR SINE MIR -12 250 105 1235 166 0 5 chr2 37795719 37795950 -212891904 - AluJb SINE Alu 0 315 86 1808 103 64 67 chr2 37795953 37796265 -212891589 - AluJb SINE Alu -1 311 1 1356 248 152 42 chr2 37796267 37797032 -212890822 + L2 LINE L2 2443 3308 -5 2081 93 65 4 chr2 37797366 37797645 -212890209 - AluSc SINE Alu -13 296 1 1888 117 3 96 chr2 37798513 37798847 -212889007 + AluSx SINE Alu 1 303 -9 734 233 146 31 chr2 37799475 37799763 -212888091 + L2 LINE L2 2988 3308 -5 358 326 8 0 chr2 37799763 37799892 -212887962 - MIR3 SINE MIR -71 137 8 214 125 21 21 chr2 37801173 37801221 -212886633 + (CCG)n Simple_repeat Simple_repeat 2 49 0 24 53 0 0 chr2 37801516 37801554 -212886300 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 37801586 37801614 -212886240 + GC_rich Low_complexity Low_complexity 1 28 0 270 0 0 0 chr2 37801736 37801766 -212886088 + (CA)n Simple_repeat Simple_repeat 2 31 0 203 329 73 0 chr2 37803019 37803101 -212884753 - MIR3 SINE MIR -26 182 95 573 103 0 0 chr2 37803290 37803368 -212884486 + AluJ/FLAM SINE Alu 2 79 -233 2646 97 10 79 chr2 37803376 37803779 -212884075 + MER51B LTR ERV1 2 376 -1 1540 127 5 0 chr2 37803779 37803999 -212883855 + AluSg/x SINE Alu 74 294 -16 1117 128 6 23 chr2 37804091 37804263 -212883591 + AluSx SINE Alu 3 171 -141 275 294 59 15 chr2 37804263 37804399 -212883455 + MIR SINE MIR 121 262 0 193 279 73 0 chr2 37804413 37804481 -212883373 + MIR SINE MIR 180 252 -10 2266 97 0 3 chr2 37804553 37804851 -212883003 + AluSg SINE Alu 1 297 -13 2138 113 0 13 chr2 37804853 37805162 -212882692 + AluSq SINE Alu 1 305 -8 2468 66 0 10 chr2 37805407 37805708 -212882146 - AluSc SINE Alu -11 298 1 2075 96 10 7 chr2 37805708 37806000 -212881854 - AluSc SINE Alu -15 294 1 1861 129 7 4 chr2 37806101 37806381 -212881473 + AluSx SINE Alu 2 282 -30 258 105 0 0 chr2 37806381 37806419 -212881435 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 275 159 95 0 chr2 37806463 37806526 -212881328 - L1MB8 LINE L1 -245 5933 5865 1907 159 0 7 chr2 37806526 37806834 -212881020 - AluSx SINE Alu -6 306 1 28 61 0 0 chr2 37807408 37807457 -212880397 + AT_rich Low_complexity Low_complexity 1 49 0 180 408 70 13 chr2 37808628 37808785 -212879069 - L2 LINE L2 -262 3010 2845 2177 112 14 0 chr2 37808800 37809094 -212878760 - AluSx SINE Alu -14 298 1 2369 48 0 27 chr2 37809140 37809432 -212878422 - AluY SINE Alu -27 284 1 225 0 0 0 chr2 37809439 37809464 -212878390 + (TA)n Simple_repeat Simple_repeat 2 26 0 226 227 0 72 chr2 37809464 37809561 -212878293 - L1MC4 LINE L1 -1339 6703 6614 328 258 22 22 chr2 37809578 37809667 -212878187 - L1MC4 LINE L1 -1340 6702 6614 328 311 0 0 chr2 37809591 37809681 -212878173 + L1MC4 LINE L1 6614 6703 -1339 1500 128 145 0 chr2 37809823 37810090 -212877764 + AluSx SINE Alu 9 310 0 903 185 11 28 chr2 37810141 37810319 -212877535 + AluJb SINE Alu 16 190 -122 809 222 6 0 chr2 37810319 37810481 -212877373 + AluJo/FRAM SINE Alu 137 299 -3 182 226 0 0 chr2 37810847 37810878 -212876976 + L2 LINE L2 3210 3240 -32 598 214 0 0 chr2 37810948 37811092 -212876762 - AluJo SINE Alu 0 316 173 617 178 0 0 chr2 37811093 37811200 -212876654 - AluJo SINE Alu -205 107 1 296 349 48 0 chr2 37811402 37811485 -212876369 - MIR SINE MIR -57 151 65 2372 69 0 13 chr2 37811552 37811856 -212875998 + AluY SINE Alu 3 302 -9 2270 93 7 0 chr2 37811869 37812159 -212875695 + AluSx SINE Alu 7 298 -14 774 211 7 7 chr2 37812164 37812316 -212875538 + FRAM SINE Alu 1 152 -14 2503 83 3 0 chr2 37812619 37812931 -212874923 + AluSp SINE Alu 1 313 0 202 182 0 0 chr2 37812979 37813012 -212874842 + polypurine Low_complexity Low_complexity 3 35 0 246 90 3 0 chr2 37813177 37813215 -212874639 + L1MB8 LINE L1 5573 5611 -567 2191 132 51 57 chr2 37813263 37813521 -212874333 + L1MB8 LINE L1 5619 5877 -301 1929 116 67 0 chr2 37813521 37813805 -212874049 + AluSx SINE Alu 1 303 -9 2191 132 51 57 chr2 37813805 37813819 -212874035 + L1MB8 LINE L1 5877 5890 -288 1971 143 0 3 chr2 37813819 37814113 -212873741 + AluJb SINE Alu 11 303 -9 2191 132 51 57 chr2 37814113 37814348 -212873506 + L1MB8 LINE L1 5890 6124 -54 1378 162 81 13 chr2 37814348 37814583 -212873271 - AluJo SINE Alu -57 255 5 776 183 14 14 chr2 37814704 37814846 -212873008 + AluJb SINE Alu 137 278 -34 225 0 0 0 chr2 37814849 37814874 -212872980 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2234 97 16 7 chr2 37814883 37815192 -212872662 + AluSx SINE Alu 1 312 0 447 165 110 0 chr2 37815262 37815353 -212872501 + FRAM SINE Alu 73 173 -3 376 287 0 70 chr2 37815480 37815623 -212872231 + L2 LINE L2 3176 3308 -5 453 50 0 0 chr2 37817689 37817749 -212870105 + (CA)n Simple_repeat Simple_repeat 2 61 0 538 208 28 56 chr2 37817766 37817910 -212869944 + L2 LINE L2 3173 3312 -1 2172 72 7 41 chr2 37818089 37818403 -212869451 + AluSp SINE Alu 6 309 0 1207 108 0 12 chr2 37818408 37818575 -212869279 + AluSg/x SINE Alu 126 290 -20 25 0 0 0 chr2 37818623 37818648 -212869206 + AT_rich Low_complexity Low_complexity 1 25 0 2458 74 0 3 chr2 37818754 37819053 -212868801 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 37819053 37819076 -212868778 + (TA)n Simple_repeat Simple_repeat 1 23 0 2164 114 0 29 chr2 37820286 37820602 -212867252 - AluSg SINE Alu -3 307 1 189 309 107 0 chr2 37820941 37821025 -212866829 - L2 LINE L2 -54 3259 3167 2214 114 3 0 chr2 37821457 37821754 -212866100 - AluSx SINE Alu -14 298 1 1012 128 0 0 chr2 37821757 37821890 -212865964 - AluSq/x SINE Alu -180 133 1 234 229 71 0 chr2 37821891 37821961 -212865893 + L1ME LINE L1 5589 5663 -458 1981 142 28 0 chr2 37821984 37822273 -212865581 + AluSx SINE Alu 1 297 -15 1860 158 7 10 chr2 37822628 37822925 -212864929 + AluJb SINE Alu 5 300 -12 2129 122 3 7 chr2 37823095 37823398 -212864456 - AluSc SINE Alu -6 303 2 2374 94 0 0 chr2 37823924 37824221 -212863633 - AluSc SINE Alu -12 297 1 185 91 0 30 chr2 37824523 37824556 -212863298 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 208 304 22 33 chr2 37824639 37824731 -212863123 - MER5A DNA MER1_type -28 161 71 2101 97 47 17 chr2 37824732 37825032 -212862822 - AluSg SINE Alu -1 309 1 890 128 0 28 chr2 37825686 37825827 -212862027 - FLAM_C SINE Alu -6 137 1 22 56 0 0 chr2 37825963 37825999 -212861855 + AT_rich Low_complexity Low_complexity 1 36 0 1804 107 118 11 chr2 37826082 37826352 -212861502 + AluSg SINE Alu 1 299 -11 1607 132 119 4 chr2 37826785 37827063 -212860791 + AluSg1 SINE Alu 1 307 0 1889 172 0 0 chr2 37827146 37827442 -212860412 + AluJb SINE Alu 11 306 -6 39 38 0 0 chr2 37827533 37827586 -212860268 + AT_rich Low_complexity Low_complexity 1 53 0 1427 192 4 4 chr2 37827607 37827862 -212859992 - AluJo SINE Alu -57 255 1 496 215 75 21 chr2 37827902 37828070 -212859784 + L1MC4a LINE L1 6701 6908 -877 2018 133 0 35 chr2 37828087 37828403 -212859451 + AluSx SINE Alu 1 305 -7 1841 212 146 55 chr2 37828429 37829137 -212858717 + L1MC4 LINE L1 7270 8041 -1 25 0 0 0 chr2 37829558 37829583 -212858271 + AT_rich Low_complexity Low_complexity 1 25 0 2372 83 3 0 chr2 37829587 37829887 -212857967 - AluY SINE Alu -10 301 1 2074 125 20 3 chr2 37829925 37830220 -212857634 - AluSg SINE Alu -10 300 1 1020 160 0 0 chr2 37830734 37830890 -212856964 - AluJb SINE Alu -23 289 134 2201 101 7 3 chr2 37830899 37831196 -212856658 - AluSg SINE Alu -12 298 1 1697 137 54 73 chr2 37831254 37831439 -212856415 - AluSq SINE Alu -4 309 131 2295 86 3 3 chr2 37831439 37831729 -212856125 - AluSp SINE Alu -23 290 1 1697 137 54 73 chr2 37831729 37831858 -212855996 - AluSq SINE Alu -182 131 1 1777 183 0 13 chr2 37832016 37832322 -212855532 - AluJb SINE Alu -6 306 5 2387 71 0 0 chr2 37832402 37832698 -212855156 - AluY SINE Alu -10 301 6 540 309 77 22 chr2 37833120 37833486 -212854368 + L1MC/D LINE L1 5372 5757 -2051 25 0 0 0 chr2 37833674 37833699 -212854155 + AT_rich Low_complexity Low_complexity 1 25 0 2311 85 0 20 chr2 37833770 37834076 -212853778 + AluSg SINE Alu 1 300 -10 2009 142 0 3 chr2 37834233 37834528 -212853326 + AluSx SINE Alu 1 294 -18 2150 134 0 3 chr2 37834568 37834875 -212852979 + AluSg SINE Alu 1 306 -4 2064 108 7 30 chr2 37834916 37835213 -212852641 - AluSx SINE Alu -22 290 1 422 328 124 21 chr2 37836118 37836359 -212851495 - L3 LINE CR1 -5 1572 1307 766 112 0 9 chr2 37836360 37836476 -212851378 + MER30B DNA MER1_type 1 115 -75 2174 110 13 10 chr2 37836495 37836804 -212851050 - AluSx SINE Alu -2 310 1 309 162 73 0 chr2 37837673 37837741 -212850113 - MER116 DNA Mariner 0 80 8 1781 154 19 26 chr2 37837814 37838126 -212849728 + AluSx SINE Alu 1 310 -2 922 206 12 0 chr2 37838126 37838291 -212849563 + AluJo/FRAM SINE Alu 134 300 -12 627 340 65 30 chr2 37839708 37840183 -212847671 + L2 LINE L2 2595 3085 -228 2262 101 19 0 chr2 37841202 37841509 -212846345 + AluSp SINE Alu 1 313 0 2130 104 34 3 chr2 37842175 37842472 -212845382 - AluSx SINE Alu -6 306 1 2430 94 0 0 chr2 37843815 37844124 -212843730 + AluSc SINE Alu 1 309 0 1961 129 24 14 chr2 37844139 37844433 -212843421 + AluJo SINE Alu 4 300 -12 1829 126 0 4 chr2 37845357 37845618 -212842236 - AluSx SINE Alu -19 293 34 181 336 39 94 chr2 37845675 37845803 -212842051 - L2 LINE L2 -3 3269 3149 233 275 87 0 chr2 37845915 37845984 -212841870 + L2 LINE L2 3198 3272 0 24 0 0 0 chr2 37846293 37846317 -212841537 + AT_rich Low_complexity Low_complexity 1 24 0 559 270 14 19 chr2 37846632 37846843 -212841011 - L1ME LINE L1 -391 5730 5521 315 276 51 10 chr2 37847107 37847205 -212840649 - L1ME LINE L1 -373 5748 5647 2308 85 3 3 chr2 37847232 37847527 -212840327 - AluSq SINE Alu -18 295 1 200 355 95 71 chr2 37847610 37847906 -212839948 + L2 LINE L2 2966 3268 -4 313 279 25 0 chr2 37847980 37848059 -212839795 + Tigger7 DNA MER2_type 1 81 -258 721 203 0 0 chr2 37848241 37848374 -212839480 + FLAM_A SINE Alu 1 133 0 2198 98 0 3 chr2 37849013 37849299 -212838555 - AluY SINE Alu -26 285 1 2161 94 27 20 chr2 37849534 37849833 -212838021 + AluSc SINE Alu 1 301 -8 414 354 70 74 chr2 37849986 37850906 -212836948 - L2 LINE L2 -419 2895 1980 2329 96 3 0 chr2 37850947 37851248 -212836606 - AluY SINE Alu -9 302 1 601 250 64 67 chr2 37851249 37851577 -212836277 - MER46C DNA MER2_type 0 338 12 21 0 0 0 chr2 37851657 37851678 -212836176 + AT_rich Low_complexity Low_complexity 1 21 0 1695 109 4 35 chr2 37851983 37852240 -212835614 + AluSx SINE Alu 44 292 -20 2336 94 0 7 chr2 37852243 37852551 -212835303 + AluSq SINE Alu 4 309 -4 2055 121 7 7 chr2 37853717 37854015 -212833839 + AluSg SINE Alu 1 298 -12 1707 179 0 0 chr2 37854283 37854557 -212833297 - AluJb SINE Alu -1 311 38 2204 124 0 3 chr2 37854735 37855042 -212832812 - AluSx SINE Alu -6 306 1 271 189 0 0 chr2 37855964 37856017 -212831837 - MER58 DNA MER1_type -1 2419 2367 367 181 53 21 chr2 37856019 37856113 -212831741 + LTR34 LTR ERV1 3 99 -565 821 217 78 90 chr2 37856203 37856444 -212831410 + LTR34 LTR ERV1 136 378 -321 2075 127 7 0 chr2 37856444 37856743 -212831111 + AluJb SINE Alu 1 301 -11 821 217 78 90 chr2 37856743 37856987 -212830867 + LTR34 LTR ERV1 378 695 -4 2222 110 0 7 chr2 37857012 37857312 -212830542 - AluSg SINE Alu -10 300 3 829 230 12 0 chr2 37857315 37857480 -212830374 - MER58A DNA MER1_type 0 168 2 1464 233 34 26 chr2 37857570 37858098 -212829756 + L1MEc LINE L1 628 1159 -5237 1918 148 3 28 chr2 37858324 37858642 -212829212 + AluSx SINE Alu 1 310 -2 3042 156 52 0 chr2 37858767 37859365 -212828489 + L1MA8 LINE L1 5660 6288 -3 186 43 0 0 chr2 37860690 37860713 -212827141 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2246 175 42 28 chr2 37860760 37861257 -212826597 + MLT1D LTR MaLR 1 504 -1 391 354 66 55 chr2 37861269 37861543 -212826311 + L2 LINE L2 2990 3266 -6 2085 103 3 20 chr2 37861649 37861941 -212825913 - AluSx SINE Alu -25 287 1 196 247 78 91 chr2 37862124 37862201 -212825653 + MIR3 SINE MIR 101 176 -32 36 23 0 0 chr2 37863065 37863108 -212824746 + AT_rich Low_complexity Low_complexity 1 43 0 217 188 21 0 chr2 37863420 37863468 -212824386 + (TA)n Simple_repeat Simple_repeat 1 49 0 2223 93 0 0 chr2 37864219 37864497 -212823357 + AluSq SINE Alu 1 278 -35 1901 127 18 0 chr2 37864498 37864813 -212823041 + AluSg SINE Alu 3 322 0 251 260 0 0 chr2 37865176 37865253 -212822601 - L1ME LINE L1 -237 5884 5808 527 317 42 15 chr2 37865335 37865597 -212822257 - L1ME LINE L1 -469 5652 5384 2173 206 124 0 chr2 37865640 37866139 -212821715 + MER68 LTR ERV1 2 562 0 30 83 0 0 chr2 37866163 37866235 -212821619 + AT_rich Low_complexity Low_complexity 1 72 0 643 122 37 19 chr2 37866263 37866370 -212821484 - FLAM_A SINE Alu 0 142 34 195 100 0 0 chr2 37867088 37867118 -212820736 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 814 231 0 0 chr2 37867121 37867268 -212820586 - FRAM SINE Alu -30 146 1 189 107 0 0 chr2 37867683 37867711 -212820143 + (TA)n Simple_repeat Simple_repeat 2 29 0 2286 92 7 0 chr2 37867712 37868016 -212819838 - AluSq SINE Alu -7 306 1 752 253 116 0 chr2 37868493 37868726 -212819128 + MIR SINE MIR 2 261 -1 1628 58 0 0 chr2 37868952 37869143 -212818711 - AluY SINE Alu -120 191 1 530 157 49 20 chr2 37869144 37869169 -212818685 - AluJb SINE Alu -16 296 273 2848 7 0 0 chr2 37869169 37869477 -212818377 + AluYa5 SINE Alu 1 308 -3 530 157 49 20 chr2 37869477 37869553 -212818301 - AluJb SINE Alu -39 273 192 900 169 0 0 chr2 37869553 37869695 -212818159 - AluJo SINE Alu -170 142 1 266 363 18 26 chr2 37869802 37869915 -212817939 + MIR SINE MIR 93 204 -58 227 247 12 24 chr2 37870059 37870144 -212817710 + HsTC2 DNA Tc2 14 97 -1801 680 254 90 25 chr2 37870144 37870423 -212817431 - L1ME LINE L1 -1234 4912 4616 848 314 146 57 chr2 37870436 37871354 -212816500 + L2 LINE L2 2008 3048 -224 2211 115 0 0 chr2 37871354 37871649 -212816205 - AluSq SINE Alu -18 295 1 848 314 146 57 chr2 37871649 37871896 -212815958 + L2 LINE L2 3048 3272 0 2267 84 3 0 chr2 37871996 37872280 -212815574 - AluSg SINE Alu -25 285 1 1287 126 54 9 chr2 37872407 37872629 -212815225 + L1MA3 LINE L1 6067 6298 -7 27 0 0 0 chr2 37872879 37872906 -212814948 + AT_rich Low_complexity Low_complexity 1 27 0 2354 96 0 0 chr2 37872975 37873277 -212814577 - AluSx SINE Alu -10 302 1 734 93 9 7 chr2 37873521 37873737 -212814117 + AluSx SINE Alu 22 280 -30 800 129 0 50 chr2 37873876 37874016 -212813838 + FLAM_C SINE Alu 1 133 0 2143 94 42 3 chr2 37874022 37874308 -212813546 + AluSg SINE Alu 1 297 -13 349 304 93 19 chr2 37874320 37874481 -212813373 + MIR SINE MIR 41 213 -49 212 307 29 7 chr2 37874627 37874716 -212813138 + MIR SINE MIR 45 133 -75 235 290 50 60 chr2 37874971 37875071 -212812783 + MIR SINE MIR 164 262 0 1707 171 7 0 chr2 37876302 37876615 -212811239 + AluJb SINE Alu 1 315 0 25 31 0 0 chr2 37876722 37876754 -212811100 + AT_rich Low_complexity Low_complexity 1 32 0 287 158 72 0 chr2 37877002 37877071 -212810783 - L1ME1 LINE L1 -34 6130 6058 428 183 0 19 chr2 37877077 37877098 -212810756 - MER33 DNA MER1_type -2261 324 304 7807 126 35 19 chr2 37877098 37877447 -212810407 + HSMAR2 DNA Mariner 1 343 -959 2233 112 7 0 chr2 37877447 37877750 -212810104 + AluSx SINE Alu 1 305 -7 7807 126 35 19 chr2 37877750 37878677 -212809177 + HSMAR2 DNA Mariner 343 1298 -4 428 183 0 19 chr2 37878677 37878759 -212809095 - MER33 DNA MER1_type -2281 304 223 329 216 68 14 chr2 37878758 37878832 -212809022 - AluSq/x SINE Alu -177 125 48 * 1160 155 32 5 chr2 37878830 37879090 -212808764 - MER33 DNA MER1_type -89 235 1 2083 215 43 8 chr2 37879091 37879579 -212808275 - L1ME1 LINE L1 -143 6023 5519 354 252 44 57 chr2 37879588 37879747 -212808107 - L1MDb LINE L1 -5001 1428 1115 3125 232 85 16 chr2 37879819 37880810 -212807044 - L1MDb LINE L1 -5283 1324 266 2307 109 0 0 chr2 37881194 37881496 -212806358 + AluSq SINE Alu 1 302 -11 2022 122 48 0 chr2 37881605 37881900 -212805954 + AluSx SINE Alu 1 309 -3 748 199 0 0 chr2 37881900 37882031 -212805823 + FLAM_A SINE Alu 1 131 -2 236 229 92 42 chr2 37882084 37882209 -212805645 + MIR SINE MIR 74 205 -57 429 224 46 33 chr2 37882694 37882846 -212805008 - MER104 DNA Tc2 0 180 27 1887 172 0 0 chr2 37883026 37883322 -212804532 - AluJb SINE Alu -16 296 1 23 0 0 0 chr2 37883460 37883483 -212804371 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 37884688 37884708 -212803146 + (A)n Simple_repeat Simple_repeat 1 20 0 1729 164 0 7 chr2 37884736 37885011 -212802843 - AluJo SINE Alu -20 292 20 1914 129 3 26 chr2 37885596 37885899 -212801955 + AluSc SINE Alu 1 296 -13 2465 89 0 0 chr2 37885913 37886216 -212801638 + AluSc SINE Alu 1 303 -6 2411 97 0 0 chr2 37886566 37886877 -212800977 - AluSx SINE Alu -1 311 1 3975 181 15 24 chr2 37887103 37887843 -212800011 - MER44D DNA MER2_type 0 605 1 181 265 82 0 chr2 37888706 37888755 -212799099 + L2 LINE L2 3209 3261 -11 25 65 0 0 chr2 37888957 37889003 -212798851 + AT_rich Low_complexity Low_complexity 1 46 0 2331 64 48 0 chr2 37889022 37889317 -212798537 - AluSp SINE Alu -3 310 2 2223 106 7 0 chr2 37889318 37889620 -212798234 - AluSq SINE Alu -9 304 1 207 202 12 60 chr2 37890077 37890161 -212797693 + (TTTA)n Simple_repeat Simple_repeat 4 83 0 355 319 67 7 chr2 37890206 37890341 -212797513 + MIR3 SINE MIR 48 190 -18 780 181 0 8 chr2 37890468 37890601 -212797253 - FLAM_C SINE Alu -11 132 1 225 65 0 0 chr2 37891846 37891877 -212795977 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 618 191 18 0 chr2 37892569 37892679 -212795175 + FLAM_A SINE Alu 3 114 -19 24 67 0 0 chr2 37892704 37892749 -212795105 + AT_rich Low_complexity Low_complexity 1 45 0 566 311 70 25 chr2 37892913 37893154 -212794700 + MIR SINE MIR 8 259 -3 22 0 0 0 chr2 37893672 37893694 -212794160 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 37893875 37893905 -212793949 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 37894189 37894218 -212793636 + AT_rich Low_complexity Low_complexity 1 29 0 381 43 0 0 chr2 37894231 37894238 -212793616 + (TG)n Simple_repeat Simple_repeat 1 54 0 381 43 0 0 chr2 37894238 37894285 -212793569 + (TG)n Simple_repeat Simple_repeat 2 48 0 2139 115 20 0 chr2 37894302 37894597 -212793257 - AluSx SINE Alu -11 301 1 300 333 137 24 chr2 37895148 37895316 -212792538 + MIR3 SINE MIR 21 207 -1 217 228 35 0 chr2 37895942 37895999 -212791855 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 2119 117 0 10 chr2 37896982 37897281 -212790573 + AluSx SINE Alu 1 296 -16 353 268 268 0 chr2 37897370 37897527 -212790327 + MIR SINE MIR 2 200 -62 1643 176 3 42 chr2 37897628 37897935 -212789919 - AluJo SINE Alu -15 297 3 267 194 60 0 chr2 37898004 37898071 -212789783 - MIR SINE MIR 0 262 192 2257 117 0 7 chr2 37898644 37898951 -212788903 - AluSx SINE Alu -7 305 1 1093 153 67 24 chr2 37899117 37899326 -212788528 - AluJo SINE Alu -9 303 86 1880 144 39 0 chr2 37900162 37900446 -212787408 - AluSx SINE Alu -17 295 1 755 292 49 21 chr2 37901016 37901259 -212786595 + MIR SINE MIR 13 262 0 1931 152 0 14 chr2 37901714 37902011 -212785843 - AluSx SINE Alu -19 293 1 271 387 0 19 chr2 37902073 37902179 -212785675 + L2 LINE L2 3150 3253 -19 2089 137 0 9 chr2 37902324 37902639 -212785215 + AluSx SINE Alu 1 312 0 193 307 148 0 chr2 37902911 37903012 -212784842 + L2 LINE L2 3190 3305 -8 22 0 0 0 chr2 37904552 37904574 -212783280 + AT_rich Low_complexity Low_complexity 1 22 0 2252 104 0 7 chr2 37904738 37905037 -212782817 - AluSx SINE Alu -15 297 1 541 280 109 33 chr2 37905746 37905957 -212781897 + MIR SINE MIR 15 241 -21 192 245 19 38 chr2 37905923 37905968 -212781886 + L2 LINE L2 3253 3298 -15 * 306 0 0 0 chr2 37905968 37906002 -212781852 + (CAT)n Simple_repeat Simple_repeat 1 34 0 240 363 108 0 chr2 37906019 37906121 -212781733 - MIR SINE MIR -69 139 27 2268 98 0 10 chr2 37906514 37906821 -212781033 - AluSg SINE Alu -6 304 1 806 220 78 5 chr2 37907156 37907347 -212780507 + L1ME1 LINE L1 37 241 -6155 * 2697 240 75 7 chr2 37907344 37908220 -212779634 + L1ME1 LINE L1 3059 3994 -2221 1267 106 0 0 chr2 37908220 37908381 -212779473 - AluSx SINE Alu -151 161 1 279 247 25 0 chr2 37908382 37908463 -212779391 - L1MD2 LINE L1 -145 6214 6132 * 3017 200 62 39 chr2 37908446 37908877 -212778977 + L1ME1 LINE L1 4510 4930 -1305 2471 60 3 7 chr2 37908877 37909179 -212778675 + AluY SINE Alu 1 301 -10 3017 200 62 39 chr2 37909179 37910232 -212777622 + L1ME1 LINE L1 4930 6031 -204 23 33 0 0 chr2 37910231 37910261 -212777593 + AT_rich Low_complexity Low_complexity 1 30 0 * 253 190 350 30 chr2 37911018 37911118 -212776736 + L2 LINE L2 3182 3313 0 1120 216 41 25 chr2 37911150 37911469 -212776385 + MLT1C LTR MaLR 144 467 0 2149 109 3 17 chr2 37912143 37912445 -212775409 - AluSx SINE Alu -14 298 1 261 276 23 46 chr2 37912859 37912946 -212774908 + MIR SINE MIR 3 87 -175 200 378 0 31 chr2 37913052 37913150 -212774704 - MIR SINE MIR -148 114 20 349 323 126 19 chr2 37913572 37913835 -212774019 + L2 LINE L2 2109 2399 -915 2063 284 163 14 chr2 37914806 37915731 -212772123 - L2 LINE L2 -234 3079 2004 305 310 92 14 chr2 37915885 37916027 -212771827 - L2 LINE L2 -1341 1973 1821 953 43 0 0 chr2 37916064 37916181 -212771673 - L1PA5 LINE L1 -6 6148 6032 1219 261 160 32 chr2 37916327 37916894 -212770960 + HAL1 LINE L1 220 876 -1631 2219 105 0 31 chr2 37916894 37917217 -212770637 - AluSq SINE Alu 0 313 1 1219 261 160 32 chr2 37917217 37917273 -212770581 + HAL1 LINE L1 876 923 -1584 2814 96 76 5 chr2 37917284 37917730 -212770124 + MER9 LTR ERVK 34 511 0 581 275 18 42 chr2 37917817 37917984 -212769870 - L2 LINE L2 -2047 1267 1105 781 207 130 49 chr2 37919638 37919923 -212767931 + L2 LINE L2 2305 2612 -702 220 321 107 9 chr2 37920106 37920218 -212767636 + MIR SINE MIR 81 203 -59 1928 230 49 28 chr2 37920530 37921059 -212766795 - MLT1F LTR MaLR -2 593 1 2204 122 0 13 chr2 37921350 37921654 -212766200 + AluSx SINE Alu 1 300 -12 243 267 35 0 chr2 37921692 37921778 -212766076 - MLT1K LTR MaLR 0 588 500 303 276 41 16 chr2 37921836 37921959 -212765895 - MLT1K LTR MaLR -186 402 277 407 267 230 7 chr2 37922215 37922350 -212765504 + MER5A DNA MER1_type 24 188 -1 356 312 206 41 chr2 37922712 37923148 -212764706 - L2 LINE L2 -568 2746 2239 1791 155 0 21 chr2 37923343 37923659 -212764195 - AluJo SINE Alu 0 310 1 2373 105 0 0 chr2 37924122 37924435 -212763419 + AluSq SINE Alu 1 313 0 1283 160 0 63 chr2 37925837 37925880 -212761974 + AluJo SINE Alu 37 81 -231 2428 87 3 0 chr2 37925880 37926180 -212761674 + AluSp SINE Alu 1 301 -12 1283 160 0 63 chr2 37926180 37926373 -212761481 + AluJo SINE Alu 81 258 -54 23 0 0 0 chr2 37926377 37926400 -212761454 + AT_rich Low_complexity Low_complexity 1 23 0 607 106 34 28 chr2 37927162 37927341 -212760513 + (TA)n Simple_repeat Simple_repeat 1 180 0 1873 178 0 0 chr2 37927701 37927993 -212759861 + AluJo SINE Alu 1 292 -20 869 160 0 0 chr2 37928050 37928181 -212759673 + FLAM_C SINE Alu 1 131 -12 2288 101 0 0 chr2 37928504 37928792 -212759062 - AluSc SINE Alu -21 288 1 233 216 0 0 chr2 37928961 37929012 -212758842 + GA-rich Low_complexity Low_complexity 1 51 0 1060 204 38 5 chr2 37929058 37929269 -212758585 - MER20 DNA MER1_type -1 218 1 1948 148 13 10 chr2 37929497 37929801 -212758053 + AluSx SINE Alu 1 305 -7 593 313 70 14 chr2 37931939 37932153 -212755701 - L3 LINE CR1 -11 1566 1341 230 246 15 31 chr2 37932160 37932225 -212755629 - L3 LINE CR1 -941 636 573 445 219 163 0 chr2 37932606 37932729 -212755125 - MER5B DNA MER1_type -34 144 2 27 49 0 0 chr2 37932837 37932878 -212754976 + AT_rich Low_complexity Low_complexity 1 41 0 2182 130 0 0 chr2 37932878 37933171 -212754683 + AluSx SINE Alu 1 293 -19 282 56 0 0 chr2 37933172 37933208 -212754646 + (TA)n Simple_repeat Simple_repeat 1 36 0 198 0 0 0 chr2 37933207 37933229 -212754625 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 721 179 15 22 chr2 37933603 37933737 -212754117 + FLAM_A SINE Alu 1 133 0 2585 140 110 10 chr2 37934460 37934980 -212752874 + L1MB8 LINE L1 5607 6178 0 757 175 25 25 chr2 37935110 37935270 -212752584 + MLT1D LTR MaLR 346 505 0 258 319 26 9 chr2 37935804 37935920 -212751934 + L2 LINE L2 2412 2529 -785 471 217 212 29 chr2 37936032 37936285 -212751569 + L1MC4 LINE L1 6959 7256 -728 * 472 243 163 80 chr2 37936278 37936818 -212751036 + L1MC5 LINE L1 7260 7783 -178 1712 177 0 7 chr2 37936818 37937089 -212750765 + AluJo SINE Alu 24 292 -20 472 243 163 80 chr2 37937089 37937225 -212750629 + L1MC5 LINE L1 7783 7906 -55 233 268 14 14 chr2 37937414 37937479 -212750375 + (CATA)n Simple_repeat Simple_repeat 2 66 -73 465 215 323 0 chr2 37937479 37937609 -212750245 + MER45A DNA AcHobo 4 175 -3 233 268 14 14 chr2 37937609 37937681 -212750173 + (CATA)n Simple_repeat Simple_repeat 65 139 0 198 0 0 0 chr2 37937841 37937863 -212749991 + (TG)n Simple_repeat Simple_repeat 1 22 0 2470 85 0 0 chr2 37938028 37938333 -212749521 - AluSq SINE Alu -8 305 1 1239 259 107 63 chr2 37938482 37938694 -212749160 - L1MC4 LINE L1 -17 8025 7824 2030 135 0 3 chr2 37938694 37939019 -212748835 + AluSx SINE Alu 1 324 0 1239 259 107 63 chr2 37939019 37939152 -212748702 - L1MC4 LINE L1 -218 7824 7698 1671 209 0 3 chr2 37939152 37939458 -212748396 - AluJo SINE Alu -7 305 1 1239 259 107 63 chr2 37939458 37939902 -212747952 - L1MC4 LINE L1 -344 7698 7199 2664 114 25 39 chr2 37940051 37940489 -212747365 + MSTB1 LTR MaLR 1 432 0 808 252 122 28 chr2 37941040 37941401 -212746453 - L1ME3 LINE L1 -211 5951 5557 2249 120 7 0 chr2 37941599 37941900 -212745954 + AluSx SINE Alu 1 303 -9 2269 120 0 0 chr2 37942701 37943001 -212744853 + AluSq SINE Alu 1 300 -13 413 303 144 64 chr2 37943090 37943413 -212744441 + L2 LINE L2 2825 3189 -83 2198 113 7 0 chr2 37943413 37943705 -212744149 - AluSx SINE Alu -18 294 1 413 303 144 64 chr2 37943705 37943790 -212744064 + L2 LINE L2 3189 3266 -6 368 284 121 37 chr2 37944253 37944443 -212743411 + MIR SINE MIR 23 228 -34 1645 194 61 27 chr2 37944461 37944905 -212742949 + L1ME2 LINE L1 5696 6154 -10 1836 111 9 79 chr2 37944917 37945233 -212742621 - AluSx SINE Alu -18 294 1 2774 126 33 10 chr2 37945684 37946169 -212741685 + L1MB3 LINE L1 5686 6181 -2 745 124 0 0 chr2 37946227 37946340 -212741514 - AluSp/q SINE Alu -3 310 198 1939 130 7 33 chr2 37946409 37946716 -212741138 + AluJb SINE Alu 1 299 -13 306 0 0 0 chr2 37946716 37946750 -212741104 + (TA)n Simple_repeat Simple_repeat 2 35 0 648 294 56 36 chr2 37946871 37947208 -212740646 + MLT1I LTR MaLR 63 406 -3 442 314 71 35 chr2 37947209 37947580 -212740274 + L1MC4a LINE L1 4489 4884 -1262 1298 130 39 0 chr2 37947580 37947810 -212740044 - L1MB4 LINE L1 -2 6178 5940 442 314 71 35 chr2 37947810 37947929 -212739925 + L1MC4a LINE L1 4884 4997 -1149 2354 101 3 10 chr2 37948052 37948359 -212739495 + AluSq SINE Alu 2 306 -7 356 308 161 22 chr2 37948447 37948738 -212739116 + L1MC4a LINE L1 5259 5586 -2199 1183 153 0 110 chr2 37948912 37949166 -212738688 + AluJo SINE Alu 86 311 -1 319 205 0 24 chr2 37949187 37949270 -212738584 + L1MC4a LINE L1 5770 5850 -1958 2316 75 0 47 chr2 37949879 37950197 -212737657 - AluY SINE Alu -6 305 3 617 285 167 11 chr2 37950242 37950523 -212737331 + L3 LINE CR1 1242 1566 -11 2079 128 0 36 chr2 37950709 37951036 -212736818 - AluSx SINE Alu 0 312 1 957 167 39 0 chr2 37951060 37951216 -212736638 - AluJb SINE Alu -15 297 136 1964 144 3 3 chr2 37951767 37952079 -212735775 + AluSx SINE Alu 1 312 0 1773 177 13 0 chr2 37952093 37952392 -212735462 + AluJb SINE Alu 1 303 -9 1898 142 3 29 chr2 37952863 37953173 -212734681 + AluJb SINE Alu 1 302 -10 31 74 0 21 chr2 37954394 37954438 -212733416 + AT_rich Low_complexity Low_complexity 1 44 -49 2287 96 7 0 chr2 37954438 37954729 -212733125 - AluSx SINE Alu -19 293 1 31 74 0 21 chr2 37954729 37954779 -212733075 + AT_rich Low_complexity Low_complexity 44 93 0 35 24 0 0 chr2 37955011 37955053 -212732801 + AT_rich Low_complexity Low_complexity 1 42 0 2198 34 45 8 chr2 37955105 37955373 -212732481 + AluY SINE Alu 33 310 -1 2050 147 0 3 chr2 37955518 37955817 -212732037 + AluSx SINE Alu 1 298 -14 2570 56 0 0 chr2 37955819 37956123 -212731731 + AluY SINE Alu 1 304 -7 183 319 77 33 chr2 37956276 37956367 -212731487 - L2 LINE L2 -37 3235 3141 180 0 0 0 chr2 37956455 37956475 -212731379 + (T)n Simple_repeat Simple_repeat 1 20 0 195 282 107 10 chr2 37957188 37957291 -212730563 + MIR SINE MIR 124 236 -26 2338 90 0 7 chr2 37957723 37958024 -212729830 + AluSg SINE Alu 1 299 -11 1790 185 0 3 chr2 37958107 37958405 -212729449 - AluJb SINE Alu -15 297 1 1991 141 7 0 chr2 37958808 37959105 -212728749 - AluJb SINE Alu -13 299 1 2237 87 7 3 chr2 37959110 37959396 -212728458 - AluSc SINE Alu -22 287 1 278 265 20 48 chr2 37959403 37959550 -212728304 - L1ME LINE L1 -299 5822 5680 1641 158 4 4 chr2 37959566 37959825 -212728029 - AluJb SINE Alu -13 299 41 2323 100 6 0 chr2 37959837 37960148 -212727706 - AluSp SINE Alu 0 313 1 804 285 50 50 chr2 37960188 37960671 -212727183 + MLT1G3 LTR MaLR 13 560 -7 447 221 19 19 chr2 37960683 37960787 -212727067 + MIR3 SINE MIR 73 176 -32 2417 106 0 0 chr2 37961514 37961825 -212726029 + AluSq SINE Alu 3 313 0 768 313 90 36 chr2 37961965 37962579 -212725275 + L2 LINE L2 2463 3130 -142 2291 110 3 0 chr2 37962579 37962879 -212724975 - AluSx SINE Alu -11 301 1 768 313 90 36 chr2 37962879 37963016 -212724838 + L2 LINE L2 3130 3258 -14 425 141 16 0 chr2 37963505 37963569 -212724285 + LTR19A LTR ERV1 1 65 -421 46821 79 9 8 chr2 37963570 37964932 -212722922 + HERVFH19I LTR ERV1 1493 2852 -4867 2036 122 3 7 chr2 37964932 37965239 -212722615 - AluSx SINE Alu 0 306 1 46821 79 9 8 chr2 37965239 37967148 -212720706 + HERVFH19I LTR ERV1 2852 4758 -2961 2314 94 7 0 chr2 37967148 37967447 -212720407 + AluSg SINE Alu 1 301 -9 46821 79 9 8 chr2 37967447 37970292 -212717562 + HERVFH19I LTR ERV1 4758 7616 -103 1805 171 0 13 chr2 37970460 37970770 -212717084 - AluJo SINE Alu -6 306 1 528 236 93 28 chr2 37971999 37972215 -212715639 - L1ME LINE L1 -668 5498 5269 756 163 7 15 chr2 37972306 37972441 -212715413 - FLAM_C SINE Alu -4 139 6 2260 88 7 0 chr2 37972668 37972965 -212714889 + AluSg SINE Alu 1 299 -11 23 0 0 0 chr2 37973583 37973606 -212714248 + AT_rich Low_complexity Low_complexity 1 23 0 1669 166 0 53 chr2 37973630 37973872 -212713982 - AluJb SINE Alu -9 303 81 2274 100 3 3 chr2 37973872 37974171 -212713683 + AluSg SINE Alu 1 299 -11 1669 166 0 53 chr2 37974171 37974248 -212713606 - AluJb SINE Alu -231 81 1 271 228 49 54 chr2 37976952 37976970 -212710884 - L1ME LINE L1 -2893 3253 3236 1863 160 0 13 chr2 37976970 37977270 -212710584 - AluJb SINE Alu -16 296 1 271 228 49 54 chr2 37977270 37977435 -212710419 - L1ME LINE L1 -2910 3236 3071 368 316 47 60 chr2 37977618 37977784 -212710070 - HAL1b LINE L1 -875 473 306 2224 94 20 7 chr2 37977784 37978081 -212709773 + AluSg SINE Alu 1 301 -9 368 316 47 60 chr2 37978081 37978278 -212709576 - HAL1b LINE L1 -1042 306 115 1297 128 13 49 chr2 37978280 37978439 -212709415 - MER2 DNA MER2_type 0 345 195 1935 167 0 3 chr2 37978439 37978751 -212709103 + AluJb SINE Alu 1 311 -1 1297 128 13 49 chr2 37978751 37978816 -212709038 - MER2 DNA MER2_type -150 195 129 4677 120 12 140 chr2 37978816 37979414 -212708440 + Tigger3(Golem) DNA MER2_type 2 675 -2354 1941 157 10 3 chr2 37979414 37979719 -212708135 - AluJb SINE Alu -5 307 1 216 0 0 0 chr2 37979719 37979743 -212708111 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 485 114 114 0 chr2 37979743 37979813 -212708041 - AluJb SINE Alu -31 281 204 4677 120 12 140 chr2 37979813 37979979 -212707875 + Tigger3(Golem) DNA MER2_type 673 859 -2170 2371 106 0 0 chr2 37979979 37980280 -212707574 - AluSx SINE Alu -11 301 1 4677 120 12 140 chr2 37980280 37980589 -212707265 + Tigger3(Golem) DNA MER2_type 859 1206 -1823 2288 89 40 3 chr2 37980589 37980891 -212706963 - AluSq SINE Alu 0 313 1 4677 120 12 140 chr2 37980891 37981175 -212706679 + Tigger3(Golem) DNA MER2_type 1206 3029 0 851 174 0 0 chr2 37981175 37981306 -212706548 - MER2 DNA MER2_type -214 131 1 3082 23 12 3 chr2 37982156 37982500 -212705354 - L1PA4 LINE L1 -3 6152 5806 723 97 117 0 chr2 37982886 37982989 -212704865 + AluSq/x SINE Alu 2 116 -196 4746 165 84 60 chr2 37984374 37985431 -212702423 + Tigger6a DNA MER2_type 2 1083 0 3402 155 28 48 chr2 37985804 37986634 -212701220 + L1MB5 LINE L1 5009 5821 -353 2138 54 43 4 chr2 37986634 37986910 -212700944 + AluY SINE Alu 1 287 -24 3402 155 28 48 chr2 37986910 37987057 -212700797 + L1MB5 LINE L1 5821 5969 -205 698 314 147 33 chr2 37987087 37987119 -212700735 + L2 LINE L2 2034 2061 -1253 1820 141 30 27 chr2 37987119 37987418 -212700436 - AluSx SINE Alu -12 300 1 698 314 147 33 chr2 37987418 37987955 -212699899 + L2 LINE L2 2061 2668 -646 879 194 56 18 chr2 37987956 37988175 -212699679 - L1MB4 LINE L1 -6 6174 5973 1288 90 28 6 chr2 37988175 37988353 -212699501 - AluJo SINE Alu -9 303 122 2943 141 28 10 chr2 37988353 37988851 -212699003 - L1MB4 LINE L1 -209 5971 5465 2515 64 6 0 chr2 37988882 37989193 -212698661 + AluSp SINE Alu 1 313 0 1056 241 26 133 chr2 37989198 37989403 -212698451 + L2 LINE L2 1835 2060 -1212 2287 88 0 3 chr2 37989403 37989697 -212698157 - AluSq SINE Alu -18 295 3 1056 241 26 133 chr2 37989697 37990112 -212697742 + L2 LINE L2 2060 3049 -223 1611 120 0 0 chr2 37990581 37990806 -212697048 + AluSc SINE Alu 84 308 -1 701 258 127 64 chr2 37990810 37991327 -212696527 - L2 LINE L2 -164 3149 2598 261 0 0 0 chr2 37991748 37991777 -212696077 + (CCG)n Simple_repeat Simple_repeat 1 29 0 307 227 140 22 chr2 37992157 37992254 -212695600 - MIR SINE MIR -55 153 46 203 217 193 36 chr2 37992598 37992681 -212695173 - MIR SINE MIR -138 124 29 2210 103 3 7 chr2 37992748 37993049 -212694805 + AluSx SINE Alu 1 300 -12 2051 136 0 0 chr2 37993697 37993983 -212693871 - AluSx SINE Alu -26 286 1 333 293 93 20 chr2 37993985 37994135 -212693719 + MERVL LTR ERVL 513 673 -5091 253 333 70 19 chr2 37994188 37994344 -212693510 + MERVL LTR ERVL 827 990 -4774 2275 82 34 0 chr2 37994406 37994698 -212693156 + AluSc SINE Alu 1 302 -7 253 309 0 12 chr2 37994806 37994887 -212692967 + MERVL LTR ERVL 1256 1335 -4429 430 304 113 0 chr2 37995041 37995245 -212692609 + MERVL LTR ERVL 3947 4173 -1312 646 185 35 15 chr2 37995607 37995774 -212692080 + MLT1A1 LTR MaLR 2 210 -155 2052 121 7 0 chr2 37995774 37996161 -212691693 + AluSx SINE Alu 1 389 0 646 185 35 15 chr2 37996161 37996216 -212691638 + MLT1A1 LTR MaLR 210 262 -103 1086 285 61 33 chr2 37996216 37996644 -212691210 + L2 LINE L2 2825 3264 -49 1024 240 0 5 chr2 37996648 37996848 -212691006 + MER58A DNA MER1_type 26 224 0 480 244 70 35 chr2 37996864 37997036 -212690818 - L2 LINE L2 -1204 2110 1933 749 171 17 86 chr2 37997216 37997265 -212690589 - L1MB5 LINE L1 0 6174 6123 2473 76 0 3 chr2 37997265 37997568 -212690286 - AluSq SINE Alu -11 302 1 749 171 17 86 chr2 37997568 37997693 -212690161 - L1MB5 LINE L1 -51 6123 6012 33 56 0 0 chr2 37997743 37997797 -212690057 + AT_rich Low_complexity Low_complexity 1 54 0 413 297 118 9 chr2 37997812 37998041 -212689813 - L1MB5 LINE L1 -345 5817 5564 4133 268 52 53 chr2 37998041 37998190 -212689664 - L1MEc LINE L1 -4418 1978 1830 1997 121 3 34 chr2 37998190 37998487 -212689367 - AluSq SINE Alu -25 288 1 4133 268 52 53 chr2 37998487 37998675 -212689179 - L1MEc LINE L1 -4566 1830 1643 2360 75 0 14 chr2 37998675 37998969 -212688885 - AluY SINE Alu -21 290 1 4133 268 52 53 chr2 37998969 37999145 -212688709 - L1MEc LINE L1 -4753 1643 1468 2841 16 0 0 chr2 37999145 37999456 -212688398 - AluYa5 SINE Alu 0 311 1 4133 268 52 53 chr2 37999456 38000781 -212687073 - L1MEc LINE L1 -4928 1468 140 377 244 12 110 chr2 38000795 38000869 -212686985 - L1MB5 LINE L1 -753 5393 5342 1656 168 14 31 chr2 38000869 38001161 -212686693 - AluJo SINE Alu -22 290 4 377 244 12 110 chr2 38001161 38001250 -212686604 - L1MB5 LINE L1 -804 5342 5246 756 193 6 11 chr2 38001258 38001439 -212686415 + CT-rich Low_complexity Low_complexity 1 180 0 2111 124 10 0 chr2 38001439 38001729 -212686125 - AluSx SINE Alu -19 293 1 2299 110 0 3 chr2 38001812 38002122 -212685732 + AluSx SINE Alu 1 309 -3 234 176 72 24 chr2 38002611 38002736 -212685118 + (TTA)n Simple_repeat Simple_repeat 1 131 0 1689 82 137 4 chr2 38003038 38003293 -212684561 - AluSx SINE Alu -23 289 1 242 320 48 0 chr2 38003705 38003808 -212684046 + L1ME4a LINE L1 5799 5906 -215 270 285 89 0 chr2 38003832 38003955 -212683899 + L1ME4a LINE L1 5961 6094 -27 307 356 104 0 chr2 38004168 38004283 -212683571 + MIR SINE MIR 20 146 -116 2238 105 0 19 chr2 38004316 38004630 -212683224 - AluSg1 SINE Alu -1 308 1 302 252 155 32 chr2 38004861 38005016 -212682838 + MLT1J LTR MaLR 3 176 -335 2220 107 0 3 chr2 38005021 38005312 -212682542 + AluSx SINE Alu 1 290 -22 1537 107 243 8 chr2 38005352 38005595 -212682259 + AluSg SINE Alu 1 300 0 2320 78 0 13 chr2 38005794 38006101 -212681753 + AluSc SINE Alu 1 303 -6 322 241 51 58 chr2 38006106 38006243 -212681611 + MLT1J LTR MaLR 374 509 -2 1372 151 5 14 chr2 38006888 38007107 -212680747 - AluJb SINE Alu -15 297 81 361 235 0 12 chr2 38007107 38007188 -212680666 + MER103 DNA DNA 77 156 -10 2338 92 0 0 chr2 38007351 38007645 -212680209 - AluSq SINE Alu -19 294 1 2225 105 0 0 chr2 38007656 38007990 -212679864 - AluSx SINE Alu 0 334 1 2492 246 109 21 chr2 38008059 38009062 -212678792 + L2 LINE L2 1975 3062 -251 1167 205 142 8 chr2 38009062 38009330 -212678524 - AluY SINE Alu -2 309 6 318 289 52 60 chr2 38009385 38009617 -212678237 + L2 LINE L2 3083 3312 -1 1308 197 99 0 chr2 38010437 38010792 -212677062 - MER3 DNA MER1_type 0 2624 2235 493 194 0 86 chr2 38010794 38010933 -212676921 - MER3 DNA MER1_type -42 167 41 582 231 186 0 chr2 38010940 38011096 -212676758 + MIR SINE MIR 62 246 -16 2329 97 10 0 chr2 38011098 38011397 -212676457 - AluSx SINE Alu -10 302 1 238 220 0 0 chr2 38011406 38011456 -212676398 + (TTA)n Simple_repeat Simple_repeat 3 52 0 283 224 42 106 chr2 38011501 38011705 -212676149 + MLT1L LTR MaLR 1 267 -348 370 145 87 0 chr2 38011995 38012064 -212675790 + L1MA9 LINE L1 5833 5907 -384 1213 169 61 0 chr2 38012066 38012279 -212675575 + AluJb SINE Alu 87 312 0 1383 188 33 66 chr2 38012285 38012678 -212675176 + L1MA9 LINE L1 5894 6273 -39 1177 157 29 10 chr2 38012888 38013057 -212674797 - AluSq SINE Alu -21 292 117 186 118 0 0 chr2 38013057 38013091 -212674763 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1891 147 7 0 chr2 38013091 38013370 -212674484 - AluSx SINE Alu -28 284 4 1177 157 29 10 chr2 38013091 38013125 -212674729 - AluSq SINE Alu -196 117 85 297 303 33 16 chr2 38013387 38013509 -212674345 + MIR SINE MIR 120 243 -19 21 36 0 0 chr2 38013627 38013655 -212674199 + AT_rich Low_complexity Low_complexity 1 28 0 2062 109 14 0 chr2 38013791 38014095 -212673759 - AluY SINE Alu 0 308 1 530 338 192 25 chr2 38015096 38015439 -212672415 + L3 LINE CR1 134 419 -1158 1920 168 0 0 chr2 38015439 38015743 -212672111 + AluSx SINE Alu 1 304 -8 530 338 192 25 chr2 38015743 38015988 -212671866 + L3 LINE CR1 419 820 -757 1999 121 7 7 chr2 38016222 38016519 -212671335 - AluJo SINE Alu -15 297 1 425 262 153 70 chr2 38016660 38016889 -212670965 + L3 LINE CR1 1327 1574 -3 1219 137 0 0 chr2 38017091 38017266 -212670588 - AluSx SINE Alu -12 300 126 503 55 55 0 chr2 38017266 38017339 -212670515 - MADE1 DNA Mariner -3 77 1 962 111 0 0 chr2 38017339 38017465 -212670389 - AluSx SINE Alu -186 127 2 769 167 0 24 chr2 38017738 38017864 -212669990 + FLAM_C SINE Alu 2 124 -9 203 161 0 0 chr2 38018380 38018411 -212669443 + (TG)n Simple_repeat Simple_repeat 2 32 0 2195 116 0 0 chr2 38018487 38018781 -212669073 - AluSx SINE Alu -18 294 1 1642 87 0 9 chr2 38019471 38019689 -212668165 + AluSc SINE Alu 84 299 -10 302 264 165 0 chr2 38019827 38019948 -212667906 - MIR SINE MIR -46 216 76 2335 102 0 3 chr2 38020272 38020575 -212667279 + AluSx SINE Alu 1 302 -10 1906 156 0 14 chr2 38021447 38021742 -212666112 + AluJb SINE Alu 1 291 -21 527 228 277 0 chr2 38021892 38022094 -212665760 + MIR SINE MIR 5 262 0 21 36 0 0 chr2 38022619 38022647 -212665207 + AT_rich Low_complexity Low_complexity 1 28 0 276 275 0 0 chr2 38023994 38024054 -212663800 + MIR SINE MIR 38 97 -111 1793 193 113 16 chr2 38024089 38024540 -212663314 - MER50 LTR ERV1 0 734 240 273 263 6 103 chr2 38024782 38024938 -212662916 + MLT1J LTR MaLR 325 465 -46 331 313 38 31 chr2 38025263 38025423 -212662431 - MIR SINE MIR -5 257 97 1303 283 65 18 chr2 38025425 38025917 -212661937 - LTR38 LTR ERV1 -41 515 1 318 341 77 35 chr2 38026293 38026463 -212661391 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 38026639 38026724 -212661130 + CT-rich Low_complexity Low_complexity 5 85 0 2066 148 51 26 chr2 38026867 38027219 -212660635 - MER46B DNA MER2_type 0 236 1 231 263 126 0 chr2 38027395 38027490 -212660364 - MIR SINE MIR -56 206 100 1994 133 13 10 chr2 38028415 38028717 -212659137 + AluSx SINE Alu 3 305 -7 1121 127 29 0 chr2 38028855 38029028 -212658826 - AluSq SINE Alu -2 311 134 2145 127 7 0 chr2 38029028 38029327 -212658527 - AluSx SINE Alu -8 304 4 401 265 84 96 chr2 38029381 38029949 -212657905 + L1MEd LINE L1 713 1312 -4929 2214 92 14 0 chr2 38029949 38030243 -212657611 + AluY SINE Alu 1 298 -13 401 265 84 96 chr2 38030243 38030311 -212657543 + L1MEd LINE L1 1312 1379 -4862 378 197 28 0 chr2 38030472 38030543 -212657311 + U6 snRNA snRNA 1 73 -34 652 188 109 30 chr2 38030903 38031068 -212656786 - MER5B DNA MER1_type 0 178 1 385 188 150 53 chr2 38031635 38031768 -212656086 - MIR SINE MIR -12 250 105 1235 166 0 5 chr2 38031992 38032223 -212655631 - AluJb SINE Alu 0 315 86 1808 103 64 67 chr2 38032226 38032538 -212655316 - AluJb SINE Alu -1 311 1 1338 250 152 42 chr2 38032540 38033305 -212654549 + L2 LINE L2 2443 3308 -5 2081 93 65 4 chr2 38033639 38033918 -212653936 - AluSc SINE Alu -13 296 1 1888 117 3 96 chr2 38034786 38035120 -212652734 + AluSx SINE Alu 1 303 -9 734 233 146 31 chr2 38035748 38036036 -212651818 + L2 LINE L2 2988 3308 -5 358 326 8 0 chr2 38036036 38036165 -212651689 - MIR3 SINE MIR -71 137 8 214 125 21 21 chr2 38037446 38037494 -212650360 + (CCG)n Simple_repeat Simple_repeat 2 49 0 24 53 0 0 chr2 38037789 38037827 -212650027 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 38037859 38037887 -212649967 + GC_rich Low_complexity Low_complexity 1 28 0 270 0 0 0 chr2 38038009 38038039 -212649815 + (CA)n Simple_repeat Simple_repeat 2 31 0 203 329 73 0 chr2 38039292 38039374 -212648480 - MIR3 SINE MIR -26 182 95 573 103 0 0 chr2 38039563 38039641 -212648213 + AluJ/FLAM SINE Alu 2 79 -233 2646 97 10 79 chr2 38039649 38040052 -212647802 + MER51B LTR ERV1 2 376 -1 1540 127 5 0 chr2 38040052 38040272 -212647582 + AluSg/x SINE Alu 76 296 -16 1117 128 6 23 chr2 38040364 38040536 -212647318 + AluSx SINE Alu 3 171 -141 275 294 59 15 chr2 38040536 38040672 -212647182 + MIR SINE MIR 121 262 0 193 279 73 0 chr2 38040686 38040754 -212647100 + MIR SINE MIR 180 252 -10 2266 97 0 3 chr2 38040826 38041124 -212646730 + AluSg SINE Alu 1 297 -13 2138 113 0 13 chr2 38041126 38041435 -212646419 + AluSq SINE Alu 1 305 -8 2305 101 3 0 chr2 38041683 38041981 -212645873 - AluSq SINE Alu -14 299 1 1431 75 40 35 chr2 38042651 38042878 -212644976 + L1MA2 LINE L1 6077 6304 0 1784 147 21 4 chr2 38042896 38043175 -212644679 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 38043176 38043205 -212644649 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 38043210 38043234 -212644620 + AT_rich Low_complexity Low_complexity 1 24 0 2140 102 23 16 chr2 38043356 38043661 -212644193 + AluSx SINE Alu 1 307 -5 271 227 91 83 chr2 38043957 38043980 -212643874 - MIR SINE MIR -11 251 230 2103 120 3 3 chr2 38043980 38044279 -212643575 + AluSg SINE Alu 1 299 -11 271 227 91 83 chr2 38044279 38044387 -212643467 - MIR SINE MIR -32 230 119 215 245 0 0 chr2 38044685 38044738 -212643116 + A-rich Low_complexity Low_complexity 1 53 0 1000 191 62 36 chr2 38045023 38045314 -212642540 + L1ME1 LINE L1 5767 6163 -3 1919 132 0 28 chr2 38045403 38045691 -212642163 + AluSx SINE Alu 1 280 -32 1177 125 0 11 chr2 38045714 38045890 -212641964 + AluSg/x SINE Alu 127 300 -10 830 240 27 14 chr2 38046095 38046316 -212641538 + L1MEc LINE L1 203 426 -6137 717 285 4 23 chr2 38046308 38046571 -212641283 + L1MEc LINE L1 1290 1547 -4837 * 2076 212 100 42 chr2 38046552 38046603 -212641251 + L1MEc LINE L1 1781 1828 -4735 2406 89 0 0 chr2 38046603 38046905 -212640949 + AluSq SINE Alu 1 302 -11 2076 212 100 42 chr2 38046905 38047513 -212640341 + L1MEc LINE L1 1828 2478 -4085 305 246 0 0 chr2 38048128 38048185 -212639669 + MER58B DNA MER1_type 1 57 -284 * 784 199 68 0 chr2 38048178 38048324 -212639530 + MER58B DNA MER1_type 182 337 -4 1006 299 180 67 chr2 38048371 38049643 -212638211 + L2 LINE L2 983 2580 -692 424 123 0 0 chr2 38049643 38049700 -212638154 + U6 snRNA snRNA 1 57 -50 1006 299 180 67 chr2 38049700 38050236 -212637618 + L2 LINE L2 2580 3054 -218 1697 168 10 27 chr2 38050702 38051000 -212636854 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 38051161 38051190 -212636664 + AT_rich Low_complexity Low_complexity 1 29 0 475 287 15 40 chr2 38051415 38051575 -212636279 + MIR3 SINE MIR 2 160 -66 2452 60 0 3 chr2 38051627 38051927 -212635927 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 38051937 38051986 -212635868 + (TA)n Simple_repeat Simple_repeat 1 49 0 183 114 0 0 chr2 38053757 38053792 -212634062 + (A)n Simple_repeat Simple_repeat 1 35 0 2043 137 10 16 chr2 38053952 38054266 -212633588 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 38055160 38055186 -212632668 + AT_rich Low_complexity Low_complexity 1 26 0 228 268 18 0 chr2 38055841 38055897 -212631957 - L2 LINE L2 -9 3263 3207 242 289 14 113 chr2 38056039 38056181 -212631673 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 38056600 38056621 -212631233 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 38056930 38056961 -212630893 + AT_rich Low_complexity Low_complexity 1 31 0 2351 101 3 0 chr2 38057069 38057377 -212630477 + AluSp SINE Alu 1 309 -4 234 298 165 54 chr2 38057420 38057508 -212630346 + L2 LINE L2 1698 1775 -1539 2170 113 0 0 chr2 38057508 38057799 -212630055 + AluSc SINE Alu 2 292 -17 234 298 165 54 chr2 38057799 38058206 -212629648 + L2 LINE L2 1775 2248 -1066 217 330 156 52 chr2 38058293 38058581 -212629273 + L2 LINE L2 2432 2749 -565 895 231 176 33 chr2 38058583 38058942 -212628912 + L1MC4 LINE L1 7632 8041 -1 1584 220 0 0 chr2 38058949 38059254 -212628600 + AluJo SINE Alu 1 305 -7 2217 97 17 0 chr2 38059579 38059868 -212627986 + AluSc SINE Alu 1 294 -15 1895 133 27 7 chr2 38059880 38060173 -212627681 + AluSx SINE Alu 1 299 -13 216 0 0 0 chr2 38110289 38110313 -212577541 + (A)n Simple_repeat Simple_repeat 1 24 0 1036 230 16 24 chr2 38110435 38110747 -212577107 - LTR28 LTR ERV1 -141 495 342 500 249 23 50 chr2 38110752 38111035 -212576819 + LTR28 LTR ERV1 564 1459 -193 299 155 0 119 chr2 38111230 38111314 -212576540 - HsTC2 DNA Tc2 -1820 78 5 200 170 75 38 chr2 38111356 38111409 -212576445 - MIR SINE MIR -100 162 108 1859 145 3 23 chr2 38112207 38112517 -212575337 + AluSx SINE Alu 3 306 -6 876 69 0 0 chr2 38112599 38112715 -212575139 + (GAA)n Simple_repeat Simple_repeat 2 117 0 320 183 50 0 chr2 38113210 38113270 -212574584 - Alu SINE Alu -7 294 232 1039 100 0 7 chr2 38113271 38113411 -212574443 - AluSq/x SINE Alu -174 139 1 1965 133 0 10 chr2 38113862 38113874 -212573980 - AluSx SINE Alu -14 298 287 903 67 0 0 chr2 38113874 38113993 -212573861 + (TTCC)n Simple_repeat Simple_repeat 1 119 0 1965 133 0 10 chr2 38113993 38114281 -212573573 - AluSx SINE Alu -25 287 1 240 125 0 0 chr2 38114369 38114409 -212573445 + MLT1A1 LTR MaLR 4 43 -322 370 175 93 52 chr2 38114834 38114858 -212572996 - MER5A DNA MER1_type -80 109 87 2220 83 0 20 chr2 38114858 38115158 -212572696 - AluY SINE Alu -17 294 1 370 175 93 52 chr2 38115158 38115230 -212572624 - MER5A DNA MER1_type -102 87 9 231 320 144 7 chr2 38115271 38115424 -212572430 + MIR SINE MIR 37 210 -52 2050 94 31 3 chr2 38116621 38116908 -212570946 + AluSx SINE Alu 1 295 -17 1883 129 7 3 chr2 38116910 38117213 -212570641 + AluSx SINE Alu 1 304 -8 1219 120 112 56 chr2 38117915 38118148 -212569706 + AluJb SINE Alu 13 258 -54 1008 157 47 178 chr2 38119584 38119922 -212567932 + AluJo SINE Alu 1 294 -8 2406 112 0 0 chr2 38121394 38121736 -212566118 + AluSx SINE Alu 1 342 0 1525 204 147 7 chr2 38122599 38123071 -212564783 - L1MB7 LINE L1 -1 6183 5660 415 104 15 30 chr2 38123286 38123302 -212564552 - AluJo SINE Alu -163 149 134 2438 92 0 0 chr2 38123302 38123607 -212564247 - AluSc SINE Alu -4 305 1 415 104 15 30 chr2 38123607 38123657 -212564197 - AluJo SINE Alu -178 134 84 2656 87 95 7 chr2 38124255 38124667 -212563187 + LTR7 LTR ERV1 1 448 -2 554 153 20 0 chr2 38125054 38125152 -212562702 + MLT2B3 LTR ERVL 101 200 -354 412 59 0 15 chr2 38125188 38125256 -212562598 + L1PBa LINE L1 1 67 -6796 13656 171 40 9 chr2 38125280 38125385 -212562469 + L1PB1 LINE L1 2527 2627 -4240 1959 156 7 0 chr2 38125385 38125687 -212562167 - AluSx SINE Alu -8 304 1 13656 171 40 9 chr2 38125687 38129803 -212558051 + L1PB1 LINE L1 2627 6862 -5 1075 142 74 159 chr2 38131783 38132092 -212555762 + AluJo SINE Alu 16 298 -14 2050 143 0 7 chr2 38132438 38132745 -212555109 - AluSx SINE Alu -7 305 1 274 314 237 8 chr2 38134512 38134630 -212553224 + MIR3 SINE MIR 42 186 -22 299 207 82 59 chr2 38134859 38134994 -212552860 + L1MC5 LINE L1 7794 7931 -30 1787 161 7 16 chr2 38136147 38136452 -212551402 + AluJb SINE Alu 1 302 -10 3079 199 149 50 chr2 38136488 38136652 -212551202 - Charlie1 DNA MER1_type -1 2760 2614 2574 68 0 0 chr2 38136652 38136963 -212550891 + AluY SINE Alu 1 311 0 3079 199 149 50 chr2 38136963 38137017 -212550837 - Charlie1 DNA MER1_type -147 2614 2567 2567 64 0 0 chr2 38137017 38137328 -212550526 + AluY SINE Alu 1 311 0 3079 199 149 50 chr2 38137328 38137658 -212550196 - Charlie1 DNA MER1_type -194 2567 2271 1603 126 142 8 chr2 38137658 38137912 -212549942 + AluSx SINE Alu 6 293 -19 3079 199 149 50 chr2 38137912 38138689 -212549165 - Charlie1 DNA MER1_type -490 2271 1 2333 89 0 0 chr2 38139068 38139361 -212548493 + AluSc SINE Alu 1 293 -16 1840 154 0 20 chr2 38139740 38140033 -212547821 + AluJb SINE Alu 1 287 -25 1737 168 16 16 chr2 38140069 38140378 -212547476 + AluJo SINE Alu 1 309 -3 2256 96 0 0 chr2 38141033 38141313 -212546541 + AluSx SINE Alu 1 280 -32 195 42 0 0 chr2 38141313 38141337 -212546517 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 282 216 81 0 chr2 38141876 38141950 -212545904 - MIR SINE MIR -86 176 97 180 368 115 11 chr2 38142010 38142097 -212545757 - MIR SINE MIR -148 114 19 262 229 43 43 chr2 38143121 38143191 -212544663 + L2 LINE L2 3200 3269 -44 * 268 309 152 48 chr2 38143183 38143452 -212544402 - L3 LINE CR1 -288 1289 993 318 26 0 0 chr2 38144071 38144110 -212543744 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 229 368 0 0 chr2 38144258 38144345 -212543509 + MIR SINE MIR 25 111 -151 8298 55 1 0 chr2 38144349 38145314 -212542540 + LTR5 LTR ERVK 1 966 -3 181 204 111 19 chr2 38145389 38145443 -212542411 - MIR SINE MIR -8 254 196 242 214 0 0 chr2 38145493 38145535 -212542319 + MIR SINE MIR 60 101 -161 198 313 45 0 chr2 38145539 38145606 -212542248 - MIR SINE MIR -77 185 116 319 314 69 0 chr2 38145649 38145751 -212542103 - MIR SINE MIR -151 111 3 335 214 120 34 chr2 38146028 38146145 -212541709 + L2 LINE L2 3183 3309 -4 195 42 0 0 chr2 38148252 38148276 -212539578 + (CA)n Simple_repeat Simple_repeat 2 25 0 1200 248 52 75 chr2 38148396 38148755 -212539099 + L1MC4a LINE L1 5307 5646 -2162 1415 152 82 30 chr2 38148755 38149025 -212538829 - AluJb SINE Alu -28 284 1 1200 248 52 75 chr2 38149025 38149306 -212538548 + L1MC4a LINE L1 5646 5932 -1876 810 282 159 18 chr2 38149542 38150053 -212537801 + L2 LINE L2 2630 3224 -89 191 300 53 79 chr2 38151557 38151747 -212536107 - L2 LINE L2 -883 2431 2247 800 233 140 84 chr2 38152078 38152379 -212535475 - L2 LINE L2 -720 2594 2258 2352 75 20 0 chr2 38152379 38152672 -212535182 + AluSg SINE Alu 1 299 -11 800 233 140 84 chr2 38152672 38152821 -212535033 - L2 LINE L2 -1056 2258 2119 1428 215 97 34 chr2 38152826 38153118 -212534736 + Charlie4a DNA MER1_type 2 337 -1624 1859 177 0 7 chr2 38153118 38153423 -212534431 - AluSx SINE Alu -9 303 1 1428 215 97 34 chr2 38153423 38153605 -212534249 + Charlie4a DNA MER1_type 337 506 -2 695 178 0 0 chr2 38154307 38154436 -212533418 - L1ME3A LINE L1 -7 6163 6035 2196 94 0 14 chr2 38154671 38154989 -212532865 - AluY SINE Alu 0 314 1 351 235 20 59 chr2 38155416 38155526 -212532328 + GA-rich Low_complexity Low_complexity 6 110 -42 2361 69 0 16 chr2 38155526 38155830 -212532024 + AluY SINE Alu 1 299 -12 351 235 20 59 chr2 38155830 38155872 -212531982 + GA-rich Low_complexity Low_complexity 110 152 0 2316 102 3 0 chr2 38155997 38156301 -212531553 - AluSp SINE Alu -8 305 1 1165 250 43 85 chr2 38157092 38157189 -212530665 + L1ME3A LINE L1 5011 5110 -1060 1995 82 36 75 chr2 38157189 38157495 -212530359 + AluSg SINE Alu 1 294 -16 790 137 0 65 chr2 38157500 38157639 -212530215 + FLAM_C SINE Alu 1 130 -3 1165 250 43 85 chr2 38157639 38158138 -212529716 + L1ME3A LINE L1 5114 5557 -613 2096 154 0 0 chr2 38158138 38158450 -212529404 - AluSx SINE Alu 0 312 1 1165 250 43 85 chr2 38158450 38158830 -212529024 + L1ME3A LINE L1 5557 5951 -219 1541 176 103 0 chr2 38159180 38159452 -212528402 + AluJb SINE Alu 1 300 -12 27 0 0 0 chr2 38159526 38159553 -212528301 + AT_rich Low_complexity Low_complexity 1 27 0 180 336 88 26 chr2 38161235 38161348 -212526506 + MIR SINE MIR 12 131 -131 832 156 0 0 chr2 38162029 38162157 -212525697 - FLAM_A SINE Alu -5 128 1 2122 133 0 3 chr2 38162200 38162501 -212525353 + AluSx SINE Alu 1 300 -12 304 212 263 0 chr2 38163364 38163463 -212524391 - MIR SINE MIR 0 262 138 243 243 340 28 chr2 38164114 38164258 -212523596 - MIR SINE MIR -40 222 34 245 136 68 51 chr2 38164655 38164714 -212523140 - L2 LINE L2 0 3313 3254 398 272 72 33 chr2 38165774 38165904 -212521950 - MER5A DNA MER1_type -2 187 47 2058 129 31 47 chr2 38165904 38166290 -212521564 - L1PA16 LINE L1 0 6166 5787 398 272 72 33 chr2 38166290 38166339 -212521515 - MER5A DNA MER1_type -142 47 1 204 302 32 0 chr2 38167004 38167067 -212520787 - MER5A DNA MER1_type -116 73 9 2220 106 3 0 chr2 38167664 38167956 -212519898 + AluSp SINE Alu 1 293 -20 1416 98 0 0 chr2 38168400 38168584 -212519270 + AluSq SINE Alu 75 258 -55 405 0 0 0 chr2 38168590 38168635 -212519219 + (CA)n Simple_repeat Simple_repeat 2 46 0 315 0 0 0 chr2 38168675 38168710 -212519144 + (CA)n Simple_repeat Simple_repeat 2 36 0 1007 106 82 12 chr2 38169006 38169176 -212518678 - MER30 DNA MER1_type -48 182 1 24 53 0 0 chr2 38170226 38170264 -212517590 + AT_rich Low_complexity Low_complexity 1 38 0 523 255 120 30 chr2 38170331 38170531 -212517323 + MIR SINE MIR 1 218 -44 239 296 53 61 chr2 38170730 38170862 -212516992 - MIR SINE MIR -69 193 63 24 0 0 0 chr2 38171007 38171031 -212516823 + AT_rich Low_complexity Low_complexity 1 24 0 195 69 0 0 chr2 38171866 38171895 -212515959 + (TA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr2 38172943 38172971 -212514883 + AT_rich Low_complexity Low_complexity 1 28 0 642 216 312 0 chr2 38173531 38173730 -212514124 + MIR SINE MIR 2 262 0 1790 169 13 25 chr2 38174755 38175069 -212512785 + AluJb SINE Alu 1 310 -2 187 196 22 0 chr2 38175251 38175297 -212512557 - L2 LINE L2 -417 2855 2809 279 0 0 0 chr2 38175660 38175691 -212512163 + (T)n Simple_repeat Simple_repeat 1 31 0 290 182 216 23 chr2 38176310 38176398 -212511456 + L2 LINE L2 3163 3267 -5 2468 74 0 6 chr2 38176415 38176726 -212511128 + AluY SINE Alu 1 309 -2 270 297 31 23 chr2 38178013 38178141 -212509713 - MER112 DNA MER1_type -13 247 119 2079 132 3 3 chr2 38178914 38179209 -212508645 + AluSx SINE Alu 1 295 -17 2158 126 0 0 chr2 38180236 38180530 -212507324 + AluSx SINE Alu 1 294 -18 2423 71 3 0 chr2 38180530 38180825 -212507029 + AluSp SINE Alu 1 296 -17 1533 143 96 35 chr2 38180827 38181170 -212506684 + MER47A DNA MER2_type 1 364 -2 724 275 180 48 chr2 38181804 38182447 -212505407 - L1M4 LINE L1 -2688 3458 2731 1217 299 30 30 chr2 38183327 38183765 -212504089 - L2 LINE L2 0 3313 2876 213 197 0 82 chr2 38183935 38183996 -212503858 + L3 LINE CR1 1519 1574 -3 246 32 0 0 chr2 38184520 38184551 -212503303 + (CA)n Simple_repeat Simple_repeat 2 32 0 205 301 72 12 chr2 38184581 38184664 -212503190 + MIR SINE MIR 20 107 -155 1172 123 0 0 chr2 38185359 38185521 -212502333 - AluSp SINE Alu -15 298 137 2058 134 0 3 chr2 38185521 38185819 -212502035 - AluSq SINE Alu -16 297 1 231 306 59 24 chr2 38187088 38187173 -212500681 - L2 LINE L2 0 3313 3226 333 331 69 70 chr2 38187444 38188067 -212499787 - L2 LINE L2 -10 3262 2587 354 295 80 46 chr2 38188076 38188251 -212499603 - MIR SINE MIR -46 216 38 2225 105 3 0 chr2 38188977 38189273 -212498581 + AluSp SINE Alu 1 297 -16 1343 217 76 3 chr2 38190274 38190534 -212497320 + MER58B DNA MER1_type 1 289 -2131 1866 146 56 9 chr2 38190534 38190856 -212496998 + MER1B DNA MER1_type 1 337 0 1343 217 76 3 chr2 38190856 38190909 -212496945 + MER58B DNA MER1_type 289 337 -4 207 319 51 97 chr2 38190936 38191193 -212496661 + L2 LINE L2 2869 3113 -159 21 0 0 0 chr2 38191224 38191245 -212496609 + AT_rich Low_complexity Low_complexity 1 21 0 270 132 75 0 chr2 38191611 38191664 -212496190 + L1MC/D LINE L1 5747 5803 -2005 1476 151 36 4 chr2 38191759 38192011 -212495843 + AluJo SINE Alu 23 282 -30 338 279 299 0 chr2 38193092 38193246 -212494608 - MIR SINE MIR -34 228 29 188 196 0 20 chr2 38195132 38195183 -212492671 + (CATA)n Simple_repeat Simple_repeat 1 50 0 1110 281 47 7 chr2 38195200 38195652 -212492202 - L1MC/D LINE L1 -757 5389 5192 302 264 66 11 chr2 38195790 38195881 -212491973 - L1MC4 LINE L1 -1333 6709 6614 259 255 21 32 chr2 38195881 38195975 -212491879 - L1MC/D LINE L1 -1191 4955 4863 949 220 116 22 chr2 38196198 38196430 -212491424 - MIR SINE MIR -7 255 2 2362 82 3 0 chr2 38197690 38197993 -212489861 + AluSc SINE Alu 3 306 -3 2269 91 27 0 chr2 38199080 38199376 -212488478 - AluSq SINE Alu -9 304 1 2185 190 46 8 chr2 38199503 38200201 -212487653 + L1M4 LINE L1 4834 5561 -617 241 61 0 0 chr2 38200197 38200230 -212487624 - L1M LINE L1 -701 5420 5388 * 1510 167 145 19 chr2 38200423 38200747 -212487107 + MLT1A1 LTR MaLR 1 365 0 903 222 91 17 chr2 38201030 38201260 -212486594 + MIR SINE MIR 8 254 -8 210 119 0 153 chr2 38201781 38201840 -212486014 + MIR SINE MIR 97 146 -62 590 150 88 18 chr2 38202221 38202334 -212485520 + MER5A DNA MER1_type 1 121 -68 480 129 0 13 chr2 38202736 38202953 -212484901 + AluSx SINE Alu 1 301 -9 22 0 0 0 chr2 38203288 38203310 -212484544 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 38203808 38203829 -212484025 + AT_rich Low_complexity Low_complexity 1 21 0 1230 20 14 0 chr2 38203829 38203976 -212483878 - L1PA4 LINE L1 -4 6151 6003 267 385 21 0 chr2 38204729 38204825 -212483029 + MIR SINE MIR 13 110 -152 274 200 0 35 chr2 38204846 38204931 -212482923 + (CTA)n Simple_repeat Simple_repeat 1 82 0 207 312 64 0 chr2 38205637 38205746 -212482108 - MIR SINE MIR -13 249 134 2533 70 3 0 chr2 38205980 38206323 -212481531 + AluSp SINE Alu 1 344 0 189 171 0 0 chr2 38206386 38206421 -212481433 + T-rich Low_complexity Low_complexity 2 36 0 317 250 75 0 chr2 38206678 38206758 -212481096 + L2 LINE L2 3227 3312 -1 337 284 11 11 chr2 38207702 38207797 -212480057 + MIR SINE MIR 44 138 -70 2222 98 0 13 chr2 38207813 38208119 -212479735 + AluSg SINE Alu 9 310 0 22 56 0 0 chr2 38208564 38208600 -212479254 + AT_rich Low_complexity Low_complexity 1 36 0 744 171 196 0 chr2 38208750 38208908 -212478946 + MER5A DNA MER1_type 1 189 0 1171 177 25 0 chr2 38208957 38209160 -212478694 + MER58B DNA MER1_type 131 338 -3 2244 81 3 17 chr2 38209267 38209565 -212478289 - AluSq SINE Alu -19 294 1 255 336 86 23 chr2 38209688 38209816 -212478038 - MIR3 SINE MIR -66 142 7 2385 63 7 10 chr2 38211374 38211677 -212476177 - AluY SINE Alu -9 302 1 1585 164 27 37 chr2 38211677 38211976 -212475878 - AluJb SINE Alu -14 298 3 1701 159 14 14 chr2 38213138 38213427 -212474427 - AluJo SINE Alu -23 289 1 27 29 0 0 chr2 38213436 38213470 -212474384 + AT_rich Low_complexity Low_complexity 1 34 0 34 65 0 0 chr2 38213674 38213736 -212474118 + AT_rich Low_complexity Low_complexity 1 62 0 1981 149 0 13 chr2 38213824 38214125 -212473729 + AluSx SINE Alu 1 297 -15 273 326 42 0 chr2 38214194 38214289 -212473565 - L2 LINE L2 -51 3221 3123 22 0 0 0 chr2 38214311 38214333 -212473521 + AT_rich Low_complexity Low_complexity 1 22 0 488 289 23 35 chr2 38214579 38214763 -212473091 + MIR SINE MIR 42 221 -41 2339 78 0 10 chr2 38215647 38215955 -212471899 + AluY SINE Alu 1 305 -6 219 311 74 33 chr2 38216185 38216307 -212471547 - MER5A DNA MER1_type 0 189 63 3688 172 40 18 chr2 38216354 38217150 -212470704 - L1MC3 LINE L1 -2 7783 6970 27 0 0 0 chr2 38217158 38217185 -212470669 + AT_rich Low_complexity Low_complexity 1 27 0 448 116 63 32 chr2 38217337 38217432 -212470422 - L1MC3 LINE L1 -1866 5942 5845 323 266 174 0 chr2 38217490 38217599 -212470255 + MIR SINE MIR 77 204 -58 3714 166 4 9 chr2 38217612 38218300 -212469554 - L1 LINE L1 -1650 4496 3812 431 254 0 0 chr2 38218297 38218419 -212469435 + L1MA4 LINE L1 5039 5160 -986 * 758 179 8 0 chr2 38218419 38218542 -212469312 + AluSq/x SINE Alu 1 124 -189 441 0 0 0 chr2 38218543 38218592 -212469262 + (CA)n Simple_repeat Simple_repeat 2 50 0 5642 139 23 9 chr2 38218592 38219712 -212468142 + L1MA4 LINE L1 5161 6300 0 787 273 84 20 chr2 38219756 38220148 -212467706 - L1MC/D LINE L1 -2075 5733 5317 798 196 33 0 chr2 38220476 38220629 -212467225 - AluJo SINE Alu -8 294 137 701 190 190 0 chr2 38220880 38221064 -212466790 + MER20 DNA MER1_type 1 219 0 656 167 15 45 chr2 38221757 38221854 -212466000 - AluJo SINE Alu -184 128 34 2324 208 208 54 chr2 38221854 38222738 -212465116 + LTR28 LTR ERV1 1 1020 0 656 167 15 45 chr2 38222738 38222772 -212465082 - AluJo SINE Alu -278 34 1 324 289 37 7 chr2 38222855 38222990 -212464864 - L1ME3 LINE L1 -8 6154 6016 222 277 145 12 chr2 38223148 38223231 -212464623 + L2 LINE L2 3200 3293 -20 2214 122 10 3 chr2 38223490 38223801 -212464053 + AluSq SINE Alu 1 313 0 352 240 190 10 chr2 38224867 38225062 -212462792 - MIR SINE MIR -18 244 25 1962 143 3 3 chr2 38225558 38225858 -212461996 + AluJb SINE Alu 1 300 -12 883 173 120 0 chr2 38226036 38226227 -212461627 - MER20 DNA MER1_type 0 219 6 1926 106 3 93 chr2 38227464 38227786 -212460068 - AluSq SINE Alu -20 293 1 33 25 0 0 chr2 38228180 38228220 -212459634 + AT_rich Low_complexity Low_complexity 1 40 0 2349 86 0 10 chr2 38228596 38228899 -212458955 + AluSc SINE Alu 1 300 -9 489 308 201 5 chr2 38229333 38229547 -212458307 - MIR SINE MIR -5 257 2 209 248 9 138 chr2 38229569 38229678 -212458176 - L2 LINE L2 0 3272 3178 294 281 94 16 chr2 38230390 38230518 -212457336 + L2 LINE L2 3171 3308 -5 24 53 0 0 chr2 38230665 38230703 -212457151 + AT_rich Low_complexity Low_complexity 1 38 0 307 270 196 0 chr2 38230823 38230971 -212456883 - MER5B DNA MER1_type -1 177 1 2169 173 23 50 chr2 38231514 38231999 -212455855 - MER82 DNA MER2_type -181 472 1 532 230 110 64 chr2 38232019 38232134 -212455720 + L1MEc LINE L1 1941 2049 -4166 1017 225 28 0 chr2 38232134 38232352 -212455502 - MER58A DNA MER1_type 0 224 1 532 230 110 64 chr2 38232352 38232697 -212455157 + L1MEc LINE L1 2049 2381 -3834 418 197 0 0 chr2 38232744 38232820 -212455034 + Tigger5 DNA MER2_type 2 77 -2246 359 176 95 0 chr2 38232879 38232953 -212454901 + Tigger5 DNA MER2_type 2243 2323 0 823 218 32 11 chr2 38232980 38233260 -212454594 + L1MEc LINE L1 2468 2753 -3462 372 170 32 0 chr2 38233570 38233664 -212454190 + L1MA8 LINE L1 6191 6287 -4 27 73 0 0 chr2 38233771 38233826 -212454028 + AT_rich Low_complexity Low_complexity 1 55 0 1980 121 0 26 chr2 38234751 38235056 -212452798 - AluSx SINE Alu -15 297 1 550 178 0 0 chr2 38236829 38236919 -212450935 - 5S rRNA rRNA -31 90 1 381 368 8 8 chr2 38237414 38237539 -212450315 - MIR SINE MIR -67 141 17 229 383 11 11 chr2 38237743 38237837 -212450017 + L3 LINE CR1 35 128 -1449 181 265 15 29 chr2 38237941 38238009 -212449845 + L3 LINE CR1 262 328 -1249 583 239 175 1 chr2 38238061 38238250 -212449604 - MIR SINE MIR 0 262 39 363 331 277 29 chr2 38238344 38238939 -212448915 + L3 LINE CR1 577 1319 -258 231 325 67 42 chr2 38238942 38239062 -212448792 + MIR SINE MIR 137 259 -3 474 291 126 30 chr2 38239083 38239313 -212448541 - MIR SINE MIR -6 256 5 215 250 0 0 chr2 38239322 38239362 -212448492 + L3 LINE CR1 1400 1439 -138 2358 104 0 0 chr2 38239455 38239763 -212448091 - AluSx SINE Alu -4 308 1 229 263 13 66 chr2 38240382 38240458 -212447396 - MIR3 SINE MIR -47 161 90 554 326 63 78 chr2 38240577 38240908 -212446946 - L2 LINE L2 -5 3267 2942 48 32 0 0 chr2 38243852 38243914 -212443940 + GC_rich Low_complexity Low_complexity 1 62 0 1749 161 20 16 chr2 38244798 38245102 -212442752 - AluJo SINE Alu -7 305 1 431 127 0 0 chr2 38246222 38246285 -212441569 - AluS SINE Alu -247 63 1 245 293 147 0 chr2 38246619 38246694 -212441160 + L2 LINE L2 2555 2640 -674 230 0 0 32 chr2 38246894 38246925 -212440929 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 886 125 0 0 chr2 38246925 38247045 -212440809 - AluSq/x SINE Alu -192 120 1 204 333 96 30 chr2 38247411 38247546 -212440308 + L2 LINE L2 2387 2530 -784 1731 122 43 79 chr2 38247732 38248036 -212439818 + AluSx SINE Alu 1 293 -19 2409 77 0 3 chr2 38248285 38248597 -212439257 + AluSq SINE Alu 1 311 -2 1117 151 6 0 chr2 38248598 38248777 -212439077 + AluSg/x SINE Alu 133 312 0 1916 117 0 50 chr2 38248885 38249223 -212438631 + AluSx SINE Alu 1 323 0 336 309 139 0 chr2 38249305 38249454 -212438400 + MIR SINE MIR 16 181 -59 231 36 0 0 chr2 38249454 38249482 -212438372 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 696 284 28 19 chr2 38249509 38249724 -212438130 + MIR SINE MIR 44 260 -2 212 246 35 0 chr2 38250284 38250341 -212437513 - L2 LINE L2 0 3272 3214 38 0 0 0 chr2 38250766 38250804 -212437050 + AT_rich Low_complexity Low_complexity 1 38 0 752 125 0 0 chr2 38250804 38250908 -212436946 - U6 snRNA snRNA -3 104 1 635 140 59 15 chr2 38250908 38251044 -212436810 - L1MB7 LINE L1 -42 6142 6001 251 241 62 62 chr2 38251094 38251206 -212436648 - LTR16C LTR ERVL -379 112 1 465 370 65 12 chr2 38251263 38251585 -212436269 + L2 LINE L2 2309 2647 -667 205 340 42 35 chr2 38252088 38252232 -212435622 - L2 LINE L2 -1374 1940 1796 4218 149 29 9 chr2 38252351 38253124 -212434730 + L1MB3 LINE L1 5395 6182 -1 2415 81 7 0 chr2 38253795 38254092 -212433762 + AluSp SINE Alu 1 299 -14 2146 131 0 3 chr2 38254137 38254434 -212433420 - AluSx SINE Alu -16 296 1 273 284 40 14 chr2 38255999 38256073 -212431781 + MIR SINE MIR 82 157 -105 1786 149 0 84 chr2 38256251 38256573 -212431281 + AluSx SINE Alu 1 295 -17 3425 114 20 2 chr2 38256835 38257333 -212430521 - MER84 LTR ERV1 0 507 1 904 215 0 23 chr2 38258091 38258263 -212429591 + MER5B DNA MER1_type 1 168 -10 4156 200 50 15 chr2 38258320 38259285 -212428569 - Charlie1a DNA MER1_type -1307 1454 444 1861 167 7 3 chr2 38259285 38259590 -212428264 - AluSx SINE Alu -2 310 5 4156 200 50 15 chr2 38259590 38259713 -212428141 - Charlie1a DNA MER1_type -2317 444 327 1787 133 111 11 chr2 38259785 38259809 -212428045 + L1PB4 LINE L1 5753 5773 -383 438 20 0 0 chr2 38259809 38259860 -212427994 + (CA)n Simple_repeat Simple_repeat 1 51 0 1787 133 111 11 chr2 38259860 38260196 -212427658 + L1PB4 LINE L1 5773 6149 -7 457 286 57 10 chr2 38260191 38260383 -212427471 + L1MEc LINE L1 111 311 -6085 * 857 154 10 170 chr2 38260470 38260581 -212427273 - Charlie1a DNA MER1_type -2464 297 170 2169 134 3 0 chr2 38260581 38260886 -212426968 + AluSq SINE Alu 1 306 -7 857 154 10 170 chr2 38260886 38261129 -212426725 - Charlie1a DNA MER1_type -2591 170 1 823 237 28 28 chr2 38261863 38262116 -212425738 + LTR16A LTR ERVL 196 448 -2 206 211 0 0 chr2 38263243 38263288 -212424566 + MIR SINE MIR 115 160 -48 304 315 87 93 chr2 38263561 38264280 -212423574 - L1M2 LINE L1 -5720 1129 353 2470 56 0 3 chr2 38264585 38264890 -212422964 + AluY SINE Alu 1 304 -7 310 42 42 0 chr2 38266176 38266224 -212421630 + (TA)n Simple_repeat Simple_repeat 1 50 0 320 141 56 14 chr2 38266225 38266296 -212421558 - L1MCa LINE L1 -4358 2068 1995 292 188 43 14 chr2 38266300 38266369 -212421485 - MIR SINE MIR -70 192 122 565 198 14 14 chr2 38266929 38267084 -212420770 - L1ME4a LINE L1 -6 6115 5961 234 0 0 0 chr2 38267095 38267121 -212420733 + (TG)n Simple_repeat Simple_repeat 2 27 0 205 311 33 16 chr2 38267299 38267360 -212420494 - MIR SINE MIR -177 85 24 364 279 19 62 chr2 38268949 38269110 -212418744 - L2 LINE L2 -1 3312 3159 * 372 310 71 10 chr2 38269108 38269305 -212418549 - L2 LINE L2 -237 3035 2827 433 338 29 20 chr2 38269610 38269814 -212418040 + MIR3 SINE MIR 3 208 0 548 260 123 53 chr2 38269834 38270061 -212417793 - MIR SINE MIR 0 262 20 21 0 0 0 chr2 38270501 38270522 -212417332 + AT_rich Low_complexity Low_complexity 1 21 0 2407 101 0 0 chr2 38270631 38270937 -212416917 + AluSp SINE Alu 1 306 -7 861 129 8 8 chr2 38270943 38271075 -212416779 + AluSg/x SINE Alu 163 294 -16 735 104 37 0 chr2 38271088 38271223 -212416631 - Charlie5 DNA MER1_type -59 2553 2414 1694 141 22 51 chr2 38271350 38271663 -212416191 - AluJo SINE Alu -8 304 1 593 208 104 47 chr2 38272426 38272638 -212415216 + MER112 DNA MER1_type 1 224 -36 2192 65 0 7 chr2 38272918 38273195 -212414659 - AluSc SINE Alu -34 275 1 441 318 57 11 chr2 38273385 38273589 -212414265 - MIR SINE MIR 0 262 50 22 0 0 0 chr2 38274791 38274813 -212413041 + AT_rich Low_complexity Low_complexity 1 22 0 340 250 8 31 chr2 38275267 38275395 -212412459 + CT-rich Low_complexity Low_complexity 1 125 0 2283 104 0 3 chr2 38275757 38276054 -212411800 + AluSc SINE Alu 1 296 -13 183 314 0 0 chr2 38276512 38276563 -212411291 - L2 LINE L2 -17 3255 3205 1577 168 0 87 chr2 38277164 38277511 -212410343 + AluJb SINE Alu 3 312 0 268 310 10 0 chr2 38278142 38278242 -212409612 + L1MC4a LINE L1 5829 5929 -1879 463 228 64 142 chr2 38280408 38280844 -212407010 + MLT1H LTR MaLR 50 567 0 1420 325 72 29 chr2 38281684 38282372 -212405482 + HAL1 LINE L1 155 896 -1611 2012 120 0 66 chr2 38282372 38282706 -212405148 + AluJo SINE Alu 1 312 0 1420 325 72 29 chr2 38282706 38282959 -212404895 + HAL1 LINE L1 896 1137 -1370 1429 265 46 24 chr2 38283030 38283487 -212404367 + HAL1 LINE L1 1464 1930 -577 3615 215 164 85 chr2 38283586 38283946 -212403908 - L2 LINE L2 -751 2563 2233 221 29 0 57 chr2 38283946 38283981 -212403873 + (TATAA)n Simple_repeat Simple_repeat 1 33 0 3615 215 164 85 chr2 38283981 38283992 -212403862 - L2 LINE L2 -1081 2233 2224 278 120 0 60 chr2 38283992 38284033 -212403821 + FLAM SINE Alu 81 120 -182 198 0 0 0 chr2 38284033 38284055 -212403799 + (TTA)n Simple_repeat Simple_repeat 2 23 0 3615 215 164 85 chr2 38284063 38284094 -212403760 - L2 LINE L2 -1090 2224 2197 275 51 51 17 chr2 38284094 38284153 -212403701 + (CA)n Simple_repeat Simple_repeat 2 62 0 3615 215 164 85 chr2 38284153 38285289 -212402565 - L2 LINE L2 -1117 2197 849 948 227 252 0 chr2 38285615 38285932 -212401922 - LTR16A LTR ERVL 0 450 54 1944 149 17 0 chr2 38286626 38286922 -212400932 + AluJo SINE Alu 6 306 -6 294 321 0 12 chr2 38288144 38288228 -212399626 - MIR3 SINE MIR -15 193 111 22 56 0 19 chr2 38288874 38288901 -212398953 + AT_rich Low_complexity Low_complexity 1 27 -26 1426 148 30 112 chr2 38288901 38289232 -212398622 + AluYb8 SINE Alu 1 304 -14 22 56 0 19 chr2 38289232 38289258 -212398596 + AT_rich Low_complexity Low_complexity 27 53 0 183 129 0 0 chr2 38289728 38289759 -212398095 + (CAGGC)n Simple_repeat Simple_repeat 2 32 0 240 35 0 0 chr2 38289843 38289872 -212397982 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 644 58 23 0 chr2 38290404 38290490 -212397364 + AluSg/x SINE Alu 219 306 -3 1187 144 44 0 chr2 38290728 38290909 -212396945 - MER5A DNA MER1_type 0 189 1 270 56 0 0 chr2 38291508 38291544 -212396310 + (TG)n Simple_repeat Simple_repeat 1 36 0 1704 163 3 48 chr2 38292557 38292870 -212394984 - AluJb SINE Alu -13 299 1 270 191 36 12 chr2 38293455 38293539 -212394315 + (TA)n Simple_repeat Simple_repeat 1 86 0 690 296 76 9 chr2 38293669 38293892 -212393962 - MIR SINE MIR -2 260 23 207 0 0 0 chr2 38296138 38296161 -212391693 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 330 26 0 0 chr2 38296997 38297036 -212390818 + (TG)n Simple_repeat Simple_repeat 1 39 0 284 240 190 0 chr2 38297071 38297171 -212390683 + MER20B DNA MER1_type 67 185 -598 808 299 51 16 chr2 38297252 38297720 -212390134 - MLT1K LTR MaLR 0 588 67 2282 120 0 3 chr2 38297826 38298135 -212389719 - AluSx SINE Alu -4 308 1 1912 170 3 0 chr2 38298299 38298599 -212389255 + AluJo SINE Alu 1 301 -11 738 167 68 0 chr2 38299310 38299442 -212388412 + MER30 DNA MER1_type 1 141 -89 986 157 0 41 chr2 38299459 38299631 -212388223 - AluSx SINE Alu -23 289 125 279 0 0 0 chr2 38299640 38299671 -212388183 + (TG)n Simple_repeat Simple_repeat 2 32 0 312 339 24 0 chr2 38299777 38299901 -212387953 + L1ME LINE L1 43 169 -5901 2905 64 111 7 chr2 38300049 38300455 -212387399 - LTR7 LTR ERV1 -2 448 1 2243 103 73 14 chr2 38300455 38300823 -212387031 - HERVH LTR ERV1 0 7713 7324 1193 124 89 0 chr2 38300823 38301025 -212386829 - HERVH LTR ERV1 -1894 5819 5600 3723 125 6 0 chr2 38301026 38301555 -212386299 - HERVH LTR ERV1 -2564 5149 4618 * 5847 90 4 2 chr2 38301553 38302365 -212385489 - HERVH LTR ERV1 -3761 3952 3140 * 14775 91 21 20 chr2 38302362 38304551 -212383303 - HERVH LTR ERV1 -4729 2984 793 380 77 31 31 chr2 38304571 38304636 -212383218 - LTR7 LTR ERV1 -40 410 346 1004 134 0 0 chr2 38304637 38304771 -212383083 - AluSx SINE Alu -178 134 1 674 134 0 0 chr2 38304771 38304868 -212382986 + MER30 DNA MER1_type 134 230 0 1677 278 175 22 chr2 38305279 38305850 -212382004 + L2 LINE L2 2013 2495 -818 2126 123 7 0 chr2 38305850 38306143 -212381711 + AluSx SINE Alu 1 295 -17 1677 278 175 22 chr2 38306143 38306519 -212381335 + L2 LINE L2 2495 3111 -202 574 237 26 46 chr2 38307070 38307222 -212380632 + L2 LINE L2 3160 3308 -5 680 307 68 51 chr2 38307388 38307629 -212380225 + L2 LINE L2 2596 2831 -482 2258 104 0 19 chr2 38307629 38307938 -212379916 - AluSx SINE Alu -9 303 1 680 307 68 51 chr2 38307938 38308394 -212379460 + L2 LINE L2 2831 3313 0 247 229 33 0 chr2 38308428 38308489 -212379365 + L2 LINE L2 3008 3070 -243 278 339 55 16 chr2 38308690 38308817 -212379037 - MIR SINE MIR -128 134 3 3020 275 67 27 chr2 38310561 38310925 -212376929 + L2 LINE L2 2041 2389 -924 2061 137 0 0 chr2 38310925 38311218 -212376636 - AluSx SINE Alu -19 293 1 3020 275 67 27 chr2 38311218 38311929 -212375925 + L2 LINE L2 2389 3161 -152 1703 152 61 0 chr2 38311929 38312046 -212375808 + AluJo SINE Alu 3 111 -201 249 0 73 0 chr2 38312046 38312087 -212375767 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 1703 152 61 0 chr2 38312087 38312233 -212375621 + AluJo SINE Alu 111 282 -30 3020 275 67 27 chr2 38312233 38312316 -212375538 + L2 LINE L2 3161 3239 -74 238 246 66 0 chr2 38313159 38313220 -212374634 - MER94 DNA DNA -61 73 9 293 307 10 10 chr2 38313598 38313699 -212374155 + MIR3 SINE MIR 96 196 -12 544 281 109 17 chr2 38313702 38313940 -212373914 + MIR SINE MIR 2 261 -1 334 308 0 19 chr2 38314015 38314122 -212373732 - MIR SINE MIR -98 164 60 709 265 26 19 chr2 38314740 38315008 -212372846 - L1ME4a LINE L1 -206 5915 5646 432 0 0 0 chr2 38315401 38315449 -212372405 + (CA)n Simple_repeat Simple_repeat 2 49 0 260 335 133 25 chr2 38315507 38315665 -212372189 - MIR SINE MIR -82 180 6 305 297 8 78 chr2 38315667 38315687 -212372167 + MER5A DNA MER1_type 56 76 -113 2048 128 7 10 chr2 38315687 38315992 -212371862 + AluJb SINE Alu 1 304 -8 305 297 8 78 chr2 38315992 38316099 -212371755 + MER5A DNA MER1_type 76 174 -15 639 286 41 25 chr2 38316380 38316625 -212371229 + MIR SINE MIR 2 250 -12 5340 199 31 45 chr2 38316713 38316975 -212370879 - L1MB8 LINE L1 -6 6172 5908 2636 48 3 0 chr2 38316975 38317285 -212370569 + AluY SINE Alu 1 311 0 5340 199 31 45 chr2 38317285 38317559 -212370295 - L1MB8 LINE L1 -270 5908 5632 2550 71 0 0 chr2 38317559 38317868 -212369986 - AluSc SINE Alu 0 309 1 5340 199 31 45 chr2 38317868 38319656 -212368198 - L1MB8 LINE L1 -546 5632 3876 1422 190 111 2 chr2 38319668 38320073 -212367781 - Charlie2a DNA MER1_type -919 1943 1495 1524 219 74 31 chr2 38321232 38321511 -212366343 + LTR37B LTR ERV1 1 308 -160 1983 118 0 7 chr2 38321511 38321790 -212366064 - AluSx SINE Alu -3 309 33 1524 219 74 31 chr2 38321790 38321957 -212365897 + LTR37B LTR ERV1 308 466 -2 379 289 133 14 chr2 38321959 38322253 -212365601 - L1MB8 LINE L1 -3343 2803 2475 355 332 17 0 chr2 38322249 38322487 -212365367 - L1MEd LINE L1 -3891 2649 2444 * 304 236 60 95 chr2 38322836 38323241 -212364613 - L1MEd LINE L1 -4751 1791 1582 1847 162 13 7 chr2 38323247 38323550 -212364304 - AluSx SINE Alu -5 307 3 499 281 163 7 chr2 38323597 38323750 -212364104 + MER5A DNA MER1_type 13 189 0 933 311 67 55 chr2 38323751 38324085 -212363769 - L1MEd LINE L1 -5003 1527 1198 1780 164 39 7 chr2 38324085 38324366 -212363488 - AluJb SINE Alu -22 290 1 933 311 67 55 chr2 38324366 38325131 -212362723 - L1MEd LINE L1 -5332 1198 415 271 273 91 10 chr2 38325603 38325702 -212362152 + MIR SINE MIR 3 109 -153 2377 80 0 0 chr2 38326023 38326324 -212361530 - AluSc SINE Alu -8 301 1 665 24 0 0 chr2 38326550 38326632 -212361222 - L1PA4 LINE L1 -3 6152 6071 246 230 40 0 chr2 38326978 38327052 -212360802 + Charlie7 DNA MER1_type 2536 2612 0 3611 147 57 9 chr2 38327091 38327725 -212360129 + L1PB3 LINE L1 5489 6152 -2 1655 197 83 12 chr2 38328378 38328810 -212359044 - MLT1C LTR MaLR 0 467 5 23 0 0 0 chr2 38329336 38329359 -212358495 + AT_rich Low_complexity Low_complexity 1 23 0 2129 123 10 0 chr2 38329975 38330277 -212357577 + AluSq SINE Alu 1 305 -8 680 173 15 0 chr2 38331828 38331961 -212355893 + L1PA16 LINE L1 6016 6150 -16 225 0 0 0 chr2 38331968 38331993 -212355861 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 423 285 41 0 chr2 38332249 38332421 -212355433 - L1ME4a LINE L1 -193 5928 5750 407 317 83 19 chr2 38332637 38332842 -212355012 - MIR SINE MIR -10 252 35 1997 157 13 0 chr2 38333141 38333440 -212354414 + AluSx SINE Alu 1 303 -9 621 282 16 55 chr2 38333956 38334211 -212353643 - MIR SINE MIR -3 259 15 186 222 44 78 chr2 38334232 38334322 -212353532 - MIR SINE MIR -110 152 66 2263 155 3 0 chr2 38335293 38335629 -212352225 + MER1B DNA MER1_type 1 337 0 201 196 0 0 chr2 38335683 38335729 -212352125 + T-rich Low_complexity Low_complexity 1 46 0 310 87 0 0 chr2 38335846 38335892 -212351962 - MADE1 DNA Mariner -34 46 1 1619 195 24 0 chr2 38337680 38337800 -212350054 + AluJo SINE Alu 1 117 -195 322 38 19 19 chr2 38337800 38337853 -212350001 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1619 195 24 0 chr2 38337853 38338019 -212349835 + AluJo SINE Alu 117 294 -18 1062 185 18 5 chr2 38338220 38338442 -212349412 + L1MC2 LINE L1 6112 6336 -8 709 231 18 123 chr2 38338797 38338923 -212348931 - MIR SINE MIR -2 260 177 7574 29 0 0 chr2 38338923 38340199 -212347655 - L1PA4 LINE L1 0 6155 4882 709 231 18 123 chr2 38340199 38340349 -212347505 - MIR SINE MIR -85 177 13 257 333 49 0 chr2 38340758 38340839 -212347015 - L2 LINE L2 -19 3253 3169 1513 138 98 64 chr2 38340984 38341310 -212346544 + MER1B DNA MER1_type 1 337 0 1034 188 0 17 chr2 38341517 38341698 -212346156 + FRAM SINE Alu 1 169 -7 303 250 50 12 chr2 38342267 38342347 -212345507 - L2 LINE L2 -1 3312 3230 1510 151 87 14 chr2 38342358 38342737 -212345117 - LOR1b LTR ERV1 0 461 1 1174 256 84 23 chr2 38342806 38343296 -212344558 - L2 LINE L2 -137 3176 2566 4192 133 16 4 chr2 38343314 38344006 -212343848 - MER50 LTR ERV1 -34 700 1 1452 207 98 19 chr2 38344006 38344031 -212343823 - L2 LINE L2 -745 2569 2547 1978 95 50 21 chr2 38344031 38344314 -212343540 + AluSg SINE Alu 1 291 -19 1452 207 98 19 chr2 38344314 38344698 -212343156 - L2 LINE L2 -767 2547 2128 279 235 59 24 chr2 38344821 38344906 -212342948 - MIR3 SINE MIR -12 196 109 221 57 29 0 chr2 38344954 38344989 -212342865 + (TG)n Simple_repeat Simple_repeat 2 37 0 323 262 68 10 chr2 38345569 38345672 -212342182 - MIR SINE MIR -56 206 98 501 288 201 0 chr2 38345760 38345944 -212341910 + MIR SINE MIR 6 226 -36 2741 148 35 28 chr2 38346277 38346885 -212340969 + MER4B LTR ERV1 1 779 0 1862 122 11 8 chr2 38347197 38347460 -212340394 - AluSx SINE Alu -17 295 32 566 271 24 33 chr2 38347524 38347734 -212340120 + LTR29 LTR ERV1 141 348 -274 550 219 39 5 chr2 38347732 38347944 -212339910 + MER39 LTR ERV1 572 707 0 * 13731 185 26 10 chr2 38348106 38349257 -212338597 - L1PB1 LINE L1 -1 6866 5734 2023 130 7 13 chr2 38349257 38349585 -212338269 - AluSq SINE Alu 0 313 1 13731 185 26 10 chr2 38349585 38353815 -212334039 - L1PB1 LINE L1 -1133 5734 1392 743 221 11 0 chr2 38353812 38354002 -212333852 - L1PB1 LINE L1 -6666 197 6 * 48 0 0 0 chr2 38354497 38354545 -212333309 + AT_rich Low_complexity Low_complexity 1 48 0 550 140 43 0 chr2 38354545 38354638 -212333216 - U6 snRNA snRNA -4 103 7 1347 179 3 103 chr2 38354825 38355137 -212332717 + AluSp SINE Alu 28 308 -5 462 243 78 24 chr2 38355716 38356881 -212330973 + L1ME1 LINE L1 2149 3465 -2681 1414 152 0 27 chr2 38356893 38356927 -212330927 + AluJb SINE Alu 81 114 -198 2044 139 38 6 chr2 38356927 38357271 -212330583 - THE1A LTR MaLR 0 355 1 1414 152 0 27 chr2 38357271 38357460 -212330394 + AluJb SINE Alu 114 298 -14 1656 217 76 31 chr2 38357460 38358143 -212329711 + L1ME1 LINE L1 4628 5341 -805 1930 221 62 22 chr2 38358160 38358738 -212329116 + L1ME1 LINE L1 5560 6160 -6 21 0 0 0 chr2 38358803 38358824 -212329030 + AT_rich Low_complexity Low_complexity 1 21 0 26 23 0 23 chr2 38359170 38359198 -212328656 + AT_rich Low_complexity Low_complexity 1 29 -14 4576 38 6 0 chr2 38359198 38359748 -212328106 - L1PA5 LINE L1 -1 6153 5601 26 23 0 23 chr2 38359748 38359763 -212328091 + AT_rich Low_complexity Low_complexity 29 43 0 354 80 0 0 chr2 38359799 38359849 -212328005 + (TG)n Simple_repeat Simple_repeat 1 50 0 28 48 0 0 chr2 38360029 38360071 -212327783 + AT_rich Low_complexity Low_complexity 1 42 0 678 258 69 127 chr2 38360123 38360480 -212327374 + MER21B LTR ERV1 23 324 -539 1896 183 3 0 chr2 38360480 38360786 -212327068 - AluSx SINE Alu -5 307 1 678 258 69 127 chr2 38360786 38361106 -212326748 + MER21B LTR ERV1 324 661 -202 242 242 33 0 chr2 38362899 38362990 -212324864 + HAL1 LINE L1 1005 1098 -1409 340 247 51 75 chr2 38363160 38363452 -212324402 + L1ME4a LINE L1 5618 5902 -219 383 345 34 20 chr2 38364516 38364664 -212323190 + MIR SINE MIR 2 151 -111 425 269 187 8 chr2 38364812 38364946 -212322908 + MIR3 SINE MIR 30 187 -21 5421 145 25 11 chr2 38365150 38366131 -212321723 - L1MA4 LINE L1 -11 6289 5296 21 57 0 0 chr2 38366286 38366321 -212321533 + GC_rich Low_complexity Low_complexity 1 35 0 24 103 0 0 chr2 38367347 38367434 -212320420 + AT_rich Low_complexity Low_complexity 1 87 0 247 266 64 58 chr2 38367464 38367637 -212320217 - L1ME4a LINE L1 -102 6019 5846 471 216 69 0 chr2 38368256 38368372 -212319482 + MER103 DNA DNA 2 125 -41 180 0 0 0 chr2 38369003 38369023 -212318831 + (A)n Simple_repeat Simple_repeat 1 20 0 1340 205 79 4 chr2 38369482 38369760 -212318094 - AluJo SINE Alu -1 301 3 322 300 23 31 chr2 38369764 38369894 -212317960 - MIR SINE MIR -73 189 61 2151 217 84 11 chr2 38370111 38370573 -212317281 - MER89 LTR ERV1 0 559 53 2062 102 3 3 chr2 38370573 38370857 -212316997 - AluSg1 SINE Alu -25 284 1 2151 217 84 11 chr2 38370857 38370915 -212316939 - MER89 LTR ERV1 -506 53 1 811 162 0 22 chr2 38371145 38371281 -212316573 - FLAM_A SINE Alu 0 133 1 1088 144 21 26 chr2 38371728 38371922 -212315932 + AluJo SINE Alu 109 301 -11 2089 104 0 57 chr2 38372430 38372747 -212315107 - AluSx SINE Alu -13 299 1 24 0 0 0 chr2 38372754 38372778 -212315076 + AT_rich Low_complexity Low_complexity 1 24 0 375 267 151 48 chr2 38372867 38373108 -212314746 + L1ME4a LINE L1 5592 5887 -234 1732 51 0 0 chr2 38373108 38373323 -212314531 - L1PA3 LINE L1 -1 6154 5940 375 267 151 48 chr2 38373323 38373459 -212314395 + L1ME4a LINE L1 5887 6008 -113 214 229 14 14 chr2 38373642 38373712 -212314142 + (TA)n Simple_repeat Simple_repeat 2 71 0 475 316 37 88 chr2 38374209 38374503 -212313351 - L2 LINE L2 -5 3267 2989 255 270 160 0 chr2 38374674 38374774 -212313080 - MIR SINE MIR -59 203 88 1154 258 21 45 chr2 38374777 38375157 -212312697 - MLT1A2 LTR MaLR 0 374 4 381 58 0 0 chr2 38375198 38375250 -212312604 + (TG)n Simple_repeat Simple_repeat 2 53 0 659 268 49 12 chr2 38375800 38375964 -212311890 - MER5B DNA MER1_type -2 176 7 258 277 15 0 chr2 38376244 38376309 -212311545 - L2 LINE L2 0 3313 3248 488 278 23 15 chr2 38376924 38377057 -212310797 + MIR SINE MIR 20 153 -109 487 235 93 37 chr2 38377406 38377438 -212310416 - MIR SINE MIR -43 219 190 1780 136 4 8 chr2 38377438 38377696 -212310158 - AluJb SINE Alu -23 289 33 487 235 93 37 chr2 38377696 38377825 -212310029 - MIR SINE MIR -72 190 49 453 50 0 0 chr2 38379531 38379591 -212308263 + (TG)n Simple_repeat Simple_repeat 1 60 0 652 239 111 114 chr2 38380465 38380783 -212307071 - MLT1G LTR MaLR -285 310 1 4342 225 81 20 chr2 38380946 38383187 -212304667 - L1ME2 LINE L1 -9 6224 3844 325 245 214 47 chr2 38383204 38383396 -212304458 - MLT1F LTR MaLR -130 412 189 221 203 34 0 chr2 38383409 38383468 -212304386 + GA-rich Low_complexity Low_complexity 2 62 0 2272 255 42 33 chr2 38383468 38385441 -212302413 - L1ME2 LINE L1 -2968 3247 1298 1476 281 83 56 chr2 38385444 38386306 -212301548 - L1ME2 LINE L1 -5253 1143 245 2091 151 0 0 chr2 38386306 38386597 -212301257 - AluSx SINE Alu -21 291 1 1476 281 83 56 chr2 38386597 38386794 -212301060 - L1ME2 LINE L1 -6151 245 55 274 171 29 0 chr2 38387627 38387697 -212300157 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 319 286 86 29 chr2 38387777 38387917 -212299937 + MIR SINE MIR 115 262 0 248 70 23 0 chr2 38388077 38388120 -212299734 + (CCCTG)n Simple_repeat Simple_repeat 2 45 0 3100 83 4 20 chr2 38388448 38388905 -212298949 + L1PB1 LINE L1 5701 6150 -1 418 245 46 46 chr2 38389031 38389182 -212298672 + LTR50 LTR ERVL 17 167 -628 688 301 85 22 chr2 38389243 38389562 -212298292 + LTR50 LTR ERVL 344 682 -113 1356 161 8 39 chr2 38389586 38389841 -212298013 + Tigger7 DNA MER2_type 1 247 -2240 548 174 10 0 chr2 38389849 38389947 -212297907 + Tigger7 DNA MER2_type 2489 2587 0 941 103 0 7 chr2 38389987 38390132 -212297722 + (TTCCC)n Simple_repeat Simple_repeat 3 146 0 477 300 51 27 chr2 38390994 38391287 -212296567 + ERVL LTR ERVL 972 1271 -4493 356 243 19 35 chr2 38391313 38391470 -212296384 + MER58B DNA MER1_type 60 341 0 364 237 67 59 chr2 38392816 38392951 -212294903 + L3 LINE CR1 767 902 -675 243 352 29 0 chr2 38393541 38393646 -212294208 - MIR SINE MIR -60 148 41 410 231 0 9 chr2 38395086 38395194 -212292660 - MER103 DNA DNA -58 108 2 206 358 100 42 chr2 38397700 38397890 -212289964 + L2 LINE L2 2558 2758 -556 1598 180 29 0 chr2 38397980 38398289 -212289565 - AluSx SINE Alu 0 317 1 453 281 122 13 chr2 38398389 38398575 -212289279 + L1ME4a LINE L1 5649 5868 -253 6810 124 58 17 chr2 38398575 38399162 -212288692 - Tigger3b DNA MER2_type -1797 1231 669 1802 157 3 38 chr2 38399162 38399480 -212288374 - AluJo SINE Alu -5 307 1 6810 124 58 17 chr2 38399480 38400074 -212287780 - Tigger3b DNA MER2_type -2359 669 2 453 281 122 13 chr2 38400074 38400125 -212287729 + L1ME4a LINE L1 5868 5912 -209 7448 181 28 22 chr2 38400128 38401682 -212286172 + MER52A LTR ERV1 245 1755 0 295 215 8 85 chr2 38401741 38401871 -212285983 + L1ME4a LINE L1 5999 6118 -3 234 213 39 118 chr2 38401904 38402031 -212285823 - L1ME4a LINE L1 -5 6116 6000 294 270 70 104 chr2 38402043 38402398 -212285456 - MLT1I LTR MaLR -26 383 41 1760 154 17 10 chr2 38402526 38402818 -212285036 - AluJb SINE Alu -18 294 1 661 234 77 55 chr2 38402914 38403107 -212284747 - L1ME4a LINE L1 -313 5808 5606 1662 150 54 18 chr2 38403107 38403387 -212284467 - AluJb SINE Alu -22 290 1 661 234 77 55 chr2 38403387 38403466 -212284388 - L1ME4a LINE L1 -515 5606 5530 187 244 141 26 chr2 38403594 38403672 -212284182 + L2 LINE L2 3166 3252 -61 505 136 7 57 chr2 38404199 38404339 -212283515 + (TTCTCC)n Simple_repeat Simple_repeat 3 135 0 404 289 17 33 chr2 38404347 38404527 -212283327 + Charlie8 DNA MER1_type 97 273 -2144 468 250 54 0 chr2 38404914 38405026 -212282828 - L2 LINE L2 -8 3305 3188 2984 246 142 35 chr2 38405040 38406148 -212281706 + L2 LINE L2 1936 3170 -143 1455 227 7 3 chr2 38406148 38406443 -212281411 - AluJo SINE Alu -16 296 1 2984 246 142 35 chr2 38406443 38406543 -212281311 + L2 LINE L2 3170 3258 -55 198 103 0 0 chr2 38406567 38406596 -212281258 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2189 70 42 7 chr2 38406933 38407219 -212280635 + AluSc SINE Alu 1 296 -13 253 332 63 22 chr2 38408766 38408949 -212278905 + MIR SINE MIR 20 212 -50 1357 122 5 0 chr2 38409173 38409370 -212278484 - AluSq SINE Alu -1 312 115 1029 88 22 7 chr2 38409427 38409564 -212278290 - AluSq SINE Alu -173 139 1 332 309 80 11 chr2 38409605 38409851 -212278003 - L1ME3A LINE L1 -214 5939 5669 270 291 187 3 chr2 38409852 38410168 -212277686 - L1ME3A LINE L1 -2171 5620 5247 301 293 107 94 chr2 38410183 38410576 -212277278 - L1ME3A LINE L1 -884 5245 4848 21 0 0 0 chr2 38410587 38410608 -212277246 + AT_rich Low_complexity Low_complexity 1 21 0 8476 184 27 20 chr2 38410706 38412796 -212275058 - L1PA13 LINE L1 -11 6152 4045 7941 11 0 0 chr2 38412796 38414093 -212273761 - L1PA2 LINE L1 0 6155 4859 8476 184 27 20 chr2 38414093 38415039 -212272815 - L1PA13 LINE L1 -2118 4045 3107 4383 111 23 6 chr2 38415069 38415769 -212272085 - L1MA2 LINE L1 -100 6204 5493 2052 264 7 5 chr2 38415754 38416364 -212271490 - L1ME3A LINE L1 -3027 3102 2492 * 300 283 91 36 chr2 38416429 38416838 -212271016 - L1M4 LINE L1 -2582 3564 3096 689 193 7 22 chr2 38416838 38416973 -212270881 - FLAM_A SINE Alu 0 133 1 300 283 91 36 chr2 38416973 38417288 -212270566 - L1M4 LINE L1 -3050 3096 2800 414 311 79 16 chr2 38417421 38417611 -212270243 - L1ME3A LINE L1 -5415 704 503 413 350 154 29 chr2 38417721 38418001 -212269853 - L1ME3A LINE L1 -5758 361 47 483 225 247 17 chr2 38419574 38419752 -212268102 + MIR SINE MIR 43 261 -1 1638 129 102 88 chr2 38422291 38422412 -212265442 + MLT2C2 LTR ERVL 1 119 -345 2077 127 0 35 chr2 38422412 38422728 -212265126 + AluSg SINE Alu 1 305 -5 1638 129 102 88 chr2 38422728 38423016 -212264838 + MLT2C2 LTR ERVL 119 416 -48 290 133 0 50 chr2 38423081 38423141 -212264713 + MLT2C2 LTR ERVL 464 520 0 229 284 32 51 chr2 38423189 38423291 -212264563 - L2 LINE L2 -332 2940 2848 331 284 0 10 chr2 38423984 38424086 -212263768 + LTR67 LTR ERVL 437 537 -20 296 258 41 21 chr2 38524838 38524935 -212162919 - L1MC/D LINE L1 -2179 5629 5531 732 254 43 26 chr2 38524995 38525227 -212162627 - MIR SINE MIR -21 241 6 318 336 77 9 chr2 38525287 38525626 -212162228 + L1M4 LINE L1 4475 4836 -1310 2220 108 7 0 chr2 38525869 38526164 -212161690 + AluSp SINE Alu 1 297 -16 1100 184 17 60 chr2 38526630 38526864 -212160990 + AluJb SINE Alu 87 310 -2 283 257 208 0 chr2 38526869 38526970 -212160884 + MER5A DNA MER1_type 52 173 -16 1924 154 14 14 chr2 38527095 38527451 -212160403 - L1MB8 LINE L1 0 6178 5823 1550 144 84 15 chr2 38527470 38527733 -212160121 + AluSx SINE Alu 1 281 -31 189 0 0 0 chr2 38527736 38527757 -212160097 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2645 122 9 9 chr2 38527760 38528193 -212159661 - L1MA2 LINE L1 -7 6297 5865 798 145 16 75 chr2 38528196 38528382 -212159472 - L1MB8 LINE L1 -348 5830 5656 831 74 0 0 chr2 38528389 38528497 -212159357 - L1PA5 LINE L1 -3 6151 6044 402 204 28 9 chr2 38528507 38528615 -212159239 - L1MB7 LINE L1 -1 6183 6074 2071 113 41 7 chr2 38529080 38529373 -212158481 - AluSc SINE Alu -6 303 1 2061 121 0 16 chr2 38529664 38529970 -212157884 - AluSq SINE Alu -12 301 1 1179 164 29 5 chr2 38530555 38530763 -212157091 + MER20 DNA MER1_type 3 215 -4 716 323 121 11 chr2 38531047 38531630 -212156224 - L2 LINE L2 -14 3299 2639 435 160 0 40 chr2 38531770 38531832 -212156022 + MER39 LTR ERV1 1 59 -648 3411 117 65 11 chr2 38531832 38532373 -212155481 + LTR24B LTR ERV1 1 570 -6 307 139 194 14 chr2 38532372 38532444 -212155410 + LTR48 LTR ERV1 56 140 -647 * 672 106 0 0 chr2 38532595 38532689 -212155165 - AluS SINE Alu -211 102 9 2282 139 113 128 chr2 38532689 38532845 -212155009 + LTR48 LTR ERV1 134 291 -496 2078 146 3 0 chr2 38532845 38533154 -212154700 + AluSx SINE Alu 1 310 -2 2282 139 113 128 chr2 38533154 38533661 -212154193 + LTR48 LTR ERV1 291 787 0 270 271 0 0 chr2 38534479 38534549 -212153305 - MLT1J LTR MaLR -331 180 111 1367 167 8 17 chr2 38535303 38535542 -212152312 + MLT1A1 LTR MaLR 19 255 -110 754 230 95 52 chr2 38535551 38536001 -212151853 + LTR1B LTR ERV1 39 574 -333 623 145 9 62 chr2 38536195 38536312 -212151542 + MLT1A2 LTR MaLR 256 353 -21 2251 118 48 22 chr2 38536312 38536667 -212151187 - THE1B LTR MaLR 0 364 1 623 145 9 62 chr2 38536667 38536688 -212151166 + MLT1A2 LTR MaLR 353 374 0 1720 167 78 0 chr2 38536845 38537127 -212150727 + AluSx SINE Alu 1 304 -8 786 255 102 100 chr2 38537187 38537481 -212150373 - MLT1L LTR MaLR 0 615 217 25 51 0 0 chr2 38539132 38539171 -212148683 + AT_rich Low_complexity Low_complexity 1 39 0 1690 154 64 42 chr2 38539366 38539696 -212148158 + MER1B DNA MER1_type 1 337 0 3382 139 10 33 chr2 38539697 38540273 -212147581 - MER34B LTR ERV1 0 565 3 2082 142 3 0 chr2 38540616 38540926 -212146928 - AluSx SINE Alu -1 311 1 353 254 90 22 chr2 38542326 38542460 -212145394 - MIR3 SINE MIR -17 191 49 972 205 57 91 chr2 38542910 38543392 -212144462 - MER34B LTR ERV1 0 565 93 2740 117 54 5 chr2 38543392 38543802 -212144052 + MER57B LTR ERV1 1 430 -4 972 205 57 91 chr2 38543802 38543848 -212144006 - MER34B LTR ERV1 -472 93 47 440 308 69 12 chr2 38544381 38544628 -212143226 - MIR SINE MIR 0 262 2 235 258 51 30 chr2 38545570 38545674 -212142180 - MER5A DNA MER1_type -53 126 31 249 307 80 34 chr2 38545761 38545937 -212141917 - L1ME3A LINE L1 -9 6161 5978 336 189 113 125 chr2 38545981 38546170 -212141684 - L1ME3A LINE L1 -376 5794 5607 1911 142 0 40 chr2 38546204 38546523 -212141331 - AluJb SINE Alu 0 307 1 877 246 57 17 chr2 38546534 38546911 -212140943 + L1ME LINE L1 5188 5577 -585 1510 241 74 12 chr2 38546935 38547322 -212140532 - MLT2E LTR ERVL -177 451 35 2451 184 42 22 chr2 38547322 38547387 -212140467 - MLT1D LTR MaLR 0 505 443 1862 101 0 63 chr2 38547387 38547673 -212140181 + AluSg SINE Alu 35 302 -8 2451 184 42 22 chr2 38547673 38548102 -212139752 - MLT1D LTR MaLR -62 443 1 1510 241 74 12 chr2 38548102 38548133 -212139721 - MLT2E LTR ERVL -593 35 7 1960 161 3 0 chr2 38548602 38548894 -212138960 + AluJb SINE Alu 1 293 -19 2154 117 0 7 chr2 38549190 38549518 -212138336 - AluSx SINE Alu 0 312 2 276 98 0 0 chr2 38550909 38550950 -212136904 - MADE1 DNA Mariner -4 76 36 320 259 84 7 chr2 38551828 38551971 -212135883 - Charlie7 DNA MER1_type -7 2605 2452 2256 92 14 7 chr2 38551973 38552268 -212135586 + AluSx SINE Alu 1 297 -15 252 366 36 25 chr2 38553230 38553509 -212134345 - L2 LINE L2 -708 2606 2325 400 223 21 0 chr2 38553512 38553606 -212134248 - MER94 DNA DNA 0 134 39 2382 113 0 0 chr2 38553710 38554019 -212133835 + AluSg SINE Alu 1 309 -1 295 133 50 0 chr2 38554587 38554647 -212133207 + L1ME4a LINE L1 6054 6116 -5 242 192 19 0 chr2 38555013 38555065 -212132789 - MER5C DNA MER1_type -201 123 71 232 149 0 21 chr2 38556051 38556098 -212131756 - MIR3 SINE MIR -4 204 159 555 332 70 23 chr2 38556473 38556859 -212130995 + L2 LINE L2 2910 3313 0 209 306 0 0 chr2 38556870 38556932 -212130922 - MIR SINE MIR -40 222 161 734 162 0 132 chr2 38556975 38557172 -212130682 - FRAM SINE Alu -5 171 1 1844 152 28 3 chr2 38557201 38557490 -212130364 + AluSx SINE Alu 1 296 -16 327 130 0 0 chr2 38557916 38557970 -212129884 + (A)n Simple_repeat Simple_repeat 1 54 0 270 255 236 32 chr2 38558525 38558682 -212129172 - MIR SINE MIR -56 206 18 266 318 19 9 chr2 38559346 38559453 -212128401 + MIR SINE MIR 82 189 -73 333 196 52 124 chr2 38560429 38560582 -212127272 + L2 LINE L2 3172 3313 0 933 301 125 18 chr2 38561196 38562229 -212125625 + L2 LINE L2 2005 3145 -168 590 268 106 98 chr2 38562257 38562768 -212125086 - LTR67 LTR ERVL -39 518 4 425 221 71 26 chr2 38562785 38562939 -212124915 + L2 LINE L2 3149 3309 -4 426 20 0 0 chr2 38563563 38563614 -212124240 + (TG)n Simple_repeat Simple_repeat 2 52 0 218 269 30 0 chr2 38564319 38564386 -212123468 + GA-rich Low_complexity Low_complexity 5 73 0 231 209 0 0 chr2 38564878 38564921 -212122933 + (CA)n Simple_repeat Simple_repeat 1 43 0 2241 117 0 7 chr2 38565763 38566072 -212121782 + AluSx SINE Alu 1 307 -5 415 296 105 46 chr2 38566156 38566480 -212121374 - L3 LINE CR1 -34 1543 1201 1763 173 7 13 chr2 38566637 38566943 -212120911 - AluJb SINE Alu -8 304 1 432 344 32 28 chr2 38566974 38567192 -212120662 + LTR67 LTR ERVL 66 284 -273 1366 158 0 21 chr2 38567260 38567494 -212120360 + MLT1D LTR MaLR 8 236 -269 * 1422 197 9 38 chr2 38567488 38567803 -212120051 + MLT1D LTR MaLR 199 504 -1 240 374 22 63 chr2 38568054 38568324 -212119530 + L2 LINE L2 2549 2807 -507 290 279 8 62 chr2 38568442 38568571 -212119283 + MIR SINE MIR 124 245 -17 256 326 75 48 chr2 38568670 38568817 -212119037 + L2 LINE L2 2946 3096 -176 233 241 37 0 chr2 38571013 38571067 -212116787 - L2 LINE L2 -1 3271 3216 183 42 0 0 chr2 38571131 38571155 -212116699 + (TAA)n Simple_repeat Simple_repeat 1 24 0 495 277 39 13 chr2 38571160 38571315 -212116539 - MIR SINE MIR -8 254 96 357 226 130 0 chr2 38571758 38571873 -212115981 - MER119 DNA MER1_type -2 581 452 343 280 21 11 chr2 38571882 38571975 -212115879 - MER119 DNA MER1_type -488 95 2 279 200 65 12 chr2 38572043 38572263 -212115591 + (TA)n Simple_repeat Simple_repeat 1 231 0 344 286 64 49 chr2 38573647 38574041 -212113813 + LTR33A LTR ERVL 66 523 0 268 274 102 88 chr2 38574690 38574975 -212112879 - L2 LINE L2 -461 2853 2565 271 286 134 0 chr2 38576321 38576440 -212111414 - L2 LINE L2 -1 3271 3137 2034 152 58 28 chr2 38576844 38577502 -212110352 + LTR1B LTR ERV1 110 826 0 291 28 0 0 chr2 38579187 38579223 -212108631 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1761 126 87 25 chr2 38579225 38579502 -212108352 - AluSx SINE Alu -18 294 1 23 0 0 0 chr2 38579504 38579527 -212108327 + AT_rich Low_complexity Low_complexity 1 23 0 224 258 169 11 chr2 38581789 38581878 -212105976 + MIR SINE MIR 25 127 -135 611 230 54 71 chr2 38582262 38582501 -212105353 - LTR16A LTR ERVL -13 437 203 232 186 175 72 chr2 38582533 38582630 -212105224 - MIR SINE MIR -110 152 46 2439 73 3 0 chr2 38582824 38583124 -212104730 + AluY SINE Alu 1 301 -10 1787 167 0 25 chr2 38583383 38583700 -212104154 - AluJb SINE Alu -3 309 1 276 311 65 39 chr2 38584800 38585060 -212102794 - L2 LINE L2 -56 3257 2991 2078 120 3 0 chr2 38585456 38585777 -212102077 + AluSx SINE Alu 4 325 0 288 254 0 0 chr2 38586728 38586787 -212101067 - MIR SINE MIR -184 78 20 222 37 0 0 chr2 38588454 38588481 -212099373 + (T)n Simple_repeat Simple_repeat 1 27 0 2925 264 81 24 chr2 38589220 38590042 -212097812 - L2 LINE L2 -833 2481 1586 959 101 17 6 chr2 38590042 38590220 -212097634 + (GA)n Simple_repeat Simple_repeat 1 180 0 2925 264 81 24 chr2 38590220 38590432 -212097422 - L2 LINE L2 -1728 1586 1388 531 234 168 58 chr2 38590538 38590669 -212097185 + L1MEd LINE L1 245 360 -5759 1997 128 0 7 chr2 38590669 38590994 -212096860 + AluSx SINE Alu 2 324 0 531 234 168 58 chr2 38590994 38591135 -212096719 + L1MEd LINE L1 360 548 -5571 325 275 42 78 chr2 38591513 38591706 -212096148 + L1MEd LINE L1 989 1174 -4945 754 132 0 0 chr2 38591717 38591823 -212096031 + AluJo/FLAM SINE Alu 2 107 -205 518 157 11 0 chr2 38591822 38591911 -212095943 + AluJo/FRAM SINE Alu 208 297 -15 * 236 206 132 0 chr2 38591914 38591982 -212095872 + L1MEd LINE L1 1179 1255 -4864 226 220 59 129 chr2 38592017 38592272 -212095582 + HAL1 LINE L1 1403 1639 -868 200 236 18 0 chr2 38593376 38593431 -212094423 - L2 LINE L2 -5 3308 3253 * 613 293 130 9 chr2 38593429 38593753 -212094101 + L2 LINE L2 1256 1618 -1696 1236 272 102 49 chr2 38593753 38593896 -212093958 + L2 LINE L2 2204 2338 -975 1774 179 3 13 chr2 38593896 38594209 -212093645 + AluJb SINE Alu 3 312 0 1236 272 102 49 chr2 38594209 38594925 -212092929 + L2 LINE L2 2338 3104 -209 219 318 24 72 chr2 38595534 38595666 -212092188 - MIR SINE MIR -61 147 18 2265 73 0 11 chr2 38597079 38597410 -212090444 - AluY SINE Alu 0 328 1 234 294 0 15 chr2 38597637 38597705 -212090149 - MIR SINE MIR -117 91 25 2460 76 3 0 chr2 38600199 38600500 -212087354 + AluY SINE Alu 1 302 -9 212 198 93 58 chr2 38600973 38601059 -212086795 - MIR SINE MIR -71 191 103 2172 109 21 0 chr2 38601105 38601388 -212086466 + AluSx SINE Alu 1 289 -23 896 105 126 14 chr2 38601388 38601527 -212086327 + AluSc SINE Alu 138 292 -17 1045 148 127 46 chr2 38601708 38602026 -212085828 + MSTC LTR MaLR 51 428 0 2469 81 0 0 chr2 38602307 38602604 -212085250 - AluSx SINE Alu -13 299 3 207 0 0 0 chr2 38603272 38603295 -212084559 + (CA)n Simple_repeat Simple_repeat 2 24 0 299 313 159 31 chr2 38603452 38603647 -212084207 + L3 LINE CR1 1001 1220 -357 210 250 67 0 chr2 38603769 38603829 -212084025 - MER91C DNA MER1_type -41 99 36 184 319 111 30 chr2 38603857 38603992 -212083862 + L3 LINE CR1 1279 1424 -153 393 345 41 6 chr2 38604143 38604314 -212083540 - MIR SINE MIR -84 178 2 478 239 34 40 chr2 38606458 38606634 -212081220 - MER5B DNA MER1_type -3 175 1 1457 205 23 23 chr2 38607312 38607619 -212080235 - AluJo SINE Alu -5 307 1 202 65 22 43 chr2 38607704 38607750 -212080104 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 414 293 104 27 chr2 38609772 38609841 -212078013 + MIR SINE MIR 3 65 -197 1408 225 139 26 chr2 38609841 38610295 -212077559 + MLT1D LTR MaLR 1 505 0 414 293 104 27 chr2 38610295 38610447 -212077407 + MIR SINE MIR 65 241 -21 292 364 59 0 chr2 38611439 38611675 -212076179 + MIR SINE MIR 10 259 -3 24 0 0 0 chr2 38612570 38612594 -212075260 + AT_rich Low_complexity Low_complexity 1 24 0 2014 149 0 3 chr2 38612939 38613425 -212074429 + AluJb SINE Alu 1 312 0 204 232 71 0 chr2 38613994 38614050 -212073804 - MIR SINE MIR -77 185 126 1101 265 105 58 chr2 38614069 38614642 -212073212 + L1ME4a LINE L1 5383 5982 -139 258 355 36 7 chr2 38615073 38615211 -212072643 - MER5A DNA MER1_type -1 188 47 820 264 20 51 chr2 38615437 38615691 -212072163 - MLT1F1 LTR MaLR 0 567 322 227 284 0 14 chr2 38615737 38615811 -212072043 + GA-rich Low_complexity Low_complexity 2 74 0 371 257 83 33 chr2 38615843 38616006 -212071848 - MLT1E LTR MaLR -365 184 14 1099 165 85 18 chr2 38616536 38616760 -212071094 - MER8 DNA MER2_type 0 239 1 258 239 0 0 chr2 38616760 38616831 -212071023 + (TG)n Simple_repeat Simple_repeat 2 72 0 258 327 77 19 chr2 38617679 38617887 -212069967 + MIR SINE MIR 4 223 -39 280 328 155 0 chr2 38620040 38620156 -212067698 + L2 LINE L2 3134 3267 -5 2653 43 0 0 chr2 38620853 38621153 -212066701 + AluY SINE Alu 1 300 -11 203 343 0 0 chr2 38622143 38622216 -212065638 - MIR SINE MIR -4 258 186 1336 249 29 36 chr2 38622221 38622663 -212065191 - L1ME1 LINE L1 -5 6161 5723 330 324 55 0 chr2 38623940 38624085 -212063769 + MIR SINE MIR 90 242 -20 1630 110 61 4 chr2 38624715 38624960 -212062894 + L1PB4 LINE L1 5531 5789 -367 315 122 0 0 chr2 38624961 38625010 -212062844 + (TA)n Simple_repeat Simple_repeat 2 50 0 2544 141 0 0 chr2 38625010 38625371 -212062483 + L1PB4 LINE L1 5782 6142 -14 207 0 0 0 chr2 38625371 38625394 -212062460 + (TA)n Simple_repeat Simple_repeat 2 24 0 1712 149 0 7 chr2 38625408 38625690 -212062164 - AluY SINE Alu -30 281 2 345 24 0 0 chr2 38625692 38625734 -212062120 + (TA)n Simple_repeat Simple_repeat 2 43 0 2420 96 59 36 chr2 38627766 38628122 -212059732 - THE1B LTR MaLR 0 364 1 726 293 127 30 chr2 38628383 38628848 -212059006 - LTR67 LTR ERVL -7 550 41 4058 169 25 20 chr2 38628848 38629614 -212058240 + L1MB7 LINE L1 5148 5909 -275 2099 153 86 3 chr2 38629614 38629974 -212057880 - MLT1B LTR MaLR 0 390 1 4058 169 25 20 chr2 38629974 38630027 -212057827 + L1MB7 LINE L1 5909 5960 -224 2372 107 54 28 chr2 38630027 38630381 -212057473 - THE1B LTR MaLR -1 363 1 4058 169 25 20 chr2 38630381 38630451 -212057403 + L1MB7 LINE L1 5960 6041 -143 11950 35 1 1 chr2 38630451 38632562 -212055292 + L1PA4 LINE L1 4042 6152 -3 855 130 51 0 chr2 38632562 38632700 -212055154 + L1MB8 LINE L1 6029 6173 -5 768 164 249 4 chr2 38633139 38633395 -212054459 + MER7A DNA MER2_type 1 337 0 200 204 23 0 chr2 38634485 38634529 -212053325 + (TCCA)n Simple_repeat Simple_repeat 4 48 0 2345 192 54 23 chr2 38635440 38635925 -212051929 + MLT1D LTR MaLR 6 505 0 369 43 0 0 chr2 38636690 38636737 -212051117 + (CA)n Simple_repeat Simple_repeat 2 48 0 2286 109 3 0 chr2 38636839 38637141 -212050713 + AluSq SINE Alu 1 303 -10 640 261 116 9 chr2 38638962 38639177 -212048677 - MIR SINE MIR 0 262 25 306 313 173 6 chr2 38639999 38640207 -212047647 - MIR SINE MIR -14 248 8 555 108 0 24 chr2 38642521 38642604 -212045250 + FLAM_C SINE Alu 56 136 -7 822 301 103 30 chr2 38642615 38643014 -212044840 + LTR16B LTR ERVL 37 464 0 2862 117 44 2 chr2 38643767 38644176 -212043678 + MSTB LTR MaLR 1 426 0 1272 63 31 0 chr2 38644342 38644501 -212043353 - L1PA13 LINE L1 0 6163 6000 239 290 0 14 chr2 38644670 38644739 -212043115 - L3 LINE CR1 -15 1562 1495 4958 237 77 24 chr2 38644986 38646448 -212041406 - HAL1 LINE L1 -3 2504 956 2225 150 3 33 chr2 38646448 38646807 -212041047 - MER7A DNA MER2_type 0 346 1 4958 237 77 24 chr2 38646807 38646873 -212040981 - HAL1 LINE L1 -1551 956 895 * 8546 161 43 11 chr2 38646871 38648497 -212039357 + L1 LINE L1 2659 4336 -1810 1161 250 88 0 chr2 38648490 38648762 -212039092 - HAL1 LINE L1 -1616 891 596 * 424 293 227 0 chr2 38648755 38648984 -212038870 - HAL1 LINE L1 -2226 281 1 * 307 339 30 26 chr2 38649129 38649302 -212038552 - MIR SINE MIR -62 146 19 189 286 13 39 chr2 38649507 38649584 -212038270 - L2 LINE L2 -2672 642 568 244 304 120 8 chr2 38650224 38650349 -212037505 - MIR SINE MIR 0 262 124 322 280 83 32 chr2 38650369 38650526 -212037328 + MIR SINE MIR 79 243 -19 932 237 92 100 chr2 38650654 38651195 -212036659 + MLT1H LTR MaLR 13 549 0 464 123 41 0 chr2 38652128 38652201 -212035653 + MADE1 DNA Mariner 1 76 -4 296 262 35 4 chr2 38652598 38652721 -212035133 - MIR SINE MIR -50 212 85 192 77 0 0 chr2 38652761 38652787 -212035067 + (T)n Simple_repeat Simple_repeat 1 26 0 593 198 25 0 chr2 38652941 38653062 -212034792 - MIR SINE MIR -49 213 90 2274 112 3 10 chr2 38653456 38653770 -212034084 + AluSx SINE Alu 1 312 0 696 270 32 5 chr2 38654534 38654719 -212033135 + MLT1I LTR MaLR 214 403 -6 415 286 86 14 chr2 38655585 38655725 -212032129 - MIR SINE MIR -65 197 48 290 327 94 13 chr2 38656432 38656591 -212031263 - L2 LINE L2 0 3272 3101 216 0 0 0 chr2 38658879 38658903 -212028951 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 214 191 21 0 chr2 38659680 38659727 -212028127 + L2 LINE L2 3223 3270 -2 329 353 29 18 chr2 38660670 38660840 -212027014 + MER5A DNA MER1_type 17 188 -1 196 351 0 0 chr2 38661703 38661760 -212026094 + L2 LINE L2 3175 3231 -41 210 266 16 31 chr2 38664282 38664346 -212023508 + MIR3 SINE MIR 143 205 -3 418 265 11 81 chr2 38664394 38664579 -212023275 - MER5B DNA MER1_type 0 178 7 223 304 127 71 chr2 38665328 38665739 -212022115 + L2 LINE L2 2834 3267 -5 2383 101 104 0 chr2 38665847 38666174 -212021680 - THE1B LTR MaLR -3 361 1 2347 102 0 0 chr2 38666451 38666755 -212021099 - AluSq SINE Alu -9 304 1 1405 192 50 90 chr2 38666930 38667409 -212020445 + MLT2C2 LTR ERVL 5 464 0 475 256 58 0 chr2 38669145 38669266 -212018588 - MER94 DNA DNA -5 129 2 915 205 77 17 chr2 38671953 38672187 -212015667 - L1MD3 LINE L1 -17 7978 7731 260 211 0 0 chr2 38672180 38672237 -212015617 - L1MC4a LINE L1 -943 6865 6809 * 963 233 50 50 chr2 38672267 38672670 -212015184 - HAL1b LINE L1 -2 1346 944 897 289 53 21 chr2 38672682 38673100 -212014754 - MLT1H LTR MaLR -8 541 111 331 306 112 31 chr2 38673116 38673312 -212014542 - HAL1b LINE L1 -1033 315 104 514 275 171 39 chr2 38673341 38673640 -212014214 + L2 LINE L2 2960 3299 -9 276 30 0 0 chr2 38673640 38673673 -212014181 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2265 88 7 3 chr2 38673733 38674029 -212013825 - AluSc SINE Alu -12 297 1 567 263 63 17 chr2 38675323 38675498 -212012356 + L2 LINE L2 3082 3264 -49 2108 127 3 13 chr2 38676056 38676363 -212011491 - AluSx SINE Alu -8 304 1 855 279 80 52 chr2 38676544 38676945 -212010909 + L2 LINE L2 2888 3299 -14 356 293 58 7 chr2 38677866 38678004 -212009850 + MIR SINE MIR 10 154 -54 387 229 36 0 chr2 38678166 38678249 -212009605 - MIR SINE MIR -139 123 38 350 170 290 0 chr2 38679490 38679590 -212008264 + L3b LINE CR1 1287 1415 -168 1916 205 17 7 chr2 38680430 38680840 -212007014 + L1M4 LINE L1 3764 4177 -1969 1535 176 101 3 chr2 38680842 38681138 -212006716 - MLT2C2 LTR ERVL -139 325 1 1223 174 18 0 chr2 38681138 38681362 -212006492 + L1M4 LINE L1 4862 5089 -1057 3415 141 28 0 chr2 38681421 38681988 -212005866 - L1MB5 LINE L1 -214 5960 5378 461 131 75 75 chr2 38682059 38682166 -212005688 - Charlie7 DNA MER1_type -918 1694 1588 432 211 184 0 chr2 38682166 38682280 -212005574 + MER5A DNA MER1_type 49 183 -6 462 307 39 0 chr2 38682308 38682461 -212005393 + MIR SINE MIR 102 260 -2 346 205 63 79 chr2 38682508 38682635 -212005219 - MIR SINE MIR -46 216 92 327 98 0 0 chr2 38682674 38682725 -212005129 + MADE1 DNA Mariner 30 80 0 2350 145 13 20 chr2 38683419 38683593 -212004261 + MLT1B LTR MaLR 1 175 -215 1847 160 3 26 chr2 38683593 38683900 -212003954 + AluJb SINE Alu 1 300 -12 2350 145 13 20 chr2 38683900 38684118 -212003736 + MLT1B LTR MaLR 175 390 0 499 296 19 81 chr2 38684118 38684335 -212003519 - MIR SINE MIR -4 258 58 2412 90 0 0 chr2 38684335 38684646 -212003208 - AluY SINE Alu 0 311 1 499 296 19 81 chr2 38684646 38684688 -212003166 - MIR SINE MIR -204 58 15 504 321 118 14 chr2 38685162 38685449 -212002405 - L2 LINE L2 -3 3310 2994 620 269 130 78 chr2 38685509 38685561 -212002293 - L2 LINE L2 -455 2859 2811 3957 194 25 45 chr2 38685561 38686550 -212001304 - LTR5 LTR ERVK 0 969 1 620 269 130 78 chr2 38686550 38686944 -212000910 - L2 LINE L2 -503 2811 2390 233 266 16 0 chr2 38686954 38687018 -212000836 + (TGGG)n Simple_repeat Simple_repeat 3 67 0 603 304 60 30 chr2 38687018 38687317 -212000537 - MLT1J LTR MaLR -99 412 105 262 246 14 0 chr2 38687357 38687426 -212000428 - MLT1L LTR MaLR -540 75 6 589 259 54 5 chr2 38688730 38688915 -211998939 + L3 LINE CR1 1140 1333 -244 364 209 15 0 chr2 38689127 38689194 -211998660 + L2 LINE L2 3198 3265 -7 357 284 89 41 chr2 38689912 38690081 -211997773 - MIR SINE MIR -70 192 16 2341 108 0 0 chr2 38690182 38690479 -211997375 - AluSx SINE Alu -10 302 6 208 333 32 70 chr2 38690812 38690968 -211996886 + MIR SINE MIR 58 207 -55 2612 139 29 2 chr2 38691810 38692227 -211995627 - L1MA5 LINE L1 0 6300 5873 2312 91 0 28 chr2 38692244 38692585 -211995269 + AluSg SINE Alu 1 310 0 252 235 0 0 chr2 38693909 38693977 -211993877 + (CAT)n Simple_repeat Simple_repeat 1 68 0 701 248 95 58 chr2 38693983 38694225 -211993629 - MIR SINE MIR -11 251 1 2291 116 135 5 chr2 38694938 38695317 -211992537 - MSTA LTR MaLR 0 428 1 1490 128 0 14 chr2 38695593 38695812 -211992042 + AluSg/x SINE Alu 81 296 -14 965 114 43 104 chr2 38697180 38697391 -211990463 + THE1C LTR MaLR 178 375 0 768 221 55 20 chr2 38697391 38697590 -211990264 - L1MEc LINE L1 -6154 242 37 1398 231 26 35 chr2 38698169 38698511 -211989343 + MER74A LTR ERVL 5 343 -215 630 212 34 14 chr2 38698511 38698657 -211989197 - L1MEc LINE L1 -5703 693 545 1266 153 22 22 chr2 38698657 38698880 -211988974 + MER74A LTR ERVL 336 558 0 333 230 14 0 chr2 38699334 38699408 -211988446 + MLT1F1 LTR MaLR 5 79 -488 3194 238 34 23 chr2 38699408 38700000 -211987854 - L1MEc LINE L1 -5552 844 239 1932 145 46 40 chr2 38700000 38700373 -211987481 + THE1C LTR MaLR 1 375 0 3194 238 34 23 chr2 38700373 38700577 -211987277 - L1MEc LINE L1 -6157 239 39 1640 193 0 24 chr2 38700589 38700885 -211986969 - AluJo SINE Alu -23 289 1 261 283 42 78 chr2 38703319 38703510 -211984344 + L2 LINE L2 2875 3058 -214 23 0 0 0 chr2 38703541 38703564 -211984290 + AT_rich Low_complexity Low_complexity 1 23 0 217 310 0 35 chr2 38703604 38703662 -211984192 + L2 LINE L2 3191 3246 -26 251 276 58 23 chr2 38705354 38705441 -211982413 - MER91C DNA MER1_type -32 108 19 273 359 56 25 chr2 38706071 38706269 -211981585 - L3b LINE CR1 -116 1467 1264 460 274 36 36 chr2 38706283 38706447 -211981407 - MIR3 SINE MIR -29 179 15 402 57 0 0 chr2 38707216 38707269 -211980585 + (TGG)n Simple_repeat Simple_repeat 1 53 0 459 259 157 12 chr2 38707441 38707607 -211980247 + MIR3 SINE MIR 12 201 -7 423 92 0 0 chr2 38707806 38707871 -211979983 + (TA)n Simple_repeat Simple_repeat 2 66 0 43948 50 4 0 chr2 38707871 38713985 -211973869 - L1PA5 LINE L1 -17 6137 1 266 346 26 43 chr2 38714215 38714446 -211973408 + L2 LINE L2 2868 3094 -178 245 205 188 60 chr2 38714458 38714575 -211973279 - MLT1I LTR MaLR 0 409 278 2005 151 0 7 chr2 38714608 38714906 -211972948 + AluSx SINE Alu 5 300 -12 216 355 182 9 chr2 38715139 38715249 -211972605 + L2 LINE L2 3144 3272 0 417 283 137 24 chr2 38716671 38716883 -211970971 - MIR SINE MIR -12 250 15 196 362 28 91 chr2 38718666 38718953 -211968901 + L2 LINE L2 2995 3263 -9 963 190 11 16 chr2 38719018 38719202 -211968652 - MER5A DNA MER1_type 0 189 7 533 224 63 0 chr2 38719219 38719362 -211968492 + MER104 DNA Tc2 29 180 0 698 207 93 81 chr2 38719409 38719655 -211968199 + MLT1A1 LTR MaLR 117 365 0 7155 251 72 46 chr2 38719864 38723476 -211964378 + L1ME2 LINE L1 1387 5435 -780 1430 180 35 8 chr2 38723477 38723733 -211964121 + Tigger7 DNA MER2_type 2 264 -469 463 223 0 0 chr2 38723737 38723831 -211964023 + Tigger7 DNA MER2_type 2392 2485 -2 2015 208 20 4 chr2 38723833 38724285 -211963569 + L1ME2 LINE L1 5430 5888 -345 453 206 49 80 chr2 38724297 38724339 -211963515 + L1ME2 LINE L1 5861 5903 -330 2493 83 3 0 chr2 38724339 38724651 -211963203 + AluSp SINE Alu 1 313 0 453 206 49 80 chr2 38724651 38724918 -211962936 + L1ME2 LINE L1 5903 6227 -6 191 343 45 0 chr2 38724975 38725042 -211962812 - L2 LINE L2 -1 3271 3202 1244 206 17 38 chr2 38725917 38726209 -211961645 - MLT1D LTR MaLR -218 287 2 181 71 0 143 chr2 38726242 38726284 -211961570 - MIR SINE MIR 0 262 227 233 209 209 55 chr2 38726419 38726529 -211961325 - MIR SINE MIR -120 142 16 279 303 70 21 chr2 38727872 38728014 -211959840 + L2 LINE L2 2588 2736 -578 348 318 48 79 chr2 38728060 38728326 -211959528 + L2 LINE L2 2723 2965 -348 333 0 0 0 chr2 38728326 38728363 -211959491 + (CA)n Simple_repeat Simple_repeat 2 38 0 348 318 48 79 chr2 38728363 38728459 -211959395 + L2 LINE L2 2965 3062 -251 216 328 31 0 chr2 38728494 38728558 -211959296 + L2 LINE L2 3248 3313 0 1575 181 27 24 chr2 38729225 38729523 -211958331 + AluJb SINE Alu 1 299 -13 206 359 23 23 chr2 38729912 38730043 -211957811 - MIR SINE MIR -96 166 36 828 254 198 8 chr2 38730601 38730975 -211956879 + MLT1H LTR MaLR 76 520 -29 299 67 44 0 chr2 38730976 38731021 -211956833 - MADE1 DNA Mariner 0 80 34 297 310 121 0 chr2 38731187 38731303 -211956551 - L2 LINE L2 -10 3262 3133 315 320 99 41 chr2 38731630 38731802 -211956052 + MIR3 SINE MIR 18 199 -9 13815 178 7 11 chr2 38732244 38735914 -211951940 + L1PB1 LINE L1 2496 6146 -5 1116 121 6 0 chr2 38735921 38736087 -211951767 + MER2 DNA MER2_type 83 249 -96 234 0 0 0 chr2 38736087 38736113 -211951741 + (TAAAA)n Simple_repeat Simple_repeat 1 26 0 450 307 42 34 chr2 38736765 38737003 -211950851 + L2 LINE L2 168 407 -2907 407 350 91 45 chr2 38737019 38737932 -211949922 + L2 LINE L2 2307 3261 -11 2583 45 0 16 chr2 38738782 38739095 -211948759 + AluY SINE Alu 1 308 -3 863 223 47 10 chr2 38739373 38739566 -211948288 + L1MDa LINE L1 150 349 -6191 * 3712 226 36 3 chr2 38739562 38740516 -211947338 + L1M4 LINE L1 4363 5347 -799 22 56 0 0 chr2 38741110 38741146 -211946708 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr2 38742231 38742265 -211945589 + AT_rich Low_complexity Low_complexity 1 34 0 1248 153 28 5 chr2 38742427 38742643 -211945211 - AluJb SINE Alu -6 306 86 2230 102 7 7 chr2 38742651 38742954 -211944900 - AluSg SINE Alu -7 303 1 7763 42 1 2 chr2 38744734 38746342 -211941512 - L1PA4 LINE L1 0 6155 4550 265 230 46 35 chr2 38746342 38746429 -211941425 + MIR SINE MIR 76 163 -99 287 238 250 48 chr2 38748628 38748777 -211939077 - L2 LINE L2 -229 3043 2925 2923 84 19 3 chr2 38748777 38749146 -211938708 + THE1C LTR MaLR 1 375 0 287 238 250 48 chr2 38749146 38749259 -211938595 - L2 LINE L2 -347 2925 2747 217 329 44 76 chr2 38749471 38749629 -211938225 + L2 LINE L2 3116 3268 -4 25 31 0 0 chr2 38750326 38750358 -211937496 + AT_rich Low_complexity Low_complexity 1 32 0 8638 176 80 44 chr2 38750445 38751063 -211936791 - L1MC3 LINE L1 0 7995 7401 805 189 7 7 chr2 38751063 38751211 -211936643 - FRAM SINE Alu -7 169 22 8638 176 80 44 chr2 38751211 38752930 -211934924 - L1MC3 LINE L1 -594 7401 5433 2122 182 101 22 chr2 38753376 38753882 -211933972 - MER74A LTR ERVL -12 546 1 465 246 39 78 chr2 38754491 38754670 -211933184 - MIR SINE MIR -71 191 20 502 277 8 23 chr2 38754801 38754931 -211932923 + MIR3 SINE MIR 66 193 -15 244 139 0 0 chr2 38755466 38755502 -211932352 - MLT1B LTR MaLR -2 388 353 1803 147 41 26 chr2 38755565 38755905 -211931949 - MLT1B LTR MaLR -41 349 5 3209 164 12 37 chr2 38756160 38756757 -211931097 + L1MC1 LINE L1 5751 6332 -1 1945 174 52 6 chr2 38757678 38758023 -211929831 - MLT1A1 LTR MaLR -1 364 4 23 0 0 0 chr2 38758346 38758369 -211929485 + AT_rich Low_complexity Low_complexity 1 23 0 214 303 40 40 chr2 38758440 38758516 -211929338 + L2 LINE L2 3191 3266 -6 1818 119 83 7 chr2 38759647 38759924 -211927930 - AluSg1 SINE Alu -11 298 1 191 192 211 19 chr2 38760227 38760279 -211927575 - L2 LINE L2 -5 3308 3247 1087 253 52 30 chr2 38760287 38760651 -211927203 - L2 LINE L2 0 3313 2942 239 35 0 0 chr2 38760661 38760690 -211927164 + L1MA9 LINE L1 6284 6312 0 747 263 240 20 chr2 38761726 38762118 -211925736 - L2 LINE L2 -2 3311 2834 189 111 0 28 chr2 38762717 38762753 -211925101 - MER5A DNA MER1_type -142 47 13 640 103 35 0 chr2 38763209 38763296 -211924558 + AluJ/FLAM SINE Alu 5 94 -218 414 132 0 0 chr2 38763312 38763388 -211924466 + (GGGGA)n Simple_repeat Simple_repeat 2 77 0 32 26 0 0 chr2 38763842 38763881 -211923973 + AT_rich Low_complexity Low_complexity 1 39 0 27 49 0 0 chr2 38764568 38764609 -211923245 + GC_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr2 38765312 38765337 -211922517 + GC_rich Low_complexity Low_complexity 1 25 0 194 81 27 0 chr2 38765423 38765460 -211922394 + (CCCCG)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr2 38766637 38766659 -211921195 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 38767887 38767908 -211919946 + (T)n Simple_repeat Simple_repeat 1 21 0 204 40 0 0 chr2 38768018 38768043 -211919811 + (TTA)n Simple_repeat Simple_repeat 2 26 0 472 323 30 0 chr2 38768314 38768478 -211919376 - MIR SINE MIR -20 242 74 748 212 127 0 chr2 38768604 38768793 -211919061 + MIR SINE MIR 36 248 -14 567 248 35 7 chr2 38768851 38768890 -211918964 - MIR SINE MIR -71 191 155 1740 160 108 7 chr2 38768890 38769197 -211918657 + MER44D DNA MER2_type 1 608 -1 567 248 35 7 chr2 38769197 38769298 -211918556 - MIR SINE MIR -107 155 47 391 214 58 10 chr2 38770798 38770901 -211916953 + MER103 DNA DNA 52 159 -7 207 319 168 9 chr2 38771158 38771271 -211916583 + MIR3 SINE MIR 54 184 -24 507 137 0 0 chr2 38772003 38772076 -211915778 - MLT2A2 LTR ERVL -44 409 337 2017 133 10 0 chr2 38772080 38772382 -211915472 - L1PA13 LINE L1 -19 6144 5840 189 321 38 0 chr2 38772388 38772441 -211915413 + L2 LINE L2 3132 3186 -86 2049 155 45 62 chr2 38772581 38772946 -211914908 - MLT2A2 LTR ERVL 0 554 194 2243 79 0 0 chr2 38772946 38773249 -211914605 - AluY SINE Alu 0 303 1 2049 155 45 62 chr2 38773249 38773440 -211914414 - MLT2A2 LTR ERVL -360 194 1 338 235 0 0 chr2 38773816 38773884 -211913970 + L2 LINE L2 3235 3302 -11 2056 108 0 11 chr2 38773931 38774259 -211913595 - AluSq SINE Alu 0 325 1 248 240 120 30 chr2 38775099 38775199 -211912655 - MIR3 SINE MIR 0 208 100 322 303 61 65 chr2 38775508 38775739 -211912115 - L3 LINE CR1 -694 883 654 286 77 0 39 chr2 38775981 38775992 -211911862 + (CA)n Simple_repeat Simple_repeat 1 60 0 286 77 0 39 chr2 38775992 38776044 -211911810 + (CA)n Simple_repeat Simple_repeat 2 51 0 232 192 39 39 chr2 38778656 38778734 -211909120 - MER5C DNA MER1_type 0 324 247 258 152 165 25 chr2 38778878 38778957 -211908897 - MER5C DNA MER1_type -229 95 6 1052 170 39 61 chr2 38779086 38779204 -211908650 - MER58A DNA MER1_type -2196 224 112 1251 170 9 14 chr2 38779204 38779422 -211908432 - MER20 DNA MER1_type -2 217 1 1052 170 39 61 chr2 38779422 38779532 -211908322 - MER58A DNA MER1_type -2308 112 1 21 36 0 0 chr2 38780135 38780163 -211907691 + GC_rich Low_complexity Low_complexity 1 28 0 303 270 185 57 chr2 38782602 38782954 -211904900 - L3 LINE CR1 -159 1418 1022 1502 154 7 40 chr2 38784268 38784541 -211903313 + AluJo SINE Alu 1 264 -48 2651 58 0 0 chr2 38784937 38785248 -211902606 - AluY SINE Alu 0 311 1 777 303 88 12 chr2 38785977 38786386 -211901468 - L1MC4a LINE L1 -1902 5906 5467 299 296 105 17 chr2 38786497 38786669 -211901185 + MIR SINE MIR 63 249 -13 1639 192 29 13 chr2 38787666 38787973 -211899881 - AluJo SINE Alu 0 312 1 469 136 0 37 chr2 38787973 38788046 -211899808 - FLAM_C SINE Alu -182 130 59 26 0 0 0 chr2 38788047 38788073 -211899781 + AT_rich Low_complexity Low_complexity 1 26 0 805 233 141 31 chr2 38789073 38789522 -211898332 - MLT1E LTR MaLR 0 593 1 21 36 0 0 chr2 38791942 38791970 -211895884 + AT_rich Low_complexity Low_complexity 1 28 0 1015 98 164 89 chr2 38793025 38793239 -211894615 + MER30 DNA MER1_type 1 230 0 2144 118 14 0 chr2 38796127 38796414 -211891440 - AluSx SINE Alu -21 291 1 2057 70 0 8 chr2 38796422 38796680 -211891174 - AluY SINE Alu -9 302 47 478 123 25 12 chr2 38797152 38797233 -211890621 + Tigger5 DNA MER2_type 2242 2323 0 21 0 0 0 chr2 38798517 38798538 -211889316 + AT_rich Low_complexity Low_complexity 1 21 0 1969 209 82 15 chr2 38799132 38799605 -211888249 + MLT1D LTR MaLR 1 505 0 1884 189 54 16 chr2 38799660 38800031 -211887823 + MLT1B LTR MaLR 6 390 0 2391 124 36 3 chr2 38801199 38801562 -211886292 + THE1C LTR MaLR 1 375 0 497 313 161 20 chr2 38801816 38802580 -211885274 + L2 LINE L2 1778 2649 -665 28 48 0 0 chr2 38802629 38802671 -211885183 + AT_rich Low_complexity Low_complexity 1 42 0 2417 108 19 29 chr2 38802939 38803318 -211884536 - THE1C LTR MaLR 0 375 1 237 235 0 44 chr2 38805918 38805986 -211881868 + (TG)n Simple_repeat Simple_repeat 2 66 0 424 283 38 0 chr2 38807870 38807976 -211879878 - MIR SINE MIR -132 130 21 216 303 13 13 chr2 38807996 38808072 -211879782 + MIR SINE MIR 20 95 -167 1159 209 38 0 chr2 38808114 38808325 -211879529 - MER58A DNA MER1_type 0 224 6 313 250 54 82 chr2 38809038 38809222 -211878632 + MLT1K LTR MaLR 363 541 -47 246 289 125 10 chr2 38809941 38810045 -211877809 + MIR SINE MIR 91 206 -56 439 159 0 34 chr2 38813367 38813455 -211874399 - MLT1A2-int LTR MaLR -1562 89 5 500 114 13 0 chr2 38813459 38813538 -211874316 - MLT1A2 LTR MaLR 0 428 349 * 620 202 81 90 chr2 38813521 38813744 -211874110 - MLT1A2 LTR MaLR -153 221 1 859 201 6 35 chr2 38813996 38814170 -211873684 - MER45A DNA AcHobo -7 171 3 184 255 64 0 chr2 38815725 38815772 -211872082 - L2 LINE L2 0 3272 3223 250 343 20 10 chr2 38816269 38816368 -211871486 - MIR SINE MIR -59 149 50 227 304 143 0 chr2 38816475 38816587 -211871267 + MIR SINE MIR 4 131 -131 25 0 0 0 chr2 38816734 38816759 -211871095 + AT_rich Low_complexity Low_complexity 1 25 0 392 222 83 35 chr2 38818353 38818497 -211869357 + MIR SINE MIR 112 262 0 333 238 101 60 chr2 38818513 38818765 -211869089 + MLT1H LTR MaLR 7 300 -249 555 260 117 26 chr2 38819009 38819240 -211868614 + MIR SINE MIR 11 262 0 2382 113 13 26 chr2 38819628 38820007 -211867847 - THE1C LTR MaLR -1 374 1 192 40 0 0 chr2 38823478 38823503 -211864351 + (CA)n Simple_repeat Simple_repeat 1 25 0 348 197 30 15 chr2 38823503 38823635 -211864219 + (TA)n Simple_repeat Simple_repeat 1 134 0 342 45 0 0 chr2 38823660 38823704 -211864150 + (CA)n Simple_repeat Simple_repeat 2 45 0 665 248 111 4 chr2 38825049 38825275 -211862579 - MIR SINE MIR -5 257 8 1063 164 11 16 chr2 38825275 38825464 -211862390 - MER5A DNA MER1_type -1 188 1 233 282 24 24 chr2 38825522 38825607 -211862247 - MER5B DNA MER1_type -93 85 1 516 196 62 67 chr2 38825620 38825799 -211862055 - MER5B DNA MER1_type 0 178 1 3148 115 25 25 chr2 38826642 38826969 -211860885 - L1MA9 LINE L1 0 6312 5983 909 271 139 13 chr2 38826969 38827286 -211860568 - LTR18A LTR ERVL 0 357 1 3148 115 25 25 chr2 38827286 38827488 -211860366 - L1MA9 LINE L1 -328 5984 5783 222 171 0 0 chr2 38827488 38827529 -211860325 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 295 187 0 27 chr2 38827558 38827633 -211860221 - L1M3 LINE L1 -541 6029 5957 * 2046 152 18 23 chr2 38827622 38828018 -211859836 - L1M3 LINE L1 -766 5616 5223 3279 137 8 29 chr2 38828025 38828655 -211859199 - L1M3 LINE L1 -2111 4271 3655 1173 238 70 57 chr2 38828663 38829421 -211858433 - L1M3 LINE L1 -3580 2802 2027 355 188 0 14 chr2 38829449 38829518 -211858336 + Tigger2 DNA MER2_type 2 69 -2649 * 2422 131 61 19 chr2 38829508 38829936 -211857918 + Tigger2 DNA MER2_type 2273 2718 0 277 270 56 11 chr2 38830062 38830151 -211857703 - MER5A DNA MER1_type -1 188 96 * 378 176 15 0 chr2 38830084 38830152 -211857702 + MER5A DNA MER1_type 37 105 -84 2900 225 56 18 chr2 38830521 38831707 -211856147 - L1M2 LINE L1 -4168 2043 851 898 239 30 83 chr2 38831715 38832101 -211855753 - MLT1A1 LTR MaLR 0 365 1 2614 265 36 32 chr2 38832101 38832736 -211855118 - L1M2 LINE L1 -5337 804 164 239 0 32 0 chr2 38832736 38832767 -211855087 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2614 265 36 32 chr2 38832767 38832930 -211854924 - L1M2 LINE L1 -5977 164 3 484 173 19 0 chr2 38833155 38833259 -211854595 + MER53 DNA DNA 1 106 -83 213 360 73 0 chr2 38833644 38833780 -211854074 - L2 LINE L2 -740 2574 2429 396 0 0 0 chr2 38833838 38833882 -211853972 + (TG)n Simple_repeat Simple_repeat 2 45 0 230 253 136 19 chr2 38834334 38834488 -211853366 + L1MCc LINE L1 1291 1462 -4961 355 242 24 32 chr2 38834630 38834754 -211853100 + L1ME1 LINE L1 6037 6159 -7 180 179 0 0 chr2 38834920 38834959 -211852895 + CT-rich Low_complexity Low_complexity 2 40 0 36265 86 9 8 chr2 38836817 38842944 -211844910 + L1PA6 LINE L1 11 6138 -16 205 190 1 19 chr2 38842950 38843011 -211844843 + A-rich Low_complexity Low_complexity 2 44 0 356 257 105 51 chr2 38843202 38843381 -211844473 + HAL1b LINE L1 76 244 -1104 2215 99 24 0 chr2 38843381 38843674 -211844180 + AluSc SINE Alu 1 300 -9 356 257 105 51 chr2 38843674 38844344 -211843510 + HAL1b LINE L1 244 1032 -316 2315 103 0 6 chr2 38844344 38844656 -211843198 - AluSg SINE Alu 0 310 1 356 257 105 51 chr2 38844656 38844798 -211843056 + HAL1b LINE L1 1032 1165 -183 2382 146 17 15 chr2 38844833 38844853 -211843001 - MSTB1 LTR MaLR -12 420 402 234 81 0 0 chr2 38844853 38844890 -211842964 + (TA)n Simple_repeat Simple_repeat 2 38 0 2382 146 17 15 chr2 38844890 38845274 -211842580 - MSTB1 LTR MaLR -30 402 15 248 278 28 37 chr2 38845274 38845382 -211842472 + HAL1b LINE L1 1192 1298 -50 726 186 0 8 chr2 38845421 38845545 -211842309 - FLAM_C SINE Alu -20 123 1 273 98 0 0 chr2 38847067 38847108 -211840746 + (TC)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr2 38847203 38847233 -211840621 + AT_rich Low_complexity Low_complexity 1 30 0 767 219 135 21 chr2 38847611 38847848 -211840006 - MER58 DNA MER1_type -2150 270 7 215 268 85 24 chr2 38847959 38848041 -211839813 - MIR SINE MIR -76 186 100 490 318 99 67 chr2 38848044 38848646 -211839208 - L2 LINE L2 -1 3271 2652 225 341 59 15 chr2 38848616 38848751 -211839103 - MIR3 SINE MIR -23 185 45 * 1551 175 36 39 chr2 38849134 38849443 -211838411 + AluJo SINE Alu 1 308 -4 1062 160 5 0 chr2 38849580 38849767 -211838087 - MER2 DNA MER2_type -135 210 23 412 173 0 0 chr2 38851064 38851139 -211836715 + L1MA9 LINE L1 6200 6274 -38 1118 265 22 34 chr2 38851184 38851596 -211836258 + LTR16B LTR ERVL 44 450 -14 492 32 0 0 chr2 38851904 38851966 -211835888 + (TG)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr2 38852485 38852507 -211835347 + AT_rich Low_complexity Low_complexity 1 22 0 345 161 35 0 chr2 38852652 38852739 -211835115 + CT-rich Low_complexity Low_complexity 2 91 0 189 147 0 0 chr2 38853501 38853535 -211834319 + (CA)n Simple_repeat Simple_repeat 2 35 0 1127 181 11 26 chr2 38853555 38853826 -211834028 + L1MC3 LINE L1 7494 7760 -25 22 35 0 0 chr2 38854892 38854921 -211832933 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 38855011 38855048 -211832806 + AT_rich Low_complexity Low_complexity 1 37 0 617 293 76 41 chr2 38855169 38855606 -211832248 + MLT1J2 LTR MaLR 4 409 0 2108 113 19 49 chr2 38856886 38857256 -211830598 - THE1B LTR MaLR -5 359 1 280 262 69 69 chr2 38857423 38857568 -211830286 + MIR SINE MIR 47 191 -71 2183 146 29 0 chr2 38857890 38858240 -211829614 + MLT1A1 LTR MaLR 5 364 -1 1025 155 0 0 chr2 38860209 38860364 -211827490 - FRAM SINE Alu -11 165 11 326 197 151 92 chr2 38860485 38860553 -211827301 - LTR16A1 LTR ERVL -2 455 392 3914 89 15 0 chr2 38860553 38861092 -211826762 + L1PA14 LINE L1 5606 6152 -9 326 197 151 92 chr2 38861092 38861262 -211826592 - LTR16A1 LTR ERVL -65 392 203 2154 117 0 0 chr2 38861468 38861758 -211826096 + AluSg SINE Alu 3 292 -18 2009 91 4 0 chr2 38861840 38862094 -211825760 + AluSc SINE Alu 40 294 -15 1674 178 7 7 chr2 38862316 38862602 -211825252 - AluSx SINE Alu -26 286 1 202 250 36 0 chr2 38863006 38863062 -211824792 + (CATA)n Simple_repeat Simple_repeat 3 60 0 399 286 33 0 chr2 38863063 38863154 -211824700 - MIR SINE MIR -79 129 36 235 244 26 64 chr2 38863509 38863587 -211824267 - MIR3 SINE MIR -1 207 133 598 325 16 11 chr2 38863730 38863921 -211823933 - MIR SINE MIR -50 212 21 1127 276 42 47 chr2 38864084 38864284 -211823570 - L2 LINE L2 -14 3299 3100 279 0 0 0 chr2 38864284 38864315 -211823539 + (TG)n Simple_repeat Simple_repeat 1 31 0 1127 276 42 47 chr2 38864315 38864542 -211823312 - L2 LINE L2 -213 3100 2874 248 211 0 0 chr2 38864962 38865014 -211822840 - MIR3 SINE MIR -48 160 109 201 329 110 27 chr2 38865421 38865567 -211822287 + L2 LINE L2 2933 3090 -182 1091 226 10 48 chr2 38917662 38917972 -211769882 + AluSx SINE Alu 5 302 0 2142 89 30 7 chr2 38918266 38918569 -211769285 - AluSx SINE Alu -2 310 1 583 143 71 29 chr2 38920494 38920634 -211767220 - MER104 DNA Tc2 -3 177 32 2705 78 120 0 chr2 38920674 38921074 -211766780 - LTR7 LTR ERV1 -2 448 1 2219 113 50 18 chr2 38921074 38921454 -211766400 - HERVH LTR ERV1 0 7713 7322 1398 134 18 5 chr2 38921452 38921669 -211766185 - HERVH LTR ERV1 -1894 5819 5600 * 4512 136 1 3 chr2 38921670 38922333 -211765521 - HERVH LTR ERV1 -2564 5149 4488 3558 95 4 6 chr2 38922335 38922838 -211765016 - HERVH LTR ERV1 -3720 3993 3492 900 142 20 0 chr2 38922828 38922976 -211764878 - HERVH LTR ERV1 -4423 3290 3140 * 20821 90 14 25 chr2 38922970 38925989 -211761865 - HERVH LTR ERV1 -4726 2987 1 2613 91 126 0 chr2 38925991 38926389 -211761465 - LTR7 LTR ERV1 -2 448 1 559 176 101 91 chr2 38926764 38926963 -211760891 + L1MC4 LINE L1 7842 8042 0 241 323 10 35 chr2 38927440 38927624 -211760230 + CT-rich Low_complexity Low_complexity 1 179 0 2024 130 13 0 chr2 38927992 38928300 -211759554 - AluSx SINE Alu 0 312 1 663 123 0 0 chr2 38928621 38928743 -211759111 + (TC)n Simple_repeat Simple_repeat 1 122 0 693 318 147 49 chr2 38929042 38929636 -211758218 - L3 LINE CR1 -174 1403 752 325 310 100 53 chr2 38929986 38930048 -211757806 - L1MC4a LINE L1 -1961 5847 5789 181 111 0 0 chr2 38930048 38930075 -211757779 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1877 132 11 7 chr2 38930075 38930356 -211757498 - AluJb SINE Alu -30 282 1 325 310 100 53 chr2 38930356 38930592 -211757262 - L1MC4a LINE L1 -2018 5790 5534 742 282 39 20 chr2 38931002 38931257 -211756597 + MIR SINE MIR 2 261 -1 611 290 40 52 chr2 38931465 38931717 -211756137 + MIR SINE MIR 13 261 -1 807 86 0 0 chr2 38932875 38932980 -211754874 - FLAM_A SINE Alu -5 137 33 510 330 24 15 chr2 38933185 38933391 -211754463 - MIR SINE MIR -29 233 26 1775 197 133 25 chr2 38933923 38934395 -211753459 - Charlie1b DNA MER1_type 0 523 1 2448 47 0 7 chr2 38934420 38934718 -211753136 + AluY SINE Alu 1 296 -15 198 0 0 0 chr2 38934734 38934756 -211753098 + (TG)n Simple_repeat Simple_repeat 1 22 0 545 305 38 30 chr2 38935272 38935508 -211752346 - MIR SINE MIR -2 260 23 193 313 52 31 chr2 38936725 38936821 -211751033 + MIR SINE MIR 47 144 -118 668 267 37 0 chr2 38936874 38937035 -211750819 + MIR3 SINE MIR 30 196 -12 26 30 0 0 chr2 38937062 38937095 -211750759 + AT_rich Low_complexity Low_complexity 1 33 0 369 0 0 0 chr2 38939398 38939439 -211748415 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 293 0 0 26 chr2 38939856 38939894 -211747960 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 201 108 0 0 chr2 38940018 38940055 -211747799 + (T)n Simple_repeat Simple_repeat 1 37 0 479 354 134 15 chr2 38940306 38940716 -211747138 + L2 LINE L2 2855 3313 0 310 332 66 53 chr2 38940883 38941184 -211746670 - L2 LINE L2 -1802 1512 1208 786 259 79 27 chr2 38941257 38941624 -211746230 + L1ME4a LINE L1 5615 6000 -121 4693 167 30 3 chr2 38941714 38942578 -211745276 - L1PA13 LINE L1 -992 5154 4268 6671 103 11 0 chr2 38942578 38943593 -211744261 + L1PA13 LINE L1 5141 6163 0 420 295 31 106 chr2 38943911 38943983 -211743871 - MIR SINE MIR -6 256 180 2394 91 3 0 chr2 38943983 38944292 -211743562 + AluY SINE Alu 1 310 -1 420 295 31 106 chr2 38944292 38944446 -211743408 - MIR SINE MIR -82 180 47 1920 183 86 3 chr2 38945169 38945529 -211742325 + MLT1B LTR MaLR 1 390 0 693 247 172 62 chr2 38945533 38945906 -211741948 - LTR16A LTR ERVL -12 438 25 1380 174 68 95 chr2 38947010 38947225 -211740629 + LTR9 LTR ERV1 3 205 -407 2308 84 6 40 chr2 38947225 38947266 -211740588 - AluSg SINE Alu 0 310 269 180 77 0 0 chr2 38947266 38947292 -211740562 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2308 84 6 40 chr2 38947292 38947571 -211740283 - AluSg SINE Alu -41 269 1 1380 174 68 95 chr2 38947571 38947723 -211740131 + LTR9 LTR ERV1 205 360 -252 3864 110 23 5 chr2 38947886 38948448 -211739406 - MER41B LTR ERV1 -63 572 1 601 234 86 6 chr2 38949011 38949186 -211738668 + LTR37B LTR ERV1 3 191 -277 559 183 39 0 chr2 38949197 38949301 -211738553 + MER20 DNA MER1_type 112 219 0 475 254 163 29 chr2 38952096 38952305 -211735549 + MIR SINE MIR 16 252 -10 231 193 211 0 chr2 38953776 38953833 -211734021 - L2 LINE L2 -14 3299 3231 1994 141 7 0 chr2 38954133 38954431 -211733423 - AluSx SINE Alu -12 300 1 2162 72 31 7 chr2 38954757 38955048 -211732806 - AluSx SINE Alu -14 298 1 26 30 0 0 chr2 38956321 38956354 -211731500 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 38956660 38956682 -211731172 + AT_rich Low_complexity Low_complexity 1 22 0 1647 162 32 0 chr2 38957031 38957315 -211730539 + AluJo SINE Alu 1 293 -19 374 207 69 11 chr2 38957685 38957772 -211730082 + MIR SINE MIR 71 162 -100 1075 244 46 37 chr2 38958859 38959207 -211728647 + L2 LINE L2 1347 1697 -1617 798 179 114 46 chr2 38959247 38959527 -211728327 - L1MEc LINE L1 -4182 2214 1916 971 154 5 77 chr2 38960436 38960644 -211727210 + MER3 DNA MER1_type 6 198 -11 260 26 0 26 chr2 38962417 38962455 -211725399 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 9716 24 3 209 chr2 38962455 38964173 -211723681 - SVA Other Other -20 1366 3 24 0 0 0 chr2 38964225 38964249 -211723605 + AT_rich Low_complexity Low_complexity 1 24 0 183 49 73 0 chr2 38964887 38964928 -211722926 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 314 281 94 35 chr2 38966052 38966255 -211721599 - L1ME3 LINE L1 -224 5938 5724 31497 113 13 59 chr2 38966260 38972714 -211715140 - L1PA7 LINE L1 0 6154 9 461 324 100 9 chr2 38972727 38973076 -211714778 - L1ME3 LINE L1 -435 5727 5347 324 219 171 0 chr2 38973120 38973202 -211714652 - L2 LINE L2 -2 3311 3216 338 300 140 13 chr2 38973721 38973871 -211713983 + MIR SINE MIR 8 176 -86 953 165 104 0 chr2 38974708 38974872 -211712982 - MER58A DNA MER1_type -43 181 1 342 322 39 81 chr2 38974919 38975276 -211712578 - L2 LINE L2 -1358 1956 1615 330 230 150 35 chr2 38975630 38975743 -211712111 - L2 LINE L2 0 3313 3188 244 250 31 0 chr2 38976044 38976108 -211711746 - MIR SINE MIR -36 226 161 359 182 15 121 chr2 38976415 38976547 -211711307 + MER104 DNA Tc2 1 118 -62 214 267 0 100 chr2 38976838 38976928 -211710926 + L2 LINE L2 3232 3312 -1 220 366 73 49 chr2 38976933 38977220 -211710634 - L2 LINE L2 -1979 1335 1042 26 30 0 0 chr2 38977384 38977417 -211710437 + AT_rich Low_complexity Low_complexity 1 33 0 1605 153 54 0 chr2 38977417 38977678 -211710176 - L1PB4 LINE L1 -2 6154 5880 759 224 0 33 chr2 38978443 38978629 -211709225 + MER5A DNA MER1_type 5 183 -6 1754 249 27 27 chr2 38979512 38979958 -211707896 + LTR40c LTR ERVL 8 453 -12 25 51 0 0 chr2 38983242 38983281 -211704573 + AT_rich Low_complexity Low_complexity 1 39 0 9016 197 26 17 chr2 38983552 38985845 -211702009 - L1MB3 LINE L1 -27 6392 4061 2795 70 3 3 chr2 38985845 38986200 -211701654 + THE1A LTR MaLR 1 355 0 9016 197 26 17 chr2 38986200 38987006 -211700848 - L1MB3 LINE L1 -2358 4061 3264 29960 108 11 30 chr2 38987014 38993522 -211694332 - L1PA7 LINE L1 0 6469 2 6475 74 15 23 chr2 38993674 38994602 -211693252 - SVA Other Other -1 1385 465 4598 208 72 47 chr2 38994640 38996494 -211691360 - L1MB3 LINE L1 -3101 3281 1368 2345 82 14 0 chr2 38996494 38996786 -211691068 + AluY SINE Alu 1 296 -15 4598 208 72 47 chr2 38996786 38997097 -211690757 - L1MB3 LINE L1 -5014 1368 1066 8322 119 16 12 chr2 38997102 38998395 -211689459 + HSMAR2 DNA Mariner 5 1301 -1 2183 101 13 7 chr2 38998513 38998820 -211689034 + AluSx SINE Alu 1 309 -3 867 271 130 16 chr2 38999465 39000141 -211687713 - L1M4 LINE L1 -1363 4783 4031 230 185 33 22 chr2 39000202 39000294 -211687560 + CT-rich Low_complexity Low_complexity 1 93 0 1459 191 65 0 chr2 39000308 39000570 -211687284 - AluJb SINE Alu -33 279 1 452 312 40 15 chr2 39000707 39001000 -211686854 - L1M4 LINE L1 -2309 3837 3530 229 224 86 0 chr2 39001177 39001235 -211686619 - L1MB7 LINE L1 -37 6147 6085 * 1989 189 30 61 chr2 39001209 39001798 -211686056 - L1MB7 LINE L1 -817 5329 4787 1590 288 68 10 chr2 39001807 39002637 -211685217 - L1M4 LINE L1 -1065 5081 4204 2277 249 54 11 chr2 39002637 39003265 -211684589 - L2 LINE L2 -275 3038 2386 1128 274 98 30 chr2 39003750 39004351 -211683503 - L2 LINE L2 -2 3311 2679 31 0 0 0 chr2 39004706 39004737 -211683117 + AT_rich Low_complexity Low_complexity 1 31 0 29 60 0 0 chr2 39004829 39004879 -211682975 + AT_rich Low_complexity Low_complexity 1 50 0 233 29 29 0 chr2 39004993 39005027 -211682827 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 2687 53 18 0 chr2 39005723 39006064 -211681790 + L1PA7 LINE L1 5804 6150 -4 308 192 0 125 chr2 39006457 39006577 -211681277 + L1MC5 LINE L1 7809 7913 -48 9877 58 11 102 chr2 39007194 39008706 -211679148 - SVA Other Other 0 1386 12 190 381 71 32 chr2 39008723 39008849 -211679005 - L2 LINE L2 -25 3247 3117 587 170 0 2 chr2 39008898 39009132 -211678722 + AluJo SINE Alu 1 282 -30 351 0 0 0 chr2 39009132 39009171 -211678683 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 39010430 39010453 -211677401 + AT_rich Low_complexity Low_complexity 1 23 0 2284 109 0 0 chr2 39010656 39010958 -211676896 - AluSx SINE Alu -10 302 1 631 277 41 62 chr2 39011068 39011310 -211676544 + L2 LINE L2 3031 3267 -5 737 190 50 17 chr2 39011386 39011565 -211676289 - MER5A DNA MER1_type -1 188 4 38 61 0 0 chr2 39012235 39012301 -211675553 + AT_rich Low_complexity Low_complexity 1 66 0 185 200 11 44 chr2 39013368 39013458 -211674396 + CT-rich Low_complexity Low_complexity 2 88 0 21 0 0 0 chr2 39013883 39013904 -211673950 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 39014073 39014098 -211673756 + AT_rich Low_complexity Low_complexity 1 25 0 677 165 253 0 chr2 39014204 39014374 -211673480 + MER58A DNA MER1_type 9 221 -3 22 35 0 0 chr2 39015201 39015230 -211672624 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 39015733 39015756 -211672098 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 784 300 116 16 chr2 39015761 39016148 -211671706 + L3 LINE CR1 399 824 -753 634 148 25 169 chr2 39016182 39016419 -211671435 + L1MC3 LINE L1 7562 7764 -21 2990 238 47 57 chr2 39016616 39017634 -211670220 + L1M4 LINE L1 3446 4453 -1693 3031 157 10 34 chr2 39017652 39018131 -211669723 + L1MC1 LINE L1 5751 6215 -118 2149 129 0 0 chr2 39018131 39018425 -211669429 + AluSx SINE Alu 1 294 -18 3031 157 10 34 chr2 39018425 39018536 -211669318 + L1MC1 LINE L1 6215 6327 -6 435 256 56 0 chr2 39019598 39019723 -211668131 - MIR SINE MIR -10 252 121 21 36 0 0 chr2 39020024 39020052 -211667802 + AT_rich Low_complexity Low_complexity 1 28 0 2222 76 23 23 chr2 39020216 39020517 -211667337 + AluY SINE Alu 1 301 -10 2424 91 0 0 chr2 39020591 39020898 -211666956 + AluSx SINE Alu 1 307 -5 46 92 0 0 chr2 39021772 39021902 -211665952 + AT_rich Low_complexity Low_complexity 1 130 0 536 339 42 17 chr2 39022398 39022634 -211665220 - MIR SINE MIR -14 248 7 455 185 17 101 chr2 39023192 39023261 -211664593 - MIR SINE MIR -152 110 54 2073 119 6 31 chr2 39023261 39023579 -211664275 - AluSx SINE Alu -2 310 1 455 185 17 101 chr2 39023579 39023628 -211664226 - MIR SINE MIR -208 54 2 181 242 0 0 chr2 39024184 39024217 -211663637 - L2 LINE L2 -865 2449 2417 666 331 19 19 chr2 39024259 39024628 -211663226 + L1ME3A LINE L1 489 857 -5262 823 232 85 17 chr2 39024901 39025207 -211662647 + L1ME1 LINE L1 5342 5712 -466 1351 200 83 3 chr2 39025214 39025514 -211662340 + L1ME1 LINE L1 5838 6161 -5 277 208 38 0 chr2 39025622 39025675 -211662179 + Tigger7 DNA MER2_type 2431 2485 -6 396 0 0 0 chr2 39025677 39025721 -211662133 + (CTA)n Simple_repeat Simple_repeat 3 46 0 611 313 76 16 chr2 39025734 39026184 -211661670 + L1ME3A LINE L1 2337 2813 -3316 309 332 43 28 chr2 39026183 39026394 -211661460 + L1ME3A LINE L1 5393 5606 -539 * 252 271 38 23 chr2 39026461 39026594 -211661260 + L1ME3A LINE L1 5800 5934 -219 1789 166 13 25 chr2 39026659 39026973 -211660881 + AluJo SINE Alu 3 312 0 231 267 27 0 chr2 39027612 39027697 -211660157 + (TA)n Simple_repeat Simple_repeat 1 87 0 1758 161 11 7 chr2 39028599 39028885 -211658969 + AluJo SINE Alu 1 287 -25 180 274 0 59 chr2 39028947 39028998 -211658856 - MIR3 SINE MIR -23 185 138 957 240 59 2 chr2 39029521 39029758 -211658096 + MIR SINE MIR 2 248 -14 449 324 56 44 chr2 39030174 39030424 -211657430 + MIR SINE MIR 10 262 0 424 248 20 0 chr2 39030588 39030689 -211657165 + MER5B DNA MER1_type 1 103 -75 2405 189 42 36 chr2 39030693 39030718 -211657136 - L1ME1 LINE L1 -9 6157 6133 1339 249 48 55 chr2 39030718 39031304 -211656550 - L1MB4 LINE L1 -40 6140 5559 359 282 78 10 chr2 39031524 39031627 -211656227 - L2 LINE L2 -4 3309 3200 413 306 62 12 chr2 39032567 39032825 -211655029 + L1ME4a LINE L1 5597 5867 -254 232 175 70 0 chr2 39032898 39032955 -211654899 - L1MA9 LINE L1 0 6312 6252 2103 102 4 0 chr2 39033625 39033899 -211653955 + AluSq SINE Alu 1 275 -38 600 101 0 0 chr2 39033901 39033990 -211653864 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 2043 111 55 3 chr2 39034693 39035036 -211652818 - L1MA9 LINE L1 -3 6309 5949 41409 45 1 2 chr2 39035050 39041213 -211646641 - L1PA4 LINE L1 -2 6153 2 506 307 118 64 chr2 39042213 39042801 -211645053 + L2 LINE L2 2600 3267 -5 2249 81 0 17 chr2 39044279 39044577 -211643277 + AluSp SINE Alu 1 293 -20 22 35 0 0 chr2 39044817 39044846 -211643008 + AT_rich Low_complexity Low_complexity 1 29 0 288 333 46 0 chr2 39045128 39045215 -211642639 - L2 LINE L2 -46 3226 3136 2391 97 0 0 chr2 39045639 39045947 -211641907 + AluSc SINE Alu 1 308 -1 27 29 0 0 chr2 39047334 39047368 -211640486 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 39047860 39047888 -211639966 + AT_rich Low_complexity Low_complexity 1 28 0 507 319 151 54 chr2 39047985 39048106 -211639748 + L1ME4a LINE L1 5327 5435 -686 2762 133 11 5 chr2 39048106 39048551 -211639303 - LTR7 LTR ERV1 -2 448 1 507 319 151 54 chr2 39048551 39049057 -211638797 + L1ME4a LINE L1 5435 6015 -106 201 147 0 0 chr2 39049229 39049263 -211638591 + (CA)n Simple_repeat Simple_repeat 1 34 0 1454 146 43 47 chr2 39050043 39050296 -211637558 + AluJb SINE Alu 38 289 -23 31 0 0 0 chr2 39050296 39050327 -211637527 + AT_rich Low_complexity Low_complexity 1 31 0 291 197 0 15 chr2 39050344 39050410 -211637444 - LTR37A LTR ERV1 -319 107 43 2009 83 7 7 chr2 39050413 39050702 -211637152 - MER1A DNA MER1_type 0 529 241 3946 113 141 35 chr2 39050710 39051712 -211636142 + pTR5 LTR ERV1 769 2024 -414 231 287 53 0 chr2 39051713 39051807 -211636047 + LTR30 LTR ERV1 544 642 -80 1512 82 0 5 chr2 39051810 39052030 -211635824 + pTR5 LTR ERV1 172 390 -2048 1161 181 39 51 chr2 39052030 39052284 -211635570 - MER1A DNA MER1_type -276 251 1 266 316 89 36 chr2 39052313 39052481 -211635373 - MIR SINE MIR -73 189 13 224 333 107 19 chr2 39053168 39053327 -211634527 - MIR3 SINE MIR -25 183 11 450 258 131 30 chr2 39053416 39053614 -211634240 - MIR SINE MIR -43 219 2 259 224 19 65 chr2 39053657 39053764 -211634090 + GA-rich Low_complexity Low_complexity 1 102 0 3207 235 23 18 chr2 39054133 39054992 -211632862 - L1ME1 LINE L1 -7 6228 5365 6210 219 65 39 chr2 39055128 39056960 -211630894 - L1ME1 LINE L1 -1234 4981 3081 1192 53 13 0 chr2 39056960 39057110 -211630744 - L1PA7 LINE L1 -2 6152 6001 6210 219 65 39 chr2 39057110 39057457 -211630397 - L1ME1 LINE L1 -3134 3081 2745 751 275 17 8 chr2 39057491 39057731 -211630123 - L1ME1 LINE L1 -6057 339 98 1483 209 69 12 chr2 39058486 39058908 -211628946 - MER69 DNA AcHobo 0 2526 2081 184 294 110 29 chr2 39059561 39059697 -211628157 + L2 LINE L2 2867 3013 -300 213 309 175 8 chr2 39059784 39059910 -211627944 + L2 LINE L2 3158 3304 -9 224 333 0 12 chr2 39060017 39060098 -211627756 + G-rich Low_complexity Low_complexity 1 80 0 2133 146 14 27 chr2 39060124 39060493 -211627361 - THE1B LTR MaLR 0 364 1 214 328 115 0 chr2 39061066 39061188 -211626666 - MIR3 SINE MIR -61 147 12 1170 112 12 0 chr2 39061610 39061771 -211626083 - FAM SINE Alu -2 47 1 2615 220 46 45 chr2 39062445 39062911 -211624943 - L1ME1 LINE L1 -5 6441 5972 2270 90 3 10 chr2 39062911 39063212 -211624642 + AluSx SINE Alu 1 299 -13 2615 220 46 45 chr2 39063212 39063545 -211624309 - L1ME1 LINE L1 -474 5972 5641 203 307 57 0 chr2 39064095 39064183 -211623671 + L2 LINE L2 2296 2388 -926 29 0 0 0 chr2 39064959 39064988 -211622866 + AT_rich Low_complexity Low_complexity 1 29 0 34 0 0 0 chr2 39065056 39065090 -211622764 + AT_rich Low_complexity Low_complexity 1 34 0 566 319 136 37 chr2 39065280 39065980 -211621874 + L1 LINE L1 4073 4841 -1305 528 256 83 11 chr2 39067405 39067607 -211620247 + MIR SINE MIR 3 218 -44 281 309 73 0 chr2 39068177 39068287 -211619567 - MIR SINE MIR -115 147 30 260 278 0 28 chr2 39068984 39069056 -211618798 + L2 LINE L2 3194 3263 -9 423 0 0 0 chr2 39069401 39069448 -211618406 + (CA)n Simple_repeat Simple_repeat 2 48 0 550 270 0 8 chr2 39069563 39069689 -211618165 - MIR SINE MIR -112 150 26 7144 208 59 70 chr2 39070288 39070399 -211617455 - L1ME1 LINE L1 -1084 5342 5231 351 0 0 0 chr2 39070399 39070438 -211617416 + (TTA)n Simple_repeat Simple_repeat 2 40 0 7144 208 59 70 chr2 39070438 39070642 -211617212 - L1ME1 LINE L1 -1195 5231 5026 1963 174 40 0 chr2 39070642 39070993 -211616861 + MLT1A1 LTR MaLR 1 365 0 7144 208 59 70 chr2 39070993 39072757 -211615097 - L1ME1 LINE L1 -1400 5026 3244 442 0 35 0 chr2 39072757 39072815 -211615039 + (CA)n Simple_repeat Simple_repeat 1 60 0 7144 208 59 70 chr2 39072815 39075177 -211612677 - L1ME1 LINE L1 -3182 3244 950 402 226 39 117 chr2 39075858 39076115 -211611739 + L1M4b LINE L1 12 248 -6611 462 280 51 100 chr2 39076274 39076685 -211611169 + L1M4b LINE L1 798 1188 -5667 24 0 0 0 chr2 39076732 39076756 -211611098 + AT_rich Low_complexity Low_complexity 1 24 0 1039 276 30 61 chr2 39076777 39077056 -211610798 + L1M4b LINE L1 1861 2116 -4843 2238 98 0 0 chr2 39077056 39077352 -211610502 + AluSg SINE Alu 1 296 -14 1039 276 30 61 chr2 39077352 39077629 -211610225 + L1M4b LINE L1 2116 2400 -4559 873 230 26 4 chr2 39077645 39077871 -211609983 + L1ME1 LINE L1 5664 5894 -272 466 214 42 30 chr2 39077884 39078052 -211609802 - L1M4 LINE L1 -1598 4548 4379 226 367 13 0 chr2 39079281 39079360 -211608494 - L2 LINE L2 -6 3266 3187 1783 149 14 11 chr2 39079927 39080203 -211607651 - AluJo SINE Alu -16 296 20 489 239 66 46 chr2 39080300 39080497 -211607357 - MIR SINE MIR -15 247 47 329 291 29 48 chr2 39080571 39080777 -211607077 + L2 LINE L2 1565 1766 -1548 1628 152 0 15 chr2 39081106 39081370 -211606484 - AluSx SINE Alu -6 306 47 5917 122 27 12 chr2 39081746 39082970 -211604884 - L1MA4A LINE L1 0 6303 5061 706 208 34 39 chr2 39084081 39084259 -211603595 - MER5B DNA MER1_type 0 178 2 22 56 0 0 chr2 39084557 39084593 -211603261 + AT_rich Low_complexity Low_complexity 1 36 0 1221 270 91 40 chr2 39085757 39086338 -211601516 - MLT1L LTR MaLR -4 611 1 180 77 0 0 chr2 39086351 39086377 -211601477 + (CA)n Simple_repeat Simple_repeat 2 27 0 252 212 12 59 chr2 39086441 39086526 -211601328 - L2 LINE L2 -3 3269 3189 212 292 62 0 chr2 39086590 39086655 -211601199 + L2 LINE L2 2986 3054 -218 1803 189 21 9 chr2 39087540 39087874 -211599980 - MER58B DNA MER1_type -3 338 1 2665 123 41 7 chr2 39087947 39088361 -211599493 + MSTA LTR MaLR 1 428 0 1204 179 5 0 chr2 39089427 39089634 -211598220 + MER3 DNA MER1_type 2 209 0 2044 112 54 3 chr2 39090239 39090415 -211597439 - AluSc SINE Alu 0 309 111 554 0 15 0 chr2 39090415 39090481 -211597373 + (TTTTA)n Simple_repeat Simple_repeat 1 67 0 2044 112 54 3 chr2 39090481 39090598 -211597256 - AluSc SINE Alu -198 111 1 194 210 32 32 chr2 39091495 39091557 -211596297 - L2 LINE L2 -212 3060 2999 245 95 0 24 chr2 39091978 39092020 -211595834 + (CA)n Simple_repeat Simple_repeat 1 41 0 437 243 27 9 chr2 39092065 39092176 -211595678 + L2 LINE L2 3188 3300 -13 1950 219 105 10 chr2 39092485 39092979 -211594875 - L1MD2 LINE L1 -226 6133 5593 * 6697 33 0 0 chr2 39092973 39093751 -211594103 - L1PA4 LINE L1 -3 6152 5375 3158 19 0 0 chr2 39093749 39094117 -211593737 + L1PA4 LINE L1 4985 5352 -794 * 569 144 65 105 chr2 39094119 39094272 -211593582 - L1MD2 LINE L1 -607 5559 5413 21 0 0 0 chr2 39094277 39094298 -211593556 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39094324 39094353 -211593501 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39094396 39094475 -211593379 - MER112 DNA MER1_type -178 82 1 2131 129 27 0 chr2 39094571 39094866 -211592988 + AluSg SINE Alu 1 303 -7 362 315 82 42 chr2 39095184 39095514 -211592340 + L1ME LINE L1 5469 5811 -359 21 0 0 0 chr2 39095720 39095741 -211592113 + AT_rich Low_complexity Low_complexity 1 21 0 1205 198 34 23 chr2 39101964 39102227 -211585627 - ORSL DNA AcHobo -1 274 9 653 203 0 0 chr2 39102595 39102713 -211585141 + FLAM_A SINE Alu 1 118 -15 28 0 0 0 chr2 39102726 39102754 -211585100 + AT_rich Low_complexity Low_complexity 1 28 0 740 164 20 108 chr2 39103010 39103205 -211584649 - MER58A DNA MER1_type 0 224 47 365 181 42 0 chr2 39103780 39103852 -211584002 + MER53 DNA DNA 15 89 -100 * 366 205 13 0 chr2 39103789 39103867 -211583987 - MER53 DNA DNA -16 173 95 22 0 0 0 chr2 39104871 39104893 -211582961 + GC_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 39106570 39106602 -211581252 + GC_rich Low_complexity Low_complexity 1 32 0 414 296 16 0 chr2 39107943 39108068 -211579786 - MIR SINE MIR -104 158 32 2139 96 6 38 chr2 39108159 39108473 -211579381 + AluSx SINE Alu 1 304 -8 2270 89 30 7 chr2 39108746 39109049 -211578805 - AluSx SINE Alu -2 310 1 591 143 71 29 chr2 39110974 39111114 -211576740 - MER104 DNA Tc2 -3 177 32 2687 78 120 0 chr2 39111154 39111554 -211576300 - LTR7 LTR ERV1 -2 448 1 2413 95 50 13 chr2 39111554 39111932 -211575922 - HERVH LTR ERV1 0 7713 7322 1399 134 18 5 chr2 39111930 39112147 -211575707 - HERVH LTR ERV1 -1894 5819 5600 * 4552 136 1 1 chr2 39112148 39112810 -211575044 - HERVH LTR ERV1 -2564 5149 4488 3589 89 4 6 chr2 39112812 39113315 -211574539 - HERVH LTR ERV1 -3720 3993 3492 888 149 20 0 chr2 39113305 39113453 -211574401 - HERVH LTR ERV1 -4423 3290 3140 * 20637 92 14 25 chr2 39113447 39116465 -211571389 - HERVH LTR ERV1 -4726 2987 1 2653 85 126 0 chr2 39116467 39116865 -211570989 - LTR7 LTR ERV1 -2 448 1 560 176 101 91 chr2 39117240 39117439 -211570415 + L1MC4 LINE L1 7842 8042 0 241 323 10 35 chr2 39117916 39118100 -211569754 + CT-rich Low_complexity Low_complexity 1 179 0 2155 118 14 0 chr2 39118479 39118776 -211569078 - AluSx SINE Alu -11 301 1 975 114 0 0 chr2 39119097 39119263 -211568591 + (TC)n Simple_repeat Simple_repeat 1 166 0 514 306 155 57 chr2 39119562 39120156 -211567698 - L3 LINE CR1 -174 1403 752 1899 132 11 7 chr2 39120568 39120876 -211566978 - AluJb SINE Alu 0 309 1 655 286 39 20 chr2 39121522 39121777 -211566077 + MIR SINE MIR 2 261 -1 561 286 40 52 chr2 39121985 39122237 -211565617 + MIR SINE MIR 13 261 -1 803 84 0 0 chr2 39123395 39123502 -211564352 - FLAM_A SINE Alu -3 139 33 450 330 24 15 chr2 39123704 39123910 -211563944 - MIR SINE MIR -29 233 26 1649 195 133 25 chr2 39124442 39124914 -211562940 - Charlie1b DNA MER1_type 0 523 1 2508 47 0 3 chr2 39124939 39125237 -211562617 + AluY SINE Alu 1 297 -14 363 23 0 0 chr2 39125247 39125291 -211562563 + (TG)n Simple_repeat Simple_repeat 1 44 0 481 305 38 30 chr2 39125807 39126043 -211561811 - MIR SINE MIR -2 260 23 613 267 37 0 chr2 39127404 39127565 -211560289 + MIR3 SINE MIR 30 196 -12 26 30 0 0 chr2 39127592 39127625 -211560229 + AT_rich Low_complexity Low_complexity 1 33 0 300 27 0 0 chr2 39129928 39129965 -211557889 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 257 0 0 29 chr2 39130382 39130416 -211557438 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 201 108 0 0 chr2 39130535 39130572 -211557282 + (T)n Simple_repeat Simple_repeat 1 37 0 341 354 133 19 chr2 39130823 39131235 -211556619 + L2 LINE L2 2855 3313 0 233 328 72 65 chr2 39131409 39131702 -211556152 - L2 LINE L2 -1812 1502 1208 717 260 82 27 chr2 39131775 39132141 -211555713 + L1ME4a LINE L1 5615 6000 -121 4696 164 30 3 chr2 39132231 39133095 -211554759 - L1PA13 LINE L1 -992 5154 4268 6390 102 11 0 chr2 39133095 39134110 -211553744 + L1PA13 LINE L1 5141 6163 0 420 295 31 106 chr2 39134428 39134500 -211553354 - MIR SINE MIR -6 256 180 2435 81 3 0 chr2 39134500 39134809 -211553045 + AluY SINE Alu 1 310 -1 420 295 31 106 chr2 39134809 39134963 -211552891 - MIR SINE MIR -82 180 47 1920 183 86 3 chr2 39135686 39136046 -211551808 + MLT1B LTR MaLR 1 390 0 693 247 172 62 chr2 39136050 39136423 -211551431 - LTR16A LTR ERVL -12 438 25 3326 145 48 43 chr2 39137527 39137735 -211550119 + LTR9 LTR ERV1 3 208 -404 2305 85 6 38 chr2 39137735 39137774 -211550080 - AluSg SINE Alu -1 309 270 180 77 0 0 chr2 39137774 39137800 -211550054 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2305 85 6 38 chr2 39137800 39138079 -211549775 - AluSg SINE Alu -40 270 1 3326 145 48 43 chr2 39138079 39138477 -211549377 + LTR9 LTR ERV1 208 612 0 226 168 215 28 chr2 39138994 39139101 -211548753 + L1ME4a LINE L1 5990 6116 -5 1782 170 133 3 chr2 39139164 39139488 -211548366 - MER47A DNA MER2_type 0 366 1 189 0 0 0 chr2 39141537 39141558 -211546296 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 8047 91 19 0 chr2 39141561 39143399 -211544455 - L1PA8 LINE L1 -14 6158 4293 464 339 24 6 chr2 39143735 39143903 -211543951 + MIR3 SINE MIR 31 201 -7 1532 155 40 65 chr2 39145193 39145515 -211542339 + L1MB2 LINE L1 5857 6170 -1 396 227 31 21 chr2 39147171 39147268 -211540586 + MIR3 SINE MIR 108 205 -3 655 287 203 20 chr2 39147561 39148004 -211539850 - MLT1L LTR MaLR -85 530 7 190 286 131 24 chr2 39148060 39148144 -211539710 - MIR SINE MIR -97 111 19 914 252 150 23 chr2 39148147 39148588 -211539266 + L1ME4a LINE L1 5584 6080 -41 2529 62 0 7 chr2 39149048 39149357 -211538497 + AluY SINE Alu 1 307 -4 2296 84 3 13 chr2 39149491 39149799 -211538055 + AluSq SINE Alu 9 313 0 351 0 0 0 chr2 39150573 39150612 -211537242 + (CA)n Simple_repeat Simple_repeat 1 39 0 379 289 45 51 chr2 39150666 39150822 -211537032 + L3 LINE CR1 998 1152 -425 359 250 86 35 chr2 39150819 39150935 -211536919 + L2 LINE L2 3151 3272 0 * 440 351 22 0 chr2 39150946 39151131 -211536723 + L3 LINE CR1 1170 1358 -219 186 274 105 48 chr2 39151265 39151389 -211536465 - L2 LINE L2 -4 3309 3179 654 159 143 0 chr2 39151925 39152051 -211535803 + L1MB7 LINE L1 6041 6184 0 270 286 129 36 chr2 39152343 39152483 -211535371 + MIR3 SINE MIR 13 165 -43 210 247 0 68 chr2 39152547 39152620 -211535234 - MIR SINE MIR -77 185 118 518 254 7 29 chr2 39153269 39153407 -211534447 + MIR3 SINE MIR 65 199 -9 288 223 172 21 chr2 39153656 39153768 -211534086 + MIR SINE MIR 1 125 -83 205 323 21 0 chr2 39154009 39154102 -211533752 + GA-rich Low_complexity Low_complexity 4 98 0 647 272 46 6 chr2 39154485 39154658 -211533196 + MIR SINE MIR 21 200 -62 2245 119 0 6 chr2 39154683 39154994 -211532860 - AluSx SINE Alu -3 309 1 351 271 220 11 chr2 39155476 39155653 -211532201 - MIR SINE MIR -32 230 17 2300 123 113 8 chr2 39156744 39157126 -211530728 + MSTA LTR MaLR 4 425 -3 9806 141 30 27 chr2 39157131 39158704 -211529150 + MSTA-int LTR MaLR 3 1580 0 1693 155 209 6 chr2 39158704 39159058 -211528796 + MSTA LTR MaLR 1 426 -2 1328 165 19 0 chr2 39160940 39161146 -211526708 - MER6B DNA MER2_type 0 210 1 485 234 66 7 chr2 39162105 39162242 -211525612 - MER58B DNA MER1_type 0 341 197 44577 39 4 9 chr2 39162760 39168945 -211518909 - L1PA4 LINE L1 0 6155 1 331 333 23 8 chr2 39171030 39171159 -211516695 + MIR SINE MIR 10 140 -122 651 323 68 53 chr2 39171666 39172484 -211515370 - HAL1b LINE L1 -514 834 4 1038 260 70 54 chr2 39173544 39174132 -211513722 - L1MEc LINE L1 -5017 1379 783 616 320 92 73 chr2 39174132 39174899 -211512955 + L2 LINE L2 1997 2805 -508 216 97 0 0 chr2 39174899 39174930 -211512924 + (CA)n Simple_repeat Simple_repeat 2 32 0 616 320 92 73 chr2 39174930 39175449 -211512405 + L2 LINE L2 2805 3313 0 234 0 0 0 chr2 39176420 39176446 -211511408 + (T)n Simple_repeat Simple_repeat 1 26 0 601 279 249 13 chr2 39177370 39177764 -211510090 + L2 LINE L2 2811 3297 -16 769 132 0 0 chr2 39177767 39177873 -211509981 + U6 snRNA snRNA 1 106 -1 4555 159 4 12 chr2 39177874 39178624 -211509230 + L1PA16 LINE L1 5414 6157 -9 231 148 19 56 chr2 39178675 39178729 -211509125 + GA-rich Low_complexity Low_complexity 4 55 0 1050 144 19 30 chr2 39180153 39180393 -211507461 + LTR54 LTR ERV1 192 488 -22 4661 140 35 0 chr2 39180393 39180876 -211506978 - L1MA4A LINE L1 -12 6291 5773 315 0 0 0 chr2 39180876 39180911 -211506943 + (TG)n Simple_repeat Simple_repeat 2 36 0 4661 140 35 0 chr2 39180911 39181141 -211506713 - L1MA4A LINE L1 -530 5773 5553 4259 148 51 14 chr2 39181141 39181940 -211505914 + L1 LINE L1 4275 5103 -1043 367 111 0 32 chr2 39181940 39182003 -211505851 + LTR54 LTR ERV1 450 510 0 1755 251 101 10 chr2 39182099 39182617 -211505237 - MLT1G LTR MaLR -61 529 2 1898 270 200 32 chr2 39182926 39182956 -211504898 - L2 LINE L2 -3 3310 3286 3158 223 40 8 chr2 39182956 39183589 -211504265 - MER82 DNA MER2_type 0 653 1 1898 270 200 32 chr2 39183589 39184751 -211503103 - L2 LINE L2 -27 3286 1937 870 249 0 0 chr2 39184751 39184916 -211502938 + MER63A DNA MER1_type 41 205 -5 238 233 17 75 chr2 39186199 39186319 -211501535 - MIR SINE MIR -137 125 13 1821 191 39 56 chr2 39186349 39186815 -211501039 + MLT1C LTR MaLR 9 466 -1 3400 138 31 36 chr2 39187834 39188448 -211499406 + LTR36 LTR ERV1 1 611 0 2199 106 3 0 chr2 39192318 39192621 -211495233 + AluSg1 SINE Alu 1 304 -5 200 323 0 0 chr2 39192751 39192816 -211495038 + MIR3 SINE MIR 138 202 -6 560 100 0 0 chr2 39194029 39194109 -211493745 - MADE1 DNA Mariner 0 80 1 2459 140 3 3 chr2 39194473 39194837 -211493017 + THE1B LTR MaLR 1 364 0 312 91 0 0 chr2 39194931 39194975 -211492879 + (TA)n Simple_repeat Simple_repeat 1 44 0 249 298 88 0 chr2 39195349 39195463 -211492391 + L2 LINE L2 2896 3019 -253 189 244 90 39 chr2 39195560 39195638 -211492216 + L2 LINE L2 3141 3222 -50 962 177 29 6 chr2 39195638 39195813 -211492041 + MER20 DNA MER1_type 20 198 -21 377 299 42 14 chr2 39196113 39196257 -211491597 - MIR3 SINE MIR -5 203 56 329 240 89 75 chr2 39196571 39196717 -211491137 - MER20B DNA MER1_type -620 163 16 336 280 154 14 chr2 39196842 39196985 -211490869 + MER5A DNA MER1_type 27 189 0 366 327 85 12 chr2 39196991 39197156 -211490698 - MER5B DNA MER1_type 0 178 2 650 195 104 0 chr2 39197235 39197389 -211490465 + MER5B DNA MER1_type 6 175 -3 2013 116 31 10 chr2 39198039 39198331 -211489523 + AluSg SINE Alu 1 298 -12 272 148 16 0 chr2 39199736 39199797 -211488057 + (TA)n Simple_repeat Simple_repeat 2 63 0 681 170 89 0 chr2 39199808 39199943 -211487911 - MLT2B2 LTR ERVL -41 474 328 364 218 59 0 chr2 39199959 39200060 -211487794 + MLT1K LTR MaLR 456 562 -26 257 327 58 44 chr2 39201251 39201417 -211486437 + MIR SINE MIR 23 187 -67 1826 157 3 10 chr2 39202709 39203002 -211484852 - AluJb SINE Alu -21 291 1 511 245 48 65 chr2 39203040 39203350 -211484504 + L1MC5 LINE L1 7609 7913 -48 1790 133 83 0 chr2 39203425 39203703 -211484151 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr2 39203768 39203796 -211484058 + AT_rich Low_complexity Low_complexity 1 28 0 3107 147 4 0 chr2 39204381 39204871 -211482983 + L1MA9 LINE L1 5818 6309 -3 507 253 149 0 chr2 39205843 39206017 -211481837 - MIR SINE MIR -55 207 8 187 406 30 10 chr2 39206179 39206381 -211481473 - L2 LINE L2 -884 2430 2225 596 203 42 0 chr2 39206649 39206767 -211481087 - FLAM_A SINE Alu -10 123 1 249 161 136 86 chr2 39207547 39207628 -211480226 - L2 LINE L2 -7 3306 3222 1041 219 148 26 chr2 39207856 39208235 -211479619 - L1ME3A LINE L1 -15 6155 5731 378 230 0 11 chr2 39208240 39208327 -211479527 + LTR67 LTR ERVL 472 557 0 2169 304 45 11 chr2 39209144 39210098 -211477756 + L2 LINE L2 1535 2520 -794 306 355 26 0 chr2 39210188 39210343 -211477511 - L1ME LINE L1 -270 5851 5693 404 242 17 42 chr2 39211291 39211411 -211476443 - L1ME LINE L1 -462 5659 5543 248 318 144 12 chr2 39213024 39213197 -211474657 + MIR SINE MIR 65 260 -2 1715 170 17 3 chr2 39213756 39214050 -211473804 - AluJo SINE Alu -14 298 1 2232 118 36 36 chr2 39214595 39214959 -211472895 - THE1B LTR MaLR 0 364 1 2406 78 10 10 chr2 39216848 39217156 -211470698 - AluY SINE Alu -3 308 1 22 0 0 0 chr2 39217679 39217701 -211470153 + AT_rich Low_complexity Low_complexity 1 22 0 224 259 54 108 chr2 39219403 39219569 -211468285 - MIR3 SINE MIR -11 197 41 788 285 143 32 chr2 39219609 39220044 -211467810 - MLT1K LTR MaLR -6 582 100 2530 72 0 0 chr2 39220166 39220472 -211467382 - AluY SINE Alu -5 306 1 742 190 0 29 chr2 39220645 39220782 -211467072 + FLAM_A SINE Alu 1 133 0 277 271 23 23 chr2 39221627 39221756 -211466098 + GA-rich Low_complexity Low_complexity 2 130 0 967 249 32 0 chr2 39221968 39222185 -211465669 - MER58A DNA MER1_type 0 224 1 1357 186 77 55 chr2 39222529 39222894 -211464960 - MLT1A2 LTR MaLR 0 374 2 3745 107 52 33 chr2 39224479 39225115 -211462739 - MER39B LTR ERV1 0 653 6 313 120 0 20 chr2 39225597 39225647 -211462207 + MLT1F LTR MaLR 494 542 0 2379 110 0 0 chr2 39225828 39226138 -211461716 + AluSx SINE Alu 1 310 -2 306 296 133 20 chr2 39226635 39226838 -211461016 - L1MC4 LINE L1 -1036 7006 6781 595 76 0 0 chr2 39227248 39227327 -211460527 - AluSp SINE Alu -9 304 226 1376 102 6 0 chr2 39227327 39227504 -211460350 - AluSp SINE Alu -126 187 10 453 266 18 0 chr2 39227556 39227665 -211460189 + MER81 DNA DNA 1 111 -3 447 256 23 93 chr2 39228256 39228428 -211459426 - MIR3 SINE MIR -14 194 35 278 336 115 0 chr2 39228797 39228919 -211458935 + L2 LINE L2 2927 3062 -251 495 217 99 50 chr2 39228958 39229119 -211458735 + MLT1C LTR MaLR 1 169 -298 203 316 31 67 chr2 39229179 39229372 -211458482 + L2 LINE L2 2868 3053 -219 279 0 0 0 chr2 39229429 39229460 -211458394 + (TG)n Simple_repeat Simple_repeat 2 32 0 246 192 0 0 chr2 39230043 39230095 -211457759 + (CA)n Simple_repeat Simple_repeat 2 53 0 231 239 56 14 chr2 39231330 39231401 -211456453 + MIR SINE MIR 63 136 -72 589 66 22 0 chr2 39231471 39231562 -211456292 + (TAGA)n Simple_repeat Simple_repeat 3 95 0 279 173 0 0 chr2 39232090 39232142 -211455712 + GA-rich Low_complexity Low_complexity 1 52 0 254 180 0 0 chr2 39234521 39234571 -211453283 - MLT1F LTR MaLR 0 542 493 1964 212 108 22 chr2 39234649 39235148 -211452706 - MLT1F LTR MaLR 0 542 1 3025 211 73 90 chr2 39235918 39236987 -211450867 + L1ME1 LINE L1 4492 5564 -602 2437 107 52 19 chr2 39236987 39237350 -211450504 + THE1C LTR MaLR 1 375 0 3025 211 73 90 chr2 39237350 39237683 -211450171 + L1ME1 LINE L1 5564 5901 -265 2085 215 30 21 chr2 39237688 39237869 -211449985 + L1ME3A LINE L1 5625 5803 -367 2408 145 0 23 chr2 39237869 39238214 -211449640 + MER1B DNA MER1_type 1 337 0 2085 215 30 21 chr2 39238214 39238567 -211449287 + L1ME3A LINE L1 5803 6164 -6 310 192 29 15 chr2 39238914 39239021 -211448833 + MIR SINE MIR 8 173 -89 456 283 136 74 chr2 39239660 39240176 -211447678 + L1ME4a LINE L1 5506 6053 -68 2245 60 4 0 chr2 39240201 39240467 -211447387 + L1PA7 LINE L1 5877 6143 -11 9034 203 138 30 chr2 39240496 39242884 -211444970 + L1MD1 LINE L1 3 2648 -3892 4367 178 8 27 chr2 39242889 39243535 -211444319 + L1MD1 LINE L1 5806 6434 -202 2208 86 62 0 chr2 39243535 39243825 -211444029 + AluSx SINE Alu 1 308 -4 4367 178 8 27 chr2 39243825 39244021 -211443833 + L1MD1 LINE L1 6434 6632 -4 3862 185 30 55 chr2 39245981 39246804 -211441050 - L1MB8 LINE L1 -1 6177 5375 561 349 11 38 chr2 39247477 39247738 -211440116 + MIR SINE MIR 9 262 0 306 333 53 57 chr2 39247769 39248033 -211439821 + L2 LINE L2 2918 3180 -92 267 245 157 113 chr2 39248122 39248326 -211439528 - MIR SINE MIR -8 254 42 690 129 29 0 chr2 39248415 39248554 -211439300 + CT-rich Low_complexity Low_complexity 3 145 0 553 204 35 14 chr2 39248560 39248702 -211439152 - MLT1A1 LTR MaLR -49 316 172 749 300 19 14 chr2 39249972 39250182 -211437672 - MLT1I LTR MaLR 0 409 199 4783 171 24 21 chr2 39250183 39250897 -211436957 + L1MB8 LINE L1 4963 5684 -494 2123 128 14 0 chr2 39250897 39251193 -211436661 + AluSx SINE Alu 6 305 -7 4783 171 24 21 chr2 39251193 39251690 -211436164 + L1MB8 LINE L1 5684 6178 0 2518 111 70 41 chr2 39252759 39252802 -211435052 - MSTA LTR MaLR -3 425 385 2322 94 3 0 chr2 39252802 39253100 -211434754 + AluSp SINE Alu 1 299 -14 2518 111 70 41 chr2 39253100 39253469 -211434385 - MSTA LTR MaLR -43 385 1 999 208 97 14 chr2 39253688 39253895 -211433959 - MER58A DNA MER1_type 0 224 1 3041 178 83 24 chr2 39253929 39254577 -211433277 - Tigger7 DNA MER2_type 0 2587 1 187 307 13 53 chr2 39254803 39254878 -211432976 + L2 LINE L2 3200 3271 -1 4308 217 80 30 chr2 39254893 39257183 -211430671 + L1MC2 LINE L1 3 2809 -4132 * 5960 225 28 74 chr2 39257161 39258401 -211429453 + L1MC2 LINE L1 3792 4902 -2039 204 67 0 0 chr2 39258401 39258431 -211429423 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5960 225 28 74 chr2 39258431 39259240 -211428614 + L1MC2 LINE L1 4902 5747 -1194 727 86 36 14 chr2 39259240 39259379 -211428475 + GA-rich Low_complexity Low_complexity 2 143 0 4790 166 40 52 chr2 39259381 39259829 -211428025 + L1MC2 LINE L1 6124 6576 -563 2114 100 18 0 chr2 39259829 39260129 -211427725 + AluSp SINE Alu 1 305 0 4790 166 40 52 chr2 39260129 39260708 -211427146 + L1MC2 LINE L1 6576 7139 0 199 229 115 16 chr2 39260767 39260828 -211427026 - MIR3 SINE MIR 0 208 142 190 383 64 0 chr2 39260817 39260911 -211426943 - L2 LINE L2 -2 3270 3171 * 257 106 0 21 chr2 39260967 39261014 -211426840 + (GA)n Simple_repeat Simple_repeat 1 46 0 248 154 19 0 chr2 39261645 39261697 -211426157 + CT-rich Low_complexity Low_complexity 4 56 0 380 229 31 42 chr2 39261801 39261897 -211425957 + L2 LINE L2 3178 3272 0 224 79 53 0 chr2 39262736 39262774 -211425080 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5321 110 29 6 chr2 39264879 39265817 -211422037 + L1PB2 LINE L1 5176 6167 -1 280 291 23 23 chr2 39265820 39265906 -211421948 - MIR SINE MIR -156 106 21 716 151 0 0 chr2 39266506 39266612 -211421242 - FLAM_C SINE Alu -36 107 2 901 302 78 25 chr2 39266616 39267403 -211420451 + L1ME3A LINE L1 4640 5496 -666 1848 155 0 34 chr2 39267409 39267630 -211420224 + AluJb SINE Alu 1 209 -103 2271 194 80 15 chr2 39267630 39268105 -211419749 + LTR22 LTR ERVK 1 506 -3 1848 155 0 34 chr2 39268105 39268205 -211419649 + AluJb SINE Alu 209 311 -1 604 246 81 104 chr2 39268206 39268649 -211419205 + L1ME3A LINE L1 5499 5931 -239 2065 123 0 0 chr2 39268948 39269280 -211418574 + AluSx SINE Alu 1 332 0 201 171 0 0 chr2 39269303 39269338 -211418516 + A-rich Low_complexity Low_complexity 1 35 0 332 268 120 14 chr2 39269413 39269555 -211418299 - MIR3 SINE MIR -12 196 40 206 319 29 0 chr2 39269625 39269694 -211418160 + L2 LINE L2 3187 3257 -15 628 201 69 83 chr2 39271994 39272198 -211415656 - MIR SINE MIR -13 249 49 247 350 57 14 chr2 39272423 39272563 -211415291 - L2 LINE L2 -222 3050 2905 627 222 56 44 chr2 39272617 39272797 -211415057 + MLT1J LTR MaLR 5 186 -325 263 278 67 0 chr2 39272913 39273003 -211414851 + MLT1J LTR MaLR 379 474 -37 1132 234 77 15 chr2 39274132 39274303 -211413551 - MER20B DNA MER1_type -430 353 194 2254 131 0 0 chr2 39274303 39274609 -211413245 + AluSx SINE Alu 1 306 -6 1132 234 77 15 chr2 39274609 39274762 -211413092 - MER20B DNA MER1_type -589 194 9 1412 208 134 11 chr2 39275498 39275863 -211411991 + MER66A LTR ERV1 29 438 -40 282 235 50 0 chr2 39276155 39276274 -211411580 + (TCTCTG)n Simple_repeat Simple_repeat 2 126 0 1046 288 28 6 chr2 39276552 39276875 -211410979 + LTR16A LTR ERVL 121 450 0 500 281 27 86 chr2 39276878 39277027 -211410827 + HERV16 LTR ERVL 4 133 -4863 1948 144 34 0 chr2 39277027 39277319 -211410535 - AluJo SINE Alu -10 302 1 500 281 27 86 chr2 39277319 39277425 -211410429 + HERV16 LTR ERVL 133 244 -4752 4345 282 58 30 chr2 39277712 39278628 -211409226 + HERV16 LTR ERVL 1607 2579 -2417 2082 198 100 32 chr2 39278628 39279098 -211408756 - MLT1D LTR MaLR 0 505 4 4345 282 58 30 chr2 39279098 39279625 -211408229 + HERV16 LTR ERVL 2579 3090 -1906 1175 183 14 0 chr2 39279812 39280025 -211407829 + AluJo SINE Alu 91 306 -6 3912 309 51 40 chr2 39280030 39281995 -211405859 + HERV16 LTR ERVL 3341 5326 -438 728 331 74 11 chr2 39282322 39282606 -211405248 + LTR16A LTR ERVL 143 444 -6 189 0 0 0 chr2 39282626 39282647 -211405207 + (A)n Simple_repeat Simple_repeat 1 21 0 1283 187 58 4 chr2 39283323 39283548 -211404306 + MER8 DNA MER2_type 2 238 -1 2352 98 0 9 chr2 39283584 39283899 -211403955 - AluSx SINE Alu 0 312 1 1243 195 71 62 chr2 39284538 39284973 -211402881 - LTR27 LTR ERV1 -2 634 208 813 185 11 34 chr2 39284955 39285133 -211402721 - LTR28 LTR ERV1 -842 178 5 * 1817 193 0 0 chr2 39285206 39285517 -211402337 - AluJb SINE Alu 0 312 2 1218 266 81 35 chr2 39285549 39285600 -211402254 - HAL1b LINE L1 -416 932 885 1214 203 32 9 chr2 39285600 39285817 -211402037 - MER58A DNA MER1_type -2 222 1 1218 266 81 35 chr2 39285817 39286221 -211401633 - HAL1b LINE L1 -463 885 446 2302 106 3 0 chr2 39286221 39286523 -211401331 - AluSx SINE Alu -9 303 1 1218 266 81 35 chr2 39286523 39286610 -211401244 - HAL1b LINE L1 -902 446 364 421 319 54 43 chr2 39286905 39287184 -211400670 - HAL1b LINE L1 -1008 340 59 1813 150 26 23 chr2 39287769 39287883 -211399971 - AluJb SINE Alu -4 308 196 2343 94 7 0 chr2 39287883 39288182 -211399672 + AluSx SINE Alu 2 302 -10 372 22 0 0 chr2 39288182 39288227 -211399627 + (GA)n Simple_repeat Simple_repeat 2 46 0 1813 150 26 23 chr2 39288227 39288418 -211399436 - AluJb SINE Alu -115 197 1 5367 119 41 14 chr2 39288426 39289295 -211398559 - L1MC1 LINE L1 0 6333 5438 2105 140 3 3 chr2 39289295 39289602 -211398252 - AluSq SINE Alu -6 307 1 5367 119 41 14 chr2 39289602 39289617 -211398237 - L1MC1 LINE L1 -895 5438 5425 2284 193 87 19 chr2 39289802 39289913 -211397941 + MER45B DNA AcHobo 466 568 -1013 1696 178 10 23 chr2 39289913 39290222 -211397632 - AluJo SINE Alu -7 305 1 2284 193 87 19 chr2 39290222 39290648 -211397206 + MER45B DNA AcHobo 568 1040 0 346 272 58 29 chr2 39290648 39290751 -211397103 - MIR3 SINE MIR -12 196 91 249 196 0 0 chr2 39291493 39291544 -211396310 + (CA)n Simple_repeat Simple_repeat 1 51 0 1038 134 2 3 chr2 39291755 39292259 -211395595 - ALR/Alpha Satellite centromeric 0 503 1 21 0 0 0 chr2 39292299 39292320 -211395534 + AT_rich Low_complexity Low_complexity 1 21 0 921 172 13 16 chr2 39292357 39292579 -211395275 - ALR/Alpha Satellite centromeric 0 221 1 982 192 1 4 chr2 39292774 39293797 -211394057 - ALR/Alpha Satellite centromeric 0 1020 1 925 131 11 26 chr2 39293812 39294133 -211393721 - ALR/Alpha Satellite centromeric -20 316 1 1005 173 3 16 chr2 39294238 39296949 -211390905 + ALR/Alpha Satellite centromeric 1 2674 -64 2045 128 45 0 chr2 39297469 39297759 -211390095 - AluSg SINE Alu -7 303 1 207 69 0 0 chr2 39297976 39298005 -211389849 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 39298028 39298049 -211389805 + AT_rich Low_complexity Low_complexity 1 21 0 533 139 14 111 chr2 39298063 39298207 -211389647 + L1ME LINE L1 5430 5559 -607 2972 16 0 0 chr2 39298209 39298577 -211389277 - L1PA3 LINE L1 -794 5352 4985 5978 56 3 5 chr2 39298577 39299345 -211388509 + L1PA3 LINE L1 5375 6142 -13 1016 168 1 3 chr2 39299350 39300610 -211387244 - ALR/Alpha Satellite centromeric -1 1258 1 2227 97 0 0 chr2 39350664 39350962 -211336892 - AluSq SINE Alu -15 298 1 2163 83 10 0 chr2 39350971 39351261 -211336593 - AluY SINE Alu -16 295 3 2370 72 3 0 chr2 39351277 39351581 -211336273 - AluSp SINE Alu -8 305 1 403 288 129 58 chr2 39351741 39351839 -211336015 + L1MC/D LINE L1 5255 5345 -2463 791 163 16 0 chr2 39351839 39351968 -211335886 + AluJ SINE Alu 2 132 -170 403 288 129 58 chr2 39351968 39352195 -211335659 + L1MC/D LINE L1 5345 5603 -2205 1925 123 27 3 chr2 39352197 39352490 -211335364 + AluSx SINE Alu 1 300 -12 905 100 0 0 chr2 39352597 39352717 -211335137 - AluSg SINE Alu -190 120 1 604 149 0 11 chr2 39352731 39352825 -211335029 + AluJ SINE Alu 132 224 -88 203 208 0 19 chr2 39352843 39352896 -211334958 + A-rich Low_complexity Low_complexity 2 53 0 2300 48 13 13 chr2 39353001 39353312 -211334542 + AluY SINE Alu 1 311 0 2074 88 61 0 chr2 39353316 39353610 -211334244 + AluSx SINE Alu 1 312 0 1774 118 22 4 chr2 39353626 39353926 -211333928 + AluSx SINE Alu 7 311 0 610 210 17 80 chr2 39353939 39354115 -211333739 + FRAM SINE Alu 1 165 -1 21 0 0 0 chr2 39354323 39354344 -211333510 + AT_rich Low_complexity Low_complexity 1 21 0 1448 207 27 3 chr2 39354357 39354656 -211333198 + AluJb SINE Alu 1 306 -6 2134 117 3 0 chr2 39354747 39355055 -211332799 + AluSx SINE Alu 1 309 -3 1535 158 135 7 chr2 39355348 39355652 -211332202 - MER2 DNA MER2_type -1 343 1 251 235 173 0 chr2 39355928 39356009 -211331845 - MIR SINE MIR -39 223 129 2141 81 3 3 chr2 39357040 39357323 -211330531 - AluSp SINE Alu -30 283 1 200 61 61 0 chr2 39358760 39358793 -211329061 + GA-rich Low_complexity Low_complexity 2 36 0 2356 59 0 16 chr2 39360231 39360536 -211327318 - AluY SINE Alu -11 300 1 2021 130 59 3 chr2 39361299 39361654 -211326200 + THE1C LTR MaLR 1 375 0 2376 59 0 0 chr2 39362097 39362401 -211325453 - AluY SINE Alu -7 304 1 708 168 0 0 chr2 39362706 39362819 -211325035 + AluJo/FLAM SINE Alu 2 114 -198 1967 128 7 0 chr2 39362819 39363115 -211324739 - AluSg SINE Alu -12 298 1 22 0 0 0 chr2 39363119 39363141 -211324713 + AT_rich Low_complexity Low_complexity 1 22 0 952 217 95 62 chr2 39363821 39364190 -211323664 - LTR16A1 LTR ERVL -1 456 76 670 201 143 0 chr2 39364329 39364483 -211323371 - MER69A DNA AcHobo -1 176 1 251 345 60 17 chr2 39364503 39364619 -211323235 - MIR SINE MIR -72 136 16 471 308 81 0 chr2 39365487 39365685 -211322169 - L3 LINE CR1 -51 1526 1313 2196 113 0 0 chr2 39365706 39366017 -211321837 + AluSq SINE Alu 1 311 -2 232 302 62 10 chr2 39366147 39366243 -211321611 + L2 LINE L2 3213 3313 0 331 266 150 91 chr2 39366247 39366438 -211321416 - L3 LINE CR1 -279 1298 1083 1964 114 10 7 chr2 39366438 39366736 -211321118 + AluSx SINE Alu 1 299 -13 331 266 150 91 chr2 39366736 39366830 -211321024 - L3 LINE CR1 -494 1083 996 434 343 89 28 chr2 39366902 39367115 -211320739 + MIR SINE MIR 25 250 -12 2132 56 74 0 chr2 39368343 39368627 -211319227 - AluY SINE Alu -6 305 1 1851 113 29 7 chr2 39369029 39369332 -211318522 + AluSg SINE Alu 1 309 0 2178 125 0 0 chr2 39369478 39369790 -211318064 - AluSq SINE Alu -1 312 1 505 281 138 0 chr2 39369969 39370136 -211317718 - MIR SINE MIR 0 262 73 3603 131 23 84 chr2 39370253 39370913 -211316941 - LTR8 LTR ERV1 -1 690 78 2190 103 7 0 chr2 39370913 39371215 -211316639 + AluSp SINE Alu 1 304 -9 3603 131 23 84 chr2 39371215 39371289 -211316565 - LTR8 LTR ERV1 -613 78 1 258 275 193 37 chr2 39371338 39371447 -211316407 + L2 LINE L2 3186 3311 -2 810 205 19 0 chr2 39371459 39371615 -211316239 + FRAM SINE Alu 1 159 -17 4886 40 2 0 chr2 39371615 39372226 -211315628 + L1PA5 LINE L1 5565 6176 0 2032 108 3 3 chr2 39372619 39372906 -211314948 + AluSx SINE Alu 21 307 -5 227 330 17 62 chr2 39373883 39374015 -211313839 + L3b LINE CR1 1250 1374 -209 2092 122 0 10 chr2 39374015 39374319 -211313535 + AluSx SINE Alu 1 301 -11 227 330 17 62 chr2 39374319 39374362 -211313492 + L3b LINE CR1 1374 1417 -166 2300 90 0 0 chr2 39374564 39374864 -211312990 + AluSg SINE Alu 1 300 -10 332 211 256 0 chr2 39375467 39375582 -211312272 + MIR3 SINE MIR 39 183 -25 180 0 0 0 chr2 39376123 39376143 -211311711 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 793 93 0 0 chr2 39376161 39376269 -211311585 + AluSp/q SINE Alu 199 306 -7 534 232 7 56 chr2 39376420 39376562 -211311292 - MER69A DNA AcHobo -42 135 1 2318 111 99 0 chr2 39376729 39377059 -211310795 + MER1A DNA MER1_type 1 363 -166 1412 73 9 2 chr2 39377059 39377291 -211310563 - MER4E LTR ERV1 0 766 483 695 139 10 0 chr2 39377291 39377392 -211310462 - AluSq/x SINE Alu -206 107 6 1340 161 44 32 chr2 39377393 39377641 -211310213 + MER4E LTR ERV1 218 468 -311 1046 86 0 7 chr2 39377649 39377789 -211310065 - AluSx SINE Alu -134 178 40 390 219 88 106 chr2 39377793 39377953 -211309901 + L2 LINE L2 2927 3083 -230 2282 82 0 0 chr2 39377973 39378267 -211309587 - AluSg SINE Alu -16 294 1 1938 128 7 3 chr2 39378278 39378576 -211309278 - AluSq SINE Alu -14 299 1 6680 61 4 48 chr2 39378587 39380320 -211307534 - SVA Other Other -683 1383 1 460 82 47 0 chr2 39380321 39380406 -211307448 + GA-rich Low_complexity Low_complexity 3 91 0 322 210 6 182 chr2 39380507 39380683 -211307171 - MIR SINE MIR -56 206 62 2128 112 3 0 chr2 39381280 39381575 -211306279 - AluSx SINE Alu -16 296 1 2329 247 76 14 chr2 39381640 39382337 -211305517 - L1ME3A LINE L1 -6 6164 5425 1806 170 0 0 chr2 39382361 39382655 -211305199 - AluSx SINE Alu -16 296 3 316 355 14 14 chr2 39382788 39382926 -211304928 + L2 LINE L2 3127 3264 -8 2038 135 7 0 chr2 39383021 39383325 -211304529 - AluSx SINE Alu -6 306 1 1341 132 12 33 chr2 39383444 39383687 -211304167 - AluJo SINE Alu -3 309 72 1737 156 27 0 chr2 39384238 39384533 -211303321 + AluSx SINE Alu 1 303 -9 4093 129 118 35 chr2 39384569 39385850 -211302004 - pTR5 LTR ERV1 0 2438 743 1928 112 0 0 chr2 39385850 39386119 -211301735 + AluSx SINE Alu 31 299 -13 2206 93 10 3 chr2 39386119 39386419 -211301435 + AluSg SINE Alu 1 302 -8 1924 134 0 23 chr2 39386964 39387129 -211300725 - AluSx SINE Alu -13 299 143 1966 138 0 3 chr2 39387129 39387427 -211300427 - AluSx SINE Alu -15 297 1 1924 134 0 23 chr2 39387427 39387567 -211300287 - AluSx SINE Alu -169 143 1 2375 120 11 0 chr2 39387582 39387940 -211299914 - L1PA15 LINE L1 0 6165 5804 3351 135 24 5 chr2 39387940 39388670 -211299184 - L1PA15 LINE L1 -677 5488 4752 549 269 98 21 chr2 39388732 39388925 -211298929 - MER102b DNA MER1_type 0 341 134 955 205 5 5 chr2 39388926 39389121 -211298733 - AluJb SINE Alu -9 303 109 25 0 0 0 chr2 39389166 39389191 -211298663 + AT_rich Low_complexity Low_complexity 1 25 0 1509 251 54 54 chr2 39389748 39390284 -211297570 + MLT1L LTR MaLR 3 541 -74 2184 74 7 32 chr2 39390284 39390593 -211297261 - AluSg SINE Alu -9 301 1 1509 251 54 54 chr2 39390593 39390665 -211297189 + MLT1L LTR MaLR 540 611 -4 2340 76 0 0 chr2 39390710 39391013 -211296841 + AluY SINE Alu 1 303 -8 1451 162 19 52 chr2 39391297 39391606 -211296248 - AluJo SINE Alu -4 308 10 183 284 64 64 chr2 39392623 39392732 -211295122 - L3 LINE CR1 -856 721 613 397 287 4 8 chr2 39394075 39394258 -211293596 - MER41B LTR ERV1 -208 427 112 2350 76 0 3 chr2 39394320 39394624 -211293230 - AluSg SINE Alu -7 303 1 478 321 38 27 chr2 39395152 39395336 -211292518 + MIR SINE MIR 2 187 -75 2646 3 0 0 chr2 39395337 39395627 -211292227 + AluYa5 SINE Alu 12 301 -10 1239 111 0 0 chr2 39395630 39395801 -211292053 + AluSp SINE Alu 137 307 -6 190 250 23 0 chr2 39395824 39395868 -211291986 + MIR SINE MIR 218 262 0 768 162 6 11 chr2 39396492 39396671 -211291183 + CT-rich Low_complexity Low_complexity 3 180 0 327 25 0 0 chr2 39396841 39396881 -211290973 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1685 165 0 11 chr2 39396881 39397281 -211290573 - AluJb SINE Alu 0 399 3 891 224 74 83 chr2 39397282 39397448 -211290406 + MER69 DNA AcHobo 2112 2278 -248 2097 121 0 13 chr2 39397448 39397761 -211290093 + AluSx SINE Alu 1 309 -3 891 224 74 83 chr2 39397761 39397930 -211289924 + MER69 DNA AcHobo 2278 2445 -81 1622 151 28 11 chr2 39397930 39398214 -211289640 - AluJb SINE Alu -10 302 14 891 224 74 83 chr2 39398214 39398296 -211289558 + MER69 DNA AcHobo 2445 2526 0 2270 86 3 6 chr2 39399418 39399732 -211288122 - AluSp SINE Alu 0 313 1 717 85 0 11 chr2 39400180 39400274 -211287580 + AluSg/x SINE Alu 85 177 -135 198 0 0 0 chr2 39400278 39400300 -211287554 + (A)n Simple_repeat Simple_repeat 1 22 0 377 297 31 92 chr2 39400302 39400497 -211287357 + MIR SINE MIR 22 204 -58 403 303 162 11 chr2 39400570 39400755 -211287099 - MIR SINE MIR -1 261 49 1914 114 22 41 chr2 39401087 39401402 -211286452 - AluSg SINE Alu 0 310 2 1561 154 31 0 chr2 39402302 39402561 -211285293 - AluJo SINE Alu -45 267 1 327 216 21 82 chr2 39402767 39402864 -211284990 - MER66B LTR ERV1 -104 382 292 2093 115 3 0 chr2 39402867 39403163 -211284691 - AluSx SINE Alu -15 297 1 22 0 0 0 chr2 39403163 39403185 -211284669 + AT_rich Low_complexity Low_complexity 1 22 0 225 290 0 0 chr2 39403267 39403329 -211284525 + A-rich Low_complexity Low_complexity 1 62 0 288 172 0 0 chr2 39403687 39403745 -211284109 + CT-rich Low_complexity Low_complexity 1 58 0 1611 66 5 0 chr2 39404043 39404254 -211283600 + AluSg1 SINE Alu 1 212 -97 208 229 9 67 chr2 39405099 39405204 -211282650 + G-rich Low_complexity Low_complexity 3 101 0 1121 107 0 0 chr2 39405894 39406053 -211281801 + AluSg/x SINE Alu 145 303 -9 492 103 216 10 chr2 39406055 39406152 -211281702 - L1MD3 LINE L1 -146 7849 7733 247 232 12 61 chr2 39407003 39407085 -211280769 + MER96 DNA MER1_type? 82 159 -16 2030 102 4 0 chr2 39407423 39407698 -211280156 + AluSx SINE Alu 1 276 -36 453 221 0 0 chr2 39407801 39407887 -211279967 + L1MD3 LINE L1 7888 7973 -22 1855 117 0 0 chr2 39407887 39408144 -211279710 + AluSx SINE Alu 1 257 -55 378 0 0 0 chr2 39408201 39408243 -211279611 + (TG)n Simple_repeat Simple_repeat 2 43 0 2096 111 3 3 chr2 39408771 39409077 -211278777 + AluSq SINE Alu 1 306 -7 842 128 0 30 chr2 39409084 39409217 -211278637 + FLAM_C SINE Alu 5 133 0 272 226 140 0 chr2 39409302 39409395 -211278459 - MER5A DNA MER1_type -77 112 7 826 143 0 30 chr2 39409758 39409891 -211277963 - FLAM_A SINE Alu -4 129 1 339 290 92 46 chr2 39410782 39410913 -211276941 - MIR3 SINE MIR -62 146 10 2063 137 0 0 chr2 39411036 39411342 -211276512 - AluSx SINE Alu -6 306 1 2148 120 0 16 chr2 39411345 39411662 -211276192 - AluSx SINE Alu 0 312 1 311 279 38 0 chr2 39411822 39411901 -211275953 - L2 LINE L2 -5 3267 3186 1632 158 24 17 chr2 39412185 39412483 -211275371 + AluJb SINE Alu 1 300 -12 238 227 45 15 chr2 39412794 39412860 -211274994 + MARNA DNA Mariner 243 310 -276 1617 136 173 60 chr2 39412885 39413267 -211274587 + MSTA LTR MaLR 4 428 0 1235 198 105 100 chr2 39413482 39413523 -211274331 - MLT2B1 LTR ERVL 0 520 481 246 32 0 0 chr2 39413523 39413554 -211274300 + (TG)n Simple_repeat Simple_repeat 2 32 0 1235 198 105 100 chr2 39413554 39413899 -211273955 - MLT2B1 LTR ERVL -39 481 129 2530 99 117 5 chr2 39413899 39414284 -211273570 - MSTA LTR MaLR 0 428 1 1235 198 105 100 chr2 39414284 39414325 -211273529 - MLT2B1 LTR ERVL -391 129 90 209 239 42 14 chr2 39415185 39415256 -211272598 + T-rich Low_complexity Low_complexity 2 74 0 448 225 9 45 chr2 39415376 39415487 -211272367 - MER5B DNA MER1_type -65 113 7 238 250 132 26 chr2 39415725 39415801 -211272053 - L2 LINE L2 -62 3210 3127 262 237 79 13 chr2 39416054 39416130 -211271724 + MER91C DNA MER1_type 25 105 -35 1505 183 122 25 chr2 39416459 39416819 -211271035 + MSTD LTR MaLR 2 396 0 2314 92 0 0 chr2 39416967 39417272 -211270582 - AluSx SINE Alu -7 305 1 1976 110 7 10 chr2 39418990 39419281 -211268573 - AluSx SINE Alu -14 298 9 2235 107 0 0 chr2 39419498 39419834 -211268020 - AluSg SINE Alu 0 336 1 442 311 126 18 chr2 39420341 39420563 -211267291 + MIR SINE MIR 2 247 -15 392 322 102 75 chr2 39420705 39421242 -211266612 + L2 LINE L2 2693 3263 -9 2349 64 3 0 chr2 39422269 39422565 -211265289 + AluY SINE Alu 3 299 -12 314 325 169 54 chr2 39422770 39423065 -211264789 - L2 LINE L2 -1 3271 2943 379 194 0 0 chr2 39423746 39423808 -211264046 + MER5B DNA MER1_type 1 62 -116 1947 145 3 0 chr2 39423810 39424106 -211263748 + AluSx SINE Alu 1 297 -15 696 186 46 26 chr2 39424114 39424361 -211263493 + MER61A LTR ERV1 1 343 0 426 250 9 52 chr2 39424368 39424484 -211263370 + MER5B DNA MER1_type 63 173 -5 2856 87 0 16 chr2 39425583 39425964 -211261890 + THE1C LTR MaLR 1 375 0 482 279 54 7 chr2 39425964 39426111 -211261743 - MIR3 SINE MIR -34 174 21 263 179 0 36 chr2 39426118 39426174 -211261680 + MER5B DNA MER1_type 1 54 -124 410 357 97 35 chr2 39426477 39426941 -211260913 - L2 LINE L2 -222 3050 2563 2282 108 0 6 chr2 39426983 39427297 -211260557 - AluSx SINE Alu 0 312 1 1158 178 0 17 chr2 39427463 39427693 -211260161 - AluJo SINE Alu 0 312 87 292 265 29 49 chr2 39427696 39427798 -211260056 - AluSg/x SINE Alu -116 186 87 2247 108 0 9 chr2 39428166 39428481 -211259373 - AluSx SINE Alu 0 312 1 1479 132 0 9 chr2 39428649 39428877 -211258977 - AluJo SINE Alu 0 312 87 314 210 4 0 chr2 39428880 39428953 -211258901 - AluJ/monomer SINE Alu -251 51 2 254 330 79 88 chr2 39429006 39429336 -211258518 + L2 LINE L2 2946 3272 0 2170 110 3 0 chr2 39430912 39431222 -211256632 - AluSx SINE Alu -1 311 1 295 322 11 11 chr2 39431630 39431720 -211256134 - L2 LINE L2 -4 3268 3179 721 260 20 20 chr2 39432642 39432846 -211255008 + MIR SINE MIR 47 250 -12 2074 132 0 3 chr2 39432972 39433276 -211254578 - AluSx SINE Alu -9 303 1 253 250 182 45 chr2 39433289 39433421 -211254433 + L2 LINE L2 3164 3313 0 2095 125 0 3 chr2 39434354 39434666 -211253188 - AluSx SINE Alu -1 311 1 1586 158 3 107 chr2 39434681 39435017 -211252837 - AluJo SINE Alu -1 301 1 2128 108 10 3 chr2 39435121 39435428 -211252426 - AluSg SINE Alu 0 310 2 469 298 43 19 chr2 39435776 39435984 -211251870 + L2 LINE L2 3010 3222 -91 284 118 39 0 chr2 39435984 39436035 -211251819 + Alu SINE Alu 247 299 -3 412 204 65 11 chr2 39436039 39436132 -211251722 + L2 LINE L2 3213 3310 -3 892 281 38 32 chr2 39436528 39436869 -211250985 - LTR67 LTR ERVL -2 555 213 744 157 25 57 chr2 39436879 39437038 -211250816 - LTR47A LTR ERVL -4 448 295 310 239 123 65 chr2 39437327 39437482 -211250372 - LTR67 LTR ERVL -392 165 2 3388 156 13 24 chr2 39437554 39438170 -211249684 - L1MB8 LINE L1 0 6178 5570 273 258 52 31 chr2 39438199 39438296 -211249558 - MIR SINE MIR -116 146 48 2355 97 0 0 chr2 39438358 39438668 -211249186 - AluSx SINE Alu -2 310 1 793 226 58 24 chr2 39438942 39439150 -211248704 + MLT1L LTR MaLR 135 349 -266 1823 140 46 35 chr2 39439345 39439716 -211248138 - THE1C LTR MaLR 0 375 1 375 225 25 0 chr2 39439909 39439988 -211247866 + L1MB5 LINE L1 6064 6144 -30 2308 93 0 0 chr2 39439988 39440298 -211247556 + AluSx SINE Alu 1 310 -2 267 189 94 0 chr2 39441489 39441542 -211246312 + MIR SINE MIR 82 139 -69 662 232 156 24 chr2 39441710 39441921 -211245933 - MLT1I LTR MaLR -14 395 157 1795 154 0 0 chr2 39442062 39442342 -211245512 - AluSx SINE Alu -32 280 1 297 75 0 0 chr2 39442458 39442498 -211245356 + (TTA)n Simple_repeat Simple_repeat 2 41 0 648 178 0 23 chr2 39442502 39442631 -211245223 - FLAM_A SINE Alu -9 133 8 2060 122 0 0 chr2 39442718 39443034 -211244820 - AluSx SINE Alu 0 316 1 1476 167 72 0 chr2 39443036 39443299 -211244555 - AluJb SINE Alu -19 293 12 224 396 104 11 chr2 39443378 39443560 -211244294 + L2 LINE L2 2715 2913 -401 597 323 45 0 chr2 39443745 39443943 -211243911 - MIR SINE MIR -3 259 53 701 271 175 23 chr2 39443974 39444121 -211243733 + L1ME4a LINE L1 5290 5413 -708 1608 151 48 4 chr2 39444121 39444392 -211243462 + AluSx SINE Alu 1 283 -29 701 271 175 23 chr2 39444392 39444832 -211243022 + L1ME4a LINE L1 5413 5946 -175 344 153 0 5 chr2 39444950 39445008 -211242846 + AluSc SINE Alu 1 49 -252 1458 76 0 0 chr2 39445008 39445193 -211242661 + AluSc SINE Alu 125 309 0 206 0 0 65 chr2 39446093 39446124 -211241730 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2357 87 0 0 chr2 39446235 39446544 -211241310 - AluSx SINE Alu -3 309 1 363 300 0 0 chr2 39446756 39446836 -211241018 - L2 LINE L2 -1 3312 3233 1301 217 94 3 chr2 39446849 39447148 -211240706 + MER58B DNA MER1_type 1 326 -15 2180 126 0 0 chr2 39447240 39447549 -211240305 + AluSx SINE Alu 1 309 -3 2307 93 0 0 chr2 39449293 39449632 -211238222 - AluSg SINE Alu 0 310 1 311 291 97 0 chr2 39450016 39450119 -211237735 + L3 LINE CR1 1463 1575 -2 313 248 29 95 chr2 39450822 39451032 -211236822 - L1ME3A LINE L1 -8 6162 5967 690 312 55 3 chr2 39451107 39451399 -211236455 - L1ME3A LINE L1 -219 5951 5645 1780 144 7 16 chr2 39451569 39451874 -211235980 + AluSx SINE Alu 1 302 -10 526 70 28 0 chr2 39452065 39452136 -211235718 + Alu SINE Alu 221 293 -16 455 278 139 12 chr2 39453347 39453520 -211234334 - MIR3 SINE MIR -10 198 4 291 234 203 8 chr2 39453730 39453858 -211233996 - MER112 DNA MER1_type -41 219 67 423 339 0 30 chr2 39454153 39454321 -211233533 - MIR3 SINE MIR -5 203 41 1990 102 26 36 chr2 39454530 39454868 -211232986 - AluY SINE Alu 0 335 1 234 200 18 18 chr2 39454868 39454889 -211232965 + CT-rich Low_complexity Low_complexity 2 56 0 26 0 0 0 chr2 39454949 39454975 -211232879 + AT_rich Low_complexity Low_complexity 1 26 0 801 279 40 47 chr2 39455173 39455495 -211232359 - L2 LINE L2 -50 3263 2944 2166 115 0 3 chr2 39455594 39455907 -211231947 - AluSq SINE Alu -1 312 1 228 346 39 15 chr2 39456128 39456258 -211231596 - L2 LINE L2 -298 2974 2842 1807 152 45 0 chr2 39456280 39456570 -211231284 + AluSx SINE Alu 1 303 -9 228 378 52 41 chr2 39456757 39457027 -211230827 - L2 LINE L2 -580 2734 2462 781 190 6 13 chr2 39457437 39457595 -211230259 + L1MA10 LINE L1 6176 6332 -2 21 36 0 0 chr2 39457742 39457770 -211230084 + AT_rich Low_complexity Low_complexity 1 28 0 190 143 0 29 chr2 39457934 39457969 -211229885 + MIR SINE MIR 107 140 -68 830 119 40 0 chr2 39458905 39459031 -211228823 - FLAM_C SINE Alu -12 131 1 2102 117 0 0 chr2 39459266 39459565 -211228289 + AluSx SINE Alu 1 299 -13 234 224 17 35 chr2 39459571 39459629 -211228225 - L2 LINE L2 -16 3256 3200 281 286 71 43 chr2 39460795 39460935 -211226919 + MIR SINE MIR 73 216 -46 407 213 22 44 chr2 39461212 39461352 -211226502 + (TAGA)n Simple_repeat Simple_repeat 2 139 -41 3396 141 23 95 chr2 39461352 39461627 -211226227 + LTR8 LTR ERV1 1 294 -397 2138 117 0 3 chr2 39461627 39461934 -211225920 + AluSx SINE Alu 1 306 -6 3396 141 23 95 chr2 39461934 39462403 -211225451 + LTR8 LTR ERV1 294 691 0 407 213 22 44 chr2 39462403 39462445 -211225409 + (TAGA)n Simple_repeat Simple_repeat 139 180 0 257 232 0 18 chr2 39462453 39462509 -211225345 - MLT1L LTR MaLR -8 607 553 2316 81 10 3 chr2 39462510 39462819 -211225035 + AluY SINE Alu 1 311 0 473 0 0 17 chr2 39462832 39462890 -211224964 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 283 102 85 34 chr2 39462914 39463054 -211224800 + Alu SINE Alu 247 389 0 367 322 122 9 chr2 39463083 39463313 -211224541 - MLT1L LTR MaLR -110 505 250 439 285 106 17 chr2 39464174 39464487 -211223367 + MLT1K LTR MaLR 184 547 -41 2097 76 47 0 chr2 39464617 39464894 -211222960 + AluY SINE Alu 1 290 -21 242 266 0 0 chr2 39465790 39465854 -211222000 + (CTG)n Simple_repeat Simple_repeat 3 66 0 569 14 14 0 chr2 39465996 39466066 -211221788 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 979 90 0 0 chr2 39466426 39466560 -211221294 - AluSg/x SINE Alu 0 312 179 2205 87 13 0 chr2 39466978 39467278 -211220576 - AluY SINE Alu -7 304 1 2109 128 0 3 chr2 39467638 39467944 -211219910 - AluSx SINE Alu -7 305 1 276 254 164 16 chr2 39469032 39469154 -211218700 - L2 LINE L2 -9 3304 3165 245 246 49 107 chr2 39469258 39469380 -211218474 - L2 LINE L2 -341 2972 2858 2334 87 0 10 chr2 39469602 39469914 -211217940 + AluSg SINE Alu 2 310 0 201 344 135 16 chr2 39470198 39470509 -211217345 + L2 LINE L2 2133 2480 -834 1474 141 79 3 chr2 39470557 39470796 -211217058 - MLT1D LTR MaLR -5 500 258 524 62 0 0 chr2 39470796 39470860 -211216994 + MER39B LTR ERV1 1 64 -589 * 1251 203 54 104 chr2 39470853 39471316 -211216538 + LTR8A LTR ERV1 288 727 0 * 1624 80 8 76 chr2 39471316 39471577 -211216277 + MER39B LTR ERV1 411 653 0 1034 139 100 6 chr2 39471591 39471771 -211216083 - MLT1D LTR MaLR -308 197 1 238 242 48 0 chr2 39471866 39471928 -211215926 + GA-rich Low_complexity Low_complexity 4 68 0 349 279 121 85 chr2 39472129 39472401 -211215453 + L2 LINE L2 2985 3266 -6 186 43 0 0 chr2 39473039 39473062 -211214792 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 28 0 0 0 chr2 39473252 39473280 -211214574 + AT_rich Low_complexity Low_complexity 1 28 0 782 294 92 30 chr2 39473370 39473845 -211214009 - L1ME LINE L1 -389 5775 5265 1492 181 16 41 chr2 39474033 39474177 -211213677 + L1MC1 LINE L1 4964 5110 -1123 1715 159 20 10 chr2 39474177 39474479 -211213375 - AluJb SINE Alu -7 305 1 1492 181 16 41 chr2 39474479 39474882 -211212972 + L1MC1 LINE L1 5110 5486 -747 3010 130 106 20 chr2 39474882 39475422 -211212432 + LTR18B LTR ERVL 1 586 -28 5471 126 6 4 chr2 39475450 39476290 -211211564 + L1MC1 LINE L1 5482 6323 -10 2101 92 7 0 chr2 39476290 39476572 -211211282 + AluY SINE Alu 1 284 -27 289 214 10 51 chr2 39476659 39476757 -211211097 - Charlie7 DNA MER1_type 0 2612 2519 221 343 0 0 chr2 39477249 39477319 -211210535 - MIR3 SINE MIR -25 183 114 1627 145 21 25 chr2 39477449 39477762 -211210092 - AluJo SINE Alu 0 312 1 2078 106 7 3 chr2 39477969 39478270 -211209584 - AluSg SINE Alu -8 302 1 822 226 38 0 chr2 39478484 39478643 -211209211 + MER5A DNA MER1_type 7 171 -18 187 186 23 0 chr2 39478649 39478692 -211209162 + MER5A DNA MER1_type 1 44 -145 1015 200 0 11 chr2 39478834 39479019 -211208835 + AluJo SINE Alu 1 183 -129 1927 98 0 0 chr2 39479146 39479401 -211208453 + AluSx SINE Alu 7 261 -51 1896 134 6 32 chr2 39479465 39479778 -211208076 - AluSx SINE Alu -7 305 1 3443 121 27 38 chr2 39479778 39480446 -211207408 - L1MB2 LINE L1 -340 5831 5171 1689 169 0 7 chr2 39480631 39480927 -211206927 + AluJb SINE Alu 1 294 -18 2113 96 13 16 chr2 39480927 39481240 -211206614 + AluSx SINE Alu 1 312 0 1277 157 42 34 chr2 39481799 39482061 -211205793 + AluJo SINE Alu 44 307 -5 951 207 19 28 chr2 39482152 39482365 -211205489 - MIR SINE MIR -16 246 36 21 36 0 0 chr2 39483095 39483123 -211204731 + AT_rich Low_complexity Low_complexity 1 28 0 268 234 56 56 chr2 39483351 39483458 -211204396 - L1MC5 LINE L1 -426 7535 7429 276 273 112 75 chr2 39483499 39483777 -211204077 - L1MC4a LINE L1 -1456 6352 6065 1881 127 0 3 chr2 39483833 39484116 -211203738 - AluSg SINE Alu -18 292 11 2285 92 0 0 chr2 39484125 39484431 -211203423 - AluSx SINE Alu -6 306 1 2277 236 70 16 chr2 39484433 39485080 -211202774 - L1MC4a LINE L1 -1871 5937 5256 509 275 53 86 chr2 39485117 39485455 -211202399 - L1MC4a LINE L1 -898 5248 4922 231 114 0 0 chr2 39485492 39485527 -211202327 + (CA)n Simple_repeat Simple_repeat 2 36 0 244 270 45 0 chr2 39485527 39485616 -211202238 + L1ME4a LINE L1 5977 6069 -52 198 0 0 0 chr2 39487118 39487140 -211200714 + (T)n Simple_repeat Simple_repeat 1 22 0 220 314 58 25 chr2 39488325 39488446 -211199408 - MIR3 SINE MIR -43 165 41 1009 213 74 4 chr2 39488574 39488818 -211199036 - MIR SINE MIR -1 261 1 339 244 138 48 chr2 39488876 39489045 -211198809 - MIR SINE MIR -48 214 38 180 167 56 19 chr2 39489795 39489849 -211198005 - MIR SINE MIR -137 71 16 1793 123 26 23 chr2 39491002 39491311 -211196543 + AluSp SINE Alu 1 310 -3 6485 14 1 15 chr2 39491507 39492221 -211195633 + L1PA2 LINE L1 5451 6154 -1 23 20 6 0 chr2 39492234 39492296 -211195558 + AT_rich Low_complexity Low_complexity 1 30 0 213 39 0 0 chr2 39492303 39492329 -211195525 + (A)n Simple_repeat Simple_repeat 1 26 0 348 24 0 0 chr2 39493971 39494012 -211193842 + (CA)n Simple_repeat Simple_repeat 1 41 0 184 341 23 0 chr2 39494431 39494519 -211193335 + MIR SINE MIR 46 135 -127 607 200 25 0 chr2 39495183 39495303 -211192551 - FLAM_C SINE Alu -20 123 1 1132 307 19 17 chr2 39495332 39495743 -211192111 - LTR16B LTR ERVL 0 464 53 297 167 13 51 chr2 39495806 39495884 -211191970 - L1M4 LINE L1 -913 5233 5159 878 146 29 0 chr2 39495887 39496048 -211191806 - AluJ SINE Alu 0 305 141 2560 119 91 10 chr2 39496048 39496444 -211191410 + MSTA LTR MaLR 1 428 0 865 188 0 0 chr2 39496457 39496590 -211191264 - AluJ SINE Alu -169 133 1 680 298 125 38 chr2 39496591 39497149 -211190705 - L1M4 LINE L1 -981 5165 4657 2379 96 0 3 chr2 39497149 39497452 -211190402 + AluY SINE Alu 1 302 -9 680 298 125 38 chr2 39497452 39497512 -211190342 - L1M4 LINE L1 -1489 4657 4604 1873 155 3 22 chr2 39497512 39497828 -211190026 + AluJo SINE Alu 1 310 -2 680 298 125 38 chr2 39497828 39498017 -211189837 - L1M4 LINE L1 -1542 4604 4287 443 253 132 32 chr2 39498968 39499158 -211188696 + MIR SINE MIR 17 225 -37 389 260 0 30 chr2 39499330 39499430 -211188424 - MIR SINE MIR -58 204 108 723 204 0 72 chr2 39499581 39499748 -211188106 - FRAM SINE Alu -2 174 20 2380 91 0 3 chr2 39500214 39500523 -211187331 - AluY SINE Alu -3 308 1 983 127 0 8 chr2 39501282 39501416 -211186438 - FLAM_C SINE Alu 0 133 1 186 298 165 0 chr2 39501473 39501594 -211186260 - L2 LINE L2 -5 3308 3168 1523 176 37 48 chr2 39501636 39501931 -211185923 - AluJb SINE Alu -19 293 2 668 122 0 0 chr2 39502936 39503026 -211184828 - AluS SINE Alu -222 91 2 23 33 0 0 chr2 39503335 39503365 -211184489 + AT_rich Low_complexity Low_complexity 1 30 0 446 225 0 0 chr2 39503688 39503777 -211184077 + L1M4 LINE L1 4684 4772 -1374 1865 69 0 13 chr2 39503880 39504113 -211183741 - AluY SINE Alu -81 230 1 567 149 168 0 chr2 39504315 39504422 -211183432 + FLAM_C SINE Alu 1 125 -8 2168 108 0 14 chr2 39505478 39505637 -211182217 - AluSq SINE Alu -21 292 137 1810 121 48 35 chr2 39505637 39505926 -211181928 - AluSg SINE Alu -17 293 1 2168 108 0 14 chr2 39505926 39506062 -211181792 - AluSq SINE Alu -176 137 1 537 68 0 0 chr2 39506229 39506303 -211181551 + (TG)n Simple_repeat Simple_repeat 1 74 0 2477 68 0 0 chr2 39506376 39506672 -211181182 - AluY SINE Alu -15 296 1 2299 85 0 0 chr2 39507141 39507453 -211180401 - AluSg SINE Alu 0 312 1 304 332 63 21 chr2 39508187 39508377 -211179477 + MIR SINE MIR 1 198 -64 642 267 187 33 chr2 39508495 39508795 -211179059 + L2 LINE L2 2967 3312 -1 457 279 52 22 chr2 39508862 39508998 -211178856 + MER5A DNA MER1_type 50 189 0 248 260 128 77 chr2 39509462 39509658 -211178196 + MIR SINE MIR 2 207 -55 2461 69 0 3 chr2 39510059 39510363 -211177491 - AluY SINE Alu -8 303 1 239 227 34 92 chr2 39510466 39510585 -211177269 - L1MC/D LINE L1 -2053 5755 5644 1721 161 12 46 chr2 39510852 39511175 -211176679 + AluJb SINE Alu 1 312 0 2211 101 13 13 chr2 39511282 39511589 -211176265 - AluSq SINE Alu -6 307 1 2197 94 0 27 chr2 39511940 39512239 -211175615 - AluSx SINE Alu -13 299 9 2114 74 42 7 chr2 39512729 39513014 -211174840 - AluY SINE Alu -16 295 1 330 294 206 0 chr2 39513317 39513453 -211174401 + MER5A DNA MER1_type 26 189 0 184 306 0 0 chr2 39513522 39513571 -211174283 + MIR3 SINE MIR 125 173 -35 1658 64 10 5 chr2 39513762 39513966 -211173888 - AluSc SINE Alu -9 300 96 2311 109 0 0 chr2 39514084 39514387 -211173467 - AluSc SINE Alu -6 303 1 249 189 81 14 chr2 39514638 39514712 -211173142 + Charlie5 DNA MER1_type 36 114 -2498 1129 148 220 9 chr2 39514712 39514942 -211172912 + Charlie5 DNA MER1_type 2189 2369 -255 1769 93 118 38 chr2 39514942 39515231 -211172623 + AluJb SINE Alu 1 312 0 1129 148 220 9 chr2 39515231 39515337 -211172517 + Charlie5 DNA MER1_type 2369 2596 -28 1959 253 97 70 chr2 39515351 39515438 -211172416 - L1MEc LINE L1 -3522 2693 2610 2097 91 40 10 chr2 39515438 39515734 -211172120 + AluSx SINE Alu 1 305 -7 1959 253 97 70 chr2 39515734 39516019 -211171835 - L1MEc LINE L1 -3605 2610 2334 2150 101 38 0 chr2 39516019 39516307 -211171547 + AluSq SINE Alu 1 299 -14 1959 253 97 70 chr2 39516307 39516524 -211171330 - L1MEc LINE L1 -3881 2334 2124 2303 112 0 0 chr2 39516524 39516827 -211171027 - AluSp SINE Alu -10 303 1 1959 253 97 70 chr2 39516827 39517242 -211170612 - L1MEc LINE L1 -4091 2124 1722 2113 75 28 11 chr2 39517242 39517524 -211170330 - AluSc SINE Alu -22 287 1 1959 253 97 70 chr2 39517524 39518520 -211169334 - L1MEc LINE L1 -4493 1722 656 313 266 171 13 chr2 39518992 39519150 -211168704 - L1MEc LINE L1 -6157 239 57 2326 97 3 25 chr2 39519286 39519605 -211168249 - AluSx SINE Alu 0 312 1 2155 101 14 7 chr2 39519774 39520070 -211167784 + AluSq SINE Alu 1 298 -15 21 36 0 0 chr2 39520070 39520098 -211167756 + AT_rich Low_complexity Low_complexity 1 28 0 1834 174 21 37 chr2 39520774 39521154 -211166700 - L1MC1 LINE L1 -2 6331 5958 8136 29 0 0 chr2 39521881 39522916 -211164938 - L1PA3 LINE L1 0 6155 5120 2280 98 3 0 chr2 39523087 39523382 -211164472 - AluSp SINE Alu -17 296 1 2085 137 10 0 chr2 39523500 39523799 -211164055 + AluSx SINE Alu 1 302 -10 889 312 33 68 chr2 39523840 39524401 -211163453 - L2 LINE L2 -1 3312 2772 362 305 119 70 chr2 39524455 39524743 -211163111 - L2 LINE L2 -115 3157 2840 2343 140 9 12 chr2 39524743 39525079 -211162775 + MER1B DNA MER1_type 3 337 0 362 305 119 70 chr2 39525079 39525311 -211162543 - L2 LINE L2 -432 2840 2621 477 158 16 102 chr2 39525633 39525760 -211162094 - MIR SINE MIR -58 204 89 2232 98 24 0 chr2 39526937 39527232 -211160622 - AluSx SINE Alu -10 302 1 2513 122 40 8 chr2 39527512 39527865 -211159989 - THE1B LTR MaLR 0 364 1 1271 130 13 59 chr2 39528390 39528628 -211159226 - AluJb SINE Alu 0 312 86 184 234 94 62 chr2 39529132 39529196 -211158658 + L2 LINE L2 3028 3093 -220 1603 166 3 63 chr2 39529910 39530212 -211157642 - AluJb SINE Alu -28 284 1 287 167 0 154 chr2 39530473 39530551 -211157303 + MER117 DNA MER1_type 2 67 -130 1356 219 62 51 chr2 39531223 39531576 -211156278 - L1ME3 LINE L1 0 6162 5802 2190 132 0 0 chr2 39531576 39531887 -211155967 + AluSq SINE Alu 1 311 -2 1356 219 62 51 chr2 39531887 39531966 -211155888 - L1ME3 LINE L1 -360 5802 5725 2144 228 77 49 chr2 39532054 39532344 -211155510 - L1MC3 LINE L1 -50 7735 7455 2117 94 7 4 chr2 39532344 39532621 -211155233 - AluSq SINE Alu -22 291 14 2144 228 77 49 chr2 39532621 39533079 -211154775 - L1MC3 LINE L1 -330 7455 6966 2204 136 23 0 chr2 39533101 39533447 -211154407 - L1PA16 LINE L1 -9 6157 5804 1489 203 112 58 chr2 39533729 39534051 -211153803 - L1MC5 LINE L1 -27 7934 7631 2276 121 0 3 chr2 39534051 39534364 -211153490 - AluSx SINE Alu 0 312 1 1489 203 112 58 chr2 39534364 39534712 -211153142 - L1MC5 LINE L1 -330 7631 7228 300 318 185 33 chr2 39534712 39534923 -211152931 - MIR SINE MIR -10 252 10 1739 106 94 0 chr2 39535511 39535807 -211152047 - AluY SINE Alu 0 311 1 2334 228 53 30 chr2 39535816 39536510 -211151344 - L1ME3 LINE L1 -1 6161 5452 313 65 102 0 chr2 39536606 39536714 -211151140 + (TA)n Simple_repeat Simple_repeat 2 120 0 21 36 0 0 chr2 39536784 39536812 -211151042 + AT_rich Low_complexity Low_complexity 1 28 0 2262 72 14 0 chr2 39536845 39537147 -211150707 - AluSp SINE Alu 0 306 1 2159 130 0 0 chr2 39537237 39537538 -211150316 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr2 39538248 39538270 -211149584 + AT_rich Low_complexity Low_complexity 1 22 0 669 146 0 0 chr2 39538271 39538367 -211149487 - AluJo SINE Alu -23 289 194 653 202 0 0 chr2 39538376 39538485 -211149369 - AluJo SINE Alu -202 110 2 769 194 0 14 chr2 39538514 39538658 -211149196 - FLAM_A SINE Alu 0 142 1 2158 157 70 44 chr2 39538929 39539061 -211148793 - L1MB8 LINE L1 -3 6455 6328 1820 158 10 0 chr2 39539061 39539353 -211148501 + AluJo SINE Alu 1 295 -17 2158 157 70 44 chr2 39539353 39539496 -211148358 - L1MB8 LINE L1 -130 6328 5889 429 249 92 22 chr2 39539496 39539725 -211148129 - L1PA10 LINE L1 -266 5902 5658 4883 238 71 35 chr2 39539742 39539935 -211147919 - L1MB8 LINE L1 -1171 5255 5070 1972 112 23 33 chr2 39539935 39540106 -211147748 - AluSx SINE Alu -11 301 133 2306 104 0 10 chr2 39540106 39540414 -211147440 - AluSc SINE Alu -4 305 1 1972 112 23 33 chr2 39540414 39540546 -211147308 - AluSx SINE Alu -179 133 1 4883 238 71 35 chr2 39540546 39541414 -211146440 - L1MB8 LINE L1 -1356 5070 4235 2262 114 7 0 chr2 39541414 39541720 -211146134 - AluSx SINE Alu -4 308 1 4883 238 71 35 chr2 39541720 39542115 -211145739 - L1MB8 LINE L1 -2191 4235 3856 2255 104 16 3 chr2 39542115 39542422 -211145432 - AluSx SINE Alu -1 311 1 4883 238 71 35 chr2 39542422 39543620 -211144234 - L1MB8 LINE L1 -2570 3856 2424 2033 128 10 0 chr2 39543620 39543910 -211143944 - AluSx SINE Alu -19 293 1 4883 238 71 35 chr2 39543910 39544292 -211143562 - L1MB8 LINE L1 -4002 2424 2057 967 161 333 32 chr2 39544305 39544557 -211143297 - L1MCa LINE L1 -4492 2072 1897 2120 135 0 0 chr2 39544557 39544861 -211142993 - AluSx SINE Alu -8 304 1 967 161 333 32 chr2 39544861 39545050 -211142804 - L1MCa LINE L1 -4667 1897 1498 2566 238 50 69 chr2 39545050 39545480 -211142374 - L1MCa LINE L1 -4983 1062 625 545 196 161 0 chr2 39545480 39545592 -211142262 - FLAM_A SINE Alu -3 130 1 2566 238 50 69 chr2 39545592 39545805 -211142049 - L1MCa LINE L1 -5420 625 409 1023 86 0 0 chr2 39545805 39545957 -211141897 + (TG)n Simple_repeat Simple_repeat 2 153 0 2566 238 50 69 chr2 39545957 39546392 -211141462 - L1MCa LINE L1 -5636 409 4 1981 118 28 9 chr2 39546495 39546818 -211141036 - L1MB3 LINE L1 0 6183 5855 2298 75 3 7 chr2 39547280 39547572 -211140282 - AluSp SINE Alu -22 291 1 581 128 23 0 chr2 39547749 39547835 -211140019 + FRAM SINE Alu 58 145 -31 870 97 7 83 chr2 39548063 39548207 -211139647 + FLAM_C SINE Alu 1 133 0 493 193 123 9 chr2 39548451 39548565 -211139289 + L2 LINE L2 3185 3311 -2 879 176 7 14 chr2 39548686 39548834 -211139020 - FRAM SINE Alu -30 146 1 393 307 73 7 chr2 39549141 39549278 -211138576 - L2 LINE L2 -1 3312 3167 1555 148 0 0 chr2 39549637 39549866 -211137988 + AluJb SINE Alu 84 312 0 1766 94 16 101 chr2 39550373 39550704 -211137150 - AluSx SINE Alu 0 305 1 207 0 0 0 chr2 39550711 39550734 -211137120 + (TTTTTG)n Simple_repeat Simple_repeat 1 23 0 455 231 148 18 chr2 39551069 39551298 -211136556 - L1MC5 LINE L1 -44 7917 7659 2198 106 7 0 chr2 39551440 39551741 -211136113 - AluSq SINE Alu -10 303 1 192 40 0 0 chr2 39551926 39551951 -211135903 + (TC)n Simple_repeat Simple_repeat 2 26 0 1976 167 0 0 chr2 39551951 39552250 -211135604 - AluJb SINE Alu -13 299 1 2129 73 49 7 chr2 39553083 39553370 -211134484 - AluSq SINE Alu -13 300 2 808 174 65 13 chr2 39553392 39553547 -211134307 - FAM SINE Alu -13 172 10 209 269 27 121 chr2 39554794 39554943 -211132911 + MIR SINE MIR 86 220 -42 311 290 0 0 chr2 39555067 39555136 -211132718 - L2 LINE L2 0 3272 3204 2106 121 3 10 chr2 39556290 39556595 -211131259 - AluSq SINE Alu -7 306 4 905 202 5 30 chr2 39557664 39557867 -211129987 + MER20 DNA MER1_type 7 204 -15 1847 126 133 36 chr2 39558671 39558838 -211129016 - MSTA LTR MaLR 0 428 279 2269 77 13 7 chr2 39558838 39559138 -211128716 - AluSg SINE Alu -8 302 1 1847 126 133 36 chr2 39559138 39559360 -211128494 - MSTA LTR MaLR -149 279 1 1193 186 174 22 chr2 39559739 39560142 -211127712 - L1ME3A LINE L1 0 6170 5707 189 74 0 0 chr2 39560436 39560463 -211127391 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2437 67 37 0 chr2 39560640 39560937 -211126917 + AluSp SINE Alu 1 308 -5 22 0 0 0 chr2 39562782 39562804 -211125050 + AT_rich Low_complexity Low_complexity 1 22 0 6225 117 31 21 chr2 39562811 39564047 -211123807 - L1MA3 LINE L1 0 7724 6468 762 143 0 8 chr2 39564047 39564173 -211123681 - AluSg/x SINE Alu -9 301 177 243 133 0 0 chr2 39564173 39564218 -211123636 + Alu SINE Alu 257 301 0 1364 109 0 0 chr2 39564317 39564491 -211123363 - AluSq SINE Alu -139 174 1 902 143 12 0 chr2 39564492 39564660 -211123194 - L1MA3 LINE L1 -1092 6473 6304 7386 167 164 73 chr2 39564679 39564958 -211122896 - L1MA3 LINE L1 -2016 5549 5297 210 71 0 0 chr2 39564958 39564986 -211122868 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 7386 167 164 73 chr2 39564986 39565999 -211121855 - L1MA3 LINE L1 -2268 5297 4377 2054 112 0 62 chr2 39565999 39566320 -211121534 - AluSx SINE Alu -11 301 1 7386 167 164 73 chr2 39566320 39567500 -211120354 - L1MA3 LINE L1 -3188 4377 3305 1081 212 14 0 chr2 39567500 39567717 -211120137 - AluJo SINE Alu -92 220 1 7386 167 164 73 chr2 39567717 39568075 -211119779 - L1MA3 LINE L1 -4260 3305 2981 1953 136 49 0 chr2 39568075 39568362 -211119492 + AluJb SINE Alu 1 301 -11 7386 167 164 73 chr2 39568362 39569186 -211118668 - L1MA3 LINE L1 -4584 2981 2233 473 130 0 0 chr2 39569186 39569255 -211118599 - AluS SINE Alu -244 69 1 7386 167 164 73 chr2 39569255 39570258 -211117596 - L1MA3 LINE L1 -5332 2233 13 2255 107 3 0 chr2 39570297 39570595 -211117259 + AluSp SINE Alu 1 299 -14 978 198 0 6 chr2 39570750 39570917 -211116937 + FRAM SINE Alu 1 165 -11 21 0 0 0 chr2 39571144 39571165 -211116689 + AT_rich Low_complexity Low_complexity 1 21 0 47 0 0 0 chr2 39572351 39572398 -211115456 + AT_rich Low_complexity Low_complexity 1 47 0 231 287 0 20 chr2 39575327 39575428 -211112426 + T-rich Low_complexity Low_complexity 4 102 0 2207 103 0 0 chr2 39577000 39577300 -211110554 - AluY SINE Alu -11 300 1 1730 159 58 28 chr2 39578858 39579222 -211108632 + THE1C LTR MaLR 1 375 0 342 301 79 22 chr2 39579651 39579819 -211108035 + MIR SINE MIR 13 192 -63 2303 120 0 0 chr2 39580353 39580653 -211107201 - AluSx SINE Alu -12 300 1 337 247 135 23 chr2 39580887 39581054 -211106800 - MIR SINE MIR -61 147 2 512 195 150 0 chr2 39581363 39581476 -211106378 - FLAM_A SINE Alu -3 130 1 208 281 115 58 chr2 39581492 39581557 -211106297 - MER5A DNA MER1_type -25 164 104 1088 74 0 7 chr2 39581557 39581706 -211106148 - L1PA5 LINE L1 -3 6151 6004 208 281 115 58 chr2 39581706 39581779 -211106075 - MER5A DNA MER1_type -85 104 18 418 231 59 21 chr2 39582273 39582459 -211105395 - LTR37B LTR ERV1 0 468 276 338 171 298 25 chr2 39582505 39582663 -211105191 - Charlie1 DNA MER1_type 0 2761 2561 1654 137 127 67 chr2 39582688 39583104 -211104750 - L1MA9 LINE L1 -83 6229 5789 292 253 11 11 chr2 39583210 39583305 -211104549 - LTR37B LTR ERV1 -366 102 8 1556 156 75 19 chr2 39583594 39583915 -211103939 - MER2 DNA MER2_type -6 339 1 527 230 53 9 chr2 39583944 39584057 -211103797 - MER5B DNA MER1_type -59 119 2 1267 313 150 32 chr2 39584063 39584949 -211102905 + L2 LINE L2 218 1208 -2106 1720 123 84 46 chr2 39586281 39586648 -211101206 + MER4B LTR ERV1 1 381 -229 810 189 142 37 chr2 39586678 39586974 -211100880 - L1MC5 LINE L1 -48 7913 7587 189 107 0 0 chr2 39587427 39587455 -211100399 + (TAG)n Simple_repeat Simple_repeat 2 29 0 242 93 0 23 chr2 39587473 39587516 -211100338 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 1064 304 104 13 chr2 39587631 39588349 -211099505 - L2 LINE L2 0 3313 2528 239 286 0 0 chr2 39588437 39588500 -211099354 - MIR SINE MIR -67 141 79 2272 99 0 13 chr2 39588808 39589110 -211098744 - AluSx SINE Alu -14 298 1 1673 308 82 49 chr2 39589673 39590450 -211097404 - ERVL LTR ERVL -462 5302 4552 2254 99 0 7 chr2 39590450 39590753 -211097101 + AluSq SINE Alu 1 301 -12 1673 308 82 49 chr2 39590753 39590904 -211096950 - ERVL LTR ERVL -1212 4552 4407 2242 96 3 13 chr2 39590904 39591206 -211096648 - AluSx SINE Alu -13 299 1 1673 308 82 49 chr2 39591206 39591429 -211096425 - ERVL LTR ERVL -1357 4407 4112 728 188 78 0 chr2 39591863 39592017 -211095837 + FRAM SINE Alu 1 166 0 454 62 0 0 chr2 39591954 39592018 -211095836 + Alu SINE Alu 240 303 -9 15322 130 19 11 chr2 39592365 39592806 -211095048 + Tigger1 DNA MER2_type 1 437 -1981 6479 122 9 17 chr2 39592806 39593783 -211094071 - LTR5 LTR ERVK 0 969 1 15322 130 19 11 chr2 39593783 39594493 -211093361 + Tigger1 DNA MER2_type 437 1140 -1278 2076 104 20 17 chr2 39594493 39594790 -211093064 + AluSx SINE Alu 1 298 -14 15322 130 19 11 chr2 39594790 39596036 -211091818 + Tigger1 DNA MER2_type 1140 2418 0 442 295 49 0 chr2 39596564 39596686 -211091168 - L2 LINE L2 -2 3270 3143 2002 104 77 11 chr2 39597016 39597303 -211090551 - AluSx SINE Alu -6 306 1 306 0 0 0 chr2 39597565 39597599 -211090255 + (TG)n Simple_repeat Simple_repeat 2 35 0 279 0 0 0 chr2 39598289 39598320 -211089534 + (TG)n Simple_repeat Simple_repeat 1 31 0 201 39 0 0 chr2 39598319 39598345 -211089509 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 1969 93 3 96 chr2 39598636 39598795 -211089059 - AluSp SINE Alu -21 292 177 2442 74 0 0 chr2 39598795 39599091 -211088763 - AluY SINE Alu -14 297 2 1969 93 3 96 chr2 39599091 39599253 -211088601 - AluSp SINE Alu -136 177 1 1826 239 49 18 chr2 39599374 39599825 -211088029 + LTR40a LTR ERVL 2 466 -53 370 286 116 68 chr2 39599867 39600301 -211087553 + L1M4 LINE L1 3624 4036 -2110 2165 122 0 0 chr2 39600301 39600589 -211087265 - AluSx SINE Alu -20 292 5 370 286 116 68 chr2 39600589 39601483 -211086371 + L1M4 LINE L1 4036 5016 -1130 1854 132 68 7 chr2 39601483 39601763 -211086091 + AluSx SINE Alu 5 301 -11 419 286 49 35 chr2 39601933 39602182 -211085672 + MIR SINE MIR 3 256 -6 363 280 64 8 chr2 39603924 39604049 -211083805 - MIR3 SINE MIR -63 145 14 2198 129 46 0 chr2 39604830 39605178 -211082676 + THE1B LTR MaLR 1 364 0 2692 160 27 0 chr2 39605559 39606008 -211081846 + L1MD3 LINE L1 7534 7994 -1 513 291 71 71 chr2 39607535 39607918 -211079936 + MLT1K LTR MaLR 164 549 -39 2784 127 24 0 chr2 39607918 39608336 -211079518 + MSTA LTR MaLR 1 428 0 513 291 71 71 chr2 39608336 39608374 -211079480 + MLT1K LTR MaLR 548 585 -3 190 312 48 56 chr2 39609535 39609660 -211078194 - L2 LINE L2 -11 3302 3179 249 196 0 0 chr2 39610375 39610426 -211077428 + (TG)n Simple_repeat Simple_repeat 1 51 0 305 267 67 0 chr2 39611181 39611271 -211076583 + MIR3 SINE MIR 101 196 -12 2491 193 87 19 chr2 39611271 39611697 -211076157 - MER45B DNA AcHobo -541 1040 568 1687 178 10 23 chr2 39611697 39612006 -211075848 + AluJo SINE Alu 1 305 -7 2491 193 87 19 chr2 39612006 39612117 -211075737 - MER45B DNA AcHobo -1013 568 466 5531 118 41 14 chr2 39612302 39612317 -211075537 + L1MC1 LINE L1 5425 5438 -895 2104 140 3 3 chr2 39612317 39612624 -211075230 + AluSq SINE Alu 1 307 -6 5531 118 41 14 chr2 39612624 39613493 -211074361 + L1MC1 LINE L1 5438 6333 0 1809 150 26 23 chr2 39613501 39613692 -211074162 + AluJb SINE Alu 1 190 -122 372 22 0 0 chr2 39613692 39613737 -211074117 + (TC)n Simple_repeat Simple_repeat 2 46 0 2370 94 7 0 chr2 39613737 39614036 -211073818 - AluSx SINE Alu -10 302 2 1809 150 26 23 chr2 39614036 39614150 -211073704 + AluJb SINE Alu 189 308 -4 365 319 54 43 chr2 39614735 39615014 -211072840 + HAL1b LINE L1 59 340 -1008 1181 266 81 35 chr2 39615309 39615396 -211072458 + HAL1b LINE L1 364 446 -902 2323 106 3 0 chr2 39615396 39615698 -211072156 + AluSx SINE Alu 1 303 -9 1181 266 81 35 chr2 39615698 39616102 -211071752 + HAL1b LINE L1 446 885 -463 1135 203 32 9 chr2 39616102 39616319 -211071535 + MER58A DNA MER1_type 1 222 -2 1181 266 81 35 chr2 39616319 39616370 -211071484 + HAL1b LINE L1 885 932 -416 1834 193 0 0 chr2 39616402 39616713 -211071141 + AluJb SINE Alu 2 312 0 1267 192 54 63 chr2 39616786 39617381 -211070473 + LTR27 LTR ERV1 5 634 -2 2373 98 0 9 chr2 39618020 39618335 -211069519 + AluSx SINE Alu 1 312 0 1190 187 58 4 chr2 39618371 39618596 -211069258 - MER8 DNA MER2_type -1 238 2 189 0 0 0 chr2 39619272 39619293 -211068561 + (T)n Simple_repeat Simple_repeat 1 21 0 730 331 74 11 chr2 39619313 39619597 -211068257 - LTR16A LTR ERVL -6 444 143 3919 307 52 42 chr2 39619924 39621889 -211065965 - HERV16 LTR ERVL -438 5326 3341 1177 183 14 0 chr2 39621894 39622107 -211065747 - AluJo SINE Alu -6 306 91 4349 285 57 29 chr2 39622294 39622821 -211065033 - HERV16 LTR ERVL -1906 3090 2579 1932 200 100 32 chr2 39622821 39623291 -211064563 + MLT1D LTR MaLR 4 505 0 4349 285 57 29 chr2 39623291 39624207 -211063647 - HERV16 LTR ERVL -2417 2579 1607 505 281 27 86 chr2 39624494 39624600 -211063254 - HERV16 LTR ERVL -4752 244 133 1961 144 34 0 chr2 39624600 39624892 -211062962 + AluJo SINE Alu 1 302 -10 505 281 27 86 chr2 39624892 39625041 -211062813 - HERV16 LTR ERVL -4863 133 4 1052 288 28 6 chr2 39625044 39625367 -211062487 - LTR16A LTR ERVL 0 450 121 282 235 50 0 chr2 39625645 39625764 -211062090 + (CAGAGA)n Simple_repeat Simple_repeat 2 126 0 1427 208 134 11 chr2 39626056 39626421 -211061433 - MER66A LTR ERV1 -40 438 29 1126 234 77 15 chr2 39627157 39627310 -211060544 + MER20B DNA MER1_type 9 151 -632 2272 131 0 0 chr2 39627310 39627616 -211060238 - AluSx SINE Alu -6 306 1 1126 234 77 15 chr2 39627616 39627787 -211060067 + MER20B DNA MER1_type 151 353 -430 262 256 78 11 chr2 39628916 39629006 -211058848 - MLT1J LTR MaLR -37 474 379 633 222 56 44 chr2 39629122 39629302 -211058552 - MLT1J LTR MaLR -325 186 5 229 364 10 0 chr2 39629397 39629496 -211058358 + L2 LINE L2 2951 3050 -222 567 201 69 83 chr2 39629721 39629925 -211057929 + MIR SINE MIR 49 249 -13 184 319 29 0 chr2 39632224 39632293 -211055561 - L2 LINE L2 -15 3257 3187 290 275 120 14 chr2 39632363 39632505 -211055349 + MIR3 SINE MIR 40 196 -12 201 171 0 0 chr2 39632580 39632615 -211055239 + T-rich Low_complexity Low_complexity 1 35 0 2091 123 0 0 chr2 39632638 39632970 -211054884 - AluSx SINE Alu 0 332 1 574 246 81 104 chr2 39633269 39633712 -211054142 - L1ME3A LINE L1 -239 5931 5499 1873 156 0 28 chr2 39633713 39633811 -211054043 - AluJb SINE Alu -1 311 212 2135 182 67 36 chr2 39633811 39634288 -211053566 - LTR22B LTR ERVK 0 492 1 1873 156 0 28 chr2 39634288 39634509 -211053345 - AluJb SINE Alu -100 212 1 397 306 38 13 chr2 39634515 39634672 -211053182 - L1ME3A LINE L1 -668 5496 5336 935 304 36 20 chr2 39634739 39635243 -211052611 - L1ME3A LINE L1 -905 5241 4730 677 151 0 0 chr2 39635306 39635412 -211052442 + FLAM_C SINE Alu 2 107 -36 252 291 23 23 chr2 39636012 39636098 -211051756 + MIR SINE MIR 21 106 -156 5299 110 29 6 chr2 39636101 39637039 -211050815 - L1PB2 LINE L1 -1 6167 5176 204 294 102 61 chr2 39639868 39640113 -211047741 - L2 LINE L2 -188 3084 2830 282 218 195 23 chr2 39640515 39640653 -211047201 + MIR3 SINE MIR 37 192 -47 1860 163 0 14 chr2 39640687 39640975 -211046879 + AluSx SINE Alu 1 284 -28 2341 109 0 0 chr2 39641244 39641548 -211046306 - AluSx SINE Alu -8 304 1 1620 73 5 0 chr2 39643291 39643495 -211044359 + AluSg/x SINE Alu 101 305 -5 466 249 115 30 chr2 39643558 39643723 -211044131 + MIR SINE MIR 22 200 -62 302 276 35 0 chr2 39643725 39643841 -211044013 + (TA)n Simple_repeat Simple_repeat 2 121 0 2075 128 0 7 chr2 39643974 39644280 -211043574 - AluSg SINE Alu -6 304 1 294 95 0 0 chr2 39644280 39644322 -211043532 - AluSp/q SINE Alu -10 293 252 1801 42 0 5 chr2 39644324 39644538 -211043316 - AluY SINE Alu -98 213 1 300 71 0 0 chr2 39644538 39644580 -211043274 - AluSq SINE Alu -10 293 252 1664 83 0 9 chr2 39644582 39644798 -211043056 - AluSq SINE Alu -99 214 1 606 224 40 40 chr2 39644800 39645001 -211042853 - L1MC5 LINE L1 -32 7929 7729 2336 78 0 3 chr2 39645679 39645963 -211041891 - AluSc SINE Alu -26 283 1 924 145 0 7 chr2 39646660 39646805 -211041049 + AluJo SINE Alu 120 263 -49 25 0 0 0 chr2 39646805 39646830 -211041024 + AT_rich Low_complexity Low_complexity 1 25 0 191 106 77 19 chr2 39646872 39646976 -211040878 + (TA)n Simple_repeat Simple_repeat 2 111 0 251 304 24 40 chr2 39647147 39647272 -211040582 - L1MC/D LINE L1 -1921 5887 5765 278 224 26 13 chr2 39648225 39648301 -211039553 - MER69 DNA AcHobo 0 2526 2450 * 483 226 48 41 chr2 39648298 39648444 -211039410 - MER69 DNA AcHobo -2379 147 1 240 100 0 0 chr2 39648671 39648711 -211039143 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2348 109 0 0 chr2 39649147 39649459 -211038395 - AluSx SINE Alu 0 312 1 297 335 126 16 chr2 39649702 39649882 -211037972 - MIR SINE MIR -48 214 11 3127 123 9 11 chr2 39649882 39650347 -211037507 + MER4C LTR ERV1 2 465 0 2417 82 6 13 chr2 39650368 39650683 -211037171 - AluSp SINE Alu 0 313 1 533 228 6 100 chr2 39650841 39651021 -211036833 + MER5A DNA MER1_type 21 183 -6 425 264 66 0 chr2 39651032 39651138 -211036716 - MER94 DNA DNA -1 133 21 198 71 0 0 chr2 39651410 39651438 -211036416 + (TC)n Simple_repeat Simple_repeat 1 28 0 253 325 71 0 chr2 39651483 39651637 -211036217 - L1MC5 LINE L1 -536 7425 7261 * 260 293 75 55 chr2 39651609 39652011 -211035843 - L1MC4 LINE L1 -580 7462 7044 1569 125 129 8 chr2 39652011 39652290 -211035564 - AluSg1 SINE Alu 0 309 1 260 293 75 55 chr2 39652290 39652351 -211035503 - L1MC4 LINE L1 -998 7044 6986 270 0 0 0 chr2 39652585 39652615 -211035239 + (T)n Simple_repeat Simple_repeat 1 30 0 1153 112 0 62 chr2 39652808 39652987 -211034867 + AluSq SINE Alu 3 170 -143 291 106 21 0 chr2 39653087 39653134 -211034720 - Alu SINE Alu -255 48 1 663 100 60 0 chr2 39653134 39653234 -211034620 + L1MA2 LINE L1 6199 6304 0 27 0 0 0 chr2 39653308 39653335 -211034519 + AT_rich Low_complexity Low_complexity 1 27 0 1082 243 56 7 chr2 39653519 39653807 -211034047 + LTR16A LTR ERVL 18 319 -131 213 39 0 0 chr2 39653807 39653833 -211034021 + (TTCCC)n Simple_repeat Simple_repeat 2 27 0 202 222 44 0 chr2 39654245 39654290 -211033564 + MIR SINE MIR 108 154 -108 2618 183 9 59 chr2 39654722 39654920 -211032934 + L1MB4 LINE L1 5630 5836 -344 2105 107 0 74 chr2 39654920 39655256 -211032598 + AluSx SINE Alu 1 311 -1 2618 183 9 59 chr2 39655256 39655637 -211032217 + L1MB4 LINE L1 5836 6180 0 346 129 100 14 chr2 39655654 39655724 -211032130 + L1MB8 LINE L1 6103 6178 0 603 265 73 39 chr2 39656335 39656595 -211031259 - MER102a DNA MER1_type -1 329 61 1850 147 0 11 chr2 39656706 39656985 -211030869 + AluSx SINE Alu 1 276 -36 816 159 0 23 chr2 39656985 39657117 -211030737 + AluSg/x SINE Alu 176 304 -8 239 236 125 0 chr2 39657525 39657597 -211030257 + MIR SINE MIR 112 192 -70 1710 172 3 3 chr2 39657606 39657902 -211029952 + AluSx SINE Alu 1 296 -16 1061 61 0 8 chr2 39657913 39658045 -211029809 - THE1A LTR MaLR -224 131 1 333 200 46 0 chr2 39658045 39658107 -211029747 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 39658111 39658167 -211029687 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 39658569 39658738 -211029116 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 39658874 39659002 -211028852 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 39659154 39659463 -211028391 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 39659639 39659706 -211028148 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 39660568 39660730 -211027124 - AluSg/x SINE Alu -12 298 126 758 118 10 0 chr2 39661153 39661255 -211026599 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 39661398 39661977 -211025877 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 39662080 39662184 -211025670 - L2 LINE L2 -7 3265 3150 2134 120 3 16 chr2 39662734 39663051 -211024803 - AluSq SINE Alu 0 313 1 1116 194 28 5 chr2 39663088 39663299 -211024555 - MER20 DNA MER1_type 0 219 4 833 278 161 54 chr2 39665522 39665968 -211021886 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 39666290 39666314 -211021540 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 39666314 39666598 -211021256 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 39667243 39667594 -211020260 + MSTD LTR MaLR 1 396 0 1102 308 59 53 chr2 39667652 39668546 -211019308 + HAL1 LINE L1 12 911 -1596 420 313 170 34 chr2 39668675 39669116 -211018738 - MLT1J LTR MaLR -10 501 1 3079 119 2 5 chr2 39669353 39669783 -211018071 + L1PA15 LINE L1 5724 6152 -13 2434 51 0 3 chr2 39670015 39670307 -211017547 + AluY SINE Alu 1 291 -20 382 178 178 9 chr2 39670447 39670554 -211017300 + L2 LINE L2 3187 3311 -2 1074 82 7 0 chr2 39671341 39671476 -211016378 + AluY SINE Alu 1 136 -175 2101 114 10 7 chr2 39672105 39672402 -211015452 + AluSx SINE Alu 1 298 -14 246 294 200 0 chr2 39672802 39672887 -211014967 - L3b LINE CR1 -140 1443 1342 305 228 173 0 chr2 39672964 39673074 -211014780 + MIR SINE MIR 10 135 -73 2021 117 57 0 chr2 39673923 39674206 -211013648 - AluSx SINE Alu -13 299 1 1177 186 0 0 chr2 39674784 39674972 -211012882 + MER5A DNA MER1_type 2 189 0 2206 122 0 10 chr2 39675414 39675718 -211012136 + AluSx SINE Alu 1 301 -11 425 214 0 11 chr2 39675748 39675837 -211012017 + MLT1A1 LTR MaLR 1 88 -507 2096 210 71 40 chr2 39675895 39675928 -211011926 - L1ME LINE L1 -378 5788 5757 1558 169 28 31 chr2 39675928 39676218 -211011636 - AluJo SINE Alu -23 289 1 2096 210 71 40 chr2 39676218 39676486 -211011368 - L1ME LINE L1 -409 5757 5499 2017 130 19 19 chr2 39676486 39676793 -211011061 - AluSx SINE Alu -5 307 1 2096 210 71 40 chr2 39676793 39677497 -211010357 - L1ME LINE L1 -667 5499 4749 1366 158 59 4 chr2 39677500 39677753 -211010101 + MLT1A1 LTR MaLR 98 364 -1 1270 159 24 99 chr2 39677756 39678063 -211009791 - L1ME LINE L1 -1432 4714 4440 2090 136 0 13 chr2 39678063 39678379 -211009475 - AluSx SINE Alu 0 312 1 1270 159 24 99 chr2 39678379 39678454 -211009400 - L1ME LINE L1 -1706 4440 4361 1186 289 123 53 chr2 39678463 39679251 -211008603 - HAL1 LINE L1 -1447 1060 218 834 211 48 14 chr2 39679577 39679724 -211008130 - AluJ SINE Alu -19 293 142 333 233 27 27 chr2 39679724 39679797 -211008057 + FLAM_A SINE Alu 47 119 -14 782 177 15 0 chr2 39679797 39679927 -211007927 - AluJ SINE Alu -170 132 1 623 336 62 17 chr2 39680550 39680791 -211007063 + MIR SINE MIR 11 262 0 421 313 26 26 chr2 39680879 39681189 -211006665 + L1M4 LINE L1 4135 4444 -1702 1901 222 70 13 chr2 39681193 39681648 -211006206 - MLT1E2 LTR MaLR -133 493 13 405 329 190 5 chr2 39681663 39681879 -211005975 + MIR SINE MIR 7 262 0 475 219 189 30 chr2 39681889 39682090 -211005764 - L3 LINE CR1 -737 840 608 295 306 22 60 chr2 39682335 39682469 -211005385 - MIR SINE MIR -111 151 23 812 94 0 19 chr2 39683265 39683371 -211004483 - FLAM_C SINE Alu -18 125 22 1619 176 37 0 chr2 39683476 39683748 -211004106 - AluJb SINE Alu -30 282 1 1025 192 0 6 chr2 39683773 39683940 -211003914 + FAM SINE Alu 1 166 -9 411 260 52 38 chr2 39684209 39684372 -211003482 - MIR SINE MIR -63 145 2 1746 145 34 0 chr2 39684691 39684953 -211002901 - AluJo SINE Alu -23 289 19 426 226 175 7 chr2 39685746 39685883 -211001971 - MIR3 SINE MIR -47 161 2 745 166 94 2 chr2 39687179 39687387 -211000467 - L1MB5 LINE L1 0 6180 5958 226 227 61 30 chr2 39688148 39688214 -210999640 + MER5B DNA MER1_type 82 149 -29 671 93 90 0 chr2 39688879 39689007 -210998847 + L1MA8 LINE L1 6128 6284 -7 777 174 16 8 chr2 39689120 39689241 -210998613 + FLAM_C SINE Alu 6 127 -16 2494 59 7 7 chr2 39689330 39689634 -210998220 + AluY SINE Alu 5 308 -3 1219 187 109 50 chr2 39690065 39690662 -210997192 - MER20B DNA MER1_type -61 722 2 27 0 0 0 chr2 39692473 39692500 -210995354 + AT_rich Low_complexity Low_complexity 1 27 0 311 217 56 77 chr2 39692778 39692921 -210994933 + L1 LINE L1 4873 5012 -1134 1824 115 24 0 chr2 39693995 39694247 -210993607 + AluSx SINE Alu 55 312 0 298 269 128 0 chr2 39694283 39694361 -210993493 + L2 LINE L2 3187 3274 -39 1577 161 6 70 chr2 39695028 39695358 -210992496 + AluJo SINE Alu 1 309 -3 371 244 33 46 chr2 39695375 39695550 -210992304 - L1MC4 LINE L1 0 8042 7751 2166 99 3 3 chr2 39695705 39695997 -210991857 + AluSg SINE Alu 16 307 -3 469 296 57 71 chr2 39696063 39696305 -210991549 + L1MC4a LINE L1 5419 5663 -2145 945 119 0 15 chr2 39696305 39696439 -210991415 + FLAM_C SINE Alu 1 132 -1 469 296 57 71 chr2 39696439 39696692 -210991162 + L1MC4a LINE L1 5663 5907 -1901 2131 119 3 41 chr2 39696700 39697019 -210990835 - AluSx SINE Alu -5 307 1 562 233 72 28 chr2 39697213 39697393 -210990461 + MLT1F1 LTR MaLR 32 219 -323 1179 223 16 0 chr2 39697419 39697661 -210990193 + MLT1F1 LTR MaLR 322 567 0 26 0 0 0 chr2 39699361 39699387 -210988467 + AT_rich Low_complexity Low_complexity 1 26 0 292 304 71 9 chr2 39699729 39699841 -210988013 + MIR SINE MIR 33 151 -111 482 282 106 39 chr2 39699863 39700118 -210987736 - L2 LINE L2 0 3313 3042 444 171 0 0 chr2 39700293 39700363 -210987491 - MER44D DNA MER2_type 0 609 540 1709 161 13 26 chr2 39700364 39700669 -210987185 + AluJo SINE Alu 3 303 -9 1175 128 111 4 chr2 39700759 39700994 -210986860 - MER44D DNA MER2_type -79 530 1 234 0 0 0 chr2 39701816 39701842 -210986012 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 39705641 39705662 -210982192 + AT_rich Low_complexity Low_complexity 1 21 0 203 61 30 0 chr2 39706142 39706175 -210981679 + (CA)n Simple_repeat Simple_repeat 2 35 0 483 277 174 96 chr2 39708217 39708664 -210979190 - L3 LINE CR1 -23 1554 1073 267 264 286 14 chr2 39708754 39708894 -210978960 + MIR3 SINE MIR 16 193 -15 828 45 0 27 chr2 39708910 39709055 -210978799 + L1PA3 LINE L1 6040 6155 0 21 71 0 0 chr2 39709327 39709369 -210978485 + AT_rich Low_complexity Low_complexity 1 42 0 2220 94 13 3 chr2 39711915 39712213 -210975641 - AluSc SINE Alu -8 301 1 1555 123 186 4 chr2 39712241 39712494 -210975360 + AluSq SINE Alu 1 299 -14 26 36 0 36 chr2 39713644 39713674 -210974180 + AT_rich Low_complexity Low_complexity 1 30 -23 1693 187 10 3 chr2 39713674 39713963 -210973891 - AluJb SINE Alu -21 291 1 26 36 0 36 chr2 39713963 39713987 -210973867 + AT_rich Low_complexity Low_complexity 30 53 0 27 62 0 0 chr2 39714506 39714554 -210973300 + AT_rich Low_complexity Low_complexity 1 48 0 2271 68 0 0 chr2 39715629 39715909 -210971945 - AluY SINE Alu -16 295 16 260 262 48 0 chr2 39716876 39716960 -210970894 + MIR SINE MIR 175 262 0 1923 134 71 85 chr2 39717359 39717793 -210970061 + MSTA LTR MaLR 1 428 0 2282 100 7 3 chr2 39717871 39718171 -210969683 + AluSg SINE Alu 1 301 -9 500 193 0 12 chr2 39718365 39718448 -210969406 + FLAM_A SINE Alu 2 83 -59 1335 198 21 25 chr2 39720340 39720623 -210967231 + AluJo SINE Alu 16 297 -15 2340 97 0 0 chr2 39721297 39721596 -210966258 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr2 39721709 39721744 -210966110 + AT_rich Low_complexity Low_complexity 1 35 0 1558 129 98 4 chr2 39723221 39723485 -210964369 + AluSg1 SINE Alu 11 299 -10 2178 92 6 16 chr2 39723495 39723809 -210964045 + AluY SINE Alu 1 311 0 447 214 47 120 chr2 39723853 39724170 -210963684 + L1MC4 LINE L1 7688 7981 -61 24 67 0 0 chr2 39724181 39724226 -210963628 + AT_rich Low_complexity Low_complexity 1 45 0 1885 147 35 3 chr2 39724267 39724552 -210963302 + AluSx SINE Alu 1 294 -18 1885 136 19 16 chr2 39724595 39724903 -210962951 + AluSg SINE Alu 1 309 -1 29 0 0 0 chr2 39725081 39725110 -210962744 + AT_rich Low_complexity Low_complexity 1 29 0 2312 69 3 0 chr2 39725163 39725453 -210962401 + AluSx SINE Alu 1 291 -21 1816 152 21 3 chr2 39725868 39726158 -210961696 - AluSx SINE Alu -17 295 1 29 28 0 0 chr2 39726614 39726650 -210961204 + AT_rich Low_complexity Low_complexity 1 36 0 448 283 45 40 chr2 39726803 39726980 -210960874 - L3 LINE CR1 -291 1286 1109 2387 69 3 7 chr2 39727284 39727587 -210960267 - AluSg1 SINE Alu -7 302 1 458 212 22 120 chr2 39727917 39728101 -210959753 + MLT1K LTR MaLR 391 556 -32 192 273 182 0 chr2 39728188 39728254 -210959600 + L2 LINE L2 3230 3307 -6 250 271 82 14 chr2 39729958 39730039 -210957815 - MIR3 SINE MIR -47 161 75 1663 125 6 78 chr2 39730045 39730365 -210957489 + AluJb SINE Alu 1 297 -15 23 0 0 0 chr2 39730900 39730923 -210956931 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 39731483 39731510 -210956344 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 39731761 39731785 -210956069 + GC_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 39732053 39732090 -210955764 + GC_rich Low_complexity Low_complexity 1 37 0 238 343 86 0 chr2 39733556 39733661 -210954193 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 39734059 39734094 -210953760 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 39735491 39735570 -210952284 - L2 LINE L2 -44 3228 3139 490 245 30 114 chr2 39735645 39735798 -210952056 - MIR SINE MIR -31 231 103 1612 181 0 4 chr2 39735798 39736068 -210951786 + AluJb SINE Alu 41 309 -3 490 245 30 114 chr2 39736068 39736151 -210951703 - MIR SINE MIR -159 103 15 1817 167 0 25 chr2 39736249 39736567 -210951287 - AluJo SINE Alu -2 310 1 1964 150 33 0 chr2 39736714 39737014 -210950840 - AluSx SINE Alu -2 310 1 2502 51 0 0 chr2 39737718 39738014 -210949840 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 39738061 39738082 -210949772 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 39738124 39738162 -210949692 + AT_rich Low_complexity Low_complexity 1 38 0 2770 63 3 28 chr2 39738774 39739010 -210948844 - THE1A LTR MaLR 0 355 130 2085 154 3 0 chr2 39739010 39739321 -210948533 + AluSx SINE Alu 1 312 0 2770 63 3 28 chr2 39739321 39739448 -210948406 - THE1A LTR MaLR -225 130 1 280 210 48 0 chr2 39739448 39739510 -210948344 - Charlie5 DNA MER1_type -2542 70 6 242 214 18 18 chr2 39739514 39739570 -210948284 + L2 LINE L2 3176 3231 -41 1186 107 0 0 chr2 39739972 39740141 -210947713 + L1PA10 LINE L1 6000 6168 0 255 250 117 78 chr2 39740277 39740405 -210947449 - MIR SINE MIR -3 259 127 2195 136 0 0 chr2 39740557 39740866 -210946988 - AluSx SINE Alu -3 309 1 236 172 52 17 chr2 39741042 39741100 -210946754 - LTR67 LTR ERVL -2 555 496 931 130 86 19 chr2 39741971 39742133 -210945721 - AluSg/x SINE Alu -12 298 126 648 117 19 10 chr2 39742555 39742658 -210945196 - AluSp SINE Alu -209 104 1 3557 131 42 0 chr2 39742800 39743379 -210944475 + LTR26 LTR ERV1 1 603 0 219 269 135 19 chr2 39743482 39743586 -210944268 - L2 LINE L2 -7 3265 3150 2139 120 3 16 chr2 39744136 39744453 -210943401 - AluSq SINE Alu 0 313 1 1026 194 28 5 chr2 39744490 39744701 -210943153 - MER20B DNA MER1_type 0 219 4 833 278 161 54 chr2 39746923 39747369 -210940485 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 39747690 39747714 -210940140 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 39747714 39747998 -210939856 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 39748643 39748994 -210938860 + MSTD LTR MaLR 1 396 0 1123 306 59 53 chr2 39749052 39749946 -210937908 + HAL1 LINE L1 12 911 -1596 217 202 0 36 chr2 39750299 39750383 -210937471 + T-rich Low_complexity Low_complexity 4 84 0 237 343 86 0 chr2 39751618 39751723 -210936131 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 39752121 39752156 -210935698 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 39753553 39753632 -210934222 - L2 LINE L2 -44 3228 3139 497 248 25 113 chr2 39753707 39753860 -210933994 - MIR SINE MIR -31 231 105 1590 181 0 4 chr2 39753860 39754130 -210933724 + AluJb SINE Alu 41 309 -3 497 248 25 113 chr2 39754130 39754214 -210933640 - MIR SINE MIR -157 105 15 1795 167 0 25 chr2 39754312 39754630 -210933224 - AluJo SINE Alu -2 310 1 1946 150 33 0 chr2 39754777 39755077 -210932777 - AluSx SINE Alu -2 310 1 2529 51 0 0 chr2 39755781 39756077 -210931777 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 39756124 39756145 -210931709 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 39756187 39756225 -210931629 + AT_rich Low_complexity Low_complexity 1 38 0 2864 61 3 66 chr2 39756837 39757073 -210930781 - THE1A LTR MaLR 0 355 150 2089 138 3 0 chr2 39757073 39757369 -210930485 + AluSx SINE Alu 1 297 -15 2864 61 3 66 chr2 39757369 39757511 -210930343 - THE1A LTR MaLR -205 150 1 305 210 48 0 chr2 39757511 39757573 -210930281 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 39757577 39757633 -210930221 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 39758035 39758204 -210929650 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 39758340 39758468 -210929386 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 39758620 39758929 -210928925 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 39759105 39759172 -210928682 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 39760034 39760196 -210927658 - AluSg/x SINE Alu -12 300 128 758 118 10 0 chr2 39760618 39760720 -210927134 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 39760863 39761442 -210926412 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 39761545 39761649 -210926205 - L2 LINE L2 -7 3265 3150 2134 120 3 16 chr2 39762199 39762516 -210925338 - AluSq SINE Alu 0 313 1 1116 194 28 5 chr2 39762553 39762764 -210925090 - MER20 DNA MER1_type 0 219 4 833 278 161 54 chr2 39764987 39765433 -210922421 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 39765754 39765778 -210922076 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 39765778 39766062 -210921792 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 39766707 39767058 -210920796 + MSTD LTR MaLR 1 396 0 1123 306 59 53 chr2 39767116 39768010 -210919844 + HAL1 LINE L1 12 911 -1596 420 313 170 34 chr2 39768139 39768580 -210919274 - MLT1J LTR MaLR -10 501 1 3079 119 2 5 chr2 39768817 39769247 -210918607 + L1PA15 LINE L1 5724 6152 -13 2434 51 0 3 chr2 39769479 39769771 -210918083 + AluY SINE Alu 1 291 -20 382 178 178 9 chr2 39769911 39770018 -210917836 + L2 LINE L2 3187 3311 -2 2428 75 0 0 chr2 39770805 39771100 -210916754 + AluY SINE Alu 1 295 -16 2152 116 0 7 chr2 39771130 39771431 -210916423 + AluSx SINE Alu 6 304 -8 29 60 0 0 chr2 39771511 39771561 -210916293 + AT_rich Low_complexity Low_complexity 1 50 0 2516 30 40 0 chr2 39771945 39772244 -210915610 - AluY SINE Alu 0 311 1 316 305 0 0 chr2 39772739 39772821 -210915033 - MIR SINE MIR -28 234 153 2333 115 0 3 chr2 39773101 39773414 -210914440 - AluSx SINE Alu 0 312 1 184 329 31 112 chr2 39773417 39773578 -210914276 - L2 LINE L2 0 3272 3125 2137 146 24 26 chr2 39774289 39774808 -210913046 - MLT2A2 LTR ERVL 0 554 1 316 229 49 25 chr2 39775107 39775229 -210912625 + MLT1L LTR MaLR 489 613 -2 563 274 19 42 chr2 39775350 39775565 -210912289 - HAL1 LINE L1 -1596 911 702 610 237 85 15 chr2 39775833 39776025 -210911829 - MIR SINE MIR 0 262 55 2203 106 0 0 chr2 39776025 39776335 -210911519 - AluSg SINE Alu 0 310 1 610 237 85 15 chr2 39776335 39776354 -210911500 - MIR SINE MIR -207 55 39 617 263 107 32 chr2 39776361 39776734 -210911120 + L1ME LINE L1 593 993 -5126 801 157 8 22 chr2 39776791 39776925 -210910929 + AluJo SINE Alu 3 134 -178 307 228 0 51 chr2 39776930 39777009 -210910845 + L1ME LINE L1 985 1059 -5060 333 298 8 16 chr2 39777031 39777152 -210910702 + L1ME LINE L1 4025 4144 -1985 302 307 64 7 chr2 39777233 39777373 -210910481 + L1ME LINE L1 4268 4415 -1714 1888 161 62 4 chr2 39777407 39777829 -210910025 - MLT1D LTR MaLR 0 505 1 1886 159 7 0 chr2 39777857 39778159 -210909695 - AluJb SINE Alu -8 304 1 499 295 66 19 chr2 39778160 39778418 -210909436 + L1ME LINE L1 4492 4761 -1368 276 245 75 32 chr2 39778649 39778743 -210909111 + L1ME3A LINE L1 5985 6082 -88 2170 120 0 20 chr2 39778760 39779060 -210908794 - AluSx SINE Alu -18 294 1 27 0 0 0 chr2 39779370 39779397 -210908457 + AT_rich Low_complexity Low_complexity 1 27 0 368 313 30 0 chr2 39779448 39779579 -210908275 + L1ME LINE L1 5512 5646 -458 241 185 37 0 chr2 39779976 39780030 -210907824 - HsTC2 DNA Tc2 -1842 56 1 2174 96 4 0 chr2 39780138 39780461 -210907393 - AluSx SINE Alu 0 324 1 620 280 108 21 chr2 39780542 39780931 -210906923 - L1MC4a LINE L1 -1689 6119 5697 2473 55 0 0 chr2 39781082 39781372 -210906482 + AluY SINE Alu 4 293 -18 2218 133 3 23 chr2 39781390 39781774 -210906080 - L1PA16 LINE L1 -3 6165 5812 1487 177 45 15 chr2 39782925 39783191 -210904663 - AluJo SINE Alu -27 285 12 1943 162 0 0 chr2 39783553 39783855 -210903999 + AluJb SINE Alu 5 306 -6 630 175 167 0 chr2 39784326 39784440 -210903414 + FLAM_C SINE Alu 1 133 0 1259 103 185 13 chr2 39784445 39784677 -210903177 + MSTA LTR MaLR 157 428 0 2430 57 7 0 chr2 39784915 39785214 -210902640 + AluY SINE Alu 1 301 -10 652 167 26 22 chr2 39785223 39785341 -210902513 + GA-rich Low_complexity Low_complexity 1 117 -423 2305 71 6 6 chr2 39785341 39785652 -210902202 + AluY SINE Alu 1 311 0 652 167 26 22 chr2 39785652 39785761 -210902093 + GA-rich Low_complexity Low_complexity 117 540 0 26 30 0 0 chr2 39785997 39786030 -210901824 + AT_rich Low_complexity Low_complexity 1 33 0 203 283 0 9 chr2 39786448 39786554 -210901300 + GA-rich Low_complexity Low_complexity 3 107 0 2309 84 3 0 chr2 39787039 39787336 -210900518 + AluSx SINE Alu 1 298 -14 1196 136 57 4 chr2 39787840 39788068 -210899786 + L1MA8 LINE L1 6029 6268 -23 65 0 0 0 chr2 39788103 39788168 -210899686 + AT_rich Low_complexity Low_complexity 1 65 0 2141 107 0 0 chr2 39788170 39788451 -210899403 + AluSx SINE Alu 11 291 -21 2180 123 0 0 chr2 39788452 39788782 -210899072 + AluSx SINE Alu 1 312 0 449 250 87 44 chr2 39788898 39789192 -210898662 + L1ME3A LINE L1 5590 5891 -230 620 176 130 0 chr2 39789219 39789327 -210898527 + FLAM_A SINE Alu 1 122 -11 263 121 17 0 chr2 39789359 39789417 -210898437 + (TA)n Simple_repeat Simple_repeat 1 59 0 750 113 0 0 chr2 39789560 39789657 -210898197 + AluS SINE Alu 2 98 -215 1145 124 12 0 chr2 39789657 39789818 -210898036 - AluSx SINE Alu -139 173 11 4344 126 19 76 chr2 39789936 39791265 -210896589 - pTR5 LTR ERV1 0 2468 1524 2468 90 0 0 chr2 39791856 39792168 -210895686 - AluSq SINE Alu -1 312 1 1086 153 22 40 chr2 39792510 39792738 -210895116 + L1MB8 LINE L1 5955 6178 0 2595 40 0 3 chr2 39792748 39793051 -210894803 + AluY SINE Alu 1 302 -9 1866 110 62 4 chr2 39793197 39793470 -210894384 + AluSq SINE Alu 2 290 -23 448 273 57 106 chr2 39793633 39793970 -210893884 + MLT1J LTR MaLR 118 437 -74 2364 91 3 0 chr2 39793970 39794268 -210893586 - AluSp SINE Alu -14 299 1 448 273 57 106 chr2 39794268 39794297 -210893557 + MLT1J LTR MaLR 437 466 -45 1836 142 62 0 chr2 39794347 39794636 -210893218 + AluJb SINE Alu 1 307 -5 241 342 117 41 chr2 39795022 39795132 -210892722 - L2 LINE L2 -450 2864 2764 2424 96 0 0 chr2 39795132 39795444 -210892410 + AluSx SINE Alu 1 312 0 241 342 117 41 chr2 39795444 39795599 -210892255 - L2 LINE L2 -550 2764 2579 3518 129 2 4 chr2 39795635 39796131 -210891723 - LOR1a LTR ERV1 -2 495 1 1705 140 0 0 chr2 39796737 39797002 -210890852 + AluSx SINE Alu 37 301 -11 1866 120 40 7 chr2 39797222 39797522 -210890332 - AluSx SINE Alu -2 310 1 321 291 243 19 chr2 39798629 39798839 -210889015 + MIR SINE MIR 6 262 0 220 278 19 0 chr2 39799065 39799119 -210888735 - MER5A DNA MER1_type -5 184 130 2358 76 3 0 chr2 39799126 39799428 -210888426 + AluSp SINE Alu 1 303 -10 2011 130 7 0 chr2 39799438 39799745 -210888109 + AluSq SINE Alu 1 309 -4 2068 126 0 0 chr2 39799753 39800054 -210887800 + AluSx SINE Alu 1 301 -11 1191 198 118 1 chr2 39800085 39800489 -210887365 + LTR54 LTR ERV1 1 466 -32 1513 170 14 54 chr2 39800489 39800617 -210887237 + AluJo SINE Alu 1 133 -179 1770 141 16 29 chr2 39800617 39800923 -210886931 - AluJo SINE Alu -10 302 1 1513 170 14 54 chr2 39800923 39801088 -210886766 + AluJo SINE Alu 133 282 -30 2622 238 50 26 chr2 39801108 39801786 -210886068 + MER21B LTR ERV1 63 756 -107 1481 178 29 61 chr2 39802532 39802909 -210884945 - MLT1A1 LTR MaLR 0 365 1 690 241 114 93 chr2 39803908 39804103 -210883751 + MLT1J LTR MaLR 1 190 -321 2064 134 0 0 chr2 39804103 39804416 -210883438 + AluSq SINE Alu 1 313 0 690 241 114 93 chr2 39804416 39804606 -210883248 + MLT1J LTR MaLR 190 394 -117 1112 237 107 26 chr2 39804635 39804943 -210882911 + LTR40c LTR ERVL 45 377 -88 666 280 78 69 chr2 39804953 39805403 -210882451 - L1ME3A LINE L1 -222 5948 5495 455 204 154 37 chr2 39805406 39805568 -210882286 - L2 LINE L2 -2 3311 3131 1997 108 56 0 chr2 39805571 39805725 -210882129 - AluSx SINE Alu -8 304 160 2053 89 28 0 chr2 39805725 39806016 -210881838 - AluSx SINE Alu -9 303 5 1997 108 56 0 chr2 39806016 39806149 -210881705 - AluSx SINE Alu -152 160 1 402 286 104 39 chr2 39806396 39806550 -210881304 + MIR SINE MIR 13 176 -86 335 303 123 0 chr2 39806640 39806762 -210881092 - MIR SINE MIR -112 150 14 281 258 0 30 chr2 39806792 39806858 -210880996 - L2 LINE L2 -4 3309 3246 361 306 102 0 chr2 39807008 39807116 -210880738 + L2 LINE L2 3148 3266 -6 2021 123 7 0 chr2 39807293 39807595 -210880259 + AluSx SINE Alu 1 304 -8 1793 141 0 4 chr2 39807668 39807969 -210879885 - AluSx SINE Alu 0 312 13 1524 202 0 0 chr2 39808042 39808334 -210879520 + AluJo SINE Alu 1 292 -20 26 0 0 67 chr2 39808335 39808358 -210879496 + AT_rich Low_complexity Low_complexity 1 21 -21 1999 98 7 3 chr2 39808358 39808644 -210879210 + AluSg SINE Alu 1 287 -23 26 0 0 67 chr2 39808644 39808665 -210879189 + AT_rich Low_complexity Low_complexity 21 42 0 2030 106 18 0 chr2 39808673 39808957 -210878897 + AluSx SINE Alu 1 289 -23 1879 157 0 16 chr2 39809278 39809453 -210878401 - AluJb SINE Alu -4 308 139 2248 79 7 0 chr2 39809453 39809743 -210878111 - AluSq SINE Alu -21 292 1 1879 157 0 16 chr2 39809743 39809880 -210877974 - AluJb SINE Alu -173 139 1 1970 110 3 30 chr2 39810253 39810554 -210877300 - AluSx SINE Alu -19 293 1 593 294 29 0 chr2 39811454 39811624 -210876230 + MER5A DNA MER1_type 1 175 -14 188 250 0 0 chr2 39811719 39811767 -210876087 + L2 LINE L2 3262 3309 -4 2074 42 7 88 chr2 39812085 39812416 -210875438 - AluY SINE Alu 0 306 1 206 278 167 0 chr2 39813800 39813854 -210874000 - L2 LINE L2 -76 3196 3134 1527 96 0 10 chr2 39814141 39814350 -210873504 + AluSg/x SINE Alu 82 288 -24 398 88 0 35 chr2 39814406 39814463 -210873391 - AluSq/x SINE Alu -151 152 98 1174 93 6 0 chr2 39814463 39814624 -210873230 + AluSg/x SINE Alu 132 293 -17 2017 125 93 63 chr2 39814626 39814964 -210872890 + MER39 LTR ERV1 258 611 -96 917 185 0 12 chr2 39814964 39815126 -210872728 - FRAM SINE Alu -6 160 1 2017 125 93 63 chr2 39815126 39815186 -210872668 + MER39 LTR ERV1 611 668 -39 272 98 24 0 chr2 39815292 39815333 -210872521 - Alu SINE Alu -260 42 1 701 235 266 11 chr2 39815374 39815595 -210872259 - L2 LINE L2 -2304 1010 847 1935 130 0 7 chr2 39815595 39815888 -210871966 + AluJb SINE Alu 1 291 -21 701 235 266 11 chr2 39815888 39816019 -210871835 - L2 LINE L2 -2467 847 568 1784 256 106 20 chr2 39816316 39816855 -210870999 + MLT1G1 LTR MaLR 1 585 -10 225 0 0 0 chr2 39816972 39816997 -210870857 + (T)n Simple_repeat Simple_repeat 1 25 0 189 114 86 0 chr2 39817092 39817127 -210870727 - MIR SINE MIR -7 255 218 1504 151 37 37 chr2 39817184 39817482 -210870372 - AluJb SINE Alu -14 298 1 2171 114 3 0 chr2 39817620 39817919 -210869935 - AluSq SINE Alu -13 300 1 2198 102 0 0 chr2 39817929 39818222 -210869632 - AluSg1 SINE Alu -16 293 1 22 35 0 0 chr2 39818769 39818798 -210869056 + AT_rich Low_complexity Low_complexity 1 29 0 2218 106 3 0 chr2 39818913 39819224 -210868630 + AluSx SINE Alu 1 312 0 1959 122 7 7 chr2 39819275 39819571 -210868283 + AluJo SINE Alu 1 296 -16 256 193 55 128 chr2 39819639 39819711 -210868143 + MIR SINE MIR 72 135 -127 1914 133 3 7 chr2 39819711 39820005 -210867849 + AluSx SINE Alu 1 293 -19 256 193 55 128 chr2 39820005 39820041 -210867813 + MIR SINE MIR 135 172 -90 360 0 0 0 chr2 39820065 39820105 -210867749 + (CA)n Simple_repeat Simple_repeat 2 41 0 2161 101 3 0 chr2 39820145 39820443 -210867411 - AluSp SINE Alu -14 299 1 1141 144 6 0 chr2 39820540 39820714 -210867140 - FAM SINE Alu 0 175 1 830 291 38 8 chr2 39821385 39821622 -210866232 + MIR SINE MIR 18 261 -1 261 270 27 115 chr2 39821624 39821679 -210866175 + MIR SINE MIR 1 59 -203 1933 142 17 0 chr2 39821679 39821981 -210865873 + AluJb SINE Alu 1 307 -5 261 270 27 115 chr2 39821981 39822073 -210865781 + MIR SINE MIR 59 135 -127 1782 209 26 28 chr2 39822077 39822546 -210865308 + L1 LINE L1 2173 2640 -3506 2129 103 7 0 chr2 39822899 39823191 -210864663 + AluSx SINE Alu 1 294 -18 267 171 26 92 chr2 39823219 39823295 -210864559 + MIR SINE MIR 184 254 -8 694 231 154 14 chr2 39823317 39823490 -210864364 - MIR SINE MIR 0 262 50 1828 157 3 7 chr2 39823490 39823789 -210864065 - AluJo SINE Alu -13 299 2 694 231 154 14 chr2 39823789 39823836 -210864018 - MIR SINE MIR -212 50 11 290 211 215 81 chr2 39825120 39825343 -210862511 + L3 LINE CR1 594 846 -731 501 287 8 0 chr2 39825392 39825521 -210862333 + MIR SINE MIR 84 213 -49 933 123 0 37 chr2 39825536 39825723 -210862131 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 278 204 0 0 chr2 39825759 39825808 -210862046 - MIR SINE MIR -211 51 3 185 367 0 13 chr2 39825854 39825933 -210861921 + L3 LINE CR1 869 946 -631 2241 87 0 3 chr2 39825951 39826249 -210861605 + AluSx SINE Alu 1 297 -15 2277 99 0 0 chr2 39826363 39826666 -210861188 + AluSq SINE Alu 6 308 -5 878 135 0 0 chr2 39826707 39826833 -210861021 + FLAM_C SINE Alu 1 126 -17 286 345 192 0 chr2 39826837 39827014 -210860840 + L3 LINE CR1 1178 1388 -189 367 253 167 37 chr2 39827135 39827297 -210860557 + MER5A DNA MER1_type 7 189 0 2025 96 45 3 chr2 39828658 39828950 -210858904 - AluY SINE Alu -5 306 3 245 256 15 19 chr2 39828986 39829074 -210858780 + MER5A DNA MER1_type 33 126 -62 1453 144 44 72 chr2 39829078 39829260 -210858594 - AluJo SINE Alu 0 312 126 363 23 0 0 chr2 39829260 39829304 -210858550 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1853 125 4 0 chr2 39829314 39829586 -210858268 - AluSx SINE Alu -39 273 1 1453 144 44 72 chr2 39829586 39829712 -210858142 - AluJo SINE Alu -195 117 2 403 307 159 64 chr2 39829758 39830520 -210857334 + L2 LINE L2 1791 2624 -690 753 188 0 16 chr2 39830536 39830664 -210857190 - FLAM_A SINE Alu -7 126 1 1628 143 49 18 chr2 39830733 39831019 -210856835 - AluJo SINE Alu -17 295 1 1236 403 27 0 chr2 39831109 39831402 -210856452 + AluSg SINE Alu 1 301 -9 757 143 84 0 chr2 39831453 39831572 -210856282 - MER96 DNA MER1_type? -12 163 35 251 300 128 39 chr2 39831729 39831909 -210855945 + L2 LINE L2 3073 3268 -4 1331 186 23 30 chr2 39832550 39832851 -210855003 - AluJo SINE Alu -13 299 1 981 181 0 6 chr2 39832869 39833051 -210854803 + FRAM SINE Alu 1 175 -1 1814 149 3 13 chr2 39833169 39833508 -210854346 - AluSx SINE Alu 0 312 1 440 310 29 46 chr2 39833626 39833800 -210854054 - MIR3 SINE MIR -8 200 30 2346 87 6 0 chr2 39833833 39834144 -210853710 + AluSp SINE Alu 1 313 0 351 0 0 0 chr2 39834145 39834184 -210853670 + (TA)n Simple_repeat Simple_repeat 1 39 0 356 133 0 112 chr2 39834195 39834268 -210853586 - AluSg/x SINE Alu -114 188 132 271 86 0 35 chr2 39834288 39834346 -210853508 + (TA)n Simple_repeat Simple_repeat 1 56 0 37 23 0 0 chr2 39834868 39834912 -210852942 + AT_rich Low_complexity Low_complexity 1 44 0 192 271 17 0 chr2 39835091 39835150 -210852704 - L2 LINE L2 0 3313 3254 23 33 0 0 chr2 39835341 39835371 -210852483 + AT_rich Low_complexity Low_complexity 1 30 0 3487 166 22 17 chr2 39836207 39836986 -210850868 + L1M2 LINE L1 2536 3325 -3523 2003 129 7 3 chr2 39836986 39837281 -210850573 + AluSx SINE Alu 1 296 -16 3487 166 22 17 chr2 39837281 39837552 -210850302 + L1M2 LINE L1 3325 3593 -3255 640 176 23 8 chr2 39837571 39837702 -210850152 - FLAM_C SINE Alu 0 133 1 595 178 8 34 chr2 39837936 39838054 -210849800 - FRAM SINE Alu -61 115 1 267 153 17 0 chr2 39838054 39838113 -210849741 + MER39 LTR ERV1 609 668 -39 733 103 71 48 chr2 39838359 39838518 -210849336 + FLAM_C SINE Alu 1 133 0 1631 194 154 26 chr2 39838808 39839237 -210848617 + LTR2B LTR ERV1 7 490 0 1917 116 39 0 chr2 39839307 39839591 -210848263 + AluSc SINE Alu 2 296 -13 186 43 0 0 chr2 39839592 39839615 -210848239 + (T)n Simple_repeat Simple_repeat 1 23 0 1827 100 4 4 chr2 39839615 39839865 -210847989 - AluSx SINE Alu -62 250 1 293 272 96 52 chr2 39840170 39840306 -210847548 + MIR3 SINE MIR 24 165 -43 1547 122 146 36 chr2 39840982 39841318 -210846536 - THE1C LTR MaLR -2 373 1 1882 133 20 0 chr2 39841415 39841715 -210846139 + AluJb SINE Alu 5 310 -2 239 291 73 18 chr2 39841849 39841959 -210845895 + L2 LINE L2 3197 3312 -1 1143 213 30 0 chr2 39842255 39842460 -210845394 + MIR SINE MIR 20 234 -28 1785 104 4 12 chr2 39842460 39842719 -210845135 + AluSq SINE Alu 35 291 -22 1143 213 30 0 chr2 39842719 39842748 -210845106 + MIR SINE MIR 234 261 -1 324 230 59 82 chr2 39843245 39843274 -210844580 + L1MC4a LINE L1 5797 5825 -1983 2118 51 0 29 chr2 39843274 39843549 -210844305 + AluY SINE Alu 45 311 0 324 230 59 82 chr2 39843549 39843654 -210844200 + L1MC4a LINE L1 5825 5928 -1880 772 184 5 70 chr2 39843822 39843893 -210843961 + MER53 DNA DNA 2 76 -113 2288 75 7 0 chr2 39843893 39844187 -210843667 - AluSc SINE Alu -11 298 3 772 184 5 70 chr2 39844187 39844316 -210843538 + MER53 DNA DNA 76 189 0 594 239 0 0 chr2 39844484 39844593 -210843261 + MER44D DNA MER2_type 5 383 -226 1980 126 0 0 chr2 39844596 39844881 -210842973 + AluSx SINE Alu 3 287 -25 344 266 45 71 chr2 39844930 39845084 -210842770 + HAL1b LINE L1 1198 1347 -1 2380 56 7 3 chr2 39845220 39845245 -210842609 - AluY SINE Alu -5 306 283 414 0 0 0 chr2 39845245 39845291 -210842563 + (TG)n Simple_repeat Simple_repeat 1 46 0 2380 56 7 3 chr2 39845291 39845570 -210842284 - AluY SINE Alu -28 283 1 183 266 319 18 chr2 39846102 39846182 -210841672 - MIR SINE MIR -56 206 151 2173 113 0 0 chr2 39846182 39846493 -210841361 + AluSx SINE Alu 1 311 -1 183 266 319 18 chr2 39846493 39846525 -210841329 - MIR SINE MIR -111 151 60 2112 99 24 0 chr2 39847719 39848011 -210839843 - AluSp SINE Alu -14 299 1 215 179 0 167 chr2 39848628 39848684 -210839170 + MIR SINE MIR 35 76 -186 2175 115 0 0 chr2 39848684 39848988 -210838866 - AluSx SINE Alu -8 304 1 215 179 0 167 chr2 39848988 39849009 -210838845 + MIR SINE MIR 76 99 -163 240 230 230 22 chr2 39849094 39849158 -210838696 + MIR SINE MIR 92 141 -121 321 181 28 14 chr2 39849158 39849230 -210838624 + MER116 DNA Mariner 5 77 -3 240 230 230 22 chr2 39849230 39849300 -210838554 + MIR SINE MIR 141 254 -8 498 285 145 9 chr2 39849386 39849607 -210838247 + MIR SINE MIR 6 256 -6 1781 166 0 22 chr2 39849710 39850023 -210837831 - AluJb SINE Alu -6 306 1 270 272 218 27 chr2 39850071 39850218 -210837636 - MIR3 SINE MIR -1 207 33 1840 145 21 0 chr2 39850555 39850845 -210837009 + AluSx SINE Alu 1 296 -16 191 214 0 24 chr2 39851670 39851712 -210836142 + MIR SINE MIR 17 57 -151 295 310 97 71 chr2 39851964 39852316 -210835538 - L3 LINE CR1 -1102 475 115 2142 114 3 0 chr2 39852316 39852615 -210835239 + AluSq SINE Alu 1 300 -13 1233 144 16 98 chr2 39853056 39853274 -210834580 - MER46A DNA MER2_type -2495 236 40 2291 85 0 0 chr2 39853274 39853568 -210834286 - AluSq SINE Alu -19 294 1 1233 144 16 98 chr2 39853568 39853605 -210834249 - MER46A DNA MER2_type -2691 40 2 840 131 0 15 chr2 39854094 39854224 -210833630 + AluJo/FLAM SINE Alu 3 130 -172 1783 164 3 3 chr2 39854226 39854538 -210833316 + AluSx SINE Alu 1 312 0 1227 225 75 36 chr2 39854628 39854988 -210832866 - MLT1L LTR MaLR -144 471 98 2092 99 20 3 chr2 39855410 39855714 -210832140 - AluSx SINE Alu -3 309 1 2273 60 3 0 chr2 39855922 39856265 -210831589 - AluY SINE Alu 0 344 1 993 196 91 0 chr2 39856283 39856492 -210831362 + L1ME2 LINE L1 5703 5930 -234 2061 125 0 3 chr2 39857129 39857432 -210830422 + AluSx SINE Alu 1 302 -10 2206 112 0 0 chr2 39857631 39857927 -210829927 + AluSx SINE Alu 1 296 -16 2279 78 3 0 chr2 39857933 39858228 -210829626 + AluSp SINE Alu 3 298 -15 301 208 0 0 chr2 39858234 39858282 -210829572 - MER20 DNA MER1_type -170 49 2 265 257 110 59 chr2 39858482 39858513 -210829341 - MIR3 SINE MIR -27 181 153 2253 81 3 13 chr2 39858513 39858821 -210829033 - AluSp SINE Alu -8 305 1 265 257 110 59 chr2 39858821 39858925 -210828929 - MIR3 SINE MIR -55 153 39 1106 186 70 8 chr2 39859622 39859864 -210827990 + L1MD3 LINE L1 7739 7995 0 861 87 0 0 chr2 39859891 39860006 -210827848 + AluJb SINE Alu 1 115 -197 30 83 0 0 chr2 39860006 39860078 -210827776 + AT_rich Low_complexity Low_complexity 1 72 0 1560 167 29 14 chr2 39860158 39860434 -210827420 - AluJb SINE Alu -32 280 1 1754 139 7 20 chr2 39861098 39861392 -210826462 + AluJo SINE Alu 2 291 -21 21 0 0 0 chr2 39861426 39861447 -210826407 + AT_rich Low_complexity Low_complexity 1 21 0 888 130 0 0 chr2 39862115 39862246 -210825608 - FLAM_C SINE Alu -6 137 7 250 242 121 100 chr2 39862350 39862581 -210825273 - L2 LINE L2 -99 3173 2938 2136 131 0 0 chr2 39862902 39863214 -210824640 + AluSx SINE Alu 1 312 0 626 291 0 17 chr2 39863380 39863552 -210824302 - MIR SINE MIR -76 186 18 1566 172 28 7 chr2 39863607 39863897 -210823957 + AluJo SINE Alu 2 297 -15 198 240 0 0 chr2 39864194 39864244 -210823610 + GA-rich Low_complexity Low_complexity 4 53 0 2365 71 0 3 chr2 39864316 39864626 -210823228 + AluY SINE Alu 1 309 -2 843 152 7 0 chr2 39864842 39864980 -210822874 + AluJb SINE Alu 1 139 -173 239 0 0 31 chr2 39865000 39865032 -210822822 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2036 97 0 17 chr2 39865375 39865700 -210822154 - AluSx SINE Alu 0 320 1 2266 94 3 0 chr2 39865822 39866120 -210821734 - AluSq SINE Alu -14 299 1 996 175 16 5 chr2 39866124 39866313 -210821541 - AluJo SINE Alu -2 310 120 830 160 0 0 chr2 39866337 39866468 -210821386 - FLAM_C SINE Alu -7 136 6 2314 101 0 0 chr2 39866483 39866791 -210821063 - AluSx SINE Alu -4 308 1 1787 137 4 4 chr2 39867652 39867922 -210819932 - AluSx SINE Alu -19 293 24 890 124 0 16 chr2 39868482 39868611 -210819243 - FLAM_C SINE Alu -5 128 2 2199 98 0 0 chr2 39868628 39868915 -210818939 - AluSq SINE Alu -26 287 1 1061 85 55 0 chr2 39868964 39869128 -210818726 - L1MA5 LINE L1 -3 6297 6125 556 47 0 0 chr2 39869228 39869292 -210818562 + AluSq/x SINE Alu 62 125 -187 362 207 259 16 chr2 39869292 39869485 -210818369 + L2 LINE L2 1032 1271 -2043 440 307 48 7 chr2 39869946 39870092 -210817762 + MIR3 SINE MIR 41 193 -15 189 338 59 0 chr2 39870180 39870248 -210817606 - L2 LINE L2 -44 3228 3157 1931 166 43 98 chr2 39870276 39870595 -210817259 + MER65C LTR ERV1 1 336 -125 1815 150 3 10 chr2 39870595 39870908 -210816946 + AluJo SINE Alu 1 311 -1 1931 166 43 98 chr2 39870908 39871012 -210816842 + MER65C LTR ERV1 336 396 -65 2045 129 3 0 chr2 39871012 39871307 -210816547 - AluSx SINE Alu -16 296 1 1931 166 43 98 chr2 39871307 39871370 -210816484 + MER65C LTR ERV1 396 461 0 1627 173 0 4 chr2 39872342 39872619 -210815235 + AluJb SINE Alu 2 277 -35 213 39 0 0 chr2 39872628 39872654 -210815200 + (CA)n Simple_repeat Simple_repeat 2 27 0 433 156 0 0 chr2 39872669 39872733 -210815121 + FRAM/FAM SINE Alu 13 76 -100 1888 130 27 3 chr2 39872796 39873095 -210814759 - AluSx SINE Alu 0 312 7 2548 29 3 0 chr2 39873306 39873614 -210814240 - AluYa5 SINE Alu -2 309 1 1957 104 50 0 chr2 39873716 39873994 -210813860 + AluSq SINE Alu 1 292 -21 2083 112 0 0 chr2 39874038 39874324 -210813530 + AluSx SINE Alu 17 302 -10 2147 108 7 0 chr2 39874535 39874842 -210813012 + AluSg SINE Alu 1 309 -1 2193 99 3 0 chr2 39875200 39875493 -210812361 + AluSx SINE Alu 1 294 -18 1959 96 44 0 chr2 39875503 39875804 -210812050 + AluSx SINE Alu 1 313 0 752 203 0 0 chr2 39876110 39876243 -210811611 + MER2 DNA MER2_type 4 136 -209 1094 172 24 10 chr2 39876286 39876451 -210811403 - AluJb SINE Alu -20 292 122 186 71 0 0 chr2 39876451 39876479 -210811375 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1094 172 24 10 chr2 39876479 39876522 -210811332 - AluJb SINE Alu -190 122 81 214 311 16 0 chr2 39877289 39877350 -210810504 + L2 LINE L2 3206 3267 -5 2096 104 0 0 chr2 39877375 39877653 -210810201 - AluSg SINE Alu -32 278 1 2086 112 10 0 chr2 39877727 39878023 -210809831 + AluSq SINE Alu 1 299 -14 1864 140 0 10 chr2 39878028 39878335 -210809519 + AluSx SINE Alu 1 304 -8 1128 138 6 0 chr2 39878335 39878509 -210809345 + AluSg/x SINE Alu 134 308 -4 637 122 0 57 chr2 39879101 39879201 -210808653 - AluSg/x SINE Alu -7 302 209 1781 103 0 4 chr2 39879201 39879444 -210808410 - AluSq SINE Alu -71 242 1 637 122 0 57 chr2 39879444 39879466 -210808388 - AluSg/x SINE Alu -100 209 187 1810 151 10 3 chr2 39879725 39880024 -210807830 + AluJo SINE Alu 1 301 -11 2118 117 0 0 chr2 39880025 39880324 -210807530 + AluSx SINE Alu 1 299 -13 2146 84 40 0 chr2 39881203 39881500 -210806354 + AluSc SINE Alu 1 309 0 236 137 0 78 chr2 39881501 39881552 -210806302 - LTR9 LTR ERV1 -131 481 435 187 221 13 78 chr2 39882068 39882145 -210805709 - L2 LINE L2 -1 3271 3200 368 192 39 58 chr2 39882175 39882279 -210805575 - L1MC4a LINE L1 -467 7341 7240 2213 125 60 165 chr2 39882447 39882635 -210805219 + LTR42 LTR ERVL 1 207 -288 1844 91 0 60 chr2 39882635 39882920 -210804934 + AluSq SINE Alu 1 268 -45 437 87 29 0 chr2 39882924 39882993 -210804861 + Alu SINE Alu 239 309 0 2213 125 60 165 chr2 39882993 39883284 -210804570 + LTR42 LTR ERVL 210 495 0 1943 97 0 78 chr2 39883520 39883839 -210804015 + AluSx SINE Alu 1 294 -18 2093 97 7 0 chr2 39884067 39884355 -210803499 + AluSg1 SINE Alu 2 291 -18 321 185 15 0 chr2 39884374 39884439 -210803415 - Tigger8 DNA MER2_type -432 234 169 290 253 65 113 chr2 39884700 39884772 -210803082 + L1M4 LINE L1 25 99 -6443 684 187 0 43 chr2 39884772 39884911 -210802943 - FLAM_A SINE Alu 0 133 1 290 253 65 113 chr2 39884911 39885067 -210802787 + L1M4 LINE L1 99 242 -6300 317 331 88 6 chr2 39885316 39885476 -210802378 + L1M4 LINE L1 716 888 -5654 964 191 12 6 chr2 39885513 39885681 -210802173 + FAM SINE Alu 1 169 -6 1593 221 139 51 chr2 39885699 39885745 -210802109 + L1M4 LINE L1 1305 1346 -5479 1998 135 0 0 chr2 39885745 39886041 -210801813 + AluSx SINE Alu 1 296 -16 1593 221 139 51 chr2 39886041 39886101 -210801753 + L1M4 LINE L1 1346 1399 -5426 1650 126 30 15 chr2 39886101 39886372 -210801482 + AluSx SINE Alu 1 275 -37 204 67 0 0 chr2 39886376 39886406 -210801448 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1593 221 139 51 chr2 39886406 39887112 -210800742 + L1M4 LINE L1 1401 2324 -4501 2313 90 0 0 chr2 39887112 39887411 -210800443 + AluSc SINE Alu 1 299 -10 1593 221 139 51 chr2 39887411 39887567 -210800287 + L1M4 LINE L1 2324 2465 -4360 22 35 0 0 chr2 39887624 39887653 -210800201 + AT_rich Low_complexity Low_complexity 1 29 0 967 114 0 0 chr2 39887653 39887785 -210800069 + AluSq/x SINE Alu 1 132 -181 2197 97 7 0 chr2 39887787 39888086 -210799768 + AluSp SINE Alu 1 301 -12 305 265 163 96 chr2 39888338 39888388 -210799466 - MER5B DNA MER1_type 0 178 133 1482 157 60 8 chr2 39888388 39888656 -210799198 + AluJb SINE Alu 6 287 -25 305 265 163 96 chr2 39888656 39888771 -210799083 - MER5B DNA MER1_type -45 133 2 750 246 86 12 chr2 39889025 39889269 -210798585 - MER58B DNA MER1_type 0 341 80 1490 151 39 18 chr2 39889270 39889554 -210798300 + AluJo SINE Alu 1 290 -22 2068 94 11 0 chr2 39889562 39889849 -210798005 + AluSx SINE Alu 1 290 -22 411 272 201 6 chr2 39889850 39890019 -210797835 + L1MC/D LINE L1 5429 5630 -2178 954 110 19 26 chr2 39890119 39890274 -210797580 - AluSg/x SINE Alu -18 292 139 29 0 0 0 chr2 39890278 39890307 -210797547 + AT_rich Low_complexity Low_complexity 1 29 0 1853 120 7 17 chr2 39892457 39892757 -210795097 + AluSx SINE Alu 1 297 -15 306 258 0 0 chr2 39894169 39894231 -210793623 + FRAM/FAM SINE Alu 1 59 -107 1407 167 70 11 chr2 39895318 39895588 -210792266 + AluJb SINE Alu 6 291 -21 21 89 0 0 chr2 39897589 39897645 -210790209 + GC_rich Low_complexity Low_complexity 1 56 0 22 56 0 0 chr2 39897994 39898030 -210789824 + GC_rich Low_complexity Low_complexity 1 36 0 1792 160 14 3 chr2 39898530 39898817 -210789037 + AluSx SINE Alu 12 301 -11 410 189 15 152 chr2 39898911 39899043 -210788811 + MLT2B1 LTR ERVL 351 520 0 243 222 97 0 chr2 39899046 39899118 -210788736 - L1ME LINE L1 -250 5871 5793 344 314 146 58 chr2 39899214 39899287 -210788567 - L1ME LINE L1 -607 5514 5449 2406 83 3 0 chr2 39899287 39899577 -210788277 + AluY SINE Alu 1 291 -20 2077 134 10 0 chr2 39899587 39899885 -210787969 + AluSg SINE Alu 1 301 -9 344 314 146 58 chr2 39899885 39900026 -210787828 - L1ME LINE L1 -680 5441 5269 1109 136 0 7 chr2 39900171 39900326 -210787528 - AluSx SINE Alu -15 297 144 548 103 0 0 chr2 39900338 39900416 -210787438 - AluSx SINE Alu -233 79 2 932 162 7 13 chr2 39900484 39900638 -210787216 - AluJb SINE Alu -78 234 82 55 45 0 0 chr2 39900872 39900938 -210786916 + GC_rich Low_complexity Low_complexity 1 66 0 2293 86 3 3 chr2 39902880 39903171 -210784683 + AluSx SINE Alu 1 291 -21 2311 76 4 0 chr2 39903264 39903541 -210784313 + AluSp SINE Alu 1 278 -35 2345 74 9 40 chr2 39903543 39903866 -210783988 + AluSq SINE Alu 1 313 0 682 156 0 8 chr2 39904004 39904126 -210783728 + FLAM_C SINE Alu 12 132 -11 22 0 0 0 chr2 39904639 39904661 -210783193 + AT_rich Low_complexity Low_complexity 1 22 0 2059 136 23 3 chr2 39905035 39905337 -210782517 - AluSx SINE Alu -4 308 1 11341 31 11 85 chr2 39905349 39906840 -210781014 - SVA Other Other -1 1385 5 195 42 0 0 chr2 39906840 39906864 -210780990 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 698 162 8 0 chr2 39907293 39907410 -210780444 + FLAM_C SINE Alu 1 118 -15 22 0 0 0 chr2 39907410 39907432 -210780422 + AT_rich Low_complexity Low_complexity 1 22 0 2278 88 3 3 chr2 39907432 39907752 -210780102 - AluSp SINE Alu 0 320 1 598 194 31 16 chr2 39907808 39907937 -210779917 + FLAM_C SINE Alu 3 133 -10 930 186 75 91 chr2 39908016 39908323 -210779531 - AluJo SINE Alu 0 302 1 2101 101 51 3 chr2 39908330 39908626 -210779228 - AluSg SINE Alu 0 310 1 6249 140 36 35 chr2 40008700 40009457 -210678397 - Tigger2 DNA MER2_type -1608 1110 350 2471 86 0 3 chr2 40009457 40009761 -210678093 - AluSp SINE Alu -10 303 1 6249 140 36 35 chr2 40009761 40010112 -210677742 - Tigger2 DNA MER2_type -2368 350 1 1843 146 18 7 chr2 40010402 40010682 -210677172 - AluSx SINE Alu -29 283 1 225 232 89 0 chr2 40010724 40010780 -210677074 - L1ME LINE L1 -377 5789 5729 1556 113 113 31 chr2 40010937 40011194 -210676660 + AluJo SINE Alu 25 302 -10 1163 266 125 51 chr2 40011363 40011912 -210675942 - L2 LINE L2 0 3313 2713 844 155 0 0 chr2 40011912 40012041 -210675813 - FLAM_C SINE Alu 0 133 5 1163 266 125 51 chr2 40012041 40012135 -210675719 - L2 LINE L2 -600 2713 2627 500 246 30 51 chr2 40012155 40012391 -210675463 - L1MC4a LINE L1 -1907 5901 5671 1242 61 0 0 chr2 40012600 40012747 -210675107 + AluSg/x SINE Alu 156 302 -10 198 0 0 0 chr2 40012747 40012769 -210675085 + (TA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr2 40012769 40012791 -210675063 + (T)n Simple_repeat Simple_repeat 1 22 0 787 277 115 64 chr2 40013205 40013718 -210674136 + HAL1 LINE L1 145 683 -1824 666 63 11 32 chr2 40013825 40013920 -210673934 - L1PA14 LINE L1 -203 5958 5866 2054 130 27 43 chr2 40013921 40014106 -210673748 - L1MB1 LINE L1 -43 6125 5947 2210 99 33 3 chr2 40014106 40014408 -210673446 - AluSq SINE Alu -2 311 1 2054 130 27 43 chr2 40014408 40014592 -210673262 - L1MB1 LINE L1 -221 5947 5762 401 96 0 0 chr2 40014603 40014655 -210673199 + L1M3 LINE L1 5611 5662 -506 897 95 95 15 chr2 40014655 40014792 -210673062 + AluSg SINE Alu 1 148 -162 551 176 0 0 chr2 40014792 40014883 -210672971 - L1MB1 LINE L1 -420 5748 5658 475 84 0 36 chr2 40014883 40014966 -210672888 - Alu SINE Alu 0 312 233 1003 214 93 43 chr2 40015156 40015436 -210672418 - AluJo SINE Alu -8 294 1 1964 137 10 13 chr2 40015996 40016309 -210671545 + AluJb SINE Alu 1 312 0 349 150 0 0 chr2 40016579 40016639 -210671215 - MER21A LTR ERV1 -355 576 517 1432 176 26 4 chr2 40016641 40016913 -210670941 + AluSx SINE Alu 1 278 -34 1324 183 11 18 chr2 40017017 40017301 -210670553 - L1MB1 LINE L1 -821 5325 5044 * 1934 169 0 27 chr2 40017298 40017670 -210670184 + L1M4 LINE L1 3761 4122 -2024 297 194 28 0 chr2 40017674 40017746 -210670108 + L1M4 LINE L1 5173 5246 -900 2516 138 30 8 chr2 40017747 40018144 -210669710 - MER73 LTR ERVL 0 644 239 957 181 25 48 chr2 40018161 40018251 -210669603 + L1M4 LINE L1 5232 5323 -851 2297 91 0 3 chr2 40018251 40018548 -210669306 + AluSx SINE Alu 1 296 -16 957 181 25 48 chr2 40018548 40018709 -210669145 + L1M4 LINE L1 5323 5476 -698 1686 67 62 0 chr2 40018718 40018943 -210668911 - L1PA10 LINE L1 -11 6157 5919 423 289 33 0 chr2 40019050 40019171 -210668683 + L2 LINE L2 2192 2316 -998 292 180 0 16 chr2 40019177 40019238 -210668616 + L2 LINE L2 2625 2684 -630 616 249 6 65 chr2 40019258 40019427 -210668427 + MER91A DNA MER1_type 13 171 -25 830 301 102 10 chr2 40019463 40020008 -210667846 + L2 LINE L2 2715 3312 -1 825 111 0 0 chr2 40020088 40020196 -210667658 + FLAM_C SINE Alu 1 108 -35 1997 108 7 3 chr2 40020208 40020494 -210667360 + Tigger3(Golem) DNA MER2_type 2605 2891 -138 414 268 39 62 chr2 40020629 40020808 -210667046 + MIR SINE MIR 82 256 -6 1145 189 31 4 chr2 40022823 40023082 -210664772 - AluSq SINE Alu -8 305 40 333 246 59 34 chr2 40023948 40024066 -210663788 - MIR SINE MIR -60 148 28 995 142 261 43 chr2 40024416 40024669 -210663185 + AluJb SINE Alu 1 308 -4 1487 142 87 36 chr2 40025138 40025413 -210662441 + AluJb SINE Alu 1 289 -23 1728 167 18 4 chr2 40025818 40026094 -210661760 + AluJb SINE Alu 20 299 -13 8806 114 50 26 chr2 40026102 40026142 -210661712 - Tigger2 DNA MER2_type -151 2567 2529 2174 131 0 6 chr2 40026142 40026454 -210661400 - AluSx SINE Alu 0 312 3 8806 114 50 26 chr2 40026454 40027818 -210660036 - Tigger2 DNA MER2_type -189 2529 1129 1087 104 0 0 chr2 40027931 40028075 -210659779 + AluSg/x SINE Alu 154 297 -15 1720 111 43 8 chr2 40028861 40029114 -210658740 + AluSg SINE Alu 34 295 -15 2132 133 7 0 chr2 40029143 40029444 -210658410 - AluSq SINE Alu -10 303 1 1905 135 4 0 chr2 40029829 40030110 -210657744 - AluSp SINE Alu -11 302 21 2166 105 0 16 chr2 40030641 40030946 -210656908 - AluSc SINE Alu -9 300 1 1499 176 12 46 chr2 40031088 40031271 -210656583 - AluJo SINE Alu 0 312 143 207 69 0 0 chr2 40031271 40031300 -210656554 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1499 176 12 46 chr2 40031300 40031439 -210656415 - AluJo SINE Alu -169 143 1 1477 201 44 0 chr2 40031826 40032124 -210655730 - AluJb SINE Alu -1 311 1 198 182 23 0 chr2 40032156 40032200 -210655654 - MIR SINE MIR -32 230 186 269 320 12 35 chr2 40032592 40032764 -210655090 + GA-rich Low_complexity Low_complexity 4 171 0 228 139 0 0 chr2 40032779 40032822 -210655032 - Alu SINE Alu -259 43 1 1557 91 5 5 chr2 40032992 40033201 -210654653 + AluSc SINE Alu 99 307 -2 204 40 0 0 chr2 40033335 40033360 -210654494 + (CA)n Simple_repeat Simple_repeat 2 26 0 2148 101 27 7 chr2 40034067 40034363 -210653491 + AluSg1 SINE Alu 1 302 -7 2303 106 0 0 chr2 40034406 40034698 -210653156 + AluSx SINE Alu 1 292 -20 989 133 170 0 chr2 40034698 40034863 -210652991 + AluY SINE Alu 1 193 -118 339 49 0 0 chr2 40034963 40035004 -210652850 - AluY SINE Alu -261 41 1 232 160 20 0 chr2 40035008 40035058 -210652796 + L1MC5 LINE L1 7701 7751 -210 2066 120 6 35 chr2 40035058 40035375 -210652479 + AluSx SINE Alu 1 308 -4 261 0 0 0 chr2 40035375 40035404 -210652450 + (TA)n Simple_repeat Simple_repeat 2 30 0 1809 164 14 0 chr2 40035511 40035804 -210652050 + AluSq SINE Alu 1 297 -16 2460 56 0 34 chr2 40037069 40037389 -210650465 + AluSq SINE Alu 1 309 -4 1055 179 26 0 chr2 40037534 40037729 -210650125 - MER41C LTR ERV1 0 554 355 1383 126 0 0 chr2 40037858 40038048 -210649806 + AluSg/x SINE Alu 108 297 -13 297 191 45 0 chr2 40038226 40038315 -210649539 - L1ME4a LINE L1 -12 6109 6017 2214 108 3 19 chr2 40038442 40038757 -210649097 + AluSq SINE Alu 3 312 -1 1209 87 7 0 chr2 40038758 40038939 -210648915 + AluSg/x SINE Alu 130 311 0 891 171 33 0 chr2 40038945 40039097 -210648757 + FRAM SINE Alu 10 166 -10 1667 149 25 16 chr2 40039206 40039527 -210648327 - MER33 DNA MER1_type 0 324 1 899 112 0 0 chr2 40040014 40040139 -210647715 + FRAM SINE Alu 41 165 -11 274 253 11 53 chr2 40040139 40040234 -210647620 - L1ME2 LINE L1 -140 6024 5934 1139 259 98 51 chr2 40040296 40040828 -210647026 - LTR67 LTR ERVL 0 557 1 1737 181 3 16 chr2 40041051 40041360 -210646494 + AluJo SINE Alu 1 305 -7 306 219 32 89 chr2 40042084 40042207 -210645647 - MIR SINE MIR -70 192 77 1087 68 0 0 chr2 40042690 40042822 -210645032 - AluSp/q SINE Alu -4 309 178 459 146 135 0 chr2 40042935 40043024 -210644830 + MER3 DNA MER1_type 109 209 0 231 232 71 0 chr2 40043373 40043429 -210644425 - L3 LINE CR1 -3 1574 1515 248 225 4 0 chr2 40043552 40043608 -210644246 + MIR SINE MIR 63 121 -87 657 183 75 0 chr2 40043685 40043805 -210644049 - FLAM_A SINE Alu -2 131 3 2089 127 0 0 chr2 40043830 40044137 -210643717 - AluSx SINE Alu 0 307 1 2540 169 4 15 chr2 40044881 40045348 -210642506 + L1MB7 LINE L1 5723 6184 0 1205 199 40 43 chr2 40045592 40045869 -210641985 - AluJo SINE Alu -12 300 25 300 314 118 44 chr2 40046018 40046314 -210641540 + L2 LINE L2 2587 2904 -410 2144 123 3 10 chr2 40046323 40046631 -210641223 - AluSx SINE Alu -6 306 1 1002 161 51 46 chr2 40046751 40046968 -210640886 - MER20 DNA MER1_type 0 219 2 1579 155 61 37 chr2 40046995 40047292 -210640562 + AluJb SINE Alu 1 304 -8 1397 138 14 9 chr2 40047440 40047658 -210640196 + AluJb SINE Alu 83 301 -11 29 0 0 0 chr2 40047995 40048024 -210639830 + AT_rich Low_complexity Low_complexity 1 29 0 1935 127 7 14 chr2 40048038 40048322 -210639532 - AluSg SINE Alu -27 283 2 1918 149 0 16 chr2 40048719 40049028 -210638826 - AluJo SINE Alu -8 304 1 1547 101 5 0 chr2 40049055 40049254 -210638600 + AluSg/x SINE Alu 91 290 -22 1822 161 10 33 chr2 40049941 40050246 -210637608 - AluJb SINE Alu -14 298 1 204 354 92 15 chr2 40051070 40051200 -210636654 - L2 LINE L2 0 3272 3133 27 45 0 45 chr2 40051376 40051411 -210636443 + AT_rich Low_complexity Low_complexity 1 33 -31 1668 166 0 55 chr2 40051411 40051719 -210636135 - AluJo SINE Alu -21 291 1 27 45 0 45 chr2 40051719 40051750 -210636104 + AT_rich Low_complexity Low_complexity 33 64 0 21 82 0 0 chr2 40051952 40052001 -210635853 + AT_rich Low_complexity Low_complexity 1 49 0 2050 129 13 10 chr2 40052369 40052679 -210635175 + AluSx SINE Alu 1 311 -1 1948 123 0 14 chr2 40053125 40053449 -210634405 - AluSg SINE Alu 0 310 1 268 211 0 18 chr2 40053522 40053579 -210634275 + Charlie4 DNA MER1_type 1883 1938 -23 1642 170 24 20 chr2 40053703 40053997 -210633857 + AluJb SINE Alu 1 295 -17 2028 140 0 3 chr2 40054077 40054387 -210633467 + AluSx SINE Alu 1 309 0 1295 122 0 6 chr2 40054467 40054648 -210633206 + AluJb SINE Alu 7 186 -126 2316 98 0 3 chr2 40055177 40055474 -210632380 + AluSx SINE Alu 1 296 -16 213 323 53 45 chr2 40056073 40056206 -210631648 + MIR SINE MIR 83 216 -46 21 0 0 0 chr2 40056703 40056724 -210631130 + AT_rich Low_complexity Low_complexity 1 21 0 1030 170 18 0 chr2 40056853 40057018 -210630836 + AluJb SINE Alu 137 304 -8 484 297 61 65 chr2 40057856 40058102 -210629752 + MIR SINE MIR 12 256 -6 1038 133 0 0 chr2 40058162 40058305 -210629549 - FRAM SINE Alu -14 162 20 302 299 146 47 chr2 40058307 40058608 -210629246 + L1MC4a LINE L1 3366 3696 -2450 1967 144 23 3 chr2 40058616 40058915 -210628939 + AluSx SINE Alu 1 305 -7 429 319 115 48 chr2 40059037 40059509 -210628345 + L1MC4a LINE L1 5296 5504 -855 2193 114 10 0 chr2 40059509 40059808 -210628046 + AluSx SINE Alu 1 302 -10 429 319 115 48 chr2 40059808 40059895 -210627959 + L1MC4a LINE L1 5504 5584 -775 23 0 0 0 chr2 40060067 40060090 -210627764 + AT_rich Low_complexity Low_complexity 1 23 0 824 187 0 7 chr2 40060135 40060274 -210627580 - FLAM_C SINE Alu -4 139 2 1867 107 0 50 chr2 40060756 40061036 -210626818 - AluSx SINE Alu -46 266 1 23 54 0 0 chr2 40061935 40061972 -210625882 + AT_rich Low_complexity Low_complexity 1 37 0 2492 76 3 0 chr2 40061989 40062293 -210625561 + AluSp SINE Alu 1 305 -8 484 271 96 21 chr2 40063154 40063342 -210624512 - L2 LINE L2 -3 3310 3109 825 175 0 0 chr2 40063427 40063570 -210624284 + FLAM_C SINE Alu 1 143 0 993 158 0 12 chr2 40063611 40063805 -210624049 + AluJb SINE Alu 120 311 0 329 337 83 24 chr2 40063844 40064049 -210623805 - L2 LINE L2 -359 2955 2739 1053 194 29 0 chr2 40064071 40064241 -210623613 + FAM SINE Alu 1 175 0 21 0 0 0 chr2 40064492 40064513 -210623341 + AT_rich Low_complexity Low_complexity 1 21 0 1059 64 64 0 chr2 40064517 40064657 -210623197 + AluSg/x SINE Alu 145 293 -19 2420 65 0 7 chr2 40066315 40066609 -210621245 - AluY SINE Alu -19 292 1 2498 222 37 36 chr2 40066612 40068004 -210619850 - L1M4c LINE L1 -4782 2177 673 266 312 44 21 chr2 40068077 40068105 -210619749 + MER5A DNA MER1_type 33 59 -130 1985 111 41 0 chr2 40068105 40068404 -210619450 + AluSx SINE Alu 1 310 0 266 312 44 21 chr2 40068404 40068510 -210619344 + MER5A DNA MER1_type 59 185 -4 874 20 0 0 chr2 40068846 40068946 -210618908 - AluY SINE Alu -210 100 1 278 338 81 0 chr2 40069022 40069158 -210618696 + L2 LINE L2 3166 3312 -1 250 289 29 77 chr2 40069477 40069581 -210618273 - MIR3 SINE MIR -100 108 10 1923 199 50 24 chr2 40070576 40071039 -210616815 - L1MC4 LINE L1 0 8042 7568 1040 58 0 0 chr2 40071139 40071286 -210616568 + AluSg/x SINE Alu 162 308 0 1872 152 24 7 chr2 40071814 40072111 -210615743 + AluJo SINE Alu 1 302 -10 525 321 96 23 chr2 40072500 40072578 -210615276 + MIR SINE MIR 16 87 -175 2289 89 3 3 chr2 40072578 40072880 -210614974 - AluSq SINE Alu -11 302 1 525 321 96 23 chr2 40072880 40073019 -210614835 + MIR SINE MIR 87 249 -13 238 220 0 51 chr2 40073061 40073120 -210614734 + AluS SINE Alu 2 57 -243 1751 128 24 14 chr2 40073366 40073656 -210614198 - AluSx SINE Alu -19 293 1 1031 137 0 20 chr2 40073800 40073953 -210613901 - AluSg/x SINE Alu -37 275 126 2258 76 42 7 chr2 40073954 40074242 -210613612 - AluSx SINE Alu -14 298 1 1008 93 0 56 chr2 40074343 40074504 -210613350 + AluSg/x SINE Alu 157 308 -2 1270 185 112 25 chr2 40074727 40075003 -210612851 - AluJo SINE Alu -12 300 1 354 254 172 65 chr2 40075054 40075166 -210612688 + MIR SINE MIR 20 157 -105 2283 112 0 3 chr2 40075166 40075469 -210612385 - AluSx SINE Alu -10 302 1 354 254 172 65 chr2 40075469 40075525 -210612329 + MIR SINE MIR 157 206 -56 182 274 97 16 chr2 40075689 40075751 -210612103 + L2 LINE L2 3242 3308 -5 21 0 0 0 chr2 40076018 40076039 -210611815 + AT_rich Low_complexity Low_complexity 1 21 0 873 199 0 0 chr2 40076097 40076228 -210611626 + FLAM_A SINE Alu 1 131 -2 2110 105 35 0 chr2 40076245 40076531 -210611323 + AluSg SINE Alu 1 296 -14 2168 123 0 13 chr2 40076572 40076882 -210610972 + AluJb SINE Alu 1 306 -6 968 154 0 0 chr2 40077071 40077220 -210610634 - AluJb SINE Alu -9 303 155 2178 104 3 0 chr2 40077659 40077948 -210609906 + AluSp SINE Alu 1 290 -23 270 81 0 0 chr2 40078226 40078263 -210609591 + (TG)n Simple_repeat Simple_repeat 2 38 0 268 109 0 0 chr2 40078265 40078311 -210609543 - LTR66 LTR ERVL -171 439 394 250 111 0 0 chr2 40078274 40078319 -210609535 + LTR66 LTR ERVL 395 439 -171 * 312 27 0 0 chr2 40078321 40078358 -210609496 + (CA)n Simple_repeat Simple_repeat 2 38 0 1242 56 0 0 chr2 40078932 40079074 -210608780 - AluSq/x SINE Alu -171 142 1 195 100 0 0 chr2 40079192 40079222 -210608632 + (CA)n Simple_repeat Simple_repeat 2 31 0 2296 80 0 10 chr2 40079276 40079577 -210608277 - AluY SINE Alu -13 298 1 2387 105 0 0 chr2 40079579 40079892 -210607962 - AluSq SINE Alu 0 313 1 652 170 107 0 chr2 40080797 40080909 -210606945 - FLAM_A SINE Alu -9 124 1 209 345 130 17 chr2 40081456 40081633 -210606221 - L2 LINE L2 -822 2492 2296 322 337 110 57 chr2 40081768 40082103 -210605751 - L2 LINE L2 -2 3270 2918 201 241 0 0 chr2 40082491 40082545 -210605309 + GA-rich Low_complexity Low_complexity 2 55 0 791 218 19 32 chr2 40082630 40082846 -210605008 + L2 LINE L2 3101 3313 0 309 298 124 54 chr2 40082952 40083378 -210604476 + L1 LINE L1 4943 5398 -748 22 0 0 0 chr2 40083424 40083446 -210604408 + AT_rich Low_complexity Low_complexity 1 22 0 2473 58 7 7 chr2 40085344 40085654 -210602200 + AluY SINE Alu 2 311 0 683 216 111 28 chr2 40085869 40086050 -210601804 + MIR SINE MIR 3 198 -64 246 128 0 0 chr2 40086056 40086095 -210601759 + (CTA)n Simple_repeat Simple_repeat 3 41 0 242 254 45 0 chr2 40086297 40086364 -210601490 - L2 LINE L2 0 3313 3244 2226 117 0 0 chr2 40086426 40086726 -210601128 + AluSx SINE Alu 1 300 -12 301 254 113 132 chr2 40086793 40087104 -210600750 - MLT1L LTR MaLR -92 452 115 2089 121 7 3 chr2 40087248 40087553 -210600301 + AluSq SINE Alu 1 306 -7 482 230 0 0 chr2 40087571 40087658 -210600196 + MER21B LTR ERV1 329 415 -448 627 188 9 9 chr2 40087666 40087778 -210600076 - AluSp/q SINE Alu -13 300 189 1696 109 0 4 chr2 40087913 40088142 -210599712 - AluSp SINE Alu -85 228 1 2130 124 0 10 chr2 40088154 40088461 -210599393 - AluSg SINE Alu -6 304 1 858 168 8 0 chr2 40088467 40088598 -210599256 - FLAM_C SINE Alu 0 133 2 194 200 0 0 chr2 40088703 40088738 -210599116 - MER5A DNA MER1_type 0 189 155 755 239 39 6 chr2 40088827 40089007 -210598847 - MER5A DNA MER1_type 0 189 4 2003 115 35 0 chr2 40089231 40089518 -210598336 + AluSx SINE Alu 1 297 -15 1013 142 7 13 chr2 40090185 40090340 -210597514 - FRAM SINE Alu -13 163 10 1931 127 28 3 chr2 40090351 40090635 -210597219 - AluSg SINE Alu -19 291 1 2325 93 0 7 chr2 40090774 40091076 -210596778 - AluSp SINE Alu -13 300 1 791 269 108 29 chr2 40091119 40091398 -210596456 - AluSx SINE Alu -1 301 1 819 200 30 32 chr2 40091398 40091627 -210596227 - L1M4 LINE L1 -694 5484 5252 1892 95 0 4 chr2 40091627 40091868 -210595986 + AluSc SINE Alu 1 240 -69 819 200 30 32 chr2 40091868 40091938 -210595916 - L1M4 LINE L1 -926 5252 5183 263 28 28 0 chr2 40091938 40091974 -210595880 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1206 190 60 19 chr2 40091977 40092246 -210595608 - AluJo SINE Alu -30 282 3 676 128 154 17 chr2 40092259 40092376 -210595478 - FLAM_C SINE Alu 0 133 1 775 135 0 0 chr2 40092504 40092608 -210595246 + AluSg/x SINE Alu 194 297 -15 213 298 53 0 chr2 40092640 40092697 -210595157 + L2 LINE L2 3180 3239 -33 1784 135 36 4 chr2 40092729 40093010 -210594844 + AluSx SINE Alu 1 290 -22 23 33 0 0 chr2 40093989 40094019 -210593835 + AT_rich Low_complexity Low_complexity 1 30 0 2289 162 26 26 chr2 40094143 40094569 -210593285 + L1MA7 LINE L1 5861 6286 -5 1608 177 0 23 chr2 40094629 40094928 -210592926 + AluJo SINE Alu 1 292 -20 265 371 59 18 chr2 40095003 40095173 -210592681 - L2 LINE L2 -188 3084 2908 204 40 0 0 chr2 40095861 40095886 -210591968 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 296 285 53 18 chr2 40096419 40096532 -210591322 - MIR SINE MIR -87 121 15 2560 46 0 52 chr2 40096552 40096877 -210590977 + AluY SINE Alu 1 308 -3 381 212 24 0 chr2 40097176 40097261 -210590593 + MIR3 SINE MIR 81 167 -41 771 291 62 14 chr2 40097383 40097672 -210590182 - L2 LINE L2 0 3313 3011 210 365 47 28 chr2 40098662 40098769 -210589085 - L2 LINE L2 -10 3262 3154 1369 122 0 0 chr2 40099142 40099331 -210588523 + AluSq SINE Alu 1 189 -124 859 153 31 6 chr2 40099433 40099596 -210588258 + L1PA13 LINE L1 5992 6158 -5 192 111 0 0 chr2 40100248 40100284 -210587570 + (A)n Simple_repeat Simple_repeat 1 36 0 181 321 0 0 chr2 40100420 40100476 -210587378 - L2 LINE L2 -1 3312 3257 2006 131 0 0 chr2 40100554 40100860 -210586994 + AluSx SINE Alu 1 306 0 552 262 120 6 chr2 40101384 40101567 -210586287 + MIR SINE MIR 2 205 -57 839 163 0 23 chr2 40102364 40102493 -210585361 - FLAM_C SINE Alu -7 126 1 2694 144 23 56 chr2 40102672 40103186 -210584668 - L1MB7 LINE L1 -8 6176 5680 260 118 39 0 chr2 40103216 40103267 -210584587 - L1MB7 LINE L1 -479 5699 5647 221 200 147 13 chr2 40103552 40103627 -210584227 + MER5A DNA MER1_type 38 122 -67 485 244 107 124 chr2 40103726 40104378 -210583476 + HAL1 LINE L1 972 1612 -895 1779 155 10 0 chr2 40104421 40104712 -210583142 + AluJb SINE Alu 13 306 -6 823 115 0 58 chr2 40104734 40104873 -210582981 + FLAM_C SINE Alu 11 141 -2 261 0 0 0 chr2 40105189 40105218 -210582636 + (TTTAA)n Simple_repeat Simple_repeat 2 30 0 1201 68 0 6 chr2 40105218 40105369 -210582485 - AluYa5 SINE Alu -8 303 152 210 264 97 0 chr2 40105441 40105513 -210582341 + L2 LINE L2 2937 3015 -257 282 344 92 0 chr2 40105518 40105649 -210582205 + MIR SINE MIR 3 145 -117 1977 140 7 0 chr2 40106092 40106377 -210581477 - AluSq SINE Alu -26 287 1 2223 122 0 0 chr2 40107623 40107917 -210579937 + AluSx SINE Alu 1 294 -18 2088 130 0 20 chr2 40108277 40108578 -210579276 + AluSq SINE Alu 1 295 -18 4546 117 13 30 chr2 40108696 40109195 -210578659 - L1MB1 LINE L1 0 6168 5683 2274 111 3 0 chr2 40109195 40109493 -210578361 - AluSx SINE Alu -13 299 1 4546 117 13 30 chr2 40109493 40109692 -210578162 - L1MB1 LINE L1 -485 5683 5482 23 54 0 0 chr2 40109837 40109874 -210577980 + AT_rich Low_complexity Low_complexity 1 37 0 2149 103 10 3 chr2 40110528 40110818 -210577036 + AluSx SINE Alu 1 292 -20 3020 217 41 35 chr2 40110819 40110842 -210577012 - L1M4 LINE L1 -2564 3582 3561 2325 72 14 0 chr2 40110842 40111132 -210576722 + AluSp SINE Alu 1 294 -19 3020 217 41 35 chr2 40111132 40111513 -210576341 - L1M4 LINE L1 -2585 3561 3184 2257 105 3 0 chr2 40111513 40111808 -210576046 - AluSg SINE Alu -13 297 2 3020 217 41 35 chr2 40111808 40112323 -210575531 - L1M4 LINE L1 -2962 3184 2656 280 79 0 0 chr2 40112556 40112594 -210575260 + HY1 scRNA scRNA 2 39 -73 190 241 19 19 chr2 40112628 40112682 -210575172 - MIR SINE MIR -73 135 82 354 47 0 0 chr2 40112805 40112848 -210575006 + tRNA-Gln-CAG tRNA tRNA 1 43 -32 1789 169 3 7 chr2 40113746 40114042 -210573812 + AluJo SINE Alu 1 295 -17 1604 184 17 10 chr2 40114957 40115256 -210572598 + AluSx SINE Alu 6 306 -6 2337 89 3 0 chr2 40115295 40115588 -210572266 + AluSp SINE Alu 1 294 -19 2234 123 0 0 chr2 40116079 40116379 -210571475 + AluSx SINE Alu 1 300 -12 235 122 24 0 chr2 40116647 40116688 -210571166 + Alu SINE Alu 3 44 -258 937 136 0 8 chr2 40116828 40116960 -210570894 + FLAM_C SINE Alu 1 131 -2 22 0 0 0 chr2 40118665 40118687 -210569167 + AT_rich Low_complexity Low_complexity 1 22 0 2269 106 0 3 chr2 40118693 40118995 -210568859 + AluSx SINE Alu 1 301 -11 254 241 154 56 chr2 40118999 40119125 -210568729 + L1ME4a LINE L1 5292 5439 -2369 2349 99 0 10 chr2 40119125 40119437 -210568417 + AluSg SINE Alu 1 309 -1 254 241 154 56 chr2 40119437 40119472 -210568382 + L1ME4a LINE L1 5439 5469 -2339 1517 174 56 31 chr2 40119475 40119763 -210568091 + AluJb SINE Alu 1 295 -17 947 219 0 12 chr2 40119793 40119962 -210567892 + FAM SINE Alu 1 167 -8 802 185 0 15 chr2 40119965 40120100 -210567754 + AluJo SINE Alu 2 134 -178 634 277 61 17 chr2 40120171 40120484 -210567370 + L1ME4a LINE L1 5513 5897 -224 2486 91 0 0 chr2 40120635 40120942 -210566912 + AluSc SINE Alu 1 307 -2 2122 107 7 0 chr2 40120942 40121231 -210566623 + AluSp SINE Alu 1 291 -22 2320 79 0 0 chr2 40121231 40121521 -210566333 + AluY SINE Alu 1 290 -21 2156 122 3 0 chr2 40121536 40121840 -210566014 + AluSx SINE Alu 3 307 -5 707 346 139 26 chr2 40122681 40123485 -210564369 + L2 LINE L2 1844 2738 -576 1174 268 87 37 chr2 40123801 40124372 -210563482 - L2 LINE L2 -1 3312 2704 2111 140 3 0 chr2 40124372 40124680 -210563174 - AluSx SINE Alu -3 309 1 1174 268 87 37 chr2 40124680 40124822 -210563032 - L2 LINE L2 -609 2704 2571 1907 119 0 0 chr2 40124827 40125088 -210562766 + AluSx SINE Alu 21 281 -31 183 42 0 0 chr2 40125091 40125115 -210562739 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1782 212 3 0 chr2 40125115 40125431 -210562423 + MLT1A1 LTR MaLR 49 365 0 1600 135 101 38 chr2 40125434 40125577 -210562277 + L1MB7 LINE L1 5713 5846 -320 1625 166 63 0 chr2 40125577 40125861 -210561993 + AluJb SINE Alu 1 302 -10 1600 135 101 38 chr2 40125861 40126122 -210561732 + L1MB7 LINE L1 5846 6158 -8 21 0 0 0 chr2 40126597 40126618 -210561236 + AT_rich Low_complexity Low_complexity 1 21 0 234 91 0 0 chr2 40128132 40128165 -210559689 + (T)n Simple_repeat Simple_repeat 1 33 0 1462 147 0 5 chr2 40128186 40128397 -210559457 - AluJo SINE Alu -102 210 1 255 170 0 0 chr2 40128518 40128565 -210559289 + CT-rich Low_complexity Low_complexity 3 49 0 1454 92 5 10 chr2 40130153 40130215 -210557639 - AluSg SINE Alu -116 194 133 2410 67 10 0 chr2 40130215 40130515 -210557339 - AluSp SINE Alu -10 303 1 1454 92 5 10 chr2 40130515 40130647 -210557207 - AluSg SINE Alu -177 133 1 2471 73 7 0 chr2 40130650 40130951 -210556903 - AluSp SINE Alu -10 303 1 180 0 0 0 chr2 40130963 40130983 -210556871 + (T)n Simple_repeat Simple_repeat 1 20 0 2376 89 6 13 chr2 40131025 40131339 -210556515 - AluSp SINE Alu -1 312 1 2187 90 4 0 chr2 40131480 40131757 -210556097 - AluSg SINE Alu -32 278 1 2006 143 0 7 chr2 40133096 40133397 -210554457 + AluSx SINE Alu 1 299 -13 1030 258 54 67 chr2 40133881 40134304 -210553550 - MLT1J LTR MaLR -55 456 3 343 276 0 31 chr2 40134556 40134654 -210553200 - MIR SINE MIR -77 185 91 2039 116 18 0 chr2 40135561 40135870 -210551984 - AluSx SINE Alu 0 314 1 442 246 58 22 chr2 40135986 40136124 -210551730 - MIR SINE MIR -82 180 38 2265 113 0 0 chr2 40136346 40136646 -210551208 - AluSg SINE Alu -10 300 1 225 288 171 40 chr2 40137172 40137394 -210550460 - L2 LINE L2 -185 3087 2837 2313 102 0 0 chr2 40137844 40138139 -210549715 - AluSq SINE Alu -18 295 1 202 143 24 0 chr2 40138568 40138610 -210549244 + T-rich Low_complexity Low_complexity 3 45 0 195 245 0 0 chr2 40139086 40139135 -210548719 - L2 LINE L2 -3 3269 3221 440 284 16 0 chr2 40139217 40139344 -210548510 + MIR SINE MIR 124 252 -10 1219 156 0 82 chr2 40139417 40139648 -210548206 + AluJo SINE Alu 85 296 -16 796 282 136 40 chr2 40139649 40140139 -210547715 + L2 LINE L2 2713 3270 -43 698 103 33 48 chr2 40140161 40140412 -210547442 + GA-rich Low_complexity Low_complexity 1 247 0 359 277 85 0 chr2 40140539 40140669 -210547185 - L2 LINE L2 -1210 2104 1964 1454 223 103 65 chr2 40140987 40141158 -210546696 + MLT1F LTR MaLR 1 164 -378 2044 128 30 0 chr2 40141158 40141462 -210546392 + AluSq SINE Alu 1 313 0 1454 223 103 65 chr2 40141462 40141784 -210546070 + MLT1F LTR MaLR 164 513 -29 23 0 0 0 chr2 40142379 40142402 -210545452 + AT_rich Low_complexity Low_complexity 1 23 0 2146 94 13 26 chr2 40142406 40142714 -210545140 + AluSx SINE Alu 1 304 -8 473 128 26 0 chr2 40143823 40143901 -210543953 - MER116 DNA Mariner 0 80 1 1723 175 16 3 chr2 40144191 40144494 -210543360 + AluJo SINE Alu 5 311 -1 207 0 0 0 chr2 40145218 40145241 -210542613 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 2365 93 3 0 chr2 40145384 40145684 -210542170 - AluSg SINE Alu -9 301 1 625 261 74 39 chr2 40146646 40146849 -210541005 + MIR SINE MIR 50 259 -3 2288 119 0 0 chr2 40147107 40147419 -210540435 - AluSx SINE Alu 0 312 1 802 264 67 31 chr2 40149666 40150022 -210537832 - L1ME4a LINE L1 -137 5984 5616 706 208 23 8 chr2 40150883 40151013 -210536841 + FLAM_C SINE Alu 1 132 -1 246 167 0 0 chr2 40151102 40151138 -210536716 - U2 snRNA snRNA -152 36 1 452 227 150 72 chr2 40151191 40151223 -210536631 + MIR SINE MIR 40 68 -194 1836 144 26 10 chr2 40151223 40151529 -210536325 - AluJo SINE Alu -1 311 1 452 227 150 72 chr2 40151529 40151703 -210536151 + MIR SINE MIR 68 262 0 1750 171 7 0 chr2 40151703 40151990 -210535864 + AluSx SINE Alu 1 289 -23 330 333 88 10 chr2 40152131 40152323 -210535531 + L2 LINE L2 2071 2277 -1037 249 352 9 19 chr2 40152463 40152568 -210535286 + MER5B DNA MER1_type 1 104 -74 1306 166 14 0 chr2 40152642 40152865 -210534989 - AluJo SINE Alu 0 312 87 187 43 0 0 chr2 40153181 40153204 -210534650 + (T)n Simple_repeat Simple_repeat 1 180 0 2843 26 0 0 chr2 40153204 40153515 -210534339 - AluY SINE Alu 0 334 1 2183 106 0 3 chr2 40153529 40153822 -210534032 - AluSq SINE Alu -21 292 1 2744 135 17 43 chr2 40153823 40154283 -210533571 - LTR26 LTR ERV1 -155 448 1 1329 83 0 0 chr2 40154491 40154660 -210533194 - AluSc SINE Alu -3 306 138 541 104 13 0 chr2 40154661 40154738 -210533116 - AluS SINE Alu -234 79 2 255 179 0 0 chr2 40154802 40154841 -210533013 - Alu SINE Alu -259 41 3 2132 133 3 0 chr2 40155004 40155304 -210532550 - AluSx SINE Alu -11 301 1 224 219 375 0 chr2 40155584 40155712 -210532142 + MIR SINE MIR 86 261 -1 180 275 144 38 chr2 40156099 40156259 -210531595 - MIR3 SINE MIR -16 192 16 21 0 0 0 chr2 40156952 40156973 -210530881 + GC_rich Low_complexity Low_complexity 1 21 0 1224 155 11 114 chr2 40157691 40157785 -210530069 - MER8 DNA MER2_type -1 238 136 2692 46 0 0 chr2 40157785 40158092 -210529762 + AluY SINE Alu 1 307 -4 1224 155 11 114 chr2 40158092 40158108 -210529746 - MER8 DNA MER2_type -103 136 120 1958 154 7 3 chr2 40158108 40158413 -210529441 + AluJo SINE Alu 6 311 -1 1224 155 11 114 chr2 40158413 40158565 -210529289 - MER8 DNA MER2_type -119 120 2 642 228 251 4 chr2 40158569 40158832 -210529022 + L2 LINE L2 2986 3313 0 420 273 68 30 chr2 40158880 40159012 -210528842 - L2 LINE L2 -2 3270 3134 2899 223 57 58 chr2 40159081 40159202 -210528652 - L1M4c LINE L1 -3278 3104 2984 2361 88 0 10 chr2 40159202 40159499 -210528355 + AluSx SINE Alu 1 294 -18 2899 223 57 58 chr2 40159499 40160306 -210527548 - L1M4c LINE L1 -3398 2984 2175 1927 168 48 41 chr2 40160306 40160484 -210527370 + MSTD LTR MaLR 1 176 -220 2115 93 27 27 chr2 40160484 40160784 -210527070 + AluY SINE Alu 1 300 -11 1927 168 48 41 chr2 40160784 40160998 -210526856 + MSTD LTR MaLR 176 396 0 2899 223 57 58 chr2 40160998 40161577 -210526277 - L1M4c LINE L1 -4207 2175 1597 2211 79 0 7 chr2 40161581 40161860 -210525994 - AluY SINE Alu 0 311 35 225 321 71 0 chr2 40162265 40162349 -210525505 - MIR3 SINE MIR -42 166 77 24 32 0 0 chr2 40162634 40162665 -210525189 + AT_rich Low_complexity Low_complexity 1 31 0 271 192 0 0 chr2 40162715 40162767 -210525087 - HAL1 LINE L1 -120 2387 2336 1738 155 7 17 chr2 40162854 40163151 -210524703 + AluJo SINE Alu 1 294 -18 1695 204 90 43 chr2 40163178 40163582 -210524272 - L1ME3 LINE L1 -3 6159 5776 2076 137 0 3 chr2 40163582 40163874 -210523980 - AluSx SINE Alu -21 291 1 1695 204 90 43 chr2 40163874 40164260 -210523594 - L1ME3 LINE L1 -386 5776 5323 992 178 0 18 chr2 40164262 40164425 -210523429 - AluJb SINE Alu -23 289 130 923 247 59 7 chr2 40164439 40164726 -210523128 - L1ME3 LINE L1 -1029 5117 4816 446 180 34 0 chr2 40164752 40164841 -210523013 - L1ME3 LINE L1 -1587 4559 4468 642 203 0 8 chr2 40164905 40165028 -210522826 - FLAM_A SINE Alu -11 122 1 450 184 56 101 chr2 40165076 40165255 -210522599 - HAL1 LINE L1 -648 1859 1689 2242 180 78 118 chr2 40165260 40165983 -210521871 - LTR8A LTR ERV1 0 727 34 2253 259 89 90 chr2 40165989 40166141 -210521713 - HAL1 LINE L1 -882 1625 1474 2262 109 3 0 chr2 40166141 40166445 -210521409 - AluSg SINE Alu -5 305 1 2253 259 89 90 chr2 40166445 40166761 -210521093 - HAL1 LINE L1 -1033 1474 1159 2065 114 23 10 chr2 40166761 40167060 -210520794 - AluSc SINE Alu -6 303 1 2253 259 89 90 chr2 40167060 40167534 -210520320 - HAL1 LINE L1 -1348 1159 686 2297 109 0 0 chr2 40167534 40167828 -210520026 - AluSx SINE Alu -18 294 1 2253 259 89 90 chr2 40167828 40168463 -210519391 - HAL1 LINE L1 -1821 686 48 1337 205 92 52 chr2 40168773 40169154 -210518700 - MSTD LTR MaLR 0 396 1 225 0 0 0 chr2 40169477 40169502 -210518352 + (TG)n Simple_repeat Simple_repeat 1 25 0 277 314 145 8 chr2 40170448 40170572 -210517282 - MIR SINE MIR -115 147 7 2212 141 0 0 chr2 40171221 40171526 -210516328 - AluSx SINE Alu -7 305 1 978 151 13 113 chr2 40171986 40172224 -210515630 - AluJo SINE Alu -13 299 86 449 161 11 0 chr2 40173122 40173209 -210514645 + GA-rich Low_complexity Low_complexity 4 91 0 2760 120 11 25 chr2 40174265 40174699 -210513155 - MSTA LTR MaLR 0 428 1 1976 101 31 0 chr2 40175035 40175327 -210512527 - AluSx SINE Alu 0 317 18 331 237 62 98 chr2 40175797 40175991 -210511863 - MIR3 SINE MIR 0 208 22 440 253 0 6 chr2 40176057 40176085 -210511769 + (TA)n Simple_repeat Simple_repeat 1 28 -141 796 172 0 30 chr2 40176085 40176219 -210511635 + FLAM_C SINE Alu 1 130 -3 440 253 0 6 chr2 40176219 40176360 -210511494 + (TA)n Simple_repeat Simple_repeat 28 169 0 842 224 38 61 chr2 40176495 40176759 -210511095 - MER102a DNA MER1_type 0 330 73 2150 100 3 7 chr2 40177304 40177594 -210510260 - AluY SINE Alu -17 294 6 2392 100 0 0 chr2 40179234 40179534 -210508320 - AluSx SINE Alu -12 300 1 1085 126 0 60 chr2 40180082 40180264 -210507590 - AluJb SINE Alu -5 307 137 198 0 0 0 chr2 40180264 40180286 -210507568 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2156 73 26 0 chr2 40180289 40180561 -210507293 - AluY SINE Alu -24 287 9 466 280 28 7 chr2 40180630 40180773 -210507081 - MIR SINE MIR -70 192 47 681 304 29 0 chr2 40180822 40181026 -210506828 + MIR SINE MIR 47 256 -6 578 235 122 25 chr2 40181976 40182172 -210505682 - L2 LINE L2 -1 3312 3098 1317 86 145 0 chr2 40183309 40183495 -210504359 - AluSq SINE Alu -15 298 86 935 70 0 0 chr2 40183495 40183610 -210504244 - AluSq/x SINE Alu -163 150 36 358 168 131 9 chr2 40183913 40184020 -210503834 - L1MC5 LINE L1 -35 7926 7807 27 62 0 0 chr2 40185121 40185169 -210502685 + GC_rich Low_complexity Low_complexity 1 48 0 462 318 128 39 chr2 40186191 40186496 -210501358 - L2 LINE L2 0 3272 2941 2258 88 0 32 chr2 40187319 40187627 -210500227 + AluY SINE Alu 1 298 -13 222 346 0 0 chr2 40187688 40187766 -210500088 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 506 200 147 27 chr2 40187989 40188139 -210499715 + MIR SINE MIR 19 186 -76 364 125 159 23 chr2 40188268 40188356 -210499498 + MER5A DNA MER1_type 7 106 -83 3588 86 4 2 chr2 40188421 40188885 -210498969 - Charlie3 DNA MER1_type -4 2706 2242 * 3745 92 24 10 chr2 40188879 40189371 -210498483 - Charlie3 DNA MER1_type -2210 500 2 434 272 48 0 chr2 40189410 40189535 -210498319 - MER5A DNA MER1_type -58 131 1 2025 107 3 14 chr2 40192174 40192465 -210495389 - AluSx SINE Alu -24 288 1 252 0 0 0 chr2 40192522 40192550 -210495304 + (T)n Simple_repeat Simple_repeat 1 28 0 350 286 265 0 chr2 40192706 40192940 -210494914 + L3 LINE CR1 1269 1564 -13 299 160 0 0 chr2 40195307 40195357 -210492497 + L2 LINE L2 3261 3310 -3 276 53 0 0 chr2 40198497 40198535 -210489319 + (TA)n Simple_repeat Simple_repeat 2 39 0 286 239 85 31 chr2 40200680 40200810 -210487044 + L2 LINE L2 3159 3295 -18 1399 167 31 0 chr2 40201037 40201264 -210486590 - AluJo SINE Alu -75 237 4 365 204 0 61 chr2 40201766 40201864 -210485990 + MER5A DNA MER1_type 42 133 -56 861 97 17 4 chr2 40201865 40201999 -210485855 - L1PA15 LINE L1 -9 6159 6020 2226 208 122 126 chr2 40203086 40203538 -210484316 + L2 LINE L2 1610 2063 -1250 955 134 12 47 chr2 40203538 40203710 -210484144 - FAM SINE Alu 0 49 1 2226 208 122 126 chr2 40203710 40204799 -210483055 + L2 LINE L2 2063 3313 0 307 297 127 0 chr2 40204978 40205096 -210482758 - MIR SINE MIR -5 257 125 336 306 81 0 chr2 40205558 40205669 -210482185 + MIR3 SINE MIR 81 200 -8 1226 181 0 5 chr2 40211058 40211268 -210476586 - AluJo SINE Alu -19 293 85 548 231 135 6 chr2 40215591 40215747 -210472107 - MER5B DNA MER1_type -1 177 2 591 188 14 62 chr2 40217546 40217690 -210470164 + FLAM_C SINE Alu 6 142 -1 1908 156 0 3 chr2 40217752 40218047 -210469807 - AluJo SINE Alu -18 294 1 277 296 82 10 chr2 40218242 40218340 -210469514 - MIR SINE MIR -142 120 16 21 0 0 0 chr2 40218551 40218572 -210469282 + AT_rich Low_complexity Low_complexity 1 21 0 1492 147 83 7 chr2 40218607 40218907 -210468947 + MER33 DNA MER1_type 2 324 0 1105 171 118 0 chr2 40219121 40219332 -210468522 - MER46A DNA MER2_type 0 236 1 1981 108 7 24 chr2 40220678 40220975 -210466879 - AluSx SINE Alu -19 293 2 24 32 0 0 chr2 40221642 40221673 -210466181 + AT_rich Low_complexity Low_complexity 1 31 0 294 98 20 20 chr2 40222206 40222257 -210465597 + L1MDa LINE L1 1800 1850 -4690 27 0 0 0 chr2 40222817 40222844 -210465010 + AT_rich Low_complexity Low_complexity 1 27 0 2208 87 0 4 chr2 40222854 40223130 -210464724 - AluSx SINE Alu -30 282 8 578 210 114 30 chr2 40223141 40223308 -210464546 + MIR SINE MIR 82 262 0 354 305 115 32 chr2 40224468 40224747 -210463107 - L2 LINE L2 -596 2718 2417 276 177 65 16 chr2 40224847 40224909 -210462945 - Charlie7 DNA MER1_type 0 2612 2548 336 196 78 10 chr2 40224986 40225088 -210462766 - Charlie7 DNA MER1_type -2468 144 36 263 342 29 96 chr2 40225148 40225420 -210462434 + L2 LINE L2 3018 3271 -1 1842 158 0 14 chr2 40225658 40225949 -210461905 - AluSx SINE Alu -25 287 1 2196 82 10 30 chr2 40226621 40226924 -210460930 + AluSq SINE Alu 1 297 -16 295 300 91 0 chr2 40227112 40227222 -210460632 + L2 LINE L2 3153 3272 0 1815 167 0 7 chr2 40227369 40227668 -210460186 + AluJb SINE Alu 1 297 -15 1000 179 27 49 chr2 40228413 40228637 -210459217 - MER20 DNA MER1_type 0 219 1 2216 68 44 17 chr2 40228720 40229015 -210458839 + AluY SINE Alu 1 303 -8 256 271 103 65 chr2 40229345 40229607 -210458247 + L1ME4a LINE L1 5354 5625 -496 478 188 0 12 chr2 40229612 40229692 -210458162 - MER44D DNA MER2_type -1 604 526 216 97 0 0 chr2 40229692 40229723 -210458131 + (CATA)n Simple_repeat Simple_repeat 2 32 0 646 143 130 2 chr2 40229725 40229883 -210457971 - MER44D DNA MER2_type -122 483 1 401 272 99 9 chr2 40229884 40230116 -210457738 + L1ME4a LINE L1 5628 5880 -241 21 71 0 0 chr2 40231528 40231570 -210456284 + AT_rich Low_complexity Low_complexity 1 42 0 365 43 0 0 chr2 40232266 40232313 -210455541 - MADE1 DNA Mariner -33 47 1 2420 266 141 35 chr2 40232337 40232395 -210455459 + L1M4b LINE L1 11 61 -6798 288 111 0 0 chr2 40232395 40232440 -210455414 + (CA)n Simple_repeat Simple_repeat 2 46 0 2420 266 141 35 chr2 40232440 40233356 -210454498 + L1M4b LINE L1 61 1088 -5771 1526 199 8 63 chr2 40233402 40233870 -210453984 + L1M4b LINE L1 1290 1733 -5122 654 233 75 75 chr2 40233878 40234213 -210453641 + L1M4b LINE L1 2366 2700 -4438 374 269 47 103 chr2 40234298 40234618 -210453236 + L1M4b LINE L1 2617 2918 -4041 2251 122 0 0 chr2 40234620 40234931 -210452923 + AluSx SINE Alu 1 311 -1 979 188 18 0 chr2 40234938 40235108 -210452746 + AluSg/x SINE Alu 130 302 -10 2242 106 0 16 chr2 40235471 40235783 -210452071 - AluSq SINE Alu -6 307 1 684 240 73 34 chr2 40236284 40236488 -210451366 - MIR SINE MIR -3 259 48 260 298 64 11 chr2 40236567 40236661 -210451193 - MIR SINE MIR -28 234 136 43 35 0 0 chr2 40236944 40237001 -210450853 + AT_rich Low_complexity Low_complexity 1 57 0 517 339 32 21 chr2 40237509 40237698 -210450156 - MIR3 SINE MIR 0 208 18 28 0 0 0 chr2 40238743 40238771 -210449083 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr2 40239303 40239343 -210448511 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr2 40240389 40240413 -210447441 + (T)n Simple_repeat Simple_repeat 1 24 0 311 304 27 27 chr2 40241690 40241802 -210446052 - MIR SINE MIR -76 132 21 24 0 0 0 chr2 40244319 40244343 -210443511 + AT_rich Low_complexity Low_complexity 1 24 0 220 386 44 0 chr2 40244669 40244783 -210443071 + MIR3 SINE MIR 37 155 -53 21 57 0 0 chr2 40245543 40245578 -210442276 + AT_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr2 40246112 40246134 -210441720 + (A)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr2 40246770 40246795 -210441059 + AT_rich Low_complexity Low_complexity 1 25 0 181 326 186 23 chr2 40246880 40246966 -210440888 + MIR3 SINE MIR 55 154 -54 369 241 79 65 chr2 40249195 40249336 -210438518 + MIR SINE MIR 38 178 -62 491 191 0 0 chr2 40249709 40249793 -210438061 + AluJ/FLAM SINE Alu 1 84 -228 22 35 0 0 chr2 40249800 40249829 -210438025 + AT_rich Low_complexity Low_complexity 1 29 0 1931 144 0 32 chr2 40249933 40250246 -210437608 - AluSx SINE Alu -9 303 1 2419 88 0 0 chr2 40250661 40250969 -210436885 + AluSg SINE Alu 1 308 -2 1093 92 61 0 chr2 40251350 40251513 -210436341 + MER30 DNA MER1_type 1 173 -57 1925 108 76 7 chr2 40252417 40252694 -210435160 - AluSg SINE Alu -14 296 1 21 0 0 0 chr2 40253375 40253396 -210434458 + AT_rich Low_complexity Low_complexity 1 21 0 1859 163 10 3 chr2 40253930 40254237 -210433617 + AluJb SINE Alu 1 309 -3 1657 180 20 16 chr2 40254473 40254779 -210433075 + AluJo SINE Alu 3 309 -3 204 97 0 0 chr2 40254816 40254847 -210433007 + (A)n Simple_repeat Simple_repeat 1 31 0 1722 180 3 20 chr2 40254868 40255162 -210432692 + AluJo SINE Alu 1 289 -23 1847 199 16 59 chr2 40255274 40255762 -210432092 + MLT1C LTR MaLR 1 467 0 1891 134 22 0 chr2 40256034 40256337 -210431517 + AluSx SINE Alu 1 309 0 1648 154 60 6 chr2 40256592 40256924 -210430930 - L1MA8 LINE L1 0 6291 5942 296 314 132 0 chr2 40257088 40257209 -210430645 - L2 LINE L2 0 3272 3136 1822 115 4 19 chr2 40257267 40257528 -210430326 + AluSx SINE Alu 3 259 -53 1076 133 0 0 chr2 40257648 40257806 -210430048 - AluSp SINE Alu -4 309 152 1817 157 7 10 chr2 40258123 40258422 -210429432 - AluJo SINE Alu -13 299 2 243 167 0 0 chr2 40259546 40259612 -210428242 + A-rich Low_complexity Low_complexity 1 66 0 1655 146 0 79 chr2 40260940 40261159 -210426695 - AluJb SINE Alu -21 291 103 2458 53 0 7 chr2 40261159 40261461 -210426393 - AluY SINE Alu -11 300 1 1655 146 0 79 chr2 40261461 40261557 -210426297 - AluJb SINE Alu -209 103 1 198 303 49 74 chr2 40261575 40261697 -210426157 + MIR3 SINE MIR 8 126 -82 244 223 91 22 chr2 40262033 40262139 -210425715 - L1MC/D LINE L1 -360 5804 5691 907 151 102 38 chr2 40262149 40262335 -210425519 + Tigger1 DNA MER2_type 1 198 -2220 7846 116 45 14 chr2 40262337 40263040 -210424814 + Tigger1 DNA MER2_type 1125 1884 -534 2445 75 0 0 chr2 40263040 40263335 -210424519 + AluSc SINE Alu 1 295 -14 7846 116 45 14 chr2 40263335 40263887 -210423967 + Tigger1 DNA MER2_type 1884 2418 0 585 250 62 40 chr2 40263952 40264228 -210423626 - L1MC/D LINE L1 -588 5574 5293 1693 177 16 31 chr2 40264233 40264589 -210423265 - L1MB8 LINE L1 -1 6177 5826 2466 64 0 19 chr2 40264589 40264903 -210422951 - AluY SINE Alu -3 308 1 1693 177 16 31 chr2 40264903 40264931 -210422923 - L1MB8 LINE L1 -352 5826 5799 3590 149 43 34 chr2 40264931 40265656 -210422198 - L1MB4 LINE L1 0 6180 5428 1153 186 10 0 chr2 40265658 40265857 -210421997 - AluJo SINE Alu -25 287 87 1659 154 87 4 chr2 40265857 40266306 -210421548 - L1MB4 LINE L1 -743 5403 4941 813 277 140 67 chr2 40266322 40266978 -210420876 - L1MC/D LINE L1 -960 5186 4579 2172 109 0 3 chr2 40266978 40267289 -210420565 - AluSg SINE Alu 0 310 1 813 277 140 67 chr2 40267289 40267820 -210420034 - L1MC/D LINE L1 -1567 4579 3912 1206 177 72 35 chr2 40268123 40268480 -210419374 - MSTC LTR MaLR -12 416 1 1500 160 21 0 chr2 40268661 40268898 -210418956 + AluSx SINE Alu 1 242 -70 318 347 72 0 chr2 40268939 40269106 -210418748 - L1MC/D LINE L1 -2968 3178 3000 268 204 0 19 chr2 40269107 40269161 -210418693 + MSTC LTR MaLR 23 75 -353 1202 180 0 84 chr2 40269164 40269425 -210418429 - MER8 DNA MER2_type 0 239 1 198 167 0 0 chr2 40269428 40269464 -210418390 + (CA)n Simple_repeat Simple_repeat 2 37 0 1111 171 90 66 chr2 40269467 40269801 -210418053 + MER2 DNA MER2_type 3 344 0 366 23 0 0 chr2 40269814 40269857 -210417997 + (GA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 40269856 40269886 -210417968 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 455 291 68 29 chr2 40269896 40270281 -210417573 - L1MC/D LINE L1 -3525 2621 2212 2146 115 3 16 chr2 40270281 40270594 -210417260 - AluSg SINE Alu -1 309 1 455 291 68 29 chr2 40270594 40270690 -210417164 - L1MC/D LINE L1 -3934 2212 2121 26 0 0 0 chr2 40271041 40271067 -210416787 + AT_rich Low_complexity Low_complexity 1 26 0 2242 90 10 0 chr2 40271078 40271378 -210416476 - AluSx SINE Alu -4 308 6 1354 207 242 22 chr2 40271588 40272182 -210415672 - L1ME3 LINE L1 -47 6115 5315 1867 155 16 10 chr2 40272246 40272549 -210415305 - AluSx SINE Alu -7 305 1 874 268 15 7 chr2 40272549 40272814 -210415040 - L1ME3 LINE L1 -861 5285 5016 576 289 87 47 chr2 40272811 40272980 -210414874 - L1MEd LINE L1 -880 1610 1449 * 2088 139 0 3 chr2 40272980 40273283 -210414571 - AluSx SINE Alu -10 302 1 576 289 87 47 chr2 40273283 40273517 -210414337 - L1MEd LINE L1 -1041 1449 1226 2191 92 21 0 chr2 40273517 40273799 -210414055 - AluSx SINE Alu -24 288 1 576 289 87 47 chr2 40273799 40274029 -210413825 - L1MEd LINE L1 -1264 1226 859 636 266 33 55 chr2 40274992 40275075 -210412779 - MIR SINE MIR -16 246 163 1170 134 129 0 chr2 40275075 40275284 -210412570 - MER46A DNA MER2_type 0 236 1 636 266 33 55 chr2 40275284 40275442 -210412412 - MIR SINE MIR -99 163 7 1515 166 67 24 chr2 40276073 40276446 -210411408 - Charlie1 DNA MER1_type 0 2761 2373 1007 120 43 128 chr2 40276460 40276718 -210411136 - L1MB7 LINE L1 -16 6168 5933 564 167 0 28 chr2 40276718 40276826 -210411028 - Charlie1 DNA MER1_type -432 2329 2225 2951 198 55 47 chr2 40276897 40277452 -210410402 - L1ME1 LINE L1 -9 6157 5593 2260 98 0 0 chr2 40277452 40277747 -210410107 + AluSx SINE Alu 1 295 -17 2951 198 55 47 chr2 40277747 40277978 -210409876 - L1ME1 LINE L1 -573 5593 5365 505 214 0 17 chr2 40278027 40278144 -210409710 - L1MB8 LINE L1 0 6178 6064 281 338 59 37 chr2 40278463 40278509 -210409345 + L2 LINE L2 3128 3172 -100 2628 37 0 0 chr2 40278509 40278807 -210409047 - AluY SINE Alu -12 299 2 281 338 59 37 chr2 40278807 40278896 -210408958 + L2 LINE L2 3172 3266 -6 337 328 90 21 chr2 40280358 40280547 -210407307 + MIR SINE MIR 12 213 -49 2172 99 44 7 chr2 40280729 40281022 -210406832 + AluSg SINE Alu 1 304 -6 356 273 0 30 chr2 40282468 40282567 -210405287 + MIR SINE MIR 59 154 -108 643 218 68 68 chr2 40284837 40284999 -210402855 + MER112 DNA MER1_type 3 167 -93 2105 130 7 0 chr2 40284999 40285306 -210402548 - AluSx SINE Alu -3 309 1 643 218 68 68 chr2 40285306 40285395 -210402459 + MER112 DNA MER1_type 166 254 -6 189 0 0 0 chr2 40285831 40285852 -210402002 + (A)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr2 40285909 40285938 -210401916 + AT_rich Low_complexity Low_complexity 1 29 0 1762 174 3 19 chr2 40285959 40286269 -210401585 - AluJo SINE Alu -7 305 1 2274 118 0 6 chr2 40286717 40287031 -210400823 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 40287434 40287455 -210400399 + AT_rich Low_complexity Low_complexity 1 21 0 442 154 15 0 chr2 40287580 40287645 -210400209 - MER2 DNA MER2_type 0 345 280 27 29 0 0 chr2 40287645 40287679 -210400175 + AT_rich Low_complexity Low_complexity 1 34 0 998 156 0 13 chr2 40287709 40287863 -210399991 - FRAM SINE Alu -19 157 6 1065 158 0 16 chr2 40287868 40288051 -210399803 - MER2 DNA MER2_type -164 181 2 1674 164 29 32 chr2 40288407 40288718 -210399136 - AluJb SINE Alu -2 310 1 691 167 54 18 chr2 40288733 40288901 -210398953 - L1MA8 LINE L1 -7 6284 6111 508 117 26 0 chr2 40288909 40288986 -210398868 - MLT1A1 LTR MaLR -286 79 1 514 172 66 73 chr2 40289100 40289251 -210398603 - L1MA8 LINE L1 -173 6118 5969 2062 125 3 32 chr2 40289324 40289637 -210398217 - AluSx SINE Alu -6 306 3 478 143 26 0 chr2 40289842 40289919 -210397935 + MLT1A1 LTR MaLR 1 79 -286 346 250 113 0 chr2 40290266 40290346 -210397508 + MIR SINE MIR 37 125 -137 581 231 54 8 chr2 40290349 40290479 -210397375 - L2 LINE L2 -2 3311 3176 320 188 72 0 chr2 40291573 40291642 -210396212 - MER46A DNA MER2_type -90 146 73 1444 168 0 13 chr2 40291657 40291895 -210395959 - AluJb SINE Alu -77 235 1 939 161 78 22 chr2 40291895 40292075 -210395779 + MER46A DNA MER2_type 47 236 0 2200 106 0 0 chr2 40292418 40292711 -210395143 + AluSx SINE Alu 1 293 -19 195 284 25 37 chr2 40293068 40293149 -210394705 + L2 LINE L2 3174 3253 -19 21 0 0 0 chr2 40293270 40293291 -210394563 + AT_rich Low_complexity Low_complexity 1 21 0 1227 194 0 103 chr2 40293647 40293976 -210393878 + AluJo SINE Alu 3 297 -15 200 244 0 0 chr2 40294007 40294048 -210393806 + (TA)n Simple_repeat Simple_repeat 2 42 0 2267 101 0 0 chr2 40294133 40294429 -210393425 - AluSx SINE Alu -16 296 1 214 196 130 0 chr2 40294454 40294500 -210393354 - MIR SINE MIR -121 141 90 180 369 68 19 chr2 40294568 40294671 -210393183 - MIR3 SINE MIR -99 109 2 263 307 160 31 chr2 40294915 40295234 -210392620 + L2 LINE L2 1986 2345 -969 266 319 14 0 chr2 40295382 40295451 -210392403 - L3 LINE CR1 -1 1576 1507 2154 111 0 17 chr2 40295451 40295749 -210392105 - AluSx SINE Alu -19 293 1 310 333 72 0 chr2 40296617 40296728 -210391126 - L2 LINE L2 -2 3311 3193 292 40 140 0 chr2 40297879 40297929 -210389925 - MADE1 DNA Mariner -23 57 1 2201 121 0 0 chr2 40298649 40298955 -210388899 + AluSx SINE Alu 1 306 -6 818 120 96 0 chr2 40298956 40299081 -210388773 + AluSg/x SINE Alu 82 218 -94 2315 105 3 0 chr2 40299167 40299473 -210388381 + AluSp SINE Alu 1 307 -6 194 325 103 8 chr2 40299862 40299979 -210387875 - L2 LINE L2 -876 2438 2311 571 246 0 0 chr2 40300109 40300223 -210387631 + FLAM_A SINE Alu 6 119 -23 394 259 108 25 chr2 40300242 40300558 -210387296 + L1ME3A LINE L1 3174 3515 -2631 1421 241 97 52 chr2 40300663 40300709 -210387145 + L1ME3A LINE L1 3713 3755 -2391 1566 187 42 3 chr2 40300709 40300993 -210386861 + AluJb SINE Alu 1 295 -17 1421 241 97 52 chr2 40300993 40301642 -210386212 + L1ME3A LINE L1 3755 4447 -1699 1832 138 81 0 chr2 40301642 40301925 -210385929 + AluSx SINE Alu 1 306 -6 1421 241 97 52 chr2 40301925 40301983 -210385871 + L1ME3A LINE L1 4447 4501 -1645 685 276 113 48 chr2 40302001 40303031 -210384823 + L1ME3A LINE L1 4540 5647 -515 1670 170 56 25 chr2 40303037 40303360 -210384494 + MER1B DNA MER1_type 2 334 -5 2343 97 0 7 chr2 40303361 40303669 -210384185 + AluSc SINE Alu 1 306 -3 375 281 22 5 chr2 40303737 40303922 -210383932 + L1ME3A LINE L1 5770 5957 -213 2523 79 0 0 chr2 40304069 40304374 -210383480 - AluSg SINE Alu -5 305 1 485 121 0 60 chr2 40304439 40304522 -210383332 - MER1A DNA MER1_type 0 529 452 3613 107 25 4 chr2 40304536 40305052 -210382802 - MER1A DNA MER1_type 0 527 1 1381 153 120 29 chr2 40305485 40305760 -210382094 + AluJo SINE Alu 1 300 -12 1941 139 7 3 chr2 40305819 40306122 -210381732 + AluSx SINE Alu 1 304 -8 2059 112 31 0 chr2 40306125 40306411 -210381443 + AluSx SINE Alu 2 296 -16 26 50 0 0 chr2 40306420 40306460 -210381394 + AT_rich Low_complexity Low_complexity 1 40 0 1849 99 48 4 chr2 40306505 40306777 -210381077 - L1MA2 LINE L1 -7 6297 6014 263 257 95 0 chr2 40306887 40306961 -210380893 - L2 LINE L2 -37 3276 3196 682 133 29 9 chr2 40307171 40307276 -210380578 + U6 snRNA snRNA 1 107 0 2459 174 45 13 chr2 40307348 40307795 -210380059 - MER65C LTR ERV1 0 461 1 594 262 162 35 chr2 40308186 40308430 -210379424 + L1ME4a LINE L1 5508 5720 -401 2593 111 40 8 chr2 40308430 40308808 -210379046 + MLT1B LTR MaLR 1 390 0 594 262 162 35 chr2 40308808 40308964 -210378890 + L1ME4a LINE L1 5720 5959 -162 36 0 0 0 chr2 40309190 40309226 -210378628 + AT_rich Low_complexity Low_complexity 1 36 0 1776 166 3 7 chr2 40309620 40309922 -210377932 - AluJo SINE Alu -3 309 9 229 263 62 25 chr2 40310408 40310488 -210377366 - L2 LINE L2 -69 3203 3121 259 356 29 0 chr2 40310531 40310635 -210377219 + MIR SINE MIR 9 115 -147 333 269 53 76 chr2 40310910 40311081 -210376773 - L2 LINE L2 -870 2444 2278 2256 108 0 3 chr2 40311399 40311694 -210376160 - AluSx SINE Alu -16 296 3 267 308 99 16 chr2 40312123 40312254 -210375600 + MIR SINE MIR 66 218 -44 1619 159 33 33 chr2 40312254 40312555 -210375299 - AluJb SINE Alu -11 301 1 267 308 99 16 chr2 40312555 40312605 -210375249 + MIR SINE MIR 218 262 0 340 250 43 86 chr2 40312770 40312886 -210374968 - MER5A DNA MER1_type 0 189 79 3902 168 57 22 chr2 40312901 40313657 -210374197 - L1MB3 LINE L1 0 6183 5402 1961 139 9 22 chr2 40313824 40314141 -210373713 + AluSq SINE Alu 1 313 0 673 165 0 8 chr2 40314141 40314262 -210373592 + L1MD3 LINE L1 6914 7033 -962 2049 134 0 42 chr2 40314426 40314739 -210373115 + AluSx SINE Alu 1 300 -12 2147 113 0 0 chr2 40314995 40315309 -210372545 + AluSx SINE Alu 1 314 0 241 276 0 147 chr2 40315401 40315449 -210372405 - MER5A DNA MER1_type -80 109 86 2181 133 0 0 chr2 40315449 40315750 -210372104 - AluSx SINE Alu -11 301 1 241 276 0 147 chr2 40315750 40315817 -210372037 - MER5A DNA MER1_type -103 86 11 500 293 210 12 chr2 40316137 40316475 -210371379 + L2 LINE L2 1647 2051 -1263 320 314 230 17 chr2 40316481 40316777 -210371077 + L2 LINE L2 2529 2887 -427 558 143 0 0 chr2 40316777 40316861 -210370993 - AluJ/FRAM SINE Alu -8 304 221 801 293 80 27 chr2 40316861 40317236 -210370618 + L2 LINE L2 2879 3273 -40 510 241 126 53 chr2 40318174 40318381 -210369473 - L2 LINE L2 -357 2957 2736 1530 149 92 126 chr2 40318428 40318947 -210368907 + Charlie1 DNA MER1_type 2217 2718 -43 2131 87 0 28 chr2 40318947 40319265 -210368589 + AluSg1 SINE Alu 1 310 0 1530 149 92 126 chr2 40319265 40319307 -210368547 + Charlie1 DNA MER1_type 2718 2760 -1 2511 57 0 3 chr2 40321185 40321481 -210366373 + AluY SINE Alu 1 295 -16 197 250 0 54 chr2 40321613 40321669 -210366185 + MIR3 SINE MIR 141 193 -15 740 229 54 12 chr2 40321947 40322113 -210365741 + MER5A DNA MER1_type 17 189 0 1939 151 0 22 chr2 40322132 40322444 -210365410 - AluSx SINE Alu -5 307 3 24 53 0 0 chr2 40322518 40322556 -210365298 + AT_rich Low_complexity Low_complexity 1 38 0 2215 161 56 16 chr2 40323116 40323189 -210364665 + L1MB8 LINE L1 5208 5277 -901 2205 107 0 0 chr2 40323189 40323480 -210364374 + AluY SINE Alu 1 291 -20 2215 161 56 16 chr2 40323480 40324150 -210363704 + L1MB8 LINE L1 5277 6126 -52 851 173 0 0 chr2 40324167 40324323 -210363531 + L1MA9 LINE L1 5088 5243 -903 1854 106 84 0 chr2 40324323 40324598 -210363256 - AluSx SINE Alu -14 298 1 3422 138 43 20 chr2 40324607 40325209 -210362645 + L1MA9 LINE L1 5346 5961 -351 1797 170 3 13 chr2 40325215 40325515 -210362339 + AluJb SINE Alu 1 297 -15 2251 139 57 63 chr2 40325568 40325993 -210361861 - MSTB LTR MaLR -4 422 1 2390 92 3 0 chr2 40326507 40326812 -210361042 + AluSg SINE Alu 1 306 -4 1684 184 9 35 chr2 40326824 40327140 -210360714 + AluJb SINE Alu 3 310 -2 1931 135 3 44 chr2 40327244 40327563 -210360291 + AluJb SINE Alu 1 306 -6 4146 192 39 56 chr2 40327570 40328581 -210359273 + L1MB4 LINE L1 4323 5328 -852 2088 128 0 7 chr2 40328581 40328879 -210358975 + AluSq SINE Alu 3 298 -15 4146 192 39 56 chr2 40328879 40329282 -210358572 + L1MB4 LINE L1 5328 5736 -444 1082 192 0 0 chr2 40329293 40329491 -210358363 + L1MB4 LINE L1 5792 5989 -191 622 156 8 33 chr2 40329495 40329617 -210358237 + L1MB4 LINE L1 6062 6180 0 689 152 72 24 chr2 40329872 40329997 -210357857 - FLAM_C SINE Alu -1 132 2 21 0 0 0 chr2 40330120 40330141 -210357713 + AT_rich Low_complexity Low_complexity 1 21 0 1976 139 3 10 chr2 40330197 40330498 -210357356 + AluSx SINE Alu 1 299 -13 1522 162 0 12 chr2 40330518 40330765 -210357089 + AluJb SINE Alu 3 246 -66 261 0 0 0 chr2 40330766 40330795 -210357059 + (CA)n Simple_repeat Simple_repeat 2 30 0 2804 10 0 3 chr2 40330890 40331200 -210356654 + AluYa5 SINE Alu 1 309 -2 1419 262 79 14 chr2 40331777 40332208 -210355646 + LTR16B LTR ERVL 6 464 0 195 42 0 0 chr2 40332239 40332263 -210355591 + (A)n Simple_repeat Simple_repeat 1 24 0 607 273 188 29 chr2 40332611 40333025 -210354829 + L2 LINE L2 2368 2847 -467 231 114 0 0 chr2 40333123 40333158 -210354696 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1828 175 0 20 chr2 40333188 40333491 -210354363 + AluJo SINE Alu 1 297 -15 1765 186 0 0 chr2 40333498 40333819 -210354035 + AluJb SINE Alu 1 321 0 345 315 103 30 chr2 40334200 40334403 -210353451 + MIR SINE MIR 31 248 -14 296 192 267 20 chr2 40334452 40334598 -210353256 + L1M4 LINE L1 4663 4844 -1302 498 75 0 0 chr2 40334608 40334675 -210353179 + (TG)n Simple_repeat Simple_repeat 2 68 0 1636 163 62 20 chr2 40334679 40334985 -210352869 + MER2 DNA MER2_type 2 320 -25 399 127 0 0 chr2 40335077 40335132 -210352722 + MER66A LTR ERV1 284 338 -140 341 337 18 18 chr2 40335144 40335313 -210352541 + L1M4 LINE L1 4890 5058 -1088 243 253 60 0 chr2 40335317 40335400 -210352454 + L1M4 LINE L1 5080 5167 -979 965 134 0 0 chr2 40335400 40335534 -210352320 + AluSq/x SINE Alu 1 134 -178 2204 101 10 0 chr2 40335535 40335823 -210352031 + AluSx SINE Alu 1 291 -21 298 249 25 41 chr2 40335842 40335978 -210351876 + L1MC4 LINE L1 7779 8015 -27 998 172 54 14 chr2 40336083 40336170 -210351684 - AluJo SINE Alu -82 230 148 2586 43 0 13 chr2 40336170 40336474 -210351380 - AluY SINE Alu -11 300 1 998 172 54 14 chr2 40336474 40336607 -210351247 - AluJo SINE Alu -164 148 1 191 200 32 11 chr2 40336766 40336861 -210350993 + (TA)n Simple_repeat Simple_repeat 1 97 0 504 92 15 0 chr2 40337120 40337185 -210350669 + AluS SINE Alu 2 67 -246 2018 81 0 0 chr2 40337285 40337531 -210350323 - AluSc SINE Alu -63 246 1 581 236 34 91 chr2 40338052 40338260 -210349594 - MIR3 SINE MIR -7 201 6 728 112 10 0 chr2 40338277 40338375 -210349479 - AluSg/x SINE Alu -15 297 199 1582 159 39 12 chr2 40338382 40338639 -210349215 - AluJb SINE Alu -48 264 1 355 74 19 0 chr2 40338717 40338807 -210349047 + Alu SINE Alu 247 337 0 2155 116 7 0 chr2 40338912 40339230 -210348624 - AluSq SINE Alu 0 313 1 27 0 0 0 chr2 40339293 40339320 -210348534 + AT_rich Low_complexity Low_complexity 1 27 0 871 115 0 8 chr2 40339444 40339566 -210348288 + AluSq/x SINE Alu 14 134 -179 2228 95 10 7 chr2 40339695 40339999 -210347855 + AluSx SINE Alu 1 305 -7 360 0 0 0 chr2 40340000 40340040 -210347814 + (TA)n Simple_repeat Simple_repeat 1 40 0 1344 247 77 70 chr2 40340049 40340592 -210347262 - MLT1H LTR MaLR 0 549 3 1871 115 4 4 chr2 40341639 40341892 -210345962 + AluSx SINE Alu 1 253 -59 2254 96 13 0 chr2 40342285 40342588 -210345266 - AluSp SINE Alu -6 307 1 2129 110 3 17 chr2 40342588 40342888 -210344966 - AluSg SINE Alu -14 296 1 186 43 0 0 chr2 40343082 40343105 -210344749 + (GAA)n Simple_repeat Simple_repeat 2 24 0 518 324 55 34 chr2 40343113 40343162 -210344692 - L1MC4 LINE L1 -772 7270 7224 1019 183 63 0 chr2 40343162 40343337 -210344517 + MER5A DNA MER1_type 2 187 -2 518 324 55 34 chr2 40343337 40343667 -210344187 - L1MC4 LINE L1 -818 7224 6883 22 0 0 0 chr2 40344382 40344404 -210343450 + AT_rich Low_complexity Low_complexity 1 22 0 493 173 79 0 chr2 40344431 40344558 -210343296 + L1MB7 LINE L1 6045 6181 -3 1025 90 8 0 chr2 40344616 40344749 -210343105 + AluSq/x SINE Alu 2 135 -177 1935 142 0 0 chr2 40344749 40345060 -210342794 + AluSg SINE Alu 1 311 0 382 203 56 77 chr2 40345423 40345566 -210342288 + L1ME LINE L1 5620 5759 -362 1747 127 82 4 chr2 40345739 40346007 -210341847 - AluSx SINE Alu -23 289 1 189 0 0 0 chr2 40346252 40346273 -210341581 + (T)n Simple_repeat Simple_repeat 1 21 0 1562 181 10 46 chr2 40346573 40346877 -210340977 + AluJb SINE Alu 11 303 -9 430 210 239 36 chr2 40347044 40347182 -210340672 - MER5A DNA MER1_type -2 187 11 2058 134 0 10 chr2 40347543 40347835 -210340019 - AluSx SINE Alu -23 289 1 183 100 0 0 chr2 40348028 40348058 -210339796 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1507 155 91 8 chr2 40348670 40348935 -210338919 + AluJo SINE Alu 1 287 -25 28 0 0 0 chr2 40349173 40349201 -210338653 + AT_rich Low_complexity Low_complexity 1 28 0 2224 115 0 0 chr2 40349201 40349505 -210338349 - AluSx SINE Alu -8 304 1 1746 171 3 0 chr2 40349929 40350221 -210337633 - AluJb SINE Alu -19 293 1 1858 67 7 100 chr2 40350945 40351244 -210336610 + AluSx SINE Alu 3 273 -39 537 200 0 0 chr2 40351349 40351434 -210336420 - AluSg/x SINE Alu -38 271 187 303 271 53 68 chr2 40351437 40351488 -210336366 - L1MC4a LINE L1 -1875 5933 5883 2134 145 3 0 chr2 40351488 40351792 -210336062 - AluJb SINE Alu -7 305 1 303 271 53 68 chr2 40351792 40351873 -210335981 - L1MC4a LINE L1 -1925 5883 5803 249 151 41 123 chr2 40351938 40352011 -210335843 + L1ME LINE L1 5830 5896 -225 2007 139 0 0 chr2 40352562 40352842 -210335012 + AluSx SINE Alu 1 280 -32 213 65 0 0 chr2 40352843 40352874 -210334980 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 756 177 0 57 chr2 40352999 40353140 -210334714 - FLAM_C SINE Alu 0 133 1 2451 192 101 9 chr2 40353149 40353686 -210334168 - L1MD3 LINE L1 0 7995 7410 473 197 1 11 chr2 40353687 40353787 -210334067 - MLT1F1 LTR MaLR -442 125 35 342 165 12 47 chr2 40353787 40353872 -210333982 - L1MD3 LINE L1 -879 7116 7035 274 284 136 0 chr2 40354000 40354081 -210333773 + MIR SINE MIR 19 110 -152 235 161 143 0 chr2 40354182 40354238 -210333616 + AluSc SINE Alu 236 299 0 2311 77 10 3 chr2 40354405 40354703 -210333151 - AluSq SINE Alu -13 300 1 184 324 68 14 chr2 40354709 40354783 -210333071 + L2 LINE L2 3234 3311 -2 338 342 199 23 chr2 40355344 40355645 -210332209 - L2 LINE L2 -4 3268 2915 958 253 39 32 chr2 40355945 40356230 -210331624 - MER102b DNA MER1_type -45 296 10 56 55 0 0 chr2 40357941 40358032 -210329822 + GC_rich Low_complexity Low_complexity 1 91 0 252 59 0 0 chr2 40358237 40358271 -210329583 + (CCG)n Simple_repeat Simple_repeat 1 34 0 186 103 0 0 chr2 40358389 40358418 -210329436 + (GA)n Simple_repeat Simple_repeat 1 29 0 180 147 0 0 chr2 40359182 40359216 -210328638 - MIR SINE MIR -63 199 166 2265 98 0 10 chr2 40359414 40359711 -210328143 + AluSq SINE Alu 1 294 -19 294 29 0 0 chr2 40359714 40359749 -210328105 + (CA)n Simple_repeat Simple_repeat 2 36 0 686 86 0 0 chr2 40359754 40359847 -210328007 + AluS SINE Alu 2 94 -219 666 168 82 8 chr2 40360357 40360522 -210327332 + L1ME LINE L1 5634 5806 -358 1229 176 69 50 chr2 40360580 40360740 -210327114 + L1ME1 LINE L1 5657 5812 -354 2062 130 0 70 chr2 40360740 40361071 -210326783 + AluJb SINE Alu 1 308 -4 1229 176 69 50 chr2 40361071 40361230 -210326624 + L1ME1 LINE L1 5812 5980 -186 624 182 0 8 chr2 40361240 40361372 -210326482 + L1MA10 LINE L1 6203 6333 -1 2045 129 27 3 chr2 40361580 40361874 -210325980 + AluSx SINE Alu 1 301 -11 2445 90 6 0 chr2 40361876 40362187 -210325667 + AluSp SINE Alu 1 313 0 1095 189 0 5 chr2 40362198 40362394 -210325460 + AluJb SINE Alu 118 312 0 182 344 109 8 chr2 40362394 40362522 -210325332 - L2 LINE L2 -1321 1993 1853 263 267 208 0 chr2 40362782 40362883 -210324971 - MIR SINE MIR -49 213 92 202 139 0 23 chr2 40362900 40362943 -210324911 + (TTTTTA)n Simple_repeat Simple_repeat 2 43 0 1427 185 58 25 chr2 40362997 40363273 -210324581 + AluJo SINE Alu 2 286 -26 2028 130 13 7 chr2 40363414 40363721 -210324133 - AluSx SINE Alu -3 309 1 966 153 38 0 chr2 40363855 40364012 -210323842 + AluJb SINE Alu 141 303 -9 1906 128 24 7 chr2 40364137 40364426 -210323428 + AluJb SINE Alu 2 295 -17 275 296 0 10 chr2 40364893 40364991 -210322863 + (TA)n Simple_repeat Simple_repeat 1 97 0 1987 121 8 0 chr2 40366482 40366746 -210321108 - AluSx SINE Alu -46 266 1 2234 77 7 0 chr2 40367417 40367689 -210320165 - AluSq SINE Alu -12 301 28 2246 111 3 0 chr2 40367691 40367997 -210319857 - AluSx SINE Alu 0 312 6 227 298 48 65 chr2 40368446 40368570 -210319284 - L2 LINE L2 0 3313 3192 704 238 21 47 chr2 40369266 40369459 -210318395 + MER5A DNA MER1_type 2 189 0 460 141 272 0 chr2 40369772 40369864 -210317990 + FLAM_C SINE Alu 1 117 -26 2183 120 13 0 chr2 40370337 40370637 -210317217 - AluSx SINE Alu -8 304 1 714 294 54 49 chr2 40370684 40371150 -210316704 + L2 LINE L2 1840 2307 -1007 1346 246 46 11 chr2 40371163 40371513 -210316341 + MLT1C LTR MaLR 1 362 -105 1779 175 7 29 chr2 40371632 40371941 -210315913 - AluJo SINE Alu -10 302 1 2069 103 43 4 chr2 40372650 40372931 -210314923 + AluSc SINE Alu 1 292 -17 380 307 25 19 chr2 40373607 40373780 -210314074 - MER5A DNA MER1_type -3 186 2 333 118 0 0 chr2 40374347 40374398 -210313456 + (TG)n Simple_repeat Simple_repeat 2 52 0 1622 192 3 3 chr2 40374399 40374685 -210313169 - AluJo SINE Alu -26 286 1 188 256 0 0 chr2 40374937 40374980 -210312874 + MIR SINE MIR 111 153 -55 2215 114 6 22 chr2 40375168 40375483 -210312371 + AluSx SINE Alu 1 310 -2 401 308 27 0 chr2 40375736 40375882 -210311972 + MIR SINE MIR 107 256 -6 1512 133 35 18 chr2 40375948 40376233 -210311621 + L1MA8 LINE L1 6002 6291 0 23 0 0 0 chr2 40377326 40377349 -210310505 + AT_rich Low_complexity Low_complexity 1 23 0 2053 125 7 3 chr2 40377349 40377638 -210310216 - AluSx SINE Alu -22 290 1 303 246 92 42 chr2 40377650 40377792 -210310062 - MIR3 SINE MIR -11 197 49 2210 110 0 0 chr2 40378479 40378761 -210309093 - AluSx SINE Alu -28 284 3 625 90 0 0 chr2 40379277 40379366 -210308488 - AluSx SINE Alu -9 300 212 1176 145 0 0 chr2 40379367 40379533 -210308321 - AluSx SINE Alu -146 166 1 1352 170 112 23 chr2 40379561 40379846 -210308008 - AluJb SINE Alu 0 308 1 2120 138 3 0 chr2 40380022 40380326 -210307528 + AluJb SINE Alu 1 305 -7 991 137 159 56 chr2 40380909 40381139 -210306715 + AluJo SINE Alu 5 268 -34 2237 98 7 10 chr2 40381139 40381436 -210306418 - AluSq SINE Alu -17 296 1 991 137 159 56 chr2 40381436 40381475 -210306379 + AluJo SINE Alu 268 302 0 2487 64 3 22 chr2 40381515 40381829 -210306025 - AluY SINE Alu -2 309 2 2275 53 0 4 chr2 40381939 40382204 -210305650 - AluY SINE Alu -47 264 1 2657 48 0 10 chr2 40383060 40383374 -210304480 - AluY SINE Alu 0 311 1 2134 89 7 0 chr2 40383467 40383800 -210304054 - AluSg SINE Alu 0 335 1 235 299 39 0 chr2 40384265 40384342 -210303512 + MIR SINE MIR 93 172 -90 877 158 0 0 chr2 40384481 40384614 -210303240 + FLAM_C SINE Alu 1 133 -10 1955 106 22 4 chr2 40384618 40384893 -210302961 + AluSx SINE Alu 3 282 -30 474 398 33 18 chr2 40384930 40385325 -210302529 - L2 LINE L2 -1863 1451 1051 207 0 0 0 chr2 40385326 40385349 -210302505 + (TAA)n Simple_repeat Simple_repeat 3 25 0 2010 139 0 40 chr2 40385485 40385808 -210302046 - AluSx SINE Alu -2 310 1 259 304 11 0 chr2 40385846 40385938 -210301916 + L1M4 LINE L1 3745 3837 -2309 1683 244 66 29 chr2 40385987 40386494 -210301360 - MLT1G3 LTR MaLR 0 530 20 2845 174 57 8 chr2 40386498 40387026 -210300828 - MLT2B3 LTR ERVL 0 554 1 25 0 0 0 chr2 40387059 40387084 -210300770 + AT_rich Low_complexity Low_complexity 1 25 0 352 137 0 0 chr2 40387112 40387163 -210300691 - ERVL-B3 LTR ERVL -32 5732 5682 1625 161 49 26 chr2 40387163 40387468 -210300386 + AluJo SINE Alu 1 312 0 230 0 33 0 chr2 40387470 40387500 -210300354 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 7196 133 25 27 chr2 40387505 40387792 -210300062 - ERVL-B3 LTR ERVL -72 5692 5406 1810 167 4 0 chr2 40387792 40388073 -210299781 - AluJb SINE Alu -30 282 1 7196 133 25 27 chr2 40388073 40388962 -210298892 - ERVL-B3 LTR ERVL -358 5406 4519 273 137 118 0 chr2 40389005 40389056 -210298798 - MLT1G3 LTR MaLR -538 57 1 2887 120 3 111 chr2 40389131 40389655 -210298199 + L1MB2 LINE L1 5639 6095 -76 815 61 0 0 chr2 40389655 40389754 -210298100 + HY3 scRNA scRNA 1 99 -2 2887 120 3 111 chr2 40389754 40389814 -210298040 + L1MB2 LINE L1 6095 6160 -11 2107 146 3 0 chr2 40389816 40390118 -210297736 - AluSx SINE Alu -9 303 1 376 276 89 31 chr2 40390568 40390825 -210297029 + L1M4 LINE L1 4179 4450 -1696 2326 97 0 0 chr2 40391474 40391764 -210296090 + AluSg SINE Alu 1 290 -20 259 211 0 0 chr2 40391972 40392024 -210295830 - LTR16A LTR ERVL -8 442 391 2306 68 0 0 chr2 40392024 40392349 -210295505 + AluY SINE Alu 1 325 0 436 276 134 37 chr2 40392349 40392375 -210295479 - L1M4 LINE L1 -1082 5064 5042 2068 68 0 87 chr2 40392375 40392697 -210295157 - AluSc SINE Alu -15 294 1 436 276 134 37 chr2 40392697 40393133 -210294721 - L1M4 LINE L1 -1104 5042 4557 300 337 55 25 chr2 40393804 40393967 -210293887 - L2 LINE L2 -465 2849 2682 237 241 35 0 chr2 40394657 40394715 -210293139 - L3 LINE CR1 -5 1572 1513 438 279 153 60 chr2 40394817 40394925 -210292929 - L2 LINE L2 -1 3312 3215 2277 115 7 0 chr2 40394925 40395229 -210292625 + AluSx SINE Alu 1 306 -6 438 279 153 60 chr2 40395229 40395660 -210292194 - L2 LINE L2 -98 3215 2727 245 219 94 16 chr2 40395675 40395739 -210292115 - L3 LINE CR1 -265 1312 1244 1276 112 0 0 chr2 40395739 40395908 -210291946 + AluSg SINE Alu 1 169 -141 343 223 69 62 chr2 40396010 40396140 -210291714 + MIR SINE MIR 82 212 -50 2266 90 0 27 chr2 40396213 40396513 -210291341 + AluSx SINE Alu 1 292 -20 2284 118 0 0 chr2 40397852 40398157 -210289697 + AluSx SINE Alu 1 305 -7 831 175 36 72 chr2 40398405 40398628 -210289226 - L1ME2 LINE L1 -2 6162 5948 1450 126 51 12 chr2 40398628 40399060 -210288794 - LTR54 LTR ERV1 0 510 1 346 185 92 85 chr2 40399067 40399197 -210288657 - L1ME2 LINE L1 -220 5944 5814 4547 143 27 4 chr2 40399211 40399980 -210287874 - L1MB4 LINE L1 -6 6174 5388 2419 76 0 13 chr2 40400074 40400389 -210287465 - AluY SINE Alu 0 311 1 1576 106 208 0 chr2 40400391 40400636 -210287218 - AluSq SINE Alu -17 296 1 2359 89 0 7 chr2 40400756 40401060 -210286794 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 40401119 40401158 -210286696 + AT_rich Low_complexity Low_complexity 1 39 0 2563 199 50 4 chr2 40401367 40401884 -210285970 - MLT1F LTR MaLR 0 542 2 888 133 0 0 chr2 40402100 40402228 -210285626 + FLAM_C SINE Alu 5 132 -1 1552 155 65 47 chr2 40402652 40402961 -210284893 + AluJo SINE Alu 3 316 0 23 0 0 0 chr2 40403105 40403128 -210284726 + AT_rich Low_complexity Low_complexity 1 23 0 2217 104 7 7 chr2 40403476 40403774 -210284080 - AluSq SINE Alu -15 298 1 1058 98 0 0 chr2 40403788 40403921 -210283933 - AluSq/x SINE Alu -180 133 1 316 269 57 77 chr2 40404046 40404178 -210283676 + MLT1H LTR MaLR 18 151 -398 2189 106 0 7 chr2 40404178 40404471 -210283383 - AluSg SINE Alu -19 291 1 316 269 57 77 chr2 40404471 40404608 -210283246 + MLT1H LTR MaLR 151 330 -219 657 182 94 130 chr2 40404619 40404927 -210282927 + MLT1H1 LTR MaLR 259 555 0 221 245 19 0 chr2 40405006 40405059 -210282795 + GA-rich Low_complexity Low_complexity 1 54 0 243 88 0 0 chr2 40405213 40405247 -210282607 + (T)n Simple_repeat Simple_repeat 1 34 0 625 219 80 110 chr2 40405410 40405711 -210282143 + MLT1I LTR MaLR 101 392 -17 269 266 90 102 chr2 40405731 40405749 -210282105 + HAL1 LINE L1 1434 1451 -1056 1853 147 3 11 chr2 40405749 40406063 -210281791 + AluSx SINE Alu 1 312 0 269 266 90 102 chr2 40406063 40406222 -210281632 + HAL1 LINE L1 1451 1611 -896 562 242 8 0 chr2 40406222 40406354 -210281500 + FLAM_A SINE Alu 1 133 0 269 266 90 102 chr2 40406354 40406430 -210281424 + HAL1 LINE L1 1611 1686 -821 604 283 39 5 chr2 40406546 40406751 -210281103 + L1ME LINE L1 5533 5744 -377 968 106 0 0 chr2 40406755 40406887 -210280967 + FLAM_C SINE Alu 1 132 -1 283 60 40 20 chr2 40406892 40406942 -210280912 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 751 156 0 0 chr2 40407190 40407312 -210280542 - AluSg/x SINE Alu -1 308 187 334 293 80 64 chr2 40407315 40407374 -210280480 - L1MC4a LINE L1 -1875 5933 5876 2017 166 3 0 chr2 40407374 40407670 -210280184 - AluJb SINE Alu -15 297 1 334 293 80 64 chr2 40407670 40407798 -210280056 - L1MC4a LINE L1 -1932 5876 5743 2037 109 4 13 chr2 40408083 40408398 -210279456 + AluSx SINE Alu 1 281 -31 726 133 142 8 chr2 40408668 40408788 -210279066 + AluJo SINE Alu 1 136 -176 1942 104 17 10 chr2 40408788 40409087 -210278767 + AluSc SINE Alu 1 301 -8 351 263 170 0 chr2 40409227 40409398 -210278456 + MIR SINE MIR 63 262 0 1969 131 7 27 chr2 40410177 40410503 -210277351 + AluSx SINE Alu 1 320 0 2409 84 3 7 chr2 40410678 40410988 -210276866 + AluSc SINE Alu 1 309 0 1260 175 0 10 chr2 40411099 40411305 -210276549 - AluJb SINE Alu -24 288 85 514 224 35 17 chr2 40411306 40411422 -210276432 - MIR SINE MIR -100 162 45 358 327 6 42 chr2 40411706 40411880 -210275974 + MIR SINE MIR 42 206 -56 1391 204 25 28 chr2 40411997 40412316 -210275538 + MER58B DNA MER1_type 24 341 0 33 0 0 0 chr2 40412610 40412643 -210275211 + AT_rich Low_complexity Low_complexity 1 33 0 1693 200 59 41 chr2 40413230 40413514 -210274340 + MLT1C LTR MaLR 1 298 -169 1889 165 17 0 chr2 40413514 40413811 -210274043 + AluSx SINE Alu 1 302 -10 1693 200 59 41 chr2 40413811 40413985 -210273869 + MLT1C LTR MaLR 298 467 0 396 271 45 7 chr2 40414597 40414752 -210273102 - L1ME4a LINE L1 -4 6117 5957 1151 151 9 57 chr2 40414771 40414983 -210272871 - AluJo SINE Alu -23 289 88 304 273 67 7 chr2 40414999 40415149 -210272705 - L1ME4a LINE L1 -205 5916 5758 1928 163 0 7 chr2 40415241 40415547 -210272307 + AluJb SINE Alu 1 304 -8 782 150 8 23 chr2 40415550 40415683 -210272171 + FLAM_C SINE Alu 2 132 -1 2133 105 3 0 chr2 40415754 40416072 -210271782 - AluSp SINE Alu 0 319 1 372 231 117 30 chr2 40416082 40416408 -210271446 - L1ME4a LINE L1 -11 6110 5695 1593 154 20 72 chr2 40416573 40416879 -210270975 + AluJb SINE Alu 1 290 -22 369 217 141 49 chr2 40416905 40417089 -210270765 - L1ME4a LINE L1 -2340 5468 5268 4365 144 26 12 chr2 40417198 40418008 -210269846 - L1MB4 LINE L1 -7 6173 5353 974 169 0 6 chr2 40418039 40418205 -210269649 - AluSg/x SINE Alu -11 301 137 1176 141 0 0 chr2 40418250 40418448 -210269406 + L1PB1 LINE L1 1 198 -6665 * 14194 169 57 26 chr2 40418444 40419010 -210268844 + L1PB1 LINE L1 995 1542 -5325 2191 116 3 0 chr2 40419010 40419304 -210268550 - AluSx SINE Alu -17 295 1 14194 169 57 26 chr2 40419304 40424347 -210263507 + L1PB1 LINE L1 1542 6428 -439 1870 151 0 0 chr2 40424347 40424625 -210263229 + AluSx SINE Alu 1 278 -34 14194 169 57 26 chr2 40424625 40424636 -210263218 + L1PB1 LINE L1 6428 6437 -430 459 0 0 0 chr2 40424636 40424687 -210263167 + (CAAAA)n Simple_repeat Simple_repeat 3 53 0 14194 169 57 26 chr2 40424687 40424747 -210263107 + L1PB1 LINE L1 6437 6867 0 1632 194 62 2 chr2 40424754 40425155 -210262699 - L1MB4 LINE L1 -797 5349 4925 317 261 58 7 chr2 40425978 40426116 -210261738 - L1ME4a LINE L1 -199 5922 5778 34 72 0 0 chr2 40427196 40427265 -210260589 + AT_rich Low_complexity Low_complexity 1 69 0 1687 184 16 7 chr2 40427299 40427603 -210260251 + AluJo SINE Alu 1 307 -5 307 222 0 0 chr2 40427819 40427882 -210259972 + MER94 DNA DNA 1 63 -71 2420 68 3 0 chr2 40427882 40428191 -210259663 + AluY SINE Alu 1 310 -1 369 200 119 10 chr2 40428336 40428481 -210259373 + L1MC4 LINE L1 7085 7240 -721 421 226 48 0 chr2 40428607 40428731 -210259123 + L1MC5 LINE L1 7261 7390 -571 1050 163 0 6 chr2 40428769 40428941 -210258913 + MER5A DNA MER1_type 17 187 -2 2565 54 0 0 chr2 40428961 40429259 -210258595 - AluY SINE Alu -13 298 1 1840 156 3 7 chr2 40429398 40429687 -210258167 - AluSx SINE Alu -24 288 1 698 146 9 0 chr2 40429886 40429996 -210257858 - FLAM_C SINE Alu -18 125 15 181 164 66 0 chr2 40430447 40430508 -210257346 + A-rich Low_complexity Low_complexity 5 69 0 2043 128 0 17 chr2 40430616 40430949 -210256905 - AluSx SINE Alu 0 328 1 305 256 102 34 chr2 40431160 40431336 -210256518 - L1ME4a LINE L1 -2014 5794 5607 522 245 53 50 chr2 40431781 40432083 -210255771 - L1ME4a LINE L1 -575 5587 5285 23 0 0 0 chr2 40432250 40432273 -210255581 + AT_rich Low_complexity Low_complexity 1 23 0 493 218 92 28 chr2 40432749 40432891 -210254963 + MIR SINE MIR 1 151 -111 398 283 254 31 chr2 40433013 40433363 -210254491 - L2 LINE L2 -337 2977 2550 301 213 0 0 chr2 40433960 40434021 -210253833 - MADE1 DNA Mariner 0 80 20 366 329 33 13 chr2 40434268 40434420 -210253434 + L2 LINE L2 2763 2917 -397 2274 95 3 0 chr2 40434420 40434759 -210253095 - AluSp SINE Alu 0 340 1 204 158 0 0 chr2 40434800 40434838 -210253016 + T-rich Low_complexity Low_complexity 4 41 0 2699 151 34 55 chr2 40434874 40434946 -210252908 + MLT2B2 LTR ERVL 2 74 -441 1492 196 28 10 chr2 40434946 40435237 -210252617 + AluJo SINE Alu 2 297 -15 2699 151 34 55 chr2 40435237 40435689 -210252165 + MLT2B2 LTR ERVL 74 515 0 409 306 41 0 chr2 40435767 40435865 -210251989 + L2 LINE L2 3148 3249 -23 263 288 135 0 chr2 40435867 40435978 -210251876 + LTR67 LTR ERVL 432 557 0 1898 149 3 3 chr2 40436127 40436446 -210251408 - AluSx SINE Alu 0 319 1 377 317 56 29 chr2 40437005 40437311 -210250543 + ERVL LTR ERVL 818 1131 -4633 2309 87 10 7 chr2 40437312 40437612 -210250242 - AluSx SINE Alu -11 301 1 2283 89 0 10 chr2 40437702 40438040 -210249814 - AluY SINE Alu 0 335 1 236 283 38 28 chr2 40438160 40438266 -210249588 - HAL1 LINE L1 -2399 108 2 342 309 197 55 chr2 40438465 40438795 -210249059 + L2 LINE L2 2896 3272 0 182 273 61 40 chr2 40438794 40438893 -210248961 - L2 LINE L2 -52 3261 3161 * 1926 142 0 0 chr2 40439033 40439341 -210248513 + AluSx SINE Alu 1 308 0 22 0 0 0 chr2 40439564 40439586 -210248268 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr2 40439671 40439716 -210248138 + AT_rich Low_complexity Low_complexity 1 45 0 789 271 50 34 chr2 40439794 40440312 -210247542 - L1ME4a LINE L1 -237 5884 5351 1669 154 56 0 chr2 40440356 40440623 -210247231 - AluJb SINE Alu -30 282 1 22 35 0 0 chr2 40440752 40440781 -210247073 + AT_rich Low_complexity Low_complexity 1 29 0 423 304 87 33 chr2 40440992 40441224 -210246630 - L1ME4a LINE L1 -1525 4621 4403 1886 144 48 0 chr2 40441224 40441516 -210246338 - AluSx SINE Alu -6 306 1 423 304 87 33 chr2 40441516 40441859 -210245995 - L1ME4a LINE L1 -1743 4403 4015 2093 79 0 22 chr2 40441876 40442143 -210245711 + AluSg1 SINE Alu 31 291 -18 336 40 80 0 chr2 40443144 40443219 -210244635 + (TA)n Simple_repeat Simple_repeat 1 81 0 287 224 0 0 chr2 40443403 40443461 -210244393 + MER94 DNA DNA 75 132 -2 288 248 43 99 chr2 40443471 40443509 -210244345 + MER94 DNA DNA 1 40 -94 1691 135 30 63 chr2 40443509 40443812 -210244042 - AluSx SINE Alu -19 293 1 288 248 43 99 chr2 40443812 40443914 -210243940 + MER94 DNA DNA 40 133 -1 524 188 0 0 chr2 40444215 40444311 -210243543 + FLAM_A SINE Alu 43 138 -4 190 260 73 42 chr2 40444537 40444633 -210243221 - MIR SINE MIR -99 163 65 475 247 187 0 chr2 40445283 40445433 -210242421 + MER5A DNA MER1_type 12 189 0 244 299 11 11 chr2 40445433 40445520 -210242334 + MIR3 SINE MIR 112 198 -10 1714 120 139 0 chr2 40446824 40447083 -210240771 + AluSp SINE Alu 1 295 -18 279 211 70 0 chr2 40447486 40447557 -210240297 - MIR SINE MIR -83 179 104 2191 100 0 7 chr2 40447654 40447943 -210239911 + AluSx SINE Alu 1 287 -25 243 0 0 0 chr2 40447946 40447973 -210239881 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 878 218 0 0 chr2 40448497 40448653 -210239201 + FRAM SINE Alu 1 156 -10 254 353 35 17 chr2 40449128 40449244 -210238610 + L2 LINE L2 2259 2376 -938 2458 90 0 0 chr2 40449490 40449801 -210238053 + AluY SINE Alu 1 311 0 21 57 0 0 chr2 40450589 40450624 -210237230 + AT_rich Low_complexity Low_complexity 1 35 0 2212 91 7 7 chr2 40450639 40450937 -210236917 - AluSc SINE Alu -11 298 1 629 284 112 47 chr2 40451138 40451616 -210236238 + HAL1b LINE L1 58 598 -750 1504 193 56 14 chr2 40451616 40451901 -210235953 - AluJo SINE Alu -15 297 1 629 284 112 47 chr2 40451901 40452129 -210235725 + HAL1b LINE L1 598 810 -538 1381 192 4 31 chr2 40452224 40452479 -210235375 + AluJo SINE Alu 39 286 -26 846 244 23 9 chr2 40452871 40453092 -210234762 - MER58A DNA MER1_type 0 224 1 2118 167 103 11 chr2 40455104 40455570 -210232284 - LTR22 LTR ERVK 0 509 1 203 290 131 70 chr2 40456343 40456557 -210231297 + MIR SINE MIR 10 236 -26 2157 85 0 20 chr2 40457209 40457503 -210230351 - AluSc SINE Alu -21 288 1 535 305 150 9 chr2 40457515 40457728 -210230126 - MIR SINE MIR -18 244 2 839 181 0 0 chr2 40458817 40458950 -210228904 - AluSq/x SINE Alu -179 133 1 483 293 52 14 chr2 40459243 40459397 -210228457 - L1ME LINE L1 -398 6579 6422 551 279 144 15 chr2 40459412 40459753 -210228101 - L1ME LINE L1 -1117 5840 5456 875 135 0 0 chr2 40459770 40459896 -210227958 - FLAM_C SINE Alu -17 126 1 789 299 151 18 chr2 40459897 40460867 -210226987 - L1ME LINE L1 -1488 5469 4368 572 197 21 0 chr2 40461590 40461732 -210226122 + AluSg1 SINE Alu 1 145 -164 1699 184 17 14 chr2 40462424 40462717 -210225137 + AluJo SINE Alu 1 294 -18 1914 191 68 49 chr2 40463398 40463910 -210223944 - L1MC4 LINE L1 -89 7953 7432 1084 169 40 122 chr2 40463917 40464271 -210223583 - L1MB5 LINE L1 -226 5948 5624 1309 115 92 5 chr2 40464282 40464443 -210223411 - AluSx SINE Alu -12 300 114 261 0 0 0 chr2 40464443 40464472 -210223382 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1309 115 92 5 chr2 40464472 40464528 -210223326 - AluSx SINE Alu -198 114 64 597 230 133 12 chr2 40464629 40464959 -210222895 - L1ME LINE L1 -2612 4345 3976 * 1843 245 44 21 chr2 40464953 40465679 -210222175 - L1ME LINE L1 -4833 2022 1372 287 136 34 17 chr2 40465715 40465774 -210222080 - L1ME LINE L1 -5467 1392 1333 21 0 0 0 chr2 40466286 40466307 -210221547 + AT_rich Low_complexity Low_complexity 1 21 0 2090 81 7 17 chr2 40466326 40466624 -210221230 - AluSq SINE Alu -18 295 1 1626 189 174 21 chr2 40466688 40467112 -210220742 + MLT1F LTR MaLR 1 489 -53 337 291 108 7 chr2 40467120 40467268 -210220586 + L1MEc LINE L1 1655 1817 -4579 284 232 43 0 chr2 40467339 40467408 -210220446 + MLT1F LTR MaLR 496 567 0 1748 140 9 55 chr2 40467796 40468124 -210219730 - AluSq SINE Alu 0 313 1 1810 167 6 13 chr2 40468594 40468906 -210218948 + AluJb SINE Alu 2 311 -1 722 120 30 135 chr2 40469805 40469954 -210217900 - AluSc SINE Alu -49 260 136 2042 102 3 7 chr2 40469954 40470239 -210217615 - AluY SINE Alu -27 284 1 722 120 30 135 chr2 40470239 40470289 -210217565 - AluSc SINE Alu -173 136 82 761 290 80 5 chr2 40470387 40470611 -210217243 + MIR SINE MIR 12 252 -10 366 156 0 0 chr2 40470611 40470675 -210217179 + (CTG)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr2 40470952 40470973 -210216881 + AT_rich Low_complexity Low_complexity 1 21 0 211 226 113 57 chr2 40471142 40471248 -210216606 - MIR3 SINE MIR -6 202 91 1224 199 120 10 chr2 40471756 40472057 -210215797 + L1ME3A LINE L1 3862 4195 -1951 689 202 0 8 chr2 40472057 40472181 -210215673 + FLAM_C SINE Alu 1 123 -20 2462 196 39 92 chr2 40472233 40472632 -210215222 + L1ME3A LINE L1 4181 4600 -1546 1691 176 3 10 chr2 40472632 40472922 -210214932 + AluJo SINE Alu 1 288 -24 2462 196 39 92 chr2 40472922 40473226 -210214628 + L1ME3A LINE L1 4600 4830 -1316 2232 133 0 0 chr2 40473226 40473535 -210214319 - AluSx SINE Alu -3 309 1 2462 196 39 92 chr2 40473535 40473714 -210214140 + L1ME3A LINE L1 4830 5017 -1129 232 148 7 67 chr2 40473826 40473975 -210213879 + G-rich Low_complexity Low_complexity 4 143 0 23 33 0 0 chr2 40474467 40474497 -210213357 + AT_rich Low_complexity Low_complexity 1 30 0 1720 173 0 7 chr2 40474799 40475083 -210212771 - AluJo SINE Alu -30 282 1 416 282 138 6 chr2 40475640 40475821 -210212033 - MIR3 SINE MIR -1 207 3 24 32 0 0 chr2 40475981 40476012 -210211842 + AT_rich Low_complexity Low_complexity 1 31 0 651 255 89 31 chr2 40476049 40476526 -210211328 + L1ME3A LINE L1 5377 5950 -220 348 298 48 24 chr2 40476679 40476847 -210211007 - L1M4 LINE L1 -1695 4451 4280 230 344 97 11 chr2 40477351 40477444 -210210410 + L2 LINE L2 3163 3263 -9 2019 99 42 7 chr2 40477490 40477773 -210210081 + AluSg1 SINE Alu 1 293 -16 2570 26 0 23 chr2 40477940 40478246 -210209608 - AluY SINE Alu -12 299 1 28 61 0 0 chr2 40479377 40479426 -210208428 + AT_rich Low_complexity Low_complexity 1 49 0 206 104 21 42 chr2 40480042 40480090 -210207764 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 2085 110 0 29 chr2 40482057 40482366 -210205488 + AluSg SINE Alu 1 300 -10 2009 138 3 0 chr2 40482991 40483288 -210204566 - AluSx SINE Alu -14 298 1 1902 114 0 4 chr2 40483295 40483559 -210204295 - AluSx SINE Alu 0 312 50 24 0 0 0 chr2 40483582 40483606 -210204248 + AT_rich Low_complexity Low_complexity 1 24 0 601 111 37 56 chr2 40483612 40483720 -210204134 - AluJb SINE Alu -195 117 12 28 0 0 0 chr2 40483921 40483949 -210203905 + AT_rich Low_complexity Low_complexity 1 28 0 221 224 237 0 chr2 40484022 40484098 -210203756 - MIR SINE MIR -12 250 157 1024 134 0 0 chr2 40484138 40484287 -210203567 - AluSg/x SINE Alu -8 302 154 395 299 134 0 chr2 40485151 40485308 -210202546 - MIR SINE MIR -13 249 72 285 368 0 21 chr2 40485712 40485807 -210202047 - MIR SINE MIR -149 113 21 1773 164 0 18 chr2 40486276 40486562 -210201292 - AluJo SINE Alu -29 283 3 21 57 0 0 chr2 40487729 40487764 -210200090 + AT_rich Low_complexity Low_complexity 1 35 0 983 188 21 5 chr2 40487900 40488086 -210199768 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr2 40488330 40488351 -210199503 + AT_rich Low_complexity Low_complexity 1 21 0 2474 64 0 13 chr2 40488874 40489187 -210198667 - AluY SINE Alu -2 309 1 573 267 160 11 chr2 40489332 40489519 -210198335 + MIR SINE MIR 44 258 -4 1675 174 20 3 chr2 40489872 40490171 -210197683 + AluJb SINE Alu 1 304 -8 2194 118 3 0 chr2 40490533 40490839 -210197015 - AluSx SINE Alu -5 307 1 268 318 78 36 chr2 40490884 40491076 -210196778 + L2 LINE L2 2325 2524 -790 959 286 20 8 chr2 40491137 40491392 -210196462 + MIR SINE MIR 3 260 -2 294 322 23 0 chr2 40491415 40491502 -210196352 - MER20B DNA MER1_type -642 141 53 1041 161 16 10 chr2 40491502 40491694 -210196160 + L1MB8 LINE L1 5980 6172 -6 305 289 166 86 chr2 40491869 40492218 -210195636 + L2 LINE L2 2844 3220 -52 2216 109 0 3 chr2 40492239 40492532 -210195322 - AluSq SINE Alu -20 293 2 576 125 240 0 chr2 40492563 40492667 -210195187 + AluSg SINE Alu 5 133 -177 1974 113 36 0 chr2 40492667 40492976 -210194878 + AluSq SINE Alu 1 319 0 21 57 0 0 chr2 40493034 40493069 -210194785 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 40493187 40493208 -210194646 + AT_rich Low_complexity Low_complexity 1 21 0 473 164 58 10 chr2 40493729 40493833 -210194021 - MER50 LTR ERV1 -135 599 491 184 358 114 32 chr2 40493957 40494080 -210193774 + MIR SINE MIR 16 148 -114 1524 190 13 20 chr2 40494341 40494641 -210193213 + AluJo SINE Alu 6 303 -9 23 0 0 0 chr2 40494803 40494826 -210193028 + AT_rich Low_complexity Low_complexity 1 23 0 53 49 0 0 chr2 40496434 40496515 -210191339 + AT_rich Low_complexity Low_complexity 1 81 0 2062 125 7 10 chr2 40496579 40496883 -210190971 + AluSx SINE Alu 1 303 -9 1150 155 0 0 chr2 40496886 40497047 -210190807 + AluSx SINE Alu 4 164 -148 438 266 131 54 chr2 40497610 40498313 -210189541 - L1ME3A LINE L1 -318 5852 5131 21 71 0 0 chr2 40498749 40498791 -210189063 + AT_rich Low_complexity Low_complexity 1 42 0 1998 142 10 0 chr2 40498819 40499128 -210188726 - AluSx SINE Alu 0 312 1 24 0 0 51 chr2 40499208 40499231 -210188623 + AT_rich Low_complexity Low_complexity 1 24 -13 2227 100 0 0 chr2 40499231 40499546 -210188308 + AluSg SINE Alu 1 315 0 24 0 0 51 chr2 40499546 40499560 -210188294 + AT_rich Low_complexity Low_complexity 24 37 0 1608 181 4 7 chr2 40499567 40499843 -210188011 - AluJo SINE Alu -21 291 17 2157 122 9 32 chr2 40500734 40501079 -210186775 - MER1B DNA MER1_type 0 337 1 2158 102 3 33 chr2 40501966 40502270 -210185584 - AluSq SINE Alu -18 295 1 2326 64 0 0 chr2 40503438 40503746 -210184108 + AluY SINE Alu 1 308 0 24 85 0 0 chr2 40504226 40504285 -210183569 + AT_rich Low_complexity Low_complexity 1 59 0 2126 114 7 7 chr2 40504470 40504778 -210183076 + AluSx SINE Alu 1 308 -4 2450 105 18 52 chr2 40505184 40505456 -210182398 + L1MA5A LINE L1 5853 6104 -193 1917 97 60 43 chr2 40505456 40505755 -210182099 + AluY SINE Alu 1 304 -7 2450 105 18 52 chr2 40505755 40505940 -210181914 + L1MA5A LINE L1 6104 6294 -3 1590 153 41 17 chr2 40506271 40506565 -210181289 + AluJb SINE Alu 1 301 -11 220 235 0 20 chr2 40506592 40506643 -210181211 - MIR SINE MIR -127 135 86 1378 204 80 47 chr2 40506920 40507282 -210180572 + MLT1B LTR MaLR 5 378 -12 881 148 39 13 chr2 40507645 40507800 -210180054 + FRAM SINE Alu 2 160 -6 541 363 18 18 chr2 40509193 40509433 -210178421 + MIR SINE MIR 15 252 -10 1433 194 46 28 chr2 40509472 40509797 -210178057 + Charlie1b DNA MER1_type 2 332 -191 751 177 83 0 chr2 40509975 40510167 -210177687 + Charlie1b DNA MER1_type 316 523 0 2028 123 7 26 chr2 40510383 40510691 -210177163 - AluSx SINE Alu -10 302 1 385 259 176 0 chr2 40511470 40511640 -210176214 - MIR SINE MIR 0 262 63 2342 92 0 0 chr2 40511780 40512085 -210175769 - AluSq SINE Alu -8 305 1 1957 117 10 10 chr2 40513350 40513650 -210174204 + AluSq SINE Alu 2 301 -12 216 338 14 0 chr2 40513851 40513922 -210173932 + L2 LINE L2 3185 3256 -16 25 0 0 0 chr2 40514332 40514357 -210173497 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr2 40514526 40514558 -210173296 + AT_rich Low_complexity Low_complexity 1 32 0 196 292 82 124 chr2 40515368 40515635 -210172219 + L2 LINE L2 3008 3263 -9 2388 67 0 13 chr2 40516409 40516722 -210171132 + AluSc SINE Alu 1 309 0 2036 126 7 10 chr2 40518200 40518502 -210169352 - AluSx SINE Alu -9 303 3 3845 147 38 35 chr2 40519171 40519908 -210167946 + L1MB3 LINE L1 5445 6183 0 513 299 242 5 chr2 40520007 40520218 -210167636 + MIR SINE MIR 2 262 0 2329 84 3 3 chr2 40520498 40520795 -210167059 - AluSc SINE Alu -12 297 1 276 203 49 32 chr2 40522141 40522264 -210165590 + (TATATG)n Simple_repeat Simple_repeat 4 128 0 29 0 0 0 chr2 40523617 40523646 -210164208 + AT_rich Low_complexity Low_complexity 1 29 0 1134 190 4 18 chr2 40523791 40524017 -210163837 - AluJo SINE Alu -12 300 78 2381 74 0 3 chr2 40524216 40524525 -210163329 - AluY SINE Alu -3 308 1 5193 124 37 37 chr2 40524659 40525581 -210162273 - L1MA4 LINE L1 -20 6280 5359 2177 106 0 3 chr2 40525743 40526046 -210161808 - AluSx SINE Alu -10 302 1 1612 189 174 21 chr2 40526101 40526525 -210161329 + MLT1F LTR MaLR 1 489 -53 339 291 108 7 chr2 40526533 40526681 -210161173 + L1MEc LINE L1 1655 1817 -4579 296 221 59 0 chr2 40526752 40526820 -210161034 + MLT1F LTR MaLR 496 567 0 196 358 49 12 chr2 40527549 40527630 -210160224 + L2 LINE L2 3103 3186 -86 1342 121 14 14 chr2 40527879 40528102 -210159752 - L1PA13 LINE L1 0 6163 5941 438 130 11 22 chr2 40528111 40528203 -210159651 + CT-rich Low_complexity Low_complexity 1 91 0 1729 138 0 8 chr2 40528213 40528481 -210159373 - AluSx SINE Alu -46 266 1 1827 164 3 0 chr2 40528705 40528997 -210158857 - AluSx SINE Alu -19 293 1 275 305 54 36 chr2 40529398 40529565 -210158289 - MER5A DNA MER1_type -1 188 19 289 311 67 30 chr2 40529411 40529546 -210158308 + MER5B DNA MER1_type 15 154 -24 366 221 267 15 chr2 40529570 40529701 -210158153 + MER5A DNA MER1_type 7 170 -19 21 0 0 0 chr2 40530182 40530203 -210157651 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 40530522 40530566 -210157288 + AT_rich Low_complexity Low_complexity 1 44 0 24 0 0 0 chr2 40530714 40530738 -210157116 + AT_rich Low_complexity Low_complexity 1 24 0 5325 110 46 16 chr2 40531567 40533077 -210154777 + L1PA15 LINE L1 4628 6165 0 1183 167 5 18 chr2 40533588 40533809 -210154045 + MER20 DNA MER1_type 1 218 -1 942 191 176 10 chr2 40534017 40534221 -210153633 - MER8 DNA MER2_type 0 239 2 190 286 0 0 chr2 40534699 40534748 -210153106 + L2 LINE L2 3024 3072 -241 841 56 112 0 chr2 40535011 40535136 -210152718 + MER85 DNA T2_type 1 139 0 291 290 131 9 chr2 40535760 40535825 -210152029 - MIR SINE MIR -50 212 156 7968 57 4 5 chr2 40535825 40536795 -210151059 + LTR5 LTR ERVK 1 969 0 291 290 131 9 chr2 40536795 40536886 -210150968 - MIR SINE MIR -106 156 40 237 132 0 0 chr2 40537255 40537293 -210150561 + (TG)n Simple_repeat Simple_repeat 2 39 0 222 128 0 0 chr2 40537284 40537323 -210150531 + (TA)n Simple_repeat Simple_repeat 2 40 0 * 2232 123 0 0 chr2 40537325 40537633 -210150221 - AluSx SINE Alu 0 312 5 1124 167 35 0 chr2 40538114 40538312 -210149542 + Tigger6 DNA MER2_type 2 206 -877 1589 137 72 75 chr2 40538323 40538710 -210149144 + Tigger6 DNA MER2_type 1212 1597 0 2199 114 7 0 chr2 40538795 40539102 -210148752 + AluSg SINE Alu 1 309 -1 769 142 0 39 chr2 40539652 40539779 -210148075 - FLAM_C SINE Alu -16 127 6 222 150 0 0 chr2 40540111 40540151 -210147703 + (CATA)n Simple_repeat Simple_repeat 4 43 0 1128 89 5 47 chr2 40541136 40541326 -210146528 + THE1C-int LTR MaLR 1399 1580 0 1484 148 81 32 chr2 40541326 40541636 -210146218 + THE1C LTR MaLR 1 325 -50 181 271 86 43 chr2 40541844 40541914 -210145940 + L2 LINE L2 1841 1913 -1401 2037 145 0 0 chr2 40542716 40543026 -210144828 + AluJb SINE Alu 1 310 -2 705 227 63 47 chr2 40543133 40543397 -210144457 + L1ME1 LINE L1 5893 6155 -9 517 336 139 46 chr2 40544069 40544501 -210143353 + HAL1 LINE L1 163 634 -1873 280 330 10 0 chr2 40544506 40544609 -210143245 + HAL1 LINE L1 780 883 -1624 1232 253 194 30 chr2 40544670 40545310 -210142544 + HAL1 LINE L1 1178 1922 -585 220 335 96 54 chr2 40546042 40546209 -210141645 - L2 LINE L2 -424 2890 2717 24 32 0 0 chr2 40548299 40548330 -210139524 + AT_rich Low_complexity Low_complexity 1 31 0 351 0 0 0 chr2 40548629 40548668 -210139186 + (TG)n Simple_repeat Simple_repeat 2 40 0 879 317 105 29 chr2 40549390 40550068 -210137786 - L2 LINE L2 -25 3288 2557 2266 103 3 3 chr2 40550857 40551169 -210136685 + AluSx SINE Alu 1 312 0 468 116 0 0 chr2 40551369 40551438 -210136416 + L1MB7 LINE L1 6108 6176 -8 1970 148 10 10 chr2 40552420 40552730 -210135124 - AluJo SINE Alu -2 310 1 468 225 0 0 chr2 40552750 40552839 -210135015 + L2 LINE L2 3225 3313 0 1446 182 70 52 chr2 40553326 40553656 -210134198 + MLT1A1 LTR MaLR 22 357 -8 616 315 97 17 chr2 40553981 40554330 -210133524 + L1MEd LINE L1 3 379 -5740 396 242 55 0 chr2 40554490 40554618 -210133236 + L1MEd LINE L1 602 736 -5383 524 274 135 17 chr2 40555396 40555758 -210132096 + L1MEd LINE L1 851 1255 -4864 459 276 29 38 chr2 40555784 40555994 -210131860 + HAL1 LINE L1 1417 1624 -883 2251 96 3 0 chr2 40556044 40556337 -210131517 + AluSg SINE Alu 1 294 -16 1892 131 33 0 chr2 40556776 40557097 -210130757 - AluSx SINE Alu 0 330 1 200 329 49 12 chr2 40557614 40557696 -210130158 + L2 LINE L2 3227 3311 -2 297 337 0 11 chr2 40558810 40558902 -210128952 + L2 LINE L2 3180 3270 -2 1397 186 14 101 chr2 40558931 40559297 -210128557 + MER58B DNA MER1_type 3 336 -5 194 375 142 21 chr2 40559344 40559584 -210128270 - L2 LINE L2 -173 3099 2831 244 329 47 0 chr2 40559614 40559699 -210128155 - L3 LINE CR1 -406 1171 1083 1186 173 6 138 chr2 40559759 40560100 -210127754 + AluJo SINE Alu 2 297 -5 2542 61 0 10 chr2 40560305 40560616 -210127238 + AluY SINE Alu 1 308 -3 257 153 68 0 chr2 40560706 40560765 -210127089 + Charlie1 DNA MER1_type 2625 2687 -74 550 323 57 30 chr2 40560824 40561087 -210126767 - L3 LINE CR1 -510 1067 798 1153 187 29 29 chr2 40561642 40561883 -210125971 + Charlie1 DNA MER1_type 2 242 -2519 736 118 0 56 chr2 40561866 40562010 -210125844 + Charlie1 DNA MER1_type 2622 2757 -4 * 206 225 127 0 chr2 40562149 40562220 -210125634 + MIR SINE MIR 180 259 -3 216 213 0 62 chr2 40562264 40562344 -210125510 + (CTTAA)n Simple_repeat Simple_repeat 1 75 0 27 29 0 0 chr2 40562388 40562422 -210125432 + AT_rich Low_complexity Low_complexity 1 34 0 326 346 90 48 chr2 40562425 40562613 -210125241 - L3 LINE CR1 -1197 380 185 21 0 0 0 chr2 40563591 40563612 -210124242 + AT_rich Low_complexity Low_complexity 1 21 0 311 263 74 11 chr2 40564180 40564275 -210123579 - MER103 DNA DNA -6 160 60 371 371 6 6 chr2 40564288 40564455 -210123399 + GA-rich Low_complexity Low_complexity 2 168 0 1058 201 23 27 chr2 40564632 40564851 -210123003 + MER20 DNA MER1_type 2 219 0 886 144 40 45 chr2 40564909 40565131 -210122723 + L1MD3 LINE L1 7765 7985 -10 228 276 31 87 chr2 40565308 40565435 -210122419 + L2 LINE L2 2586 2705 -609 917 158 120 5 chr2 40565661 40565845 -210122009 - MER2 DNA MER2_type -139 206 2 230 286 63 40 chr2 40566054 40566180 -210121674 + L2 LINE L2 3093 3221 -92 2106 122 0 7 chr2 40566350 40566638 -210121216 - AluSx SINE Alu -26 286 1 1720 119 4 4 chr2 40566722 40566974 -210120880 + AluSg SINE Alu 45 296 -14 305 311 72 44 chr2 40567745 40567925 -210119929 + MIR3 SINE MIR 18 202 -6 21 0 0 0 chr2 40568094 40568115 -210119739 + AT_rich Low_complexity Low_complexity 1 21 0 366 156 0 0 chr2 40568392 40568456 -210119398 + (CAG)n Simple_repeat Simple_repeat 2 65 0 788 291 81 0 chr2 40568456 40568679 -210119175 - MIR SINE MIR -10 252 12 1303 105 0 28 chr2 40568777 40568829 -210119025 + AluSc SINE Alu 82 134 -175 2266 74 3 3 chr2 40568829 40569135 -210118719 + AluY SINE Alu 1 306 0 1303 105 0 28 chr2 40569135 40569262 -210118592 + AluSc SINE Alu 134 257 -52 499 106 0 0 chr2 40569262 40569360 -210118494 + AluSg/x SINE Alu 216 313 0 1662 154 57 34 chr2 40569630 40569750 -210118104 + AluJb SINE Alu 1 117 -195 2033 116 10 3 chr2 40569750 40570051 -210117803 + AluSc SINE Alu 1 303 -6 1662 154 57 34 chr2 40570051 40570228 -210117626 + AluJb SINE Alu 117 305 -7 1108 203 48 12 chr2 40571193 40571444 -210116410 + MIR SINE MIR 3 262 0 301 249 11 34 chr2 40572751 40572875 -210114979 + MLT1L LTR MaLR 474 609 0 190 314 231 0 chr2 40572914 40573035 -210114819 + L2 LINE L2 3165 3313 0 883 101 14 22 chr2 40573464 40573602 -210114252 - THE1C LTR MaLR -238 137 1 10257 94 31 61 chr2 40573602 40575231 -210112623 - THE1C-int LTR MaLR 0 1580 1 2390 116 22 11 chr2 40575231 40575602 -210112252 - THE1C LTR MaLR 0 375 1 347 336 30 38 chr2 40575700 40575831 -210112023 + MIR SINE MIR 7 136 -126 56 61 0 0 chr2 40576323 40576421 -210111433 + AT_rich Low_complexity Low_complexity 1 98 0 4323 190 68 28 chr2 40576916 40578053 -210109801 + L1MB1 LINE L1 4150 5331 -815 2123 135 0 3 chr2 40578053 40578357 -210109497 + AluSx SINE Alu 1 303 -9 430 209 59 40 chr2 40578362 40578498 -210109356 + L1MA9 LINE L1 6178 6307 -5 1921 141 38 35 chr2 40578513 40578882 -210108972 + L1MB1 LINE L1 5324 5693 -475 839 226 20 0 chr2 40578882 40579080 -210108774 + L1MB1 LINE L1 5958 6160 -8 1059 123 82 6 chr2 40579082 40579253 -210108601 - MER4E LTR ERV1 -2 777 594 2134 124 7 0 chr2 40579253 40579552 -210108302 + AluSx SINE Alu 1 301 -11 3150 123 54 20 chr2 40579552 40580088 -210107766 - MER4D LTR ERV1 -348 555 2 2917 3 0 0 chr2 40580098 40580411 -210107443 - AluYb8 SINE Alu -5 313 1 2729 115 36 83 chr2 40580705 40581354 -210106500 - MER4B LTR ERV1 0 779 1 1679 203 7 0 chr2 40581927 40582237 -210105617 + AluJb SINE Alu 1 312 0 439 212 177 0 chr2 40582292 40582405 -210105449 + FLAM_A SINE Alu 1 133 0 423 105 76 114 chr2 40582437 40582542 -210105312 - MER106B DNA MER1_type -57 1002 902 1885 157 3 10 chr2 40583052 40583358 -210104496 + AluJo SINE Alu 1 304 -8 1229 123 0 0 chr2 40583861 40584031 -210103823 - AluSx SINE Alu -10 300 131 595 75 0 0 chr2 40584034 40584114 -210103740 - AluSx SINE Alu -232 80 1 259 351 80 21 chr2 40584166 40584354 -210103500 + L2 LINE L2 2837 3035 -237 1979 208 57 5 chr2 40585722 40586145 -210101709 - LTR65 LTR ERV1 0 669 225 429 222 30 20 chr2 40586145 40586244 -210101610 + Tigger4(Zombi) DNA MER2_type 1 100 -2631 869 198 46 5 chr2 40586247 40586464 -210101390 + L1MA3 LINE L1 2178 2403 -3743 238 245 0 61 chr2 40586480 40586578 -210101276 - L1MC4 LINE L1 -1339 6703 6612 23 0 0 0 chr2 40586579 40586602 -210101252 + AT_rich Low_complexity Low_complexity 1 23 0 6568 132 17 19 chr2 40586604 40588779 -210099075 + L1MA3 LINE L1 4138 6305 0 1722 134 82 0 chr2 40588779 40589047 -210098807 + AluSx SINE Alu 13 302 -10 37 18 0 18 chr2 40589047 40589067 -210098787 + AT_rich Low_complexity Low_complexity 1 20 -34 2185 101 0 7 chr2 40589067 40589363 -210098491 + AluSx SINE Alu 1 294 -18 37 18 0 18 chr2 40589363 40589397 -210098457 + AT_rich Low_complexity Low_complexity 20 54 0 1531 189 25 0 chr2 40589647 40589922 -210097932 + AluJo SINE Alu 1 282 -30 413 232 93 57 chr2 40590002 40590196 -210097658 + L1MC5 LINE L1 7305 7505 -456 2003 197 150 21 chr2 40590275 40590855 -210096999 - L1MB8 LINE L1 -3 6175 5521 321 278 68 21 chr2 40590876 40591093 -210096761 + L1ME4a LINE L1 5979 6093 -28 221 304 0 25 chr2 40591210 40591289 -210096565 - L2 LINE L2 -16 3256 3180 186 250 50 0 chr2 40591361 40591401 -210096453 - L2 LINE L2 -200 3072 3031 319 224 9 122 chr2 40591802 40591909 -210095945 + MER58C DNA MER1_type 121 215 0 372 276 63 31 chr2 40592292 40592419 -210095435 - MIR3 SINE MIR -76 132 2 21 0 0 0 chr2 40592876 40592897 -210094957 + AT_rich Low_complexity Low_complexity 1 21 0 1180 230 15 23 chr2 40592989 40593250 -210094604 - MIR SINE MIR -2 260 2 290 237 32 0 chr2 40593492 40593585 -210094269 + (TA)n Simple_repeat Simple_repeat 1 96 0 1907 176 52 8 chr2 40595473 40595585 -210092269 - L1MB7 LINE L1 -8 6176 6065 960 221 138 32 chr2 40595585 40595956 -210091898 - L1MC4 LINE L1 -1986 6056 5647 * 1522 165 77 32 chr2 40595945 40596376 -210091478 - L1MB8 LINE L1 -775 5371 4922 347 290 55 52 chr2 40597051 40597246 -210090608 + MIR3 SINE MIR 14 203 -5 185 324 69 39 chr2 40597370 40597472 -210090382 - MER5A DNA MER1_type -83 106 2 220 333 42 0 chr2 40597386 40597458 -210090396 + MER5B DNA MER1_type 100 174 -4 2235 147 22 0 chr2 40597808 40598175 -210089679 - THE1C LTR MaLR 0 375 1 242 122 0 24 chr2 40598454 40598495 -210089359 + MER58A DNA MER1_type 45 84 -23 1765 153 3 31 chr2 40598502 40598796 -210089058 + AluJo SINE Alu 13 298 -14 535 188 31 0 chr2 40598798 40598894 -210088960 + MER58A DNA MER1_type 126 224 0 2265 118 0 0 chr2 40598931 40599244 -210088610 + AluSq SINE Alu 1 313 0 774 181 0 0 chr2 40599246 40599379 -210088475 + MER3 DNA MER1_type 1 133 -76 3081 200 96 43 chr2 40599444 40600219 -210087635 - L1ME1 LINE L1 -24 6142 5409 386 20 20 0 chr2 40600219 40600270 -210087584 + (TA)n Simple_repeat Simple_repeat 2 53 0 3081 200 96 43 chr2 40600270 40600299 -210087555 - L1ME1 LINE L1 -757 5409 5383 2310 103 0 7 chr2 40600299 40600599 -210087255 - AluSq SINE Alu -15 298 1 3081 200 96 43 chr2 40600599 40600661 -210087193 - L1ME1 LINE L1 -783 5383 5326 2081 186 3 13 chr2 40600661 40601053 -210086801 + MLT1B LTR MaLR 3 390 0 3081 200 96 43 chr2 40601053 40601473 -210086381 - L1ME1 LINE L1 -840 5326 4930 2037 142 6 10 chr2 40601473 40601784 -210086070 - AluSx SINE Alu -2 310 1 3081 200 96 43 chr2 40601784 40602114 -210085740 - L1ME1 LINE L1 -1236 4930 4439 282 197 66 0 chr2 40602116 40602177 -210085677 + MER3 DNA MER1_type 144 208 -1 247 293 0 0 chr2 40602133 40602191 -210085663 - MER3 DNA MER1_type -117 92 35 * 22 0 0 0 chr2 40602550 40602572 -210085282 + AT_rich Low_complexity Low_complexity 1 22 0 1155 263 120 63 chr2 40602937 40604545 -210083309 + L1MEd LINE L1 6 1580 -4551 291 252 111 83 chr2 40604759 40604972 -210082882 + MER20B DNA MER1_type 1 214 -5 328 316 25 32 chr2 40605039 40605197 -210082657 - MER5A DNA MER1_type -30 159 3 24 0 0 0 chr2 40605431 40605455 -210082399 + AT_rich Low_complexity Low_complexity 1 24 0 2494 63 0 13 chr2 40605741 40606056 -210081798 + AluY SINE Alu 1 311 0 474 268 14 7 chr2 40606057 40606195 -210081659 - MER103 DNA DNA -24 142 4 426 235 12 0 chr2 40606262 40606347 -210081507 + L2 LINE L2 3185 3270 -2 596 213 102 35 chr2 40606354 40606551 -210081303 + MER63A DNA MER1_type 1 210 0 2355 82 0 13 chr2 40606568 40606873 -210080981 + AluSc SINE Alu 1 301 -8 1924 203 53 0 chr2 40607280 40607654 -210080200 + MSTD LTR MaLR 3 396 0 33 0 0 0 chr2 40608183 40608216 -210079638 + AT_rich Low_complexity Low_complexity 1 33 0 557 58 0 0 chr2 40608216 40608285 -210079569 - U6 snRNA snRNA -37 70 2 1045 215 75 26 chr2 40608378 40608606 -210079248 + MER8 DNA MER2_type 1 239 0 210 375 25 17 chr2 40608959 40609079 -210078775 - L2 LINE L2 -653 2661 2541 318 106 0 0 chr2 40609980 40610027 -210077827 + (CA)n Simple_repeat Simple_repeat 2 48 0 1806 169 7 13 chr2 40610699 40611006 -210076848 - AluJo SINE Alu -7 305 1 2386 61 24 0 chr2 40611146 40611440 -210076414 - AluY SINE Alu -10 301 1 679 326 66 10 chr2 40611939 40612350 -210075504 + L1MC4a LINE L1 4273 4706 -1440 892 221 122 61 chr2 40612464 40613085 -210074769 + L1MC4a LINE L1 5268 5926 -1882 28 29 0 0 chr2 40613253 40613288 -210074566 + AT_rich Low_complexity Low_complexity 1 35 0 384 88 0 0 chr2 40613372 40613429 -210074425 + (TAA)n Simple_repeat Simple_repeat 2 58 0 2097 128 13 13 chr2 40613430 40613735 -210074119 + AluSx SINE Alu 1 305 -7 235 299 103 21 chr2 40614888 40614985 -210072869 + L2 LINE L2 2552 2656 -658 374 320 133 22 chr2 40615089 40615451 -210072403 - L1 LINE L1 -2867 3279 2878 2196 277 97 20 chr2 40615657 40616185 -210071669 + L1MEc LINE L1 162 648 -5748 1561 187 3 10 chr2 40616185 40616485 -210071369 + AluJb SINE Alu 1 298 -14 2196 277 97 20 chr2 40616485 40617131 -210070723 + L1MEc LINE L1 648 1426 -4970 1089 215 67 100 chr2 40617142 40617840 -210070014 + L1MEc LINE L1 3024 3698 -2517 * 17136 136 43 27 chr2 40617839 40619277 -210068577 + L1M1 LINE L1 12 1426 -6139 2366 103 3 0 chr2 40619277 40619588 -210068266 - AluSp SINE Alu -1 312 1 17136 136 43 27 chr2 40619588 40620254 -210067600 + L1M1 LINE L1 1426 2080 -5485 1844 172 3 13 chr2 40620254 40620562 -210067292 + AluJb SINE Alu 1 305 -7 17136 136 43 27 chr2 40620562 40621550 -210066304 + L1M1 LINE L1 2080 3154 -4411 1147 241 104 11 chr2 40621537 40622006 -210065848 + L1MEc LINE L1 3668 4180 -2035 * 9715 118 44 41 chr2 40622006 40622218 -210065636 + Tigger2 DNA MER2_type 965 1175 -1543 1677 188 0 40 chr2 40622218 40622542 -210065312 - AluJb SINE Alu 0 312 2 9715 118 44 41 chr2 40622542 40624077 -210063777 + Tigger2 DNA MER2_type 1175 2717 -1 611 192 0 0 chr2 40624115 40624214 -210063640 + FLAM_A SINE Alu 1 99 -43 215 364 15 0 chr2 40626112 40626178 -210061676 - L2 LINE L2 -5 3267 3201 451 303 8 8 chr2 40627007 40627139 -210060715 - L2 LINE L2 -15 3298 3167 503 312 98 30 chr2 40627344 40627578 -210060276 - MIR SINE MIR 0 262 13 189 309 48 48 chr2 40627935 40628019 -210059835 - MIR SINE MIR -73 135 52 2132 102 0 7 chr2 40629261 40629556 -210058298 + AluY SINE Alu 1 293 -18 2407 97 0 3 chr2 40630337 40630648 -210057206 + AluSx SINE Alu 1 310 -2 225 0 0 0 chr2 40630648 40630673 -210057181 + (TA)n Simple_repeat Simple_repeat 2 26 0 284 125 0 0 chr2 40630775 40630823 -210057031 + L1MB8 LINE L1 6130 6177 -1 815 258 57 16 chr2 40631482 40631730 -210056124 + MIR SINE MIR 2 259 -3 3015 205 127 92 chr2 40631812 40631875 -210055979 + L1MC3 LINE L1 6397 6456 -1329 2377 84 3 0 chr2 40631875 40632185 -210055669 - AluY SINE Alu 0 311 1 3015 205 127 92 chr2 40632185 40632588 -210055266 + L1MC3 LINE L1 6456 6843 -942 2150 119 0 10 chr2 40632588 40632890 -210054964 + AluSc SINE Alu 1 299 -10 3015 205 127 92 chr2 40632890 40633114 -210054740 + L1MC3 LINE L1 6843 7058 -727 355 237 32 21 chr2 40633114 40633207 -210054647 + MLT1B LTR MaLR 37 130 -437 3015 205 127 92 chr2 40633207 40633764 -210054090 + L1MC3 LINE L1 7058 7785 0 22 35 0 0 chr2 40633983 40634012 -210053842 + AT_rich Low_complexity Low_complexity 1 29 0 1873 156 20 7 chr2 40635078 40635380 -210052474 - AluJo SINE Alu -6 306 1 851 206 22 119 chr2 40635931 40636045 -210051809 + MIR SINE MIR 1 125 -137 786 173 0 0 chr2 40636045 40636178 -210051676 - FLAM_C SINE Alu 0 133 1 851 206 22 119 chr2 40636178 40636340 -210051514 + MIR SINE MIR 125 250 -12 1074 164 15 0 chr2 40637061 40637256 -210050598 + MLT1B LTR MaLR 193 390 0 5352 200 84 73 chr2 40637256 40638618 -210049236 + L1MC4 LINE L1 4817 6162 -1880 2520 58 0 0 chr2 40638618 40638911 -210048943 - AluSx SINE Alu -19 293 1 5352 200 84 73 chr2 40638911 40639215 -210048639 + L1MC4 LINE L1 6162 6461 -1581 1982 153 0 3 chr2 40639215 40639522 -210048332 + AluJo SINE Alu 1 306 -6 5352 200 84 73 chr2 40639522 40640055 -210047799 + L1MC4 LINE L1 6461 6987 -1055 1324 207 102 12 chr2 40640055 40640398 -210047456 + MLT1A2 LTR MaLR 1 374 0 5352 200 84 73 chr2 40640398 40641379 -210046475 + L1MC4 LINE L1 6987 8031 -11 288 259 103 62 chr2 40641536 40641926 -210045928 + L1MCa LINE L1 1454 1916 -871 2183 80 7 30 chr2 40643060 40643360 -210044494 + AluSq SINE Alu 1 293 -20 2442 73 10 0 chr2 40643455 40643757 -210044097 + AluSg SINE Alu 1 305 -5 478 234 39 0 chr2 40643962 40644090 -210043764 + L1ME2 LINE L1 4464 4596 -1550 590 199 90 32 chr2 40644103 40644337 -210043517 + L1MD3 LINE L1 6115 7985 -10 1144 217 29 0 chr2 40644341 40644618 -210043236 + L1ME2 LINE L1 4599 4883 -1263 310 240 90 40 chr2 40644621 40644721 -210043133 + L1ME2 LINE L1 5911 6015 -149 921 67 0 0 chr2 40644721 40644841 -210043013 - THE1B LTR MaLR 0 364 245 24 0 0 0 chr2 40645185 40645209 -210042645 + AT_rich Low_complexity Low_complexity 1 24 0 660 215 140 27 chr2 40645637 40645823 -210042031 - L2 LINE L2 0 3313 3107 303 233 0 0 chr2 40645832 40645892 -210041962 + MER69 DNA AcHobo 8 67 -1159 568 172 97 0 chr2 40646033 40646167 -210041687 + MER69 DNA AcHobo 2380 2526 0 434 254 71 46 chr2 40646184 40646381 -210041473 - L2 LINE L2 -225 3088 2887 609 149 119 37 chr2 40646477 40646611 -210041243 - MIR SINE MIR -115 147 3 193 242 32 0 chr2 40647082 40647144 -210040710 - L3b LINE CR1 -200 1383 1320 415 202 22 0 chr2 40647674 40647763 -210040091 + MER103 DNA DNA 7 97 -69 195 191 115 0 chr2 40648618 40648666 -210039188 - MIR SINE MIR -89 119 66 762 236 192 0 chr2 40649328 40649536 -210038318 + MIR SINE MIR 15 262 0 425 313 215 24 chr2 40649804 40650453 -210037401 + L2 LINE L2 2544 3305 -8 189 74 0 0 chr2 40651781 40651808 -210036046 + (CCG)n Simple_repeat Simple_repeat 3 29 0 30 0 0 0 chr2 40651849 40651879 -210035975 + GC_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 40653357 40653382 -210034472 + AT_rich Low_complexity Low_complexity 1 25 0 2252 109 0 3 chr2 40653705 40654009 -210033845 - AluSp SINE Alu -10 303 1 457 311 101 0 chr2 40654453 40654601 -210033253 - L3 LINE CR1 -23 1554 1392 740 243 150 0 chr2 40654632 40654858 -210032996 - MIR SINE MIR 0 262 3 217 313 0 73 chr2 40654916 40655012 -210032842 - L2 LINE L2 -31 3241 3153 2391 81 3 3 chr2 40655084 40655391 -210032463 + AluSx SINE Alu 1 307 -5 28 0 0 0 chr2 40655933 40655961 -210031893 + AT_rich Low_complexity Low_complexity 1 28 0 2133 112 0 14 chr2 40655961 40656256 -210031598 + AluSx SINE Alu 1 291 -21 579 152 0 18 chr2 40656279 40656391 -210031463 - L1MA9 LINE L1 -5 6307 6198 294 279 76 0 chr2 40656541 40656620 -210031234 + MIR SINE MIR 23 107 -155 207 136 45 23 chr2 40656665 40656709 -210031145 + MIR SINE MIR 218 262 0 2390 90 10 0 chr2 40656729 40657039 -210030815 - AluSp SINE Alu 0 313 1 214 395 120 8 chr2 40657112 40657494 -210030360 - L2 LINE L2 -663 2651 2227 2390 124 22 8 chr2 40657518 40657888 -210029966 + THE1C LTR MaLR 1 375 0 1765 191 3 7 chr2 40658100 40658393 -210029461 - AluJb SINE Alu -20 292 1 229 238 159 24 chr2 40658586 40658712 -210029142 - MER20B DNA MER1_type -604 179 37 284 324 9 19 chr2 40658989 40659094 -210028760 - L2 LINE L2 -191 3081 2978 530 334 0 76 chr2 40659134 40659436 -210028418 - L2 LINE L2 -455 2859 2581 496 290 99 36 chr2 40659704 40660069 -210027785 + LTR16B LTR ERVL 53 440 -24 232 308 92 8 chr2 40660096 40660216 -210027638 - L2 LINE L2 -1298 2016 1887 449 297 126 19 chr2 40660241 40660510 -210027344 - L3 LINE CR1 -331 1246 949 4142 112 28 121 chr2 40660984 40661431 -210026423 + Tigger3(Golem) DNA MER2_type 3 490 -2539 755 167 0 0 chr2 40661431 40661551 -210026303 + FLAM_C SINE Alu 3 122 -11 4142 112 28 121 chr2 40661551 40661755 -210026099 + Tigger3(Golem) DNA MER2_type 490 712 -2317 470 250 0 0 chr2 40661755 40661843 -210026011 + FLAM_A SINE Alu 2 89 -53 4142 112 28 121 chr2 40661843 40661948 -210025906 + Tigger3(Golem) DNA MER2_type 712 825 -2204 1842 171 0 10 chr2 40661948 40662241 -210025613 + AluJo SINE Alu 12 301 -11 4142 112 28 121 chr2 40662241 40662727 -210025127 + Tigger3(Golem) DNA MER2_type 825 3029 0 2380 89 3 0 chr2 40663258 40663561 -210024293 + AluSg SINE Alu 1 304 -6 2324 82 0 3 chr2 40663568 40663874 -210023980 + AluY SINE Alu 1 305 -6 2130 48 45 4 chr2 40663883 40664182 -210023672 + AluY SINE Alu 1 310 0 2041 103 45 3 chr2 40664358 40664650 -210023204 - AluSc SINE Alu -5 304 1 2199 115 0 3 chr2 40664742 40665037 -210022817 - AluSq SINE Alu -19 294 1 2330 97 3 0 chr2 40666332 40666616 -210021238 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr2 40666616 40666639 -210021215 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2330 97 3 0 chr2 40666639 40666654 -210021200 + AluSx SINE Alu 288 301 -11 236 312 73 9 chr2 40666861 40666970 -210020884 - MIR SINE MIR -46 216 101 252 268 37 49 chr2 40667008 40667090 -210020764 - L2 LINE L2 -16 3256 3176 670 177 95 20 chr2 40667292 40667439 -210020415 + FRAM SINE Alu 11 168 -8 664 327 50 13 chr2 40667471 40667850 -210020004 + L1ME3A LINE L1 5558 5950 -220 1825 150 3 55 chr2 40668294 40668621 -210019233 - AluJo SINE Alu 0 312 1 224 217 98 76 chr2 40668755 40668847 -210019007 + L2 LINE L2 3179 3272 -41 2305 71 0 10 chr2 40669128 40669423 -210018431 + AluY SINE Alu 3 294 -17 251 226 84 84 chr2 40670940 40671070 -210016784 + L1ME1 LINE L1 2197 2326 -4100 2345 82 3 10 chr2 40671070 40671373 -210016481 + AluSp SINE Alu 1 301 -12 251 226 84 84 chr2 40671373 40671503 -210016351 + L1ME1 LINE L1 2325 2457 -3969 2422 268 94 20 chr2 40671516 40672456 -210015398 + L1ME1 LINE L1 2423 3477 -2949 1488 203 17 7 chr2 40672456 40672746 -210015108 + AluJb SINE Alu 1 293 -19 2422 268 94 20 chr2 40672746 40673037 -210014817 + L1ME1 LINE L1 3477 3745 -2681 3776 205 51 27 chr2 40673069 40673136 -210014718 + L1ME1 LINE L1 5312 5376 -1070 333 0 0 0 chr2 40673136 40673173 -210014681 + (CA)n Simple_repeat Simple_repeat 2 38 0 3776 205 51 27 chr2 40673173 40673207 -210014647 + L1ME1 LINE L1 5376 5408 -1038 700 212 8 0 chr2 40673207 40673339 -210014515 + FLAM_C SINE Alu 1 133 0 3776 205 51 27 chr2 40673339 40674013 -210013841 + L1ME1 LINE L1 5408 6110 -336 2019 126 17 0 chr2 40674013 40674306 -210013548 + AluSq SINE Alu 1 298 -15 3776 205 51 27 chr2 40674306 40674646 -210013208 + L1ME1 LINE L1 6110 6441 -5 1080 253 106 3 chr2 40674640 40674952 -210012902 + L1ME3A LINE L1 5296 5639 -531 * 1460 223 78 21 chr2 40674975 40675143 -210012711 + L1ME3A LINE L1 5756 5913 -257 2307 82 0 0 chr2 40675143 40675457 -210012397 + AluSc SINE Alu 1 314 0 1460 223 78 21 chr2 40675457 40675669 -210012185 + L1ME3A LINE L1 5913 6159 -11 300 346 31 8 chr2 40675953 40676083 -210011771 + L1MB7 LINE L1 5692 5824 -297 252 272 88 35 chr2 40676305 40676419 -210011435 - LTR67 LTR ERVL -4 553 434 2054 124 44 0 chr2 40676523 40676821 -210011033 + AluSx SINE Alu 1 311 -1 388 244 110 73 chr2 40676875 40677039 -210010815 - MLT1K LTR MaLR -411 177 8 237 83 0 28 chr2 40677203 40677239 -210010615 - MLT1F LTR MaLR -8 559 525 586 191 180 10 chr2 40677248 40677442 -210010412 + L1MB7 LINE L1 5953 6179 -5 498 224 8 96 chr2 40677451 40677554 -210010300 - MER81 DNA DNA 0 114 22 2430 92 7 0 chr2 40677554 40677860 -210009994 + AluSq SINE Alu 1 308 -5 498 224 8 96 chr2 40677860 40677881 -210009973 - MER81 DNA DNA -92 22 1 1341 227 118 6 chr2 40677881 40678186 -210009668 - MLT1F LTR MaLR -32 510 168 1106 184 61 54 chr2 40678279 40678573 -210009281 - AluJo SINE Alu -6 306 11 397 233 92 98 chr2 40678591 40678754 -210009100 - MLT1F LTR MaLR -380 162 1 2341 102 0 3 chr2 40678769 40679072 -210008782 - AluSx SINE Alu -10 302 1 494 284 204 4 chr2 40679148 40679423 -210008431 - L1ME LINE L1 -411 5710 5381 192 125 0 0 chr2 40679478 40679510 -210008344 + (TA)n Simple_repeat Simple_repeat 2 33 0 479 332 33 51 chr2 40679700 40680034 -210007820 - L2 LINE L2 -436 2878 2551 1223 270 42 15 chr2 40680235 40680568 -210007286 + LTR16A LTR ERVL 16 357 -93 263 212 15 15 chr2 40680570 40680636 -210007218 + CT-rich Low_complexity Low_complexity 4 69 0 532 172 0 11 chr2 40680670 40680757 -210007097 + LTR16A LTR ERVL 360 445 -5 232 327 187 23 chr2 40680996 40681253 -210006601 - L2 LINE L2 -778 2536 2238 258 256 79 67 chr2 40681316 40681522 -210006332 + HAL1 LINE L1 916 1129 -1378 2489 90 0 0 chr2 40681522 40681832 -210006022 + AluSx SINE Alu 1 310 -2 258 256 79 67 chr2 40681832 40681941 -210005913 + HAL1 LINE L1 1129 1235 -1272 436 328 57 57 chr2 40682047 40682501 -210005353 - L2 LINE L2 -1641 1673 1220 4373 89 5 16 chr2 40682847 40683407 -210004447 + MER41A LTR ERV1 1 554 0 339 239 64 28 chr2 40683421 40683530 -210004324 + L2 LINE L2 3200 3312 -1 537 30 0 0 chr2 40685111 40685178 -210002676 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 1021 288 119 23 chr2 40685284 40686043 -210001811 - L1MC4a LINE L1 -749 5397 5054 1072 237 60 8 chr2 40686091 40686357 -210001497 + L2 LINE L2 2581 2860 -454 223 179 0 0 chr2 40686356 40686395 -210001459 + MIR SINE MIR 217 255 -7 * 317 258 138 12 chr2 40686433 40686653 -210001201 + L1ME LINE L1 5475 5719 -447 500 290 30 84 chr2 40686743 40687040 -210000814 - L1MC4a LINE L1 -2197 3949 3669 334 48 26 12 chr2 40687052 40687102 -210000752 - MER41B LTR ERV1 -88 547 515 2287 97 0 31 chr2 40687102 40687421 -210000433 + AluSc SINE Alu 1 309 0 334 48 26 12 chr2 40687421 40687457 -210000397 - MER41B LTR ERV1 -120 515 481 308 280 79 90 chr2 40687460 40687665 -210000189 - L1MC4a LINE L1 -2409 3737 3531 2323 87 3 0 chr2 40687665 40687963 -209999891 + AluSp SINE Alu 1 299 -14 308 280 79 90 chr2 40687963 40688154 -209999700 - L1MC4a LINE L1 -2615 3531 3339 1978 116 0 51 chr2 40688154 40688477 -209999377 - AluSg SINE Alu 0 309 2 308 280 79 90 chr2 40688477 40688512 -209999342 - L1MC4a LINE L1 -2807 3339 3305 1996 145 0 7 chr2 40688512 40688815 -209999039 + AluJb SINE Alu 1 301 -11 308 280 79 90 chr2 40688815 40688942 -209998912 - L1MC4a LINE L1 -2841 3305 3178 1471 190 84 16 chr2 40688942 40689263 -209998591 + MER2 DNA MER2_type 1 343 -1 308 280 79 90 chr2 40689263 40689295 -209998559 - L1MC4a LINE L1 -2968 3178 3147 432 37 0 0 chr2 40689295 40689349 -209998505 + (TG)n Simple_repeat Simple_repeat 2 55 0 308 280 79 90 chr2 40689349 40689438 -209998416 - L1MC4a LINE L1 -2999 3147 3060 2194 126 0 3 chr2 40689480 40689782 -209998072 + AluSg SINE Alu 1 301 -9 2182 117 0 3 chr2 40690002 40690300 -209997554 + AluSq SINE Alu 1 297 -16 201 121 0 0 chr2 40690571 40690604 -209997250 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 182 337 120 23 chr2 40691138 40691571 -209996283 + L2 LINE L2 1846 2320 -994 2080 128 0 0 chr2 40691637 40691918 -209995936 - AluSx SINE Alu -31 281 1 2797 147 21 7 chr2 40692462 40692884 -209994970 + MSTA LTR MaLR 1 428 0 194 317 0 0 chr2 40693490 40693550 -209994304 + L2 LINE L2 2992 3051 -221 267 190 122 21 chr2 40694519 40694615 -209993239 + MIR SINE MIR 32 148 -60 2319 87 10 3 chr2 40694919 40695230 -209992624 + AluSq SINE Alu 1 313 0 288 0 0 0 chr2 40695419 40695451 -209992403 + (TA)n Simple_repeat Simple_repeat 2 33 0 2122 102 10 3 chr2 40695451 40695745 -209992109 - AluSp SINE Alu -17 296 1 22 88 0 0 chr2 40695966 40696023 -209991831 + AT_rich Low_complexity Low_complexity 1 57 0 833 166 40 0 chr2 40696023 40696174 -209991680 - L1MA7 LINE L1 0 6291 6135 260 284 20 10 chr2 40696245 40696347 -209991507 + (TATATG)n Simple_repeat Simple_repeat 6 108 0 2038 91 33 4 chr2 40696836 40697142 -209990712 - AluSq SINE Alu 0 314 1 259 240 19 0 chr2 40697229 40697333 -209990521 + (TA)n Simple_repeat Simple_repeat 2 107 0 1762 175 10 13 chr2 40697349 40697652 -209990202 - AluJo SINE Alu -10 302 1 2161 161 17 61 chr2 40698779 40699189 -209988665 + MSTD LTR MaLR 3 394 -2 1996 103 78 7 chr2 40700284 40700566 -209987288 - AluSx SINE Alu -10 302 1 237 290 0 16 chr2 40701302 40701364 -209986490 + GA-rich Low_complexity Low_complexity 2 62 0 948 126 0 0 chr2 40701486 40701637 -209986217 + (TC)n Simple_repeat Simple_repeat 2 152 0 2267 93 0 0 chr2 40701639 40701919 -209985935 - AluSx SINE Alu -32 280 1 279 306 14 0 chr2 40702594 40702666 -209985188 + polypyrimidine Low_complexity Low_complexity 1 73 0 1298 165 169 8 chr2 40702845 40703111 -209984743 - 7SLRNA srpRNA srpRNA -11 309 1 1786 174 10 0 chr2 40703238 40703532 -209984322 - AluJb SINE Alu -15 297 1 2257 102 7 0 chr2 40703545 40703850 -209984004 - AluSx SINE Alu -5 307 1 427 262 153 16 chr2 40703877 40704060 -209983794 - L1M4 LINE L1 -351 5811 5604 2187 99 3 0 chr2 40704213 40704507 -209983347 - AluY SINE Alu -15 296 2 2200 128 0 0 chr2 40704546 40704844 -209983010 + AluSx SINE Alu 1 298 -14 2291 120 3 0 chr2 40704945 40705253 -209982601 + AluSx SINE Alu 1 309 -3 2254 115 0 0 chr2 40705537 40705832 -209982022 - AluSx SINE Alu -13 299 5 2224 78 24 7 chr2 40705894 40706187 -209981667 - AluY SINE Alu -11 300 3 278 253 0 24 chr2 40706492 40706575 -209981279 + MIR SINE MIR 182 262 0 490 131 48 0 chr2 40707929 40708013 -209979841 - L1MA9 LINE L1 0 6312 6225 204 250 0 0 chr2 40708015 40708063 -209979791 + (TA)n Simple_repeat Simple_repeat 2 49 0 260 136 169 0 chr2 40708065 40708124 -209979730 + L1MA9 LINE L1 6225 6293 -19 225 121 17 52 chr2 40708124 40708182 -209979672 + (TA)n Simple_repeat Simple_repeat 2 57 0 285 51 0 0 chr2 40708182 40708221 -209979633 - L1MA9 LINE L1 -119 6193 6155 194 146 0 24 chr2 40708221 40708262 -209979592 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 2883 166 14 4 chr2 40708263 40708758 -209979096 - L1MA9 LINE L1 -148 6164 5665 2121 113 24 0 chr2 40708758 40709049 -209978805 - AluSx SINE Alu -14 298 1 2206 135 0 0 chr2 40709154 40709465 -209978389 + AluSx SINE Alu 2 312 0 338 273 35 43 chr2 40709986 40710146 -209977708 - MIR SINE MIR -46 162 13 1212 153 157 32 chr2 40710550 40710950 -209976904 - AluJo SINE Alu 0 433 3 715 140 9 9 chr2 40711243 40711357 -209976497 - FLAM_A SINE Alu -17 125 12 231 188 0 0 chr2 40711587 40711635 -209976219 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 646 183 58 0 chr2 40711899 40712003 -209975851 - FLAM_A SINE Alu -32 110 1 7740 38 5 0 chr2 40712497 40713371 -209974483 + L1PA5 LINE L1 5271 6148 -6 369 227 0 0 chr2 40713783 40713858 -209973996 - MER63 DNA MER1_type -9 1051 977 329 279 47 0 chr2 40713860 40713946 -209973908 - MER63 DNA MER1_type -94 742 27 1109 206 52 28 chr2 40714079 40714327 -209973527 - MLT1D LTR MaLR 0 505 252 192 179 0 0 chr2 40714378 40714417 -209973437 + (TG)n Simple_repeat Simple_repeat 1 39 0 645 198 26 73 chr2 40714435 40714627 -209973227 - MLT1D LTR MaLR -322 183 1 2014 100 75 0 chr2 40714698 40714978 -209972876 - AluY SINE Alu -10 301 1 249 33 0 0 chr2 40716122 40716152 -209971702 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 203 61 30 0 chr2 40716153 40716186 -209971668 + (TC)n Simple_repeat Simple_repeat 1 34 0 1129 172 0 0 chr2 40716196 40716365 -209971489 - FAM SINE Alu -5 170 2 261 75 0 0 chr2 40716368 40716408 -209971446 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 2315 123 0 0 chr2 40716408 40716718 -209971136 - AluSq SINE Alu -2 311 2 366 242 117 16 chr2 40716722 40716850 -209971004 + MIR SINE MIR 122 262 0 1827 179 28 11 chr2 40716867 40717225 -209970629 + MLT1A1 LTR MaLR 1 364 -1 417 288 107 19 chr2 40717879 40718084 -209969770 - MIR SINE MIR -39 223 1 1867 150 0 35 chr2 40718092 40718405 -209969449 - AluJb SINE Alu -10 302 1 273 57 0 0 chr2 40718532 40718567 -209969287 + (A)n Simple_repeat Simple_repeat 1 35 0 2203 128 3 3 chr2 40718569 40718874 -209968980 + AluSq SINE Alu 1 305 -8 430 220 193 27 chr2 40718882 40719032 -209968822 - MER96 DNA MER1_type 0 175 1 319 157 12 72 chr2 40719070 40719153 -209968701 - LTR41 LTR ERVL 0 773 696 259 210 48 0 chr2 40720244 40720306 -209967548 + MER5B DNA MER1_type 1 65 -113 641 165 15 38 chr2 40720331 40720464 -209967390 + FLAM_C SINE Alu 11 140 -3 2117 130 0 13 chr2 40720588 40720903 -209966951 + AluSx SINE Alu 1 311 -1 1030 196 126 0 chr2 40721619 40721818 -209966036 - MER58A DNA MER1_type 0 224 1 720 276 71 4 chr2 40721985 40722210 -209965644 - MIR SINE MIR -3 259 20 1741 209 139 20 chr2 40722389 40722849 -209965005 + LTR40a LTR ERVL 5 519 0 365 317 55 24 chr2 40723144 40723308 -209964546 + MER5A DNA MER1_type 2 170 -19 1041 206 25 0 chr2 40723413 40723617 -209964237 - MER3 DNA MER1_type 0 209 1 939 149 25 113 chr2 40723619 40723901 -209963953 + L1MC5 LINE L1 6796 7052 -909 373 312 32 38 chr2 40724018 40724175 -209963679 + LTR16C LTR ERVL 336 491 0 180 0 0 0 chr2 40724814 40724834 -209963020 + (CTGGGG)n Simple_repeat Simple_repeat 1 20 0 659 248 108 6 chr2 40724990 40725147 -209962707 + MER63A DNA MER1_type 5 177 -33 2466 85 3 3 chr2 40725448 40725755 -209962099 - AluSp SINE Alu -6 307 1 275 179 15 0 chr2 40728635 40728702 -209959152 + (TG)n Simple_repeat Simple_repeat 1 68 0 298 307 69 53 chr2 40729118 40729307 -209958547 + MIR SINE MIR 20 211 -51 241 268 24 12 chr2 40729742 40729824 -209958030 + MER5A DNA MER1_type 1 83 -106 2241 201 84 33 chr2 40733502 40733832 -209954022 + MER119 DNA MER1_type 8 379 -204 1856 87 4 0 chr2 40733832 40734061 -209953793 - AluSc SINE Alu -16 293 64 2241 201 84 33 chr2 40734061 40734278 -209953576 + MER119 DNA MER1_type 379 583 0 465 173 314 59 chr2 40734481 40734551 -209953303 - MER5C DNA MER1_type -4 320 269 2022 164 41 50 chr2 40734551 40734967 -209952887 + MLT2D LTR ERVL 3 414 0 465 173 314 59 chr2 40734967 40735151 -209952703 - MER5C DNA MER1_type -55 269 1 213 235 0 0 chr2 40735168 40735219 -209952635 + (TA)n Simple_repeat Simple_repeat 2 52 0 735 162 18 24 chr2 40735220 40735387 -209952467 - L1MD3 LINE L1 -14 7981 7816 2194 135 127 16 chr2 40735393 40735778 -209952076 - MSTA LTR MaLR 0 428 1 8169 151 89 30 chr2 40735778 40737254 -209950600 - MSTA-int LTR MaLR 0 1580 17 2051 144 152 8 chr2 40737259 40737633 -209950221 - MSTA LTR MaLR 0 428 1 262 342 58 0 chr2 40738162 40738282 -209949572 + L2 LINE L2 3146 3272 0 246 238 25 25 chr2 40739826 40739906 -209947948 + MIR SINE MIR 165 244 -18 877 303 176 40 chr2 40740653 40741044 -209946810 + L2 LINE L2 1708 2045 -1227 2141 107 45 0 chr2 40741044 40741333 -209946521 - AluSx SINE Alu -10 302 1 877 303 176 40 chr2 40741333 40741940 -209945914 + L2 LINE L2 2045 2568 -704 2528 70 0 0 chr2 40741940 40742240 -209945614 - AluY SINE Alu -11 300 1 877 303 176 40 chr2 40742240 40742604 -209945250 + L2 LINE L2 2568 3271 -1 2431 81 0 0 chr2 40742714 40743011 -209944843 - AluY SINE Alu -14 297 1 215 406 0 9 chr2 40743224 40743330 -209944524 - L3 LINE CR1 -2 1575 1471 * 353 299 117 39 chr2 40743322 40743548 -209944306 - MIR SINE MIR -1 261 17 798 102 0 0 chr2 40743548 40743666 -209944188 + (CTATG)n Simple_repeat Simple_repeat 5 122 0 268 336 67 0 chr2 40743739 40743858 -209943996 - L3 LINE CR1 -211 1366 1240 267 116 116 29 chr2 40743883 40743952 -209943902 - L1ME4a LINE L1 -3 6118 6044 294 321 0 19 chr2 40744015 40744121 -209943733 - L3 LINE CR1 -607 970 867 1671 159 24 0 chr2 40744251 40744503 -209943351 - AluSx SINE Alu -54 258 1 498 350 138 35 chr2 40744511 40745077 -209942777 - L3 LINE CR1 -740 837 214 191 224 75 30 chr2 40745897 40745964 -209941890 + L2 LINE L2 3141 3210 -62 2068 152 8 37 chr2 40746116 40746337 -209941517 - MLT1A1 LTR MaLR 0 365 158 2405 85 0 7 chr2 40746337 40746642 -209941212 - AluSc SINE Alu -6 303 1 2068 152 8 37 chr2 40746642 40746796 -209941058 - MLT1A1 LTR MaLR -207 158 1 295 188 0 25 chr2 40746995 40747075 -209940779 + (CCCTAA)n Simple_repeat Simple_repeat 5 82 0 715 209 95 0 chr2 40747604 40747762 -209940092 - MER45A DNA AcHobo -5 173 1 256 248 80 80 chr2 40747767 40747904 -209939950 - MIR3 SINE MIR -69 139 3 880 193 74 72 chr2 40750738 40750811 -209937043 - L1MC5 LINE L1 -23 7938 7867 2250 96 0 3 chr2 40750811 40751102 -209936752 + AluSx SINE Alu 3 292 -20 880 193 74 72 chr2 40751102 40751459 -209936395 - L1MC5 LINE L1 -94 7867 7507 2526 155 39 45 chr2 40751466 40751977 -209935877 - L1MD3 LINE L1 0 7995 7488 2364 155 15 10 chr2 40752070 40752087 -209935767 - MER57A LTR ERV1 0 403 388 2113 133 10 0 chr2 40752087 40752396 -209935458 + AluSx SINE Alu 1 312 0 2364 155 15 10 chr2 40752396 40752779 -209935075 - MER57A LTR ERV1 -15 388 1 2211 131 0 0 chr2 40753097 40753402 -209934452 + AluSx SINE Alu 1 305 -7 1749 157 56 85 chr2 40753462 40753907 -209933947 - MSTB1 LTR MaLR 0 432 1 205 244 78 44 chr2 40754161 40754251 -209933603 - MIR SINE MIR -74 134 42 446 229 41 65 chr2 40756652 40756822 -209931032 + MIR3 SINE MIR 9 174 -34 461 242 75 134 chr2 40757945 40758251 -209929603 - MLT1I LTR MaLR -26 383 96 2744 147 9 71 chr2 40758447 40758796 -209929058 + L1MB7 LINE L1 5652 5956 -228 2233 119 0 13 chr2 40758796 40759106 -209928748 + AluSx SINE Alu 5 310 -2 2744 147 9 71 chr2 40759106 40759308 -209928546 + L1MB7 LINE L1 5956 6169 -15 1561 124 127 8 chr2 40760236 40760495 -209927359 - AluSg1 SINE Alu -13 296 7 361 153 0 0 chr2 40761476 40761535 -209926319 - L1MB2 LINE L1 -3 6168 6110 248 215 0 46 chr2 40761610 40761675 -209926179 + L2 LINE L2 3251 3312 -1 358 287 11 88 chr2 40762113 40762294 -209925560 + MER5B DNA MER1_type 8 174 -4 732 239 6 0 chr2 40762374 40762537 -209925317 - MER5B DNA MER1_type 0 178 15 2303 173 64 25 chr2 40762557 40762997 -209924857 + LTR32 LTR ERVL 15 471 0 267 258 103 62 chr2 40763001 40763071 -209924783 + MER5A DNA MER1_type 58 135 -54 4038 139 30 16 chr2 40763071 40763761 -209924093 - L1MB2 LINE L1 -11 6160 5461 267 258 103 62 chr2 40763761 40763787 -209924067 + MER5A DNA MER1_type 135 158 -31 2257 122 0 3 chr2 40764758 40765069 -209922785 + AluJb SINE Alu 1 310 -2 240 269 21 21 chr2 40766333 40766426 -209921428 - MLT1J LTR MaLR -4 507 415 770 286 126 14 chr2 40766433 40766727 -209921127 - HERVL LTR ERVL -3005 2649 2323 6867 131 23 7 chr2 40766739 40768781 -209919073 - L1MA8 LINE L1 0 6291 4220 1835 313 103 26 chr2 40768781 40769913 -209917941 - HERVL LTR ERVL -3420 2344 1096 1553 113 26 22 chr2 40770161 40770264 -209917590 - MER30 DNA MER1_type 0 230 129 2217 107 0 19 chr2 40770264 40770574 -209917280 - AluSg SINE Alu -5 305 2 1553 113 26 22 chr2 40770574 40770699 -209917155 - MER30 DNA MER1_type -101 129 1 1464 164 125 21 chr2 40771052 40771332 -209916522 - AluJb SINE Alu -3 309 1 342 271 59 8 chr2 40771654 40771772 -209916082 - LTR67 LTR ERVL -3 554 431 414 328 30 52 chr2 40771869 40772101 -209915753 - LTR67 LTR ERVL -293 264 38 751 158 94 170 chr2 40772229 40772283 -209915571 - MLT2B1 LTR ERVL 0 520 464 2262 92 3 3 chr2 40772283 40772577 -209915277 + AluSp SINE Alu 1 294 -19 751 158 94 170 chr2 40772577 40772589 -209915265 - MLT2B1 LTR ERVL -56 464 453 192 40 0 0 chr2 40772589 40772614 -209915240 + (TA)n Simple_repeat Simple_repeat 1 25 0 751 158 94 170 chr2 40772614 40773049 -209914805 - MLT2B1 LTR ERVL -67 453 1 355 259 35 12 chr2 40774079 40774164 -209913690 + MIR SINE MIR 20 106 -156 4973 125 16 36 chr2 40774235 40774570 -209913284 - L1MA4A LINE L1 -1 6302 5962 2282 111 0 0 chr2 40774570 40774867 -209912987 - AluSx SINE Alu -15 297 1 4973 125 16 36 chr2 40774867 40775240 -209912614 - L1MA4A LINE L1 -341 5962 5611 1614 181 7 20 chr2 40775240 40775544 -209912310 - AluJo SINE Alu -12 300 1 4973 125 16 36 chr2 40775544 40775658 -209912196 - L1MA4A LINE L1 -692 5611 5496 8967 200 35 41 chr2 40775671 40776080 -209911774 - L1 LINE L1 -2616 4232 3822 2468 86 0 0 chr2 40776080 40776383 -209911471 - AluSx SINE Alu -9 303 1 8967 200 35 41 chr2 40776383 40777138 -209910716 - L1 LINE L1 -3026 3822 3065 1473 201 15 4 chr2 40777138 40777406 -209910448 - AluJb SINE Alu -39 273 3 8967 200 35 41 chr2 40777406 40779384 -209908470 - L1 LINE L1 -3783 3065 1103 180 0 0 0 chr2 40779384 40779404 -209908450 + (CTG)n Simple_repeat Simple_repeat 1 20 0 8967 200 35 41 chr2 40779404 40779661 -209908193 - L1 LINE L1 -5745 1103 846 415 282 75 17 chr2 40779737 40779911 -209907943 - LTR67 LTR ERVL -2 555 372 201 214 161 0 chr2 40781750 40781806 -209906048 + MIR SINE MIR 11 75 -187 243 88 0 0 chr2 40782655 40782689 -209905165 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 891 139 29 0 chr2 40782707 40782844 -209905010 - AluJo SINE Alu -171 141 1 1260 165 100 117 chr2 40784016 40784385 -209903469 + MLT1A1 LTR MaLR 1 363 -2 553 239 18 0 chr2 40784385 40784493 -209903361 - MER81 DNA DNA -1 113 3 282 338 92 14 chr2 40784610 40784752 -209903102 + MIR3 SINE MIR 17 169 -39 438 329 64 26 chr2 40784847 40785081 -209902773 - MIR SINE MIR -11 251 9 404 295 118 89 chr2 40786132 40786580 -209901274 + L2 LINE L2 2812 3272 0 180 237 0 0 chr2 40786598 40786636 -209901218 - L2 LINE L2 -10 3303 3266 2235 121 6 18 chr2 40786810 40787052 -209900802 - MER2 DNA MER2_type -10 335 97 4709 114 2 12 chr2 40787052 40787694 -209900160 - MER41B LTR ERV1 0 635 1 2235 121 6 18 chr2 40787694 40787790 -209900064 - MER2 DNA MER2_type -248 97 1 2255 96 0 10 chr2 40788344 40788635 -209899219 - AluSg SINE Alu -20 290 3 1630 184 0 54 chr2 40788642 40788957 -209898897 - AluJo SINE Alu -14 298 1 2217 113 3 10 chr2 40789068 40789379 -209898475 - AluSx SINE Alu -3 309 1 24 32 0 0 chr2 40789394 40789425 -209898429 + AT_rich Low_complexity Low_complexity 1 31 0 195 42 0 0 chr2 40789659 40789683 -209898171 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 43085 55 3 1 chr2 40789685 40795819 -209892035 - L1PA5 LINE L1 0 6154 11 2248 98 0 0 chr2 40795989 40796276 -209891578 + AluSc SINE Alu 1 287 -22 5512 136 38 24 chr2 40796299 40797290 -209890564 - L1MA4 LINE L1 -6 6294 5290 3180 159 5 10 chr2 40797297 40797877 -209889977 - L1 LINE L1 -775 5371 4795 244 352 37 37 chr2 40797941 40798049 -209889805 - MIR SINE MIR -62 146 39 629 321 87 0 chr2 40798377 40798595 -209889259 - MIR SINE MIR -20 242 6 712 121 0 0 chr2 40799758 40799849 -209888005 - AluSx SINE Alu -15 295 205 4198 135 98 92 chr2 40799850 40801229 -209886625 + pTR5 LTR ERV1 385 714 0 1319 106 106 0 chr2 40801229 40801418 -209886436 - AluSx SINE Alu -103 209 1 22 0 0 0 chr2 40801424 40801446 -209886408 + AT_rich Low_complexity Low_complexity 1 22 0 264 262 16 0 chr2 40801545 40801606 -209886248 + CT-rich Low_complexity Low_complexity 2 63 0 488 256 131 60 chr2 40801811 40802124 -209885730 - L1ME3A LINE L1 -264 5906 5575 2140 120 3 7 chr2 40803423 40803723 -209884131 - AluSx SINE Alu -13 299 1 1758 179 10 17 chr2 40803752 40804053 -209883801 + AluJb SINE Alu 1 299 -13 213 264 57 0 chr2 40804055 40804108 -209883746 - L3 LINE CR1 -8 1569 1514 267 241 0 0 chr2 40804108 40804162 -209883692 - MLT1H1 LTR MaLR 0 555 502 183 152 0 0 chr2 40804181 40804227 -209883627 + T-rich Low_complexity Low_complexity 1 46 0 3580 39 2 0 chr2 40804230 40804636 -209883218 - L1PA3 LINE L1 -3 6152 5746 597 198 114 28 chr2 40804769 40805009 -209882845 - MLT1H LTR MaLR -263 292 17 231 288 76 0 chr2 40805641 40805707 -209882147 + MER5A DNA MER1_type 119 189 0 1378 143 13 67 chr2 40805879 40806179 -209881675 - L1MB8 LINE L1 0 6178 5895 403 293 136 7 chr2 40806765 40806905 -209880949 - MIR3 SINE MIR -9 199 42 2244 120 7 0 chr2 40807133 40807441 -209880413 - AluSx SINE Alu -2 310 1 835 166 183 0 chr2 40807461 40807630 -209880224 - MER3 DNA MER1_type -4 205 6 508 281 91 41 chr2 40807639 40807860 -209879994 + MIR SINE MIR 29 260 -2 2236 116 6 3 chr2 40807896 40808207 -209879647 + AluSx SINE Alu 1 312 0 365 306 30 55 chr2 40809130 40809170 -209878684 + MIR3 SINE MIR 6 45 -163 1792 141 10 52 chr2 40809170 40809475 -209878379 - AluJo SINE Alu -20 292 1 365 306 30 55 chr2 40809475 40809633 -209878221 + MIR3 SINE MIR 45 199 -9 842 189 38 16 chr2 40809685 40809870 -209877984 + MER53 DNA DNA 1 189 0 411 318 64 92 chr2 40811039 40811210 -209876644 + L2 LINE L2 2817 2991 -281 2415 86 0 3 chr2 40811210 40811512 -209876342 - AluSp SINE Alu -12 301 1 411 318 64 92 chr2 40811512 40811808 -209876046 + L2 LINE L2 2991 3271 -1 571 253 69 17 chr2 40812405 40812579 -209875275 + MIR3 SINE MIR 20 202 -6 4905 202 51 95 chr2 40812591 40813658 -209874196 + MER69 DNA AcHobo 1 988 -1538 2190 133 0 0 chr2 40813658 40813967 -209873887 - AluSg SINE Alu -1 309 1 4905 202 51 95 chr2 40813967 40814356 -209873498 + MER69 DNA AcHobo 988 1393 -1133 1584 215 102 24 chr2 40814372 40814912 -209872942 + MER69 DNA AcHobo 1945 2526 0 453 196 399 0 chr2 40814926 40815059 -209872795 - MER5A DNA MER1_type 0 189 4 308 301 98 24 chr2 40815070 40815193 -209872661 - MER5A DNA MER1_type 0 189 58 421 228 0 0 chr2 40815203 40815282 -209872572 + L1ME LINE L1 5510 5588 -2220 284 191 85 64 chr2 40815297 40815391 -209872463 - LTR50 LTR ERVL -675 120 25 328 325 64 0 chr2 40815403 40815582 -209872272 + L1ME LINE L1 5600 5796 -325 2445 52 0 52 chr2 40815885 40816213 -209871641 + AluY SINE Alu 1 311 0 441 240 32 81 chr2 40816578 40816799 -209871055 - L1MC4 LINE L1 -2 8040 7831 3113 203 41 26 chr2 40816846 40817579 -209870275 - L1ME2 LINE L1 -10 6154 5411 23 0 0 0 chr2 40817600 40817623 -209870231 + AT_rich Low_complexity Low_complexity 1 23 0 3750 259 124 26 chr2 40817630 40819068 -209868786 - L1MC4 LINE L1 -3 8039 6460 688 268 32 5 chr2 40820201 40820391 -209867463 + MER117 DNA MER1_type 2 196 -1 338 281 62 25 chr2 40820575 40820735 -209867119 - MIR SINE MIR -6 256 91 397 284 71 30 chr2 40820789 40820958 -209866896 + MER5B DNA MER1_type 1 176 -2 270 357 136 14 chr2 40820981 40821194 -209866660 - MIR SINE MIR -4 258 20 294 311 25 33 chr2 40821692 40821814 -209866040 - L3 LINE CR1 -9 1568 1448 1981 93 0 19 chr2 40821816 40822084 -209865770 + AluSc SINE Alu 42 304 -5 539 231 37 0 chr2 40824774 40824882 -209862972 - MER81 DNA DNA -2 112 1 801 112 0 0 chr2 40825340 40825447 -209862407 - AluSg/x SINE Alu -13 296 190 386 312 40 8 chr2 40878608 40878733 -209809121 + L2 LINE L2 2229 2357 -957 249 348 37 14 chr2 40878787 40878988 -209808866 + L2 LINE L2 2211 2472 -842 228 337 186 12 chr2 40879090 40879262 -209808592 + L2 LINE L2 2691 2892 -422 244 343 79 28 chr2 40879319 40879497 -209808357 + L2 LINE L2 2837 3023 -249 523 286 161 14 chr2 40879620 40879837 -209808017 - MIR SINE MIR -13 249 1 28 107 0 0 chr2 40880372 40880484 -209807370 + AT_rich Low_complexity Low_complexity 1 112 0 2157 123 0 0 chr2 40880560 40880853 -209807001 - AluSg SINE Alu -15 295 3 36 53 0 0 chr2 40880903 40880960 -209806894 + AT_rich Low_complexity Low_complexity 1 57 0 2818 3 0 0 chr2 40882720 40883023 -209804831 + AluYa5 SINE Alu 1 303 -8 2025 109 4 0 chr2 40884817 40885083 -209802771 + AluSx SINE Alu 1 267 -45 298 356 11 23 chr2 40887125 40887302 -209800552 - MIR SINE MIR 0 262 88 305 149 35 0 chr2 40888927 40889041 -209798813 + (TA)n Simple_repeat Simple_repeat 2 119 0 3179 144 40 62 chr2 40889297 40889915 -209797939 + MER6A DNA MER2_type 1 605 0 1481 211 14 11 chr2 40890395 40890674 -209797180 + AluJb SINE Alu 1 280 -32 2144 90 47 17 chr2 40890885 40891184 -209796670 + AluSx SINE Alu 1 308 -4 521 93 9 75 chr2 40891673 40891780 -209796074 + L1MC5 LINE L1 7300 7399 -562 2303 95 10 0 chr2 40891792 40892088 -209795766 - AluSx SINE Alu -13 299 1 288 286 20 41 chr2 40892257 40892355 -209795499 + MER5A DNA MER1_type 92 187 -2 465 348 82 10 chr2 40892526 40892733 -209795121 - MIR SINE MIR -17 245 24 276 265 129 30 chr2 40892852 40892984 -209794870 + MIR SINE MIR 117 261 -1 327 313 40 27 chr2 40893136 40893286 -209794568 - L3b LINE CR1 -174 1409 1258 830 250 42 24 chr2 40893426 40893638 -209794216 + MIR SINE MIR 46 261 -1 238 273 0 39 chr2 40894047 40894124 -209793730 - MIR SINE MIR -44 218 145 444 123 0 0 chr2 40894734 40894807 -209793047 + (GGGAGA)n Simple_repeat Simple_repeat 1 73 0 465 201 157 30 chr2 40894896 40895030 -209792824 - MIR3 SINE MIR -14 194 44 222 200 0 0 chr2 40895539 40895584 -209792270 + C-rich Low_complexity Low_complexity 4 48 0 1963 117 0 0 chr2 40895681 40895962 -209791892 - AluJb SINE Alu -11 301 21 203 349 110 7 chr2 40897760 40897906 -209789948 + L2 LINE L2 2898 3058 -214 2006 119 154 5 chr2 40898226 40898596 -209789258 - MSTA LTR MaLR -2 426 2 504 48 0 0 chr2 40898949 40899012 -209788842 + (CA)n Simple_repeat Simple_repeat 1 63 0 281 233 17 0 chr2 40899019 40899079 -209788775 + LTR67 LTR ERVL 497 557 0 24 53 0 0 chr2 40900649 40900687 -209787167 + AT_rich Low_complexity Low_complexity 1 38 0 1908 119 11 0 chr2 40901853 40902114 -209785740 + AluSx SINE Alu 29 292 -20 6127 146 43 52 chr2 40902605 40903505 -209784349 + Tigger3b DNA MER2_type 2 889 -2139 221 57 29 0 chr2 40903505 40903540 -209784314 + (CTCA)n Simple_repeat Simple_repeat 3 38 0 6127 146 43 52 chr2 40903540 40903880 -209783974 + Tigger3b DNA MER2_type 889 1231 0 21 71 0 0 chr2 40904193 40904235 -209783619 + AT_rich Low_complexity Low_complexity 1 42 0 2374 90 3 0 chr2 40904235 40904536 -209783318 - AluSp SINE Alu -11 302 1 291 222 80 108 chr2 40904562 40904738 -209783116 + L3b LINE CR1 1115 1285 -298 933 130 35 75 chr2 40905091 40905138 -209782716 - L1MB2 LINE L1 0 6171 6124 2134 111 7 7 chr2 40905138 40905436 -209782418 - AluSq SINE Alu -15 298 1 933 130 35 75 chr2 40905436 40905506 -209782348 - L1MB2 LINE L1 -47 6124 6053 5511 154 20 34 chr2 40905506 40906592 -209781262 - MER11C LTR ERVK 0 1071 1 933 130 35 75 chr2 40906592 40906673 -209781181 - L1MB2 LINE L1 -118 6053 5980 224 261 174 0 chr2 40906739 40906808 -209781046 + L2 LINE L2 3230 3310 -3 657 153 0 3 chr2 40906842 40906954 -209780900 - LTR12 LTR ERV1 0 714 175 275 231 44 33 chr2 40906956 40907047 -209780807 - LTR30 LTR ERV1 -79 643 552 312 133 93 13 chr2 40907047 40907122 -209780732 - LTR12 LTR ERV1 -429 285 205 1276 130 88 5 chr2 40907161 40907377 -209780477 - LTR12 LTR ERV1 -480 234 1 475 256 26 0 chr2 40907525 40907642 -209780212 - MER5B DNA MER1_type -19 159 40 280 278 117 39 chr2 40907719 40907899 -209779955 + MLT1L LTR MaLR 198 391 -224 183 80 0 0 chr2 40907912 40907937 -209779917 + (A)n Simple_repeat Simple_repeat 1 25 0 430 240 67 101 chr2 40908393 40908601 -209779253 - L2 LINE L2 0 3313 3113 212 311 33 0 chr2 40909049 40909110 -209778744 - L2 LINE L2 -50 3263 3201 2686 96 64 10 chr2 40910900 40911306 -209776548 - MSTA LTR MaLR 0 428 1 1613 105 26 4 chr2 40911590 40912030 -209775824 + LTR54 LTR ERV1 1 510 0 633 299 4 58 chr2 40912573 40912834 -209775020 - MIR SINE MIR -13 249 3 7322 48 0 0 chr2 40912982 40914024 -209773830 - L1PA6 LINE L1 -2 6152 5111 893 238 84 0 chr2 40914270 40914472 -209773382 - MER58A DNA MER1_type 0 224 6 1290 172 109 8 chr2 40914506 40914744 -209773110 + MER1B DNA MER1_type 1 262 -77 441 180 180 0 chr2 40914744 40914844 -209773010 + MIR SINE MIR 28 145 -117 561 278 69 60 chr2 40915088 40915524 -209772330 - HAL1 LINE L1 -838 1669 1230 241 308 145 31 chr2 40916846 40917005 -209770849 + L3b LINE CR1 1388 1564 -19 2126 153 71 5 chr2 40917564 40917957 -209769897 - MSTB LTR MaLR 0 426 8 425 164 15 0 chr2 40918060 40918127 -209769727 - Alu SINE Alu -26 284 217 749 273 110 57 chr2 40918239 40918283 -209769571 - L1MDa LINE L1 -4136 2174 2134 1711 139 17 28 chr2 40918283 40918571 -209769283 + AluSx SINE Alu 1 285 -27 201 74 0 0 chr2 40918571 40918598 -209769256 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 749 273 110 57 chr2 40918598 40919779 -209768075 - L1MDa LINE L1 -4176 2134 844 10585 204 24 11 chr2 40919779 40923072 -209764782 - L1PA15 LINE L1 -3 6813 3460 749 273 110 57 chr2 40923072 40923091 -209764763 - L1MDa LINE L1 -5466 844 827 28906 113 11 55 chr2 40923106 40929529 -209758325 - L1PA7 LINE L1 -11 6143 13 3799 239 43 29 chr2 40929542 40930461 -209757393 - L1PA15 LINE L1 -3325 3472 2568 2235 130 0 13 chr2 40930461 40930777 -209757077 + AluSx SINE Alu 1 312 0 3799 239 43 29 chr2 40930777 40930871 -209756983 - L1PA15 LINE L1 -4229 2568 2477 2876 102 18 27 chr2 40930871 40931310 -209756544 + L1PA11 LINE L1 5739 6173 -1 3799 239 43 29 chr2 40931310 40932548 -209755306 - L1PA15 LINE L1 -4320 2477 1185 400 367 45 45 chr2 40932647 40933023 -209754831 - L1MDa LINE L1 -5295 824 449 496 321 141 12 chr2 40933680 40934007 -209753847 - L2 LINE L2 -1348 1966 1598 1691 200 25 28 chr2 40934137 40934492 -209753362 - MLT1A1 LTR MaLR 0 365 12 2240 112 0 0 chr2 40935087 40935383 -209752471 + AluSq SINE Alu 1 296 -17 387 0 0 0 chr2 40935395 40935438 -209752416 + (TA)n Simple_repeat Simple_repeat 2 44 0 808 250 126 32 chr2 40935751 40935908 -209751946 + HsTC2 DNA Tc2 1161 1302 -596 1009 202 0 6 chr2 40935908 40936081 -209751773 - FAM SINE Alu -3 172 1 808 250 126 32 chr2 40936081 40936303 -209751551 + HsTC2 DNA Tc2 1302 1752 -146 668 242 102 9 chr2 40936368 40936583 -209751271 - L1MC/D LINE L1 -1992 5816 5582 909 266 31 12 chr2 40938224 40938396 -209749458 + MIR SINE MIR 2 182 -80 1358 198 39 94 chr2 40938396 40938780 -209749074 - MLT1A1 LTR MaLR -2 363 1 909 266 31 12 chr2 40938780 40938863 -209748991 + MIR SINE MIR 182 262 0 269 271 28 21 chr2 40938934 40939078 -209748776 + GA-rich Low_complexity Low_complexity 3 147 0 5426 125 37 13 chr2 40939397 40940377 -209747477 - L1MA8 LINE L1 -6 6285 5290 28645 118 11 56 chr2 40940390 40946826 -209741028 - L1PA7 LINE L1 -4 6150 13 12854 187 27 15 chr2 40946836 40949843 -209738011 - L1M1 LINE L1 -813 6752 3710 7938 229 34 12 chr2 40949839 40952502 -209735352 - L1 LINE L1 -1779 5069 2347 * 3333 205 78 14 chr2 40952520 40952532 -209735322 - L1PBb LINE L1 -4706 2142 2132 2185 140 0 13 chr2 40952532 40952846 -209735008 - AluSx SINE Alu -2 310 1 3333 205 78 14 chr2 40952846 40953728 -209734126 - L1PBb LINE L1 -4716 2132 1098 492 281 42 35 chr2 40953990 40954250 -209733604 - L1PBb LINE L1 -5792 1057 796 310 342 0 0 chr2 40954255 40954334 -209733520 - L1PBb LINE L1 -6353 496 418 * 417 282 21 70 chr2 40954318 40954460 -209733394 - L1 LINE L1 -6018 831 697 276 30 0 0 chr2 40955175 40955208 -209732646 + (TG)n Simple_repeat Simple_repeat 1 33 0 782 304 18 11 chr2 40955209 40955489 -209732365 - L1PBb LINE L1 -6558 291 10 906 218 75 77 chr2 40955498 40955979 -209731875 - L1M1 LINE L1 -3956 3609 3130 731 298 99 66 chr2 40956121 40956501 -209731353 - L1ME2 LINE L1 -283 5881 5472 2454 62 0 3 chr2 40956501 40956805 -209731049 - AluY SINE Alu -8 303 1 731 298 99 66 chr2 40956805 40957028 -209730826 - L1ME2 LINE L1 -692 5472 5258 385 195 0 35 chr2 40957347 40957460 -209730394 + (TA)n Simple_repeat Simple_repeat 1 109 0 1890 132 33 36 chr2 40957460 40957764 -209730090 - AluJb SINE Alu -8 304 2 198 0 0 0 chr2 40957964 40957986 -209729868 + (GA)n Simple_repeat Simple_repeat 2 23 0 322 225 14 14 chr2 40958998 40959069 -209728785 + L2 LINE L2 3239 3309 -4 297 0 0 0 chr2 40959276 40959309 -209728545 + (TA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr2 40959309 40959330 -209728524 + (T)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr2 40959563 40959600 -209728254 + AT_rich Low_complexity Low_complexity 1 37 0 2070 159 43 66 chr2 40959858 40960375 -209727479 - MLT1D LTR MaLR 0 505 1 2075 118 70 17 chr2 40960439 40960795 -209727059 + THE1C LTR MaLR 1 375 0 303 113 0 0 chr2 40961338 40961391 -209726463 + (TG)n Simple_repeat Simple_repeat 2 54 0 183 156 0 0 chr2 40962211 40962243 -209725611 + T-rich Low_complexity Low_complexity 2 33 0 383 260 169 32 chr2 40963136 40963290 -209724564 - MER5A DNA MER1_type -6 183 9 2419 73 0 3 chr2 40963642 40963967 -209723887 - AluSg SINE Alu 0 334 11 279 232 162 10 chr2 40964563 40964662 -209723192 - L2 LINE L2 -8 3305 3192 202 283 0 0 chr2 40965075 40965128 -209722726 + L2 LINE L2 2313 2365 -949 427 111 0 0 chr2 40965135 40965207 -209722647 - L1MB2 LINE L1 -211 5960 5889 27 49 0 0 chr2 40965254 40965295 -209722559 + AT_rich Low_complexity Low_complexity 1 41 0 1531 189 7 46 chr2 40965329 40965635 -209722219 - AluJb SINE Alu -12 300 7 385 307 146 28 chr2 40965678 40965890 -209721964 - L2 LINE L2 -704 2610 2374 214 171 37 37 chr2 40965934 40966016 -209721838 + (TATAA)n Simple_repeat Simple_repeat 4 85 0 444 294 123 25 chr2 40966021 40966378 -209721476 + L1ME LINE L1 5311 5702 -419 263 330 47 0 chr2 40968301 40968407 -209719447 + MIR3 SINE MIR 70 180 -28 200 159 0 23 chr2 40968658 40968702 -209719152 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 204 40 0 0 chr2 40968702 40968727 -209719127 + (CA)n Simple_repeat Simple_repeat 2 26 0 733 192 0 15 chr2 40968731 40968861 -209718993 - FLAM_A SINE Alu -5 128 1 269 113 72 201 chr2 40969267 40969461 -209718393 - MER53 DNA DNA -20 169 1 232 265 99 37 chr2 40969728 40969890 -209717964 - L1ME LINE L1 -342 5779 5608 186 167 0 0 chr2 40970621 40970657 -209717197 + A-rich Low_complexity Low_complexity 2 37 0 438 179 104 37 chr2 40971086 40971220 -209716634 - MER103 DNA DNA -8 158 16 807 180 160 16 chr2 40972385 40972579 -209715275 - MER58A DNA MER1_type -2 222 1 685 276 38 66 chr2 40972840 40973194 -209714660 + L1MEc LINE L1 1896 2258 -3957 476 75 25 25 chr2 40973194 40973274 -209714580 + MADE1 DNA Mariner 1 80 0 685 276 38 66 chr2 40973274 40973717 -209714137 + L1MEc LINE L1 2258 2644 -3571 346 279 150 13 chr2 40973817 40974108 -209713746 + L3 LINE CR1 436 829 -748 658 212 92 102 chr2 40974163 40974335 -209713519 - L1ME3 LINE L1 -21 6141 5972 3689 191 97 16 chr2 40974335 40975130 -209712724 - MER21B LTR ERV1 0 863 5 658 212 92 102 chr2 40975130 40975240 -209712614 - L1ME3 LINE L1 -190 5972 5862 695 242 213 2 chr2 40975260 40975702 -209712152 - L1ME3 LINE L1 -1538 4608 4074 3258 170 39 8 chr2 40975745 40976332 -209711522 - MER6A DNA MER2_type 0 605 1 504 330 121 59 chr2 40976456 40976639 -209711215 + L3 LINE CR1 1001 1171 -406 1321 151 29 129 chr2 40976639 40977013 -209710841 + THE1C LTR MaLR 1 330 -45 2051 128 14 7 chr2 40977013 40977310 -209710544 - AluSq SINE Alu -14 299 1 1321 151 29 129 chr2 40977310 40977352 -209710502 + THE1C LTR MaLR 330 375 0 504 330 121 59 chr2 40977352 40977707 -209710147 + L3 LINE CR1 1171 1572 -5 661 279 31 22 chr2 40978004 40978230 -209709624 + MIR SINE MIR 6 233 -29 2075 138 42 17 chr2 40978245 40978600 -209709254 + THE1B LTR MaLR 1 364 0 7503 179 84 5 chr2 40978602 40980131 -209707723 + THE1B-int LTR MaLR 3 1651 0 2379 114 31 17 chr2 40980131 40980490 -209707364 + THE1B LTR MaLR 1 364 0 417 86 0 0 chr2 40980945 40981003 -209706851 + (CA)n Simple_repeat Simple_repeat 1 58 0 2600 176 17 0 chr2 40981726 40982186 -209705668 + MER70B LTR ERVL 1 468 -110 25 0 0 0 chr2 40983153 40983178 -209704676 + AT_rich Low_complexity Low_complexity 1 25 0 237 256 0 0 chr2 40983609 40983691 -209704163 + (TA)n Simple_repeat Simple_repeat 1 82 0 323 375 72 16 chr2 40983807 40984058 -209703796 + HAL1b LINE L1 221 485 -863 303 280 83 61 chr2 40984540 40984672 -209703182 + L2 LINE L2 2847 2981 -291 394 262 25 99 chr2 40984679 40984881 -209702973 + L2 LINE L2 3085 3271 -1 375 316 72 34 chr2 40987625 40987744 -209700110 + L1ME4a LINE L1 5635 5748 -373 495 0 0 0 chr2 40987744 40987799 -209700055 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2116 92 14 11 chr2 40987801 40988084 -209699770 - AluSp SINE Alu -29 284 1 375 316 72 34 chr2 40988084 40988224 -209699630 + L1ME4a LINE L1 5748 5907 -214 372 205 17 17 chr2 40988438 40988555 -209699299 + CT-rich Low_complexity Low_complexity 2 118 0 866 206 0 26 chr2 40988700 40988894 -209698960 - MER5A DNA MER1_type 0 189 1 326 319 5 69 chr2 40989686 40989874 -209697980 - MIR SINE MIR -79 183 8 561 68 0 0 chr2 40990027 40990101 -209697753 + (TA)n Simple_repeat Simple_repeat 2 75 0 2230 112 0 0 chr2 40990101 40990397 -209697457 - AluSq SINE Alu -17 296 1 1335 236 47 25 chr2 40991243 40991646 -209696208 - MER92A LTR ERV1 0 412 1 266 253 179 11 chr2 40991723 40991818 -209696036 + MER5A DNA MER1_type 73 183 -6 437 286 75 12 chr2 40991844 40992005 -209695849 + MIR SINE MIR 37 207 -55 2110 130 0 3 chr2 40992123 40992424 -209695430 - AluSx SINE Alu -1 311 12 7192 110 26 3 chr2 40992463 40993600 -209694254 - L1PA8A LINE L1 -1341 4805 3639 6179 79 3 32 chr2 40993600 40994945 -209692909 + L1PA8A LINE L1 4809 6130 -1 7192 110 26 3 chr2 40994945 40994956 -209692898 - L1P LINE L1 -2507 3639 3630 214 250 29 29 chr2 40995658 40995726 -209692128 + CT-rich Low_complexity Low_complexity 2 69 0 1868 201 81 0 chr2 40996155 40996549 -209691305 + L1MB5 LINE L1 5697 6122 -52 1826 154 74 3 chr2 40997072 40997396 -209690458 - MER7A DNA MER2_type 0 346 2 563 307 80 0 chr2 40998558 40998734 -209689120 + MIR SINE MIR 4 193 -69 237 222 48 0 chr2 40999335 40999398 -209688456 - MER45 DNA AcHobo 0 1581 1516 415 311 102 0 chr2 41001252 41001429 -209686425 - MIR SINE MIR -14 248 54 808 307 75 50 chr2 41001563 41002042 -209685812 + MLT1K LTR MaLR 13 503 -85 199 128 51 0 chr2 41002457 41002496 -209685358 - L2 LINE L2 0 3313 3273 222 235 39 0 chr2 41002576 41002627 -209685227 - L2 LINE L2 -325 2988 2936 642 242 0 0 chr2 41003098 41003222 -209684632 - MIR SINE MIR -79 183 60 444 331 45 113 chr2 41003870 41004425 -209683429 - L3 LINE CR1 -11 1566 1050 200 231 0 0 chr2 41004885 41004924 -209682930 + CT-rich Low_complexity Low_complexity 2 40 0 1070 176 4 64 chr2 41007016 41007249 -209680605 - MER20 DNA MER1_type 0 219 1 203 179 161 0 chr2 41007776 41007832 -209680022 - L2 LINE L2 -15 3298 3234 319 312 130 33 chr2 41008653 41008868 -209678986 - MIR SINE MIR -7 255 20 217 363 56 12 chr2 41009136 41009296 -209678558 + MIR SINE MIR 93 259 -3 203 77 0 26 chr2 41010109 41010148 -209677706 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 273 242 316 0 chr2 41010318 41010413 -209677441 + MIR SINE MIR 21 146 -62 284 260 27 0 chr2 41010722 41010795 -209677059 - MIR SINE MIR -27 235 161 710 309 31 0 chr2 41010937 41011128 -209676726 - MIR SINE MIR -21 241 45 204 312 225 0 chr2 41011724 41011862 -209675992 + MIR3 SINE MIR 10 178 -30 21 0 0 0 chr2 41012671 41012692 -209675162 + AT_rich Low_complexity Low_complexity 1 21 0 3671 150 24 43 chr2 41012961 41013702 -209674152 - L1MB2 LINE L1 -1 6170 5444 2753 217 78 24 chr2 41013848 41014593 -209673261 - MER21B LTR ERV1 -60 803 19 261 190 25 149 chr2 41014591 41014712 -209673142 - MER21B LTR ERV1 -757 106 1 * 2268 129 15 0 chr2 41014776 41015108 -209672746 + MER1B DNA MER1_type 1 337 0 203 258 34 34 chr2 41015358 41015447 -209672407 + (GGATG)n Simple_repeat Simple_repeat 1 89 0 1785 146 113 40 chr2 41015659 41016056 -209671798 + MSTA LTR MaLR 3 428 0 793 172 0 0 chr2 41017256 41017384 -209670470 + FLAM_C SINE Alu 5 132 -1 232 333 17 23 chr2 41021789 41021966 -209665888 - HAL1 LINE L1 -838 1669 1494 433 268 96 122 chr2 41022019 41022583 -209665271 - L1MDa LINE L1 -1160 1741 1228 24 53 0 0 chr2 41023564 41023602 -209664252 + AT_rich Low_complexity Low_complexity 1 38 0 282 367 48 20 chr2 41023747 41023894 -209663960 + L2 LINE L2 3122 3272 0 1449 271 89 34 chr2 41024035 41024531 -209663323 - MLT1E LTR MaLR 0 593 61 2003 138 59 8 chr2 41024531 41024887 -209662967 + THE1C LTR MaLR 2 375 0 1449 271 89 34 chr2 41024887 41024952 -209662902 - MLT1E LTR MaLR -532 61 1 402 270 49 54 chr2 41024953 41025138 -209662716 + MIR SINE MIR 78 261 -1 186 254 237 61 chr2 41025452 41025566 -209662288 + MIR3 SINE MIR 50 183 -25 388 335 87 14 chr2 41026121 41026408 -209661446 - MARNA DNA Mariner -133 453 146 394 115 64 0 chr2 41026466 41026544 -209661310 + L1PA13 LINE L1 6081 6163 0 327 250 76 0 chr2 41026605 41026697 -209661157 + MIR SINE MIR 53 151 -111 370 312 55 60 chr2 41026934 41027152 -209660702 - MIR SINE MIR -44 218 2 441 264 51 90 chr2 41027214 41027392 -209660462 + MER5B DNA MER1_type 1 171 -7 232 364 68 0 chr2 41027449 41027537 -209660317 + MIR SINE MIR 30 123 -85 182 250 120 65 chr2 41028589 41028697 -209659157 - MIR SINE MIR -132 130 17 5487 109 42 22 chr2 41030134 41031244 -209656610 - L1MA4A LINE L1 -7 6998 5861 735 183 15 0 chr2 41031248 41031379 -209656475 - FRAM SINE Alu -15 161 29 10609 169 43 28 chr2 41031381 41031531 -209656323 - L1MA4A LINE L1 -983 5865 5719 2017 138 6 13 chr2 41031531 41031843 -209656011 - AluSx SINE Alu -2 310 1 10609 169 43 28 chr2 41031843 41032766 -209655088 - L1MA4A LINE L1 -1129 5719 4811 1812 123 54 48 chr2 41032766 41033139 -209654715 + THE1C LTR MaLR 1 375 0 10609 169 43 28 chr2 41033139 41034556 -209653298 - L1MA4A LINE L1 -2037 4811 3337 8291 173 47 72 chr2 41034554 41036541 -209651313 - L1MA4A LINE L1 -4911 1938 2 * 1315 205 105 26 chr2 41036577 41036997 -209650857 - L1MDa LINE L1 -4516 2024 1572 272 296 96 30 chr2 41037136 41037271 -209650583 + MIR3 SINE MIR 21 164 -44 733 274 102 52 chr2 41039133 41039709 -209648145 - HAL1 LINE L1 -1367 1140 536 305 245 53 0 chr2 41039779 41039873 -209647981 - HAL1 LINE L1 -2408 99 1 367 260 0 60 chr2 41042362 41042462 -209645392 + L2 LINE L2 3220 3313 0 324 326 96 16 chr2 41042687 41042874 -209644980 - MIR SINE MIR -27 235 34 260 292 11 56 chr2 41043254 41043343 -209644511 - L2 LINE L2 -18 3254 3170 285 301 97 80 chr2 41043442 41043731 -209644123 + L2 LINE L2 2812 3105 -167 500 271 77 50 chr2 41046551 41046691 -209641163 - MLT1K LTR MaLR -252 336 186 1359 180 65 45 chr2 41046691 41047047 -209640807 - MLT1A1 LTR MaLR -2 363 1 500 271 77 50 chr2 41047047 41047127 -209640727 - MLT1K LTR MaLR -402 186 110 197 349 35 12 chr2 41047602 41047688 -209640166 - MIR SINE MIR -114 148 61 321 227 109 11 chr2 41048042 41048219 -209639635 - L1ME4a LINE L1 -236 5885 5691 866 294 99 51 chr2 41048499 41048992 -209638862 + MLT1H LTR MaLR 18 534 -15 264 399 6 39 chr2 41049219 41049397 -209638457 + MIR3 SINE MIR 1 172 -36 * 302 243 0 14 chr2 41049382 41049456 -209638398 - MIR SINE MIR 0 262 190 1750 254 91 22 chr2 41050005 41050835 -209637019 + L1ME3A LINE L1 5122 6011 -159 4270 206 28 13 chr2 41051015 41052108 -209635746 + L1P LINE L1 4254 5363 -783 391 273 22 14 chr2 41052122 41052261 -209635593 - L1ME3A LINE L1 -159 6011 5872 3799 112 105 7 chr2 41052261 41052975 -209634879 + L1PA16 LINE L1 5381 6164 -2 206 309 203 16 chr2 41054047 41054170 -209633684 - MIR3 SINE MIR -49 159 14 422 283 164 31 chr2 41054422 41054581 -209633273 - MER5A DNA MER1_type -1 188 9 538 248 32 11 chr2 41054586 41054747 -209633107 - MLT1A1 LTR MaLR -2 426 221 390 214 0 94 chr2 41054889 41055006 -209632848 - MLT1A1 LTR MaLR -259 106 1 7877 191 69 17 chr2 41055007 41056655 -209631199 - MLT1A1-int LTR MaLR -1 1734 1 1691 207 8 32 chr2 41056655 41057025 -209630829 - MLT1A1 LTR MaLR -2 363 1 1147 315 50 23 chr2 41057277 41057997 -209629857 - L2 LINE L2 -1 3312 2574 506 264 112 6 chr2 41058426 41058604 -209629250 - MER117 DNA MER1_type 0 197 1 645 267 81 38 chr2 41058652 41058888 -209628966 + MIR SINE MIR 5 250 -12 270 0 0 0 chr2 41058994 41059024 -209628830 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2066 122 0 0 chr2 41059411 41059697 -209628157 - AluSx SINE Alu 0 312 27 254 73 24 0 chr2 41060243 41060284 -209627570 + (CA)n Simple_repeat Simple_repeat 2 43 0 339 292 49 14 chr2 41060504 41060648 -209627206 - L1MEc LINE L1 -4850 1460 1312 1056 258 87 95 chr2 41060662 41061908 -209625946 - L1MEc LINE L1 -4862 1257 22 355 367 33 70 chr2 41061940 41062240 -209625614 - L2 LINE L2 -18 3254 2966 996 306 21 24 chr2 41062420 41062796 -209625058 - LTR16B LTR ERVL -13 451 77 186 65 97 0 chr2 41065030 41065092 -209622762 + (TA)n Simple_repeat Simple_repeat 1 68 0 195 184 0 0 chr2 41065718 41065756 -209622098 + (TA)n Simple_repeat Simple_repeat 1 38 0 226 208 17 110 chr2 41065793 41065966 -209621888 + L1 LINE L1 2242 2398 -3748 2038 129 0 0 chr2 41066097 41066377 -209621477 + AluSg SINE Alu 1 280 -30 334 289 69 37 chr2 41066384 41066602 -209621252 + L1MC4a LINE L1 2505 2729 -3417 297 0 0 0 chr2 41066608 41066641 -209621213 + (CA)n Simple_repeat Simple_repeat 2 34 0 294 284 121 26 chr2 41066838 41067302 -209620552 + L1MC4a LINE L1 4890 5397 -749 2374 83 0 16 chr2 41067325 41067639 -209620215 - AluY SINE Alu -2 309 1 939 226 21 24 chr2 41067659 41067701 -209620153 + L1MC4a LINE L1 5722 5763 -2045 920 216 98 77 chr2 41067701 41068089 -209619765 + MSTD LTR MaLR 1 396 0 939 226 21 24 chr2 41068089 41068333 -209619521 + L1MC4a LINE L1 5763 6007 -1801 325 358 66 0 chr2 41069018 41069155 -209618699 + MIR SINE MIR 47 192 -70 215 278 87 48 chr2 41070371 41070497 -209617357 + MIR SINE MIR 99 229 -33 444 273 16 76 chr2 41070688 41070937 -209616917 - MER112 DNA MER1_type -6 254 21 221 328 38 23 chr2 41070983 41071114 -209616740 + L2 LINE L2 2230 2362 -952 22 35 0 0 chr2 41071139 41071168 -209616686 + AT_rich Low_complexity Low_complexity 1 29 0 399 323 75 1 chr2 41071592 41071732 -209616122 - MIR3 SINE MIR -26 182 30 1053 124 0 0 chr2 41072461 41072606 -209615248 - AluSg/x SINE Alu -4 308 164 224 213 66 49 chr2 41073446 41073507 -209614347 - L2 LINE L2 -7 3265 3204 262 254 0 0 chr2 41073554 41073609 -209614245 - L2 LINE L2 -3 3269 3215 1789 107 8 0 chr2 41073632 41073876 -209613978 - MLT2A2 LTR ERVL -207 246 1 41185 92 15 3 chr2 41073876 41079339 -209608515 - HERVL-A2-A2 LTR ERVL 0 5654 124 2053 104 0 17 chr2 41079337 41079624 -209608230 + HERVL LTR ERVL 779 1060 -4594 * 938 92 0 0 chr2 41079621 41079752 -209608102 - HERVL-A2-A2 LTR ERVL -5523 131 1 * 2318 141 62 33 chr2 41079752 41079773 -209608081 - MLT2A2 LTR ERVL 0 554 535 3119 174 20 63 chr2 41079773 41080412 -209607442 - LTR9 LTR ERV1 0 612 1 2318 141 62 33 chr2 41080412 41080901 -209606953 - MLT2A2 LTR ERVL -19 535 3 1009 197 67 0 chr2 41080986 41081179 -209606675 - MER58A DNA MER1_type -9 215 10 225 163 93 0 chr2 41081401 41081444 -209606410 - MLT1L LTR MaLR -354 261 215 210 383 17 0 chr2 41081574 41081634 -209606220 - L2 LINE L2 -90 3182 3122 2049 128 7 7 chr2 41082025 41082323 -209605531 + AluSx SINE Alu 1 298 -14 323 287 54 24 chr2 41083049 41083216 -209604638 - L1ME4a LINE L1 -258 5863 5692 1149 260 29 55 chr2 41083237 41083750 -209604104 + MLT1G1 LTR MaLR 1 595 0 531 276 72 17 chr2 41083750 41083931 -209603923 - L1ME4a LINE L1 -451 5670 5480 275 261 92 17 chr2 41084674 41084793 -209603061 - L1ME4a LINE L1 -72 6049 5922 331 282 80 12 chr2 41084913 41085076 -209602778 - L1ME4a LINE L1 -373 5748 5575 525 232 74 20 chr2 41085723 41085874 -209601980 - MER5A DNA MER1_type -11 167 20 668 265 172 51 chr2 41085889 41086280 -209601574 + LTR16A LTR ERVL 17 448 -2 366 357 57 6 chr2 41086790 41086947 -209600907 + MIR SINE MIR 2 166 -96 731 193 114 50 chr2 41087013 41087215 -209600639 - MIR SINE MIR 0 262 48 965 142 60 16 chr2 41087386 41087569 -209600285 + L1MA8 LINE L1 5949 6139 -152 10823 45 3 0 chr2 41087577 41089597 -209598257 - L1PA4 LINE L1 -3 6152 4128 7573 33 3 0 chr2 41089597 41090496 -209597358 + L1PA4 LINE L1 3229 4130 -2016 887 131 46 7 chr2 41090496 41090643 -209597211 + L1MA8 LINE L1 6127 6285 -6 183 167 0 0 chr2 41091678 41091720 -209596134 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 400 308 95 6 chr2 41092506 41092675 -209595179 - L2 LINE L2 -426 2888 2705 403 275 142 69 chr2 41092879 41093112 -209594742 - MIR SINE MIR -11 251 2 190 195 65 65 chr2 41093167 41093244 -209594610 - MIR SINE MIR -63 145 69 984 159 7 4 chr2 41093957 41094235 -209593619 + (TA)n Simple_repeat Simple_repeat 1 279 0 301 171 32 8 chr2 41094296 41094419 -209593435 + (TA)n Simple_repeat Simple_repeat 1 126 0 325 234 96 0 chr2 41094421 41094515 -209593339 + MER103 DNA DNA 62 164 -2 3093 92 11 58 chr2 41095617 41096083 -209591771 - MLT2A1 LTR ERVL 0 444 1 281 297 51 25 chr2 41098350 41098468 -209589386 + MIR3 SINE MIR 83 203 -5 11177 37 2 0 chr2 41098500 41100542 -209587312 - L1PA3 LINE L1 0 6155 4112 3856 46 0 36 chr2 41100542 41101046 -209586808 + L1P LINE L1 622 1107 -5039 762 85 0 0 chr2 41101046 41101140 -209586714 - AluS SINE Alu -214 98 5 1251 168 80 9 chr2 41101149 41101375 -209586479 - MER21B LTR ERV1 -227 636 395 686 302 15 0 chr2 41101644 41101849 -209586005 - MIR SINE MIR -10 252 45 1294 145 36 0 chr2 41102182 41102403 -209585451 - L1MD3 LINE L1 0 7995 7767 1156 172 57 55 chr2 41102416 41102816 -209585038 - MLT1A1 LTR MaLR 0 365 9 3476 204 44 10 chr2 41102827 41103593 -209584261 - L1MC4a LINE L1 -227 7581 6790 5135 145 33 29 chr2 41103618 41104508 -209583346 - L1MC2 LINE L1 -8 6336 5444 230 342 0 33 chr2 41104731 41104883 -209582971 - HAL1b LINE L1 -653 695 549 317 129 0 16 chr2 41105293 41105355 -209582499 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 370 308 58 17 chr2 41105356 41105528 -209582326 + MLT1K LTR MaLR 396 574 -14 661 79 10 40 chr2 41107300 41107401 -209580453 - Tigger5 DNA MER2_type -91 2232 2135 2476 147 65 31 chr2 41107403 41107818 -209580036 + Tigger2a DNA MER2_type 3 431 -3 474 225 57 105 chr2 41107834 41108043 -209579811 + MLT1K LTR MaLR 378 576 -12 419 323 12 12 chr2 41108049 41108216 -209579638 - HAL1b LINE L1 -833 515 349 327 332 164 48 chr2 41108882 41109132 -209578722 - L2 LINE L2 -21 3251 2973 2369 82 3 13 chr2 41109387 41109691 -209578163 - AluSg SINE Alu -9 301 1 220 392 0 0 chr2 41109938 41110040 -209577814 - MIR SINE MIR -72 190 89 458 289 119 34 chr2 41110744 41110979 -209576875 + MIR SINE MIR 2 256 -6 23 33 0 0 chr2 41111473 41111503 -209576351 + AT_rich Low_complexity Low_complexity 1 30 0 198 242 21 116 chr2 41112313 41112408 -209575446 - L3 LINE CR1 -5 1572 1487 234 330 44 0 chr2 41112666 41112757 -209575097 - MIR3 SINE MIR -48 160 66 411 56 0 0 chr2 41113108 41113162 -209574692 + (CA)n Simple_repeat Simple_repeat 2 55 0 1055 130 43 133 chr2 41114835 41115100 -209572754 + MER33 DNA MER1_type 26 258 -2327 2011 159 3 0 chr2 41115100 41115409 -209572445 + AluJb SINE Alu 1 310 -2 1055 130 43 133 chr2 41115409 41115466 -209572388 + MER33 DNA MER1_type 258 319 -5 262 224 0 35 chr2 41115896 41115954 -209571900 + G-rich Low_complexity Low_complexity 2 57 0 1621 148 35 12 chr2 41116784 41117116 -209570738 - MER61C LTR ERV1 0 434 3 436 267 113 13 chr2 41117204 41117354 -209570500 + MER5A DNA MER1_type 25 189 0 679 288 20 14 chr2 41117435 41117651 -209570203 - MIR SINE MIR -14 248 26 10137 27 0 196 chr2 41117693 41119417 -209568437 - SVA Other Other 0 1386 1 256 269 75 0 chr2 41119558 41119625 -209568229 - MIR SINE MIR -98 110 39 1746 107 7 22 chr2 41119738 41120008 -209567846 - L1MA9 LINE L1 0 6312 6047 383 291 69 11 chr2 41120571 41120746 -209567108 - L1MC/D LINE L1 -1984 5824 5640 1688 107 25 0 chr2 41120750 41120992 -209566862 - L1PA14 LINE L1 -2 6159 5912 788 142 17 0 chr2 41120993 41121113 -209566741 + L1PA14 LINE L1 5826 5947 -214 * 991 267 43 8 chr2 41121095 41121398 -209566456 - L1MC/D LINE L1 -468 5653 5338 242 254 0 0 chr2 41122140 41122195 -209565659 + MER5A DNA MER1_type 60 114 -75 279 321 74 6 chr2 41124240 41124399 -209563455 - MIR3 SINE MIR -68 140 4 2374 77 44 0 chr2 41124931 41125229 -209562625 + AluY SINE Alu 1 311 0 262 215 92 15 chr2 41125236 41125301 -209562553 + MIR SINE MIR 20 89 -173 195 129 0 0 chr2 41125359 41125390 -209562464 + (TAA)n Simple_repeat Simple_repeat 1 31 0 243 262 78 39 chr2 41125399 41125502 -209562352 - MIR SINE MIR -6 256 150 305 369 37 33 chr2 41125535 41125779 -209562075 - L2 LINE L2 0 3272 3028 284 170 0 0 chr2 41126874 41126921 -209560933 + MIR SINE MIR 92 138 -70 1797 162 26 20 chr2 41126951 41127122 -209560732 - AluJb SINE Alu -7 305 130 2370 85 0 0 chr2 41127122 41127416 -209560438 - AluSc SINE Alu -11 298 5 1797 162 26 20 chr2 41127416 41127547 -209560307 - AluJb SINE Alu -182 130 1 494 297 62 34 chr2 41127631 41127840 -209560014 + MIR SINE MIR 48 262 0 183 366 35 63 chr2 41128055 41128197 -209559657 - L2 LINE L2 -1 3271 3134 781 288 60 0 chr2 41128556 41128789 -209559065 - MIR SINE MIR -4 258 12 2394 98 0 0 chr2 41129784 41130090 -209557764 + AluSx SINE Alu 1 306 -6 3001 145 30 35 chr2 41131014 41131553 -209556301 - L1MA9 LINE L1 0 6312 5777 198 191 0 0 chr2 41131560 41131602 -209556252 + (TA)n Simple_repeat Simple_repeat 2 43 0 306 50 0 0 chr2 41131673 41131713 -209556141 + (CA)n Simple_repeat Simple_repeat 1 40 0 1914 140 11 0 chr2 41133043 41133349 -209554505 + AluJb SINE Alu 1 309 0 2389 83 114 15 chr2 41133394 41133835 -209554019 + MER1A DNA MER1_type 1 523 -6 297 313 70 0 chr2 41133838 41133966 -209553888 + L1MC4a LINE L1 5769 5905 -1903 2205 85 7 0 chr2 41134089 41134400 -209553454 - AluSq SINE Alu 0 313 1 7404 110 58 31 chr2 41134644 41135842 -209552012 - Tigger3b DNA MER2_type -1 1230 1 269 303 136 8 chr2 41135985 41136117 -209551737 - MIR SINE MIR -50 212 64 230 317 50 0 chr2 41136160 41136220 -209551634 + MIR SINE MIR 87 149 -59 2306 86 7 3 chr2 41136818 41137119 -209550735 - AluSx SINE Alu -10 302 1 2353 148 101 13 chr2 41137154 41137620 -209550234 - MER74A LTR ERVL -51 507 1 22 0 0 0 chr2 41138055 41138077 -209549777 + AT_rich Low_complexity Low_complexity 1 22 0 2148 139 0 0 chr2 41138213 41138516 -209549338 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 41138831 41138852 -209549002 + AT_rich Low_complexity Low_complexity 1 21 0 237 178 0 0 chr2 41139258 41139303 -209548551 + T-rich Low_complexity Low_complexity 1 45 0 1838 203 68 62 chr2 41140035 41140537 -209547317 - MLT1D LTR MaLR 0 505 1 279 192 41 0 chr2 41140807 41140880 -209546974 + A-rich Low_complexity Low_complexity 4 79 0 1910 96 3 21 chr2 41140974 41141256 -209546598 - L1PA8 LINE L1 -2 6170 5894 8035 25 0 2 chr2 41141858 41143195 -209544659 - L1PA4 LINE L1 -5 6150 4814 3729 235 85 21 chr2 41143227 41144340 -209543514 + L2 LINE L2 1420 2604 -710 897 238 11 75 chr2 41144354 41144619 -209543235 + MIR SINE MIR 11 258 -4 6741 100 14 0 chr2 41145088 41145796 -209542058 + L1PA8 LINE L1 4457 5153 -1019 2118 133 7 0 chr2 41145796 41146104 -209541750 + AluSg SINE Alu 1 310 0 6741 100 14 0 chr2 41146104 41147120 -209540734 + L1PA8 LINE L1 5153 6164 -8 22 0 0 0 chr2 41147120 41147142 -209540712 + AT_rich Low_complexity Low_complexity 1 22 0 444 286 101 50 chr2 41148954 41149192 -209538662 - MIR SINE MIR -12 250 1 1379 283 216 26 chr2 41149226 41149611 -209538243 + L2 LINE L2 2013 2324 -990 2341 108 3 0 chr2 41149611 41149927 -209537927 - L1PA14 LINE L1 0 6161 5845 1379 283 216 26 chr2 41149927 41150351 -209537503 + L2 LINE L2 2324 2976 -338 262 301 52 52 chr2 41151551 41151687 -209536167 + L2 LINE L2 3132 3267 -5 210 329 32 111 chr2 41153172 41153388 -209534466 + L2 LINE L2 2981 3179 -93 319 278 8 52 chr2 41155703 41155986 -209531868 + G-rich Low_complexity Low_complexity 1 270 0 205 264 42 30 chr2 41155904 41156071 -209531783 + (CGGG)n Simple_repeat Simple_repeat 3 171 0 * 21 71 0 0 chr2 41156098 41156140 -209531714 + GC_rich Low_complexity Low_complexity 1 42 0 318 305 125 62 chr2 41156143 41156582 -209531272 + L1M2 LINE L1 941 1407 -5442 255 313 0 57 chr2 41156696 41156872 -209530982 + CT-rich Low_complexity Low_complexity 4 169 0 358 311 91 8 chr2 41158339 41158471 -209529383 - L3 LINE CR1 -3 1574 1432 248 331 55 31 chr2 41158604 41158767 -209529087 + MIR3 SINE MIR 41 207 -1 331 281 104 0 chr2 41158911 41159007 -209528847 + MIR3 SINE MIR 69 174 -34 327 343 90 45 chr2 41159824 41160069 -209527785 - L3 LINE CR1 -945 632 377 189 107 0 0 chr2 41160464 41160492 -209527362 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 379 286 10 10 chr2 41160508 41160606 -209527248 - L2 LINE L2 -39 3274 3177 273 216 91 11 chr2 41161768 41161856 -209525998 - Charlie7 DNA MER1_type -48 2564 2470 232 316 21 0 chr2 41161883 41161978 -209525876 - Charlie7 DNA MER1_type -2514 98 2 1545 169 10 59 chr2 41162691 41162998 -209524856 - AluJo SINE Alu -11 301 10 3103 133 17 0 chr2 41164377 41164842 -209523012 + L1PB1 LINE L1 5678 6150 -1 21 0 0 0 chr2 41164842 41164863 -209522991 + AT_rich Low_complexity Low_complexity 1 21 0 1467 188 7 22 chr2 41165956 41166232 -209521622 - AluJo SINE Alu -18 294 23 358 267 0 11 chr2 41166366 41166456 -209521398 - MLT1L LTR MaLR -15 600 512 1088 157 31 14 chr2 41166659 41166882 -209520972 - MLT1L LTR MaLR -348 267 41 263 279 0 13 chr2 41168130 41168209 -209519645 + GA-rich Low_complexity Low_complexity 3 80 0 2929 155 71 2 chr2 41168341 41168850 -209519004 + L1MB5 LINE L1 5585 6128 -46 338 376 43 8 chr2 41168949 41169183 -209518671 + L2 LINE L2 2814 3055 -217 512 329 12 6 chr2 41170245 41170415 -209517439 + MIR3 SINE MIR 36 206 -2 446 260 62 45 chr2 41172100 41172277 -209515577 + MIR3 SINE MIR 20 199 -9 301 213 293 48 chr2 41174451 41174724 -209513130 - L1ME4a LINE L1 0 6121 5782 324 284 95 52 chr2 41174757 41175084 -209512770 + L2 LINE L2 2671 3020 -252 215 329 65 75 chr2 41175163 41175485 -209512369 + L2 LINE L2 2642 2960 -354 246 211 0 18 chr2 41175640 41175697 -209512157 + L2 LINE L2 3184 3239 -74 477 0 0 0 chr2 41177134 41177187 -209510667 + (TG)n Simple_repeat Simple_repeat 2 54 0 730 235 146 3 chr2 41178027 41178260 -209509594 + MIR SINE MIR 1 261 -1 301 311 140 12 chr2 41178270 41178434 -209509420 + MIR SINE MIR 78 262 0 197 143 0 0 chr2 41179615 41179650 -209508204 + L2 LINE L2 3238 3272 0 1007 142 22 11 chr2 41179701 41179884 -209507970 + L1MB3 LINE L1 5956 6140 -43 4891 247 90 18 chr2 41179887 41181612 -209506242 + L1M3c LINE L1 2 1850 -4361 1898 158 3 46 chr2 41181613 41181979 -209505875 + L1MA9 LINE L1 5454 5803 -509 344 125 0 0 chr2 41181986 41182042 -209505812 - L1M1 LINE L1 -517 5788 5733 186 103 0 0 chr2 41182103 41182132 -209505722 + (TA)n Simple_repeat Simple_repeat 2 30 0 2761 127 26 45 chr2 41182132 41182622 -209505232 + L1MA9 LINE L1 5794 6274 -38 386 103 0 0 chr2 41182622 41182679 -209505175 + L1MB2 LINE L1 6114 6171 0 600 275 41 12 chr2 41182829 41183000 -209504854 - MIR SINE MIR -7 255 80 933 122 0 0 chr2 41183175 41183314 -209504540 + AluY SINE Alu 173 311 0 267 103 0 0 chr2 41184318 41184357 -209503497 + (TAA)n Simple_repeat Simple_repeat 2 40 0 501 225 172 13 chr2 41184377 41184528 -209503326 - MIR SINE MIR -57 205 31 710 173 6 32 chr2 41184767 41184923 -209502931 + MER33 DNA MER1_type 27 178 -146 306 214 43 0 chr2 41184952 41185022 -209502832 + MER33 DNA MER1_type 252 324 0 29 60 0 0 chr2 41186077 41186127 -209501727 + AT_rich Low_complexity Low_complexity 1 50 0 248 288 0 0 chr2 41186159 41186232 -209501622 - MER113 DNA MER1_type? -415 106 34 710 243 133 13 chr2 41186589 41186815 -209501039 - MIR SINE MIR -8 254 2 292 172 50 111 chr2 41188440 41188539 -209499315 + MIR SINE MIR 89 181 -81 4732 224 95 30 chr2 41188546 41189197 -209498657 - L1 LINE L1 -2211 4433 3825 1821 166 0 3 chr2 41189197 41189481 -209498373 - AluSx SINE Alu -13 299 17 4732 224 95 30 chr2 41189481 41189630 -209498224 - L1 LINE L1 -2819 3825 3687 1916 149 7 3 chr2 41189630 41189925 -209497929 - AluJo SINE Alu -15 297 2 4732 224 95 30 chr2 41189925 41192631 -209495223 - L1 LINE L1 -2957 3687 684 24 0 0 0 chr2 41192893 41192917 -209494937 + AT_rich Low_complexity Low_complexity 1 24 0 645 273 17 11 chr2 41192950 41193126 -209494728 + MER5A DNA MER1_type 7 183 -6 274 0 26 0 chr2 41196814 41196852 -209491002 - L1PB2 LINE L1 -7 6144 6106 2284 98 20 0 chr2 41197635 41197932 -209489922 - AluSx SINE Alu -5 307 5 500 249 333 4 chr2 41198116 41198580 -209489274 - L2 LINE L2 0 3313 2717 2769 16 3 0 chr2 41198580 41198887 -209488967 - AluY SINE Alu -3 308 1 257 279 15 0 chr2 41200622 41200690 -209487164 + GA-rich Low_complexity Low_complexity 5 73 0 182 247 65 86 chr2 41200966 41201059 -209486795 + L2 LINE L2 1130 1220 -2094 23 68 0 0 chr2 41201455 41201499 -209486355 + AT_rich Low_complexity Low_complexity 1 44 0 1254 228 39 22 chr2 41201896 41202208 -209485646 - MER46C DNA MER2_type 0 338 22 333 0 0 0 chr2 41202212 41202249 -209485605 + (TG)n Simple_repeat Simple_repeat 2 38 0 198 0 0 0 chr2 41202833 41202855 -209484999 + (TC)n Simple_repeat Simple_repeat 2 23 0 209 354 0 15 chr2 41203380 41203445 -209484409 + L2 LINE L2 3244 3307 -6 2236 136 71 8 chr2 41203554 41203921 -209483933 + MLT1B LTR MaLR 1 390 0 449 317 56 22 chr2 41205113 41205293 -209482561 - MIR3 SINE MIR 0 208 23 308 282 35 0 chr2 41206951 41207036 -209480818 + L2 LINE L2 3185 3272 0 250 236 0 18 chr2 41208359 41208414 -209479440 + CT-rich Low_complexity Low_complexity 1 54 0 653 223 51 40 chr2 41208491 41208666 -209479188 + MER5B DNA MER1_type 1 177 -1 385 231 149 0 chr2 41208716 41208837 -209479017 - MIR SINE MIR -12 250 112 475 209 45 18 chr2 41210072 41210182 -209477672 - L2 LINE L2 -10 3303 3191 235 325 179 13 chr2 41210591 41210893 -209476961 + L2 LINE L2 2921 3272 0 536 313 101 58 chr2 41211694 41211882 -209475972 - L2 LINE L2 -417 2897 2719 1593 155 59 33 chr2 41211882 41212186 -209475668 + AluJo SINE Alu 1 312 0 536 313 101 58 chr2 41212186 41212432 -209475422 - L2 LINE L2 -595 2719 2444 204 97 0 0 chr2 41213581 41213612 -209474242 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 261 275 29 14 chr2 41213849 41213918 -209473936 - MIR SINE MIR -105 157 88 526 257 117 127 chr2 41216116 41216741 -209471113 - L2 LINE L2 -1 3312 2708 192 179 0 0 chr2 41217475 41217514 -209470340 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 6269 54 11 0 chr2 41217737 41218477 -209469377 - L1PA6 LINE L1 0 6154 5407 941 293 123 23 chr2 41219199 41219629 -209468225 - LTR67 LTR ERVL -9 548 76 350 335 50 20 chr2 41219936 41220136 -209467718 + LTR16C LTR ERVL 193 398 -93 440 309 24 18 chr2 41220226 41220391 -209467463 - ERVL LTR ERVL -696 5068 4903 1076 299 107 36 chr2 41220898 41221429 -209466425 - ERVL LTR ERVL -780 4874 4306 1517 191 85 59 chr2 41221447 41221871 -209465983 - MSTB2 LTR MaLR 0 457 23 1924 280 116 36 chr2 41221880 41223001 -209464853 - ERVL LTR ERVL -1383 4271 3061 512 294 94 21 chr2 41223067 41223302 -209464552 - ERVL LTR ERVL -3381 2383 2132 490 216 0 20 chr2 41223303 41223405 -209464449 + L2 LINE L2 1399 1498 -1816 3807 247 61 78 chr2 41223996 41225395 -209462459 + L2 LINE L2 1485 2859 -455 553 195 8 42 chr2 41225399 41225517 -209462337 - MER20 DNA MER1_type -105 114 1 595 315 14 18 chr2 41225812 41226034 -209461820 - LTR67 LTR ERVL -8 549 329 415 236 22 0 chr2 41226075 41226164 -209461690 - LTR67 LTR ERVL -434 123 33 493 302 159 3 chr2 41228077 41228448 -209459406 - L2 LINE L2 -922 2392 1964 1827 154 7 7 chr2 41228452 41228744 -209459110 + AluJb SINE Alu 1 292 -20 475 137 40 0 chr2 41228759 41228883 -209458971 + (TA)n Simple_repeat Simple_repeat 2 130 0 640 295 180 20 chr2 41229223 41229819 -209458035 + L2 LINE L2 2596 3285 -28 467 165 34 37 chr2 41230028 41230149 -209457705 + L1M2 LINE L1 5548 5670 -461 420 281 43 7 chr2 41230183 41230322 -209457532 - MIR SINE MIR -4 258 115 278 254 107 46 chr2 41230363 41230560 -209457294 + L1ME4a LINE L1 5686 5894 -227 235 286 88 22 chr2 41230682 41230773 -209457081 - HAL1b LINE L1 -61 1287 1191 204 97 0 0 chr2 41230776 41230807 -209457047 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 1481 204 41 20 chr2 41230886 41231180 -209456674 - AluJo SINE Alu -10 302 3 490 291 209 0 chr2 41232128 41232334 -209455520 - MIR SINE MIR -10 252 4 557 293 0 46 chr2 41232862 41233036 -209454818 + MER5B DNA MER1_type 3 168 -10 2737 125 19 21 chr2 41233617 41234050 -209453804 + MSTB1 LTR MaLR 1 432 0 289 262 71 0 chr2 41234106 41234190 -209453664 + MIR SINE MIR 56 145 -117 814 229 157 0 chr2 41236065 41236275 -209451579 + MIR SINE MIR 14 256 -6 400 125 0 0 chr2 41236472 41236528 -209451326 + MER5A DNA MER1_type 1 56 -133 277 241 51 13 chr2 41236530 41236609 -209451245 - MER5A DNA MER1_type -12 177 96 754 283 108 6 chr2 41237029 41237361 -209450493 - HAL1b LINE L1 -521 827 462 242 242 106 0 chr2 41237638 41237704 -209450150 + MER94 DNA DNA 3 75 -59 1354 196 176 10 chr2 41237835 41238351 -209449503 + MER114 LTR ERV 47 648 0 2224 81 46 0 chr2 41238591 41238874 -209448980 + AluSc SINE Alu 1 296 -13 1483 163 57 50 chr2 41238876 41239177 -209448677 + AluJo SINE Alu 1 303 -9 5686 119 28 0 chr2 41239769 41240632 -209447222 - L1PA11 LINE L1 0 6174 5285 1823 134 8 0 chr2 41240632 41240894 -209446960 + AluSx SINE Alu 38 301 -11 1892 134 23 33 chr2 41241852 41242158 -209445696 - AluSx SINE Alu -9 303 1 515 275 101 50 chr2 41242358 41242576 -209445278 - MIR SINE MIR -27 235 7 21 36 0 0 chr2 41242968 41242996 -209444858 + AT_rich Low_complexity Low_complexity 1 28 0 1967 247 226 37 chr2 41243087 41244088 -209443766 + L2 LINE L2 1522 2711 -603 363 155 17 0 chr2 41244941 41244999 -209442855 - MER81 DNA DNA -1 113 55 889 266 200 0 chr2 41246239 41246544 -209441310 - L2 LINE L2 -1563 1751 1386 884 56 0 0 chr2 41246551 41246659 -209441195 + AluY SINE Alu 190 297 -14 490 226 133 15 chr2 41246661 41246856 -209440998 - L2 LINE L2 -2257 1057 840 270 0 0 0 chr2 41247080 41247110 -209440744 + (TAA)n Simple_repeat Simple_repeat 1 30 0 823 233 287 15 chr2 41247133 41247537 -209440317 - L2 LINE L2 -2461 853 340 24 0 0 0 chr2 41248344 41248368 -209439486 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 41249154 41249178 -209438676 + AT_rich Low_complexity Low_complexity 1 24 0 247 333 14 0 chr2 41249204 41249351 -209438503 + HAL1 LINE L1 1112 1260 -1247 36 40 0 0 chr2 41249428 41249478 -209438376 + AT_rich Low_complexity Low_complexity 1 50 0 619 302 56 14 chr2 41249526 41249741 -209438113 - MIR SINE MIR 0 262 39 485 323 14 23 chr2 41249743 41250040 -209437814 + HAL1b LINE L1 307 583 -765 255 170 0 0 chr2 41300861 41300908 -209386946 + (CA)n Simple_repeat Simple_repeat 1 47 0 374 284 37 30 chr2 41301192 41301326 -209386528 - MER5B DNA MER1_type -13 165 31 326 297 144 48 chr2 41303262 41303491 -209384363 + L1MB8 LINE L1 5587 5837 -1971 183 80 0 0 chr2 41304402 41304427 -209383427 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 270 343 28 9 chr2 41305488 41305596 -209382258 + L2 LINE L2 3162 3271 -1 823 232 20 16 chr2 41307571 41307821 -209380033 + L1MB8 LINE L1 5926 6176 -2 1900 149 3 17 chr2 41307889 41308190 -209379664 - AluJo SINE Alu -15 297 1 570 270 83 61 chr2 41309696 41309926 -209377928 - MIR SINE MIR -8 254 20 234 0 0 0 chr2 41310513 41310539 -209377315 + (T)n Simple_repeat Simple_repeat 1 26 0 268 304 59 52 chr2 41310876 41311011 -209376843 + MIR SINE MIR 13 148 -114 283 304 170 18 chr2 41311051 41311163 -209376691 + MER91C DNA MER1_type 1 129 -11 2378 92 0 0 chr2 41312730 41313046 -209374808 - AluSx SINE Alu 0 316 1 1089 328 155 32 chr2 41313507 41314080 -209373774 - L2 LINE L2 -126 3187 2686 2027 130 0 37 chr2 41314080 41314402 -209373452 + AluSx SINE Alu 1 310 -2 1089 328 155 32 chr2 41314402 41314795 -209373059 - L2 LINE L2 -627 2686 2100 559 270 31 25 chr2 41316690 41316853 -209371001 - MIR SINE MIR -14 248 85 429 272 123 25 chr2 41317217 41317379 -209370475 - MER5A DNA MER1_type -11 178 1 324 349 124 48 chr2 41318923 41319129 -209368725 + L2 LINE L2 2891 3080 -192 591 217 133 0 chr2 41319129 41319295 -209368559 + MER5A DNA MER1_type 1 188 -1 324 349 124 48 chr2 41319295 41319443 -209368411 + L2 LINE L2 3080 3272 0 1903 167 20 48 chr2 41320327 41320723 -209367131 + MLT1B LTR MaLR 1 385 -5 224 243 0 29 chr2 41320799 41320869 -209366985 + T-rich Low_complexity Low_complexity 5 72 0 255 31 0 0 chr2 41321589 41321621 -209366233 + (TG)n Simple_repeat Simple_repeat 1 32 0 277 273 49 45 chr2 41322531 41322676 -209365178 + MIR SINE MIR 28 185 -63 571 304 25 25 chr2 41322898 41323102 -209364752 - MIR SINE MIR -20 242 39 1216 233 50 52 chr2 41323465 41323941 -209363913 - L1MA9 LINE L1 -38 6274 5800 216 295 0 0 chr2 41324376 41324437 -209363417 + (TG)n Simple_repeat Simple_repeat 1 61 0 1458 115 188 0 chr2 41325094 41325355 -209362499 - MER1A DNA MER1_type 0 529 220 333 270 30 20 chr2 41326544 41326644 -209361210 - MIR SINE MIR -75 187 87 203 243 129 0 chr2 41327301 41327371 -209360483 + MIR SINE MIR 72 150 -112 704 286 181 48 chr2 41327883 41328281 -209359573 - L2 LINE L2 0 3313 2863 189 223 159 102 chr2 41328626 41328783 -209359071 + MIR3 SINE MIR 41 206 -2 212 86 29 0 chr2 41329910 41329945 -209357909 + (TG)n Simple_repeat Simple_repeat 2 37 0 302 245 0 92 chr2 41330041 41330139 -209357715 - L2 LINE L2 0 3272 3184 1926 148 0 36 chr2 41331066 41331370 -209356484 - AluSx SINE Alu -19 293 1 824 179 12 24 chr2 41331470 41331638 -209356216 + FAM SINE Alu 1 166 -9 229 305 12 49 chr2 41331967 41332049 -209355805 - MIR SINE MIR -145 117 39 391 288 57 48 chr2 41332684 41332878 -209354976 + MIR SINE MIR 11 210 -52 2311 81 0 72 chr2 41332947 41333281 -209354573 - AluY SINE Alu -1 310 1 1519 148 17 4 chr2 41333322 41333559 -209354295 - AluJo SINE Alu -12 300 61 2329 70 0 0 chr2 41333777 41334083 -209353771 - AluY SINE Alu 0 306 1 437 341 8 0 chr2 41334879 41335008 -209352846 - MIR3 SINE MIR -21 187 58 335 325 13 13 chr2 41335396 41335553 -209352301 + (TG)n Simple_repeat Simple_repeat 2 158 0 254 281 35 61 chr2 41335595 41335709 -209352145 + MIR SINE MIR 33 143 -119 258 251 52 103 chr2 41335911 41336121 -209351733 - MIR SINE MIR -75 187 3 529 326 48 13 chr2 41337766 41337993 -209349861 + L2 LINE L2 3041 3275 -38 821 230 69 43 chr2 41345765 41346156 -209341698 - MER113 DNA MER1_type? -64 457 57 22 56 0 0 chr2 41346496 41346532 -209341322 + AT_rich Low_complexity Low_complexity 1 36 0 299 254 0 15 chr2 41346590 41346657 -209341197 + L2 LINE L2 3242 3307 -6 210 236 46 196 chr2 41346767 41347093 -209340761 - L2 LINE L2 -95 3177 2901 1741 185 0 13 chr2 41348313 41348615 -209339239 + AluJb SINE Alu 1 298 -14 187 214 71 0 chr2 41349509 41349551 -209338303 + MIR SINE MIR 118 162 -100 437 307 0 0 chr2 41349736 41349850 -209338004 + MIR SINE MIR 33 146 -62 2341 76 0 3 chr2 41351315 41351603 -209336251 + AluSc SINE Alu 1 287 -22 387 364 11 30 chr2 41351786 41352050 -209335804 + L3 LINE CR1 655 913 -664 33 66 0 0 chr2 41352847 41352908 -209334946 + AT_rich Low_complexity Low_complexity 1 61 0 226 274 0 0 chr2 41354135 41354186 -209333668 + (TG)n Simple_repeat Simple_repeat 2 52 0 27 73 0 0 chr2 41357635 41357690 -209330164 + AT_rich Low_complexity Low_complexity 1 55 0 2418 97 0 0 chr2 41359606 41359914 -209327940 - AluSq SINE Alu -5 308 1 353 273 75 44 chr2 41361714 41361873 -209325981 - MIR SINE MIR -37 171 52 443 191 229 46 chr2 41362191 41362322 -209325532 + MER5A DNA MER1_type 33 187 -2 438 299 45 19 chr2 41362397 41362534 -209325320 + MER5B DNA MER1_type 6 149 -29 1490 161 3 74 chr2 41362534 41362833 -209325021 + AluJo SINE Alu 7 284 -28 438 299 45 19 chr2 41362833 41362849 -209325005 + MER5B DNA MER1_type 149 163 -15 229 225 0 0 chr2 41362865 41362905 -209324949 - MER5B DNA MER1_type -127 51 12 22 56 0 0 chr2 41362921 41362957 -209324897 + AT_rich Low_complexity Low_complexity 1 36 0 252 122 0 0 chr2 41363547 41363588 -209324266 + (A)n Simple_repeat Simple_repeat 1 41 0 4102 148 43 28 chr2 41363588 41364443 -209323411 + L1MB7 LINE L1 5317 6184 0 313 373 25 19 chr2 41365324 41365485 -209322369 + MIR SINE MIR 18 179 -83 1998 120 28 3 chr2 41367984 41368268 -209319586 - AluSx SINE Alu -21 291 1 280 230 198 0 chr2 41368270 41368396 -209319458 - L1ME4a LINE L1 -3 6118 5968 383 325 99 0 chr2 41368950 41369101 -209318753 - MIR3 SINE MIR -41 167 2 192 40 0 0 chr2 41369580 41369605 -209318249 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr2 41370414 41370437 -209317417 + AT_rich Low_complexity Low_complexity 1 23 0 189 194 15 90 chr2 41371650 41371717 -209316137 + L2 LINE L2 3201 3262 -10 248 282 14 28 chr2 41371950 41372021 -209315833 - L2 LINE L2 0 3272 3203 342 0 0 0 chr2 41373124 41373162 -209314692 + (TG)n Simple_repeat Simple_repeat 1 38 0 657 63 0 0 chr2 41378828 41378923 -209308931 + (TA)n Simple_repeat Simple_repeat 2 96 0 1892 146 7 40 chr2 41382369 41382670 -209305184 - AluJb SINE Alu -21 291 1 892 189 77 4 chr2 41383357 41383590 -209304264 - MER33 DNA MER1_type -74 250 1 504 125 83 17 chr2 41383797 41383917 -209303937 + L1MA8 LINE L1 6164 6291 0 597 26 0 0 chr2 41384068 41384144 -209303710 - L1PA13 LINE L1 -341 5827 5752 2214 100 16 0 chr2 41384144 41384464 -209303390 + L1PA13 LINE L1 5835 6159 -4 1437 241 112 12 chr2 41385296 41385860 -209301994 + HsTC2 DNA Tc2 1274 1893 -5 21 0 0 0 chr2 41386171 41386192 -209301662 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 41386239 41386260 -209301594 + AT_rich Low_complexity Low_complexity 1 21 0 207 208 62 0 chr2 41387538 41387586 -209300268 - MIR3 SINE MIR -7 201 151 938 290 95 39 chr2 41387622 41388319 -209299535 - L2 LINE L2 -8 3305 2579 1025 226 22 40 chr2 41388320 41388595 -209299259 - L2 LINE L2 -1805 1509 1240 229 178 0 0 chr2 41388630 41388675 -209299179 - MER117 DNA MER1_type -132 65 21 276 364 58 55 chr2 41389962 41390325 -209297529 - L2 LINE L2 -955 2359 1996 2034 141 3 0 chr2 41390938 41391237 -209296617 - AluSc SINE Alu -9 300 1 2027 106 33 23 chr2 41393090 41393392 -209294462 - AluSg SINE Alu -5 305 1 189 205 0 0 chr2 41393782 41393821 -209294033 + MIR SINE MIR 224 262 0 1342 208 24 51 chr2 41393836 41394010 -209293844 - AluJo SINE Alu -26 286 122 2892 16 0 0 chr2 41394010 41394326 -209293528 + AluYb8 SINE Alu 1 316 -2 1342 208 24 51 chr2 41394326 41394445 -209293409 - AluJo SINE Alu -190 122 1 5884 93 14 6 chr2 41394672 41396077 -209291777 - L1PA8 LINE L1 0 6172 4719 277 93 0 0 chr2 41397189 41397232 -209290622 + MADE1 DNA Mariner 38 80 0 252 0 0 0 chr2 41398530 41398558 -209289296 + (T)n Simple_repeat Simple_repeat 1 28 0 186 257 20 10 chr2 41398817 41398918 -209288936 + GA-rich Low_complexity Low_complexity 1 102 0 13237 84 9 0 chr2 41399541 41402180 -209285674 + L1PA7 LINE L1 3501 6152 -2 227 285 32 89 chr2 41403192 41403350 -209284504 - MER5B DNA MER1_type -3 175 27 705 103 34 0 chr2 41403430 41403547 -209284307 + L1P LINE L1 5228 5348 -798 407 335 38 32 chr2 41403882 41404067 -209283787 + MIR SINE MIR 77 262 0 2067 80 53 3 chr2 41406058 41406359 -209281495 + L1PA13 LINE L1 5829 6144 -19 22 0 0 0 chr2 41406360 41406382 -209281472 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 41406717 41406739 -209281115 + AT_rich Low_complexity Low_complexity 1 22 0 383 308 47 30 chr2 41408625 41408794 -209279060 - MIR3 SINE MIR -32 176 5 21 0 0 0 chr2 41409283 41409304 -209278550 + AT_rich Low_complexity Low_complexity 1 21 0 40598 36 22 2 chr2 41411255 41417282 -209270572 - L1PA2 LINE L1 0 6155 5 479 261 83 22 chr2 41418068 41418248 -209269606 - MIR3 SINE MIR -14 194 4 349 133 0 0 chr2 41418293 41418353 -209269501 + Alu SINE Alu 242 301 -1 229 232 0 36 chr2 41419318 41419374 -209268480 - L2 LINE L2 -4 3309 3256 899 192 0 6 chr2 41419385 41419541 -209268313 + FRAM SINE Alu 1 154 -22 2932 165 55 2 chr2 41419596 41420140 -209267714 + L1PA16 LINE L1 5585 6157 -9 231 36 0 0 chr2 41420787 41420815 -209267039 + (TG)n Simple_repeat Simple_repeat 1 28 0 1524 180 21 24 chr2 41421871 41422160 -209265694 + AluJb SINE Alu 18 305 -7 308 219 62 10 chr2 41422935 41423031 -209264823 - MIR SINE MIR -2 260 160 198 0 0 0 chr2 41423220 41423242 -209264612 + (A)n Simple_repeat Simple_repeat 1 22 0 461 263 60 8 chr2 41424540 41424673 -209263181 - MIR SINE MIR -118 144 5 198 0 0 0 chr2 41426089 41426111 -209261743 + (TG)n Simple_repeat Simple_repeat 1 22 0 256 250 61 91 chr2 41426388 41426520 -209261334 - MIR3 SINE MIR -23 185 58 1680 178 36 36 chr2 41426911 41427276 -209260578 + MLT1A1 LTR MaLR 1 365 0 268 304 191 9 chr2 41428865 41428980 -209258874 + MIR SINE MIR 16 151 -111 1936 123 0 31 chr2 41431003 41431296 -209256558 - AluSx SINE Alu -28 284 1 300 318 53 41 chr2 41431354 41431524 -209256330 + L1MC4 LINE L1 6536 6707 -1335 236 300 0 0 chr2 41431573 41431663 -209256191 - L1MC4 LINE L1 -1339 6703 6614 230 104 0 42 chr2 41431672 41431720 -209256134 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 332 253 0 32 chr2 41431720 41431815 -209256039 + L1MC4 LINE L1 6612 6703 -1339 301 326 0 0 chr2 41431792 41431881 -209255973 - L1MC4 LINE L1 -1340 6702 6614 * 401 212 0 10 chr2 41431894 41431993 -209255861 + (TA)n Simple_repeat Simple_repeat 1 98 0 2656 131 21 44 chr2 41431993 41432198 -209255656 + L1MA4 LINE L1 5782 5990 -310 2407 77 3 19 chr2 41432198 41432511 -209255343 + AluSq SINE Alu 1 308 -5 2656 131 21 44 chr2 41432511 41432831 -209255023 + L1MA4 LINE L1 5990 6295 -5 223 281 10 21 chr2 41433613 41433709 -209254145 + CT-rich Low_complexity Low_complexity 4 98 0 293 338 77 8 chr2 41434159 41434326 -209253528 + MIR SINE MIR 19 193 -61 360 64 0 0 chr2 41435664 41435711 -209252143 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 22 0 0 0 chr2 41435873 41435895 -209251959 + AT_rich Low_complexity Low_complexity 1 22 0 2033 136 0 7 chr2 41437212 41437521 -209250333 + AluSx SINE Alu 1 307 -5 262 364 68 8 chr2 41437786 41437904 -209249950 - L3 LINE CR1 -16 1561 1437 745 205 90 13 chr2 41438133 41438289 -209249565 - FRAM SINE Alu -11 165 1 225 333 16 78 chr2 41440569 41440621 -209247233 + L2 LINE L2 3139 3193 -79 2367 88 0 0 chr2 41440621 41440915 -209246939 - AluSc SINE Alu -15 294 1 225 333 16 78 chr2 41440915 41440991 -209246863 + L2 LINE L2 3193 3259 -13 251 218 18 0 chr2 41441272 41441327 -209246527 - L2 LINE L2 0 3313 3258 468 302 99 24 chr2 41441755 41441967 -209245887 + MIR SINE MIR 8 235 -27 216 252 96 43 chr2 41441975 41441991 -209245863 - MIR SINE MIR -33 229 215 7574 25 6 0 chr2 41441991 41443510 -209244344 + L1PA4 LINE L1 4625 6152 -3 216 252 96 43 chr2 41443510 41443608 -209244246 - MIR SINE MIR -47 215 109 320 292 25 17 chr2 41443615 41443735 -209244119 + MLT1I LTR MaLR 52 172 -237 450 235 0 10 chr2 41443829 41443931 -209243923 + MLT1I LTR MaLR 303 403 -6 22823 47 1 0 chr2 41444613 41447610 -209240244 + L1P LINE L1 1107 4107 -2039 180 349 108 0 chr2 41448885 41448968 -209238886 - MIR SINE MIR -66 142 51 347 332 40 5 chr2 41450303 41450502 -209237352 - L1ME3 LINE L1 -336 5826 5621 290 241 26 17 chr2 41450655 41450771 -209237083 - L1ME3 LINE L1 -930 5429 5313 189 261 130 0 chr2 41450793 41450862 -209236992 - MIR SINE MIR -21 241 164 342 283 29 35 chr2 41451055 41451228 -209236626 - L1ME3 LINE L1 -2453 3693 3522 279 259 0 0 chr2 41451566 41451651 -209236203 + GA-rich Low_complexity Low_complexity 4 88 0 23 33 0 0 chr2 41451873 41451903 -209235951 + AT_rich Low_complexity Low_complexity 1 30 0 324 285 73 20 chr2 41451946 41452097 -209235757 - L1MC3 LINE L1 -1860 5925 5767 482 282 43 43 chr2 41452266 41452429 -209235425 - L2 LINE L2 -302 3011 2849 860 45 0 9 chr2 41452429 41452541 -209235313 + L1MA8 LINE L1 5620 5730 -570 1530 145 24 24 chr2 41452545 41452842 -209235012 + L1MA8 LINE L1 5813 6109 -182 474 216 0 0 chr2 41452847 41452935 -209234919 + Tigger3(Golem) DNA MER2_type 11 98 -2931 4045 129 60 7 chr2 41452938 41453682 -209234172 + Tigger3(Golem) DNA MER2_type 2246 3029 0 617 193 84 0 chr2 41453682 41453848 -209234006 + L1MA8 LINE L1 6108 6287 -4 354 204 258 0 chr2 41453942 41454074 -209233780 - L2 LINE L2 -568 2746 2581 285 304 88 53 chr2 41454072 41454243 -209233611 - MIR SINE MIR -60 202 26 * 224 333 0 0 chr2 41454817 41454892 -209232962 - MIR3 SINE MIR -25 183 109 326 289 96 15 chr2 41454995 41455130 -209232724 + MIR SINE MIR 63 208 -54 461 307 13 7 chr2 41455615 41455765 -209232089 + MIR SINE MIR 68 218 -44 2569 180 39 10 chr2 41455765 41456281 -209231573 + MER44D DNA MER2_type 20 605 0 23 0 0 0 chr2 41457437 41457460 -209230394 + AT_rich Low_complexity Low_complexity 1 23 0 446 286 136 23 chr2 41459434 41459654 -209228200 - MIR SINE MIR -15 247 3 2520 49 10 3 chr2 41460315 41460623 -209227231 - AluY SINE Alu 0 311 2 402 241 98 0 chr2 41462268 41462380 -209225474 - L2 LINE L2 -4 3309 3187 21 36 0 0 chr2 41462720 41462748 -209225106 + AT_rich Low_complexity Low_complexity 1 28 0 1974 126 3 7 chr2 41464184 41464485 -209223369 - AluSg SINE Alu -10 300 1 194 119 48 0 chr2 41464572 41464614 -209223240 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 1445 158 217 17 chr2 41464724 41465079 -209222775 - MSTA LTR MaLR 0 428 3 1563 228 17 0 chr2 41465535 41465824 -209222030 - AluJb SINE Alu -18 294 1 1102 186 38 0 chr2 41466059 41466269 -209221585 - MER20 DNA MER1_type 0 219 2 476 270 69 54 chr2 41466618 41467007 -209220847 + L1MC4a LINE L1 5608 6002 -119 753 179 152 33 chr2 41467171 41467355 -209220499 + MER20 DNA MER1_type 4 209 -10 183 42 0 0 chr2 41467542 41467566 -209220288 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 40165 38 23 3 chr2 41467566 41473585 -209214269 - L1PA2 LINE L1 -8 6147 1 260 230 58 58 chr2 41473853 41473940 -209213914 - MLT1L LTR MaLR -362 253 167 4598 141 29 17 chr2 41474018 41474477 -209213377 + L1PA16 LINE L1 5313 5789 -377 2331 71 0 3 chr2 41474477 41474787 -209213067 + AluY SINE Alu 1 309 0 4598 141 29 17 chr2 41474787 41475163 -209212691 + L1PA16 LINE L1 5789 6159 -7 377 232 42 68 chr2 41476980 41477170 -209210684 + L1MEc LINE L1 2187 2371 -4025 1622 173 0 11 chr2 41477341 41477612 -209210242 - AluJb SINE Alu -39 273 6 2504 114 5 16 chr2 41479135 41479503 -209208351 + THE1B LTR MaLR 1 364 0 10723 114 15 6 chr2 41479503 41481070 -209206784 + THE1B-int LTR MaLR 1 1580 0 2023 124 6 32 chr2 41481070 41481417 -209206437 + THE1B LTR MaLR 1 338 -26 4133 169 48 22 chr2 41482088 41482861 -209204993 - MER54B LTR ERVL 0 793 1 754 139 0 0 chr2 41483239 41483361 -209204493 - L1P LINE L1 -4924 1222 1101 21821 51 23 1 chr2 41483361 41486917 -209200937 + L1PA5 LINE L1 2559 6149 -5 330 211 60 15 chr2 41486917 41487020 -209200834 + MIR SINE MIR 112 219 -43 396 278 158 8 chr2 41487264 41487397 -209200457 - L2 LINE L2 -2 3270 3118 385 241 23 0 chr2 41488355 41488442 -209199412 + L2 LINE L2 3221 3309 -4 4909 160 54 14 chr2 41489051 41490259 -209197595 + L1MA6 LINE L1 5058 6300 0 461 243 49 14 chr2 41490320 41490464 -209197390 - MIR SINE MIR -14 248 100 1107 213 97 37 chr2 41490890 41491158 -209196696 + AluJb SINE Alu 6 289 -23 193 263 32 63 chr2 41492464 41492559 -209195295 - L2 LINE L2 -8 3264 3173 395 311 76 44 chr2 41492613 41492928 -209194926 - LTR16C LTR ERVL -93 398 74 228 200 53 53 chr2 41493046 41493121 -209194733 - L1ME4a LINE L1 -82 6039 5965 273 276 17 33 chr2 41493259 41493428 -209194426 - LTR16A LTR ERVL -284 166 1 2165 142 7 0 chr2 41494489 41494858 -209192996 - AluSx SINE Alu 0 371 1 392 269 54 54 chr2 41495164 41495511 -209192343 + MLT1J2 LTR MaLR 26 369 -40 528 326 124 0 chr2 41495564 41495782 -209192072 + MIR SINE MIR 15 259 -3 228 200 91 0 chr2 41496707 41496762 -209191092 + L2 LINE L2 3213 3272 0 223 238 0 0 chr2 41498317 41498382 -209189472 + (TG)n Simple_repeat Simple_repeat 1 65 0 21 57 0 0 chr2 41498858 41498893 -209188961 + AT_rich Low_complexity Low_complexity 1 35 0 306 0 0 0 chr2 41499480 41499514 -209188340 + (T)n Simple_repeat Simple_repeat 1 34 0 778 176 0 50 chr2 41499791 41499950 -209187904 - L1PB4 LINE L1 -2 6154 6004 215 136 45 0 chr2 41501275 41501319 -209186535 + CT-rich Low_complexity Low_complexity 4 49 0 2024 102 4 4 chr2 41501319 41501593 -209186261 - AluSc SINE Alu -35 274 1 321 183 17 0 chr2 41502001 41502061 -209185793 + MLT1D LTR MaLR 1 61 -444 298 275 11 0 chr2 41502058 41502149 -209185705 + MLT1J2 LTR MaLR 535 626 0 * 593 259 113 15 chr2 41502902 41503168 -209184686 + LTR43 LTR ERV1 179 470 -132 2398 88 0 0 chr2 41503188 41503494 -209184360 - AluSc SINE Alu -3 306 1 210 222 0 22 chr2 41504213 41504258 -209183596 + G-rich Low_complexity Low_complexity 4 47 0 2145 120 3 28 chr2 41504314 41504631 -209183223 - AluSp SINE Alu -4 309 1 370 291 259 46 chr2 41504667 41505235 -209182619 + L2 LINE L2 1710 2398 -916 200 220 0 20 chr2 41505448 41505498 -209182356 + T-rich Low_complexity Low_complexity 2 50 0 643 230 34 7 chr2 41507514 41507662 -209180192 + MIR SINE MIR 90 241 -21 1069 279 84 9 chr2 41507744 41508091 -209179763 - L2 LINE L2 -710 2604 2232 272 370 74 59 chr2 41509285 41509555 -209178299 + L2 LINE L2 2998 3271 -1 481 324 62 6 chr2 41509724 41509900 -209177954 + MER5A DNA MER1_type 3 188 -1 314 240 0 62 chr2 41510318 41510414 -209177440 + L1MC4 LINE L1 6614 6703 -1339 303 322 0 0 chr2 41510334 41510424 -209177430 - L1MC4 LINE L1 -1339 6703 6614 * 224 333 103 16 chr2 41510701 41510827 -209177027 + MIR SINE MIR 72 208 -54 690 329 20 15 chr2 41510867 41511268 -209176586 + L1MEc LINE L1 40 442 -5954 497 236 56 6 chr2 41511432 41511610 -209176244 + L1MEc LINE L1 726 912 -5484 966 204 144 51 chr2 41512307 41512641 -209175213 + MLT1A1 LTR MaLR 1 365 0 2130 154 67 9 chr2 41512893 41513341 -209174513 + L1MB2 LINE L1 5696 6169 -2 1954 93 0 30 chr2 41513425 41513693 -209174161 + AluSq SINE Alu 1 260 -53 341 336 16 16 chr2 41513707 41513829 -209174025 - MIR3 SINE MIR -73 135 14 21 0 0 0 chr2 41513939 41513960 -209173894 + AT_rich Low_complexity Low_complexity 1 21 0 3299 191 19 63 chr2 41514194 41515068 -209172786 - L1MA9 LINE L1 -145 6167 5332 208 336 131 33 chr2 41515133 41515255 -209172599 - MIR3 SINE MIR -71 137 4 7242 47 5 1 chr2 41515699 41516704 -209171150 + L1PA5 LINE L1 5143 6151 -3 195 129 0 0 chr2 41517212 41517243 -209170611 + (TG)n Simple_repeat Simple_repeat 1 31 0 630 302 125 0 chr2 41517415 41517647 -209170207 - MIR SINE MIR 0 262 2 3397 116 0 13 chr2 41517989 41518525 -209169329 + L1PA13 LINE L1 5634 6162 -1 743 254 51 11 chr2 41518697 41518874 -209168980 + MER5A DNA MER1_type 5 188 -1 1570 177 69 100 chr2 41519193 41519673 -209168181 - MLT1C LTR MaLR -2 465 1 45 19 0 0 chr2 41519971 41520023 -209167831 + AT_rich Low_complexity Low_complexity 1 52 0 202 275 43 14 chr2 41520049 41520118 -209167736 + MIR SINE MIR 109 179 -83 1386 137 50 0 chr2 41520502 41520721 -209167133 - MER30 DNA MER1_type 0 230 1 503 269 119 40 chr2 41521222 41521423 -209166431 + MIR SINE MIR 20 236 -26 327 25 0 0 chr2 41522777 41522817 -209165037 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 35 0 0 chr2 41523539 41523568 -209164286 + AT_rich Low_complexity Low_complexity 1 29 0 205 29 59 0 chr2 41523595 41523629 -209164225 + (TAA)n Simple_repeat Simple_repeat 3 38 0 1875 127 16 95 chr2 41524858 41525237 -209162617 - L1PA16 LINE L1 -4 6162 5814 15937 179 13 13 chr2 41525242 41525338 -209162516 - L1PA13 LINE L1 -19 7582 7487 2628 93 27 5 chr2 41525338 41525705 -209162149 - THE1C LTR MaLR 0 375 1 15937 179 13 13 chr2 41525705 41529932 -209157922 - L1PA13 LINE L1 -114 7487 1918 2092 121 0 24 chr2 41529932 41530229 -209157625 + AluSq SINE Alu 1 290 -23 15937 179 13 13 chr2 41530229 41532146 -209155708 - L1PA13 LINE L1 -5683 1918 2 3691 173 48 9 chr2 41532147 41533450 -209154404 - L1PA16 LINE L1 -332 5834 4476 288 70 0 0 chr2 41533577 41533620 -209154234 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 2051 53 19 0 chr2 41533627 41533893 -209153961 - L1PA7 LINE L1 -3 6151 5881 11684 92 9 1 chr2 41533923 41535698 -209152156 - L1P3 LINE L1 -645 5509 3721 1407 203 125 24 chr2 41535699 41536122 -209151732 - L1 LINE L1 -1662 4484 4019 193 296 136 34 chr2 41536151 41536239 -209151615 - MIR SINE MIR -123 139 43 297 244 130 93 chr2 41536416 41536662 -209151192 - MLT1K LTR MaLR -51 537 283 275 281 55 31 chr2 41537050 41537178 -209150676 + MIR3 SINE MIR 24 154 -54 22 35 0 0 chr2 41537319 41537348 -209150506 + AT_rich Low_complexity Low_complexity 1 29 0 230 271 41 82 chr2 41538816 41538938 -209148916 - MIR SINE MIR -50 212 96 2002 139 7 0 chr2 41539669 41539964 -209147890 + AluSx SINE Alu 1 297 -15 21266 158 35 14 chr2 41539982 41544751 -209143103 - L1MA3 LINE L1 -400 7324 2348 1615 201 10 0 chr2 41544751 41545054 -209142800 - AluJb SINE Alu -2 310 5 21266 158 35 14 chr2 41545054 41547440 -209140414 - L1MA3 LINE L1 -5376 2348 14 787 155 92 6 chr2 41548336 41548510 -209139344 - MER53 DNA DNA 0 189 1 380 256 12 113 chr2 41548511 41548671 -209139183 - MER5B DNA MER1_type -34 144 1 231 153 0 51 chr2 41549650 41549709 -209138145 + L1MA3 LINE L1 6250 6305 0 293 287 96 38 chr2 41550168 41550325 -209137529 + MIR SINE MIR 8 173 -89 207 0 0 0 chr2 41550327 41550350 -209137504 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2202 107 0 0 chr2 41550352 41550641 -209137213 - AluSg SINE Alu -21 289 1 191 59 0 29 chr2 41550648 41550682 -209137172 + (TTTTTA)n Simple_repeat Simple_repeat 4 36 0 1133 260 24 0 chr2 41551079 41551333 -209136521 - MIR SINE MIR -1 261 2 2073 107 23 7 chr2 41551485 41551793 -209136061 + L1PA13 LINE L1 5837 6149 -14 680 313 45 4 chr2 41553941 41554187 -209133667 + MIR SINE MIR 1 256 -6 1917 169 49 53 chr2 41554263 41554731 -209133123 - MER31B LTR ERV1 0 466 1 582 295 33 40 chr2 41554773 41554994 -209132860 - MIR SINE MIR -7 255 38 293 384 0 0 chr2 41556014 41556113 -209131741 + L2 LINE L2 3174 3272 0 21 57 0 0 chr2 41557234 41557269 -209130585 + AT_rich Low_complexity Low_complexity 1 35 0 709 198 42 68 chr2 41560732 41560924 -209126930 - MER5A DNA MER1_type 0 189 3 648 118 0 0 chr2 41565222 41565315 -209122539 + AluS SINE Alu 1 93 -219 960 18 0 0 chr2 41566161 41566270 -209121584 + AluYa5/8 SINE Alu 197 305 -5 26 0 0 0 chr2 41566835 41566861 -209120993 + AT_rich Low_complexity Low_complexity 1 26 0 326 268 0 31 chr2 41572018 41572115 -209115739 + L2 LINE L2 3189 3282 -31 191 125 25 0 chr2 41573852 41573892 -209113962 + A-rich Low_complexity Low_complexity 2 42 0 214 143 20 20 chr2 41574157 41574206 -209113648 + (TA)n Simple_repeat Simple_repeat 2 50 0 193 353 88 12 chr2 41574889 41575059 -209112795 + MER5A DNA MER1_type 7 189 0 2390 35 3 0 chr2 41575282 41575571 -209112283 - L1PA2 LINE L1 -4 6151 5862 588 252 117 33 chr2 41575844 41576058 -209111796 + MIR SINE MIR 4 235 -27 2072 110 0 63 chr2 41576228 41576546 -209111308 + AluSx SINE Alu 1 298 -14 290 342 106 15 chr2 41577024 41577223 -209110631 - MIR SINE MIR -24 238 22 261 0 0 0 chr2 41577573 41577602 -209110252 + (T)n Simple_repeat Simple_repeat 1 29 0 315 276 200 0 chr2 41579389 41579494 -209108360 + MIR3 SINE MIR 60 185 -23 514 301 16 48 chr2 41579859 41579943 -209107911 + MER5A DNA MER1_type 8 93 -96 1455 80 0 15 chr2 41579943 41580143 -209107711 - MER107 DNA MER1_type 0 197 1 514 301 16 48 chr2 41580143 41580244 -209107610 + MER5A DNA MER1_type 93 187 -2 317 174 163 0 chr2 41580594 41580686 -209107168 + MIR SINE MIR 156 262 0 306 264 186 0 chr2 41633736 41633865 -209053989 + L2 LINE L2 3161 3313 0 237 236 95 95 chr2 41633891 41634039 -209053815 - MIR SINE MIR -12 250 103 354 311 25 17 chr2 41634494 41634613 -209053241 + MER5A DNA MER1_type 70 189 0 562 28 0 0 chr2 41636028 41636099 -209051755 - L1PA3 LINE L1 -3 6152 6082 2145 196 34 24 chr2 41636519 41637019 -209050835 - MLT1D LTR MaLR 0 505 1 1003 240 80 90 chr2 41637171 41637933 -209049921 + L2 LINE L2 2555 3313 0 197 250 200 0 chr2 41637931 41638011 -209049843 - L2 LINE L2 -8 3264 3169 * 1798 176 3 6 chr2 41638084 41638397 -209049457 - AluJo SINE Alu 0 312 1 2369 91 0 0 chr2 41639172 41639470 -209048384 - AluSg SINE Alu -12 298 1 1047 98 0 0 chr2 41639489 41639622 -209048232 - AluSp SINE Alu -180 133 1 263 275 7 113 chr2 41641839 41641981 -209045873 + MIR SINE MIR 86 212 -50 358 263 13 155 chr2 41643397 41643489 -209044365 + MIR SINE MIR 63 104 -158 2124 103 7 3 chr2 41643489 41643780 -209044074 + AluSx SINE Alu 2 293 -19 358 263 13 155 chr2 41643780 41643919 -209043935 + MIR SINE MIR 104 261 -1 309 252 36 54 chr2 41643951 41644062 -209043792 - L1MC4 LINE L1 -1321 6721 6613 536 253 137 44 chr2 41644076 41644258 -209043596 - MIR SINE MIR -24 238 40 2206 93 0 0 chr2 41644418 41644745 -209043109 + AluSc SINE Alu 1 327 0 24 77 0 0 chr2 41645061 41645113 -209042741 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr2 41646481 41646503 -209041351 + (A)n Simple_repeat Simple_repeat 1 22 0 415 373 101 29 chr2 41646786 41647102 -209040752 - L2 LINE L2 -18 3254 2916 366 261 17 6 chr2 41650417 41650593 -209037261 + (TA)n Simple_repeat Simple_repeat 1 178 0 300 267 11 11 chr2 41650594 41650684 -209037170 - L1MC4 LINE L1 -1339 6703 6614 287 214 20 0 chr2 41650685 41650845 -209037009 + (TA)n Simple_repeat Simple_repeat 1 163 0 180 97 0 0 chr2 41650871 41650902 -209036952 + (TA)n Simple_repeat Simple_repeat 1 31 0 369 305 175 7 chr2 41651347 41651501 -209036353 - MIR SINE MIR -79 183 4 283 257 48 67 chr2 41652274 41652379 -209035475 + L2 LINE L2 3211 3313 0 342 0 0 0 chr2 41653812 41653850 -209034004 + (TG)n Simple_repeat Simple_repeat 1 38 0 636 219 115 31 chr2 41654791 41654983 -209032871 - MER63A DNA MER1_type -2 208 1 231 36 0 0 chr2 41655064 41655092 -209032762 + (TA)n Simple_repeat Simple_repeat 2 29 0 689 154 15 59 chr2 41655094 41655230 -209032624 - FLAM_C SINE Alu -8 135 6 1958 119 3 35 chr2 41655798 41656092 -209031762 + AluSx SINE Alu 1 286 -26 297 0 0 0 chr2 41656092 41656125 -209031729 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 1958 119 3 35 chr2 41656125 41656142 -209031712 + AluSx SINE Alu 286 302 -10 245 259 0 17 chr2 41659293 41659351 -209028503 + L2 LINE L2 2921 2977 -336 22 56 0 0 chr2 41659551 41659587 -209028267 + AT_rich Low_complexity Low_complexity 1 36 0 311 215 207 16 chr2 41660362 41660483 -209027371 + L1MC/D LINE L1 5609 5752 -2056 469 298 138 6 chr2 41660507 41660688 -209027166 - MIR SINE MIR -16 246 42 180 111 0 0 chr2 41660779 41660806 -209027048 + (GGGAGA)n Simple_repeat Simple_repeat 2 28 0 1921 152 0 10 chr2 41661335 41661632 -209026222 - AluJo SINE Alu -18 294 1 28 29 0 0 chr2 41662872 41662907 -209024947 + AT_rich Low_complexity Low_complexity 1 35 0 598 345 71 35 chr2 41662913 41663365 -209024489 - L3 LINE CR1 -744 833 366 257 304 74 30 chr2 41663530 41663665 -209024189 + MIR3 SINE MIR 54 194 -14 2029 141 3 10 chr2 41664113 41664411 -209023443 - AluSx SINE Alu -16 296 1 192 286 42 59 chr2 41666252 41666371 -209021483 + MIR3 SINE MIR 88 204 -4 447 370 17 6 chr2 41666448 41666621 -209021233 - MIR SINE MIR -30 232 58 606 284 74 5 chr2 41667388 41667603 -209020251 - MIR SINE MIR -1 261 32 1324 85 0 0 chr2 41667675 41667864 -209019990 + L1PB1 LINE L1 5846 6034 -117 497 139 0 0 chr2 41667864 41667936 -209019918 + AluS SINE Alu 1 72 -241 2414 101 0 25 chr2 41667977 41668101 -209019753 - L1PB1 LINE L1 -1 6150 6024 1848 148 28 0 chr2 41668101 41668261 -209019593 - AluSx SINE Alu -21 291 118 387 0 0 0 chr2 41668261 41668304 -209019550 + (TG)n Simple_repeat Simple_repeat 2 44 0 1848 148 28 0 chr2 41668304 41668426 -209019428 - AluSx SINE Alu -194 118 1 2414 101 0 25 chr2 41668426 41668667 -209019187 - L1PB1 LINE L1 -127 6024 5794 261 0 0 0 chr2 41668667 41668696 -209019158 + (TG)n Simple_repeat Simple_repeat 2 30 0 318 226 0 43 chr2 41668735 41668828 -209019026 - L1MC4 LINE L1 -1340 6702 6614 1750 107 11 0 chr2 41668834 41669105 -209018749 - L1P5 LINE L1 -360 5791 5518 333 58 2 0 chr2 41669104 41669153 -209018701 + L1P5 LINE L1 5426 5469 -682 * 638 190 141 0 chr2 41671184 41671345 -209016509 - MER5A DNA MER1_type 0 189 4 679 221 55 0 chr2 41671511 41671674 -209016180 - MER20 DNA MER1_type -6 213 42 182 352 28 0 chr2 41673009 41673080 -209014774 + MIR SINE MIR 91 163 -99 2273 168 58 18 chr2 41673228 41673376 -209014478 + L1MB2 LINE L1 5644 5785 -386 360 43 0 0 chr2 41673376 41673422 -209014432 + (CA)n Simple_repeat Simple_repeat 2 47 0 2273 168 58 18 chr2 41673422 41673773 -209014081 + L1MB2 LINE L1 5785 6163 -8 259 143 52 39 chr2 41674207 41674284 -209013570 + A-rich Low_complexity Low_complexity 2 79 0 196 286 20 0 chr2 41675057 41675106 -209012748 + L3b LINE CR1 1429 1478 -105 2253 116 3 0 chr2 41675726 41676029 -209011825 - AluSg SINE Alu -2 308 5 1666 151 62 3 chr2 41676042 41676366 -209011488 - L1MB7 LINE L1 -16 6168 5826 333 311 30 15 chr2 41676815 41676947 -209010907 - MIR3 SINE MIR -3 205 72 34 0 0 0 chr2 41677603 41677637 -209010217 + AT_rich Low_complexity Low_complexity 1 34 0 283 246 22 78 chr2 41677815 41677994 -209009860 + L1ME4a LINE L1 5947 6115 -6 210 291 73 0 chr2 41678566 41678621 -209009233 + MER91C DNA MER1_type 36 94 -46 21 0 0 0 chr2 41678768 41678789 -209009065 + AT_rich Low_complexity Low_complexity 1 21 0 264 155 31 72 chr2 41679088 41679185 -209008669 - L1MA10 LINE L1 -2 6332 6240 206 211 35 18 chr2 41679187 41679244 -209008610 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 268 250 42 0 chr2 41679248 41679273 -209008581 - L1MA10 LINE L1 -81 6253 6229 3945 229 75 36 chr2 41679273 41679804 -209008050 - L1ME1 LINE L1 -100 6066 5557 818 143 0 16 chr2 41679804 41679930 -209007924 - FLAM_C SINE Alu -7 126 3 3945 229 75 36 chr2 41679930 41681522 -209006332 - L1ME1 LINE L1 -609 5557 3854 201 286 181 30 chr2 41683112 41683245 -209004609 + L2 LINE L2 3087 3239 -74 303 313 38 44 chr2 41684423 41684583 -209003271 - MER5A DNA MER1_type 0 189 31 379 332 133 5 chr2 41684616 41684827 -209003027 - MIR SINE MIR -23 239 2 607 301 97 65 chr2 41685851 41686223 -209001631 - L3 LINE CR1 -175 1402 1019 216 135 0 0 chr2 41686318 41686355 -209001499 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2782 91 11 3 chr2 41687700 41688072 -208999782 - THE1C LTR MaLR 0 375 1 1505 176 3 62 chr2 41688605 41688942 -208998912 + AluJo SINE Alu 1 319 0 328 20 41 0 chr2 41689051 41689100 -208998754 + (CA)n Simple_repeat Simple_repeat 2 52 0 219 211 127 14 chr2 41689104 41689175 -208998679 - MIR SINE MIR -70 192 114 23 0 0 0 chr2 41689236 41689259 -208998595 + AT_rich Low_complexity Low_complexity 1 23 0 329 275 69 46 chr2 41690204 41690335 -208997519 + MER94 DNA DNA 1 134 0 216 161 48 0 chr2 41690876 41690938 -208996916 + CT-rich Low_complexity Low_complexity 3 67 0 1109 84 42 110 chr2 41691889 41692080 -208995774 + AluY SINE Alu 1 178 -133 25 0 0 0 chr2 41693321 41693346 -208994508 + AT_rich Low_complexity Low_complexity 1 25 0 408 275 118 22 chr2 41693458 41693687 -208994167 - L1ME LINE L1 -297 5824 5574 2432 93 39 3 chr2 41693788 41694143 -208993711 + L1PA16 LINE L1 5790 6157 -9 288 358 169 26 chr2 41694454 41695283 -208992571 + L2 LINE L2 1907 2853 -461 384 22 0 0 chr2 41695290 41695335 -208992519 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 32 0 0 chr2 41696318 41696349 -208991505 + AT_rich Low_complexity Low_complexity 1 31 0 360 270 25 69 chr2 41697321 41697480 -208990374 + MIR SINE MIR 111 262 0 2187 71 14 11 chr2 41697802 41698122 -208989732 - AluSx SINE Alu 0 321 1 698 187 8 15 chr2 41698209 41698343 -208989511 - FRAM SINE Alu -43 133 1 2442 84 0 0 chr2 41699386 41699697 -208988157 + AluY SINE Alu 1 311 0 2000 133 10 0 chr2 41699997 41700299 -208987555 + AluSq SINE Alu 1 305 -8 296 271 65 37 chr2 41700355 41700462 -208987392 - MIR3 SINE MIR -5 203 94 21 0 0 0 chr2 41701024 41701045 -208986809 + AT_rich Low_complexity Low_complexity 1 21 0 501 259 105 6 chr2 41703020 41703182 -208984672 + MIR SINE MIR 15 192 -70 319 111 16 16 chr2 41704301 41704364 -208983490 + (TC)n Simple_repeat Simple_repeat 2 64 0 254 288 0 0 chr2 41704560 41704619 -208983235 + (TG)n Simple_repeat Simple_repeat 1 59 0 268 211 132 13 chr2 41706161 41706237 -208981617 + MER103 DNA DNA 30 114 -52 2205 118 0 0 chr2 41706508 41706804 -208981050 + AluSx SINE Alu 1 296 -16 198 103 0 0 chr2 41707527 41707556 -208980298 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 243 314 48 19 chr2 41707835 41707940 -208979914 + MIR SINE MIR 86 193 -69 1130 215 63 70 chr2 41708202 41708630 -208979224 + LTR37B LTR ERV1 38 462 -6 229 341 133 0 chr2 41709192 41709327 -208978527 + MIR3 SINE MIR 43 195 -13 266 277 0 30 chr2 41709395 41709496 -208978358 - MER103 DNA DNA -66 100 3 228 271 14 0 chr2 41709689 41709759 -208978095 - MIR SINE MIR -5 257 187 2824 65 0 3 chr2 41711883 41712255 -208975599 + L1PA8 LINE L1 5802 6172 0 321 89 0 0 chr2 41712277 41712322 -208975532 + (A)n Simple_repeat Simple_repeat 1 45 0 378 257 18 18 chr2 41712598 41712707 -208975147 + MER5A DNA MER1_type 41 149 -40 21 0 0 0 chr2 41713176 41713197 -208974657 + AT_rich Low_complexity Low_complexity 1 21 0 255 258 91 0 chr2 41713329 41713395 -208974459 + MIR SINE MIR 45 116 -146 578 233 8 8 chr2 41713398 41713527 -208974327 - FRAM SINE Alu -46 130 2 469 313 57 23 chr2 41713659 41713835 -208974019 + MIR SINE MIR 21 202 -60 393 322 66 22 chr2 41714380 41714563 -208973291 + MIR3 SINE MIR 3 193 -15 854 269 28 5 chr2 41715687 41715899 -208971955 + MIR SINE MIR 34 250 -12 1649 186 3 10 chr2 41716429 41716720 -208971134 + AluJo SINE Alu 1 289 -23 297 0 0 0 chr2 41716817 41716850 -208971004 + (A)n Simple_repeat Simple_repeat 1 33 0 672 322 42 4 chr2 41717010 41717246 -208970608 - MIR SINE MIR -12 250 6 206 345 95 26 chr2 41718754 41718870 -208968984 + L3b LINE CR1 1427 1550 -33 968 272 78 12 chr2 41720216 41720547 -208967307 - L1MC/D LINE L1 -2097 5711 5359 312 289 0 0 chr2 41721255 41721345 -208966509 + MER103 DNA DNA 2 91 -75 205 191 21 0 chr2 41721529 41721576 -208966278 + MIR SINE MIR 98 145 -117 309 285 136 76 chr2 41722253 41722569 -208965285 + L2 LINE L2 2938 3272 0 1814 138 17 34 chr2 41723451 41723747 -208964107 + AluJo SINE Alu 13 303 -9 844 93 0 23 chr2 41723801 41723930 -208963924 + L1PA7 LINE L1 6026 6151 -3 207 0 0 0 chr2 41724278 41724301 -208963553 + (A)n Simple_repeat Simple_repeat 1 23 0 218 156 22 0 chr2 41724373 41724418 -208963436 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 185 136 0 23 chr2 41724862 41724906 -208962948 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1201 170 90 7 chr2 41725348 41725625 -208962229 + MER33 DNA MER1_type 25 324 0 226 357 195 11 chr2 41725635 41725907 -208961947 - L2 LINE L2 -503 2811 2490 404 244 134 24 chr2 41726247 41726374 -208961480 - MIR SINE MIR -10 252 112 366 327 10 10 chr2 41726377 41726478 -208961376 + L2 LINE L2 3153 3253 -19 743 217 74 93 chr2 41726717 41726975 -208960879 - MIR SINE MIR 0 262 10 2145 114 20 0 chr2 41728118 41728424 -208959430 - AluSx SINE Alu 0 312 1 1111 312 39 31 chr2 41728817 41729307 -208958547 - MER20B DNA MER1_type -287 496 3 216 0 0 0 chr2 41729567 41729591 -208958263 + (ATG)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr2 41730128 41730148 -208957706 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 207 69 0 0 chr2 41730580 41730609 -208957245 + (TG)n Simple_repeat Simple_repeat 2 30 0 1449 219 21 3 chr2 41731948 41732236 -208955618 + AluJo SINE Alu 1 293 -19 464 246 115 8 chr2 41732337 41732467 -208955387 + MIR SINE MIR 109 252 -10 195 274 251 74 chr2 41732576 41732751 -208955103 + MIR SINE MIR 56 261 -1 * 367 273 29 46 chr2 41732734 41732940 -208954914 - MIR SINE MIR -49 213 16 1933 314 77 18 chr2 41733850 41734772 -208953082 - L3 LINE CR1 -420 1157 182 1022 82 129 12 chr2 41734834 41735005 -208952849 - L1PA13 LINE L1 -19 6144 5954 2672 184 4 0 chr2 41735005 41735515 -208952339 + L1P LINE L1 4728 5239 -907 248 200 100 44 chr2 41736989 41737079 -208950775 - MIR SINE MIR -50 212 118 390 317 0 28 chr2 41737717 41737862 -208949992 + MIR SINE MIR 119 259 -3 395 356 29 0 chr2 41739745 41739919 -208947935 - MIR SINE MIR -7 255 77 650 188 0 0 chr2 41740459 41740576 -208947278 + FLAM_C SINE Alu 1 117 -26 22 0 0 0 chr2 41740577 41740599 -208947255 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 41740599 41740621 -208947233 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 187 397 43 9 chr2 41740784 41740900 -208946954 - L2 LINE L2 -641 2673 2554 1619 196 7 0 chr2 41741950 41742254 -208945600 + AluJo SINE Alu 1 306 0 238 80 40 40 chr2 41742796 41742846 -208945008 + GA-rich Low_complexity Low_complexity 2 51 0 1826 223 152 49 chr2 41743137 41743730 -208944124 + MLT1E1 LTR MaLR 1 654 0 1158 273 128 36 chr2 41744245 41744785 -208943069 - L2 LINE L2 0 3313 2723 766 279 78 41 chr2 41744965 41745352 -208942502 + L2 LINE L2 2910 3310 -3 683 267 40 0 chr2 41745384 41745534 -208942320 - MER5A DNA MER1_type -33 156 1 225 309 32 63 chr2 41746364 41746490 -208941364 - MIR SINE MIR -78 184 63 182 152 0 0 chr2 41747459 41747492 -208940362 + L2 LINE L2 3018 3050 -222 3340 112 12 2 chr2 41747842 41748334 -208939520 + LOR1a LTR ERV1 1 497 0 22 0 0 0 chr2 41749048 41749070 -208938784 + AT_rich Low_complexity Low_complexity 1 22 0 188 267 167 83 chr2 41749710 41749890 -208937964 - MIR SINE MIR 0 262 68 1318 196 55 41 chr2 41750208 41750499 -208937355 + AluJo SINE Alu 1 295 -17 23 0 0 0 chr2 41750883 41750906 -208936948 + AT_rich Low_complexity Low_complexity 1 23 0 249 286 94 37 chr2 41751904 41752149 -208935705 + L1ME4a LINE L1 5561 5819 -302 364 319 84 11 chr2 41752351 41752542 -208935312 + L1ME4a LINE L1 5902 6106 -15 21 36 0 0 chr2 41752838 41752866 -208934988 + AT_rich Low_complexity Low_complexity 1 28 0 2046 137 3 0 chr2 41753893 41754192 -208933662 + AluSx SINE Alu 9 308 -4 246 336 9 0 chr2 41755235 41755345 -208932509 + (TA)n Simple_repeat Simple_repeat 1 111 0 218 0 0 87 chr2 41756036 41756082 -208931772 + (TA)n Simple_repeat Simple_repeat 2 43 0 222 37 0 0 chr2 41756159 41756186 -208931668 + (CA)n Simple_repeat Simple_repeat 2 28 0 292 255 20 20 chr2 41756212 41756310 -208931544 - L1ME LINE L1 -254 5867 5770 767 257 16 0 chr2 41756675 41756858 -208930996 + MER5A DNA MER1_type 2 187 -2 219 188 0 0 chr2 41757372 41757420 -208930434 + (TA)n Simple_repeat Simple_repeat 2 49 0 495 218 12 8 chr2 41758260 41758509 -208929345 + GA-rich Low_complexity Low_complexity 1 250 0 896 186 69 20 chr2 41760188 41760392 -208927462 + MER20 DNA MER1_type 1 214 -5 230 56 28 0 chr2 41760672 41760708 -208927146 + (TG)n Simple_repeat Simple_repeat 1 37 0 229 242 45 0 chr2 41761880 41761946 -208925908 - HAL1b LINE L1 -276 1072 1004 21 0 0 0 chr2 41762370 41762391 -208925463 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 41762978 41763007 -208924847 + (A)n Simple_repeat Simple_repeat 1 29 0 289 308 26 0 chr2 41763336 41763414 -208924440 + MIR SINE MIR 168 247 -15 207 304 0 51 chr2 41763837 41763916 -208923938 + MER5B DNA MER1_type 7 81 -97 21 0 0 0 chr2 41764807 41764828 -208923026 + AT_rich Low_complexity Low_complexity 1 21 0 237 203 68 0 chr2 41764964 41765023 -208922831 - L1ME LINE L1 -2042 5766 5704 1917 181 68 32 chr2 41766051 41766493 -208921361 + LTR2B LTR ERV1 32 489 -1 211 341 12 0 chr2 41767499 41767581 -208920273 + L2 LINE L2 2892 2974 -298 261 83 0 0 chr2 41767797 41767833 -208920021 + (A)n Simple_repeat Simple_repeat 1 36 0 3641 125 58 3 chr2 41768199 41768801 -208919053 + MER41B LTR ERV1 1 635 0 672 183 16 8 chr2 41770298 41770424 -208917430 - FLAM_C SINE Alu -6 127 1 21 0 0 0 chr2 41772615 41772636 -208915218 + AT_rich Low_complexity Low_complexity 1 21 0 289 222 38 162 chr2 41773204 41773313 -208914541 + MIR3 SINE MIR 17 95 -113 1970 128 3 0 chr2 41773313 41773595 -208914259 - AluSx SINE Alu -29 283 1 289 222 38 162 chr2 41773595 41773670 -208914184 + MIR3 SINE MIR 95 178 -30 193 314 157 0 chr2 41773927 41773997 -208913857 + L2 LINE L2 3184 3264 -8 36 62 0 0 chr2 41776764 41776828 -208911026 + AT_rich Low_complexity Low_complexity 1 64 0 488 138 85 0 chr2 41776836 41776930 -208910924 - L1MA8 LINE L1 -42 6249 6148 214 316 132 23 chr2 41777024 41777198 -208910656 - MIR SINE MIR -50 212 20 229 273 18 0 chr2 41777378 41777433 -208910421 - MARNA DNA Mariner -395 191 136 187 286 0 0 chr2 41777488 41777530 -208910324 + L2 LINE L2 3215 3256 -16 263 291 15 45 chr2 41777664 41777798 -208910056 + L1ME LINE L1 5588 5717 -404 356 329 36 16 chr2 41778128 41778380 -208909474 - MIR SINE MIR -3 259 3 1238 61 18 0 chr2 41779135 41779298 -208908556 - L1PA4 LINE L1 -4 6151 5986 3586 17 0 2 chr2 41779298 41779708 -208908146 + L1PA4 LINE L1 5459 5867 -288 228 336 48 10 chr2 41780661 41780765 -208907089 - L3 LINE CR1 -627 950 843 1597 94 49 130 chr2 41781945 41782089 -208905765 + AluSx SINE Alu 21 128 -184 477 0 0 0 chr2 41782089 41782142 -208905712 + (CA)n Simple_repeat Simple_repeat 2 54 0 1597 94 49 130 chr2 41782142 41782305 -208905549 + AluSx SINE Alu 128 303 -9 456 187 0 0 chr2 41782388 41782463 -208905391 - MER94 DNA DNA -59 75 1 444 127 25 13 chr2 41783029 41783108 -208904746 - MADE1 DNA Mariner 0 80 1 954 103 7 19 chr2 41783390 41783545 -208904309 - L1PA15 LINE L1 -2 6163 6011 1054 159 0 0 chr2 41783729 41783892 -208903962 - AluJb SINE Alu -3 309 147 232 348 0 14 chr2 41783892 41783961 -208903893 - MIR SINE MIR -188 74 7 225 0 0 0 chr2 41784100 41784125 -208903729 + (CA)n Simple_repeat Simple_repeat 2 26 0 273 414 29 0 chr2 41785286 41785426 -208902428 + L2 LINE L2 3129 3272 0 443 295 7 0 chr2 41785673 41785812 -208902042 + CT-rich Low_complexity Low_complexity 1 140 0 525 238 63 0 chr2 41787106 41787232 -208900622 + MIR SINE MIR 56 189 -73 428 237 0 6 chr2 41787285 41787454 -208900400 + (CCA)n Simple_repeat Simple_repeat 1 168 0 285 285 66 16 chr2 41787490 41787635 -208900219 - MIR SINE MIR -55 153 2 316 295 230 7 chr2 41789080 41789219 -208898635 + MIR SINE MIR 50 219 -43 26 50 0 0 chr2 41791515 41791555 -208896299 + AT_rich Low_complexity Low_complexity 1 40 0 982 47 0 0 chr2 41792077 41792204 -208895650 + L1P4 LINE L1 5614 5740 -428 222 118 0 0 chr2 41793720 41793754 -208894100 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 270 0 0 0 chr2 41794653 41794683 -208893171 + (CA)n Simple_repeat Simple_repeat 1 30 0 1037 262 97 44 chr2 41798400 41798631 -208889223 - L2 LINE L2 0 3313 3096 246 81 0 0 chr2 41798631 41798668 -208889186 + (TG)n Simple_repeat Simple_repeat 2 38 0 1037 262 97 44 chr2 41798668 41799082 -208888772 - L2 LINE L2 -217 3096 2632 330 276 59 46 chr2 41799333 41799485 -208888369 + L2 LINE L2 2664 2817 -497 230 204 93 0 chr2 41799770 41799824 -208888030 - MER91C DNA MER1_type -53 87 29 410 303 45 0 chr2 41799826 41799958 -208887896 - MIR SINE MIR -78 184 47 595 236 22 87 chr2 41801966 41802004 -208885850 + L2 LINE L2 3099 3138 -175 1718 136 61 41 chr2 41802004 41802299 -208885555 - AluSq SINE Alu -12 301 1 595 236 22 87 chr2 41802299 41802489 -208885365 + L2 LINE L2 3138 3312 -1 518 276 84 42 chr2 41803182 41803396 -208884458 - MIR SINE MIR 0 262 40 340 323 62 31 chr2 41804662 41804792 -208883062 - L2 LINE L2 -1 3271 3138 418 289 108 6 chr2 41804926 41805092 -208882762 - MER5A DNA MER1_type 0 189 7 402 351 38 0 chr2 41806702 41806833 -208881021 - L2 LINE L2 0 3272 3137 8156 112 20 8 chr2 41806862 41808196 -208879658 + L1PA8 LINE L1 3841 5190 -956 655 76 0 42 chr2 41808195 41808274 -208879580 - L1P4 LINE L1 -377 5778 5713 * 1390 36 0 0 chr2 41808274 41808439 -208879415 + L1PA3 LINE L1 5988 6152 -3 655 76 0 42 chr2 41808439 41808488 -208879366 - L1P4 LINE L1 -442 5713 5664 6314 95 4 8 chr2 41808509 41809507 -208878347 + L1PA8 LINE L1 5172 6165 -7 346 315 102 8 chr2 41809902 41810029 -208877825 + MIR3 SINE MIR 27 165 -43 234 320 23 81 chr2 41810257 41810284 -208877570 - MIR3 SINE MIR -26 182 155 1778 164 10 23 chr2 41810284 41810588 -208877266 + AluJo SINE Alu 1 300 -12 234 320 23 81 chr2 41810588 41810732 -208877122 - MIR3 SINE MIR -53 155 21 1081 261 56 0 chr2 41810817 41811123 -208876731 + MER58B DNA MER1_type 1 323 -18 503 275 34 17 chr2 41811270 41811448 -208876406 - MIR SINE MIR 0 262 82 450 274 51 40 chr2 41862487 41862662 -208825192 - MER5B DNA MER1_type 0 178 2 865 124 16 163 chr2 41863142 41863399 -208824455 + L1MA10 LINE L1 6106 6324 -10 249 220 140 60 chr2 41863464 41863564 -208824290 + MIR SINE MIR 42 149 -113 353 290 67 67 chr2 41863628 41863897 -208823957 + L1ME4a LINE L1 5617 5885 -236 233 237 68 76 chr2 41864151 41864269 -208823585 + L1ME4a LINE L1 6003 6119 -2 282 164 0 0 chr2 41864294 41864349 -208823505 + (TA)n Simple_repeat Simple_repeat 2 56 0 287 338 23 44 chr2 41865374 41865558 -208822296 + MER5A DNA MER1_type 5 188 -1 377 278 104 0 chr2 41866539 41866654 -208821200 + MIR SINE MIR 126 252 -10 260 283 86 46 chr2 41868546 41868698 -208819156 - L2 LINE L2 0 3313 3156 218 168 42 42 chr2 41868775 41868870 -208818984 + (TTATA)n Simple_repeat Simple_repeat 3 97 0 1805 182 55 3 chr2 41869084 41869431 -208818423 + MLT1A1 LTR MaLR 1 365 0 417 313 17 68 chr2 41869846 41870022 -208817832 + MER91B DNA MER1_type 20 186 -4 201 194 60 0 chr2 41870186 41870204 -208817650 + A-rich Low_complexity Low_complexity 3 18 -55 2137 111 3 0 chr2 41870204 41870492 -208817362 + AluSx SINE Alu 1 289 -23 201 194 60 0 chr2 41870492 41870540 -208817314 + A-rich Low_complexity Low_complexity 18 73 0 525 280 103 73 chr2 41871496 41872282 -208815572 - L2 LINE L2 -198 3115 2201 21 36 0 0 chr2 41872425 41872453 -208815401 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 41872618 41872646 -208815208 + AT_rich Low_complexity Low_complexity 1 28 0 199 294 10 39 chr2 41872808 41872910 -208814944 + L2 LINE L2 1732 1830 -1484 460 305 111 11 chr2 41873933 41874123 -208813731 - MIR SINE MIR -43 219 11 1963 149 3 0 chr2 41876093 41876389 -208811465 + AluSp SINE Alu 1 297 -16 5254 189 9 3 chr2 41876406 41877350 -208810504 - MSTB-int LTR MaLR -701 950 1 2171 185 37 0 chr2 41877350 41877760 -208810094 - MSTB LTR MaLR 0 426 2 457 179 0 0 chr2 41877840 41877918 -208809936 - AluJ/FLAM SINE Alu -234 78 1 342 209 100 33 chr2 41878011 41878221 -208809633 - L1M4 LINE L1 -3084 3062 2839 514 114 13 0 chr2 41878600 41878679 -208809175 - MADE1 DNA Mariner 0 80 1 1507 206 63 15 chr2 41880544 41880879 -208806975 - MLT1A1 LTR MaLR 0 365 15 2016 188 43 10 chr2 41880919 41881333 -208806521 - MSTA LTR MaLR 0 428 1 420 243 221 7 chr2 41881440 41881580 -208806274 + MIR SINE MIR 76 245 -17 1674 146 52 45 chr2 41882247 41882556 -208805298 - AluJb SINE Alu -1 311 1 1974 100 3 44 chr2 41883787 41884106 -208803748 - L1MA1 LINE L1 0 6302 5997 231 219 0 0 chr2 41886000 41886041 -208801813 + L2 LINE L2 3263 3303 -10 251 235 94 35 chr2 41886419 41886504 -208801350 + L2 LINE L2 3222 3311 -2 377 315 51 19 chr2 41887356 41887613 -208800241 + L1ME LINE L1 5479 5743 -378 25 0 0 0 chr2 41887631 41887656 -208800198 + AT_rich Low_complexity Low_complexity 1 25 0 1040 295 32 32 chr2 41887937 41888629 -208799225 + L1ME1 LINE L1 2646 3337 -2809 * 2210 241 119 27 chr2 41888628 41890166 -208797688 + L1ME1 LINE L1 4490 6159 -7 698 282 75 31 chr2 41890226 41890928 -208796926 + L1ME3A LINE L1 4733 5654 -516 318 339 48 43 chr2 41890930 41891116 -208796738 - MER63A DNA MER1_type -2 208 22 601 251 104 86 chr2 41891116 41891560 -208796294 + L1ME3A LINE L1 5668 6119 -2 674 253 18 0 chr2 41891591 41891761 -208796093 - L1ME3A LINE L1 -331 5839 5667 504 269 32 19 chr2 41891865 41892021 -208795833 + MIR SINE MIR 33 190 -72 204 203 34 0 chr2 41892897 41892956 -208794898 + T-rich Low_complexity Low_complexity 4 64 0 1705 193 65 3 chr2 41893038 41893422 -208794432 + L1MB4 LINE L1 5486 5893 -287 492 298 34 11 chr2 41893621 41893799 -208794055 + MIR SINE MIR 3 184 -78 242 194 16 0 chr2 41893801 41893863 -208793991 + (TA)n Simple_repeat Simple_repeat 2 64 0 532 327 42 12 chr2 41894179 41894530 -208793324 - L1ME LINE L1 -403 5767 5401 685 99 45 9 chr2 41895889 41896000 -208791854 - L1PA15 LINE L1 0 6165 6051 401 117 0 0 chr2 41896954 41897014 -208790840 - Alu SINE Alu 0 302 243 30 27 0 0 chr2 41897279 41897316 -208790538 + AT_rich Low_complexity Low_complexity 1 37 0 1209 217 74 19 chr2 41897955 41898278 -208789576 - MER2 DNA MER2_type 0 345 5 449 159 0 25 chr2 41898766 41898929 -208788925 + (TA)n Simple_repeat Simple_repeat 2 160 0 1891 155 3 0 chr2 41899148 41899444 -208788410 + AluSx SINE Alu 2 298 -14 313 304 76 8 chr2 41899858 41900046 -208787808 - L1ME3A LINE L1 -637 5541 5343 1553 202 3 10 chr2 41900124 41900426 -208787428 - AluJo SINE Alu -8 304 5 261 290 50 0 chr2 41900575 41900675 -208787179 - L1MEd LINE L1 -5041 1078 974 22 0 0 0 chr2 41900692 41900714 -208787140 + AT_rich Low_complexity Low_complexity 1 22 0 327 261 54 69 chr2 41900943 41901073 -208786781 - L1ME3A LINE L1 -1 6169 6042 1843 226 60 45 chr2 41903041 41903573 -208784281 + MLT1E2 LTR MaLR 63 602 -24 26 0 0 0 chr2 41905332 41905358 -208782496 + AT_rich Low_complexity Low_complexity 1 26 0 193 356 68 0 chr2 41906506 41906565 -208781289 - L2 LINE L2 -74 3198 3136 766 303 37 8 chr2 41907371 41907612 -208780242 + MIR SINE MIR 15 262 0 494 291 0 0 chr2 41907950 41908084 -208779770 + L2 LINE L2 1864 1997 -1317 216 328 89 62 chr2 41908114 41908483 -208779371 - L3 LINE CR1 -105 1472 1094 243 379 33 13 chr2 41909704 41909857 -208777997 + L3 LINE CR1 1421 1576 -1 943 299 163 55 chr2 41910082 41910450 -208777404 - L1M4 LINE L1 -1911 4235 3908 1455 219 28 14 chr2 41910450 41910733 -208777121 - AluJo SINE Alu -21 291 5 943 299 163 55 chr2 41910733 41911693 -208776161 - L1M4 LINE L1 -2238 3908 2763 2223 85 0 23 chr2 41911802 41912109 -208775745 + AluSg SINE Alu 1 300 -10 594 323 94 52 chr2 41914032 41914534 -208773320 + L2 LINE L2 1234 1756 -1558 343 344 51 28 chr2 41914981 41915196 -208772658 + L2 LINE L2 1753 1972 -1342 943 287 32 56 chr2 41915291 41915723 -208772131 + L2 LINE L2 1892 2313 -1001 405 313 8 15 chr2 41915700 41915831 -208772023 + L2 LINE L2 3182 3311 -2 * 393 75 0 0 chr2 41916065 41916118 -208771736 + (TG)n Simple_repeat Simple_repeat 2 54 0 21 36 0 0 chr2 41916652 41916680 -208771174 + AT_rich Low_complexity Low_complexity 1 28 0 38 81 0 0 chr2 41916721 41916808 -208771046 + AT_rich Low_complexity Low_complexity 1 87 0 4889 164 51 1 chr2 41917050 41918067 -208769787 + L1PA15 LINE L1 5103 6158 -7 1451 199 3 34 chr2 41918148 41918444 -208769410 + AluJo SINE Alu 5 291 -21 296 336 72 16 chr2 41918562 41918687 -208769167 + MIR3 SINE MIR 38 169 -39 24 85 0 0 chr2 41921840 41921899 -208765955 + AT_rich Low_complexity Low_complexity 1 59 0 400 270 40 20 chr2 41922811 41922959 -208764895 + HAL1 LINE L1 2 152 -2355 541 158 20 20 chr2 41922961 41923062 -208764792 + FRAM SINE Alu 66 166 -10 295 338 112 44 chr2 41923082 41923467 -208764387 + HAL1 LINE L1 186 596 -1911 1638 201 23 51 chr2 41923483 41923876 -208763978 + MLT1B LTR MaLR 9 390 0 219 384 151 0 chr2 41924357 41924503 -208763351 - MIR3 SINE MIR -1 207 40 1717 199 73 25 chr2 41924793 41925201 -208762653 + MSTA LTR MaLR 1 428 0 390 91 0 0 chr2 41925897 41925952 -208761902 + (TG)n Simple_repeat Simple_repeat 2 56 0 2032 157 6 0 chr2 41926041 41926397 -208761457 + L1PA16 LINE L1 5805 6162 -4 241 280 180 10 chr2 41926896 41926996 -208760858 + MIR SINE MIR 7 123 -139 1982 120 43 0 chr2 41927068 41927367 -208760487 + AluSx SINE Alu 1 312 0 541 303 43 97 chr2 41927429 41927872 -208759982 - L2 LINE L2 -592 2722 2304 23 0 0 0 chr2 41928039 41928062 -208759792 + AT_rich Low_complexity Low_complexity 1 23 0 336 299 35 33 chr2 41928410 41928608 -208759246 - MIR SINE MIR -27 235 43 245 188 0 31 chr2 41928841 41928905 -208758949 - LTR66 LTR ERVL -175 435 374 413 291 151 11 chr2 41928909 41929180 -208758674 - L2 LINE L2 -38 3275 2967 749 214 83 18 chr2 41929181 41929349 -208758505 - MER5A DNA MER1_type -8 181 3 796 313 138 3 chr2 41929459 41929785 -208758069 - L2 LINE L2 -502 2812 2443 22 0 0 0 chr2 41929851 41929873 -208757981 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 41930778 41930831 -208757023 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr2 41930966 41930988 -208756866 + AT_rich Low_complexity Low_complexity 1 22 0 229 340 133 0 chr2 41931718 41931868 -208755986 + MIR SINE MIR 74 243 -19 220 371 113 0 chr2 41932483 41932607 -208755247 + L2 LINE L2 3134 3271 -1 22 35 0 0 chr2 41933577 41933606 -208754248 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr2 41934244 41934284 -208753570 + AT_rich Low_complexity Low_complexity 1 40 0 387 41 0 0 chr2 41935612 41935661 -208752193 + (TG)n Simple_repeat Simple_repeat 1 49 0 395 78 16 0 chr2 41935663 41935727 -208752127 + (GA)n Simple_repeat Simple_repeat 2 66 0 41 0 0 0 chr2 41936703 41936744 -208751110 + AT_rich Low_complexity Low_complexity 1 41 0 193 372 70 12 chr2 41937330 41937416 -208750438 + L2 LINE L2 3139 3229 -43 22 0 0 0 chr2 41937983 41938005 -208749849 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 41938158 41938211 -208749643 + AT_rich Low_complexity Low_complexity 1 53 0 1863 79 254 211 chr2 41938491 41939051 -208748803 + LTR12 LTR ERV1 1 584 -130 15152 148 29 26 chr2 41939070 41942234 -208745620 + HERV30 LTR ERV1 42 3228 -5029 6374 96 2 8 chr2 41942241 41943121 -208744733 + HERV30 LTR ERV1 4080 4954 -3445 1338 145 23 43 chr2 41943114 41943562 -208744292 + HERV17 LTR ERV1 706 1219 -5677 * 904 90 0 0 chr2 41943559 41943693 -208744161 + HERV17 LTR ERV1 1592 1725 -5171 * 4526 108 3 0 chr2 41943683 41944324 -208743530 + HERV17 LTR ERV1 7757 8399 0 238 180 0 40 chr2 41944324 41944374 -208743480 + LTR30 LTR ERV1 1 48 -674 2036 71 227 178 chr2 41944374 41944880 -208742974 + LTR12 LTR ERV1 51 581 -133 696 337 40 31 chr2 41945184 41945703 -208742151 + L1M4 LINE L1 2964 3487 -2659 266 352 42 46 chr2 41945962 41946178 -208741676 - L1MEd LINE L1 -5566 553 339 711 265 39 20 chr2 41946224 41946428 -208741426 - MER63A DNA MER1_type 0 210 3 683 325 66 39 chr2 41946435 41946918 -208740936 - L1MEd LINE L1 -5619 500 5 5728 85 0 3 chr2 41947623 41948387 -208739467 - L1PA7 LINE L1 0 6154 5393 * 20590 102 8 2 chr2 41948383 41951440 -208736414 + L1PA7 LINE L1 2321 5396 -750 202 268 42 42 chr2 41952042 41952113 -208735741 + L2 LINE L2 2974 3044 -228 * 253 297 0 0 chr2 41952091 41952155 -208735699 - MER5A DNA MER1_type -114 75 12 1118 308 104 10 chr2 41952641 41953141 -208734713 - MLT1H LTR MaLR -2 547 1 23 33 0 0 chr2 41954798 41954828 -208733026 + AT_rich Low_complexity Low_complexity 1 30 0 2347 161 24 28 chr2 41955493 41955953 -208731901 - L1PB4 LINE L1 -3 6153 5696 535 318 53 0 chr2 41956030 41956200 -208731654 + MIR SINE MIR 78 256 -6 224 336 43 43 chr2 41956370 41956486 -208731368 - L2 LINE L2 -13 3259 3144 223 306 28 0 chr2 41957566 41957638 -208730216 - MER5B DNA MER1_type -7 171 98 1757 133 29 45 chr2 41957797 41958106 -208729748 + AluSq SINE Alu 10 313 0 212 224 104 80 chr2 41958271 41958396 -208729458 - L2 LINE L2 -36 3277 3150 13920 41 10 0 chr2 41958570 41961045 -208726809 + L1PA4 LINE L1 3666 6150 -5 192 313 50 30 chr2 41961263 41961362 -208726492 - MER5A DNA MER1_type -1 188 88 23 54 0 0 chr2 41961596 41961633 -208726221 + AT_rich Low_complexity Low_complexity 1 37 0 3202 81 9 9 chr2 41961957 41962399 -208725455 - L1PA7 LINE L1 -5 6149 5708 1411 192 3 54 chr2 41962491 41962788 -208725066 + AluJo SINE Alu 1 282 -30 468 113 0 12 chr2 41962792 41962872 -208724982 + L1PA13 LINE L1 6084 6162 -1 307 0 23 23 chr2 41963088 41963132 -208724722 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 411 68 0 0 chr2 41963131 41963190 -208724664 + (CA)n Simple_repeat Simple_repeat 1 59 0 937 190 92 35 chr2 41963810 41964125 -208723729 - MER33 DNA MER1_type -4 320 1 186 353 35 0 chr2 41964277 41964362 -208723492 - L2 LINE L2 0 3272 3185 337 304 90 17 chr2 41965035 41965324 -208722530 + L1ME4a LINE L1 5561 5870 -251 * 1605 261 102 33 chr2 41965323 41966259 -208721595 - L1ME3A LINE L1 0 6170 5174 2227 277 89 70 chr2 41966486 41967690 -208720164 - L2 LINE L2 -39 3274 2026 2021 152 0 7 chr2 41967690 41968000 -208719854 + AluSg SINE Alu 1 308 -2 2227 277 89 70 chr2 41968000 41968315 -208719539 - L2 LINE L2 -1287 2026 1719 1688 80 0 0 chr2 41969043 41969267 -208718587 + L1PB1 LINE L1 5928 6151 0 29 28 0 0 chr2 41969384 41969420 -208718434 + AT_rich Low_complexity Low_complexity 1 36 0 542 231 32 54 chr2 41970228 41970414 -208717440 - L2 LINE L2 -7 3306 3125 738 301 81 59 chr2 41971108 41971666 -208716188 - MLT1G LTR MaLR -1 589 20 581 338 65 21 chr2 41971664 41972004 -208715850 + MLT1I LTR MaLR 55 409 0 * 440 357 63 12 chr2 41972881 41973133 -208714721 - L3 LINE CR1 -1 1576 1312 271 298 1 37 chr2 41973269 41973394 -208714460 - L1ME3A LINE L1 -75 6087 5968 728 283 154 17 chr2 41973494 41973903 -208713951 - L1ME3A LINE L1 -214 5948 5483 25 0 0 0 chr2 41973927 41973952 -208713902 + AT_rich Low_complexity Low_complexity 1 25 0 6401 81 14 1 chr2 41974012 41975399 -208712455 - L1PA7 LINE L1 -15 6139 4740 16782 132 139 98 chr2 41975403 41976483 -208711371 - L1PA7 LINE L1 -1769 4377 3343 2235 81 0 11 chr2 41976483 41976798 -208711056 - AluY SINE Alu 0 312 1 16782 132 139 98 chr2 41976798 41979907 -208707947 - L1PA7 LINE L1 -2803 3343 12 33 56 0 0 chr2 41980011 41980065 -208707789 + AT_rich Low_complexity Low_complexity 1 54 0 312 305 25 8 chr2 41980204 41980322 -208707532 - L3 LINE CR1 -498 1079 960 783 94 0 0 chr2 41981409 41981515 -208706339 - L1PA2 LINE L1 -57 6098 5993 218 54 0 27 chr2 41981531 41981568 -208706286 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 2006 306 28 38 chr2 41982030 41983112 -208704742 - L2 LINE L2 0 3313 2237 1691 246 62 55 chr2 41983454 41984004 -208703850 + MLT2B3 LTR ERVL 1 554 0 277 384 40 8 chr2 41984836 41984961 -208702893 + MIR3 SINE MIR 57 185 -23 1522 187 72 47 chr2 41984962 41985498 -208702356 + MER67C LTR ERV1 1 514 0 789 294 76 54 chr2 41986269 41987247 -208700607 + HAL1 LINE L1 769 1799 -708 355 248 100 43 chr2 41987304 41987534 -208700320 + HAL1b LINE L1 691 933 -415 832 153 25 0 chr2 41987801 41987964 -208699890 + GA-rich Low_complexity Low_complexity 2 168 0 559 363 53 44 chr2 41988560 41989382 -208698472 - MERVL LTR ERVL -1219 4266 3437 260 255 31 20 chr2 41989739 41989837 -208698017 + (TTTA)n Simple_repeat Simple_repeat 4 102 0 1969 147 40 6 chr2 41990680 41991006 -208696848 + MER1B DNA MER1_type 1 337 0 181 285 300 8 chr2 41992941 41993071 -208694783 + MER5A DNA MER1_type 6 173 -16 26 30 0 0 chr2 41993273 41993306 -208694548 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr2 41993793 41993818 -208694036 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr2 41994280 41994327 -208693527 + AT_rich Low_complexity Low_complexity 1 47 0 244 263 23 23 chr2 41994564 41994739 -208693115 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 259 230 46 35 chr2 41994629 41994803 -208693051 + (TTATA)n Simple_repeat Simple_repeat 2 177 0 195 186 14 29 chr2 41995159 41995229 -208692625 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 389 332 68 24 chr2 41995443 41995648 -208692206 - L1ME3A LINE L1 -213 6026 5813 494 304 91 38 chr2 41995763 41996214 -208691640 - L1ME3A LINE L1 -2196 4019 3545 1689 187 40 75 chr2 41996329 41996757 -208691097 - MLT2C2 LTR ERVL -48 416 4 2212 75 4 0 chr2 41996757 41997038 -208690816 + AluY SINE Alu 27 308 -3 331 231 110 35 chr2 41997161 41997451 -208690403 - L1ME3A LINE L1 -2913 3302 2991 198 150 25 0 chr2 41997670 41997710 -208690144 - L2 LINE L2 -5 3308 3268 222 143 0 0 chr2 41997830 41997879 -208689975 + (TG)n Simple_repeat Simple_repeat 2 50 0 335 248 0 30 chr2 41998251 41998273 -208689581 - L1MA10 LINE L1 -66 6268 6247 905 238 54 66 chr2 41998273 41998577 -208689277 - L1ME1 LINE L1 -79 6087 5788 1051 194 138 67 chr2 41998577 41998918 -208688936 + MLT1A1 LTR MaLR 1 365 0 905 238 54 66 chr2 41998918 41999037 -208688817 - L1ME1 LINE L1 -378 5788 5669 451 240 120 17 chr2 41999174 41999349 -208688505 - L1ME3A LINE L1 -5534 862 670 796 277 97 26 chr2 41999361 41999671 -208688183 - L1ME3A LINE L1 -5822 574 243 304 311 44 0 chr2 41999672 41999762 -208688092 - L1ME3A LINE L1 -6211 185 92 26 0 0 0 chr2 42000385 42000411 -208687443 + AT_rich Low_complexity Low_complexity 1 26 0 791 235 36 5 chr2 42000838 42001034 -208686820 - MER3 DNA MER1_type 0 209 8 657 146 81 65 chr2 42001953 42002138 -208685716 - MER53 DNA DNA 0 189 2 1730 215 11 6 chr2 42002380 42002743 -208685111 + MLT1A1 LTR MaLR 1 365 0 592 326 16 52 chr2 42004238 42004603 -208683251 - MLT1J LTR MaLR 0 511 160 572 206 108 77 chr2 42004854 42004936 -208682918 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42004936 42005370 -208682484 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42005370 42005481 -208682373 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42005527 42005551 -208682303 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42005644 42005708 -208682146 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42008160 42008337 -208679517 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42008546 42008606 -208679248 + (TA)n Simple_repeat Simple_repeat 2 60 0 266 164 0 16 chr2 42008846 42008907 -208678947 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42008912 42009160 -208678694 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42010508 42010715 -208677139 - L1MEc LINE L1 -4868 1528 1313 396 103 0 0 chr2 42010855 42010913 -208676941 + (TA)n Simple_repeat Simple_repeat 1 58 0 1037 233 97 50 chr2 42011193 42011597 -208676257 + MLT1C LTR MaLR 45 467 0 387 269 108 93 chr2 42011640 42011919 -208675935 - L1MEc LINE L1 -5397 808 526 496 300 0 0 chr2 42012342 42012482 -208675372 + L1MD2 LINE L1 6202 6341 -18 21 36 0 0 chr2 42012484 42012512 -208675342 + AT_rich Low_complexity Low_complexity 1 28 0 1494 140 34 82 chr2 42012661 42013157 -208674697 + MER51A LTR ERV1 2 634 0 422 315 106 0 chr2 42013189 42013424 -208674430 - MLT1J LTR MaLR -249 262 3 866 106 0 0 chr2 42014806 42014919 -208672935 + AluSq/x SINE Alu 3 115 -198 617 72 0 21 chr2 42014920 42015017 -208672837 + AluY SINE Alu 215 309 -2 1412 115 0 0 chr2 42015017 42015217 -208672637 + AluSx SINE Alu 104 303 -9 22 0 0 0 chr2 42016159 42016181 -208671673 + AT_rich Low_complexity Low_complexity 1 22 0 440 184 35 71 chr2 42017422 42017507 -208670347 + L1MC4 LINE L1 7902 7982 -60 2770 16 0 9 chr2 42017507 42017828 -208670026 - AluYb8 SINE Alu 0 318 1 440 184 35 71 chr2 42017828 42017883 -208669971 + L1MC4 LINE L1 7982 8037 -5 274 339 69 39 chr2 42017946 42018076 -208669778 - MIR3 SINE MIR -72 136 3 263 321 75 0 chr2 42018106 42018240 -208669614 - MIR SINE MIR -109 153 10 435 282 44 103 chr2 42019387 42019795 -208668059 - MLT1J LTR MaLR -32 479 96 719 306 73 53 chr2 42020500 42020898 -208666956 + L2 LINE L2 2907 3312 -1 21 57 0 0 chr2 42021991 42022026 -208665828 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr2 42022685 42022708 -208665146 + (T)n Simple_repeat Simple_repeat 1 23 0 797 82 16 55 chr2 42022898 42023081 -208664773 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 376 152 0 33 chr2 42023090 42023182 -208664672 + CT-rich Low_complexity Low_complexity 3 91 0 1240 185 100 4 chr2 42023182 42023431 -208664423 - AluSx SINE Alu -39 273 1 329 266 76 21 chr2 42023502 42023791 -208664063 - L1ME4a LINE L1 -3 6118 5766 1791 96 16 4 chr2 42024661 42024911 -208662943 + L1PA7 LINE L1 5887 6139 -15 218 254 183 0 chr2 42026333 42026404 -208661450 + L2 LINE L2 3178 3261 -11 213 65 0 0 chr2 42026435 42026466 -208661388 + (CA)n Simple_repeat Simple_repeat 1 31 0 656 225 147 28 chr2 42027651 42027971 -208659883 - L1ME4a LINE L1 -832 5314 4957 400 291 48 39 chr2 42027976 42028239 -208659615 - L1ME4a LINE L1 -1894 4252 3975 1711 160 103 3 chr2 42030094 42030425 -208657429 - THE1B LTR MaLR 0 364 1 288 53 0 0 chr2 42030526 42030564 -208657290 + (TG)n Simple_repeat Simple_repeat 2 39 0 2621 116 62 10 chr2 42032507 42032911 -208654943 + MER83 LTR ERV1 1 425 -23 569 258 122 18 chr2 42035161 42035382 -208652472 - MER112 DNA MER1_type -13 247 4 192 229 29 43 chr2 42035412 42035482 -208652372 - L2 LINE L2 -939 2375 2307 3634 177 81 25 chr2 42035591 42036992 -208650862 - L1MA7 LINE L1 0 6291 4686 662 301 61 9 chr2 42037657 42037870 -208649984 - MIR SINE MIR -26 236 13 467 120 0 13 chr2 42037951 42038026 -208649828 - MADE1 DNA Mariner -5 75 2 2240 104 48 22 chr2 42038168 42038523 -208649331 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr2 42038673 42038694 -208649160 + AT_rich Low_complexity Low_complexity 1 21 0 190 286 0 0 chr2 42038812 42038854 -208649000 + MIR SINE MIR 119 160 -102 425 315 150 9 chr2 42040340 42040553 -208647301 + MIR SINE MIR 6 248 -14 27 73 0 0 chr2 42040927 42040982 -208646872 + AT_rich Low_complexity Low_complexity 1 55 0 205 291 82 73 chr2 42041064 42041174 -208646680 + MIR SINE MIR 34 144 -118 273 286 14 0 chr2 42041242 42041312 -208646542 - L2 LINE L2 -4 3268 3198 2159 282 67 39 chr2 42041497 42042925 -208644929 + L1M4c LINE L1 1060 2542 -3840 8022 155 48 46 chr2 42042943 42044553 -208643301 - Tigger1 DNA MER2_type -804 1614 2 414 0 0 0 chr2 42044582 42044628 -208643226 + (CA)n Simple_repeat Simple_repeat 2 47 0 1838 202 24 30 chr2 42044629 42045094 -208642760 + L1MA6 LINE L1 5832 6293 -7 2174 225 77 25 chr2 42045104 42045939 -208641915 + L1M4c LINE L1 3008 3885 -2497 579 179 66 46 chr2 42045932 42046083 -208641771 + L1M4c LINE L1 4260 4413 -1969 * 3840 194 34 17 chr2 42046080 42046880 -208640974 + L1MA9 LINE L1 5353 6170 -142 351 44 0 0 chr2 42046880 42046925 -208640929 + (CA)n Simple_repeat Simple_repeat 1 45 0 3840 194 34 17 chr2 42046925 42046969 -208640885 + L1MA9 LINE L1 6170 6212 -100 32 43 0 0 chr2 42046983 42047029 -208640825 + AT_rich Low_complexity Low_complexity 1 46 0 11385 31 1 0 chr2 42047486 42049625 -208638229 + L1PA3 LINE L1 4028 6169 0 203 0 0 36 chr2 42051085 42051113 -208636741 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1156 179 91 33 chr2 42052122 42052396 -208635458 - AluJo SINE Alu -11 301 12 703 168 25 117 chr2 42052510 42052707 -208635147 + MLT1D LTR MaLR 1 179 -326 734 237 118 0 chr2 42052740 42052926 -208634928 + MLT1D LTR MaLR 298 505 0 272 257 7 50 chr2 42053631 42053771 -208634083 + L1ME4a LINE L1 5765 5898 -223 1621 176 95 15 chr2 42053788 42054255 -208633599 - Charlie1b DNA MER1_type -6 517 4 338 268 67 61 chr2 42054429 42054593 -208633261 - MIR SINE MIR -4 258 94 244 274 0 0 chr2 42054711 42054773 -208633081 + (TG)n Simple_repeat Simple_repeat 2 63 0 213 132 0 0 chr2 42055374 42055412 -208632442 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 57 0 0 chr2 42055752 42055787 -208632067 + AT_rich Low_complexity Low_complexity 1 35 0 2330 60 0 0 chr2 42056140 42056493 -208631361 + AluY SINE Alu 1 353 0 1898 114 12 2 chr2 42057179 42057491 -208630363 + L1P LINE L1 4948 5260 -886 1275 262 68 46 chr2 42058069 42058523 -208629331 - MLT2B1 LTR ERVL -56 464 1 182 309 29 0 chr2 42060144 42060212 -208627642 + L3 LINE CR1 739 808 -769 209 428 12 6 chr2 42061827 42061993 -208625861 + L3 LINE CR1 946 1112 -465 322 71 0 36 chr2 42062120 42062176 -208625678 + (TA)n Simple_repeat Simple_repeat 2 55 0 183 42 0 0 chr2 42062491 42062515 -208625339 + (TG)n Simple_repeat Simple_repeat 1 24 0 397 0 19 19 chr2 42063870 42063924 -208623930 + (CA)n Simple_repeat Simple_repeat 1 54 0 212 273 20 10 chr2 42064208 42064307 -208623547 + G-rich Low_complexity Low_complexity 5 104 0 * 249 245 29 20 chr2 42064292 42064394 -208623460 + (CCCG)n Simple_repeat Simple_repeat 3 105 0 21 36 0 0 chr2 42064394 42064422 -208623432 + GC_rich Low_complexity Low_complexity 1 28 0 758 225 0 22 chr2 42065660 42065842 -208622012 + MER5B DNA MER1_type 1 178 0 185 322 144 0 chr2 42065896 42065986 -208621868 - MER5A DNA MER1_type -77 112 10 226 214 0 0 chr2 42066599 42066655 -208621199 + LTR38 LTR ERV1 20 75 -481 2654 45 0 3 chr2 42068173 42068482 -208619372 + AluY SINE Alu 1 308 -3 658 271 96 25 chr2 42068633 42068873 -208618981 + MIR SINE MIR 6 262 0 186 247 21 118 chr2 42069968 42070061 -208617793 - MIR SINE MIR -73 189 106 518 301 0 35 chr2 42070066 42070239 -208617615 - MER5B DNA MER1_type -11 167 1 186 252 0 0 chr2 42070239 42070276 -208617578 - MIR SINE MIR -111 97 60 682 277 47 35 chr2 42071161 42071417 -208616437 - L2 LINE L2 -4 3309 3051 2104 100 30 13 chr2 42072712 42073011 -208614843 - AluSx SINE Alu -8 304 1 603 236 93 12 chr2 42073402 42073563 -208614291 - MER97a DNA MER1_type? -715 179 6 2295 118 0 0 chr2 42074140 42074445 -208613409 - AluSx SINE Alu -7 305 1 29 101 0 0 chr2 42074457 42074556 -208613298 + AT_rich Low_complexity Low_complexity 1 99 0 1657 180 7 0 chr2 42074665 42074943 -208612911 + AluJo SINE Alu 1 280 -32 263 0 81 0 chr2 42074943 42074980 -208612874 + A-rich Low_complexity Low_complexity 1 40 0 186 345 179 20 chr2 42075075 42075478 -208612376 - L2 LINE L2 0 3313 2847 561 30 0 0 chr2 42075960 42076027 -208611827 + (CA)n Simple_repeat Simple_repeat 2 68 0 2022 136 0 0 chr2 42076053 42076333 -208611521 - AluSx SINE Alu -32 280 1 277 125 25 0 chr2 42076358 42076398 -208611456 - MER57A LTR ERV1 -68 335 295 1857 253 137 9 chr2 42077221 42077850 -208610004 + MER20B DNA MER1_type 6 714 -69 1462 195 55 65 chr2 42077882 42078282 -208609572 + MSTD LTR MaLR 1 396 0 218 269 167 0 chr2 42078644 42078722 -208609132 + MIR SINE MIR 57 147 -61 352 325 8 26 chr2 42080080 42080197 -208607657 + MIR3 SINE MIR 84 198 -10 402 289 21 7 chr2 42080782 42080924 -208606930 - L1MC5 LINE L1 -51 7910 7767 701 199 0 34 chr2 42080933 42081079 -208606775 + FLAM_A SINE Alu 1 141 -1 419 244 59 118 chr2 42081085 42081331 -208606523 - L1MC5 LINE L1 -189 7772 7513 1544 174 191 6 chr2 42081331 42081692 -208606162 + MSTA LTR MaLR 1 428 0 419 244 59 118 chr2 42081692 42082192 -208605662 - L1MC5 LINE L1 -448 7513 7070 400 268 86 75 chr2 42082386 42082930 -208604924 + L1ME4a LINE L1 5544 6093 -28 29 28 0 0 chr2 42082930 42082966 -208604888 + AT_rich Low_complexity Low_complexity 1 36 0 210 250 250 54 chr2 42083300 42083448 -208604406 - MIR SINE MIR -73 189 13 589 233 8 31 chr2 42084677 42084806 -208603048 - FLAM_C SINE Alu -7 126 1 318 310 40 0 chr2 42084806 42084906 -208602948 - L2 LINE L2 -14 3299 3196 283 357 202 6 chr2 42085264 42085432 -208602422 + L3 LINE CR1 1119 1319 -258 464 301 99 34 chr2 42085467 42085759 -208602095 + L2 LINE L2 3003 3313 0 219 368 103 0 chr2 42085911 42086047 -208601807 - L3 LINE CR1 -111 1466 1317 434 287 23 0 chr2 42086762 42086891 -208600963 - MIR SINE MIR -31 231 100 688 174 47 61 chr2 42087219 42087261 -208600593 - Charlie1 DNA MER1_type 0 2761 2720 2385 56 0 0 chr2 42087261 42087571 -208600283 - AluY SINE Alu 0 310 1 688 174 47 61 chr2 42087571 42087739 -208600115 - Charlie1 DNA MER1_type -41 2720 2553 294 163 43 22 chr2 42087742 42087834 -208600020 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 497 316 90 35 chr2 42088540 42088982 -208598872 - L2 LINE L2 -123 3190 2722 193 308 0 0 chr2 42089488 42089540 -208598314 + MIR SINE MIR 93 144 -64 226 181 14 14 chr2 42089837 42089909 -208597945 + (TG)n Simple_repeat Simple_repeat 2 73 0 2437 79 0 0 chr2 42090905 42091210 -208596644 - AluSq SINE Alu -8 305 1 1591 211 37 8 chr2 42092386 42092741 -208595113 + MLT1A1 LTR MaLR 1 365 0 183 167 0 0 chr2 42093244 42093286 -208594568 + (TG)n Simple_repeat Simple_repeat 1 42 0 440 322 58 40 chr2 42093466 42093640 -208594214 + MIR SINE MIR 8 184 -78 305 336 43 9 chr2 42094089 42094205 -208593649 - MER5A DNA MER1_type -9 180 61 491 182 0 0 chr2 42094217 42094305 -208593549 - L1MB1 LINE L1 -1 6167 6080 289 203 31 0 chr2 42094459 42094523 -208593331 - MER69 DNA AcHobo 0 2526 2461 532 231 25 0 chr2 42094529 42094650 -208593204 - MER69 DNA AcHobo -2377 149 26 692 207 15 7 chr2 42094690 42094825 -208593029 - MIR SINE MIR -107 155 20 2350 48 0 45 chr2 42094928 42095242 -208592612 - AluY SINE Alu -11 300 1 32 95 0 0 chr2 42095347 42095442 -208592412 + AT_rich Low_complexity Low_complexity 1 95 0 1242 245 141 43 chr2 42095681 42096142 -208591712 + MLT1J LTR MaLR 6 511 0 237 291 94 31 chr2 42096214 42096341 -208591513 - MARNA DNA Mariner -17 569 435 2278 105 55 19 chr2 42098084 42098446 -208589408 + THE1C LTR MaLR 1 375 0 1357 31 0 0 chr2 42098861 42099023 -208588831 - L1PA5 LINE L1 0 6154 5993 1158 86 0 0 chr2 42099023 42099175 -208588679 + L1PA5 LINE L1 5836 5987 -167 210 143 0 0 chr2 42100591 42100626 -208587228 + (TG)n Simple_repeat Simple_repeat 2 36 0 422 310 49 40 chr2 42101160 42101386 -208586468 - MIR SINE MIR -1 261 34 205 200 40 40 chr2 42103236 42103286 -208584568 - L3 LINE CR1 -13 1564 1515 5517 28 8 0 chr2 42103306 42103959 -208583895 - L1PA3 LINE L1 -1677 4469 3812 * 7676 32 1 0 chr2 42103956 42105660 -208582194 + L1PA3 LINE L1 4464 6167 0 1167 119 0 0 chr2 42105789 42105949 -208581905 - AluSg/x SINE Alu -8 304 145 272 137 20 0 chr2 42106029 42106080 -208581774 + CT-rich Low_complexity Low_complexity 3 54 0 210 37 0 0 chr2 42106254 42106281 -208581573 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1838 28 0 0 chr2 42106501 42106719 -208581135 - L1P1 LINE L1 -360 5795 5578 514 48 0 0 chr2 42106719 42106779 -208581075 + L1PA5 LINE L1 6077 6139 -15 396 0 0 0 chr2 42106779 42106823 -208581031 + (TA)n Simple_repeat Simple_repeat 2 45 0 244 271 39 70 chr2 42107005 42107134 -208580720 - MIR SINE MIR -34 228 104 240 340 85 14 chr2 42107809 42107950 -208579904 - MIR3 SINE MIR -41 167 17 225 130 22 22 chr2 42108087 42108133 -208579721 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 2557 7 0 0 chr2 42108934 42109223 -208578631 + L1PA2 LINE L1 5864 6152 -3 351 331 47 16 chr2 42109432 42109559 -208578295 - L2 LINE L2 -8 3305 3175 402 344 125 47 chr2 42109719 42110374 -208577480 - L2 LINE L2 -337 2977 2272 546 319 171 36 chr2 42110504 42111031 -208576823 + L3 LINE CR1 256 853 -724 200 356 94 59 chr2 42111102 42111304 -208576550 + L3 LINE CR1 1116 1324 -253 894 233 85 5 chr2 42111361 42111584 -208576270 + MIR SINE MIR 1 241 -21 261 219 0 0 chr2 42112197 42112261 -208575593 + L1MA9 LINE L1 6226 6289 -23 198 0 0 0 chr2 42112268 42112290 -208575564 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 278 238 30 30 chr2 42112478 42112579 -208575275 - MER103 DNA DNA -3 163 63 408 300 0 0 chr2 42112772 42112902 -208574952 - MER94 DNA DNA 0 134 5 261 0 0 0 chr2 42112934 42112963 -208574891 + (T)n Simple_repeat Simple_repeat 1 29 0 578 316 132 9 chr2 42112965 42113385 -208574469 + L2 LINE L2 2650 3120 -193 285 305 95 11 chr2 42114535 42114630 -208573224 + L2 LINE L2 3168 3270 -2 222 263 138 0 chr2 42114628 42114708 -208573146 - MIR SINE MIR 0 262 172 * 675 251 65 11 chr2 42115065 42115284 -208572570 + L1ME3A LINE L1 5928 6164 -6 6532 155 8 6 chr2 42115562 42117262 -208570592 + L1MA1 LINE L1 4106 5809 -493 2409 86 37 0 chr2 42117272 42117622 -208570232 + L1MA1 LINE L1 5933 6295 -7 23 54 0 0 chr2 42117623 42117660 -208570194 + AT_rich Low_complexity Low_complexity 1 37 0 263 230 16 111 chr2 42118144 42118270 -208569584 + MER103 DNA DNA 51 164 -2 730 261 64 5 chr2 42119773 42119961 -208567893 + MIR SINE MIR 53 251 -11 259 326 67 11 chr2 42119972 42120061 -208567793 - MIR SINE MIR -155 107 14 423 274 163 20 chr2 42120972 42121125 -208566729 - MER5B DNA MER1_type -1 177 3 234 0 0 0 chr2 42121576 42121602 -208566252 + (T)n Simple_repeat Simple_repeat 1 26 0 2053 86 0 57 chr2 42121950 42122264 -208565590 - AluSc SINE Alu -13 296 1 23 0 0 0 chr2 42122273 42122296 -208565558 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 42124819 42124839 -208563015 + (T)n Simple_repeat Simple_repeat 1 20 0 224 222 0 0 chr2 42125039 42125084 -208562770 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 22 0 0 0 chr2 42125301 42125323 -208562531 + AT_rich Low_complexity Low_complexity 1 22 0 331 274 98 0 chr2 42125736 42125889 -208561965 + L1MC5 LINE L1 7759 7926 -35 380 317 57 63 chr2 42126306 42126640 -208561214 + MLT1L LTR MaLR 211 542 -73 220 355 13 0 chr2 42126673 42126749 -208561105 + MIR SINE MIR 26 102 -160 229 139 0 0 chr2 42127211 42127247 -208560607 - tRNA-Gly-GGA tRNA tRNA -39 36 1 345 339 40 24 chr2 42127709 42127833 -208560021 + L2 LINE L2 3147 3272 0 7393 208 29 43 chr2 42128542 42131251 -208556603 - L1MB8 LINE L1 -289 5889 3226 638 243 44 106 chr2 42131276 42131943 -208555911 - L1M4 LINE L1 -3736 3221 2610 1149 248 86 10 chr2 42131984 42132762 -208555092 - L1M4 LINE L1 -4442 2696 1603 2002 311 72 27 chr2 42132770 42133663 -208554191 - L1M4 LINE L1 -5916 943 11 209 343 30 0 chr2 42133906 42133973 -208553881 - MIR SINE MIR -68 140 72 1585 196 6 13 chr2 42134478 42134844 -208553010 + L1PB4 LINE L1 5847 6210 0 2117 209 107 5 chr2 42135098 42135878 -208551976 - L1MC/D LINE L1 -427 6209 5360 673 289 15 8 chr2 42135880 42136140 -208551714 - L1MC/D LINE L1 -2488 4052 3791 8628 228 73 32 chr2 42136147 42138997 -208548857 - L1MDa LINE L1 -3519 3021 16 2092 97 0 62 chr2 42139260 42139569 -208548285 + AluSg SINE Alu 1 290 -20 720 212 0 0 chr2 42139650 42139782 -208548072 + FLAM_A SINE Alu 1 132 -1 44 46 0 0 chr2 42139943 42140008 -208547846 + AT_rich Low_complexity Low_complexity 1 65 0 261 325 103 57 chr2 42140315 42140752 -208547102 + L2 LINE L2 2155 2611 -703 3268 74 2 2 chr2 42141008 42141512 -208546342 - L1PA7 LINE L1 -468 5686 5183 3280 73 0 13 chr2 42141512 42141943 -208545911 + L1PA7 LINE L1 5710 6153 -1 236 250 0 0 chr2 42142339 42142387 -208545467 + GA-rich Low_complexity Low_complexity 4 51 0 286 250 210 20 chr2 42142395 42142495 -208545359 + MER5B DNA MER1_type 60 178 0 229 216 0 0 chr2 42143654 42143705 -208544149 - L1M4 LINE L1 -917 5229 5179 440 327 122 42 chr2 42143782 42144118 -208543736 - L2 LINE L2 -528 2786 2424 231 36 0 0 chr2 42144118 42144146 -208543708 + (CAATA)n Simple_repeat Simple_repeat 2 29 0 1668 115 0 8 chr2 42144178 42144413 -208543441 - AluSg SINE Alu -75 235 3 23 0 0 0 chr2 42144424 42144447 -208543407 + AT_rich Low_complexity Low_complexity 1 23 0 197 295 66 57 chr2 42144641 42144763 -208543091 - L2 LINE L2 -309 2963 2841 910 169 82 68 chr2 42149758 42149965 -208537889 - AluJb SINE Alu -16 296 87 260 272 26 92 chr2 42150326 42150462 -208537392 - MIR SINE MIR -75 133 50 23 0 0 0 chr2 42150906 42150929 -208536925 + AT_rich Low_complexity Low_complexity 1 23 0 1586 164 7 41 chr2 42150979 42151135 -208536719 - AluJo SINE Alu -30 282 139 2281 79 0 30 chr2 42151135 42151440 -208536414 - AluY SINE Alu -15 296 1 1586 164 7 41 chr2 42151440 42151575 -208536279 - AluJo SINE Alu -173 139 1 225 0 0 0 chr2 42152005 42152030 -208535824 + (A)n Simple_repeat Simple_repeat 1 25 0 303 28 0 0 chr2 42152890 42152926 -208534928 + (TA)n Simple_repeat Simple_repeat 1 36 0 232 356 60 28 chr2 42153068 42153352 -208534502 + L2 LINE L2 2591 2883 -431 265 289 52 21 chr2 42153371 42153468 -208534386 + MER103 DNA DNA 66 165 -1 1387 142 78 0 chr2 42153586 42153818 -208534036 - AluSx SINE Alu -1 311 62 1525 152 3 95 chr2 42153927 42154263 -208533591 + AluJo SINE Alu 1 305 -7 2037 136 7 3 chr2 42154270 42154579 -208533275 + AluSg SINE Alu 1 310 0 1749 170 0 29 chr2 42154688 42155000 -208532854 - AluSx SINE Alu -9 303 1 284 354 102 81 chr2 42155246 42155568 -208532286 + L2 LINE L2 2925 3253 -19 234 305 8 85 chr2 42156007 42156125 -208531729 + MIR SINE MIR 16 124 -84 3031 161 47 69 chr2 42156345 42157052 -208530802 - LTR8 LTR ERV1 0 691 1 816 316 57 38 chr2 42157476 42157929 -208529925 + LTR33 LTR ERVL 10 471 -50 2180 97 7 0 chr2 42158215 42158504 -208529350 + AluSp SINE Alu 4 294 -19 384 22 0 0 chr2 42158512 42158557 -208529297 + (CA)n Simple_repeat Simple_repeat 2 46 0 409 370 63 55 chr2 42158715 42159454 -208528400 + L2 LINE L2 2533 3268 -4 192 322 151 33 chr2 42159784 42159936 -208527918 - MER5A DNA MER1_type -1 188 19 2340 78 0 0 chr2 42160167 42160460 -208527394 + AluY SINE Alu 1 293 -18 232 210 40 40 chr2 42160617 42160717 -208527137 + L1MC4 LINE L1 6607 6706 -1336 440 263 95 28 chr2 42161245 42161424 -208526430 + MIR3 SINE MIR 18 208 0 180 0 0 0 chr2 42161891 42161911 -208525943 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 22 0 0 0 chr2 42161975 42161997 -208525857 + AT_rich Low_complexity Low_complexity 1 22 0 193 150 10 40 chr2 42162106 42162206 -208525648 + (TA)n Simple_repeat Simple_repeat 1 97 0 254 291 0 0 chr2 42163308 42163363 -208524491 - MIR SINE MIR -129 133 79 405 325 39 26 chr2 42164068 42164222 -208523632 + MER5B DNA MER1_type 23 178 0 366 23 0 0 chr2 42164598 42164641 -208523213 + (TG)n Simple_repeat Simple_repeat 2 44 0 234 271 0 43 chr2 42166702 42166772 -208521082 - MIR SINE MIR -87 175 109 347 252 134 17 chr2 42166834 42166953 -208520901 - MER5B DNA MER1_type -43 135 3 345 250 102 31 chr2 42167708 42167836 -208520018 + MIR3 SINE MIR 20 156 -52 282 73 0 0 chr2 42169862 42169903 -208517951 + (CA)n Simple_repeat Simple_repeat 2 42 0 34 65 0 0 chr2 42170901 42170963 -208516891 + AT_rich Low_complexity Low_complexity 1 62 0 309 349 101 0 chr2 42171415 42171544 -208516310 + L2 LINE L2 3124 3265 -7 807 284 53 53 chr2 42171979 42172547 -208515307 + L1MC5 LINE L1 7347 7914 -47 21 0 0 0 chr2 42173317 42173338 -208514516 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 42174081 42174103 -208513751 + AT_rich Low_complexity Low_complexity 1 22 0 1127 60 0 13 chr2 42175845 42175996 -208511858 - L1PA5 LINE L1 0 6154 6006 1111 30 0 0 chr2 42175998 42176131 -208511723 + L1PA5 LINE L1 5840 5972 -182 201 386 35 58 chr2 42176321 42176492 -208511362 - L2 LINE L2 -89 3183 3017 1283 177 87 7 chr2 42176686 42176986 -208510868 - MER33 DNA MER1_type 0 324 1 21 0 0 0 chr2 42177551 42177572 -208510282 + AT_rich Low_complexity Low_complexity 1 21 0 2812 6 0 0 chr2 42178909 42179220 -208508634 + AluYa5 SINE Alu 1 311 0 23 54 0 0 chr2 42179489 42179526 -208508328 + AT_rich Low_complexity Low_complexity 1 37 0 1649 234 85 13 chr2 42179668 42180265 -208507589 - MER114 LTR ERV -8 640 1 26 64 0 0 chr2 42180302 42180349 -208507505 + AT_rich Low_complexity Low_complexity 1 47 0 2170 94 23 29 chr2 42180527 42180834 -208507020 + AluSg SINE Alu 2 306 -4 439 184 56 72 chr2 42181036 42181161 -208506693 + MIR SINE MIR 69 191 -71 2273 99 0 3 chr2 42182169 42182471 -208505383 + AluSc SINE Alu 1 301 -8 21 57 0 0 chr2 42182557 42182592 -208505262 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr2 42182953 42183000 -208504854 + AT_rich Low_complexity Low_complexity 1 47 0 398 179 26 13 chr2 42183230 42183308 -208504546 - MER2 DNA MER2_type -266 79 1 317 289 41 0 chr2 42183321 42183442 -208504412 + L1ME3A LINE L1 5852 5977 -193 627 306 44 23 chr2 42183568 42183653 -208504201 - L1ME4a LINE L1 -239 5882 5800 13839 140 38 6 chr2 42183653 42185994 -208501860 + Tigger1 DNA MER2_type 2 2418 0 627 306 44 23 chr2 42185994 42186297 -208501557 - L1ME4a LINE L1 -321 5800 5486 465 283 29 29 chr2 42186603 42186776 -208501078 - L1ME4a LINE L1 -1946 4200 4028 1485 255 25 22 chr2 42186778 42187143 -208500711 + MLT1A2 LTR MaLR 1 366 -8 905 284 72 29 chr2 42187209 42187794 -208500060 - L1ME4a LINE L1 -2197 3949 3340 25 0 0 0 chr2 42187824 42187849 -208500005 + AT_rich Low_complexity Low_complexity 1 25 0 672 336 84 35 chr2 42188926 42189378 -208498476 + MLT1K LTR MaLR 2 475 -113 314 225 160 80 chr2 42189435 42189635 -208498219 + L1M4 LINE L1 4598 4813 -1333 460 289 57 86 chr2 42189761 42190041 -208497813 - LTR33 LTR ERVL -211 310 39 2879 192 49 9 chr2 42191505 42192135 -208495719 - L1MB7 LINE L1 -69 6115 5461 307 347 35 14 chr2 42192409 42192553 -208495301 + MIR SINE MIR 47 193 -69 1548 225 45 74 chr2 42192556 42192992 -208494862 - MLT1D LTR MaLR -4 501 81 1938 121 73 48 chr2 42192992 42193347 -208494507 - THE1B LTR MaLR 0 364 1 1548 225 45 74 chr2 42193347 42193426 -208494428 - MLT1D LTR MaLR -424 81 1 240 228 35 0 chr2 42195751 42195808 -208492046 - L1MC4 LINE L1 -142 7900 7842 2372 258 91 45 chr2 42195810 42196992 -208490862 - L1MC4a LINE L1 -117 7691 6510 23 0 0 0 chr2 42197027 42197050 -208490804 + AT_rich Low_complexity Low_complexity 1 23 0 3547 220 60 66 chr2 42197067 42197450 -208490404 - L1MB7 LINE L1 -18 6166 5782 342 0 0 0 chr2 42197450 42197488 -208490366 + (TA)n Simple_repeat Simple_repeat 1 38 0 3547 220 60 66 chr2 42197488 42198972 -208488882 - L1MB7 LINE L1 -402 5782 4329 856 118 0 0 chr2 42198972 42199108 -208488746 - L1MA5 LINE L1 -2 6298 6163 3547 220 60 66 chr2 42199108 42199212 -208488642 - L1MB7 LINE L1 -1855 4329 4226 1015 120 0 0 chr2 42199344 42199494 -208488360 - FRAM SINE Alu -7 169 20 24 32 0 0 chr2 42199988 42200019 -208487835 + AT_rich Low_complexity Low_complexity 1 31 0 4515 137 12 3 chr2 42200584 42201316 -208486538 + L1MA2 LINE L1 5521 6259 -45 495 120 0 0 chr2 42201316 42201391 -208486463 + AluS SINE Alu 231 305 -5 28 29 0 0 chr2 42201465 42201500 -208486354 + AT_rich Low_complexity Low_complexity 1 35 0 361 312 23 46 chr2 42201834 42202007 -208485847 - L1MC4a LINE L1 -1962 5846 5678 368 320 137 17 chr2 42202260 42202435 -208485419 - MIR SINE MIR -11 251 56 655 142 9 0 chr2 42202782 42202888 -208484966 + THE1B LTR MaLR 258 364 0 30 27 0 0 chr2 42203038 42203075 -208484779 + AT_rich Low_complexity Low_complexity 1 37 0 951 145 27 32 chr2 42203077 42203263 -208484591 - L1MA1 LINE L1 -8 6294 6110 29 60 0 0 chr2 42204827 42204877 -208482977 + AT_rich Low_complexity Low_complexity 1 50 0 278 298 0 0 chr2 42206924 42207008 -208480846 - L1MC4 LINE L1 -1345 6697 6614 243 286 20 41 chr2 42206928 42207026 -208480828 + L1MC4 LINE L1 6618 6713 -1329 * 244 254 0 0 chr2 42208418 42208473 -208479381 + (TA)n Simple_repeat Simple_repeat 2 56 0 180 343 82 45 chr2 42209290 42209424 -208478430 + L2 LINE L2 2839 2977 -337 2216 101 3 7 chr2 42209658 42209965 -208477889 - AluSx SINE Alu -6 306 1 2031 123 6 63 chr2 42210699 42211283 -208476571 + MER51A LTR ERV1 1 633 -1 930 129 18 6 chr2 42211450 42211613 -208476241 - L1MB2 LINE L1 -3 6168 6004 2575 52 3 0 chr2 42211893 42212202 -208475652 - AluY SINE Alu -1 310 1 713 318 90 50 chr2 42212205 42214083 -208473771 - L1MC4a LINE L1 -841 5305 3352 * 1339 282 99 36 chr2 42214038 42214546 -208473308 + L1ME3 LINE L1 4559 5033 -1129 770 167 0 6 chr2 42214546 42214702 -208473152 - L1MA4 LINE L1 -1 6299 6145 1339 282 99 36 chr2 42214702 42215639 -208472215 + L1ME3 LINE L1 5033 6129 -33 1838 149 87 0 chr2 42216247 42216568 -208471286 - THE1B LTR MaLR -15 349 1 27 0 0 0 chr2 42216772 42216799 -208471055 + AT_rich Low_complexity Low_complexity 1 27 0 4372 160 103 43 chr2 42216907 42217850 -208470004 + L1MC1 LINE L1 5333 6331 -2 23 0 0 0 chr2 42218694 42218717 -208469137 + AT_rich Low_complexity Low_complexity 1 23 0 281 294 24 4 chr2 42219528 42219677 -208468177 + MIR SINE MIR 44 250 -12 239 333 0 0 chr2 42219690 42219765 -208468089 + MIR3 SINE MIR 121 195 -13 250 218 36 0 chr2 42220037 42220092 -208467762 - MER5A DNA MER1_type -132 57 1 616 87 87 10 chr2 42220656 42220760 -208467094 + L1MA3 LINE L1 6186 6297 -8 734 86 76 0 chr2 42221060 42221165 -208466689 - L1PA7 LINE L1 -8 6146 6034 2345 80 0 10 chr2 42221273 42221585 -208466269 - AluY SINE Alu -2 309 1 1193 250 20 36 chr2 42222268 42222712 -208465142 - L1MDb LINE L1 -5073 1336 900 1865 99 11 0 chr2 42223053 42223315 -208464539 + AluSq SINE Alu 43 307 -6 435 310 16 75 chr2 42223691 42223946 -208463908 - MLT1J LTR MaLR -112 399 160 572 206 108 77 chr2 42224197 42224279 -208463575 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42224279 42224713 -208463141 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42224713 42224824 -208463030 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42224870 42224894 -208462960 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42224987 42225051 -208462803 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42227502 42227679 -208460175 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42227888 42227948 -208459906 + (TA)n Simple_repeat Simple_repeat 1 59 0 266 164 0 16 chr2 42228188 42228249 -208459605 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42228254 42228502 -208459352 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42229853 42230060 -208457794 - L1MDa LINE L1 -4868 2270 2055 216 0 0 0 chr2 42230200 42230224 -208457630 + (TA)n Simple_repeat Simple_repeat 1 24 0 3248 258 40 15 chr2 42230333 42231698 -208456156 - L1MDa LINE L1 -2751 4206 2801 624 248 32 6 chr2 42231708 42231865 -208455989 - L1MDa LINE L1 -6538 321 161 314 308 59 18 chr2 42231866 42232035 -208455819 + L1MB7 LINE L1 5709 5884 -300 23 33 0 0 chr2 42232070 42232100 -208455754 + AT_rich Low_complexity Low_complexity 1 30 0 334 266 35 131 chr2 42232363 42232592 -208455262 - L2 LINE L2 0 3313 3107 2078 106 7 0 chr2 42232592 42232892 -208454962 + AluSx SINE Alu 11 312 0 297 214 344 30 chr2 42232948 42233079 -208454775 + MER5A DNA MER1_type 11 182 -7 11365 30 2 0 chr2 42233562 42235328 -208452526 + L1P1 LINE L1 4028 5796 -359 191 355 60 63 chr2 42235334 42235602 -208452252 + L2 LINE L2 1978 2244 -1070 323 316 52 29 chr2 42236394 42236530 -208451324 + L2 LINE L2 3134 3272 0 373 308 58 46 chr2 42237816 42238056 -208449798 + MIR SINE MIR 8 250 -12 443 322 77 36 chr2 42239595 42240000 -208447854 + L1ME4a LINE L1 3911 4339 -1807 706 297 121 7 chr2 42240242 42240532 -208447322 + MLT1K LTR MaLR 266 588 0 581 281 67 52 chr2 42241005 42241606 -208446248 + L1ME4a LINE L1 5405 6015 -106 2163 112 7 3 chr2 42241712 42242016 -208445838 - AluSq SINE Alu -8 305 1 760 113 16 0 chr2 42242884 42243015 -208444839 - L1PA12 LINE L1 -234 5934 5797 877 57 89 0 chr2 42243815 42243939 -208443915 - MER85 DNA T2_type -3 136 2 703 285 97 13 chr2 42243998 42244226 -208443628 + MIR SINE MIR 16 262 0 210 179 26 0 chr2 42244311 42244350 -208443504 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 227 203 0 68 chr2 42245093 42245167 -208442687 - Charlie8 DNA MER1_type -841 1576 1508 22 35 0 0 chr2 42245315 42245344 -208442510 + AT_rich Low_complexity Low_complexity 1 29 0 1856 186 113 7 chr2 42246238 42246646 -208441208 + MER74C LTR ERVL 1 451 -9 195 308 84 37 chr2 42247146 42247253 -208440601 + MIR SINE MIR 10 121 -141 2531 176 22 56 chr2 42247253 42247786 -208440068 + MLT2B2 LTR ERVL 1 515 0 197 269 45 15 chr2 42247945 42248012 -208439842 + MIR SINE MIR 120 188 -74 199 264 57 0 chr2 42248117 42248170 -208439684 - L2 LINE L2 -7 3306 3251 23 54 0 0 chr2 42248314 42248351 -208439503 + AT_rich Low_complexity Low_complexity 1 37 0 1992 168 35 10 chr2 42248517 42248530 -208439324 - L1MB7 LINE L1 -178 6006 5995 815 93 29 21 chr2 42248530 42248670 -208439184 - L1MB8 LINE L1 0 6178 6038 1992 168 35 10 chr2 42248670 42249060 -208438794 - L1MB7 LINE L1 -189 5995 5593 18303 65 16 3 chr2 42249094 42252345 -208435509 - L1PA6 LINE L1 -11 6143 2884 264 293 13 0 chr2 42253167 42253242 -208434612 + MIR3 SINE MIR 126 201 -7 411 38 0 0 chr2 42253882 42253935 -208433919 + (CA)n Simple_repeat Simple_repeat 2 54 0 338 274 13 105 chr2 42254165 42254318 -208433536 - MIR SINE MIR -73 189 51 23 68 0 0 chr2 42254522 42254566 -208433288 + AT_rich Low_complexity Low_complexity 1 44 0 40 49 0 0 chr2 42254624 42254685 -208433169 + AT_rich Low_complexity Low_complexity 1 61 0 2001 237 36 5 chr2 42254700 42255147 -208432707 + MLT2B2 LTR ERVL 1 461 -54 210 208 0 0 chr2 42255149 42255197 -208432657 + (TG)n Simple_repeat Simple_repeat 2 49 0 238 405 101 35 chr2 42255533 42255760 -208432094 + L2 LINE L2 3031 3272 0 1870 142 29 26 chr2 42255962 42256273 -208431581 + AluSx SINE Alu 1 312 0 225 333 0 24 chr2 42256294 42256378 -208431476 + MLT1J2 LTR MaLR 153 234 -315 251 85 85 68 chr2 42256522 42256581 -208431273 + MLT1J2 LTR MaLR 364 423 -27 830 338 91 51 chr2 42257046 42257863 -208429991 - L2 LINE L2 -299 3014 2166 253 258 0 67 chr2 42258459 42258548 -208429306 + LTR67 LTR ERVL 427 509 -48 279 133 0 0 chr2 42258683 42258728 -208429126 + (TA)n Simple_repeat Simple_repeat 1 45 0 1563 187 53 11 chr2 42258728 42259011 -208428843 - AluJb SINE Alu -17 295 1 4278 216 42 19 chr2 42259196 42259765 -208428089 + L1MD1 LINE L1 4730 5285 -957 2063 106 0 50 chr2 42259765 42260087 -208427767 + AluSp SINE Alu 1 306 -7 4278 216 42 19 chr2 42260087 42260984 -208426870 + L1MD1 LINE L1 5285 6229 -13 307 278 104 35 chr2 42261439 42261554 -208426300 + MIR SINE MIR 5 127 -135 234 0 0 0 chr2 42261976 42262002 -208425852 + (TTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 42262957 42262978 -208424876 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 42263695 42263716 -208424138 + AT_rich Low_complexity Low_complexity 1 21 0 1866 152 0 3 chr2 42263740 42264051 -208423803 - AluSq SINE Alu 0 312 3 183 320 0 13 chr2 42264199 42264277 -208423577 - MIR SINE MIR -138 124 48 307 297 119 11 chr2 42264539 42264724 -208423130 + L1ME LINE L1 4068 4272 -1874 1286 111 10 0 chr2 42264825 42265024 -208422830 + L1MA6 LINE L1 6100 6300 0 1037 260 24 12 chr2 42265032 42265508 -208422346 + L1ME LINE L1 5122 5603 -559 1008 270 20 27 chr2 42265530 42265823 -208422031 - MLT1A1 LTR MaLR -74 291 1 22 0 0 0 chr2 42266040 42266062 -208421792 + AT_rich Low_complexity Low_complexity 1 22 0 1838 124 10 33 chr2 42266328 42266627 -208421227 - AluSq SINE Alu 0 313 22 2678 99 0 3 chr2 42268668 42269033 -208418821 + THE1B LTR MaLR 1 364 0 193 368 53 34 chr2 42269086 42269409 -208418445 - L2 LINE L2 -569 2745 2417 1913 150 0 3 chr2 42270218 42270511 -208417343 - AluSx SINE Alu -15 297 6 211 291 142 30 chr2 42270522 42270656 -208417198 - MIR SINE MIR -74 188 40 583 221 66 7 chr2 42270682 42270818 -208417036 + MER20 DNA MER1_type 18 161 -58 222 37 0 0 chr2 42270840 42270867 -208416987 + (CA)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr2 42271094 42271115 -208416739 + AT_rich Low_complexity Low_complexity 1 21 0 315 310 31 0 chr2 42271215 42271344 -208416510 + (CATATA)n Simple_repeat Simple_repeat 2 134 0 333 47 0 0 chr2 42272151 42272194 -208415660 + (TA)n Simple_repeat Simple_repeat 2 44 0 2306 90 0 3 chr2 42272194 42272495 -208415359 - AluSc SINE Alu -9 300 1 1406 139 83 0 chr2 42274035 42274287 -208413567 - L1MA5A LINE L1 -10 6287 6015 518 271 52 97 chr2 42274330 42274389 -208413465 + MLT1J LTR MaLR 110 170 -341 1930 201 18 13 chr2 42274389 42274783 -208413071 + MSTD LTR MaLR 1 396 0 518 271 52 97 chr2 42274783 42275144 -208412710 + MLT1J LTR MaLR 170 511 0 27 29 0 0 chr2 42275595 42275629 -208412225 + AT_rich Low_complexity Low_complexity 1 34 0 10258 144 49 26 chr2 42276211 42277866 -208409988 - Tigger2 DNA MER2_type -5 2713 1011 1467 155 19 0 chr2 42277866 42278130 -208409724 + L1PB1 LINE L1 5882 6150 -1 10258 144 49 26 chr2 42278130 42278299 -208409555 - Tigger2 DNA MER2_type -1707 1011 847 269 272 81 69 chr2 42279818 42279991 -208407863 - MIR SINE MIR -51 211 37 187 231 0 0 chr2 42280090 42280129 -208407725 - MIR SINE MIR -28 234 196 336 237 92 66 chr2 42280710 42280862 -208406992 - L1ME4a LINE L1 0 6121 5966 802 173 0 0 chr2 42280882 42281015 -208406839 - FLAM_C SINE Alu 0 133 1 2249 98 0 16 chr2 42281253 42281559 -208406295 + AluSg SINE Alu 4 304 -6 610 299 67 9 chr2 42281792 42282016 -208405838 - MIR SINE MIR -24 238 2 * 3378 316 123 23 chr2 42282016 42282548 -208405306 + L2 LINE L2 666 1139 -2174 6167 93 20 15 chr2 42282548 42283834 -208404020 + L1PA11 LINE L1 4657 5946 -228 2494 59 0 3 chr2 42283834 42284139 -208403715 + AluY SINE Alu 1 304 -7 6167 93 20 15 chr2 42284139 42284369 -208403485 + L1PA11 LINE L1 5946 6173 -1 3378 316 123 23 chr2 42284369 42286239 -208401615 + L2 LINE L2 1139 3313 0 22 0 0 0 chr2 42286582 42286604 -208401250 + AT_rich Low_complexity Low_complexity 1 22 0 442 275 14 43 chr2 42286792 42286930 -208400924 - L2 LINE L2 0 3313 3180 209 180 20 0 chr2 42287226 42287276 -208400578 + (TA)n Simple_repeat Simple_repeat 2 52 0 186 43 0 0 chr2 42288128 42288151 -208399703 + (TG)n Simple_repeat Simple_repeat 2 24 0 290 353 79 16 chr2 42288485 42288675 -208399179 + MIR SINE MIR 20 221 -41 23 54 0 0 chr2 42288828 42288865 -208398989 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 42288950 42288982 -208398872 + AT_rich Low_complexity Low_complexity 1 32 0 355 240 78 19 chr2 42289111 42289265 -208398589 - L1MEc LINE L1 -4129 2267 2105 * 852 191 5 43 chr2 42289262 42289472 -208398382 + L1MD3 LINE L1 7776 7977 -18 269 312 35 23 chr2 42289490 42289663 -208398191 + L1MEc LINE L1 1643 1817 -4579 4999 175 34 8 chr2 42289949 42291097 -208396757 + L1MA7 LINE L1 5111 6289 -2 617 251 196 19 chr2 42291130 42291548 -208396306 + L1MEc LINE L1 2238 2729 -3486 1010 306 88 30 chr2 42291586 42292591 -208395263 + L1M4 LINE L1 3964 5026 -1120 343 272 101 13 chr2 42292595 42292753 -208395101 + L1M4 LINE L1 5170 5341 -805 24 0 0 0 chr2 42293554 42293578 -208394276 + AT_rich Low_complexity Low_complexity 1 24 0 2461 66 0 0 chr2 42293892 42294196 -208393658 - AluY SINE Alu -7 304 1 1996 208 82 24 chr2 42295752 42296261 -208391593 - MER92B LTR ERV1 0 636 98 319 318 40 16 chr2 42296759 42296885 -208390969 + MIR SINE MIR 1 129 -133 946 246 50 17 chr2 42296948 42297188 -208390666 - MER82 DNA MER2_type -1 652 405 748 216 7 0 chr2 42297186 42297334 -208390520 - MER82 DNA MER2_type -476 177 29 * 249 33 0 0 chr2 42297362 42297392 -208390462 + (TG)n Simple_repeat Simple_repeat 2 31 0 2085 216 50 27 chr2 42297427 42297985 -208389869 + MER90 LTR ERV1 8 614 0 2255 199 34 44 chr2 42298188 42298751 -208389103 + MER74A LTR ERVL 1 557 -1 216 0 0 0 chr2 42299332 42299356 -208388498 + (A)n Simple_repeat Simple_repeat 1 24 0 355 312 104 45 chr2 42300259 42300270 -208387584 + MIR SINE MIR 17 26 -236 2086 133 0 3 chr2 42300270 42300570 -208387284 - AluSx SINE Alu -13 299 1 355 312 104 45 chr2 42300570 42300779 -208387075 + MIR SINE MIR 26 250 -12 26 0 0 0 chr2 42302040 42302066 -208385788 + AT_rich Low_complexity Low_complexity 1 26 0 249 170 38 0 chr2 42302572 42302625 -208385229 + L1MA9 LINE L1 6254 6308 -4 557 87 29 10 chr2 42302653 42302756 -208385098 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 553 253 140 0 chr2 42302782 42302932 -208384922 + MER63B DNA MER1_type 3 173 -263 1443 162 0 19 chr2 42302960 42303225 -208384629 + MER1B DNA MER1_type 80 339 0 595 271 43 0 chr2 42303265 42303453 -208384401 + MER63B DNA MER1_type 240 435 0 391 289 13 39 chr2 42303757 42303913 -208383941 + MIR SINE MIR 31 182 -80 582 137 0 29 chr2 42304595 42304697 -208383157 - Alu SINE Alu -5 306 208 2339 104 0 0 chr2 42304941 42305250 -208382604 - AluSx SINE Alu -3 309 1 474 18 0 0 chr2 42305413 42305468 -208382386 + (TG)n Simple_repeat Simple_repeat 2 56 0 1200 254 68 63 chr2 42306062 42306535 -208381319 + MLT1F1 LTR MaLR 71 545 -22 222 131 0 49 chr2 42308082 42308143 -208379711 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 21 0 0 0 chr2 42308398 42308419 -208379435 + AT_rich Low_complexity Low_complexity 1 21 0 2037 133 3 62 chr2 42308485 42308671 -208379183 - LTR8 LTR ERV1 0 691 534 1792 43 56 0 chr2 42308671 42308902 -208378952 - L1PA7 LINE L1 0 6154 5911 2037 133 3 62 chr2 42308902 42309069 -208378785 - LTR8 LTR ERV1 -157 534 359 2626 148 78 0 chr2 42309069 42309507 -208378347 + MER41C LTR ERV1 1 553 -82 2472 118 3 14 chr2 42309540 42309906 -208377948 - LTR8 LTR ERV1 -329 362 1 320 242 189 7 chr2 42311112 42311265 -208376589 - MIR SINE MIR -10 252 72 210 294 43 22 chr2 42311527 42311619 -208376235 - L2 LINE L2 -522 2792 2699 33 0 0 0 chr2 42311721 42311754 -208376100 + AT_rich Low_complexity Low_complexity 1 33 0 2140 321 151 25 chr2 42312022 42313689 -208374165 - L2 LINE L2 -1 3312 1409 3007 240 33 29 chr2 42314214 42315460 -208372394 + L1M1 LINE L1 2768 4008 -3557 716 196 8 8 chr2 42315460 42315593 -208372261 - FLAM_A SINE Alu 0 133 1 3007 240 33 29 chr2 42315593 42315890 -208371964 + L1M1 LINE L1 4008 4333 -3232 1791 110 93 28 chr2 42315890 42316180 -208371674 + AluY SINE Alu 1 309 -2 3007 240 33 29 chr2 42316180 42316193 -208371661 + L1M1 LINE L1 4333 4344 -3221 2143 114 0 10 chr2 42316581 42316888 -208370966 - AluSg SINE Alu -6 304 1 541 369 6 0 chr2 42317326 42317505 -208370349 - MIR SINE MIR -80 182 3 319 89 0 0 chr2 42317714 42317759 -208370095 + MADE1 DNA Mariner 36 80 0 25 0 0 0 chr2 42317877 42317902 -208369952 + AT_rich Low_complexity Low_complexity 1 25 0 1352 180 51 8 chr2 42318354 42318610 -208369244 - AluJb SINE Alu -45 267 1 240 143 0 0 chr2 42318923 42318965 -208368889 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 4148 237 24 22 chr2 42319854 42320723 -208367131 + Tigger6a DNA MER2_type 2 875 -722 1444 202 16 45 chr2 42320723 42321099 -208366755 + MLT1A1 LTR MaLR 1 365 0 4148 237 24 22 chr2 42321099 42321295 -208366559 + Tigger6a DNA MER2_type 875 1069 -14 202 250 0 0 chr2 42321297 42321341 -208366513 + (TA)n Simple_repeat Simple_repeat 1 44 0 313 227 68 23 chr2 42321342 42321430 -208366424 - L1MC4 LINE L1 -1337 6705 6614 1069 245 73 15 chr2 42321908 42322235 -208365619 + L1ME1 LINE L1 5806 6151 -15 25 0 0 0 chr2 42323049 42323074 -208364780 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 42323263 42323292 -208364562 + AT_rich Low_complexity Low_complexity 1 29 0 579 74 126 0 chr2 42323566 42323661 -208364193 - L1P4 LINE L1 -699 5467 5361 2267 148 19 0 chr2 42323664 42324042 -208363812 + L1PA16 LINE L1 5773 6157 -9 27 0 0 0 chr2 42325093 42325120 -208362734 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr2 42325386 42325408 -208362446 + AT_rich Low_complexity Low_complexity 1 22 0 25 51 0 0 chr2 42327060 42327099 -208360755 + AT_rich Low_complexity Low_complexity 1 39 0 1342 93 19 131 chr2 42327557 42327816 -208360038 - MER30 DNA MER1_type 0 230 1 27 81 0 0 chr2 42327876 42327938 -208359916 + AT_rich Low_complexity Low_complexity 1 62 0 702 276 65 53 chr2 42328001 42328342 -208359512 - L1ME3 LINE L1 -51 6111 5767 496 317 120 61 chr2 42330149 42330422 -208357432 + L3 LINE CR1 436 738 -839 1632 141 12 4 chr2 42330422 42330670 -208357184 + AluSx SINE Alu 39 288 -24 496 317 120 61 chr2 42330670 42330771 -208357083 + L3 LINE CR1 738 832 -745 214 284 91 11 chr2 42331002 42331090 -208356764 + L3 LINE CR1 1027 1121 -456 413 342 17 33 chr2 42331342 42331582 -208356272 + L3 LINE CR1 1192 1427 -150 189 0 0 0 chr2 42331701 42331722 -208356132 + (TA)n Simple_repeat Simple_repeat 1 21 0 27 29 0 0 chr2 42331722 42331756 -208356098 + AT_rich Low_complexity Low_complexity 1 34 0 5805 57 5 3 chr2 42332482 42333219 -208354635 - L1PA7 LINE L1 -5 6149 5411 201 216 0 0 chr2 42333225 42333262 -208354592 - MER5B DNA MER1_type -139 39 3 537 214 63 16 chr2 42333272 42333398 -208354456 + MER5A DNA MER1_type 1 132 -57 981 271 86 17 chr2 42333668 42334018 -208353836 + MLT1A2 LTR MaLR 1 374 0 1200 306 61 36 chr2 42334111 42334989 -208352865 - L2 LINE L2 0 3313 2423 268 310 60 35 chr2 42335240 42335356 -208352498 - L2 LINE L2 0 3272 3154 5759 153 14 42 chr2 42335509 42336739 -208351115 + L1MA4A LINE L1 5110 6302 -1 214 208 21 0 chr2 42338116 42338164 -208349690 + (TATG)n Simple_repeat Simple_repeat 3 51 0 207 69 0 0 chr2 42338423 42338452 -208349402 + (CA)n Simple_repeat Simple_repeat 2 30 0 1576 204 0 26 chr2 42340130 42340439 -208347415 - AluJb SINE Alu -11 301 1 24 0 0 0 chr2 42341338 42341362 -208346492 + AT_rich Low_complexity Low_complexity 1 24 0 1975 121 147 21 chr2 42342011 42342320 -208345534 + MSTA LTR MaLR 1 368 -60 2100 96 20 3 chr2 42342320 42342613 -208345241 - AluSc SINE Alu -11 298 1 1975 121 147 21 chr2 42342613 42342683 -208345171 + MSTA LTR MaLR 368 428 0 803 308 45 50 chr2 42342947 42343005 -208344849 - L1ME LINE L1 -4965 1164 1107 1502 196 10 26 chr2 42343005 42343316 -208344538 - AluJo SINE Alu -2 310 5 803 308 45 50 chr2 42343316 42344175 -208343679 - L1ME LINE L1 -5022 1107 403 472 242 0 0 chr2 42344925 42345024 -208342830 + FRAM SINE Alu 67 165 -11 1593 182 3 46 chr2 42345536 42345838 -208342016 - AluJb SINE Alu -19 293 5 382 328 120 12 chr2 42346047 42346373 -208341481 - L1ME LINE L1 -3520 2609 2249 1818 173 42 33 chr2 42346449 42346808 -208341046 + MLT2D LTR ERVL 5 366 -48 305 299 19 6 chr2 42346839 42346996 -208340858 + (TA)n Simple_repeat Simple_repeat 2 160 0 270 120 20 40 chr2 42346996 42347046 -208340808 + MLT2D LTR ERVL 366 414 0 351 261 89 129 chr2 42347048 42347374 -208340480 - L1ME LINE L1 -5194 925 613 278 299 0 11 chr2 42347589 42347676 -208340178 - L1ME LINE L1 -5735 384 299 21 36 0 0 chr2 42347852 42347880 -208339974 + AT_rich Low_complexity Low_complexity 1 28 0 1754 127 34 7 chr2 42349766 42350058 -208337796 - AluSx SINE Alu -12 300 1 2478 261 66 37 chr2 42351277 42351658 -208336196 + L1M1 LINE L1 2611 2979 -4586 2153 123 0 3 chr2 42351658 42351966 -208335888 + AluSx SINE Alu 1 307 -5 2478 261 66 37 chr2 42351966 42352601 -208335253 + L1M1 LINE L1 2979 3696 -3869 390 21 0 0 chr2 42352601 42352648 -208335206 + (CA)n Simple_repeat Simple_repeat 2 48 0 2478 261 66 37 chr2 42352648 42352825 -208335029 + L1M1 LINE L1 3696 3866 -3699 842 226 49 101 chr2 42352908 42353293 -208334561 + MLT1A1 LTR MaLR 1 365 0 960 260 51 13 chr2 42353380 42353772 -208334082 + L1MEc LINE L1 1880 2286 -4110 40 59 0 0 chr2 42353865 42353933 -208333921 + AT_rich Low_complexity Low_complexity 1 68 0 22 0 0 0 chr2 42354041 42354063 -208333791 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr2 42354101 42354141 -208333713 + AT_rich Low_complexity Low_complexity 1 40 0 594 280 145 55 chr2 42354211 42354743 -208333111 - L1 LINE L1 -1809 4337 3758 22 0 0 0 chr2 42355324 42355346 -208332508 + AT_rich Low_complexity Low_complexity 1 22 0 404 125 0 0 chr2 42355353 42355409 -208332445 + AluS SINE Alu 220 275 -26 198 0 0 0 chr2 42355414 42355436 -208332418 + (TAA)n Simple_repeat Simple_repeat 2 23 0 28 0 0 0 chr2 42356200 42356228 -208331626 + AT_rich Low_complexity Low_complexity 1 28 0 355 282 120 40 chr2 42356675 42356976 -208330878 - HAL1b LINE L1 -710 638 314 378 323 86 14 chr2 42357340 42357660 -208330194 - L1MC/D LINE L1 -590 5572 5265 4435 45 21 56 chr2 42357661 42358746 -208329108 - MER11A LTR ERVK 0 1266 1 200 191 43 0 chr2 42358797 42358844 -208329010 + (TATG)n Simple_repeat Simple_repeat 3 51 0 24 0 0 0 chr2 42359027 42359051 -208328803 + AT_rich Low_complexity Low_complexity 1 24 0 411 335 244 16 chr2 42359316 42359800 -208328054 + L3 LINE CR1 979 1572 -5 1425 116 0 5 chr2 42360105 42360304 -208327550 - AluSg/x SINE Alu -15 297 100 189 226 0 0 chr2 42361281 42361334 -208326520 + CT-rich Low_complexity Low_complexity 4 56 0 21 36 0 0 chr2 42361410 42361438 -208326416 + AT_rich Low_complexity Low_complexity 1 28 0 217 333 57 9 chr2 42362998 42363103 -208324751 - L2 LINE L2 -36 3277 3168 399 266 87 29 chr2 42363298 42363471 -208324383 - MLT1K LTR MaLR -27 561 379 1389 253 70 66 chr2 42364280 42364869 -208322985 - MLT1E LTR MaLR -1 592 2 351 245 245 0 chr2 42365240 42365338 -208322516 - FLAM_A SINE Alu -11 122 1 266 277 20 10 chr2 42365346 42365447 -208322407 + MLT1J2 LTR MaLR 61 162 -288 772 293 63 6 chr2 42365730 42366048 -208321806 + HAL1b LINE L1 279 614 -734 27 0 0 0 chr2 42366314 42366341 -208321513 + AT_rich Low_complexity Low_complexity 1 27 0 345 309 43 24 chr2 42366410 42366620 -208321234 + L1MC4a LINE L1 2154 2367 -3779 239 216 62 41 chr2 42367125 42367222 -208320632 + L1MC4a LINE L1 2919 3017 -3129 32 57 0 0 chr2 42367319 42367372 -208320482 + AT_rich Low_complexity Low_complexity 1 53 0 261 315 0 0 chr2 42367507 42367580 -208320274 + (CA)n Simple_repeat Simple_repeat 2 74 0 34 0 0 0 chr2 42367589 42367623 -208320231 + AT_rich Low_complexity Low_complexity 1 34 0 339 275 54 22 chr2 42367836 42368083 -208319771 + L1MC4a LINE L1 3563 3819 -2327 304 289 51 101 chr2 42368128 42368596 -208319258 - L2 LINE L2 -4 3309 2 415 292 60 66 chr2 42368965 42369845 -208318009 + L1MC4a LINE L1 4161 5035 -1111 24 53 0 0 chr2 42369984 42370022 -208317832 + AT_rich Low_complexity Low_complexity 1 38 0 1246 277 70 106 chr2 42370153 42370502 -208317352 + L2 LINE L2 2402 2762 -551 1936 141 13 0 chr2 42370502 42370807 -208317047 + AluSx SINE Alu 1 309 -3 1246 277 70 106 chr2 42370807 42371389 -208316465 + L2 LINE L2 2762 3313 0 1025 297 129 9 chr2 42371411 42371993 -208315861 + L1MC4a LINE L1 5410 6061 -1747 379 286 143 11 chr2 42373903 42374078 -208313776 - MIR SINE MIR -31 231 34 611 263 45 28 chr2 42374321 42374500 -208313354 - LTR16A LTR ERVL -9 441 260 27 0 0 0 chr2 42374611 42374638 -208313216 + AT_rich Low_complexity Low_complexity 1 27 0 5093 16 0 0 chr2 42374638 42375219 -208312635 - L1PA3 LINE L1 -1 6154 5574 2418 27 7 0 chr2 42375219 42375514 -208312340 + L1PA3 LINE L1 5285 5581 -574 230 304 144 17 chr2 42375977 42376276 -208311578 + L1ME3A LINE L1 4511 4847 -1299 403 256 111 26 chr2 42376496 42376782 -208311072 + L1ME3A LINE L1 5192 5502 -660 300 261 148 40 chr2 42376967 42377143 -208310711 + L1ME3A LINE L1 5756 5950 -220 22 0 0 0 chr2 42377199 42377221 -208310633 + AT_rich Low_complexity Low_complexity 1 22 0 230 239 11 0 chr2 42379420 42379512 -208308342 + (TA)n Simple_repeat Simple_repeat 1 93 0 301 276 120 89 chr2 42380043 42380369 -208307485 + MLT1H1 LTR MaLR 104 439 -110 1385 226 34 15 chr2 42380387 42380714 -208307140 - MER58B DNA MER1_type -5 336 4 350 164 87 29 chr2 42380714 42380815 -208307039 + MLT1H1 LTR MaLR 449 555 0 227 324 111 19 chr2 42381340 42381448 -208306406 + L3b LINE CR1 1455 1572 -11 198 171 0 0 chr2 42381672 42381713 -208306141 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 189 0 0 0 chr2 42381971 42381992 -208305862 + (CA)n Simple_repeat Simple_repeat 1 21 0 1642 215 25 6 chr2 42382236 42382594 -208305260 + MLT1A1 LTR MaLR 1 365 0 189 0 0 0 chr2 42383138 42383159 -208304695 + (TA)n Simple_repeat Simple_repeat 2 22 0 559 382 35 19 chr2 42383343 42383472 -208304382 + L2 LINE L2 2524 2649 -665 1153 235 75 17 chr2 42383472 42383817 -208304037 - MLT1A1 LTR MaLR 0 365 1 559 382 35 19 chr2 42383817 42384119 -208303735 + L2 LINE L2 2649 2962 -352 536 149 0 11 chr2 42384310 42384397 -208303457 - LTR23 LTR ERV1 -32 405 320 378 282 28 56 chr2 42384432 42384574 -208303280 - L2 LINE L2 -12 3260 3123 180 97 0 0 chr2 42385042 42385073 -208302781 + (T)n Simple_repeat Simple_repeat 1 31 0 9413 210 24 18 chr2 42385375 42388000 -208299854 + L1MA5A LINE L1 2558 5202 -1646 3827 193 51 12 chr2 42387986 42388965 -208298889 + L1PB4 LINE L1 5829 6850 -8 * 4696 157 85 26 chr2 42388977 42390565 -208297289 + L1MA5A LINE L1 5183 6997 -2 327 339 35 0 chr2 42390584 42390699 -208297155 - MIR SINE MIR -65 197 79 866 20 0 0 chr2 42390724 42390826 -208297028 + L1PA2 LINE L1 6053 6154 -1 279 261 42 35 chr2 42390839 42390981 -208296873 - L1ME3A LINE L1 -10 6160 6018 5335 264 43 36 chr2 42390983 42392518 -208295336 + L1M4 LINE L1 10 1532 -5427 1464 225 48 19 chr2 42392518 42392783 -208295071 + MLT1B LTR MaLR 1 282 -108 1878 138 7 23 chr2 42392783 42393088 -208294766 + AluSc SINE Alu 1 300 -9 1464 225 48 19 chr2 42393088 42393200 -208294654 + MLT1B LTR MaLR 282 389 -1 5335 264 43 36 chr2 42393200 42393811 -208294043 + L1M4 LINE L1 1532 2178 -4781 2147 126 0 13 chr2 42393811 42394128 -208293726 + AluSq SINE Alu 1 313 0 5335 264 43 36 chr2 42394128 42394212 -208293642 + L1M4 LINE L1 2178 2260 -4699 1302 254 60 20 chr2 42394321 42394774 -208293080 + L1M4 LINE L1 4486 4956 -2001 2057 240 56 38 chr2 42394807 42395196 -208292658 + L1M4 LINE L1 5380 5788 -1169 2164 118 3 3 chr2 42395196 42395502 -208292352 + AluSc SINE Alu 1 306 -3 2057 240 56 38 chr2 42395502 42395795 -208292059 + L1M4 LINE L1 5788 6074 -883 267 292 52 30 chr2 42395785 42396089 -208291765 - L1MDa LINE L1 -4815 1725 1510 * 1366 188 100 26 chr2 42397137 42397478 -208290376 + MLT2D LTR ERVL 1 366 -48 258 32 0 0 chr2 42397481 42397512 -208290342 + (TA)n Simple_repeat Simple_repeat 1 31 0 307 267 0 0 chr2 42397512 42397602 -208290252 + L1MC4 LINE L1 6614 6703 -1339 261 233 35 0 chr2 42397561 42397647 -208290207 - L1MC4 LINE L1 -1340 6702 6614 * 231 196 0 0 chr2 42397678 42397724 -208290130 + MLT2D LTR ERVL 352 397 0 398 310 55 56 chr2 42399187 42399902 -208287952 - L1ME3A LINE L1 -220 5950 5217 340 320 76 41 chr2 42400017 42400106 -208287748 - L1ME3A LINE L1 -1082 5064 4980 2776 168 6 2 chr2 42400106 42400589 -208287265 - MER31A LTR ERV1 0 485 1 340 320 76 41 chr2 42400589 42401301 -208286553 - L1ME3A LINE L1 -1166 4980 4235 295 286 44 11 chr2 42401430 42401521 -208286333 + MER5A DNA MER1_type 13 106 -83 733 297 121 57 chr2 42401781 42402252 -208285602 + L2 LINE L2 2812 3312 -1 749 268 50 18 chr2 42402746 42402966 -208284888 + MIR SINE MIR 36 262 0 188 342 142 0 chr2 42403957 42404077 -208283777 + MIR SINE MIR 95 231 -31 814 208 51 115 chr2 42404154 42404544 -208283310 + MLT1A1 LTR MaLR 1 365 0 2952 261 69 9 chr2 42404561 42405358 -208282496 - HERVL-B3 LTR ERVL -4809 845 1 249 173 19 0 chr2 42405362 42405414 -208282440 - MLT2B3 LTR ERVL -4 516 464 950 207 54 89 chr2 42405414 42405694 -208282160 - MLT2B3 LTR ERVL -218 336 67 488 114 0 0 chr2 42405798 42405868 -208281986 - MLT2B3 LTR ERVL -484 70 1 3870 198 40 1 chr2 42406907 42408133 -208279721 - L1MC1 LINE L1 -323 6010 4735 * 9655 183 98 30 chr2 42408129 42410160 -208277694 - L1M2 LINE L1 -4679 2170 2 258 148 0 0 chr2 42410986 42411047 -208276807 - L1MA7 LINE L1 -1 6290 6230 701 252 14 0 chr2 42411051 42411194 -208276660 - FRAM SINE Alu -30 146 2 1081 316 48 45 chr2 42411472 42411989 -208275865 + L2 LINE L2 2505 3021 -292 1890 162 18 21 chr2 42412172 42412506 -208275348 - MER1B DNA MER1_type -6 333 1 256 188 12 129 chr2 42412506 42412554 -208275300 + MLT1-int LTR MaLR 433 468 -903 2247 88 0 0 chr2 42412554 42412851 -208275003 + AluY SINE Alu 1 297 -14 256 188 12 129 chr2 42412851 42412887 -208274967 + MLT1-int LTR MaLR 468 507 -864 2486 48 0 0 chr2 42413932 42414227 -208273627 - AluY SINE Alu -16 295 1 241 372 54 14 chr2 42414279 42414427 -208273427 - L2 LINE L2 -589 2725 2572 2604 99 8 6 chr2 42415161 42415524 -208272330 - THE1B LTR MaLR 0 364 1 3702 203 55 7 chr2 42415900 42416841 -208271013 - L1MB4 LINE L1 0 6180 5188 425 292 146 11 chr2 42417393 42417578 -208270276 - MIR SINE MIR -5 257 48 1364 190 52 28 chr2 42419211 42419500 -208268354 + AluJb SINE Alu 1 296 -16 27 29 0 0 chr2 42419501 42419535 -208268319 + AT_rich Low_complexity Low_complexity 1 34 0 301 193 0 96 chr2 42419535 42419618 -208268236 - L1MB7 LINE L1 -4 6180 6106 376 305 47 14 chr2 42419925 42420138 -208267716 + L1ME3A LINE L1 4571 4790 -1356 243 0 0 0 chr2 42420160 42420187 -208267667 + (CA)n Simple_repeat Simple_repeat 2 28 0 410 302 96 50 chr2 42420285 42420878 -208266976 + L1ME3A LINE L1 4967 5594 -570 353 301 20 0 chr2 42420884 42421030 -208266824 + L1ME3A LINE L1 5802 5950 -220 1103 185 110 55 chr2 42421053 42421399 -208266455 - MLT1A1 LTR MaLR 0 365 1 243 317 0 12 chr2 42422181 42422263 -208265591 + MIR SINE MIR 53 133 -129 266 326 0 113 chr2 42423151 42423292 -208264562 - MER5A DNA MER1_type -25 164 40 24 32 0 0 chr2 42423329 42423360 -208264494 + AT_rich Low_complexity Low_complexity 1 31 0 354 318 45 62 chr2 42423476 42423652 -208264202 + MIR SINE MIR 19 191 -71 757 221 138 0 chr2 42424521 42424702 -208263152 - MER6B DNA MER2_type -1 209 4 1633 215 6 36 chr2 42425622 42426094 -208261760 - MER89 LTR ERV1 0 559 2 505 364 37 12 chr2 42428773 42429015 -208258839 - MIR SINE MIR -14 248 1 284 358 122 25 chr2 42430220 42430952 -208256902 + L2 LINE L2 1383 2185 -1129 218 271 112 9 chr2 42431232 42431339 -208256515 + L2 LINE L2 3195 3312 -1 871 246 55 67 chr2 42432540 42432870 -208254984 - L2 LINE L2 0 3313 2988 2867 182 25 7 chr2 42433109 42433659 -208254195 - L1MC3 LINE L1 -8 7777 7218 219 333 126 0 chr2 42435611 42435722 -208252132 + L2 LINE L2 3189 3313 0 273 353 66 7 chr2 42435836 42435972 -208251882 - L2 LINE L2 -8 3264 3121 391 257 46 46 chr2 42436211 42436386 -208251468 - MER5B DNA MER1_type 0 178 4 990 184 53 60 chr2 42436586 42436852 -208251002 - AluJo SINE Alu 0 312 49 25 65 0 0 chr2 42437166 42437212 -208250642 + AT_rich Low_complexity Low_complexity 1 46 0 342 268 69 104 chr2 42437781 42438128 -208249726 - MLT1J LTR MaLR -54 457 123 2081 136 3 0 chr2 42439137 42439446 -208248408 - AluSq SINE Alu -3 310 1 1658 169 10 16 chr2 42440287 42440594 -208247260 - AluJo SINE Alu -7 305 1 850 188 0 0 chr2 42441853 42441991 -208245863 + Tigger3(Golem) DNA MER2_type 2888 3025 -4 1547 135 0 4 chr2 42441994 42442239 -208245615 - L1MA9 LINE L1 -77 6235 5992 584 319 64 13 chr2 42445728 42445963 -208241891 + MIR SINE MIR 3 249 -13 2180 88 0 39 chr2 42447623 42447928 -208239926 + AluSc SINE Alu 1 293 -16 1536 172 0 18 chr2 42448277 42448556 -208239298 - AluJb SINE Alu -4 308 35 1148 270 84 26 chr2 42448725 42449343 -208238511 + HsTC2c DNA Tc2 3 726 -3 476 113 0 78 chr2 42449465 42449585 -208238269 - L1P5 LINE L1 -465 5686 5582 1689 165 37 40 chr2 42449585 42449961 -208237893 + THE1C LTR MaLR 1 375 0 3999 118 62 10 chr2 42449961 42450586 -208237268 + THE1C-int LTR MaLR 1 658 -922 1976 152 133 5 chr2 42450586 42450955 -208236899 + MSTA LTR MaLR 13 428 0 346 355 85 20 chr2 42451081 42451329 -208236525 - L2 LINE L2 -199 3073 2810 22 0 0 0 chr2 42452179 42452201 -208235653 + AT_rich Low_complexity Low_complexity 1 22 0 487 280 76 14 chr2 42452959 42453170 -208234684 - LTR33A LTR ERVL -27 496 273 399 287 69 35 chr2 42453587 42453761 -208234093 - LTR16A1 LTR ERVL -12 445 266 386 226 57 16 chr2 42453843 42453967 -208233887 - LTR16A1 LTR ERVL -311 146 18 227 176 0 39 chr2 42455153 42455204 -208232650 - MLT1D LTR MaLR 0 626 578 2264 120 0 0 chr2 42455234 42455534 -208232320 + AluSx SINE Alu 1 300 -12 938 228 111 66 chr2 42455565 42455942 -208231912 - MLT1D LTR MaLR -66 439 46 265 235 74 74 chr2 42456374 42456536 -208231318 + L2 LINE L2 3102 3263 -50 193 324 73 0 chr2 42457000 42457068 -208230786 - L2 LINE L2 -3 3269 3197 3273 147 9 40 chr2 42457145 42457715 -208230139 - MLT2B3 LTR ERVL -2 552 1 677 308 156 11 chr2 42458089 42458531 -208229323 + L2 LINE L2 2808 3313 0 204 40 0 0 chr2 42458630 42458655 -208229199 + (TC)n Simple_repeat Simple_repeat 1 25 0 1697 132 31 0 chr2 42459456 42459743 -208228111 - L1MA5 LINE L1 -5 6295 6000 1977 136 27 0 chr2 42460021 42460316 -208227538 - AluSx SINE Alu -9 303 1 2092 203 87 31 chr2 42460814 42461355 -208226499 + L1MC3 LINE L1 7207 7777 -8 21 0 0 0 chr2 42461371 42461392 -208226462 + AT_rich Low_complexity Low_complexity 1 21 0 242 250 36 12 chr2 42461412 42461496 -208226358 - Charlie5 DNA MER1_type -2502 110 25 260 232 78 99 chr2 42461644 42461928 -208225926 - L1MEc LINE L1 -2954 3261 2984 310 273 79 104 chr2 42462097 42462775 -208225079 - L1MEc LINE L1 -4686 1710 1060 7932 80 4 6 chr2 42462775 42463848 -208224006 + MER11C LTR ERVK 1 1071 0 310 273 79 104 chr2 42463848 42464093 -208223761 - L1MEc LINE L1 -5336 1060 810 255 289 44 0 chr2 42464235 42464349 -208223505 + L1MC4a LINE L1 5808 5926 -1882 4586 140 18 27 chr2 42464757 42465538 -208222316 + L1PA12 LINE L1 5392 6165 -3 30 45 0 0 chr2 42465720 42465764 -208222090 + AT_rich Low_complexity Low_complexity 1 44 0 289 252 23 84 chr2 42465931 42466062 -208221792 - L3 LINE CR1 -129 1448 1326 473 284 115 29 chr2 42466757 42467334 -208220520 - L1ME LINE L1 -341 5890 5212 1923 101 3 60 chr2 42467334 42467652 -208220202 - AluSc SINE Alu -7 302 3 473 284 115 29 chr2 42467652 42467890 -208219964 - L1ME LINE L1 -1019 5212 4996 2147 128 0 6 chr2 42467955 42468267 -208219587 - AluSx SINE Alu 0 312 3 316 243 99 9 chr2 42468728 42468839 -208219015 - L1ME3A LINE L1 -9 6161 6041 23 0 0 0 chr2 42468847 42468870 -208218984 + AT_rich Low_complexity Low_complexity 1 23 0 369 323 91 25 chr2 42469056 42469452 -208218402 - L1ME LINE L1 -1999 4216 3795 304 298 128 24 chr2 42469591 42470171 -208217683 - L1ME LINE L1 -3221 2994 2355 255 273 73 9 chr2 42470176 42470286 -208217568 - L1MC4 LINE L1 0 8042 7926 421 236 171 0 chr2 42470380 42470520 -208217334 - L1MC4 LINE L1 -126 7916 7753 447 245 52 0 chr2 42470534 42470726 -208217128 - L1ME LINE L1 -678 5484 5283 1116 287 96 9 chr2 42470734 42471431 -208216423 - L1ME LINE L1 -833 5313 4556 189 215 25 25 chr2 42472709 42472788 -208215066 + CT-rich Low_complexity Low_complexity 3 81 0 813 239 65 26 chr2 42472829 42473059 -208214795 - LTR16B LTR ERVL -4 460 222 1678 189 3 10 chr2 42473272 42473569 -208214285 - AluJb SINE Alu -17 295 1 21 36 0 0 chr2 42473703 42473731 -208214123 + AT_rich Low_complexity Low_complexity 1 28 0 2799 181 23 4 chr2 42473887 42474413 -208213441 - MER34B LTR ERV1 -29 536 1 2723 176 45 12 chr2 42474559 42475065 -208212789 + LTR45 LTR ERV1 1 523 -2 1251 236 82 64 chr2 42475299 42475322 -208212532 - MER34C LTR ERV1 0 585 564 2207 197 45 94 chr2 42475322 42476048 -208211806 - LTR8 LTR ERV1 0 691 1 1251 236 82 64 chr2 42476048 42476599 -208211255 - MER34C LTR ERV1 -21 564 1 2880 191 40 11 chr2 42477343 42477955 -208209899 + MER39 LTR ERV1 3 672 -35 1206 222 186 11 chr2 42478194 42478564 -208209290 + MLT1C LTR MaLR 18 452 -15 369 325 15 66 chr2 42478584 42478781 -208209073 + L1MEc LINE L1 1088 1274 -5122 1493 243 39 74 chr2 42478789 42479428 -208208426 - L1ME LINE L1 -5476 920 304 569 294 60 0 chr2 42479435 42479619 -208208235 - L1ME LINE L1 -6167 229 35 325 269 53 34 chr2 42480741 42480949 -208206905 - L1M4 LINE L1 -1140 5006 4795 309 268 19 70 chr2 42480966 42481123 -208206731 - L1M4 LINE L1 -1493 4653 4505 1718 148 7 11 chr2 42481123 42481429 -208206425 - AluSx SINE Alu 0 313 9 1146 232 45 17 chr2 42481628 42481986 -208205868 - L1ME2 LINE L1 -120 6044 5677 11803 101 2 2 chr2 42482101 42484590 -208203264 - L1PA7 LINE L1 0 6154 3664 1263 240 21 13 chr2 42484590 42484967 -208202887 - L1ME2 LINE L1 -487 5677 5298 293 114 58 37 chr2 42485090 42485336 -208202518 + (TA)n Simple_repeat Simple_repeat 1 251 0 847 260 60 21 chr2 42485411 42485696 -208202158 - L1MD2 LINE L1 -14 6345 6050 7568 35 10 0 chr2 42487215 42488881 -208198973 + L1PA3 LINE L1 4475 6150 -5 391 343 61 14 chr2 42489763 42490008 -208197846 + MIR SINE MIR 7 262 0 187 234 130 26 chr2 42490940 42491004 -208196850 - L3 LINE CR1 -826 751 676 7497 139 18 25 chr2 42491004 42492310 -208195544 - HSMAR2 DNA Mariner -2 1300 4 187 234 130 26 chr2 42492310 42492322 -208195532 - L3 LINE CR1 -901 676 667 190 308 31 0 chr2 42494117 42494182 -208193672 + MIR SINE MIR 184 250 -12 7280 46 1 7 chr2 42494253 42495717 -208192137 - L1PA4 LINE L1 -2 6153 4692 291 242 73 57 chr2 42496760 42496884 -208190970 + MIR SINE MIR 133 258 -4 200 194 10 31 chr2 42497006 42497104 -208190750 + (TA)n Simple_repeat Simple_repeat 1 96 0 305 178 22 56 chr2 42497112 42497202 -208190652 + L1MCa LINE L1 1995 2081 -4345 596 256 6 37 chr2 42497246 42497410 -208190444 - MER58B DNA MER1_type -6 335 177 185 354 61 20 chr2 42497611 42497710 -208190144 - L2 LINE L2 0 3313 3211 246 54 0 0 chr2 42497737 42497774 -208190080 + L1MA3 LINE L1 6269 6305 0 486 290 70 38 chr2 42497885 42498195 -208189659 + MLT1H LTR MaLR 1 364 -185 228 143 0 0 chr2 42498428 42498470 -208189384 + (TG)n Simple_repeat Simple_repeat 1 42 0 194 0 0 37 chr2 42499555 42499582 -208188272 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 250 291 100 9 chr2 42499630 42499740 -208188114 - MLT1H LTR MaLR -98 457 338 757 230 13 39 chr2 42499780 42500010 -208187844 - MLT1H LTR MaLR -305 244 21 307 252 78 26 chr2 42500214 42500329 -208187525 - MER103 DNA DNA -20 146 26 522 273 26 7 chr2 42501836 42501990 -208185864 + L1MEc LINE L1 107 263 -6133 561 292 71 40 chr2 42502042 42502268 -208185586 + L1MEc LINE L1 361 593 -5803 5275 227 84 53 chr2 42502285 42504614 -208183240 + L1MDa LINE L1 48 2650 -3890 1515 217 25 6 chr2 42504661 42504975 -208182879 + MER2 DNA MER2_type 3 322 -23 2901 281 41 34 chr2 42505148 42506182 -208181672 + L1MEc LINE L1 599 1649 -4747 1302 184 0 93 chr2 42506182 42506525 -208181329 + AluY SINE Alu 1 311 0 2901 281 41 34 chr2 42506525 42506919 -208180935 + L1MEc LINE L1 1649 2038 -4358 500 265 4 80 chr2 42506897 42507135 -208180719 + L1ME1 LINE L1 5947 6166 -69 * 546 382 4 4 chr2 42507208 42507433 -208180421 - MIR SINE MIR -18 244 20 248 325 85 58 chr2 42508644 42508832 -208179022 - L2 LINE L2 0 3272 3080 292 351 17 17 chr2 42509158 42509332 -208178522 - MARNA DNA Mariner -281 305 132 450 0 0 0 chr2 42509857 42509907 -208177947 + (CA)n Simple_repeat Simple_repeat 1 50 0 788 303 34 43 chr2 42510926 42511533 -208176321 + L1MEc LINE L1 2082 2647 -3568 594 41 0 0 chr2 42513635 42513708 -208174146 + (TA)n Simple_repeat Simple_repeat 1 73 0 208 312 14 80 chr2 42514772 42514910 -208172944 + MIR SINE MIR 41 169 -93 315 0 0 0 chr2 42516587 42516622 -208171232 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 42516632 42516654 -208171200 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 42516710 42516742 -208171112 + AT_rich Low_complexity Low_complexity 1 32 0 1512 219 70 38 chr2 42516858 42517328 -208170526 - MLT1D LTR MaLR 0 505 21 24 0 0 0 chr2 42517547 42517571 -208170283 + AT_rich Low_complexity Low_complexity 1 24 0 215 261 67 126 chr2 42517903 42518022 -208169832 - MIR SINE MIR -57 151 40 19424 83 2 5 chr2 42518118 42520819 -208167035 - L1PA6 LINE L1 -2101 4045 1353 10619 61 6 0 chr2 42520820 42522947 -208164907 + L1PA6 LINE L1 4018 6151 -3 296 298 114 32 chr2 42523269 42523427 -208164427 + MIR SINE MIR 19 189 -73 1835 114 8 0 chr2 42523535 42523798 -208164056 - AluSp SINE Alu -4 309 45 261 0 0 0 chr2 42524549 42524578 -208163276 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr2 42524991 42525021 -208162833 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 42525263 42525284 -208162570 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr2 42525422 42525449 -208162405 + (TG)n Simple_repeat Simple_repeat 2 28 0 2086 143 53 6 chr2 42525449 42525791 -208162063 - THE1B LTR MaLR -3 361 4 10443 110 12 12 chr2 42525805 42527319 -208160535 - THE1B-int LTR MaLR -66 1514 1 2340 127 31 6 chr2 42527319 42527673 -208160181 - THE1B LTR MaLR 0 364 2 222 37 0 0 chr2 42527677 42527704 -208160150 + (TG)n Simple_repeat Simple_repeat 2 28 0 201 192 14 41 chr2 42527722 42527795 -208160059 + GA-rich Low_complexity Low_complexity 3 73 0 194 299 51 43 chr2 42528139 42528256 -208159598 - L3 LINE CR1 -830 747 630 189 367 42 17 chr2 42528496 42528616 -208159238 - L2 LINE L2 -228 3044 2922 541 116 11 0 chr2 42529419 42529514 -208158340 + L1MA4 LINE L1 6196 6291 -9 23 0 0 0 chr2 42529891 42529914 -208157940 + AT_rich Low_complexity Low_complexity 1 23 0 357 82 0 0 chr2 42531308 42531357 -208156497 + (TTCA)n Simple_repeat Simple_repeat 2 50 0 964 160 0 0 chr2 42531357 42531507 -208156347 - AluSg/x SINE Alu -30 282 133 2262 100 0 3 chr2 42531508 42531808 -208156046 - AluSq SINE Alu -12 301 3 2330 60 0 10 chr2 42531906 42532206 -208155648 + AluY SINE Alu 1 297 -14 5702 148 40 3 chr2 42532443 42533660 -208154194 - L1PA13 LINE L1 0 6163 4885 3755 177 7 6 chr2 42533657 42534373 -208153481 + L1PA13 LINE L1 4136 4852 -1294 * 529 306 197 0 chr2 42534611 42534804 -208153050 + MIR SINE MIR 12 242 -20 1085 199 0 0 chr2 42536237 42536433 -208151421 + AluJo SINE Alu 102 297 -15 210 128 0 0 chr2 42536690 42536729 -208151125 + (A)n Simple_repeat Simple_repeat 1 39 0 1835 167 102 39 chr2 42537027 42537488 -208150366 - LTR2B LTR ERV1 0 490 1 375 294 162 0 chr2 42539195 42539331 -208148523 + MIR SINE MIR 31 188 -74 436 396 57 8 chr2 42540369 42540634 -208147220 - L2 LINE L2 0 3272 2995 506 17 0 0 chr2 42540848 42540940 -208146914 + L1PA4 LINE L1 6087 6178 0 260 259 74 0 chr2 42540973 42541081 -208146773 - L1MC4 LINE L1 -3 8039 7924 2182 244 44 64 chr2 42541263 42541698 -208146156 - L1ME2 LINE L1 -1 6163 5754 2354 147 75 0 chr2 42541698 42542100 -208145754 - MSTB1 LTR MaLR 0 432 1 2182 244 44 64 chr2 42542100 42542564 -208145290 - L1ME2 LINE L1 -410 5754 5282 1853 253 70 12 chr2 42542568 42543302 -208144552 - L1ME2 LINE L1 -920 5226 4451 920 220 65 79 chr2 42543308 42543430 -208144424 + MLT1A2 LTR MaLR 8 130 -244 315 23 23 0 chr2 42543430 42543474 -208144380 - L1PA4 LINE L1 -3 6152 6108 920 220 65 79 chr2 42543474 42543719 -208144135 + MLT1A2 LTR MaLR 130 370 -4 285 249 56 76 chr2 42543724 42543921 -208143933 - L1ME2 LINE L1 -1691 4455 4263 1126 280 129 25 chr2 42543943 42544233 -208143621 - MLT1G1 LTR MaLR -32 563 305 306 0 0 0 chr2 42544233 42544267 -208143587 + (GA)n Simple_repeat Simple_repeat 1 34 0 1126 280 129 25 chr2 42544267 42544486 -208143368 - MLT1G1 LTR MaLR -290 305 1 1547 266 104 35 chr2 42544486 42544592 -208143262 - L1ME2 LINE L1 -1876 4270 4173 2395 65 7 0 chr2 42544592 42544901 -208142953 - AluY SINE Alu 0 311 1 1547 266 104 35 chr2 42544901 42545575 -208142279 - L1ME2 LINE L1 -1973 4173 3436 252 198 81 23 chr2 42545634 42545720 -208142134 - L1ME2 LINE L1 -2859 3287 3197 403 244 13 0 chr2 42547019 42547097 -208140757 - AluJ/FLAM SINE Alu -223 79 1 23 33 0 0 chr2 42547105 42547135 -208140719 + AT_rich Low_complexity Low_complexity 1 30 0 314 297 109 63 chr2 42547168 42547407 -208140447 + MIR SINE MIR 13 262 0 2156 77 7 20 chr2 42547794 42548094 -208139760 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 42549039 42549062 -208138792 + AT_rich Low_complexity Low_complexity 1 23 0 278 321 83 42 chr2 42549724 42549892 -208137962 + MIR3 SINE MIR 9 183 -25 1022 107 0 0 chr2 42550162 42550311 -208137543 - AluSg/x SINE Alu -5 307 159 2244 110 10 0 chr2 42551097 42551406 -208136448 - AluSx SINE Alu 0 312 1 2506 188 93 31 chr2 42551441 42551531 -208136323 - L1MC3 LINE L1 -7 7778 7695 378 175 62 0 chr2 42551531 42551628 -208136226 - L1PA8 LINE L1 0 6172 6070 2506 188 93 31 chr2 42551628 42552148 -208135706 - L1MC3 LINE L1 -90 7695 7130 2292 100 0 3 chr2 42552381 42552691 -208135163 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr2 42553042 42553063 -208134791 + AT_rich Low_complexity Low_complexity 1 21 0 1653 132 18 7 chr2 42553575 42553855 -208133999 + L1MA5 LINE L1 6012 6294 -6 237 204 10 112 chr2 42553919 42554017 -208133837 + L2 LINE L2 3225 3312 -1 2289 47 50 7 chr2 42555172 42555469 -208132385 + AluY SINE Alu 1 310 -1 2928 248 87 21 chr2 42556485 42558011 -208129843 + L1ME1 LINE L1 4299 5960 -206 2382 79 0 16 chr2 42558011 42558327 -208129527 + AluY SINE Alu 1 311 0 2928 248 87 21 chr2 42558327 42558542 -208129312 + L1ME1 LINE L1 5960 6159 -7 291 352 52 5 chr2 42558636 42558849 -208129005 - L1ME LINE L1 -323 5798 5576 183 139 0 0 chr2 42559633 42559669 -208128185 + (TG)n Simple_repeat Simple_repeat 2 37 0 370 223 21 0 chr2 42561412 42561506 -208126348 - MER58 DNA MER1_type -6 2414 2319 344 261 11 0 chr2 42561526 42561614 -208126240 - MER58 DNA MER1_type -124 91 3 1681 192 7 3 chr2 42561749 42562041 -208125813 - AluJb SINE Alu -19 293 1 39 50 0 0 chr2 42564513 42564573 -208123281 + AT_rich Low_complexity Low_complexity 1 60 0 462 293 102 0 chr2 42564730 42564877 -208122977 - MIR SINE MIR -59 203 42 2136 218 32 16 chr2 42564878 42565403 -208122451 - L1MC4 LINE L1 -4 8038 7441 482 332 150 31 chr2 42565431 42566051 -208121803 + L2 LINE L2 2005 2698 -616 390 256 74 41 chr2 42566126 42566247 -208121607 - L2 LINE L2 0 3272 3148 * 535 270 154 35 chr2 42566243 42566502 -208121352 + L2 LINE L2 3024 3313 0 315 369 88 23 chr2 42566504 42566764 -208121090 - L2 LINE L2 -116 3197 2921 278 345 28 21 chr2 42567282 42567424 -208120430 + L3 LINE CR1 1431 1573 -4 2232 67 3 3 chr2 42569012 42569318 -208118536 - AluY SINE Alu 0 306 1 190 328 17 17 chr2 42569797 42569855 -208117999 - MIR SINE MIR -160 102 45 218 224 60 15 chr2 42570210 42570277 -208117577 - MER5C DNA MER1_type -254 70 1 * 231 191 43 0 chr2 42570277 42570323 -208117531 + MER5A DNA MER1_type 71 118 -71 213 325 121 0 chr2 42570599 42570682 -208117172 - MIR SINE MIR -111 151 59 324 274 104 47 chr2 42572175 42572361 -208115493 - MIR SINE MIR -66 196 3 1227 237 38 38 chr2 42573907 42574333 -208113521 + L1M4 LINE L1 2698 3123 -3023 575 219 39 28 chr2 42574335 42574513 -208113341 - MLT1C LTR MaLR -140 327 148 394 352 59 12 chr2 42576204 42576361 -208111493 - L1ME LINE L1 -303 5818 5670 1859 149 3 37 chr2 42576361 42576684 -208111170 - AluSx SINE Alu 0 312 1 394 352 59 12 chr2 42576684 42576847 -208111007 - L1ME LINE L1 -451 5670 5483 227 326 12 0 chr2 42577217 42577303 -208110551 - MIR SINE MIR 0 262 176 394 336 38 0 chr2 42577860 42577991 -208109863 - MIR SINE MIR -119 143 8 1997 126 14 3 chr2 42578099 42578392 -208109462 - AluSg SINE Alu -14 296 1 2141 119 36 25 chr2 42578507 42578867 -208108987 + THE1B LTR MaLR 1 364 0 11329 103 1 6 chr2 42578867 42580455 -208107399 + THE1B-int LTR MaLR 1 1580 0 2244 110 48 25 chr2 42580455 42580811 -208107043 + THE1B LTR MaLR 1 364 0 230 258 0 30 chr2 42580884 42580950 -208106904 - MIR SINE MIR -46 216 153 369 238 56 148 chr2 42582399 42582723 -208105131 + MLT1H LTR MaLR 98 384 -25 639 113 0 57 chr2 42583349 42583473 -208104381 - L1MA8 LINE L1 -5 6286 6170 810 296 46 35 chr2 42583687 42584119 -208103735 + L1ME1 LINE L1 26 462 -5961 957 303 105 22 chr2 42584425 42585109 -208102745 + L1ME1 LINE L1 795 1592 -5349 3669 126 26 38 chr2 42585109 42585770 -208102084 - MER39B LTR ERV1 0 653 1 957 303 105 22 chr2 42585770 42586085 -208101769 + L1ME1 LINE L1 1592 1880 -5061 478 250 94 23 chr2 42586084 42586392 -208101462 + L1ME1 LINE L1 3964 4293 -2648 * 200 100 25 0 chr2 42586436 42586476 -208101378 + (TA)n Simple_repeat Simple_repeat 1 41 0 368 303 32 60 chr2 42586807 42586877 -208100977 - L1ME LINE L1 -392 5729 5659 2167 108 0 29 chr2 42586877 42587184 -208100670 - AluSp SINE Alu -15 298 1 368 303 32 60 chr2 42587184 42587331 -208100523 - L1ME LINE L1 -462 5659 5518 735 123 9 0 chr2 42587335 42587449 -208100405 + Ricksha DNA DNA 1 115 -1066 481 169 12 0 chr2 42587456 42587539 -208100315 + Ricksha DNA DNA 2853 2936 -315 254 151 0 38 chr2 42587546 42587599 -208100255 - L1PA16 LINE L1 -9 6157 6107 399 238 101 21 chr2 42587601 42587790 -208100064 + L1ME1 LINE L1 4341 4544 -2397 872 111 37 58 chr2 42587812 42588001 -208099853 - L1MA7 LINE L1 -151 6140 5956 1070 282 92 21 chr2 42588002 42588424 -208099430 - ERVL-B1 LTR ERVL -5311 453 2 1626 233 39 64 chr2 42588425 42588958 -208098896 - MLT2B1 LTR ERVL 0 520 1 318 241 11 0 chr2 42588958 42589045 -208098809 + L1ME1 LINE L1 5021 5108 -1833 * 1732 261 87 44 chr2 42589040 42590281 -208097573 + L1ME1 LINE L1 5607 6911 -50 1977 157 27 0 chr2 42590934 42591272 -208096582 + MER7A DNA MER2_type 2 346 0 225 108 0 0 chr2 42591780 42591817 -208096037 + (A)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr2 42592047 42592068 -208095786 + AT_rich Low_complexity Low_complexity 1 21 0 8240 134 22 4 chr2 42592370 42593632 -208094222 + Tigger1 DNA MER2_type 26 1310 -1108 7247 40 0 0 chr2 42593644 42594707 -208093147 - L1PA4 LINE L1 -3 6152 5086 13842 33 0 0 chr2 42594707 42596363 -208091491 + L1PA4 LINE L1 3427 5082 -1064 6344 154 29 4 chr2 42596363 42597458 -208090396 + Tigger1 DNA MER2_type 1295 2417 -1 234 286 191 42 chr2 42597544 42597712 -208090142 - LTR50 LTR ERVL -498 297 105 1041 217 188 5 chr2 42597738 42598106 -208089748 + MER63B DNA MER1_type 2 436 0 259 230 54 0 chr2 42598108 42598182 -208089672 - LTR50 LTR ERVL -717 78 1 1143 307 89 35 chr2 42598839 42599126 -208088728 - ERVL LTR ERVL -743 5021 4751 1977 202 33 76 chr2 42599126 42599705 -208088149 - MLT2B3 LTR ERVL 0 554 1 1143 307 89 35 chr2 42599705 42599968 -208087886 - ERVL LTR ERVL -1013 4751 4441 555 244 81 35 chr2 42600016 42600213 -208087641 + L1MA10 LINE L1 6111 6316 -18 302 240 170 10 chr2 42600241 42600341 -208087513 - LTR50 LTR ERVL -592 203 88 598 346 107 54 chr2 42600488 42601253 -208086601 - L2 LINE L2 -21 3251 2432 649 307 158 37 chr2 42601666 42602122 -208085732 + LTR33 LTR ERVL 1 511 -10 868 257 28 9 chr2 42602221 42602439 -208085415 - MER58A DNA MER1_type -2 222 1 23 0 0 0 chr2 42602909 42602932 -208084922 + AT_rich Low_complexity Low_complexity 1 23 0 385 285 114 14 chr2 42603765 42603918 -208083936 - MIR SINE MIR -58 204 37 27 29 0 0 chr2 42604179 42604213 -208083641 + AT_rich Low_complexity Low_complexity 1 34 0 449 303 107 30 chr2 42604255 42604489 -208083365 - MIR SINE MIR -4 258 7 678 334 126 12 chr2 42605127 42605672 -208082182 + L2 LINE L2 2646 3251 -62 180 0 0 0 chr2 42605975 42605995 -208081859 + (GAA)n Simple_repeat Simple_repeat 3 22 0 231 185 0 37 chr2 42606116 42606197 -208081657 + GA-rich Low_complexity Low_complexity 3 80 0 431 295 195 9 chr2 42607203 42607413 -208080441 - MIR SINE MIR 0 262 14 210 71 0 0 chr2 42608151 42608179 -208079675 + (A)n Simple_repeat Simple_repeat 1 28 0 321 320 29 10 chr2 42608302 42608405 -208079449 + MLT1J LTR MaLR 240 344 -167 302 365 76 14 chr2 42609422 42609633 -208078221 - HAL1b LINE L1 -443 905 682 279 353 65 5 chr2 42610900 42611076 -208076778 - MIR3 SINE MIR -32 176 21 36 23 0 0 chr2 42611116 42611159 -208076695 + AT_rich Low_complexity Low_complexity 1 43 0 2087 191 54 92 chr2 42611489 42612140 -208075714 - MLT1E2 LTR MaLR 0 626 1 5795 146 7 32 chr2 42612782 42614130 -208073724 - L1PA16 LINE L1 -9 6157 4842 2465 81 0 0 chr2 42615531 42615840 -208072014 + AluY SINE Alu 1 309 -2 21 89 0 0 chr2 42617188 42617244 -208070610 + AT_rich Low_complexity Low_complexity 1 56 0 3246 161 65 3 chr2 42617411 42618008 -208069846 + L1PA16 LINE L1 5524 6157 -9 999 292 86 28 chr2 42618280 42618712 -208069142 + MLT1C LTR MaLR 6 462 -5 183 80 0 0 chr2 42618733 42618758 -208069096 + (T)n Simple_repeat Simple_repeat 1 25 0 1727 179 15 80 chr2 42618760 42619162 -208068692 - MLT1B LTR MaLR 0 390 15 703 142 0 13 chr2 42619174 42619329 -208068525 + (TCCC)n Simple_repeat Simple_repeat 3 155 0 272 342 26 53 chr2 42619829 42619981 -208067873 - MLT1K LTR MaLR -433 155 8 350 341 7 30 chr2 42620229 42620364 -208067490 + MIR3 SINE MIR 72 203 -5 182 170 0 43 chr2 42620653 42620700 -208067154 + (CATA)n Simple_repeat Simple_repeat 3 47 0 22 35 0 0 chr2 42621481 42621510 -208066344 + AT_rich Low_complexity Low_complexity 1 29 0 210 71 0 0 chr2 42622024 42622052 -208065802 + (GA)n Simple_repeat Simple_repeat 2 29 0 1237 275 96 54 chr2 42622576 42623129 -208064725 + L2 LINE L2 1837 2412 -902 301 280 64 55 chr2 42623217 42623453 -208064401 + L1MEc LINE L1 1714 1951 -4445 26 0 0 0 chr2 42623525 42623551 -208064303 + AT_rich Low_complexity Low_complexity 1 26 0 1885 138 7 0 chr2 42623551 42623827 -208064027 - AluY SINE Alu -33 278 1 25 31 0 0 chr2 42626506 42626538 -208061316 + AT_rich Low_complexity Low_complexity 1 32 0 1753 298 24 11 chr2 42626624 42627183 -208060671 + L1M3a LINE L1 2 743 -5212 6675 247 61 32 chr2 42627267 42628277 -208059577 + L1M3a LINE L1 318 1297 -4737 1398 218 0 35 chr2 42628277 42628593 -208059261 + AluJo SINE Alu 1 305 -7 6675 247 61 32 chr2 42628593 42629416 -208058438 + L1M3a LINE L1 1297 2095 -3939 1129 43 0 0 chr2 42629416 42629556 -208058298 + L1PA8 LINE L1 6027 6166 -6 6675 247 61 32 chr2 42629556 42630468 -208057386 + L1M3a LINE L1 2095 2886 -3148 1761 142 71 0 chr2 42630468 42630736 -208057118 - AluSx SINE Alu -25 287 1 6675 247 61 32 chr2 42630736 42631695 -208056159 + L1M3a LINE L1 2886 3816 -2218 1470 212 139 42 chr2 42631692 42631995 -208055859 - L1M3 LINE L1 -402 6276 6004 * 2465 114 3 16 chr2 42631995 42632364 -208055490 + THE1B LTR MaLR 1 364 0 1470 212 139 42 chr2 42632364 42632484 -208055370 - L1M3 LINE L1 -674 6004 5897 1876 124 0 0 chr2 42632484 42632750 -208055104 - AluSx SINE Alu -13 299 34 357 219 189 6 chr2 42632750 42632914 -208054940 - L1M3 LINE L1 -4154 2492 2299 2962 242 78 80 chr2 42632931 42633870 -208053984 - L1M3 LINE L1 -4465 2181 1242 1638 201 17 0 chr2 42633870 42634164 -208053690 - AluJb SINE Alu -11 301 3 2962 242 78 80 chr2 42634164 42635301 -208052553 - L1M3 LINE L1 -5404 1242 72 370 210 84 28 chr2 42635396 42635539 -208052315 - L1MEc LINE L1 -2822 3393 3243 * 966 172 45 11 chr2 42635534 42635874 -208051980 - L1MEc LINE L1 -814 5594 1793 5182 165 32 8 chr2 42635892 42636893 -208050961 - L1MA4 LINE L1 -22 6278 5254 10769 195 45 10 chr2 42636894 42639317 -208048537 + L1MA4 LINE L1 2724 5232 -914 511 284 37 61 chr2 42639311 42639677 -208048177 - L1MEc LINE L1 -4730 1666 1148 * 33 0 0 0 chr2 42639696 42639729 -208048125 + AT_rich Low_complexity Low_complexity 1 33 0 1385 260 89 50 chr2 42639936 42640032 -208047822 - L1MEc LINE L1 -5229 1167 1076 2140 128 3 0 chr2 42640032 42640338 -208047516 - AluSg SINE Alu -3 307 1 1385 260 89 50 chr2 42640338 42640738 -208047116 - L1MEc LINE L1 -5320 1076 693 872 264 14 0 chr2 42640738 42640954 -208046900 - MER20 DNA MER1_type 0 219 1 1385 260 89 50 chr2 42640954 42641498 -208046356 - L1MEc LINE L1 -5703 693 45 330 325 8 8 chr2 42641678 42641795 -208046059 - L2 LINE L2 -1068 2246 2130 10257 118 5 1 chr2 42642451 42644786 -208043068 - L1PA8A LINE L1 -1 6130 3810 1172 111 19 87 chr2 42644786 42644993 -208042861 + L1P3 LINE L1 12 204 -5671 6191 156 8 30 chr2 42645037 42646816 -208041038 - L1P3 LINE L1 -3832 2629 517 2183 125 3 0 chr2 42646816 42647127 -208040727 - AluSx SINE Alu 0 312 1 6191 156 8 30 chr2 42647127 42647412 -208040442 - L1P3 LINE L1 -5944 517 227 1073 186 27 9 chr2 42647605 42647825 -208040029 - L1MC1 LINE L1 0 6333 6110 26 0 0 0 chr2 42648156 42648182 -208039672 + AT_rich Low_complexity Low_complexity 1 26 0 207 204 0 0 chr2 42648519 42648568 -208039286 + (CA)n Simple_repeat Simple_repeat 1 49 0 428 310 132 50 chr2 42648704 42649023 -208038831 - L2 LINE L2 -799 2515 2171 760 195 72 81 chr2 42649700 42649739 -208038115 + MER20 DNA MER1_type 1 39 -180 739 193 44 6 chr2 42649739 42649920 -208037934 - MER53 DNA DNA 0 189 2 760 195 72 81 chr2 42649920 42650101 -208037753 + MER20 DNA MER1_type 39 219 0 22 0 0 0 chr2 42650617 42650639 -208037215 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 42651439 42651461 -208036393 + AT_rich Low_complexity Low_complexity 1 22 0 2145 254 74 11 chr2 42651509 42652033 -208035821 - MLT1F1 LTR MaLR 0 567 11 253 195 13 26 chr2 42652215 42652292 -208035562 + GA-rich Low_complexity Low_complexity 4 79 0 295 333 50 44 chr2 42652293 42652473 -208035381 - L2 LINE L2 -411 2903 2723 5853 156 14 11 chr2 42652542 42654183 -208033671 + L1PB2 LINE L1 4151 5784 -367 393 22 0 0 chr2 42654183 42654229 -208033625 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 288 0 0 0 chr2 42654228 42654260 -208033594 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 5853 156 14 11 chr2 42654229 42654619 -208033235 + L1PB2 LINE L1 5784 6150 -1 360 0 0 0 chr2 42654771 42654811 -208033043 + (TTA)n Simple_repeat Simple_repeat 3 42 0 285 306 25 87 chr2 42654832 42655028 -208032826 - L2 LINE L2 -769 2545 2362 679 279 53 4 chr2 42656643 42656869 -208030985 + MIR SINE MIR 12 248 -14 311 207 42 22 chr2 42657245 42657337 -208030517 + MLT1F LTR MaLR 436 526 -16 242 388 77 6 chr2 42657735 42657918 -208029936 + L3b LINE CR1 1388 1583 0 29 47 0 0 chr2 42657978 42658021 -208029833 + AT_rich Low_complexity Low_complexity 1 43 0 296 175 41 0 chr2 42658039 42658136 -208029718 + (TA)n Simple_repeat Simple_repeat 2 102 0 4820 140 56 29 chr2 42658365 42658397 -208029457 + L1MA6 LINE L1 5174 5204 -1096 4042 61 72 34 chr2 42658397 42658983 -208028871 - LTR14B LTR ERVK 0 608 1 4820 140 56 29 chr2 42658983 42660006 -208027848 + L1MA6 LINE L1 5204 6254 -46 343 241 106 14 chr2 42660014 42660155 -208027699 + L1M4 LINE L1 2217 2370 -3776 201 356 19 3 chr2 42660481 42660591 -208027263 - MIR SINE MIR -64 144 33 299 155 0 17 chr2 42660650 42660708 -208027146 - MLT1E3 LTR MaLR -2 622 566 276 30 0 0 chr2 42660711 42660744 -208027110 + (TG)n Simple_repeat Simple_repeat 2 34 0 217 329 72 13 chr2 42660947 42661099 -208026755 - L2 LINE L2 -908 2406 2246 273 254 99 0 chr2 42661187 42661258 -208026596 + MIR SINE MIR 11 88 -174 479 222 82 15 chr2 42661284 42661419 -208026435 + L2 LINE L2 1176 1319 -1995 1323 283 79 135 chr2 42661583 42663208 -208024646 + L2 LINE L2 1790 3309 -4 224 326 7 96 chr2 42663339 42663474 -208024380 + MIR3 SINE MIR 40 162 -46 215 190 17 0 chr2 42664059 42664117 -208023737 + (CA)n Simple_repeat Simple_repeat 2 60 0 225 175 0 0 chr2 42665289 42665329 -208022525 + GA-rich Low_complexity Low_complexity 1 40 0 261 353 39 10 chr2 42665667 42665769 -208022085 + MIR SINE MIR 1 105 -157 22 0 0 0 chr2 42666041 42666063 -208021791 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 42667854 42667885 -208019969 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr2 42667905 42667933 -208019921 + AT_rich Low_complexity Low_complexity 1 28 0 407 211 39 10 chr2 42670270 42670374 -208017480 - L1ME4a LINE L1 -46 6075 5969 236 224 15 0 chr2 42671421 42671488 -208016366 + (TA)n Simple_repeat Simple_repeat 2 69 0 251 402 16 0 chr2 42671588 42671710 -208016144 + L2 LINE L2 3149 3272 0 326 301 96 29 chr2 42671728 42671884 -208015970 - MIR SINE MIR -64 144 34 2324 147 52 2 chr2 42672005 42672413 -208015441 + MSTA LTR MaLR 1 428 0 289 326 23 16 chr2 42672481 42672610 -208015244 - MLT1L LTR MaLR -292 323 194 2412 108 0 3 chr2 42672639 42672983 -208014871 - L1PA14 LINE L1 -128 6033 5691 197 329 53 0 chr2 42673356 42673432 -208014422 - L2 LINE L2 -86 3227 3148 246 32 0 0 chr2 42673944 42673975 -208013879 + (TG)n Simple_repeat Simple_repeat 2 32 0 187 386 31 8 chr2 42674944 42675071 -208012783 + MER5B DNA MER1_type 25 154 -24 204 299 28 47 chr2 42675091 42675198 -208012656 - MER5A DNA MER1_type -45 144 40 204 143 0 0 chr2 42675946 42675988 -208011866 + (TA)n Simple_repeat Simple_repeat 2 43 0 422 208 0 123 chr2 42676073 42676203 -208011651 + MER81 DNA DNA 1 114 0 285 347 40 55 chr2 42676267 42676593 -208011261 + MLT1K LTR MaLR 182 502 -86 267 301 0 0 chr2 42676646 42676719 -208011135 + MIR SINE MIR 81 153 -109 250 179 194 30 chr2 42676764 42676831 -208011023 - L2 LINE L2 -1 3312 3235 185 217 43 22 chr2 42677339 42677385 -208010469 + L3 LINE CR1 443 489 -1088 267 31 0 0 chr2 42677493 42677525 -208010329 + (TG)n Simple_repeat Simple_repeat 1 32 0 511 249 127 77 chr2 42678532 42678910 -208008944 + HAL1b LINE L1 331 727 -621 471 74 62 25 chr2 42679074 42679155 -208008699 - L1PA13 LINE L1 0 6163 6080 343 265 75 118 chr2 42679340 42679450 -208008404 + HAL1b LINE L1 985 1098 -250 512 89 0 25 chr2 42679450 42679529 -208008325 - L1PA13 LINE L1 -2 6161 6085 343 265 75 118 chr2 42679529 42679791 -208008063 + HAL1b LINE L1 1098 1341 -7 317 283 0 67 chr2 42680584 42680704 -208007150 - MIR SINE MIR -119 143 32 220 380 14 56 chr2 42682109 42682251 -208005603 - L2 LINE L2 0 3272 3137 35 0 0 0 chr2 42683910 42683945 -208003909 + AT_rich Low_complexity Low_complexity 1 35 0 225 94 0 0 chr2 42684245 42684277 -208003577 + (TC)n Simple_repeat Simple_repeat 1 32 0 354 61 0 0 chr2 42684277 42684326 -208003528 + (TG)n Simple_repeat Simple_repeat 2 50 0 236 327 206 22 chr2 42685073 42685437 -208002417 - L2 LINE L2 -1074 2240 1810 1301 268 100 5 chr2 42685787 42686156 -208001698 + LTR16C LTR ERVL 88 491 0 251 330 48 73 chr2 42686167 42686373 -208001481 - MIR SINE MIR -47 215 15 3851 136 43 18 chr2 42686513 42687189 -208000665 + L1PA16 LINE L1 5465 6157 -9 1578 224 36 58 chr2 42687739 42688261 -207999593 - L1 LINE L1 -1912 4234 3724 1641 166 163 17 chr2 42688268 42688629 -207999225 - MSTA LTR MaLR -14 414 1 663 211 0 6 chr2 42688660 42688821 -207999033 - L1M4c LINE L1 -5151 1233 1074 319 228 25 0 chr2 42688955 42689034 -207998820 + MER5A DNA MER1_type 29 109 -80 8689 151 16 1 chr2 42689549 42691919 -207995935 + L1PA11 LINE L1 3781 6174 0 188 294 65 54 chr2 42692844 42692936 -207994918 + MER5B DNA MER1_type 84 176 -2 524 124 9 26 chr2 42693175 42693288 -207994566 + (TTC)n Simple_repeat Simple_repeat 1 111 0 1897 150 10 22 chr2 42693296 42693610 -207994244 - AluSx SINE Alu -2 310 1 224 348 31 11 chr2 42694194 42694292 -207993562 - MIR SINE MIR -91 117 42 1690 156 32 3 chr2 42694704 42695026 -207992828 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 42695229 42695250 -207992604 + AT_rich Low_complexity Low_complexity 1 21 0 212 364 11 0 chr2 42695453 42695541 -207992313 + MIR SINE MIR 52 140 -122 408 40 0 0 chr2 42695574 42695624 -207992230 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 25 31 0 0 chr2 42695980 42696012 -207991842 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 42696012 42696034 -207991820 + (TCTCCC)n Simple_repeat Simple_repeat 4 25 0 459 290 103 50 chr2 42696282 42696641 -207991213 - L1M4 LINE L1 -1481 4665 4288 803 264 67 0 chr2 42696738 42697056 -207990798 + L1ME2 LINE L1 5537 5830 -334 265 220 0 17 chr2 42698264 42698323 -207989531 - MLT1-int LTR MaLR -1309 62 5 1611 237 44 50 chr2 42698893 42699437 -207988417 - LTR55 LTR ERV -7 541 1 273 297 27 45 chr2 42699521 42699584 -207988270 + MIR3 SINE MIR 92 154 -54 1137 233 5 0 chr2 42699584 42699807 -207988047 + MER58A DNA MER1_type 1 224 0 273 297 27 45 chr2 42699807 42699854 -207988000 + MIR3 SINE MIR 154 200 -8 25 0 0 0 chr2 42700560 42700585 -207987269 + AT_rich Low_complexity Low_complexity 1 25 0 191 335 46 64 chr2 42701005 42701178 -207986676 - MIR SINE MIR -64 198 29 804 186 0 0 chr2 42702382 42702511 -207985343 - FLAM_C SINE Alu -4 129 1 236 401 103 8 chr2 42702594 42702993 -207984861 + LTR67 LTR ERVL 36 472 -85 322 309 41 0 chr2 42704162 42704259 -207983595 - L3 LINE CR1 -1 1576 1476 653 197 8 8 chr2 42704641 42704768 -207983086 + FRAM SINE Alu 1 127 -49 26 50 0 0 chr2 42704768 42704808 -207983046 + AT_rich Low_complexity Low_complexity 1 40 0 918 120 0 0 chr2 42705023 42705156 -207982698 + THE1B LTR MaLR 232 364 0 1007 283 177 15 chr2 42705337 42706351 -207981503 + L1MEc LINE L1 1835 3000 -3215 276 146 18 0 chr2 42706521 42706576 -207981278 + L1MA6 LINE L1 6245 6300 0 405 255 176 20 chr2 42706926 42707079 -207980775 - MER5A DNA MER1_type -6 183 7 1662 224 37 67 chr2 42708538 42709046 -207978808 + MLT1D LTR MaLR 1 493 -12 2216 95 7 0 chr2 42709528 42709823 -207978031 + AluY SINE Alu 1 297 -14 21 0 0 0 chr2 42710396 42710417 -207977437 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 42710678 42710701 -207977153 + AT_rich Low_complexity Low_complexity 1 23 0 2781 10 0 0 chr2 42710762 42711067 -207976787 + AluYa5 SINE Alu 1 305 -6 234 362 0 0 chr2 42711586 42711691 -207976163 + (CCA)n Simple_repeat Simple_repeat 1 105 0 24 0 0 0 chr2 42712700 42712724 -207975130 + AT_rich Low_complexity Low_complexity 1 24 0 224 284 23 11 chr2 42712867 42712955 -207974899 + (CATA)n Simple_repeat Simple_repeat 4 92 0 28 79 0 0 chr2 42713051 42713114 -207974740 + AT_rich Low_complexity Low_complexity 1 63 0 489 239 123 0 chr2 42713551 42713681 -207974173 + L2 LINE L2 2315 2460 -854 828 47 19 0 chr2 42713682 42713789 -207974065 - L1PA4 LINE L1 -201 5954 5846 1673 25 10 0 chr2 42713789 42713987 -207973867 + L1PA4 LINE L1 5948 6153 -2 731 264 238 17 chr2 42713987 42714678 -207973176 + L2 LINE L2 2451 3313 0 252 325 26 51 chr2 42714651 42714768 -207973086 - L2 LINE L2 -11 3261 3148 * 311 267 0 13 chr2 42714783 42714858 -207972996 - MIR3 SINE MIR -21 187 114 497 274 26 0 chr2 42715092 42715205 -207972649 + FLAM_A SINE Alu 1 116 -17 1916 123 0 0 chr2 42715710 42715979 -207971875 + AluSq SINE Alu 45 313 0 679 271 102 36 chr2 42716037 42716369 -207971485 + L3 LINE CR1 427 780 -797 585 288 109 48 chr2 42716617 42716947 -207970907 + L3 LINE CR1 800 1149 -428 1763 169 14 0 chr2 42718507 42718797 -207969057 + AluSx SINE Alu 1 294 -18 183 304 72 0 chr2 42719450 42719519 -207968335 - L2 LINE L2 -802 2512 2439 875 294 50 31 chr2 42719532 42720168 -207967686 + L1M4 LINE L1 4698 5345 -801 505 364 37 12 chr2 42720456 42720698 -207967156 - MIR SINE MIR -14 248 1 181 286 41 0 chr2 42722385 42722434 -207965420 - MIR SINE MIR -67 141 91 949 69 8 15 chr2 42724040 42724170 -207963684 + AluY SINE Alu 166 294 -17 303 71 0 0 chr2 42724298 42724340 -207963514 - L1PA13 LINE L1 -367 5798 5757 2206 105 28 25 chr2 42724340 42724700 -207963154 + L1PA13 LINE L1 5802 6163 0 884 281 68 38 chr2 42724859 42725328 -207962526 + HAL1 LINE L1 1280 1762 -745 * 2555 220 64 9 chr2 42725324 42726187 -207961667 - L1MB7 LINE L1 -311 5873 4969 503 266 142 41 chr2 42726231 42726697 -207961157 + HAL1 LINE L1 1980 2492 -15 447 175 48 79 chr2 42728502 42728628 -207959226 - L1MD2 LINE L1 -44 6315 6194 567 176 15 7 chr2 42728699 42728835 -207959019 + CT-rich Low_complexity Low_complexity 3 139 0 1106 273 71 19 chr2 42728868 42729348 -207958506 - L1MDa LINE L1 -4670 1870 1366 207 100 0 0 chr2 42730542 42730572 -207957282 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 611 203 0 38 chr2 42731790 42731923 -207955931 + FLAM_A SINE Alu 6 133 -9 21 0 0 0 chr2 42731923 42731944 -207955910 + AT_rich Low_complexity Low_complexity 1 21 0 335 120 0 0 chr2 42733461 42733511 -207954343 - MADE1 DNA Mariner -30 50 1 204 392 108 18 chr2 42733595 42733761 -207954093 + MIR3 SINE MIR 17 197 -11 369 250 108 40 chr2 42733942 42734118 -207953736 + MER5A DNA MER1_type 1 188 -1 31 0 0 0 chr2 42734778 42734809 -207953045 + AT_rich Low_complexity Low_complexity 1 31 0 270 194 0 0 chr2 42736319 42736391 -207951463 + (TA)n Simple_repeat Simple_repeat 1 72 0 304 323 74 31 chr2 42737318 42737647 -207950207 + L1ME LINE L1 5318 5680 -441 23 0 0 0 chr2 42737706 42737729 -207950125 + AT_rich Low_complexity Low_complexity 1 23 0 2291 50 46 0 chr2 42738159 42738439 -207949415 + AluY SINE Alu 13 305 -6 346 382 58 14 chr2 42738633 42738840 -207949014 - MIR SINE MIR -19 243 28 315 297 30 10 chr2 42740441 42740542 -207947312 + MIR SINE MIR 49 151 -111 218 309 0 0 chr2 42740565 42740620 -207947234 + MER91B DNA MER1_type 1 55 -135 626 180 56 0 chr2 42740635 42740770 -207947084 - MIR SINE MIR -22 240 98 1889 134 7 20 chr2 42740919 42741225 -207946629 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr2 42741823 42741845 -207946009 + AT_rich Low_complexity Low_complexity 1 22 0 354 23 0 0 chr2 42742005 42742048 -207945806 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 561 294 65 45 chr2 42743640 42743885 -207943969 + MIR SINE MIR 13 262 0 2201 74 17 24 chr2 42744158 42744454 -207943400 - AluSc SINE Alu -15 294 1 23 0 0 29 chr2 42744467 42744478 -207943376 + AT_rich Low_complexity Low_complexity 1 11 -22 482 212 18 0 chr2 42744478 42744591 -207943263 - L1MD1 LINE L1 0 6242 6128 23 0 0 29 chr2 42744591 42744613 -207943241 + AT_rich Low_complexity Low_complexity 11 33 0 5992 33 6 0 chr2 42744613 42745337 -207942517 - L1PA4 LINE L1 -8 6147 5420 1590 30 0 0 chr2 42745339 42745557 -207942297 + L1PA4 LINE L1 5235 5452 -703 254 333 8 24 chr2 42745789 42745915 -207941939 + GA-rich Low_complexity Low_complexity 2 125 0 3924 151 9 2 chr2 42747309 42748525 -207939329 + L1P5 LINE L1 4555 5780 -371 297 68 0 0 chr2 42748525 42748569 -207939285 + (TA)n Simple_repeat Simple_repeat 2 45 0 374 0 22 0 chr2 42749013 42749059 -207938795 + (TA)n Simple_repeat Simple_repeat 1 47 0 235 327 100 33 chr2 42749442 42749592 -207938262 + MIR SINE MIR 62 221 -41 5056 134 16 14 chr2 42749604 42750437 -207937417 - Tigger1 DNA MER2_type 0 2418 1585 471 302 107 31 chr2 42750785 42751139 -207936715 + L1MB3 LINE L1 5023 5403 -743 270 229 61 32 chr2 42751194 42751302 -207936552 + L1MB3 LINE L1 5477 5586 -535 892 179 22 0 chr2 42751674 42751853 -207936001 + L1MB3 LINE L1 5991 6173 -10 322 71 0 36 chr2 42752116 42752172 -207935682 + (TA)n Simple_repeat Simple_repeat 2 55 0 221 428 12 6 chr2 42752299 42752465 -207935389 - L3 LINE CR1 -465 1112 946 182 309 29 0 chr2 42754080 42754148 -207933706 - L3 LINE CR1 -769 808 739 1275 262 68 46 chr2 42755769 42756223 -207931631 + MLT2B1 LTR ERVL 1 464 -56 1898 114 12 2 chr2 42756801 42757113 -207930741 - L1P LINE L1 -886 5260 4948 390 57 0 0 chr2 42757813 42757866 -207929988 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 757 244 75 10 chr2 42758009 42758210 -207929644 + MIR SINE MIR 11 224 -38 2154 93 38 0 chr2 42759001 42759290 -207928564 - AluSx SINE Alu -10 302 3 516 234 123 73 chr2 42760883 42761199 -207926655 + L2 LINE L2 1582 1913 -1401 848 234 90 49 chr2 42761199 42761697 -207926157 + LTR50 LTR ERVL 1 669 -126 362 172 54 21 chr2 42761764 42761857 -207925997 - L1MA9 LINE L1 0 6312 6217 2364 179 42 22 chr2 42761857 42762238 -207925616 - LOR1b LTR ERV1 0 461 68 3429 43 0 0 chr2 42762238 42762653 -207925201 - L1PA3 LINE L1 -3 6152 5738 2364 179 42 22 chr2 42762653 42762723 -207925131 - LOR1b LTR ERV1 -393 68 1 4647 166 23 6 chr2 42762723 42762781 -207925073 - L1MA9 LINE L1 -93 6219 6163 207 0 0 0 chr2 42762781 42762804 -207925050 + (TG)n Simple_repeat Simple_repeat 2 24 0 4647 166 23 6 chr2 42762804 42763585 -207924269 - L1MA9 LINE L1 -149 6163 5366 2501 263 120 19 chr2 42763620 42764719 -207923135 + L2 LINE L2 1909 3124 -189 279 0 0 0 chr2 42764837 42764868 -207922986 + (TG)n Simple_repeat Simple_repeat 2 32 0 1160 193 102 58 chr2 42765357 42765788 -207922066 + LTR7 LTR ERV1 1 450 0 3642 213 84 109 chr2 42765788 42766270 -207921584 + HERVH LTR ERV1 1 494 -7219 180 77 0 0 chr2 42766270 42766296 -207921558 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 3642 213 84 109 chr2 42766296 42767919 -207919935 + HERVH LTR ERV1 494 2052 -5661 410 271 163 24 chr2 42768649 42768979 -207918875 - L1ME LINE L1 -509 5657 5283 996 191 22 11 chr2 42769137 42769320 -207918534 + AluJo SINE Alu 120 304 -8 625 165 9 26 chr2 42770269 42770384 -207917470 + MER81 DNA DNA 2 114 0 292 311 165 0 chr2 42770457 42770560 -207917294 - L2 LINE L2 -2 3270 3151 246 344 0 0 chr2 42771526 42771590 -207916264 + L2 LINE L2 3201 3264 -8 244 267 53 0 chr2 42772265 42772340 -207915514 + MIR SINE MIR 184 262 0 373 294 162 0 chr2 42773287 42773423 -207914431 + MIR SINE MIR 31 188 -74 441 396 57 8 chr2 42774461 42774726 -207913128 - L2 LINE L2 0 3272 2995 505 17 0 0 chr2 42774940 42775032 -207912822 + L1PA4 LINE L1 6087 6178 0 251 259 74 0 chr2 42775065 42775173 -207912681 - L1MC4 LINE L1 -3 8039 7924 2117 244 44 64 chr2 42775355 42775790 -207912064 - L1ME2 LINE L1 -1 6163 5754 2383 147 75 0 chr2 42775790 42776192 -207911662 - MSTB1 LTR MaLR 0 432 1 2117 244 44 64 chr2 42776192 42776656 -207911198 - L1ME2 LINE L1 -410 5754 5282 1797 248 74 16 chr2 42776660 42777394 -207910460 - L1ME2 LINE L1 -920 5226 4451 920 220 65 79 chr2 42777400 42777522 -207910332 + MLT1A2 LTR MaLR 8 130 -244 312 23 23 0 chr2 42777522 42777566 -207910288 - L1PA4 LINE L1 -3 6152 6108 920 220 65 79 chr2 42777566 42777811 -207910043 + MLT1A2 LTR MaLR 130 370 -4 256 208 81 102 chr2 42777816 42778013 -207909841 - L1ME2 LINE L1 -1691 4455 4263 1130 280 129 25 chr2 42778035 42778325 -207909529 - MLT1G1 LTR MaLR -32 563 305 306 0 0 0 chr2 42778325 42778359 -207909495 + (GA)n Simple_repeat Simple_repeat 1 34 0 1130 280 129 25 chr2 42778359 42778578 -207909276 - MLT1G1 LTR MaLR -290 305 1 1475 266 104 35 chr2 42778578 42778684 -207909170 - L1ME2 LINE L1 -1876 4270 4173 2435 65 7 0 chr2 42778684 42778993 -207908861 - AluY SINE Alu 0 311 1 1475 266 104 35 chr2 42778993 42779667 -207908187 - L1ME2 LINE L1 -1973 4173 3436 244 198 81 23 chr2 42779726 42779812 -207908042 - L1ME2 LINE L1 -2859 3287 3197 411 244 13 0 chr2 42781111 42781189 -207906665 - AluJ/FLAM SINE Alu -223 79 1 23 33 0 0 chr2 42781197 42781227 -207906627 + AT_rich Low_complexity Low_complexity 1 30 0 295 297 109 63 chr2 42781260 42781499 -207906355 + MIR SINE MIR 13 262 0 2196 77 7 20 chr2 42781886 42782186 -207905668 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 42783131 42783154 -207904700 + AT_rich Low_complexity Low_complexity 1 23 0 276 321 83 42 chr2 42783816 42783984 -207903870 + MIR3 SINE MIR 9 183 -25 1039 107 0 0 chr2 42784254 42784403 -207903451 - AluSg/x SINE Alu -5 305 157 2271 110 10 0 chr2 42785189 42785498 -207902356 - AluSx SINE Alu 0 312 1 2478 188 93 31 chr2 42785533 42785623 -207902231 - L1MC3 LINE L1 -7 7778 7695 373 175 62 0 chr2 42785623 42785720 -207902134 - L1PA8 LINE L1 0 6172 6070 2478 188 93 31 chr2 42785720 42786240 -207901614 - L1MC3 LINE L1 -90 7695 7130 2325 100 0 3 chr2 42786473 42786783 -207901071 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr2 42787134 42787155 -207900699 + AT_rich Low_complexity Low_complexity 1 21 0 1641 132 18 7 chr2 42787667 42787947 -207899907 + L1MA5 LINE L1 6012 6294 -6 234 204 10 112 chr2 42788011 42788109 -207899745 + L2 LINE L2 3225 3312 -1 4144 153 42 46 chr2 42788769 42789736 -207898118 + pTR5 LTR ERV1 741 2025 -413 274 255 31 20 chr2 42789736 42789834 -207898020 + LTR30 LTR ERV1 544 642 -80 1483 101 4 9 chr2 42789837 42790064 -207897790 + pTR5 LTR ERV1 172 397 -2041 2203 114 7 3 chr2 42790341 42790647 -207897207 + AluSg SINE Alu 1 307 -3 1880 208 109 36 chr2 42790659 42791126 -207896728 + MLT1D LTR MaLR 4 504 -1 230 293 91 0 chr2 42791231 42791330 -207896524 - L2 LINE L2 -199 3073 2966 379 208 9 9 chr2 42791330 42791436 -207896418 + G-rich Low_complexity Low_complexity 5 110 0 25 75 0 0 chr2 42792819 42792872 -207894982 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr2 42793245 42793270 -207894584 + AT_rich Low_complexity Low_complexity 1 25 0 722 119 0 0 chr2 42795307 42795416 -207892438 - L1P LINE L1 -1156 4990 4882 4761 60 2 20 chr2 42795416 42796050 -207891804 + L1PA8 LINE L1 5546 6171 -1 5424 109 16 22 chr2 42796264 42797151 -207890703 - L1MA5A LINE L1 -5 6292 5412 1236 219 32 74 chr2 42800589 42801118 -207886736 - Charlie4a DNA MER1_type 0 508 2 564 272 36 28 chr2 42801148 42801200 -207886654 - L1ME LINE L1 -580 5582 5532 388 77 0 240 chr2 42801200 42801304 -207886550 + MADE1 DNA Mariner 2 80 0 564 272 36 28 chr2 42801304 42801551 -207886303 - L1ME LINE L1 -630 5532 5260 504 244 8 25 chr2 42801766 42801939 -207885915 - MER63A DNA MER1_type 0 210 38 578 303 106 24 chr2 42802044 42802797 -207885057 - L1ME LINE L1 -1230 4916 4102 337 338 67 13 chr2 42802992 42803528 -207884326 - L1ME LINE L1 -2283 3863 3299 746 231 38 71 chr2 42803730 42803968 -207883886 + MLT1D LTR MaLR 1 230 -275 702 191 21 14 chr2 42803966 42804107 -207883747 + MLT1D LTR MaLR 364 505 0 * 22 0 0 0 chr2 42804200 42804222 -207883632 + AT_rich Low_complexity Low_complexity 1 22 0 513 0 0 0 chr2 42804589 42804646 -207883208 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 410 306 32 12 chr2 42804721 42804773 -207883081 - L1ME LINE L1 -3759 2387 2338 1806 164 14 0 chr2 42804773 42805060 -207882794 - AluSx SINE Alu -19 293 3 410 306 32 12 chr2 42805060 42805259 -207882595 - L1ME LINE L1 -3808 2338 2131 228 351 34 34 chr2 42807169 42807317 -207880537 - MIR SINE MIR -92 170 23 237 287 223 0 chr2 42807441 42807598 -207880256 - MIR SINE MIR -63 199 8 199 291 55 73 chr2 42807665 42807775 -207880079 + MIR3 SINE MIR 95 202 -6 21 0 0 0 chr2 42807790 42807811 -207880043 + AT_rich Low_complexity Low_complexity 1 21 0 275 240 13 13 chr2 42808242 42808317 -207879537 + MLT1D LTR MaLR 431 505 0 806 211 56 56 chr2 42808415 42808681 -207879173 + L1MD3 LINE L1 7730 7995 0 2249 118 0 0 chr2 42808726 42809032 -207878822 - AluSg SINE Alu 0 310 5 307 265 21 37 chr2 42809471 42809596 -207878258 - MIR SINE MIR -80 128 28 276 306 174 0 chr2 42809829 42809950 -207877904 + LTR33A LTR ERVL 19 160 -361 198 156 0 0 chr2 42810351 42810396 -207877458 + (CA)n Simple_repeat Simple_repeat 2 46 0 577 262 21 61 chr2 42810508 42810636 -207877218 + Charlie7 DNA MER1_type 1500 1632 -980 2348 90 0 0 chr2 42810636 42810925 -207876929 - AluSc SINE Alu -20 289 1 577 262 21 61 chr2 42810925 42811075 -207876779 + Charlie7 DNA MER1_type 1632 1767 -845 866 305 72 19 chr2 42811297 42811838 -207876016 + L1ME LINE L1 589 1158 -5214 * 30092 57 4 1 chr2 42811836 42815641 -207872213 + L1P LINE L1 2 3816 -2330 4405 32 0 0 chr2 42815641 42816154 -207871700 + L1PA4 LINE L1 5633 6155 0 569 307 53 26 chr2 42816159 42816589 -207871265 + L1ME LINE L1 1042 1483 -4901 234 91 0 0 chr2 42816590 42816623 -207871231 + (CA)n Simple_repeat Simple_repeat 2 34 0 11037 204 33 22 chr2 42817603 42819546 -207868308 + L1PA13 LINE L1 156 2176 -4621 2203 121 0 13 chr2 42819546 42819859 -207867995 + AluSc SINE Alu 1 309 0 11037 204 33 22 chr2 42819859 42820987 -207866867 + L1PA13 LINE L1 2176 3290 -3507 2278 138 5 36 chr2 42820987 42821110 -207866744 - THE1C LTR MaLR 0 375 250 2194 134 0 3 chr2 42821110 42821423 -207866431 + AluSx SINE Alu 1 312 0 2278 138 5 36 chr2 42821423 42821684 -207866170 - THE1C LTR MaLR -125 250 3 8196 127 18 68 chr2 42821686 42823066 -207864788 - THE1C-int LTR MaLR 0 1580 272 2378 86 3 0 chr2 42823066 42823358 -207864496 + AluY SINE Alu 2 294 -17 8196 127 18 68 chr2 42823358 42823402 -207864452 - THE1C-int LTR MaLR -1308 272 227 11128 181 19 47 chr2 42823402 42826433 -207861421 + L1PA13 LINE L1 3789 6810 -4 23 33 0 0 chr2 42826435 42826465 -207861389 + AT_rich Low_complexity Low_complexity 1 30 0 2326 108 0 6 chr2 42826954 42827268 -207860586 - AluSx SINE Alu 0 312 1 255 260 55 62 chr2 42827309 42827455 -207860399 - L2 LINE L2 -7 3306 3162 273 391 161 0 chr2 42827488 42827767 -207860087 - L2 LINE L2 -337 2977 2654 280 235 306 0 chr2 42828067 42828165 -207859689 + MER63 DNA MER1_type 12 765 -71 950 191 41 20 chr2 42828221 42828467 -207859387 - L1M4 LINE L1 -946 5200 4950 536 227 163 64 chr2 42828593 42828968 -207858886 - LTR37B LTR ERV1 -6 462 51 1110 193 20 0 chr2 42830224 42830468 -207857386 - L1MA8 LINE L1 -4 6287 6039 2082 149 0 0 chr2 42830907 42831215 -207856639 + AluSx SINE Alu 1 308 -4 303 360 0 0 chr2 42831385 42831485 -207856369 + MIR3 SINE MIR 87 186 -22 417 296 90 16 chr2 42831561 42831750 -207856104 - LTR16A LTR ERVL -5 445 243 17279 31 0 0 chr2 42831750 42833843 -207854011 - L1PA3 LINE L1 -1755 4391 2299 8300 27 2 0 chr2 42833843 42835592 -207852262 + L1PA3 LINE L1 4405 6154 -1 763 280 11 5 chr2 42835592 42835781 -207852073 - LTR16A LTR ERVL -195 255 66 219 278 189 0 chr2 42836285 42836375 -207851479 - L2 LINE L2 -6 3307 3201 2093 113 3 0 chr2 42836959 42837263 -207850591 + AluSg SINE Alu 1 305 0 1235 310 96 47 chr2 42837274 42838079 -207849775 + L2 LINE L2 1770 2629 -685 969 204 63 47 chr2 42838079 42838334 -207849520 + MIR SINE MIR 2 260 -2 1235 310 96 47 chr2 42838334 42838479 -207849375 + L2 LINE L2 2629 2766 -548 252 248 223 13 chr2 42838551 42838708 -207849146 + L2 LINE L2 3124 3313 0 198 103 0 0 chr2 42839485 42839514 -207848340 + (TAA)n Simple_repeat Simple_repeat 1 29 0 507 257 63 53 chr2 42839527 42839733 -207848121 - MIR SINE MIR -21 241 34 180 287 119 59 chr2 42839921 42840022 -207847832 - L2 LINE L2 -174 3098 2992 12951 146 8 8 chr2 42840151 42844013 -207843841 + HERVH LTR ERV1 2294 6091 -1622 4804 153 8 6 chr2 42843999 42844798 -207843056 + HERVH LTR ERV1 6914 7713 0 * 1184 207 96 40 chr2 42844798 42845224 -207842630 + LTR7 LTR ERV1 1 450 0 1294 276 30 21 chr2 42845586 42846020 -207841834 + L1ME1 LINE L1 66 503 -5893 2530 231 64 34 chr2 42846027 42847175 -207840679 + L1ME1 LINE L1 5050 6231 -4 552 276 35 22 chr2 42847404 42847636 -207840218 - L1MB8 LINE L1 -32 6146 5912 500 194 32 48 chr2 42847637 42847761 -207840093 - L1MD2 LINE L1 -109 6250 6129 479 279 28 48 chr2 42847736 42847987 -207839867 - L1M4c LINE L1 -4704 1680 1435 * 256 263 88 91 chr2 42848313 42849183 -207838671 + L1M4 LINE L1 4472 5339 -807 22 0 0 0 chr2 42849571 42849593 -207838261 + AT_rich Low_complexity Low_complexity 1 22 0 432 240 19 0 chr2 42850594 42850698 -207837156 - MER117 DNA MER1_type -91 106 1 221 282 113 48 chr2 42850710 42850834 -207837020 + MIR SINE MIR 65 196 -66 24 85 0 0 chr2 42850920 42850979 -207836875 + AT_rich Low_complexity Low_complexity 1 59 0 2126 181 18 0 chr2 42850991 42851390 -207836464 - L1MB2 LINE L1 0 6171 5766 3162 203 21 32 chr2 42851437 42852637 -207835217 - L1MB8 LINE L1 -362 5809 4629 296 288 17 34 chr2 42854371 42854489 -207833365 + GA-rich Low_complexity Low_complexity 1 116 0 2550 170 43 4 chr2 42854531 42855044 -207832810 - L1MA5A LINE L1 -3 6294 5762 1725 151 56 22 chr2 42855045 42855369 -207832485 - THE1C LTR MaLR -40 335 1 3108 146 31 55 chr2 42855370 42855535 -207832319 - L1MA5A LINE L1 -549 5748 5581 2191 135 34 63 chr2 42855535 42855980 -207831874 - MSTB1 LTR MaLR 0 432 1 3108 146 31 55 chr2 42855980 42856902 -207830952 - L1MA5A LINE L1 -716 5581 4688 2200 169 39 8 chr2 42856900 42857386 -207830468 + L1MA5A LINE L1 4189 4689 -1457 * 239 333 58 42 chr2 42858316 42858436 -207829418 - MIR SINE MIR -72 190 69 487 279 25 8 chr2 42858730 42858852 -207829002 - MIR SINE MIR -65 143 20 262 288 14 0 chr2 42859884 42859957 -207827897 + L2 LINE L2 3238 3311 -2 805 194 106 0 chr2 42861074 42861234 -207826620 + MER45A DNA AcHobo 2 178 0 299 303 0 0 chr2 42861753 42861829 -207826025 + MIR SINE MIR 187 262 0 273 326 70 16 chr2 42861966 42862095 -207825759 + MIR SINE MIR 113 248 -14 4187 130 8 0 chr2 42862228 42862835 -207825019 - LTR9 LTR ERV1 0 612 1 222 261 77 0 chr2 42862853 42862918 -207824936 + L2 LINE L2 2979 3048 -224 401 313 67 7 chr2 42863056 42863206 -207824648 + MLT1G1 LTR MaLR 25 183 -412 342 161 46 0 chr2 42863212 42863299 -207824555 + GA-rich Low_complexity Low_complexity 4 94 0 2136 143 60 5 chr2 42863395 42863765 -207824089 - L1M2 LINE L1 -570 5742 5353 220 250 26 0 chr2 42864925 42865001 -207822853 + (TA)n Simple_repeat Simple_repeat 1 78 0 702 81 0 0 chr2 42866553 42866652 -207821202 - L1MA2 LINE L1 0 6304 6206 1109 236 5 5 chr2 42866652 42866864 -207820990 - L1M1 LINE L1 -5967 1598 1387 2253 246 65 58 chr2 42866888 42867999 -207819855 - L1M4 LINE L1 -785 5361 4187 227 258 72 10 chr2 42868059 42868156 -207819698 + HAL1 LINE L1 48 150 -2357 2111 230 58 6 chr2 42868185 42868668 -207819186 + LTR53 LTR ERVL 1 508 -11 449 319 128 22 chr2 42868727 42869094 -207818760 + HAL1 LINE L1 270 675 -1832 1797 216 2 62 chr2 42869099 42869458 -207818396 + MLT2D LTR ERVL 6 336 -78 189 0 0 0 chr2 42869458 42869479 -207818375 + (TC)n Simple_repeat Simple_repeat 2 22 0 1797 216 2 62 chr2 42869479 42869554 -207818300 + MLT2D LTR ERVL 336 414 0 983 207 57 0 chr2 42869638 42869831 -207818023 + MER20 DNA MER1_type 1 204 -15 440 275 96 33 chr2 42870234 42870474 -207817380 + HAL1 LINE L1 1502 1756 -751 387 276 88 35 chr2 42870476 42870704 -207817150 + HAL1 LINE L1 1838 2077 -430 2476 64 0 0 chr2 42870715 42871011 -207816843 + AluY SINE Alu 1 296 -15 976 184 26 0 chr2 42871234 42871424 -207816430 + MSTD LTR MaLR 198 392 -4 1983 107 24 7 chr2 42871611 42871901 -207815953 - AluSc SINE Alu -14 295 1 23 33 0 0 chr2 42872035 42872065 -207815789 + AT_rich Low_complexity Low_complexity 1 30 0 721 171 44 25 chr2 42874000 42874158 -207813696 + LTR41 LTR ERVL 1 161 -612 395 224 211 36 chr2 42874565 42874788 -207813066 + LTR41 LTR ERVL 506 767 -6 272 298 242 6 chr2 42874846 42875007 -207812847 - MIR SINE MIR -13 249 51 27 29 0 0 chr2 42875779 42875813 -207812041 + AT_rich Low_complexity Low_complexity 1 34 0 260 326 41 0 chr2 42876342 42876440 -207811414 - MIR3 SINE MIR -12 196 95 232 139 93 0 chr2 42876466 42876509 -207811345 - MLT2C2 LTR ERVL 0 464 418 342 0 0 0 chr2 42876511 42876549 -207811305 + (TG)n Simple_repeat Simple_repeat 2 39 0 436 231 103 0 chr2 42876582 42876699 -207811155 - MLT2B1 LTR ERVL -31 489 361 3135 160 11 15 chr2 42876699 42877242 -207810612 - ERVL LTR ERVL -274 5490 4950 542 305 50 35 chr2 42877420 42877797 -207810057 - L1MC/D LINE L1 -2109 5699 5317 1767 203 15 25 chr2 42878218 42878617 -207809237 + L1MD3 LINE L1 7431 7825 -170 339 249 119 43 chr2 42878665 42878850 -207809004 - L1ME4a LINE L1 -225 5896 5698 235 326 11 21 chr2 42878901 42878996 -207808858 - L1ME4a LINE L1 -2137 5671 5578 776 195 129 9 chr2 42879160 42879261 -207808593 - L1MA9 LINE L1 -38 6274 6186 221 57 29 0 chr2 42879261 42879296 -207808558 + (TG)n Simple_repeat Simple_repeat 1 36 0 776 195 129 9 chr2 42879296 42879404 -207808450 - L1MA9 LINE L1 -126 6186 6040 4552 169 28 76 chr2 42880170 42880663 -207807191 - L1MA9 LINE L1 -10 6302 5787 2351 132 25 0 chr2 42880663 42881028 -207806826 + THE1C LTR MaLR 2 375 0 4552 169 28 76 chr2 42881028 42881054 -207806800 - L1MA9 LINE L1 -525 5787 5761 243 0 0 0 chr2 42881054 42881081 -207806773 + (TG)n Simple_repeat Simple_repeat 2 28 0 4552 169 28 76 chr2 42881081 42882388 -207805466 - L1MA9 LINE L1 -551 5761 4565 2587 175 35 1 chr2 42882385 42883081 -207804773 - L1PB1 LINE L1 -681 5470 4760 * 4633 102 15 3 chr2 42883081 42883755 -207804099 + L1PB1 LINE L1 5465 6149 -2 387 277 124 44 chr2 42883863 42883935 -207803919 - L1MEd LINE L1 -5611 508 443 1905 150 0 19 chr2 42883935 42884242 -207803612 - AluSx SINE Alu -9 303 3 387 277 124 44 chr2 42884242 42884418 -207803436 - L1MEd LINE L1 -5676 443 240 370 273 36 9 chr2 42884456 42884566 -207803288 - L1MEd LINE L1 -6001 118 6 343 250 95 34 chr2 42884619 42884678 -207803176 - L1MA10 LINE L1 0 6334 6276 1615 234 29 17 chr2 42884678 42885097 -207802757 - L1ME1 LINE L1 -56 6110 5687 526 195 49 8 chr2 42885114 42885289 -207802565 - L1 LINE L1 -1568 4578 4397 * 631 239 5 16 chr2 42885259 42885443 -207802411 - L1 LINE L1 -1661 4485 4304 * 2935 215 24 1 chr2 42885434 42886137 -207801717 + L1 LINE L1 3199 3917 -2229 2128 231 12 20 chr2 42886287 42886789 -207801065 - LTR31 LTR ERV1 -17 602 105 368 290 62 49 chr2 42887583 42887745 -207800109 + MIR3 SINE MIR 39 202 -6 23 54 0 0 chr2 42888324 42888361 -207799493 + AT_rich Low_complexity Low_complexity 1 37 0 230 208 0 0 chr2 42888514 42888562 -207799292 + MER116 DNA Mariner 5 52 -28 213 39 0 0 chr2 42889663 42889689 -207798165 + (TAGA)n Simple_repeat Simple_repeat 3 28 0 342 300 89 32 chr2 42889689 42889870 -207797984 - L1M4 LINE L1 -1537 4609 4415 35 24 0 0 chr2 42889893 42889935 -207797919 + AT_rich Low_complexity Low_complexity 1 42 0 2039 135 0 7 chr2 42890000 42890304 -207797550 + AluSx SINE Alu 1 302 -10 217 329 61 0 chr2 42890319 42890401 -207797453 - MIR SINE MIR -108 154 68 212 51 0 51 chr2 42892135 42892174 -207795680 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 4772 11 2 4 chr2 42892516 42893061 -207794793 - L1PA3 LINE L1 -3 6152 5609 21331 159 29 16 chr2 42895165 42902776 -207785078 - L1MA1 LINE L1 0 7721 6 22 0 0 0 chr2 42902864 42902886 -207784968 + AT_rich Low_complexity Low_complexity 1 22 0 459 319 37 24 chr2 42903018 42903316 -207784538 + L1MC4a LINE L1 5581 5882 -1926 25 51 0 0 chr2 42903490 42903529 -207784325 + AT_rich Low_complexity Low_complexity 1 39 0 25 51 0 0 chr2 42903588 42903627 -207784227 + AT_rich Low_complexity Low_complexity 1 39 0 1673 149 43 25 chr2 42903994 42904370 -207783484 + Tigger3(Golem) DNA MER2_type 1 3028 -1 2726 153 19 0 chr2 42905000 42905469 -207782385 + L1MB3 LINE L1 5697 6174 -9 21 0 0 0 chr2 42905953 42905974 -207781880 + AT_rich Low_complexity Low_complexity 1 21 0 4510 149 5 32 chr2 42908308 42908816 -207779038 + L1PA12 LINE L1 4787 5307 -861 2301 89 0 7 chr2 42908816 42909119 -207778735 + AluSg1 SINE Alu 1 301 -8 4510 149 5 32 chr2 42909119 42909810 -207778044 + L1PA12 LINE L1 5307 5958 -210 7948 136 18 2 chr2 42909978 42911255 -207776599 + HSMAR2 DNA Mariner 4 1300 -2 2194 140 0 0 chr2 42912027 42912335 -207775519 - AluSx SINE Alu -4 308 1 1292 131 0 0 chr2 42912630 42912806 -207775048 - AluSx SINE Alu -136 176 1 2333 174 13 7 chr2 42913083 42913537 -207774317 + L1MA8 LINE L1 5825 6281 -10 1369 114 50 23 chr2 42913792 42914011 -207773843 - MER30 DNA MER1_type -4 226 2 24 0 0 0 chr2 42916873 42916897 -207770957 + AT_rich Low_complexity Low_complexity 1 24 0 2311 108 0 3 chr2 42916950 42917255 -207770599 + AluSg SINE Alu 1 304 -6 3473 132 9 17 chr2 42917452 42917983 -207769871 - MER1A DNA MER1_type 0 527 1 193 57 57 0 chr2 42919299 42919334 -207768520 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 384 284 63 16 chr2 42919713 42919840 -207768014 + MIR3 SINE MIR 71 203 -5 2230 109 3 3 chr2 42920451 42920753 -207767101 - AluSx SINE Alu -10 302 1 221 255 20 20 chr2 42921062 42921113 -207766741 + L2 LINE L2 3207 3257 -15 21 36 0 0 chr2 42921273 42921301 -207766553 + AT_rich Low_complexity Low_complexity 1 28 0 488 246 87 7 chr2 42921415 42921553 -207766301 - MIR SINE MIR -1 261 113 2042 173 3 0 chr2 42921572 42921902 -207765952 - MLT1A1 LTR MaLR -34 331 1 287 330 44 0 chr2 42921921 42922012 -207765842 - MIR SINE MIR -166 96 2 349 234 62 31 chr2 42923813 42923941 -207763913 - L1MC4a LINE L1 -1894 5914 5783 21 0 0 0 chr2 42923953 42923974 -207763880 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr2 42924131 42924174 -207763680 + AT_rich Low_complexity Low_complexity 1 43 0 370 346 19 38 chr2 42924266 42924477 -207763377 - HAL1b LINE L1 -477 871 665 288 337 83 37 chr2 42924552 42924852 -207763002 - HAL1b LINE L1 -782 566 253 180 0 0 0 chr2 42925181 42925201 -207762653 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1849 160 50 16 chr2 42925650 42926013 -207761841 + THE1C LTR MaLR 1 375 0 8328 144 12 37 chr2 42926015 42927441 -207760413 + THE1C-int LTR MaLR 3 1392 -188 434 70 0 56 chr2 42927441 42927512 -207760342 + THE1C-int LTR MaLR 1514 1580 0 1825 136 43 59 chr2 42927512 42927887 -207759967 + THE1C LTR MaLR 1 369 -6 349 285 133 19 chr2 42928482 42928745 -207759109 - L1M4 LINE L1 -1827 4319 4027 227 139 14 42 chr2 42930567 42930639 -207757215 + CT-rich Low_complexity Low_complexity 4 73 0 315 324 34 28 chr2 42934374 42934553 -207753301 - L2 LINE L2 -932 2382 2203 246 209 0 0 chr2 42935260 42935303 -207752551 - L2 LINE L2 -84 3229 3187 1109 188 32 28 chr2 42935996 42936214 -207751640 - MER20 DNA MER1_type 0 219 1 23 54 0 0 chr2 42936347 42936384 -207751470 + AT_rich Low_complexity Low_complexity 1 37 0 3113 147 59 4 chr2 42936923 42937447 -207750407 - MER41C LTR ERV1 0 554 2 211 137 68 0 chr2 42937672 42937745 -207750109 + (TA)n Simple_repeat Simple_repeat 2 79 0 369 190 20 0 chr2 42938342 42938442 -207749412 - L1MA8 LINE L1 -4 6287 6186 31 0 0 0 chr2 42940492 42940523 -207747331 + AT_rich Low_complexity Low_complexity 1 31 0 292 304 141 15 chr2 42940864 42940999 -207746855 + MIR SINE MIR 39 190 -72 3106 200 72 48 chr2 42941202 42942031 -207745823 + L1MD2 LINE L1 5273 6121 -238 331 303 0 0 chr2 42942635 42942724 -207745130 - L1MC4 LINE L1 -1339 6703 6615 257 244 35 0 chr2 42942735 42942821 -207745033 - L1MC4 LINE L1 -1339 6703 6615 246 277 0 11 chr2 42942737 42942831 -207745023 + L1MC4 LINE L1 6614 6706 -1336 * 1445 230 94 38 chr2 42944989 42945534 -207742320 - MLT1F1 LTR MaLR 0 567 5 216 135 0 0 chr2 42945587 42945624 -207742230 + (TA)n Simple_repeat Simple_repeat 1 37 0 1671 170 31 9 chr2 42945786 42946109 -207741745 + MER2 DNA MER2_type 2 331 -14 233 332 97 42 chr2 42946329 42946546 -207741308 + MLT1H LTR MaLR 107 335 -214 239 204 0 37 chr2 42946807 42946861 -207740993 + MIR SINE MIR 80 131 -131 647 241 0 6 chr2 42947262 42947420 -207740434 - L1PA15 LINE L1 -1 6164 6008 235 296 52 44 chr2 42947622 42947757 -207740097 - MLT1I LTR MaLR -168 241 106 780 202 65 65 chr2 42948354 42948616 -207739238 - MER63C DNA MER1_type 0 930 669 1689 206 37 124 chr2 42948617 42949287 -207738567 + LTR9 LTR ERV1 1 612 0 4811 182 43 25 chr2 42949287 42950935 -207736919 + HUERS-P3 LTR ERV1 1 1747 -5671 18534 188 48 26 chr2 42950953 42953817 -207734037 + HUERS-P3 LTR ERV1 2033 4970 -2597 2297 104 7 0 chr2 42953817 42954126 -207733728 - AluY SINE Alu 0 311 1 18534 188 48 26 chr2 42954126 42956194 -207731660 + HUERS-P3 LTR ERV1 4970 6991 -576 1040 117 11 17 chr2 42956178 42956363 -207731491 + HUERS-P3 LTR ERV1 3945 4128 -3688 * 1521 156 23 19 chr2 42956577 42956834 -207731020 + HUERS-P3 LTR ERV1 8659 8916 -3 1543 212 7 76 chr2 42956839 42957259 -207730595 + LTR9 LTR ERV1 1 391 -221 660 252 51 65 chr2 42957230 42957389 -207730465 + LTR9 LTR ERV1 323 478 -134 * 2209 107 0 0 chr2 42957389 42957678 -207730176 - AluY SINE Alu -19 292 4 660 252 51 65 chr2 42957678 42957812 -207730042 + LTR9 LTR ERV1 478 612 0 * 1708 150 111 171 chr2 42957812 42958524 -207729330 - MER63C DNA MER1_type -261 669 1 428 380 157 3 chr2 42958913 42959231 -207728623 - L3 LINE CR1 -353 1224 858 516 236 65 0 chr2 42959753 42959876 -207727978 - MIR SINE MIR -86 176 46 21 36 0 0 chr2 42961266 42961294 -207726560 + AT_rich Low_complexity Low_complexity 1 28 0 271 273 15 15 chr2 42961318 42961384 -207726470 - L2 LINE L2 -27 3245 3180 2431 63 7 0 chr2 42962660 42962961 -207724893 + AluY SINE Alu 1 303 -8 303 28 0 0 chr2 42964118 42964154 -207723700 + (CA)n Simple_repeat Simple_repeat 1 36 0 2098 127 10 3 chr2 43015145 43015453 -207672401 - AluSx SINE Alu -2 310 1 2142 138 0 0 chr2 43017059 43017356 -207670498 - AluSx SINE Alu -15 297 1 769 338 82 14 chr2 43017876 43018463 -207669391 - L2 LINE L2 -16 3297 2680 303 250 97 48 chr2 43019186 43019310 -207668544 - MIR SINE MIR -71 191 62 189 0 0 0 chr2 43019777 43019798 -207668056 + (T)n Simple_repeat Simple_repeat 1 21 0 357 364 59 17 chr2 43020357 43020475 -207667379 - L2 LINE L2 -2 3270 3148 226 234 0 0 chr2 43020757 43020804 -207667050 + (CTATT)n Simple_repeat Simple_repeat 3 49 0 2268 82 0 23 chr2 43021062 43021365 -207666489 + AluY SINE Alu 3 298 -13 1603 192 14 10 chr2 43021746 43022037 -207665817 + AluJo SINE Alu 1 292 -20 2059 134 0 22 chr2 43022226 43022540 -207665314 - AluSg SINE Alu -3 307 1 484 341 124 38 chr2 43022790 43023209 -207664645 + L2 LINE L2 2818 3272 0 307 351 20 14 chr2 43023639 43023787 -207664067 - MIR3 SINE MIR -12 196 48 265 182 64 47 chr2 43024226 43024328 -207663526 - MLT1G LTR MaLR -18 572 431 291 54 0 0 chr2 43024409 43024446 -207663408 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr2 43025291 43025324 -207662530 + AT_rich Low_complexity Low_complexity 1 33 0 242 145 101 14 chr2 43025384 43025453 -207662401 - L1MA3 LINE L1 0 6305 6231 * 842 140 30 1 chr2 43025392 43025552 -207662302 + L1MA2 LINE L1 5835 5958 -203 373 208 0 0 chr2 43025557 43025629 -207662225 - MER94 DNA DNA -60 74 3 630 211 26 26 chr2 43027697 43027849 -207660005 + L1MB7 LINE L1 6016 6167 -17 10095 16 0 0 chr2 43028062 43030021 -207657833 - L1HS LINE L1 0 6155 4197 * 14598 24 0 0 chr2 43030017 43031759 -207656095 + L1HS LINE L1 2460 4201 -1945 10100 180 31 2 chr2 43031784 43033918 -207653936 - L1P5 LINE L1 -583 5573 3379 13088 212 56 4 chr2 43034014 43037603 -207650251 + L1 LINE L1 1524 5288 -858 2540 57 0 0 chr2 43037987 43038286 -207649568 + AluY SINE Alu 1 299 -12 1031 31 0 8 chr2 43038286 43038415 -207649439 + L1PB1 LINE L1 6022 6149 -2 398 264 64 18 chr2 43038415 43038525 -207649329 - MER5B DNA MER1_type -61 117 3 305 330 153 48 chr2 43040575 43040640 -207647214 + L2 LINE L2 1276 1333 -1981 2123 108 0 40 chr2 43040640 43040964 -207646890 - AluSx SINE Alu -1 311 1 305 330 153 48 chr2 43040964 43042075 -207645779 + L2 LINE L2 1333 2575 -739 336 384 24 76 chr2 43042235 43042524 -207645330 + L2 LINE L2 2997 3270 -2 1115 322 32 26 chr2 43043294 43043800 -207644054 - L2 LINE L2 0 3313 2805 249 308 95 80 chr2 43044718 43045235 -207642619 + L2 LINE L2 2301 2830 -484 2592 45 0 6 chr2 43045235 43045548 -207642306 - AluY SINE Alu 0 311 1 249 308 95 80 chr2 43045548 43045630 -207642224 + L2 LINE L2 2830 2909 -405 232 179 0 0 chr2 43045792 43045831 -207642023 - L2 LINE L2 -1 3312 3274 210 208 0 0 chr2 43047589 43047642 -207640212 + (CA)n Simple_repeat Simple_repeat 2 54 0 354 280 11 11 chr2 43048478 43048571 -207639283 + MIR SINE MIR 24 116 -92 566 318 28 37 chr2 43048571 43048788 -207639066 - MIR SINE MIR -1 261 47 572 217 7 35 chr2 43048836 43048979 -207638875 + L2 LINE L2 3170 3308 -5 969 322 93 16 chr2 43049328 43049834 -207638020 - L3 LINE CR1 -443 1134 590 695 290 46 8 chr2 43050501 43050760 -207637094 + LTR16C LTR ERVL 217 485 -6 268 325 0 0 chr2 43051963 43052043 -207635811 + MIR SINE MIR 64 143 -119 264 287 213 9 chr2 43052523 43052631 -207635223 + L2 LINE L2 3141 3270 -2 21 0 0 0 chr2 43052952 43052973 -207634881 + AT_rich Low_complexity Low_complexity 1 21 0 225 282 14 14 chr2 43054979 43055050 -207632804 + MIR3 SINE MIR 103 173 -35 1071 228 37 8 chr2 43055330 43055571 -207632283 + L1MCa LINE L1 4 251 -6175 2400 67 3 0 chr2 43056030 43056328 -207631526 - AluY SINE Alu -12 299 1 194 315 108 15 chr2 43056328 43056458 -207631396 + MIR SINE MIR 77 218 -44 232 350 181 19 chr2 43057086 43057246 -207630608 - L3 LINE CR1 -1 1576 1391 2294 107 0 3 chr2 43058394 43058703 -207629151 + AluSc SINE Alu 1 308 -1 550 286 0 0 chr2 43059206 43059318 -207628536 - L2 LINE L2 -1 3271 3160 15724 194 127 18 chr2 43060425 43064573 -207623281 + L1PA12 LINE L1 1029 6439 -1145 229 81 135 0 chr2 43064589 43064626 -207623228 + L1PA13 LINE L1 6119 6160 -3 23 33 0 0 chr2 43064626 43064656 -207623198 + AT_rich Low_complexity Low_complexity 1 30 0 432 348 69 20 chr2 43064968 43065215 -207622639 + MIR SINE MIR 3 261 -1 4502 155 35 9 chr2 43065439 43066256 -207621598 - L1PB4 LINE L1 -3 6153 5315 23 33 0 0 chr2 43066379 43066409 -207621445 + AT_rich Low_complexity Low_complexity 1 30 0 196 174 109 0 chr2 43066419 43066465 -207621389 + MER5B DNA MER1_type 106 156 -22 777 308 77 6 chr2 43068236 43068561 -207619293 + L1M2 LINE L1 103 450 -6399 1543 159 39 0 chr2 43068682 43069015 -207618839 + L1 LINE L1 3076 3421 -2725 1366 275 90 30 chr2 43069523 43070236 -207617618 + L1MC4 LINE L1 7122 7877 -165 287 161 0 16 chr2 43070248 43070310 -207617544 + GA-rich Low_complexity Low_complexity 1 61 0 194 261 197 58 chr2 43070418 43070606 -207617248 + L3b LINE CR1 1284 1497 -86 253 246 167 38 chr2 43072310 43072598 -207615256 - L1MC4a LINE L1 -1630 6178 5854 548 89 13 0 chr2 43074461 43074540 -207613314 - MADE1 DNA Mariner 0 80 1 207 176 0 0 chr2 43074566 43074600 -207613254 + MIR SINE MIR 159 192 -70 249 332 99 58 chr2 43076621 43076844 -207611010 + LTR67 LTR ERVL 43 274 -283 302 241 54 9 chr2 43076851 43076963 -207610891 - MER104 DNA Tc2 -63 117 1 240 272 88 8 chr2 43078894 43079019 -207608835 + L1ME4a LINE L1 5975 6109 -12 2747 154 68 6 chr2 43079328 43079875 -207607979 - L1MA7 LINE L1 0 6291 5711 319 280 125 36 chr2 43079875 43080043 -207607811 + MIR SINE MIR 66 248 -14 373 281 101 14 chr2 43080107 43080246 -207607608 - MIR SINE MIR -28 234 84 213 94 0 0 chr2 43080793 43080825 -207607029 + (TA)n Simple_repeat Simple_repeat 1 32 0 10780 37 12 1 chr2 43080827 43082926 -207604928 - L1PA5 LINE L1 -3 6151 4045 448 324 35 12 chr2 43083472 43083642 -207604212 + MIR3 SINE MIR 26 199 -9 292 317 129 32 chr2 43084263 43084604 -207603250 + LTR33 LTR ERVL 134 507 -14 1499 174 12 0 chr2 43084609 43084851 -207603003 + Tigger3(Golem) DNA MER2_type 2780 3024 -5 227 320 82 51 chr2 43086752 43087008 -207600846 + L2 LINE L2 1893 2156 -1158 594 385 82 11 chr2 43087866 43088230 -207599624 + MLT1K LTR MaLR 27 416 -172 21 0 0 0 chr2 43088912 43088933 -207598921 + AT_rich Low_complexity Low_complexity 1 21 0 2295 114 0 0 chr2 43089516 43089822 -207598032 + AluSg SINE Alu 1 306 -4 195 205 0 26 chr2 43090064 43090103 -207597751 - MIR SINE MIR -88 120 83 594 175 8 42 chr2 43090520 43090640 -207597214 - MER58A DNA MER1_type -8 216 101 1865 230 36 34 chr2 43090647 43091175 -207596679 - MER41B LTR ERV1 -12 597 114 504 274 0 0 chr2 43091175 43091277 -207596577 - MER58A DNA MER1_type -2 105 4 323 291 40 54 chr2 43091888 43092023 -207595831 - L2 LINE L2 0 3313 3179 207 0 0 0 chr2 43092023 43092046 -207595808 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 323 291 40 54 chr2 43092046 43092058 -207595796 - L2 LINE L2 -134 3179 3168 3180 285 45 41 chr2 43092112 43093388 -207594466 - L2 LINE L2 -289 3024 1728 196 253 89 25 chr2 43093763 43093842 -207594012 - L2 LINE L2 -4 3309 3226 24 0 0 0 chr2 43094649 43094673 -207593181 + AT_rich Low_complexity Low_complexity 1 24 0 210 258 142 33 chr2 43094847 43094967 -207592887 - L2 LINE L2 -2 3311 3179 35 0 0 0 chr2 43095016 43095051 -207592803 + AT_rich Low_complexity Low_complexity 1 35 0 216 182 0 0 chr2 43095246 43095290 -207592564 + CT-rich Low_complexity Low_complexity 2 45 0 213 39 0 0 chr2 43095290 43095316 -207592538 + (CA)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr2 43097763 43097785 -207590069 + AT_rich Low_complexity Low_complexity 1 22 0 212 366 125 36 chr2 43098271 43098911 -207588943 - L2 LINE L2 -654 2660 1964 431 247 74 107 chr2 43099091 43099362 -207588492 + MLT1I LTR MaLR 63 300 -109 279 176 0 153 chr2 43099342 43099473 -207588381 + MLT1I LTR MaLR 317 541 -8 * 3265 127 8 21 chr2 43101755 43102276 -207585578 + MER75 DNA T2_type 1 514 0 27 29 0 0 chr2 43102479 43102513 -207585341 + AT_rich Low_complexity Low_complexity 1 34 0 272 284 147 18 chr2 43102884 43102993 -207584861 + L2 LINE L2 3142 3264 -8 2320 113 0 0 chr2 43103067 43103376 -207584478 - AluSx SINE Alu -3 309 1 1600 209 94 92 chr2 43103724 43104122 -207583732 - MLT1F1 LTR MaLR 0 567 141 2256 114 3 3 chr2 43104122 43104430 -207583424 + AluSx SINE Alu 3 310 -2 1600 209 94 92 chr2 43104430 43104562 -207583292 - MLT1F1 LTR MaLR -426 141 11 204 412 20 0 chr2 43105118 43105220 -207582634 + MER5A DNA MER1_type 13 116 -73 2016 181 31 28 chr2 43105897 43106452 -207581402 + MLT2A2 LTR ERVL 1 554 0 524 343 54 57 chr2 43106786 43107555 -207580299 - L2 LINE L2 -6 3307 2364 2178 157 98 3 chr2 43109525 43109914 -207577940 + MSTB LTR MaLR 1 426 0 281 235 59 12 chr2 43110338 43110423 -207577431 + MER5B DNA MER1_type 90 178 0 303 190 25 51 chr2 43110436 43110515 -207577339 + L1MC1 LINE L1 5194 5270 -876 4982 142 32 78 chr2 43110536 43111561 -207576293 + L1MC1 LINE L1 5356 6333 0 316 177 269 77 chr2 43111588 43111718 -207576136 + MER5A DNA MER1_type 9 163 -26 658 243 35 18 chr2 43112000 43112169 -207575685 + MER97c DNA MER1_type? 8 179 -911 180 327 220 31 chr2 43112630 43112789 -207575065 + MER5A DNA MER1_type 1 189 0 303 28 0 0 chr2 43113064 43113100 -207574754 + (CA)n Simple_repeat Simple_repeat 1 36 0 326 326 10 0 chr2 43113533 43113631 -207574223 + MIR3 SINE MIR 108 206 -2 362 96 84 12 chr2 43114044 43114127 -207573727 + L1MB4 LINE L1 6086 6174 -6 10442 212 36 53 chr2 43114877 43116589 -207571265 + L1P LINE L1 3 1640 -4506 2255 110 3 0 chr2 43116589 43116889 -207570965 + AluSx SINE Alu 1 301 -11 10442 212 36 53 chr2 43116889 43118213 -207569641 + L1P LINE L1 1640 2986 -3160 4867 49 0 0 chr2 43119088 43119680 -207568174 + L1PA4 LINE L1 5560 6151 -4 223 366 0 12 chr2 43120202 43120284 -207567570 + L2 LINE L2 3184 3264 -8 732 189 8 0 chr2 43120452 43120579 -207567275 + Tigger7 DNA MER2_type 2360 2487 0 24 53 0 0 chr2 43121164 43121202 -207566652 + AT_rich Low_complexity Low_complexity 1 38 0 1405 171 97 40 chr2 43122301 43122622 -207565232 + MER44D DNA MER2_type 1 609 0 25 0 0 0 chr2 43123475 43123500 -207564354 + AT_rich Low_complexity Low_complexity 1 25 0 181 198 23 23 chr2 43124093 43124179 -207563675 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 735 293 34 37 chr2 43125094 43125391 -207562463 + MLT1J LTR MaLR 216 511 0 1217 217 38 61 chr2 43126563 43126955 -207560899 - MLT2C1 LTR ERVL -2 395 13 243 390 21 0 chr2 43127750 43127845 -207560009 + MIR3 SINE MIR 73 169 -39 221 269 19 0 chr2 43127965 43128032 -207559822 + GA-rich Low_complexity Low_complexity 4 110 0 827 251 62 13 chr2 43128087 43128314 -207559540 - Charlie8 DNA MER1_type -2141 276 39 821 119 33 0 chr2 43128328 43128479 -207559375 + MER96B DNA MER1_type? 23 178 -239 238 272 155 60 chr2 43128740 43128972 -207558882 - MIR SINE MIR -3 259 6 190 320 107 25 chr2 43129832 43129954 -207557900 + L2 LINE L2 3179 3310 -3 2244 109 13 0 chr2 43131832 43132135 -207555719 - AluSx SINE Alu -5 307 1 27 49 0 0 chr2 43132528 43132569 -207555285 + AT_rich Low_complexity Low_complexity 1 41 0 198 167 0 0 chr2 43133188 43133224 -207554630 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1383 70 5 0 chr2 43133270 43133455 -207554399 - L1PB1 LINE L1 0 6151 5966 385 241 36 27 chr2 43133800 43133912 -207553942 + MIR3 SINE MIR 89 201 -7 1874 149 187 15 chr2 43134503 43134878 -207552976 + MSTB LTR MaLR 6 425 -1 371 211 49 84 chr2 43135428 43135570 -207552284 - MLT1J LTR MaLR -372 139 3 23 0 0 0 chr2 43136048 43136071 -207551783 + AT_rich Low_complexity Low_complexity 1 23 0 2016 160 68 27 chr2 43136210 43136648 -207551206 + MSTB2 LTR MaLR 1 456 -1 28 48 0 0 chr2 43136693 43136735 -207551119 + AT_rich Low_complexity Low_complexity 1 42 0 23 54 0 0 chr2 43136766 43136803 -207551051 + AT_rich Low_complexity Low_complexity 1 37 0 2114 126 0 16 chr2 43137147 43137464 -207550390 - AluSx SINE Alu 0 312 1 444 90 22 75 chr2 43137934 43138068 -207549786 + (GGAAA)n Simple_repeat Simple_repeat 4 130 0 244 262 84 0 chr2 43138085 43138192 -207549662 + L1MEd LINE L1 87 202 -5917 2571 43 0 3 chr2 43138683 43138983 -207548871 - AluY SINE Alu -12 299 1 21 36 0 0 chr2 43139057 43139085 -207548769 + AT_rich Low_complexity Low_complexity 1 28 0 570 292 35 67 chr2 43140015 43140330 -207547524 - L2 LINE L2 0 3313 3009 311 333 54 0 chr2 43140652 43140763 -207547091 - L2 LINE L2 -7 3306 3190 913 274 0 5 chr2 43140794 43141009 -207546845 - MIR SINE MIR -26 236 23 25 51 0 0 chr2 43141484 43141523 -207546331 + AT_rich Low_complexity Low_complexity 1 39 0 183 279 157 76 chr2 43142563 43142735 -207545119 + MIR SINE MIR 9 194 -68 1744 193 25 50 chr2 43143455 43143778 -207544076 - MSTD LTR MaLR -6 390 77 2215 99 7 0 chr2 43143778 43144071 -207543783 + AluSg SINE Alu 1 295 -15 1744 193 25 50 chr2 43144071 43144147 -207543707 - MSTD LTR MaLR -319 77 1 1281 199 75 126 chr2 43144188 43144251 -207543603 - MLT1D LTR MaLR 0 505 440 410 35 0 0 chr2 43144251 43144308 -207543546 + L1MA7 LINE L1 6235 6291 0 1281 199 75 126 chr2 43144308 43144456 -207543398 - MLT1D LTR MaLR -65 440 286 2467 63 0 0 chr2 43144456 43144759 -207543095 + AluY SINE Alu 1 303 -8 1281 199 75 126 chr2 43144759 43145078 -207542776 - MLT1D LTR MaLR -219 286 1 415 321 43 22 chr2 43145108 43145292 -207542562 + L2 LINE L2 2634 2821 -493 2023 135 3 7 chr2 43145306 43145610 -207542244 - AluSq SINE Alu -10 303 1 277 272 153 61 chr2 43145613 43145841 -207542013 + MER112 DNA MER1_type 12 260 0 406 313 180 39 chr2 43145841 43146247 -207541607 + L2 LINE L2 2851 3313 0 23 54 0 0 chr2 43146310 43146347 -207541507 + AT_rich Low_complexity Low_complexity 1 37 0 396 323 126 6 chr2 43146361 43146528 -207541326 - MIR SINE MIR -2 260 74 * 410 262 77 28 chr2 43146526 43146726 -207541128 - MIR SINE MIR 0 262 16 206 256 81 0 chr2 43146736 43146822 -207541032 + MER5A DNA MER1_type 4 96 -93 1644 267 63 70 chr2 43146917 43147476 -207540378 - HAL1b LINE L1 -186 1162 613 2127 122 0 3 chr2 43147476 43147770 -207540084 - AluSg SINE Alu -15 295 3 1644 267 63 70 chr2 43147770 43148327 -207539527 - HAL1b LINE L1 -735 613 54 646 335 38 8 chr2 43149315 43149554 -207538300 + MIR SINE MIR 17 262 0 1693 200 32 22 chr2 43149559 43149929 -207537925 - MLT1A2 LTR MaLR 0 374 1 859 288 102 11 chr2 43150124 43150409 -207537445 - L2 LINE L2 0 3313 3003 251 341 188 5 chr2 43150465 43150673 -207537181 - L2 LINE L2 -407 2907 2662 485 294 87 26 chr2 43151273 43151504 -207536350 + MIR SINE MIR 12 256 -6 232 280 119 36 chr2 43151747 43151915 -207535939 - L2 LINE L2 -832 2482 2301 355 305 165 47 chr2 43152020 43152299 -207535555 - L2 LINE L2 -343 2971 2660 228 315 16 39 chr2 43152312 43152439 -207535415 + L1MEd LINE L1 27 150 -5969 2295 175 56 123 chr2 43152594 43153610 -207534244 - L1MA10 LINE L1 -603 5694 4744 3048 148 46 28 chr2 43153612 43154226 -207533628 + L1MA10 LINE L1 5710 6334 0 1913 146 3 3 chr2 43154309 43154604 -207533250 + AluSc SINE Alu 5 299 -10 465 242 104 43 chr2 43154669 43154995 -207532859 - LTR37B LTR ERV1 -9 459 114 * 647 161 24 24 chr2 43154992 43155116 -207532738 - MER3 DNA MER1_type -76 133 10 2563 49 3 0 chr2 43155145 43155452 -207532402 + AluY SINE Alu 1 308 -3 2422 91 0 0 chr2 43155476 43155785 -207532069 - AluSg SINE Alu -1 309 1 457 133 29 105 chr2 43155785 43155890 -207531964 - LTR37B LTR ERV1 -371 97 1 281 260 87 29 chr2 43155964 43156068 -207531786 + L1MEd LINE L1 498 607 -5512 314 363 59 0 chr2 43156546 43156681 -207531173 + MIR SINE MIR 49 191 -71 1788 157 28 0 chr2 43156691 43157010 -207530844 + L1MA5 LINE L1 5973 6300 0 358 321 38 13 chr2 43157154 43157313 -207530541 - L1M4 LINE L1 -3313 4252 4090 253 300 93 52 chr2 43157432 43157852 -207530002 - L1M4 LINE L1 -3600 3965 3529 1784 155 0 35 chr2 43158021 43158331 -207529523 - AluJb SINE Alu -11 301 3 566 310 78 35 chr2 43158406 43159043 -207528811 - L1ME3A LINE L1 -241 5929 5254 474 276 62 26 chr2 43159328 43159668 -207528186 - L1ME3A LINE L1 -1524 4622 4271 6247 174 27 4 chr2 43159676 43161514 -207526340 - L1MC1 LINE L1 -20 6296 4413 420 268 71 6 chr2 43161529 43161712 -207526142 - L1MC1 LINE L1 -2154 3975 3781 1437 146 8 20 chr2 43162072 43162318 -207525536 - AluSg/x SINE Alu -3 307 65 1984 140 0 59 chr2 43162395 43162751 -207525103 + MER1B DNA MER1_type 1 335 -2 227 324 50 11 chr2 43162959 43163138 -207524716 - L1M4 LINE L1 -4564 3001 2816 22 35 0 0 chr2 43163250 43163279 -207524575 + AT_rich Low_complexity Low_complexity 1 29 0 1768 168 0 14 chr2 43163344 43163641 -207524213 + AluSx SINE Alu 3 295 -17 424 272 43 47 chr2 43163656 43163891 -207523963 - L1MC1 LINE L1 -4990 1129 896 234 0 0 0 chr2 43164548 43164574 -207523280 + (TG)n Simple_repeat Simple_repeat 2 27 0 597 294 44 66 chr2 43166326 43166564 -207521290 - MARNA DNA Mariner -52 534 292 2116 84 0 0 chr2 43166564 43166837 -207521017 + AluY SINE Alu 35 307 -4 597 294 44 66 chr2 43166837 43167095 -207520759 - MARNA DNA Mariner -294 292 49 1252 171 44 0 chr2 43167535 43167786 -207520068 - L1MA9 LINE L1 0 6312 6051 220 222 28 0 chr2 43168136 43168208 -207519646 + (TA)n Simple_repeat Simple_repeat 2 75 0 240 86 0 0 chr2 43168249 43168284 -207519570 + (TG)n Simple_repeat Simple_repeat 2 36 0 613 201 178 67 chr2 43169656 43170043 -207517811 + MLT1E2 LTR MaLR 90 563 -61 189 252 92 84 chr2 43170063 43170182 -207517672 - MIR SINE MIR -139 123 4 596 275 29 74 chr2 43170540 43170784 -207517070 + MIR SINE MIR 8 240 -22 398 107 48 19 chr2 43170865 43170968 -207516886 + (TA)n Simple_repeat Simple_repeat 2 107 0 401 261 58 36 chr2 43171057 43171195 -207516659 - MER5A DNA MER1_type 0 189 49 310 340 39 26 chr2 43171059 43171212 -207516642 + MER5A DNA MER1_type 17 171 -18 * 256 200 0 0 chr2 43171759 43171809 -207516045 + MER69 DNA AcHobo 86 135 -2391 234 326 23 23 chr2 43173021 43173107 -207514747 - L2 LINE L2 -53 3219 3134 245 314 70 22 chr2 43173174 43173332 -207514522 + MIR SINE MIR 20 182 -66 326 290 121 45 chr2 43173956 43174512 -207513342 + L2 LINE L2 2626 3224 -89 2085 115 4 0 chr2 43174727 43175005 -207512849 - AluSg SINE Alu -31 279 1 275 406 57 11 chr2 43175178 43175461 -207512393 - L2 LINE L2 -620 2694 2399 320 273 61 30 chr2 43176409 43176508 -207511346 - MIR SINE MIR -70 138 37 388 350 32 38 chr2 43178111 43178425 -207509429 + L2 LINE L2 2162 2473 -841 3854 185 48 5 chr2 43178630 43179586 -207508268 + L1MD2 LINE L1 5133 6129 -230 909 126 0 30 chr2 43179588 43179723 -207508131 + FLAM_C SINE Alu 3 133 -10 563 294 13 35 chr2 43179733 43179961 -207507893 + L1MD2 LINE L1 6119 6341 -18 2365 153 45 41 chr2 43180451 43180916 -207506938 - MLT1C LTR MaLR 0 467 1 2667 148 18 11 chr2 43181429 43181883 -207505971 - LTR32 LTR ERVL 0 471 15 2047 75 14 3 chr2 43182709 43183002 -207504852 + L1PA14 LINE L1 5865 6160 -1 231 349 36 12 chr2 43184088 43184171 -207503683 - L2 LINE L2 -5 3267 3183 207 0 0 0 chr2 43185161 43185184 -207502670 + (CAT)n Simple_repeat Simple_repeat 1 23 0 650 268 105 5 chr2 43185184 43185393 -207502461 - MIR SINE MIR -8 254 25 1678 182 67 21 chr2 43185813 43186186 -207501668 - MLT1B LTR MaLR 0 390 1 5774 110 80 0 chr2 43186754 43187732 -207500122 - L1PA14 LINE L1 -2 6159 5162 285 330 15 64 chr2 43188551 43188719 -207499135 - MER91 DNA MER1_type 0 190 41 285 51 0 0 chr2 43188782 43188821 -207499033 + (CA)n Simple_repeat Simple_repeat 1 39 0 581 263 122 5 chr2 43189061 43189274 -207498580 + Charlie1 DNA MER1_type 1 238 -2523 * 663 191 7 0 chr2 43189257 43189398 -207498456 + Charlie1 DNA MER1_type 2620 2761 0 338 281 49 0 chr2 43189526 43189608 -207498246 + MIR SINE MIR 29 114 -148 185 294 150 31 chr2 43190299 43190459 -207497395 - L3 LINE CR1 -27 1550 1372 285 93 0 0 chr2 43190881 43190935 -207496919 - Charlie5 DNA MER1_type -87 2525 2472 21 89 0 0 chr2 43191209 43191265 -207496589 + AT_rich Low_complexity Low_complexity 1 56 0 2071 109 3 3 chr2 43192269 43192583 -207495271 + AluSq SINE Alu 1 314 0 990 197 133 0 chr2 43192811 43193090 -207494764 + MER33 DNA MER1_type 4 319 -5 23 0 0 0 chr2 43193320 43193343 -207494511 + AT_rich Low_complexity Low_complexity 1 23 0 2671 36 0 0 chr2 43193511 43193816 -207494038 + AluYa5 SINE Alu 1 305 -6 194 281 35 0 chr2 43194223 43194280 -207493574 - L2 LINE L2 0 3313 3255 518 277 92 62 chr2 43194374 43194904 -207492950 - L2 LINE L2 -64 3249 2701 1633 149 16 0 chr2 43195018 43195260 -207492594 + AluJo SINE Alu 1 246 -66 399 309 91 19 chr2 43195453 43195663 -207492191 - MIR SINE MIR -14 248 24 26 30 0 0 chr2 43196330 43196363 -207491491 + AT_rich Low_complexity Low_complexity 1 33 0 304 223 78 10 chr2 43196967 43197070 -207490784 - MLT1J2 LTR MaLR -340 110 1 1838 175 3 0 chr2 43197318 43197615 -207490239 + AluJb SINE Alu 1 298 -14 224 370 66 28 chr2 43198023 43198204 -207489650 + L3 LINE CR1 1377 1564 -13 26 62 0 15 chr2 43199499 43199525 -207488329 + AT_rich Low_complexity Low_complexity 1 26 -38 2080 136 0 0 chr2 43199525 43199820 -207488034 + AluSx SINE Alu 5 299 -13 26 62 0 15 chr2 43199820 43199858 -207487996 + AT_rich Low_complexity Low_complexity 26 64 0 245 250 47 0 chr2 43200065 43200129 -207487725 + MLT1L LTR MaLR 2 68 -547 24 0 0 0 chr2 43200218 43200242 -207487612 + AT_rich Low_complexity Low_complexity 1 24 0 210 266 0 31 chr2 43200261 43200325 -207487529 + GA-rich Low_complexity Low_complexity 4 65 0 189 314 100 0 chr2 43200345 43200415 -207487439 + MIR SINE MIR 34 110 -98 334 328 109 29 chr2 43200447 43200621 -207487233 - MIR SINE MIR -51 211 24 191 264 111 0 chr2 43200672 43200744 -207487110 + MIR SINE MIR 105 184 -78 1194 246 120 5 chr2 43200825 43201216 -207486638 - MLT1H LTR MaLR -113 436 1 742 203 17 23 chr2 43201904 43202081 -207485773 + MER5B DNA MER1_type 1 176 -2 482 271 124 49 chr2 43202219 43202444 -207485410 + MIR SINE MIR 8 249 -13 389 208 179 98 chr2 43203157 43203229 -207484625 + L2 LINE L2 3127 3192 -121 981 210 36 18 chr2 43203229 43203448 -207484406 + MER58A DNA MER1_type 2 224 0 389 208 179 98 chr2 43203448 43203548 -207484306 + L2 LINE L2 3192 3313 0 345 271 10 0 chr2 43203649 43203745 -207484109 - MIR3 SINE MIR -23 185 89 232 306 45 45 chr2 43204455 43204589 -207483265 - L2 LINE L2 -1 3312 3179 261 0 0 0 chr2 43204963 43204992 -207482862 + (A)n Simple_repeat Simple_repeat 1 29 0 502 301 164 11 chr2 43205028 43205211 -207482643 - L3 LINE CR1 -28 1549 1339 258 271 60 126 chr2 43205874 43206025 -207481829 + L3 LINE CR1 4 144 -1433 604 196 196 22 chr2 43206248 43206427 -207481427 - MIR SINE MIR -22 240 31 335 208 52 0 chr2 43207094 43207171 -207480683 + MER112 DNA MER1_type 6 86 -174 225 0 0 0 chr2 43207577 43207602 -207480252 + (CA)n Simple_repeat Simple_repeat 2 26 0 209 271 0 0 chr2 43208533 43208581 -207479273 + GA-rich Low_complexity Low_complexity 2 49 0 804 193 0 0 chr2 43208816 43208961 -207478893 + MER3 DNA MER1_type 2 146 -63 201 316 239 0 chr2 43208980 43209097 -207478757 - MIR3 SINE MIR -52 156 12 216 91 45 23 chr2 43209222 43209266 -207478588 + T-rich Low_complexity Low_complexity 3 47 0 237 279 98 68 chr2 43209489 43209715 -207478139 + MIR SINE MIR 20 252 -10 315 302 216 0 chr2 43210488 43210604 -207477250 - MIR3 SINE MIR -9 199 59 291 344 11 0 chr2 43210617 43210707 -207477147 + MER81 DNA DNA 1 91 -23 468 182 57 0 chr2 43210717 43210805 -207477049 + MER81 DNA DNA 22 114 0 291 338 50 12 chr2 43211567 43211727 -207476127 - MIR SINE MIR -36 226 61 261 0 0 0 chr2 43215553 43215582 -207472272 + (A)n Simple_repeat Simple_repeat 1 29 0 403 271 47 18 chr2 43216188 43216358 -207471496 - MER104 DNA MER2_type -1 179 5 372 353 37 0 chr2 43216422 43216558 -207471296 + MLT1I LTR MaLR 81 221 -188 1632 115 138 15 chr2 43216678 43216938 -207470916 - AluSx SINE Alu -20 292 1 686 189 23 0 chr2 43216990 43217122 -207470732 + AluJo SINE Alu 2 136 -176 328 206 0 41 chr2 43217126 43217199 -207470655 + MLT1I LTR MaLR 336 405 -4 4635 22 0 0 chr2 43217300 43217833 -207470021 - L1P LINE L1 -1634 4512 3980 7253 43 6 1 chr2 43217833 43219126 -207468728 + L1PA4 LINE L1 4863 6136 -19 221 323 21 54 chr2 43219126 43219219 -207468635 - MIR SINE MIR -81 127 38 1837 134 0 4 chr2 43219423 43219684 -207468170 + AluSq SINE Alu 1 260 -53 5415 161 21 24 chr2 43221830 43222072 -207465782 + L1PB3 LINE L1 4808 5049 -1105 1785 159 85 23 chr2 43222072 43222425 -207465429 + THE1C LTR MaLR 1 375 0 5415 161 21 24 chr2 43222425 43222784 -207465070 + L1PB3 LINE L1 5049 5407 -747 2138 109 46 60 chr2 43222784 43223151 -207464703 + THE1B LTR MaLR 1 362 -2 5415 161 21 24 chr2 43223151 43223902 -207463952 + L1PB3 LINE L1 5407 6147 -7 29 0 0 0 chr2 43223902 43223931 -207463923 + AT_rich Low_complexity Low_complexity 1 29 0 665 50 0 20 chr2 43224070 43224169 -207463685 + (TCTCCC)n Simple_repeat Simple_repeat 1 97 0 7008 63 18 55 chr2 43224169 43226749 -207461105 + SVA Other Other 57 1386 0 432 301 157 0 chr2 43226946 43227099 -207460755 - MLT1J2 LTR MaLR -267 183 7 270 159 143 16 chr2 43227286 43227349 -207460505 + MER103 DNA DNA 13 83 -83 1262 128 25 0 chr2 43227546 43227742 -207460112 + L1PB4 LINE L1 5766 5966 -190 273 331 0 0 chr2 43228308 43228429 -207459425 + (CATATA)n Simple_repeat Simple_repeat 6 126 0 350 214 48 0 chr2 43228430 43228514 -207459340 + L1MC4 LINE L1 6613 6700 -1342 498 245 0 42 chr2 43228515 43228804 -207459050 + (CATATA)n Simple_repeat Simple_repeat 1 276 0 392 292 49 7 chr2 43228995 43229139 -207458715 - L2 LINE L2 0 3313 3164 1306 257 85 19 chr2 43229747 43230384 -207457470 - L1ME3A LINE L1 -344 5826 5151 1309 215 116 53 chr2 43230487 43231123 -207456731 - L1MC5 LINE L1 -26 7935 7260 1050 206 60 108 chr2 43231283 43231748 -207456106 - L1MC5 LINE L1 -746 7215 6773 643 181 57 105 chr2 43231751 43231961 -207455893 + LTR16A1 LTR ERVL 4 203 -254 270 0 0 0 chr2 43232083 43232113 -207455741 + (CA)n Simple_repeat Simple_repeat 2 31 0 532 289 13 0 chr2 43232118 43232277 -207455577 + LTR16A1 LTR ERVL 297 457 0 2435 77 0 3 chr2 43232487 43232784 -207455070 - AluY SINE Alu -15 296 1 2113 113 0 21 chr2 43232784 43233075 -207454779 - AluSx SINE Alu -5 307 23 280 244 222 0 chr2 43233850 43233940 -207453914 + L2 LINE L2 3200 3309 -4 1590 245 43 19 chr2 43234284 43234700 -207453154 + L1MCb LINE L1 3 428 -5617 * 6515 151 52 103 chr2 43234698 43234950 -207452904 + L1MC3 LINE L1 6102 6365 -1420 3000 119 117 0 chr2 43234950 43235419 -207452435 - MER1A DNA MER1_type 0 527 4 6515 151 52 103 chr2 43235419 43235671 -207452183 + L1MC3 LINE L1 6365 6628 -1157 441 73 0 0 chr2 43235671 43235726 -207452128 - Charlie3 DNA MER1_type -4 2706 2652 6515 151 52 103 chr2 43235726 43236813 -207451041 + L1MC3 LINE L1 6628 7663 -122 1098 100 13 0 chr2 43236813 43236963 -207450891 - THE1B LTR MaLR 0 364 213 462 113 188 0 chr2 43236950 43237030 -207450824 - THE1B LTR MaLR -268 96 2 * 515 171 103 17 chr2 43237031 43237148 -207450706 + L1MC3 LINE L1 7659 7785 0 349 343 61 24 chr2 43237714 43237927 -207449927 - MLT1K LTR MaLR -358 230 10 302 296 35 9 chr2 43238320 43238435 -207449419 + MIR3 SINE MIR 43 160 -48 283 266 62 53 chr2 43238591 43238704 -207449150 + L2 LINE L2 3158 3271 -1 2382 127 85 10 chr2 43239409 43239811 -207448043 + MSTB1 LTR MaLR 1 432 0 491 274 14 55 chr2 43240311 43240479 -207447375 - MIR SINE MIR -54 208 50 311 272 88 18 chr2 43241877 43241991 -207445863 - MIR SINE MIR -78 184 63 * 3656 260 117 21 chr2 43241968 43243379 -207444475 - L2 LINE L2 -475 2839 1293 1986 165 0 19 chr2 43243822 43244138 -207443716 + AluSg SINE Alu 1 310 0 245 200 0 0 chr2 43244721 43244766 -207443088 - MLT1E LTR MaLR 0 567 523 2254 125 3 0 chr2 43244794 43245106 -207442748 + AluSq SINE Alu 1 313 0 1463 181 70 0 chr2 43245117 43245376 -207442478 - AluJo SINE Alu -30 282 6 1331 241 88 60 chr2 43245383 43245460 -207442394 - MLT1E LTR MaLR -37 556 483 1867 146 4 0 chr2 43245460 43245765 -207442089 - AluSg SINE Alu 0 306 1 1331 241 88 60 chr2 43245765 43246221 -207441633 - MLT1E LTR MaLR -110 483 7 294 281 112 15 chr2 43248042 43248238 -207439616 + L2 LINE L2 1795 2009 -1305 1725 61 61 0 chr2 43249702 43249930 -207437924 + L1PA5 LINE L1 5911 6152 -2 415 256 60 36 chr2 43251153 43251250 -207436604 + MIR SINE MIR 72 176 -86 1165 219 0 0 chr2 43251250 43251469 -207436385 - MER20 DNA MER1_type 0 219 1 415 256 60 36 chr2 43251469 43251539 -207436315 + MIR SINE MIR 176 243 -19 925 309 46 59 chr2 43252043 43252754 -207435100 - L3 LINE CR1 -163 1414 713 831 212 42 60 chr2 43252837 43252973 -207434881 + MER58A DNA MER1_type 10 142 -2278 2341 116 3 0 chr2 43252973 43253283 -207434571 + AluSp SINE Alu 1 311 -2 831 212 42 60 chr2 43253283 43253363 -207434491 + MER58A DNA MER1_type 142 222 -2 2260 172 16 35 chr2 43254192 43254623 -207433231 + MSTB LTR MaLR 1 423 -3 430 284 55 0 chr2 43254777 43254904 -207432950 + MIR SINE MIR 119 252 -10 500 226 36 36 chr2 43255254 43255422 -207432432 - MLT1J LTR MaLR -16 495 328 676 191 38 8 chr2 43255430 43255561 -207432293 + MER5A DNA MER1_type 21 155 -34 257 311 83 83 chr2 43255596 43255873 -207431981 - MLT1J LTR MaLR -234 277 1 739 229 33 38 chr2 43256869 43257109 -207430745 - MIR SINE MIR -16 246 8 23 33 0 0 chr2 43257255 43257285 -207430569 + AT_rich Low_complexity Low_complexity 1 30 0 1296 184 105 113 chr2 43257581 43258096 -207429758 - MER67D LTR ERV1 -1 513 3 1147 277 74 32 chr2 43258820 43259185 -207428669 + LTR26 LTR ERV1 55 440 -163 1864 134 22 0 chr2 43259185 43259453 -207428401 + AluSx SINE Alu 30 303 -9 1147 277 74 32 chr2 43259453 43259491 -207428363 + LTR26 LTR ERV1 440 475 -128 782 340 75 62 chr2 43259830 43261005 -207426849 + PABL_B-int LTR ERV1 2654 3843 -3279 210 292 0 56 chr2 43261304 43261393 -207426461 - MIR3 SINE MIR -3 205 122 368 232 30 30 chr2 43261780 43261879 -207425975 + L1MC5 LINE L1 7828 7926 -35 1946 161 3 0 chr2 43262026 43262325 -207425529 + AluJo SINE Alu 6 305 -7 508 273 25 0 chr2 43262344 43262465 -207425389 + MER5B DNA MER1_type 53 176 -2 198 0 0 0 chr2 43263226 43263248 -207424606 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 438 292 89 12 chr2 43263311 43263479 -207424375 - MIR3 SINE MIR -24 184 4 307 235 156 84 chr2 43264326 43264505 -207423349 + L2 LINE L2 3122 3313 0 248 250 18 0 chr2 43265081 43265137 -207422717 + GA-rich Low_complexity Low_complexity 5 61 0 3704 30 0 101 chr2 43265474 43266009 -207421845 + L1PA4 LINE L1 5675 6155 0 186 366 12 0 chr2 43266271 43266353 -207421501 - MIR SINE MIR 0 262 180 579 161 195 0 chr2 43266353 43266471 -207421383 + MLT1J LTR MaLR 1 141 -370 273 297 23 86 chr2 43267070 43267198 -207420656 - MIR SINE MIR -96 166 47 212 240 0 20 chr2 43267600 43267650 -207420204 + MIR SINE MIR 69 117 -91 436 298 86 41 chr2 43268585 43268830 -207419024 - MIR SINE MIR -6 256 1 276 296 17 81 chr2 43268919 43269091 -207418763 + MLT1L LTR MaLR 1 161 -454 206 207 35 17 chr2 43269196 43269254 -207418600 + CT-rich Low_complexity Low_complexity 2 60 0 441 293 24 6 chr2 43269368 43269535 -207418319 + MLT1L LTR MaLR 444 613 -2 2026 156 25 3 chr2 43269645 43270003 -207417851 - MER47A DNA MER2_type 0 366 1 677 205 0 0 chr2 43270927 43271039 -207416815 - MER81 DNA DNA 0 114 3 1104 224 5 0 chr2 43271941 43272155 -207415699 + MER20B DNA MER1_type 1 215 -4 1709 162 0 11 chr2 43272418 43272690 -207415164 - AluJb SINE Alu 0 312 44 332 91 0 0 chr2 43272841 43272885 -207414969 + U6 snRNA snRNA 1 44 -63 21 57 0 0 chr2 43272962 43272997 -207414857 + AT_rich Low_complexity Low_complexity 1 35 0 4367 171 70 66 chr2 43273829 43275043 -207412811 - L1MC2 LINE L1 -14 6748 5551 1671 194 3 10 chr2 43275043 43275353 -207412501 + AluSx SINE Alu 1 308 -4 4367 171 70 66 chr2 43275353 43275715 -207412139 - L1MC2 LINE L1 -1211 5551 5192 955 157 34 60 chr2 43275722 43275957 -207411897 + MER46A DNA MER2_type 8 236 0 8063 229 50 14 chr2 43275957 43276455 -207411399 - L1MC2 LINE L1 -1371 5193 4714 2425 83 0 0 chr2 43276455 43276756 -207411098 - AluY SINE Alu -10 301 1 8063 229 50 14 chr2 43276756 43277047 -207410807 - L1MC2 LINE L1 -1850 4714 4435 1854 163 49 69 chr2 43277047 43277513 -207410341 - MSTB2 LTR MaLR 0 457 1 8063 229 50 14 chr2 43277513 43277731 -207410123 - L1MC2 LINE L1 -2129 4435 4226 7854 130 19 9 chr2 43277731 43279016 -207408838 + HSMAR2 DNA Mariner 4 1301 -1 8063 229 50 14 chr2 43279016 43280893 -207406961 - L1MC2 LINE L1 -2338 4226 2203 2693 194 78 79 chr2 43280916 43282219 -207405635 - L1MC2 LINE L1 -4850 1195 1 6050 92 42 0 chr2 43283178 43284680 -207403174 + L1PA11 LINE L1 4623 6166 -8 1650 272 52 14 chr2 43285334 43285830 -207402024 + MLT2E LTR ERVL 1 515 -113 902 225 45 0 chr2 43285887 43286087 -207401767 - MER63A DNA MER1_type -1 209 1 917 79 36 0 chr2 43286346 43286485 -207401369 + L1MA2 LINE L1 5806 5949 -355 226 316 152 32 chr2 43286515 43286765 -207401089 + HAL1b LINE L1 366 645 -703 387 0 0 0 chr2 43287073 43287116 -207400738 + (TG)n Simple_repeat Simple_repeat 2 44 0 1016 145 0 0 chr2 43287121 43287266 -207400588 - AluSq SINE Alu -35 278 134 1099 288 35 44 chr2 43287375 43287827 -207400027 - LTR16A1 LTR ERVL 0 457 10 237 305 0 0 chr2 43287910 43287992 -207399862 + L1MA10 LINE L1 4765 4846 -1300 308 210 0 0 chr2 43287993 43288055 -207399799 - L1MC4 LINE L1 -1339 6703 6642 5186 175 30 8 chr2 43288060 43289509 -207398345 + L1MA10 LINE L1 4848 6327 -7 275 310 47 15 chr2 43289544 43290026 -207397828 + L1 LINE L1 2266 2762 -3384 1602 256 100 24 chr2 43290054 43290248 -207397606 + MLT1E LTR MaLR 1 179 -414 2311 172 24 7 chr2 43290248 43290667 -207397187 + MSTB LTR MaLR 1 426 0 1602 256 100 24 chr2 43290667 43291023 -207396831 + MLT1E LTR MaLR 179 593 0 1342 241 28 23 chr2 43291023 43291558 -207396296 + MLT1E-int LTR MaLR 15 663 -708 335 349 18 12 chr2 43291670 43291836 -207396018 + MLT1E-int LTR MaLR 692 858 -513 223 232 29 0 chr2 43292228 43292297 -207395557 + (TA)n Simple_repeat Simple_repeat 2 72 0 521 150 16 31 chr2 43292307 43292434 -207395420 + L1MC4 LINE L1 7918 8042 0 291 176 139 19 chr2 43292578 43292686 -207395168 + L1MC5 LINE L1 7807 7927 -34 2163 117 7 3 chr2 43292694 43292985 -207394869 + AluSx SINE Alu 1 292 -20 220 167 0 0 chr2 43293100 43293136 -207394718 - MIR SINE MIR -108 154 119 266 328 26 35 chr2 43293994 43294110 -207393744 + MER5B DNA MER1_type 61 175 -3 648 274 174 56 chr2 43294157 43294570 -207393284 - L2 LINE L2 0 3272 2811 318 226 17 70 chr2 43295083 43295198 -207392656 - MIR3 SINE MIR -24 184 76 1425 223 111 29 chr2 43295508 43296059 -207391795 - MER20B DNA MER1_type -1 782 187 1800 244 29 5 chr2 43296066 43296327 -207391527 + L1MD1 LINE L1 89 365 -6175 1683 113 0 32 chr2 43296327 43296575 -207391279 + AluSq SINE Alu 63 302 -11 1800 244 29 5 chr2 43296575 43296731 -207391123 + L1MD1 LINE L1 365 516 -6024 * 1900 149 45 0 chr2 43296719 43297095 -207390759 + L1MD1 LINE L1 1664 2056 -4484 716 131 37 0 chr2 43297102 43297209 -207390645 + AluSc SINE Alu 166 276 -33 813 127 13 13 chr2 43297212 43297370 -207390484 + GA-rich Low_complexity Low_complexity 3 160 0 1552 170 47 87 chr2 43297372 43297944 -207389910 + L1MD1 LINE L1 2011 2559 -3981 2343 96 0 10 chr2 43299071 43299383 -207388471 - AluSq SINE Alu -4 309 1 2744 247 30 8 chr2 43299973 43300845 -207387009 + L1MD1 LINE L1 2656 3546 -2994 * 5482 202 50 38 chr2 43300835 43302774 -207385080 + L1MD1 LINE L1 3901 5878 -758 2210 132 0 0 chr2 43302774 43303070 -207384784 + AluSx SINE Alu 3 298 -14 5482 202 50 38 chr2 43303070 43303833 -207384021 + L1MD1 LINE L1 5878 6630 -6 262 218 113 98 chr2 43303866 43303999 -207383855 - MER20B DNA MER1_type -591 192 58 246 313 52 26 chr2 43304071 43304186 -207383668 - MIR SINE MIR -84 178 61 22 0 0 0 chr2 43304264 43304286 -207383568 + AT_rich Low_complexity Low_complexity 1 22 0 992 313 183 37 chr2 43304376 43305938 -207381916 + L2 LINE L2 1437 3228 -44 25 31 0 0 chr2 43306402 43306434 -207381420 + AT_rich Low_complexity Low_complexity 1 32 0 356 295 121 32 chr2 43307316 43307506 -207380348 + MIR SINE MIR 47 253 -9 187 27 27 54 chr2 43309454 43309491 -207378363 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 1911 188 10 35 chr2 43309984 43310384 -207377470 - MLT1B LTR MaLR 0 390 1 730 277 98 29 chr2 43310885 43311232 -207376622 + MLT1J2 LTR MaLR 59 429 -21 867 199 39 0 chr2 43311364 43311520 -207376334 + FRAM SINE Alu 1 162 -4 196 283 130 33 chr2 43311708 43311800 -207376054 + MIR SINE MIR 17 117 -91 198 289 0 0 chr2 43311892 43311944 -207375910 + L2 LINE L2 3261 3312 -1 266 274 104 28 chr2 43312259 43312365 -207375489 + L2 LINE L2 3195 3308 -5 1385 285 99 60 chr2 43313247 43314124 -207373730 - L2 LINE L2 -405 2909 1999 497 294 19 12 chr2 43315506 43315666 -207372188 + MER5A DNA MER1_type 1 161 -28 237 276 10 31 chr2 43316078 43316176 -207371678 - MIR SINE MIR -3 259 164 653 210 64 0 chr2 43316412 43316442 -207371412 - L1MA10 LINE L1 -4 6330 6301 1063 243 26 31 chr2 43316442 43316792 -207371062 - L1ME1 LINE L1 -31 6135 5788 260 271 51 68 chr2 43317612 43317730 -207370124 - MIR SINE MIR -64 144 33 354 223 194 22 chr2 43318265 43318404 -207369450 - MIR SINE MIR 0 262 100 1878 166 13 0 chr2 43318474 43318775 -207369079 - AluJb SINE Alu -1 311 7 456 239 52 8 chr2 43318827 43318961 -207368893 - MIR SINE MIR -15 247 108 553 233 92 25 chr2 43319960 43320123 -207367731 + MIR SINE MIR 89 262 0 279 296 96 24 chr2 43320316 43320441 -207367413 + MIR SINE MIR 46 179 -83 245 160 20 0 chr2 43320543 43320593 -207367261 - MIR SINE MIR -50 212 162 361 80 0 0 chr2 43322314 43322364 -207365490 - AluSp/q SINE Alu -6 297 248 326 261 267 15 chr2 43322418 43322613 -207365241 + L1ME LINE L1 5533 5776 -345 247 279 51 0 chr2 43322788 43322867 -207364987 - MIR SINE MIR -131 131 49 2685 84 19 84 chr2 43323198 43323598 -207364256 + MLT2A1 LTR ERVL 1 367 -77 562 13 13 13 chr2 43323598 43323674 -207364180 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 2685 84 19 84 chr2 43323674 43323748 -207364106 + MLT2A1 LTR ERVL 367 444 0 204 67 0 0 chr2 43324141 43324171 -207363683 + (TC)n Simple_repeat Simple_repeat 2 31 0 390 225 158 17 chr2 43324253 43324373 -207363481 + MLT1J LTR MaLR 42 178 -333 396 258 140 27 chr2 43324459 43324645 -207363209 + MLT1J LTR MaLR 301 507 -4 1991 123 49 0 chr2 43324867 43325151 -207362703 - AluSx SINE Alu -14 298 1 251 283 53 19 chr2 43325706 43325887 -207361967 - MIR SINE MIR -2 260 27 1918 141 22 0 chr2 43325891 43326200 -207361654 - AluJo SINE Alu 0 315 1 619 202 59 127 chr2 43326286 43326539 -207361315 + MER106A DNA MER1_type 1 236 0 188 280 53 0 chr2 43326696 43326771 -207361083 - MIR SINE MIR -80 182 104 2203 112 7 0 chr2 43327226 43327520 -207360334 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr2 43327667 43327703 -207360151 + AT_rich Low_complexity Low_complexity 1 36 0 188 304 22 54 chr2 43328109 43328201 -207359653 + MIR3 SINE MIR 99 187 -21 290 185 46 0 chr2 43328206 43328271 -207359583 + MIR3 SINE MIR 131 198 -10 * 340 273 57 0 chr2 43328268 43328356 -207359498 - MIR3 SINE MIR -35 173 81 279 325 13 13 chr2 43330290 43330441 -207357413 + MER5B DNA MER1_type 10 160 -18 619 226 55 167 chr2 43330453 43330707 -207357147 + L1MC4 LINE L1 7414 7695 -347 2365 104 10 0 chr2 43330707 43331016 -207356838 + AluSx SINE Alu 1 312 0 619 226 55 167 chr2 43331016 43331397 -207356457 + L1MC4 LINE L1 7695 7978 -64 1614 161 4 18 chr2 43331415 43331688 -207356166 - AluJo SINE Alu -16 296 28 712 220 62 0 chr2 43331959 43332136 -207355718 - MER5A DNA MER1_type 0 189 2 268 314 19 51 chr2 43332505 43332661 -207355193 - MIR3 SINE MIR -54 154 4 433 301 92 0 chr2 43332690 43332853 -207355001 - MIR SINE MIR -56 206 29 403 292 39 0 chr2 43333017 43333147 -207354707 - MIR SINE MIR -82 180 46 451 325 96 24 chr2 43334271 43334606 -207353248 - Charlie2 DNA MER1_type -2456 406 48 2507 121 6 6 chr2 43334725 43335089 -207352765 + THE1B LTR MaLR 1 364 0 240 167 0 0 chr2 43335633 43335675 -207352179 + MER5B DNA MER1_type 8 49 -129 689 130 0 0 chr2 43335690 43335790 -207352064 - HY3 scRNA scRNA -1 100 1 622 220 14 21 chr2 43335790 43335931 -207351923 + MER5B DNA MER1_type 37 176 -2 1144 184 104 27 chr2 43336091 43336334 -207351520 - Zaphod DNA AcHobo -48 3983 3705 2452 153 40 16 chr2 43336334 43336758 -207351096 - Tigger2a DNA MER2_type 0 434 1 1144 184 104 27 chr2 43336758 43336851 -207351003 - Zaphod DNA AcHobo -326 3705 3621 779 212 16 0 chr2 43336887 43337071 -207350783 - Zaphod DNA AcHobo -515 3516 3330 1364 140 71 81 chr2 43337071 43337539 -207350315 - THE1C LTR MaLR 0 428 1 * 7883 227 113 47 chr2 43337539 43338577 -207349277 - Zaphod DNA AcHobo -697 3334 2366 1902 131 11 7 chr2 43338577 43338859 -207348995 + AluSx SINE Alu 1 283 -29 7883 227 113 47 chr2 43338859 43339564 -207348290 - Zaphod DNA AcHobo -1665 2366 1709 2149 108 56 0 chr2 43339564 43339851 -207348003 + AluSx SINE Alu 1 303 -9 7883 227 113 47 chr2 43339851 43340344 -207347510 - Zaphod DNA AcHobo -2322 1709 1250 2164 113 75 20 chr2 43340344 43340689 -207347165 - THE1B LTR MaLR 0 364 1 7883 227 113 47 chr2 43340689 43340868 -207346986 - Zaphod DNA AcHobo -2781 1250 1084 1882 126 4 22 chr2 43340868 43341145 -207346709 - AluSx SINE Alu -21 291 20 7883 227 113 47 chr2 43341145 43341730 -207346124 - Zaphod DNA AcHobo -2947 1084 133 456 270 110 6 chr2 43342176 43342339 -207345515 + MIR SINE MIR 2 181 -81 1963 125 0 17 chr2 43342377 43342664 -207345190 + AluSc SINE Alu 2 283 -26 942 159 25 13 chr2 43342764 43342921 -207344933 - AluJo SINE Alu -153 159 1 2668 90 3 0 chr2 43344725 43345079 -207342775 - THE1A LTR MaLR 0 355 1 2124 131 0 3 chr2 43347512 43347817 -207340037 + AluSx SINE Alu 1 304 -8 351 203 0 0 chr2 43349592 43349661 -207338193 + U4 snRNA snRNA 1 69 -76 1571 182 31 21 chr2 43350227 43350518 -207337336 - AluJo SINE Alu -18 294 1 1707 152 25 39 chr2 43350643 43350926 -207336928 + AluSx SINE Alu 1 279 -33 310 306 0 0 chr2 43352388 43352473 -207335381 - L2 LINE L2 0 3272 3188 292 284 107 30 chr2 43352540 43352709 -207335145 - MIR SINE MIR -32 230 49 242 336 40 20 chr2 43352818 43352967 -207334887 + MIR SINE MIR 106 257 -5 2297 115 0 0 chr2 43353268 43353572 -207334282 + AluSx SINE Alu 1 304 -8 1781 165 23 26 chr2 43354003 43354312 -207333542 - AluJo SINE Alu -4 308 1 276 256 24 12 chr2 43354335 43354417 -207333437 + MIR SINE MIR 59 141 -121 1588 199 43 3 chr2 43354449 43354776 -207333078 + MER58B DNA MER1_type 2 341 0 388 264 16 24 chr2 43355143 43355268 -207332586 - MIR3 SINE MIR -4 204 81 429 267 53 0 chr2 43357920 43358051 -207329803 - L3b LINE CR1 -315 1268 1131 184 366 43 37 chr2 43358382 43358543 -207329311 + L2 LINE L2 2600 2761 -553 343 129 0 71 chr2 43358732 43358802 -207329052 - LTR67 LTR ERVL -2 555 491 435 196 22 0 chr2 43359055 43359147 -207328707 + MER53 DNA DNA 2 95 -94 338 207 23 11 chr2 43359070 43359157 -207328697 - MER53 DNA DNA -7 182 95 * 190 184 26 0 chr2 43359614 43359652 -207328202 - MIR SINE MIR -117 145 107 1066 188 29 24 chr2 43359719 43359926 -207327928 - MER58A DNA MER1_type -16 208 1 2000 107 3 82 chr2 43361018 43361346 -207326508 - AluSx SINE Alu -8 304 3 710 259 50 10 chr2 43361583 43361784 -207326070 + MIR SINE MIR 53 261 -1 933 241 19 5 chr2 43363037 43363050 -207324804 + MER20 DNA MER1_type 1 219 0 947 231 20 5 chr2 43363050 43363253 -207324601 + MER20 DNA MER1_type 14 219 0 880 181 13 7 chr2 43363582 43363737 -207324117 + AluSx SINE Alu 1 156 -156 232 100 0 0 chr2 43363737 43363777 -207324077 + Alu SINE Alu 262 301 0 805 254 41 29 chr2 43363839 43364083 -207323771 + MIR SINE MIR 16 262 0 2261 113 7 0 chr2 43364143 43364444 -207323410 + AluSx SINE Alu 1 303 -9 201 312 39 0 chr2 43364568 43364645 -207323209 - MIR3 SINE MIR -53 155 76 183 184 0 0 chr2 43364660 43364698 -207323156 + CT-rich Low_complexity Low_complexity 2 39 0 250 303 182 23 chr2 43365163 43365470 -207322384 + L3 LINE CR1 909 1264 -313 2127 134 0 10 chr2 43365631 43365937 -207321917 + AluSx SINE Alu 1 303 -9 1984 158 49 86 chr2 43366124 43366554 -207321300 - MLT2D LTR ERVL 0 414 1 444 284 62 64 chr2 43366807 43367313 -207320541 + L1MEd LINE L1 843 1446 -1044 2265 97 3 16 chr2 43367313 43367621 -207320233 + AluY SINE Alu 1 304 -7 444 284 62 64 chr2 43367621 43367803 -207320051 + L1MEd LINE L1 1446 1627 -863 1757 151 0 57 chr2 43367988 43368305 -207319549 + AluJo SINE Alu 12 310 -2 678 264 107 64 chr2 43368461 43368901 -207318953 + MLT1J LTR MaLR 45 503 -8 2724 237 45 43 chr2 43368910 43369715 -207318139 + MER21B LTR ERV1 1 806 -57 5829 26 2 2 chr2 43419795 43420416 -207267438 + SVA Other Other 766 1386 0 996 167 0 38 chr2 43420447 43420633 -207267221 - AluJb SINE Alu -11 301 123 334 190 121 35 chr2 43420711 43420827 -207267027 + L1ME2 LINE L1 5729 5854 -310 894 87 11 38 chr2 43420834 43421019 -207266835 + (TA)n Simple_repeat Simple_repeat 1 180 0 272 250 0 0 chr2 43421050 43421114 -207266740 - L1PA6 LINE L1 -17 6137 6074 942 57 0 8 chr2 43421450 43421572 -207266282 + L1PA7 LINE L1 6033 6153 -1 222 91 0 0 chr2 43421736 43421769 -207266085 + (T)n Simple_repeat Simple_repeat 1 33 0 438 220 46 9 chr2 43421927 43422036 -207265818 + MIR SINE MIR 66 178 -84 * 671 226 30 24 chr2 43422035 43422203 -207265651 + MIR SINE MIR 75 243 -19 1849 116 24 0 chr2 43422429 43422737 -207265117 + AluSx SINE Alu 26 339 0 5198 51 0 31 chr2 43423030 43423604 -207264250 - L1PA7 LINE L1 -103 6051 5502 2365 103 0 0 chr2 43423604 43423895 -207263959 - AluSc SINE Alu -17 292 2 5198 51 0 31 chr2 43423895 43424028 -207263826 - L1PA7 LINE L1 -652 5502 5366 2045 141 30 43 chr2 43424253 43424408 -207263446 + MLT1A1 LTR MaLR 2 158 -207 2245 112 10 13 chr2 43424408 43424720 -207263134 + AluSx SINE Alu 1 311 -1 2045 141 30 43 chr2 43424720 43424933 -207262921 + MLT1A1 LTR MaLR 158 365 0 5898 90 24 33 chr2 43425099 43426184 -207261670 + SVA Other Other 8 866 -520 1101 278 60 21 chr2 43428095 43428562 -207259292 - LTR33A LTR ERVL -38 485 1 897 233 11 0 chr2 43429657 43429833 -207258021 - MER45A DNA AcHobo 0 178 1 2021 125 7 4 chr2 43429935 43430391 -207257463 + AluJb SINE Alu 1 457 0 727 275 95 44 chr2 43430404 43430855 -207256999 + MLT1F LTR MaLR 68 541 -1 183 281 18 0 chr2 43432812 43432869 -207254985 - MIR SINE MIR -20 242 185 447 274 55 8 chr2 43433532 43433700 -207254154 + L1ME LINE L1 5493 5652 -469 1263 222 83 24 chr2 43433700 43433988 -207253866 + AluJo SINE Alu 3 307 -5 247 200 14 14 chr2 43434023 43434093 -207253761 + GA-rich Low_complexity Low_complexity 3 72 0 2158 135 10 0 chr2 43435123 43435420 -207252434 - AluSx SINE Alu -12 300 1 634 210 123 0 chr2 43435425 43435605 -207252249 - L1MC4a LINE L1 -430 5754 5689 1817 111 6 105 chr2 43436031 43436356 -207251498 - AluJb SINE Alu -19 293 1 3890 144 45 30 chr2 43436607 43437300 -207250554 - MER39 LTR ERV1 -4 703 1 532 256 121 10 chr2 43437374 43437573 -207250281 - MIR SINE MIR -38 224 4 293 268 63 42 chr2 43438001 43438143 -207249711 + Charlie8 DNA MER1_type 46 190 -2227 8774 241 101 36 chr2 43439361 43441853 -207246001 + L2 LINE L2 16 2345 -968 1823 170 0 23 chr2 43441853 43442159 -207245695 + AluJb SINE Alu 1 299 -13 8774 241 101 36 chr2 43442159 43442270 -207245584 + L2 LINE L2 2345 2447 -866 1314 178 152 0 chr2 43442270 43442534 -207245320 + AluJb SINE Alu 1 304 -8 8774 241 101 36 chr2 43442534 43443035 -207244819 + L2 LINE L2 2447 3312 -1 180 77 0 0 chr2 43443208 43443234 -207244620 + (GA)n Simple_repeat Simple_repeat 1 26 0 2195 98 0 0 chr2 43444376 43444652 -207243202 + AluSg SINE Alu 5 280 -30 189 147 0 0 chr2 43444657 43444691 -207243163 + (TG)n Simple_repeat Simple_repeat 1 34 0 335 183 0 17 chr2 43444691 43444751 -207243103 + L1MCa LINE L1 2006 2064 -4362 * 411 256 47 0 chr2 43444708 43444794 -207243060 - L1MC4 LINE L1 -1339 6703 6614 * 426 233 47 0 chr2 43444722 43444808 -207243046 + L1MC4 LINE L1 6614 6703 -1339 431 184 0 10 chr2 43444966 43445064 -207242790 + (CA)n Simple_repeat Simple_repeat 1 97 0 623 234 84 48 chr2 43445697 43445919 -207241935 - L1ME4a LINE L1 -2 6119 5880 2359 107 0 19 chr2 43445919 43446237 -207241617 + AluSx SINE Alu 1 312 0 623 234 84 48 chr2 43446237 43446347 -207241507 - L1ME4a LINE L1 -241 5880 5775 1184 153 186 5 chr2 43446790 43447005 -207240849 - AluJo SINE Alu -58 254 1 584 293 9 47 chr2 43447014 43447229 -207240625 + MIR SINE MIR 5 211 -51 632 253 54 7 chr2 43447243 43447520 -207240334 - L1ME4a LINE L1 -755 5391 5102 658 323 77 53 chr2 43448439 43448894 -207238960 - MLT1K LTR MaLR -121 467 2 423 262 95 0 chr2 43449584 43449742 -207238112 + MIR3 SINE MIR 20 194 -14 1870 143 7 4 chr2 43449852 43450132 -207237722 + AluSx SINE Alu 27 307 -5 213 361 12 0 chr2 43450574 43450657 -207237197 - L2 LINE L2 -2 3270 3187 323 223 30 176 chr2 43451036 43451269 -207236585 + L2 LINE L2 3115 3313 0 478 248 86 0 chr2 43452127 43452244 -207235610 - L2 LINE L2 -1 3312 3186 872 246 120 9 chr2 43452616 43452980 -207234874 - MER57A LTR ERV1 0 403 31 1551 154 14 134 chr2 43452982 43453332 -207234522 + AluYb8 SINE Alu 1 308 0 397 279 152 27 chr2 43453424 43453711 -207234143 + L1ME4a LINE L1 5509 5759 -362 2266 111 0 3 chr2 43453711 43454009 -207233845 + AluSx SINE Alu 1 297 -15 397 279 152 27 chr2 43454009 43454169 -207233685 + L1ME4a LINE L1 5759 6012 -109 753 235 37 23 chr2 43455593 43455810 -207232044 + L1MCc LINE L1 24 243 -6180 1059 146 30 90 chr2 43455914 43456147 -207231707 + MER20 DNA MER1_type 1 219 0 1692 177 32 64 chr2 43456212 43456585 -207231269 + MLT1A1 LTR MaLR 5 365 0 484 315 21 61 chr2 43456642 43457017 -207230837 - L1MEc LINE L1 -5837 559 200 1205 236 25 4 chr2 43457017 43457315 -207230539 + LTR40a LTR ERVL 14 259 -203 936 169 12 12 chr2 43457388 43457560 -207230294 + LTR40b LTR ERVL 291 462 0 644 338 107 25 chr2 43457562 43458000 -207229854 - L2 LINE L2 -31 3282 2809 674 271 6 18 chr2 43458005 43458175 -207229679 + MER5B DNA MER1_type 9 176 -2 540 272 36 93 chr2 43458191 43458262 -207229592 - L2 LINE L2 -508 2806 2732 2223 114 3 7 chr2 43458262 43458560 -207229294 + AluSq SINE Alu 1 297 -16 540 272 36 93 chr2 43458560 43458767 -207229087 - L2 LINE L2 -582 2732 2544 314 200 76 57 chr2 43458861 43458966 -207228888 - MLT1J LTR MaLR -1 510 404 250 158 0 0 chr2 43459008 43459046 -207228808 - MLT1L LTR MaLR -218 397 360 405 281 20 127 chr2 43459606 43459898 -207227956 - L2 LINE L2 -2 3270 3010 2191 105 0 7 chr2 43459899 43460208 -207227646 - AluSx SINE Alu 0 307 1 2047 149 13 7 chr2 43460233 43460542 -207227312 + AluJb SINE Alu 1 311 -1 2086 138 3 0 chr2 43461359 43461657 -207226197 + AluJb SINE Alu 1 299 -13 376 331 77 60 chr2 43462325 43462739 -207225115 + L2 LINE L2 2834 3254 -18 2198 121 0 7 chr2 43462745 43463051 -207224803 + AluSx SINE Alu 1 304 -8 265 188 14 29 chr2 43463297 43463366 -207224488 + CT-rich Low_complexity Low_complexity 4 71 0 201 304 36 0 chr2 43464491 43464547 -207223307 - L2 LINE L2 -2 3311 3254 2082 150 81 8 chr2 43464551 43464944 -207222910 + MSTA LTR MaLR 7 428 0 260 326 53 63 chr2 43464975 43465165 -207222689 - L2 LINE L2 -91 3181 2994 24 0 0 0 chr2 43466099 43466123 -207221731 + GC_rich Low_complexity Low_complexity 1 24 0 321 286 79 29 chr2 43466495 43466635 -207221219 + MIR SINE MIR 77 223 -39 2321 101 0 23 chr2 43467890 43468196 -207219658 - AluSg SINE Alu -10 300 2 620 229 0 0 chr2 43468198 43468320 -207219534 - MIR SINE MIR -69 193 72 258 269 151 84 chr2 43468321 43468440 -207219414 + L2 LINE L2 3137 3263 -9 2227 126 0 0 chr2 43468444 43468746 -207219108 - AluSq SINE Alu -11 302 1 254 277 0 0 chr2 43468919 43468984 -207218870 + MIR SINE MIR 102 166 -96 196 343 30 0 chr2 43469053 43469120 -207218734 + MIR SINE MIR 163 231 -31 1675 233 106 33 chr2 43469280 43469825 -207218029 - MLT1G1 LTR MaLR 0 595 11 340 318 0 40 chr2 43469825 43469951 -207217903 - MIR SINE MIR -72 136 16 499 306 29 87 chr2 43470894 43470995 -207216859 + MIR SINE MIR 29 134 -128 2575 51 0 0 chr2 43470995 43471288 -207216566 + AluY SINE Alu 2 294 -17 499 306 29 87 chr2 43471288 43471428 -207216426 + MIR SINE MIR 134 256 -6 722 25 0 0 chr2 43471853 43471934 -207215920 + AluY SINE Alu 79 159 -152 332 290 90 0 chr2 43473609 43473709 -207214145 + L1MC4 LINE L1 6613 6721 -1321 700 297 97 40 chr2 43473730 43474175 -207213679 - L1MC4a LINE L1 -1904 5904 5435 987 149 0 14 chr2 43474176 43474324 -207213530 + AluSq/x SINE Alu 2 147 -165 1443 173 0 0 chr2 43474324 43474544 -207213310 + AluSg/x SINE Alu 85 304 -8 200 245 19 19 chr2 43474637 43474690 -207213164 - MER5B DNA MER1_type -42 136 84 2132 228 50 87 chr2 43474714 43475102 -207212752 + L1ME3 LINE L1 5057 5458 -704 999 214 48 29 chr2 43475102 43475308 -207212546 + MER63A DNA MER1_type 1 210 0 2132 228 50 87 chr2 43475308 43475520 -207212334 + L1ME3 LINE L1 5458 5676 -486 1893 215 92 29 chr2 43475520 43475940 -207211914 + MLT2B1 LTR ERVL 1 393 -127 348 83 0 0 chr2 43475940 43475988 -207211866 + (TA)n Simple_repeat Simple_repeat 2 49 0 1893 215 92 29 chr2 43475988 43476015 -207211839 + MLT2B1 LTR ERVL 393 417 -103 557 52 13 0 chr2 43476015 43476092 -207211762 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 1893 215 92 29 chr2 43476092 43476131 -207211723 + MLT2B1 LTR ERVL 417 519 -1 2132 228 50 87 chr2 43476131 43476637 -207211217 + L1ME3 LINE L1 5676 6135 -27 1646 147 0 106 chr2 43476670 43477010 -207210844 - AluJo SINE Alu -8 304 1 21 57 0 0 chr2 43477014 43477049 -207210805 + AT_rich Low_complexity Low_complexity 1 35 0 403 365 17 59 chr2 43477237 43477527 -207210327 - L2 LINE L2 0 3272 2995 2282 143 13 19 chr2 43477559 43477936 -207209918 - THE1C LTR MaLR 0 375 1 401 286 50 8 chr2 43478308 43478427 -207209427 + L2 LINE L2 3190 3313 0 2411 78 14 0 chr2 43478588 43478881 -207208973 - AluSc SINE Alu -11 298 2 355 239 70 148 chr2 43479151 43479435 -207208419 + MIR SINE MIR 1 262 0 2575 170 79 38 chr2 43479919 43480266 -207207588 - MER69 DNA AcHobo -4 2522 2191 2302 118 0 0 chr2 43480266 43480565 -207207289 + AluSq SINE Alu 1 302 -11 633 27 0 0 chr2 43480565 43480640 -207207214 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2575 170 79 38 chr2 43480646 43480980 -207206874 - MER69 DNA AcHobo -335 2191 1813 696 241 147 8 chr2 43480981 43481247 -207206607 - MER69 DNA AcHobo -389 837 535 1219 262 67 24 chr2 43481267 43481687 -207206167 + MLT1C LTR MaLR 22 459 -8 1450 241 61 48 chr2 43481700 43482086 -207205768 - MER69 DNA AcHobo -688 538 159 2053 115 32 0 chr2 43482086 43482364 -207205490 + AluSx SINE Alu 1 287 -25 666 62 0 0 chr2 43482364 43482460 -207205394 + (TA)n Simple_repeat Simple_repeat 2 97 0 1450 241 61 48 chr2 43482460 43482594 -207205260 - MER69 DNA AcHobo -1066 160 10 228 349 153 21 chr2 43483032 43483221 -207204633 + L3 LINE CR1 55 268 -1309 327 49 0 0 chr2 43483221 43483262 -207204592 + (TG)n Simple_repeat Simple_repeat 2 42 0 570 253 27 40 chr2 43483376 43483545 -207204309 - MIR3 SINE MIR -54 154 7 279 365 81 19 chr2 43483862 43484073 -207203781 + L3 LINE CR1 248 471 -1106 298 250 50 60 chr2 43484129 43484150 -207203704 + L3 LINE CR1 618 638 -939 2566 57 0 3 chr2 43484150 43484451 -207203403 - AluY SINE Alu -11 300 1 298 250 50 60 chr2 43484451 43484529 -207203325 + L3 LINE CR1 638 716 -861 238 307 105 55 chr2 43484672 43485049 -207202805 - L2 LINE L2 -154 3118 2728 535 327 110 32 chr2 43485151 43485497 -207202357 + L2 LINE L2 2836 3208 -64 239 95 48 0 chr2 43485527 43485569 -207202285 + GA-rich Low_complexity Low_complexity 4 47 0 1668 268 66 15 chr2 43485576 43486103 -207201751 - MLT1H1 LTR MaLR -1 554 1 1038 253 4 16 chr2 43486323 43486568 -207201286 + MIR SINE MIR 19 260 -2 305 274 53 0 chr2 43486932 43487027 -207200827 - L2 LINE L2 -1 3271 3172 2571 108 16 3 chr2 43487822 43488192 -207199662 - THE1C LTR MaLR 0 375 1 216 269 58 0 chr2 43488253 43488357 -207199497 + (CCCTAA)n Simple_repeat Simple_repeat 2 111 0 318 274 98 0 chr2 43489716 43489818 -207198036 - L2 LINE L2 -5 3267 3156 400 201 16 63 chr2 43489892 43490081 -207197773 + (CA)n Simple_repeat Simple_repeat 1 180 0 370 193 12 36 chr2 43490262 43490345 -207197509 + L2 LINE L2 3192 3272 0 266 237 41 31 chr2 43490563 43490660 -207197194 + LTR16B LTR ERVL 319 416 -48 456 255 0 22 chr2 43491223 43491407 -207196447 + G-rich Low_complexity Low_complexity 1 180 0 184 300 0 0 chr2 43493259 43493299 -207194555 + MIR SINE MIR 40 79 -129 939 265 26 0 chr2 43493312 43493542 -207194312 + MIR SINE MIR 21 256 -6 195 345 84 8 chr2 43493675 43493794 -207194060 + L2 LINE L2 2724 2851 -463 6330 33 83 13 chr2 43494149 43495339 -207192515 + SVA Other Other 1 1383 -3 191 271 42 0 chr2 43495402 43495450 -207192404 + L2 LINE L2 3261 3310 -3 262 289 36 0 chr2 43496936 43497019 -207190835 + L2 LINE L2 3187 3272 0 27 29 0 0 chr2 43498643 43498677 -207189177 + AT_rich Low_complexity Low_complexity 1 34 0 466 254 223 10 chr2 43499528 43499721 -207188133 - MIR SINE MIR -11 251 18 202 320 13 0 chr2 43500017 43500095 -207187759 + (CA)n Simple_repeat Simple_repeat 1 79 0 996 234 115 50 chr2 43501707 43501952 -207185902 + MLT1F1 LTR MaLR 123 408 -159 2364 71 0 7 chr2 43501952 43502247 -207185607 + AluSc SINE Alu 1 293 -16 996 234 115 50 chr2 43502247 43502419 -207185435 + MLT1F1 LTR MaLR 408 567 0 947 221 152 64 chr2 43502574 43502949 -207184905 + L2 LINE L2 2875 3282 -31 1697 146 78 21 chr2 43502955 43503228 -207184626 - MLT1A1 LTR MaLR -2 363 66 3485 115 8 2 chr2 43503228 43503722 -207184132 - LOR1a LTR ERV1 0 497 1 1697 146 78 21 chr2 43503722 43503783 -207184071 - MLT1A1 LTR MaLR -299 66 10 441 0 0 0 chr2 43503895 43503944 -207183910 + (TG)n Simple_repeat Simple_repeat 2 50 0 1949 82 0 4 chr2 43503944 43504189 -207183665 - AluSq SINE Alu -28 285 42 309 298 121 8 chr2 43504251 43504375 -207183479 - MIR SINE MIR -75 187 50 448 316 0 32 chr2 43504432 43504587 -207183267 - MIR SINE MIR -50 212 63 218 224 0 35 chr2 43504591 43504649 -207183205 - L2 LINE L2 -1 3271 3216 352 283 62 118 chr2 43504923 43505230 -207182624 - L1MB5 LINE L1 -136 6030 5743 571 298 10 5 chr2 43505350 43505564 -207182290 - L1MB5 LINE L1 -619 5547 5331 959 227 73 45 chr2 43505820 43506335 -207181519 + L1MC4 LINE L1 5125 5375 -789 260 174 0 0 chr2 43506335 43506381 -207181473 + Alu SINE Alu 243 288 -12 959 227 73 45 chr2 43506381 43506514 -207181340 + L1MC4 LINE L1 5375 5503 -661 375 277 71 0 chr2 43506522 43506634 -207181220 + L1ME3 LINE L1 5920 6039 -123 * 515 189 9 0 chr2 43506622 43506733 -207181121 + L1ME3A LINE L1 6059 6170 0 2334 98 0 19 chr2 43506994 43507310 -207180544 + AluSx SINE Alu 1 310 -2 340 306 60 15 chr2 43507333 43507467 -207180387 - MIR3 SINE MIR -68 140 1 1946 126 68 0 chr2 43508792 43509070 -207178784 - AluSg SINE Alu -13 297 1 537 254 16 8 chr2 43509106 43509232 -207178622 + AluJb SINE Alu 183 309 -3 793 251 81 9 chr2 43509317 43509528 -207178326 - MIR SINE MIR -17 245 20 2364 98 0 0 chr2 43510331 43510636 -207177218 - AluSq SINE Alu -8 305 1 321 264 251 18 chr2 43511115 43511282 -207176572 + MIR SINE MIR 2 207 -55 272 302 47 0 chr2 43511375 43511461 -207176393 - MIR SINE MIR -74 134 45 889 234 63 3 chr2 43511866 43512152 -207175702 - L1ME3A LINE L1 -9 6161 5859 441 111 0 0 chr2 43512182 43512245 -207175609 + L1PA8 LINE L1 6097 6159 -13 209 264 35 128 chr2 43512482 43512709 -207175145 - L2 LINE L2 -410 2904 2699 317 239 37 18 chr2 43512866 43512975 -207174879 + L1MD3 LINE L1 7877 7987 -8 234 0 0 0 chr2 43513605 43513631 -207174223 + (A)n Simple_repeat Simple_repeat 1 26 0 327 104 0 0 chr2 43513633 43513681 -207174173 + (TA)n Simple_repeat Simple_repeat 1 48 0 895 234 7 78 chr2 43513939 43513961 -207173893 + MIR SINE MIR 13 35 -227 1974 144 0 26 chr2 43513961 43514266 -207173588 + AluSx SINE Alu 1 297 -15 895 234 7 78 chr2 43514266 43514512 -207173342 + MIR SINE MIR 35 262 0 747 304 57 26 chr2 43515247 43515596 -207172258 + L2 LINE L2 2280 2639 -675 389 339 86 11 chr2 43515671 43515845 -207172009 - MER5A DNA MER1_type -2 187 1 915 227 34 96 chr2 43515927 43516167 -207171687 - L2 LINE L2 -8 3305 3096 2583 100 3 22 chr2 43516167 43516536 -207171318 + THE1B LTR MaLR 1 362 -2 915 227 34 96 chr2 43516536 43516682 -207171172 - L2 LINE L2 -217 3096 2943 279 185 33 0 chr2 43517081 43517173 -207170681 + GA-rich Low_complexity Low_complexity 4 98 0 2299 109 0 10 chr2 43517283 43517587 -207170267 + AluSg SINE Alu 1 301 -9 467 329 18 0 chr2 43519346 43519513 -207168341 - MIR SINE MIR -3 259 90 372 261 21 56 chr2 43522028 43522170 -207165684 - L3b LINE CR1 -169 1414 1278 186 43 0 0 chr2 43522460 43522483 -207165371 + (GA)n Simple_repeat Simple_repeat 2 24 0 349 217 0 0 chr2 43522485 43522545 -207165309 - AluJo SINE Alu -20 282 223 1093 193 17 0 chr2 43522545 43522726 -207165128 - AluJo SINE Alu -128 184 1 417 301 52 30 chr2 43522726 43522915 -207164939 - MIR SINE MIR -56 206 14 224 235 12 37 chr2 43523708 43523789 -207164065 + GA-rich Low_complexity Low_complexity 3 81 0 749 268 38 17 chr2 43524409 43524648 -207163206 - MIR SINE MIR 0 262 19 631 162 61 95 chr2 43525946 43526030 -207161824 + AluSg/x SINE Alu 137 215 -97 222 37 0 0 chr2 43526030 43526057 -207161797 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 631 162 61 95 chr2 43526057 43526120 -207161734 + AluSg/x SINE Alu 215 279 -33 357 24 0 0 chr2 43526120 43526162 -207161692 + (CA)n Simple_repeat Simple_repeat 1 42 0 560 346 106 49 chr2 43526164 43526485 -207161369 - L2 LINE L2 -132 3140 2839 4202 127 1 28 chr2 43526485 43526556 -207161298 - MER41B LTR ERV1 0 635 564 2671 26 0 3 chr2 43526556 43526859 -207160995 + AluYa5 SINE Alu 1 302 -9 4202 127 1 28 chr2 43526859 43526917 -207160937 - MER41B LTR ERV1 -71 564 506 2166 130 0 3 chr2 43526917 43527217 -207160637 + AluSx SINE Alu 1 299 -13 4202 127 1 28 chr2 43527217 43527738 -207160116 - MER41B LTR ERV1 -129 506 1 560 346 106 49 chr2 43527738 43528095 -207159759 - L2 LINE L2 -433 2839 2422 513 248 67 8 chr2 43528310 43528492 -207159362 - MIR SINE MIR -37 225 30 2385 76 0 23 chr2 43529856 43530160 -207157694 + AluY SINE Alu 1 297 -14 252 310 110 10 chr2 43530259 43530359 -207157495 + L3 LINE CR1 990 1099 -478 * 865 248 64 72 chr2 43530341 43530732 -207157122 - L2 LINE L2 -1 3312 2925 181 383 39 23 chr2 43530704 43530832 -207157022 + L3 LINE CR1 1067 1196 -381 * 1876 160 13 3 chr2 43530991 43531298 -207156556 - AluJo SINE Alu -2 310 1 355 217 94 51 chr2 43531585 43531723 -207156131 - L2 LINE L2 -12 3301 3158 726 239 0 38 chr2 43531889 43532048 -207155806 + FRAM SINE Alu 1 153 -13 1419 188 78 44 chr2 43532167 43532460 -207155394 - AluJo SINE Alu -9 303 1 2450 107 0 0 chr2 43532866 43533176 -207154678 + AluSx SINE Alu 1 310 -2 531 300 45 20 chr2 43534284 43534484 -207153370 + MIR SINE MIR 20 224 -38 229 250 56 14 chr2 43534733 43534805 -207153049 + MIR SINE MIR 114 188 -74 2290 106 23 0 chr2 43536619 43536922 -207150932 + AluSx SINE Alu 1 310 -2 1749 169 10 20 chr2 43536937 43537238 -207150616 + AluJb SINE Alu 12 309 -3 617 178 0 25 chr2 43537247 43537404 -207150450 + GA-rich Low_complexity Low_complexity 3 155 0 2215 142 0 0 chr2 43540631 43540942 -207146912 + AluSx SINE Alu 1 311 -1 939 209 0 0 chr2 43540950 43541113 -207146741 + AluJb SINE Alu 137 299 -13 203 268 211 14 chr2 43541299 43541441 -207146413 - L2 LINE L2 -272 3000 2831 231 185 37 102 chr2 43541611 43541719 -207146135 + MER103 DNA DNA 65 165 -1 201 294 29 0 chr2 43542212 43542280 -207145574 + T-rich Low_complexity Low_complexity 5 74 0 1750 158 36 26 chr2 43542282 43542585 -207145269 - AluJo SINE Alu -2 310 5 617 220 254 6 chr2 43543020 43543197 -207144657 + MIR SINE MIR 2 222 -40 223 301 257 29 chr2 43544912 43545048 -207142806 + MER5A DNA MER1_type 16 182 -7 293 157 59 0 chr2 43545680 43545731 -207142123 + MER5B DNA MER1_type 1 54 -124 492 193 18 0 chr2 43545732 43545846 -207142008 - L1MA10 LINE L1 -7 6327 6212 1131 62 0 0 chr2 43545873 43546002 -207141852 - AluSq/x SINE Alu -182 130 2 4416 203 73 64 chr2 43546003 43547195 -207140659 - L1M4 LINE L1 -1009 5137 3958 1926 146 0 0 chr2 43547195 43547462 -207140392 + AluSx SINE Alu 1 267 -45 1017 113 0 0 chr2 43547465 43547624 -207140230 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 4416 203 73 64 chr2 43547624 43547898 -207139956 - L1M4 LINE L1 -2189 3957 3653 2337 108 3 10 chr2 43547950 43548264 -207139590 - AluSq SINE Alu 0 313 2 2261 84 28 3 chr2 43548273 43548559 -207139295 - AluSx SINE Alu -19 293 1 2544 87 3 0 chr2 43548624 43548936 -207138918 - AluSp SINE Alu 0 313 1 23 0 0 0 chr2 43549690 43549713 -207138141 + AT_rich Low_complexity Low_complexity 1 23 0 429 284 83 65 chr2 43550094 43550401 -207137453 - L1ME4a LINE L1 -70 6051 5732 2223 104 3 0 chr2 43550401 43550688 -207137166 - AluSc SINE Alu -6 303 16 429 284 83 65 chr2 43550688 43550827 -207137027 - L1ME4a LINE L1 -389 5732 5597 2177 127 0 0 chr2 43550904 43551228 -207136626 + AluSx SINE Alu 1 312 0 452 193 25 134 chr2 43552358 43552596 -207135258 - L1MC5 LINE L1 -48 7913 7702 2325 104 3 3 chr2 43552596 43552903 -207134951 - AluSq SINE Alu -6 307 1 671 265 217 36 chr2 43554030 43554339 -207133515 + L2 LINE L2 2947 3311 -2 2080 156 169 14 chr2 43555413 43555850 -207132004 + MLT1D LTR MaLR 1 505 0 347 238 12 12 chr2 43555871 43555951 -207131903 - L2 LINE L2 -47 3266 3187 219 88 0 0 chr2 43556237 43556271 -207131583 + (TC)n Simple_repeat Simple_repeat 1 34 0 2383 59 38 0 chr2 43556495 43556784 -207131070 - AluSp SINE Alu -11 302 3 647 260 77 16 chr2 43557276 43557522 -207130332 - MIR SINE MIR 0 262 2 2229 109 30 0 chr2 43562360 43562662 -207125192 + AluSx SINE Alu 1 311 -1 658 272 49 36 chr2 43562666 43562890 -207124964 + MIR SINE MIR 19 245 -17 565 294 56 15 chr2 43565526 43565723 -207122131 + MIR SINE MIR 48 252 -10 486 268 14 29 chr2 43566440 43566508 -207121346 + MER5A DNA MER1_type 48 115 -74 1057 177 12 0 chr2 43566508 43566672 -207121182 + FRAM SINE Alu 1 166 0 486 268 14 29 chr2 43566672 43566741 -207121113 + MER5A DNA MER1_type 115 183 -6 28 61 0 0 chr2 43568343 43568392 -207119462 + AT_rich Low_complexity Low_complexity 1 49 0 211 311 14 0 chr2 43570045 43570119 -207117735 + L3b LINE CR1 1340 1414 -169 403 312 101 25 chr2 43570633 43570870 -207116984 + MIR SINE MIR 2 256 -6 205 299 78 13 chr2 43571343 43571420 -207116434 - MIR SINE MIR -24 238 157 310 264 9 28 chr2 43572225 43572331 -207115523 - LTR33 LTR ERVL -322 199 96 997 217 8 41 chr2 43572516 43572760 -207115094 + MER106A DNA MER1_type 1 236 0 2285 96 7 0 chr2 43572948 43573250 -207114604 + AluSq SINE Alu 1 304 -9 315 336 101 13 chr2 43574892 43575041 -207112813 + L1MC/D LINE L1 5616 5777 -2031 2083 107 50 10 chr2 43575102 43575401 -207112453 + AluSx SINE Alu 1 311 -1 7574 34 2 2 chr2 43575517 43576789 -207111065 - L1PA5 LINE L1 -9 6145 4873 2393 99 3 13 chr2 43576836 43577148 -207110706 - AluSq SINE Alu -4 309 1 331 253 7 84 chr2 43577447 43577601 -207110253 - Charlie8 DNA MER1_type -2275 142 1 2249 160 8 0 chr2 43579996 43580359 -207107495 + MER47A DNA MER2_type 1 366 0 2138 108 39 0 chr2 43580516 43580802 -207107052 + AluSx SINE Alu 1 297 -15 2320 89 0 0 chr2 43580804 43581144 -207106710 + AluY SINE Alu 1 340 0 2319 76 28 3 chr2 43581157 43581447 -207106407 + AluY SINE Alu 1 297 -14 586 305 68 4 chr2 43581909 43582145 -207105709 + MIR SINE MIR 12 262 0 994 198 6 0 chr2 43582596 43582758 -207105096 - FRAM SINE Alu -1 165 3 283 336 45 37 chr2 43583789 43583923 -207103931 - L2 LINE L2 0 3313 3179 820 221 0 6 chr2 43583974 43584132 -207103722 - FRAM SINE Alu -19 157 1 2504 199 27 40 chr2 43584169 43584718 -207103136 + MLT1F LTR MaLR 1 542 0 463 246 168 17 chr2 43584718 43584897 -207102957 - MIR SINE MIR -52 210 5 318 338 28 0 chr2 43584994 43585139 -207102715 - L2 LINE L2 -213 3059 2911 189 107 0 0 chr2 43585360 43585388 -207102466 + (T)n Simple_repeat Simple_repeat 1 28 0 2576 81 0 0 chr2 43585390 43585699 -207102155 - AluSc SINE Alu 0 309 1 1060 303 53 58 chr2 43585835 43585949 -207101905 + L3 LINE CR1 346 459 -1118 455 122 27 0 chr2 43585949 43586023 -207101831 + MADE1 DNA Mariner 1 76 -4 1060 303 53 58 chr2 43586023 43586489 -207101365 + L3 LINE CR1 459 923 -654 455 276 21 60 chr2 43588428 43588599 -207099255 - MIR3 SINE MIR -59 149 9 254 231 12 53 chr2 43589111 43589280 -207098574 + (TTATA)n Simple_repeat Simple_repeat 2 163 0 335 192 49 127 chr2 43590215 43590314 -207097540 + MIR SINE MIR 92 197 -65 2268 100 7 0 chr2 43590314 43590605 -207097249 - AluSx SINE Alu -14 298 6 335 192 49 127 chr2 43590605 43590632 -207097222 + MIR SINE MIR 197 225 -37 1965 124 4 4 chr2 43590632 43590906 -207096948 - AluSx SINE Alu -38 274 1 335 192 49 127 chr2 43590906 43590974 -207096880 + MIR SINE MIR 225 262 0 308 220 33 11 chr2 43591768 43591859 -207095995 + (TTCA)n Simple_repeat Simple_repeat 1 93 0 34 0 0 0 chr2 43592195 43592229 -207095625 + AT_rich Low_complexity Low_complexity 1 34 0 1047 227 144 49 chr2 43592371 43592779 -207095075 + L2 LINE L2 2622 3110 -203 306 106 0 0 chr2 43592779 43592826 -207095028 + (CA)n Simple_repeat Simple_repeat 1 47 0 1047 227 144 49 chr2 43592826 43593052 -207094802 + L2 LINE L2 3110 3313 0 204 197 0 66 chr2 43594434 43594495 -207093359 + CT-rich Low_complexity Low_complexity 5 61 0 481 328 91 0 chr2 43594506 43594692 -207093162 + MIR SINE MIR 20 222 -40 215 231 0 0 chr2 43594758 43594797 -207093057 + (CA)n Simple_repeat Simple_repeat 2 40 0 1758 195 44 16 chr2 43595716 43596080 -207091774 + MLT1A2 LTR MaLR 1 374 0 1016 231 41 16 chr2 43596382 43596624 -207091230 - MIR SINE MIR -3 259 12 511 187 57 32 chr2 43597776 43597899 -207089955 - MIR SINE MIR -58 204 79 664 261 90 18 chr2 43597905 43598274 -207089580 + MLT1J2 LTR MaLR 5 425 -25 646 222 254 1 chr2 43598823 43599095 -207088759 + L1MC4a LINE L1 5585 5758 -406 22 0 0 0 chr2 43599294 43599316 -207088538 + AT_rich Low_complexity Low_complexity 1 22 0 544 191 21 28 chr2 43600675 43600816 -207087038 - MER103 DNA DNA -7 159 20 459 0 0 0 chr2 43600900 43600951 -207086903 + (TG)n Simple_repeat Simple_repeat 2 52 0 944 142 62 31 chr2 43601338 43601500 -207086354 + MER5A DNA MER1_type 1 167 -22 805 261 139 13 chr2 43601665 43601975 -207085879 + L2 LINE L2 2963 3311 -2 200 156 22 22 chr2 43604760 43604805 -207083049 + GA-rich Low_complexity Low_complexity 1 45 0 469 162 0 0 chr2 43657445 43657519 -207030335 - AluS SINE Alu -239 74 1 524 133 0 0 chr2 43657541 43657616 -207030238 + AluJo SINE Alu 1 75 -237 843 119 0 24 chr2 43657724 43657850 -207030004 - FLAM_C SINE Alu -10 133 11 1091 218 0 5 chr2 43658064 43658280 -207029574 + AluJo SINE Alu 75 289 -23 324 251 134 53 chr2 43658314 43658485 -207029369 - MIR SINE MIR -75 187 3 21 0 0 0 chr2 43658554 43658575 -207029279 + AT_rich Low_complexity Low_complexity 1 21 0 571 306 90 5 chr2 43658994 43659216 -207028638 - L2 LINE L2 -681 2633 2393 1175 205 31 4 chr2 43659435 43659693 -207028161 - MER58 DNA MER1_type -2155 265 1 251 279 115 33 chr2 43659960 43660082 -207027772 - MLT1K LTR MaLR -146 442 311 25 31 0 0 chr2 43660338 43660370 -207027484 + AT_rich Low_complexity Low_complexity 1 32 0 577 56 0 0 chr2 43660472 43660543 -207027311 + AluS SINE Alu 2 72 -241 633 108 43 0 chr2 43660555 43660648 -207027206 + AluS SINE Alu 1 97 -216 227 118 0 0 chr2 43660748 43660782 -207027072 + Alu SINE Alu 257 290 -11 1334 126 9 14 chr2 43660816 43661030 -207026824 + AluJb SINE Alu 3 215 -97 24 32 0 0 chr2 43661057 43661088 -207026766 + AT_rich Low_complexity Low_complexity 1 31 0 1642 217 58 51 chr2 43661095 43661643 -207026211 + L1MB5 LINE L1 4740 5291 -855 256 228 0 0 chr2 43661677 43661734 -207026120 + L1MB5 LINE L1 5938 5994 -180 * 1561 173 40 106 chr2 43661732 43661990 -207025864 + L1ME1 LINE L1 5677 5886 -280 1746 172 3 18 chr2 43661990 43662275 -207025579 + AluJo SINE Alu 2 282 -30 1561 173 40 106 chr2 43662275 43662535 -207025319 + L1ME1 LINE L1 5886 6161 -5 339 333 104 28 chr2 43663460 43663709 -207024145 + L2 LINE L2 2579 2846 -468 1214 223 89 6 chr2 43663855 43664169 -207023685 - MER58B DNA MER1_type 0 341 2 868 241 102 55 chr2 43665010 43665430 -207022424 + L1MC4 LINE L1 7473 7912 -130 2182 112 7 0 chr2 43665434 43665730 -207022124 - AluSx SINE Alu -14 298 1 351 223 16 50 chr2 43665812 43665933 -207021921 + L1MC4 LINE L1 7926 8042 0 422 234 206 0 chr2 43666136 43666277 -207021577 + Charlie8 DNA MER1_type 22 191 -2226 1961 206 80 55 chr2 43666442 43667079 -207020775 - L1MC4 LINE L1 -152 7890 7238 1580 240 67 26 chr2 43667075 43667117 -207020737 - L1MC4a LINE L1 -809 6999 6960 * 2097 123 13 7 chr2 43667117 43667426 -207020428 - AluJb SINE Alu -1 311 1 1580 240 67 26 chr2 43667426 43667920 -207019934 - L1MC4a LINE L1 -848 6960 6441 1386 12 0 0 chr2 43667989 43668149 -207019705 - L1PA2 LINE L1 -1 6154 5995 1172 188 15 55 chr2 43668529 43668800 -207019054 - MLT1B LTR MaLR -2 388 129 931 179 6 6 chr2 43668811 43668973 -207018881 + AluSg/x SINE Alu 107 268 -42 581 212 30 38 chr2 43669015 43669147 -207018707 - L2 LINE L2 -8 3305 3175 26 50 0 0 chr2 43669558 43669598 -207018256 + AT_rich Low_complexity Low_complexity 1 40 0 989 30 8 15 chr2 43670062 43670193 -207017661 - L1PA4 LINE L1 0 6155 6026 21 0 0 0 chr2 43670583 43670604 -207017250 + AT_rich Low_complexity Low_complexity 1 21 0 579 277 66 51 chr2 43670996 43671252 -207016602 - MIR SINE MIR 0 262 3 2122 133 3 0 chr2 43672220 43672528 -207015326 - AluSx SINE Alu -3 309 1 371 319 112 6 chr2 43672904 43673073 -207014781 + L2 LINE L2 1814 2000 -1314 180 299 261 14 chr2 43673123 43673330 -207014524 + L2 LINE L2 2141 2398 -916 2307 96 0 0 chr2 43673490 43673783 -207014071 + AluY SINE Alu 1 293 -18 2200 84 10 7 chr2 43674534 43674843 -207013011 - AluY SINE Alu -1 310 1 2318 85 7 7 chr2 43675123 43675428 -207012426 - AluY SINE Alu -6 305 1 1947 128 0 35 chr2 43676885 43677025 -207010829 + AluSx SINE Alu 1 144 -168 2216 111 3 0 chr2 43677025 43677322 -207010532 + AluSq SINE Alu 1 298 -15 1947 128 0 35 chr2 43677322 43677493 -207010361 + AluSx SINE Alu 144 301 -11 612 255 129 21 chr2 43678172 43678458 -207009396 - L1ME3A LINE L1 -219 5951 5635 885 168 23 12 chr2 43678491 43678664 -207009190 + MER58A DNA MER1_type 49 223 -1 688 289 20 36 chr2 43678684 43678985 -207008869 - L1ME3A LINE L1 -526 5636 5341 1356 160 18 5 chr2 43679025 43679244 -207008610 - AluJb SINE Alu -88 224 3 1810 140 56 59 chr2 43679531 43679889 -207007965 - Tigger2 DNA MER2_type -2 2716 2360 2386 135 13 5 chr2 43679890 43680274 -207007580 + Tigger4(Zombi) DNA MER2_type 2345 2731 0 766 167 30 0 chr2 43680472 43680604 -207007250 + AluJo SINE Alu 1 136 -176 735 208 84 7 chr2 43680626 43680780 -207007074 - FRAM SINE Alu 0 166 1 1370 168 63 8 chr2 43680800 43681068 -207006786 - AluJo SINE Alu -17 295 13 374 265 44 52 chr2 43682003 43682139 -207005715 + MIR3 SINE MIR 64 198 -10 261 226 21 113 chr2 43682263 43682449 -207005405 - L1ME4a LINE L1 -17 6104 5936 294 288 72 13 chr2 43682506 43682719 -207005135 - L1ME4a LINE L1 -299 5822 5694 1744 104 39 72 chr2 43682870 43683177 -207004677 + AluSx SINE Alu 1 297 -15 293 236 22 45 chr2 43683382 43683471 -207004383 + MER94 DNA DNA 5 91 -43 621 318 23 0 chr2 43683507 43683680 -207004174 + L2 LINE L2 2577 2753 -561 249 303 107 13 chr2 43683728 43683864 -207003990 + MIR SINE MIR 2 142 -66 261 163 0 0 chr2 43684650 43684699 -207003155 + CT-rich Low_complexity Low_complexity 1 49 0 * 318 148 0 0 chr2 43684691 43684745 -207003109 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 1510 203 0 40 chr2 43684764 43685089 -207002765 - AluJo SINE Alu 0 312 1 239 296 198 12 chr2 43685546 43685627 -207002227 - MIR SINE MIR -68 140 45 2385 81 3 3 chr2 43686100 43686408 -207001446 - AluSc SINE Alu -1 308 1 1026 104 110 0 chr2 43686975 43687139 -207000715 + AluSp SINE Alu 116 297 -16 1859 150 0 40 chr2 43687216 43687542 -207000312 - AluSq SINE Alu 0 313 1 1482 112 121 0 chr2 43688082 43688331 -206999523 + MER7A DNA MER2_type 40 316 -30 1674 198 3 7 chr2 43688679 43688987 -206998867 - AluJb SINE Alu -5 307 1 381 263 8 8 chr2 43689393 43689511 -206998343 - L1M4 LINE L1 -876 5270 5153 1725 144 34 17 chr2 43689514 43689805 -206998049 - AluJb SINE Alu -8 304 9 271 259 0 12 chr2 43689856 43689937 -206997917 - L1M4 LINE L1 -1125 5021 4942 21 0 0 0 chr2 43690016 43690037 -206997817 + AT_rich Low_complexity Low_complexity 1 21 0 219 339 92 28 chr2 43691056 43691165 -206996689 + MIR SINE MIR 8 123 -139 221 239 0 0 chr2 43691178 43691245 -206996609 + (TTAA)n Simple_repeat Simple_repeat 3 69 0 1665 157 28 7 chr2 43692076 43692362 -206995492 - AluJb SINE Alu -16 296 5 627 259 54 6 chr2 43692911 43693077 -206994777 + MIR SINE MIR 3 176 -86 212 337 66 18 chr2 43693223 43693389 -206994465 - L2 LINE L2 -1605 1709 1536 830 144 0 29 chr2 43693425 43693564 -206994290 + FLAM_C SINE Alu 1 135 -8 2230 72 0 53 chr2 43695030 43695334 -206992520 + AluY SINE Alu 1 288 -23 738 213 50 26 chr2 43696213 43696405 -206991449 - MIR SINE MIR -1 261 67 2330 177 52 41 chr2 43696447 43696802 -206991052 + L1MA7 LINE L1 5589 5953 -338 2317 97 0 3 chr2 43696802 43697102 -206990752 + AluSx SINE Alu 1 299 -13 2330 177 52 41 chr2 43697102 43697261 -206990593 + L1MA7 LINE L1 5953 6109 -182 568 183 0 0 chr2 43697261 43697354 -206990500 + AluJ/FLAM SINE Alu 1 93 -219 1304 179 0 30 chr2 43697379 43697418 -206990436 + AluJo SINE Alu 55 94 -218 3005 91 84 0 chr2 43697418 43697836 -206990018 - MLT2A2 LTR ERVL 0 453 1 1304 179 0 30 chr2 43697836 43698031 -206989823 + AluJo SINE Alu 94 282 -30 867 193 16 16 chr2 43698050 43698237 -206989617 + L1MA7 LINE L1 6099 6285 -6 273 298 128 73 chr2 43698843 43698941 -206988913 - MIR SINE MIR 0 262 171 1708 174 7 4 chr2 43698941 43699222 -206988632 - AluJo SINE Alu -30 282 1 273 298 128 73 chr2 43699222 43699341 -206988513 - MIR SINE MIR -91 171 33 1365 223 33 21 chr2 43699379 43699711 -206988143 - MER58B DNA MER1_type 0 341 6 207 219 0 0 chr2 43700515 43700556 -206987298 + MIR SINE MIR 220 260 -2 902 207 28 94 chr2 43701074 43701227 -206986627 - L1MD3 LINE L1 -127 7868 7706 1440 221 7 7 chr2 43701227 43701516 -206986338 - AluJo SINE Alu -23 289 1 902 207 28 94 chr2 43701516 43701758 -206986096 - L1MD3 LINE L1 -289 7706 7421 322 295 80 9 chr2 43701842 43701954 -206985900 + MIR SINE MIR 41 160 -102 31 0 0 0 chr2 43703347 43703378 -206984476 + AT_rich Low_complexity Low_complexity 1 31 0 2182 108 16 3 chr2 43703429 43703735 -206984119 - AluSg SINE Alu 0 310 1 231 100 0 0 chr2 43703754 43703794 -206984060 - Alu SINE Alu -1 301 262 257 343 56 0 chr2 43703815 43703958 -206983896 - L1ME3A LINE L1 -32 6138 5988 302 175 95 0 chr2 43704402 43704465 -206983389 - MIR SINE MIR -70 192 124 293 250 50 0 chr2 43704530 43704630 -206983224 + MER113 DNA MER1_type? 2 106 -415 2094 115 3 0 chr2 43704650 43704970 -206982884 + AluSp SINE Alu 1 321 0 2349 130 220 133 chr2 43704982 43705514 -206982340 - L1MC3 LINE L1 -22 7763 7051 330 210 0 49 chr2 43705514 43705595 -206982259 - MLT1F1 LTR MaLR -445 122 46 2349 130 220 133 chr2 43705595 43705853 -206982001 - L1MC3 LINE L1 -734 7051 6817 274 231 62 0 chr2 43705953 43706018 -206981836 + MER113 DNA MER1_type? 320 388 -133 2074 141 7 3 chr2 43706839 43707145 -206980709 - AluSx SINE Alu -2 310 4 258 293 71 10 chr2 43707849 43707948 -206979906 + MIR3 SINE MIR 2 106 -102 1003 175 179 45 chr2 43708176 43708467 -206979387 - L1ME3A LINE L1 -88 6082 5753 25 0 0 0 chr2 43708741 43708766 -206979088 + AT_rich Low_complexity Low_complexity 1 25 0 185 237 0 0 chr2 43708941 43708979 -206978875 - L2 LINE L2 -4 3268 3231 1471 220 137 23 chr2 43709537 43710033 -206977821 - MLT1H1 LTR MaLR -10 585 6 1776 173 25 0 chr2 43710072 43710355 -206977499 - AluJb SINE Alu -22 290 1 319 307 80 12 chr2 43710525 43710688 -206977166 - L1MC4 LINE L1 -1 8041 7868 2053 138 3 16 chr2 43710915 43711227 -206976627 - AluSx SINE Alu -4 308 1 2402 87 0 0 chr2 43711233 43711543 -206976311 - AluSg SINE Alu 0 310 1 461 287 171 31 chr2 43712285 43712543 -206975311 - L3b LINE CR1 -71 1512 1219 3146 128 62 8 chr2 43713020 43713520 -206974334 + MER1A DNA MER1_type 1 527 0 622 230 0 30 chr2 43713830 43713965 -206973889 - FLAM_A SINE Alu -2 131 1 1321 181 13 4 chr2 43714202 43714439 -206973415 - MER8 DNA MER2_type 0 239 1 2112 116 0 26 chr2 43714638 43714949 -206972905 + AluSx SINE Alu 1 303 -9 7555 116 48 20 chr2 43715185 43716406 -206971448 + Tigger1 DNA MER2_type 1 1254 -1164 1848 164 10 7 chr2 43716406 43716580 -206971274 - AluJb SINE Alu -6 306 134 231 114 0 0 chr2 43716580 43716624 -206971230 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2083 124 0 0 chr2 43716624 43716906 -206970948 - AluSq SINE Alu -31 282 1 1848 164 10 7 chr2 43716906 43717035 -206970819 - AluJb SINE Alu -177 135 1 30 0 0 0 chr2 43717187 43717217 -206970637 + AT_rich Low_complexity Low_complexity 1 30 0 1541 188 66 6 chr2 43717297 43717616 -206970238 + MER58B DNA MER1_type 4 341 0 2190 80 0 24 chr2 43717785 43718107 -206969747 - AluY SINE Alu 0 315 1 3432 175 50 15 chr2 43719044 43719770 -206968084 - L1MB8 LINE L1 0 6178 5428 3279 156 65 5 chr2 43719770 43720399 -206967455 - L1MB4 LINE L1 0 6180 5510 3297 158 59 5 chr2 43719787 43720401 -206967453 - L1MB4 LINE L1 -26 6154 5508 406 165 0 35 chr2 43720404 43720489 -206967365 - L1MB4 LINE L1 -791 5387 5306 * 547 266 115 27 chr2 43720474 43720812 -206967042 - L1ME LINE L1 -538 5632 5265 203 321 38 0 chr2 43720891 43720944 -206966910 + L2 LINE L2 3201 3255 -17 1492 144 13 47 chr2 43721267 43721380 -206966474 + L1MA8 LINE L1 5999 6114 -177 2085 104 4 0 chr2 43721380 43721696 -206966158 + AluSg SINE Alu 1 317 0 1492 144 13 47 chr2 43721696 43721879 -206965975 + L1MA8 LINE L1 6114 6286 -5 1203 176 83 70 chr2 43722107 43722409 -206965445 - AluJb SINE Alu -6 306 1 21 0 0 0 chr2 43722476 43722497 -206965357 + AT_rich Low_complexity Low_complexity 1 21 0 1467 172 102 25 chr2 43722591 43722916 -206964938 + Tigger2a DNA MER2_type 1 350 -84 1957 158 0 3 chr2 43723133 43723443 -206964411 - AluSx SINE Alu -3 309 1 365 290 91 16 chr2 43724590 43724776 -206963078 - L2 LINE L2 -926 2388 2189 425 355 47 61 chr2 43724836 43725264 -206962590 - L2 LINE L2 -1324 1990 1569 261 0 0 0 chr2 43725710 43725739 -206962115 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1111 163 126 29 chr2 43726044 43726283 -206961571 - AluJo SINE Alu -15 297 36 1589 155 127 29 chr2 43728579 43728718 -206959136 - MER7A DNA MER2_type -2693 345 221 3238 138 33 6 chr2 43728718 43729231 -206958623 - MER1A DNA MER1_type 0 527 1 1589 155 127 29 chr2 43729231 43729407 -206958447 - MER7A DNA MER2_type -2817 221 1 258 361 41 10 chr2 43730487 43730584 -206957270 + L2 LINE L2 2659 2758 -556 338 354 50 17 chr2 43731195 43731376 -206956478 - L2 LINE L2 -421 2893 2707 606 217 37 12 chr2 43731385 43731546 -206956308 + MER104 DNA Tc2 16 180 0 1197 234 78 5 chr2 43731787 43732158 -206955696 + L1M4 LINE L1 4944 5341 -805 1868 160 0 22 chr2 43732220 43732539 -206955315 + AluJb SINE Alu 1 312 0 322 204 97 21 chr2 43732541 43732634 -206955220 + L1MB5 LINE L1 3100 3199 -2947 2029 161 77 0 chr2 43732685 43733064 -206954790 + L1MB5 LINE L1 5485 5892 -282 226 152 43 0 chr2 43733078 43733124 -206954730 + L1MB5 LINE L1 5987 6034 -140 2230 75 4 0 chr2 43733128 43733431 -206954423 - AluY SINE Alu 0 304 1 768 153 33 0 chr2 43733431 43733581 -206954273 + L1MB4 LINE L1 6018 6172 -8 2388 66 0 7 chr2 43735601 43735902 -206951952 + AluY SINE Alu 1 299 -12 29 28 0 0 chr2 43736423 43736459 -206951395 + AT_rich Low_complexity Low_complexity 1 36 0 2069 118 3 0 chr2 43736459 43736747 -206951107 - AluSp SINE Alu -24 289 1 2106 134 0 0 chr2 43737014 43737304 -206950550 + AluSx SINE Alu 3 292 -20 2511 74 0 3 chr2 43737766 43738077 -206949777 - AluY SINE Alu -1 310 1 959 107 0 15 chr2 43738079 43738210 -206949644 - AluJo/FLAM SINE Alu -181 131 3 2096 119 7 0 chr2 43738219 43738513 -206949341 - AluSx SINE Alu -16 296 1 202 224 0 20 chr2 43739174 43739223 -206948631 + GA-rich Low_complexity Low_complexity 4 51 0 2445 79 0 0 chr2 43741446 43741750 -206946104 - AluSc SINE Alu -5 304 1 2103 96 0 4 chr2 43741799 43742071 -206945783 - AluSc SINE Alu -33 276 6 1882 143 13 32 chr2 43742151 43742465 -206945389 - AluJb SINE Alu -4 308 1 391 326 82 30 chr2 43742574 43742709 -206945145 - MER5B DNA MER1_type -20 158 17 1733 119 32 77 chr2 43743140 43743452 -206944402 - AluSx SINE Alu -14 298 1 974 141 0 0 chr2 43743452 43743587 -206944267 - AluSq/x SINE Alu -177 135 1 1713 163 11 0 chr2 43744412 43744689 -206943165 - AluJo SINE Alu -30 282 3 21 0 0 0 chr2 43744698 43744719 -206943135 + AT_rich Low_complexity Low_complexity 1 21 0 226 338 122 0 chr2 43744773 43744912 -206942942 + MIR SINE MIR 51 206 -56 293 250 45 114 chr2 43744930 43745052 -206942802 - L2 LINE L2 -896 2418 2309 558 264 167 22 chr2 43745052 43745279 -206942575 + MIR SINE MIR 1 260 -2 866 200 30 1 chr2 43746163 43746463 -206941391 - MER2 DNA MER2_type 0 345 6 1643 191 7 3 chr2 43746492 43746785 -206941069 - AluJo SINE Alu -18 294 1 23 0 0 0 chr2 43747297 43747320 -206940534 + AT_rich Low_complexity Low_complexity 1 23 0 744 280 175 50 chr2 43747438 43747820 -206940034 - L2 LINE L2 0 3313 2884 203 246 82 0 chr2 43748148 43748209 -206939645 + MIR3 SINE MIR 112 177 -31 1314 158 10 5 chr2 43748324 43748533 -206939321 + AluJo SINE Alu 1 210 -102 1775 182 7 0 chr2 43748944 43749241 -206938613 - AluJb SINE Alu -13 299 1 22 0 0 0 chr2 43749330 43749352 -206938502 + AT_rich Low_complexity Low_complexity 1 22 0 1927 98 94 4 chr2 43749868 43750144 -206937710 + AluSx SINE Alu 1 301 -11 646 142 47 0 chr2 43750524 43750630 -206937224 - AluSp SINE Alu -202 111 1 185 299 26 39 chr2 43751805 43751882 -206935972 + MIR3 SINE MIR 132 207 -1 1075 201 94 10 chr2 43753118 43753417 -206934437 - MER33 DNA MER1_type 0 324 1 419 260 31 0 chr2 43753489 43753585 -206934269 + MIR3 SINE MIR 98 196 -12 234 288 47 13 chr2 43753705 43753783 -206934071 - MIR SINE MIR -125 83 3 518 281 88 56 chr2 43754207 43754492 -206933362 + MER102a DNA MER1_type 2 295 -35 192 239 125 34 chr2 43754699 43754787 -206933067 - MIR SINE MIR -54 208 113 2426 78 3 0 chr2 43755618 43755914 -206931940 - AluSg SINE Alu -13 297 1 2081 137 0 3 chr2 43756338 43756651 -206931203 + AluSx SINE Alu 1 312 0 2109 125 7 7 chr2 43756701 43756996 -206930858 + AluSq SINE Alu 3 297 -16 2422 163 95 26 chr2 43757166 43757509 -206930345 - L1PA16 LINE L1 -330 5836 5518 2343 64 0 55 chr2 43757509 43757821 -206930033 - AluY SINE Alu -16 295 1 216 0 0 0 chr2 43757829 43757853 -206930001 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2422 163 95 26 chr2 43757853 43758130 -206929724 - L1PA16 LINE L1 -654 5512 5177 25 31 0 0 chr2 43758317 43758349 -206929505 + AT_rich Low_complexity Low_complexity 1 32 0 1481 171 131 10 chr2 43758445 43758750 -206929104 - MER2 DNA MER2_type -1 343 2 2251 106 0 3 chr2 43759159 43759460 -206928394 + AluSg SINE Alu 1 300 -10 380 246 51 46 chr2 43759552 43759734 -206928120 + MIR SINE MIR 2 212 -50 346 344 93 38 chr2 43760067 43760358 -206927496 + L2 LINE L2 3005 3311 -2 1539 156 25 22 chr2 43760461 43760736 -206927118 - AluJb SINE Alu -33 279 4 22 80 0 0 chr2 43761540 43761590 -206926264 + AT_rich Low_complexity Low_complexity 1 50 0 594 331 52 0 chr2 43761762 43762013 -206925841 + L1MC4a LINE L1 5665 5928 -1880 207 0 0 0 chr2 43763115 43763138 -206924716 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 623 175 8 33 chr2 43763138 43763258 -206924596 - FLAM_A SINE Alu -16 117 1 239 271 47 47 chr2 43763422 43763507 -206924347 + MIR3 SINE MIR 111 195 -13 747 217 64 72 chr2 43763571 43763634 -206924220 + MIR SINE MIR 12 74 -188 2144 125 0 3 chr2 43763634 43763946 -206923908 - AluY SINE Alu 0 311 1 747 217 64 72 chr2 43763946 43764117 -206923737 + MIR SINE MIR 74 244 -18 484 319 179 16 chr2 43767343 43767779 -206920075 + L2 LINE L2 2035 2541 -773 1840 144 0 59 chr2 43767833 43768153 -206919701 + AluSx SINE Alu 1 301 -11 21 57 0 0 chr2 43768370 43768405 -206919449 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 43768455 43768484 -206919370 + AT_rich Low_complexity Low_complexity 1 29 0 1832 151 0 17 chr2 43768494 43768786 -206919068 + AluJo SINE Alu 3 289 -23 25 31 0 0 chr2 43768786 43768818 -206919036 + AT_rich Low_complexity Low_complexity 1 32 0 1128 275 161 17 chr2 43768827 43769446 -206918408 + L1ME3A LINE L1 4459 4987 -1175 2185 108 7 16 chr2 43769446 43769753 -206918101 - AluSx SINE Alu -8 304 1 1128 275 161 17 chr2 43769753 43770101 -206917753 + L1ME3A LINE L1 4987 5559 -603 1528 264 63 16 chr2 43770268 43770835 -206917019 + L1ME3A LINE L1 5565 6169 -1 1666 147 38 3 chr2 43771156 43771448 -206916406 - AluJo SINE Alu -10 302 1 22 56 0 0 chr2 43771595 43771631 -206916223 + AT_rich Low_complexity Low_complexity 1 36 0 2178 102 3 3 chr2 43771663 43771956 -206915898 - AluSg1 SINE Alu -16 293 1 2048 135 0 3 chr2 43772461 43772758 -206915096 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr2 43774525 43774546 -206913308 + (TC)n Simple_repeat Simple_repeat 2 22 0 314 243 0 14 chr2 43774886 43774960 -206912894 - Tigger5 DNA MER2_type 0 2323 2251 236 273 0 0 chr2 43774929 43774984 -206912870 - Tigger5 DNA MER2_type -2268 55 1 * 2423 161 7 49 chr2 43777414 43777724 -206910130 - L1MB7 LINE L1 -9 6175 5888 2267 100 13 0 chr2 43777724 43778033 -206909821 - AluSq SINE Alu 0 313 1 2423 161 7 49 chr2 43778033 43778174 -206909680 - L1MB7 LINE L1 -296 5888 5743 235 317 29 48 chr2 43778830 43778934 -206908920 + MIR SINE MIR 43 144 -64 26 50 0 0 chr2 43780195 43780235 -206907619 + AT_rich Low_complexity Low_complexity 1 40 0 773 188 14 0 chr2 43780257 43780401 -206907453 - L1MA6 LINE L1 -5 6295 6150 274 203 94 109 chr2 43780408 43780536 -206907318 - MIR SINE MIR -74 188 63 2294 107 0 0 chr2 43780581 43780881 -206906973 - AluSx SINE Alu -12 300 1 2494 63 0 0 chr2 43781691 43781993 -206905861 + AluY SINE Alu 1 302 -9 349 257 33 86 chr2 43782737 43782889 -206904965 - L2 LINE L2 -4 3309 3166 1991 107 11 0 chr2 43782908 43783171 -206904683 + AluSx SINE Alu 25 290 -22 757 148 70 0 chr2 43783185 43783300 -206904554 + FLAM_C SINE Alu 9 131 -12 22 56 0 0 chr2 43783595 43783631 -206904223 + AT_rich Low_complexity Low_complexity 1 36 0 187 290 122 38 chr2 43784496 43784532 -206903322 - MIR SINE MIR -12 250 218 2396 70 10 32 chr2 43784532 43784846 -206903008 - AluY SINE Alu -4 307 1 187 290 122 38 chr2 43784846 43784940 -206902914 - MIR SINE MIR -44 218 109 207 0 0 0 chr2 43785689 43785712 -206902142 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1946 126 11 3 chr2 43785717 43786002 -206901852 - AluSq SINE Alu -26 287 1 1722 141 45 24 chr2 43786269 43786560 -206901294 + AluJb SINE Alu 2 298 -14 236 88 0 0 chr2 43786585 43786619 -206901235 - L1MB8 LINE L1 -1 6177 6144 3895 170 87 37 chr2 43786637 43787171 -206900683 - L1MB7 LINE L1 -21 6163 5657 1844 161 0 40 chr2 43787171 43787495 -206900359 + AluJo SINE Alu 1 311 -1 3895 170 87 37 chr2 43787495 43787961 -206899893 - L1MB7 LINE L1 -527 5657 5114 1339 221 16 25 chr2 43787964 43788285 -206899569 - L1MB7 LINE L1 -1078 5068 4751 351 213 0 0 chr2 43788320 43788400 -206899454 + CT-rich Low_complexity Low_complexity 4 83 0 1983 144 10 3 chr2 43788402 43788693 -206899161 - AluSx SINE Alu -19 293 1 1636 122 111 8 chr2 43789338 43789600 -206898254 + AluJb SINE Alu 6 294 -18 31 44 0 0 chr2 43789894 43789939 -206897915 + AT_rich Low_complexity Low_complexity 1 45 0 802 172 0 0 chr2 43789940 43790056 -206897798 - FLAM_C SINE Alu -26 117 2 2689 107 65 81 chr2 43790287 43790605 -206897249 + MER4B LTR ERV1 1 323 -456 2247 102 0 0 chr2 43790605 43790900 -206896954 - AluY SINE Alu -16 295 1 2689 107 65 81 chr2 43790900 43790994 -206896860 + MER4B LTR ERV1 323 417 -362 2306 84 0 26 chr2 43790994 43791303 -206896551 - AluY SINE Alu -10 301 1 2689 107 65 81 chr2 43791303 43791488 -206896366 + MER4B LTR ERV1 417 770 -9 2103 102 3 33 chr2 43791693 43791997 -206895857 + AluSx SINE Alu 1 295 -17 2308 92 0 3 chr2 43792125 43792418 -206895436 + AluSx SINE Alu 2 293 -19 1517 193 7 29 chr2 43793641 43793947 -206893907 + AluJo SINE Alu 3 301 -11 403 136 17 0 chr2 43796237 43796296 -206891558 + MIR SINE MIR 2 61 -201 1526 152 81 27 chr2 43796755 43797051 -206890803 - AluJo SINE Alu 0 312 1 229 345 0 23 chr2 43797174 43797261 -206890593 - MIR SINE MIR -92 116 32 467 243 65 8 chr2 43797660 43797804 -206890050 + MIR SINE MIR 34 184 -67 771 139 0 33 chr2 43798269 43798391 -206889463 + FLAM_C SINE Alu 16 133 -10 401 330 87 23 chr2 43798406 43798579 -206889275 + MIR SINE MIR 31 214 -48 2376 64 7 3 chr2 43799149 43799445 -206888409 + AluY SINE Alu 1 297 -14 333 223 85 90 chr2 43799494 43799705 -206888149 - MLT1J LTR MaLR -138 373 164 321 314 163 15 chr2 43799781 43800106 -206887748 + L1M4 LINE L1 4286 4658 -1488 242 320 47 16 chr2 43800131 43800259 -206887595 + L1M4 LINE L1 4777 4908 -1238 489 277 130 16 chr2 43800259 43800443 -206887411 - MER3 DNA MER1_type 0 209 5 189 152 217 0 chr2 43800505 43800551 -206887303 + MER5B DNA MER1_type 123 178 0 2008 131 9 38 chr2 43801702 43802022 -206885832 + AluSx SINE Alu 1 311 -1 2023 128 17 3 chr2 43802060 43802356 -206885498 + AluSx SINE Alu 1 300 -12 1870 160 0 10 chr2 43802381 43802675 -206885179 + AluJb SINE Alu 1 291 -21 422 73 0 15 chr2 43803619 43803687 -206884167 + (TA)n Simple_repeat Simple_repeat 2 68 0 3485 155 61 27 chr2 43804593 43804647 -206883207 - L1MB8 LINE L1 0 6178 6127 2251 112 0 0 chr2 43804647 43804942 -206882912 + AluSx SINE Alu 1 295 -17 3485 155 61 27 chr2 43804942 43805544 -206882310 - L1MB8 LINE L1 -51 6127 5500 225 224 20 0 chr2 43805554 43805603 -206882251 - L1MB8 LINE L1 -1195 4951 4902 21 0 0 0 chr2 43806152 43806173 -206881681 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 43807350 43807374 -206880480 + AT_rich Low_complexity Low_complexity 1 24 0 1886 114 21 17 chr2 43812110 43812399 -206875455 + AluJb SINE Alu 2 291 -21 1967 119 3 33 chr2 43812594 43812897 -206874957 - AluSx SINE Alu -2 310 17 249 158 146 82 chr2 43812978 43813086 -206874768 + L1MC5 LINE L1 7545 7668 -293 2130 136 0 0 chr2 43813086 43813388 -206874466 + AluSx SINE Alu 1 302 -10 249 158 146 82 chr2 43813388 43813437 -206874417 + L1MC5 LINE L1 7668 7712 -249 346 244 281 12 chr2 43813611 43813771 -206874083 - MIR SINE MIR -52 210 8 341 226 80 51 chr2 43814908 43815045 -206872809 - L2 LINE L2 -3 3310 3170 911 226 193 35 chr2 43815309 43815791 -206872063 + L1MD2 LINE L1 5785 6342 -17 180 179 0 0 chr2 43817609 43817648 -206870206 + CT-rich Low_complexity Low_complexity 2 40 0 415 368 31 5 chr2 43817725 43817948 -206869906 - L1ME3 LINE L1 -67 6095 5867 2056 197 198 43 chr2 43822103 43822618 -206865236 - Charlie2 DNA MER1_type -6 2856 2423 2213 102 3 0 chr2 43822618 43822911 -206864943 + AluY SINE Alu 1 294 -17 2056 197 198 43 chr2 43822911 43823148 -206864706 - Charlie2 DNA MER1_type -439 2423 2224 2365 105 0 0 chr2 43823148 43823452 -206864402 + AluSp SINE Alu 1 304 -9 2056 197 198 43 chr2 43823452 43823565 -206864289 - Charlie2 DNA MER1_type -638 2224 1855 497 276 135 24 chr2 43823535 43823832 -206864022 - Charlie2 DNA MER1_type -2435 347 18 * 1453 161 82 14 chr2 43824544 43824823 -206863031 + AluJo SINE Alu 1 298 -14 24 67 0 0 chr2 43824858 43824903 -206862951 + AT_rich Low_complexity Low_complexity 1 45 0 1351 137 184 20 chr2 43824957 43825212 -206862642 - AluSx SINE Alu -15 297 1 722 310 71 15 chr2 43825221 43825614 -206862240 + L1MC4 LINE L1 5421 5835 -1973 2312 95 3 0 chr2 43825687 43825983 -206861871 + AluSp SINE Alu 1 297 -16 2311 217 140 81 chr2 43826029 43826685 -206861169 + L1MC4 LINE L1 6848 7464 -578 2136 129 0 3 chr2 43826685 43826979 -206860875 + AluSc SINE Alu 2 294 -15 2311 217 140 81 chr2 43826979 43827055 -206860799 + L1MC4 LINE L1 7464 7534 -508 3190 149 51 27 chr2 43827055 43827678 -206860176 + L1MB8 LINE L1 5536 6173 -5 2311 217 140 81 chr2 43827678 43828072 -206859782 + L1MC4 LINE L1 7534 8042 0 23 0 0 0 chr2 43829181 43829204 -206858650 + AT_rich Low_complexity Low_complexity 1 23 0 1854 154 3 33 chr2 43829739 43830044 -206857810 + AluJb SINE Alu 1 296 -16 1475 185 83 0 chr2 43830230 43830495 -206857359 - AluJo SINE Alu -25 287 1 1588 187 19 22 chr2 43831960 43832324 -206855530 + L1MB8 LINE L1 5816 6178 0 522 300 92 13 chr2 43832891 43833118 -206854736 - MIR SINE MIR 0 262 18 2489 90 0 0 chr2 43833762 43834073 -206853781 - AluSx SINE Alu -1 311 1 432 195 16 57 chr2 43834075 43834198 -206853656 - AluJb SINE Alu -10 302 185 1027 234 47 38 chr2 43834199 43834541 -206853313 + L2 LINE L2 2962 3306 -7 1832 164 17 7 chr2 43834692 43834985 -206852869 + AluJb SINE Alu 1 296 -16 1622 181 13 20 chr2 43835355 43835659 -206852195 - AluJo SINE Alu -10 302 1 1316 198 34 4 chr2 43836054 43836317 -206851537 - L1M4 LINE L1 -544 5640 5370 594 226 0 44 chr2 43836898 43837035 -206850819 + FLAM_A SINE Alu 2 132 -1 347 216 36 63 chr2 43837062 43837173 -206850681 + L1ME2 LINE L1 5770 5877 -285 572 261 31 0 chr2 43837173 43837303 -206850551 + FRAM SINE Alu 1 133 -43 706 222 87 34 chr2 43837303 43837510 -206850344 + L1ME2 LINE L1 5912 6129 -35 833 108 8 16 chr2 43837944 43838073 -206849781 - FLAM_C SINE Alu -5 128 1 315 184 48 48 chr2 43838361 43838464 -206849390 - MIR SINE MIR -132 130 28 688 188 123 6 chr2 43840466 43840636 -206847218 - MIR SINE MIR -68 194 5 2105 125 6 16 chr2 43840911 43841224 -206846630 - AluJb SINE Alu -2 310 1 1683 11 0 0 chr2 43842139 43842319 -206845535 + AluY SINE Alu 123 302 -9 2143 137 0 0 chr2 43843392 43843698 -206844156 + AluSq SINE Alu 1 306 -7 2025 128 21 0 chr2 43844195 43844484 -206843370 + AluJb SINE Alu 1 295 -17 200 264 100 0 chr2 43844504 43844585 -206843269 + MIR SINE MIR 32 123 -85 287 266 0 13 chr2 43845265 43845344 -206842510 + MIR SINE MIR 47 124 -84 318 174 330 0 chr2 43846650 43846765 -206841089 + MIR SINE MIR 96 248 -14 193 138 0 0 chr2 43846869 43846898 -206840956 + L2 LINE L2 3226 3254 -18 2420 93 0 0 chr2 43848389 43848699 -206839155 + AluY SINE Alu 1 310 -1 976 176 118 0 chr2 43848865 43849052 -206838802 + MER3 DNA MER1_type 1 209 0 1965 147 13 7 chr2 43849136 43849436 -206838418 + AluJo SINE Alu 1 302 -10 575 259 105 22 chr2 43851076 43851304 -206836550 + MIR SINE MIR 16 262 0 1312 91 10 35 chr2 43851347 43851544 -206836310 - AluSg/x SINE Alu 0 312 121 339 25 0 0 chr2 43851611 43851651 -206836203 + (TG)n Simple_repeat Simple_repeat 1 40 0 1245 128 44 0 chr2 43851663 43851866 -206835988 - L1MB3 LINE L1 -39 6144 5933 1908 147 0 13 chr2 43851867 43852167 -206835687 - AluJb SINE Alu -15 297 2 313 184 312 37 chr2 43852182 43852291 -206835563 + L2 LINE L2 3134 3272 0 1793 162 16 23 chr2 43852587 43852896 -206834958 + AluJo SINE Alu 3 309 -3 401 262 74 47 chr2 43853071 43853095 -206834759 + L1ME4a LINE L1 5593 5615 -506 2353 67 7 23 chr2 43853095 43853395 -206834459 + AluSc SINE Alu 1 295 -14 401 262 74 47 chr2 43853395 43853626 -206834228 + L1ME4a LINE L1 5615 5855 -266 836 233 147 22 chr2 43853664 43854092 -206833762 - MLT1J LTR MaLR -1 510 1 290 198 190 33 chr2 43854121 43854242 -206833612 + L1ME4a LINE L1 5981 6120 -1 2373 84 10 0 chr2 43854537 43854834 -206833020 + AluSp SINE Alu 1 300 -13 482 244 107 66 chr2 43855653 43855756 -206832098 - L1MC/D LINE L1 -2009 5799 5702 1660 178 21 11 chr2 43855756 43856043 -206831811 + AluJo SINE Alu 1 290 -22 207 0 0 0 chr2 43856043 43856066 -206831788 + (TG)n Simple_repeat Simple_repeat 2 24 0 482 244 107 66 chr2 43856066 43856203 -206831651 - L1MC/D LINE L1 -2105 5703 5548 308 256 16 39 chr2 43856420 43856549 -206831305 - L1MC/D LINE L1 -662 5504 5379 2391 95 0 0 chr2 43856774 43857070 -206830784 + AluSc SINE Alu 1 296 -13 654 178 76 54 chr2 43857207 43857265 -206830589 + MER53 DNA DNA 1 56 -133 477 167 167 83 chr2 43857265 43857385 -206830469 + FLAM_A SINE Alu 1 130 -3 654 178 76 54 chr2 43857385 43857511 -206830343 + MER53 DNA DNA 56 189 0 2510 175 46 28 chr2 43857547 43857951 -206829903 - MLT1D LTR MaLR 0 505 88 2251 99 3 0 chr2 43857951 43858270 -206829584 - AluSx SINE Alu 0 320 1 2510 175 46 28 chr2 43858270 43858360 -206829494 - MLT1D LTR MaLR -417 88 1 191 256 70 23 chr2 43858496 43858582 -206829272 + L2 LINE L2 3179 3268 -4 2271 119 0 0 chr2 43859307 43859609 -206828245 - AluSx SINE Alu -7 305 4 231 279 16 0 chr2 43860162 43860223 -206827631 - L2 LINE L2 0 3313 3252 2322 78 3 7 chr2 43860818 43861112 -206826742 - AluSc SINE Alu -16 293 1 3198 110 25 41 chr2 43863578 43863936 -206823918 - MER34B LTR ERV1 -54 511 162 2469 93 0 0 chr2 43863936 43864249 -206823605 + AluSq SINE Alu 1 313 0 3198 110 25 41 chr2 43864249 43864407 -206823447 - MER34B LTR ERV1 -403 162 3 281 338 56 14 chr2 43864860 43865002 -206822852 + L2 LINE L2 3087 3234 -38 2287 102 0 0 chr2 43865047 43865342 -206822512 - AluSp SINE Alu -18 295 1 296 299 8 34 chr2 43865990 43866107 -206821747 + MIR3 SINE MIR 8 121 -87 435 226 110 92 chr2 43866450 43866496 -206821358 - L1ME4a LINE L1 -53 6068 6024 1108 174 186 52 chr2 43866496 43866840 -206821014 - MLT1B LTR MaLR 0 390 1 435 226 110 92 chr2 43866840 43866953 -206820901 - L1ME4a LINE L1 -97 6024 5914 2130 135 3 0 chr2 43866953 43867264 -206820590 - AluSx SINE Alu 0 312 1 435 226 110 92 chr2 43867264 43867440 -206820414 - L1ME4a LINE L1 -207 5914 5726 259 330 116 0 chr2 43867473 43867585 -206820269 - L1ME4a LINE L1 -477 5644 5520 1263 213 0 14 chr2 43867595 43867881 -206819973 - L1MD3 LINE L1 0 7995 7714 2916 3 0 0 chr2 43869643 43869949 -206817905 - AluYa5 SINE Alu -5 306 1 2418 176 29 2 chr2 43870540 43870989 -206816865 - LOR1b LTR ERV1 0 461 1 638 238 25 19 chr2 43871098 43871258 -206816596 + MIR SINE MIR 86 246 -16 610 217 65 148 chr2 43871281 43871328 -206816526 - MLT1J LTR MaLR -60 451 402 2226 118 0 0 chr2 43871328 43871625 -206816229 + AluSx SINE Alu 3 299 -13 610 217 65 148 chr2 43871625 43871834 -206816020 - MLT1J LTR MaLR -109 402 227 2285 116 0 0 chr2 43871834 43872128 -206815726 - AluSx SINE Alu -18 294 1 610 217 65 148 chr2 43872128 43872207 -206815647 - MLT1J LTR MaLR -284 227 143 417 269 84 0 chr2 43872190 43872309 -206815545 - MLT1J LTR MaLR -312 199 71 * 517 71 0 14 chr2 43872556 43872626 -206815228 + MER4B LTR ERV1 1 69 -595 1598 101 34 22 chr2 43872639 43872941 -206814913 + MER4B LTR ERV1 261 610 0 911 241 104 21 chr2 43873131 43873467 -206814387 + HAL1 LINE L1 11 374 -2133 368 45 0 0 chr2 43873467 43873511 -206814343 + AluY SINE Alu 1 44 -259 2096 176 5 35 chr2 43873639 43873720 -206814134 - MER47A DNA MER2_type -1959 364 282 1739 170 17 14 chr2 43873720 43874014 -206813840 + AluJo SINE Alu 1 295 -17 2096 176 5 35 chr2 43874014 43874307 -206813547 - MER47A DNA MER2_type -2041 282 1 551 266 102 44 chr2 43874876 43875024 -206812830 + L1MC4a LINE L1 5673 5811 -1997 2078 113 51 0 chr2 43875024 43875316 -206812538 + AluSq SINE Alu 1 307 -6 551 266 102 44 chr2 43875316 43875441 -206812413 + L1MC4a LINE L1 5811 5962 -1846 241 252 122 9 chr2 43875698 43875805 -206812049 + L1ME4a LINE L1 5972 6090 -31 2384 91 0 0 chr2 43875989 43876340 -206811514 + AluY SINE Alu 1 311 0 343 179 44 77 chr2 43876984 43877092 -206810762 - L1MEd LINE L1 -751 5378 5284 2063 137 3 10 chr2 43877092 43877406 -206810448 - AluJb SINE Alu 0 312 1 343 179 44 77 chr2 43877406 43877460 -206810394 - L1MEd LINE L1 -845 5284 5230 189 0 0 0 chr2 43877577 43877598 -206810256 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 934 157 0 7 chr2 43878021 43878168 -206809686 + AluJb SINE Alu 149 294 -18 283 244 17 11 chr2 43879129 43879305 -206808549 + (TA)n Simple_repeat Simple_repeat 2 178 0 198 118 0 0 chr2 43879468 43879502 -206808352 + (TA)n Simple_repeat Simple_repeat 2 35 0 1785 156 21 7 chr2 43879502 43879785 -206808069 - AluJo SINE Alu -25 287 1 815 150 0 0 chr2 43879820 43879966 -206807888 + AluSg/x SINE Alu 170 315 0 2167 177 171 0 chr2 43879981 43880421 -206807433 + MLT2B2 LTR ERVL 1 515 0 971 118 0 0 chr2 43880451 43880578 -206807276 + FLAM_C SINE Alu 1 127 -6 930 277 127 22 chr2 43880578 43881171 -206806683 - L1MEd LINE L1 -1111 5018 4364 2027 136 0 7 chr2 43881195 43881490 -206806364 - AluJb SINE Alu -19 293 1 1784 148 54 3 chr2 43881515 43881812 -206806042 - AluSx SINE Alu 0 312 1 882 143 0 0 chr2 43881812 43881938 -206805916 - AluJo SINE Alu -176 136 11 632 300 61 32 chr2 43881949 43882326 -206805528 - L1MEd LINE L1 -2417 3712 3325 1925 140 3 3 chr2 43882493 43882785 -206805069 + AluSx SINE Alu 1 292 -20 503 250 98 83 chr2 43883299 43883490 -206804364 - L1MEd LINE L1 -2866 3263 3076 2134 116 0 17 chr2 43883490 43883653 -206804201 - AluSx SINE Alu -16 296 139 2443 70 3 0 chr2 43883653 43883953 -206803901 - AluY SINE Alu -10 301 1 2134 116 0 17 chr2 43883953 43884090 -206803764 - AluSx SINE Alu -173 139 1 503 250 98 83 chr2 43884090 43884272 -206803582 - L1MEd LINE L1 -3053 3076 2898 2142 125 3 3 chr2 43884272 43884567 -206803287 - AluSp SINE Alu -18 295 1 503 250 98 83 chr2 43884567 43884592 -206803262 - L1MEd LINE L1 -3231 2898 2875 2219 116 0 7 chr2 43884592 43884895 -206802959 + AluSg SINE Alu 1 301 -9 503 250 98 83 chr2 43884895 43885014 -206802840 - L1MEd LINE L1 -3254 2875 2736 1599 131 45 4 chr2 43885225 43885469 -206802385 - AluJb SINE Alu -12 300 47 7549 177 30 93 chr2 43885469 43887338 -206800516 + MER52A LTR ERV1 1 1753 -2 264 170 31 15 chr2 43887344 43887409 -206800445 - AluS SINE Alu -249 59 3 26 30 0 0 chr2 43887409 43887442 -206800412 + AT_rich Low_complexity Low_complexity 1 33 0 2114 130 16 3 chr2 43887469 43887777 -206800077 + AluJb SINE Alu 1 312 0 2040 257 45 30 chr2 43888046 43888707 -206799147 - L1MC4a LINE L1 -1841 5950 5280 749 300 56 40 chr2 43888918 43889533 -206798321 - L1MC4a LINE L1 -1071 5058 4430 2070 145 0 0 chr2 43889533 43889830 -206798024 - AluSx SINE Alu -15 297 1 749 300 56 40 chr2 43889830 43889871 -206797983 - L1MC4a LINE L1 -1699 4430 4391 249 284 80 56 chr2 43890528 43890778 -206797076 - L1MEd LINE L1 -3575 2554 2299 340 177 29 6 chr2 43890977 43891047 -206796807 - Alu SINE Alu -1 300 236 1150 146 4 131 chr2 43891055 43891330 -206796524 - AluJo SINE Alu -50 262 23 2735 93 25 3 chr2 43891633 43891998 -206795856 - THE1C LTR MaLR -2 373 1 26 0 0 0 chr2 43892154 43892180 -206795674 + AT_rich Low_complexity Low_complexity 1 26 0 564 285 112 50 chr2 43892195 43893163 -206794691 - L1MEd LINE L1 -825 1665 663 781 300 45 5 chr2 43893472 43893695 -206794159 + MLT1I LTR MaLR 164 395 -14 252 86 29 0 chr2 43893741 43893806 -206794048 + Alu SINE Alu 244 309 0 1917 134 105 123 chr2 43893810 43893960 -206793894 + L1MA6 LINE L1 5802 5953 -347 1654 138 3 57 chr2 43893960 43894243 -206793611 + AluSx SINE Alu 1 268 -44 1917 134 105 123 chr2 43894243 43894380 -206793474 + L1MA6 LINE L1 5953 6091 -209 700 216 24 0 chr2 43894380 43894505 -206793349 + FLAM_A SINE Alu 2 129 -4 1917 134 105 123 chr2 43894505 43894594 -206793260 + L1MA6 LINE L1 6091 6180 -120 1966 128 44 10 chr2 43894594 43894891 -206792963 + AluSx SINE Alu 1 307 -5 1917 134 105 123 chr2 43894891 43894998 -206792856 + L1MA6 LINE L1 6180 6278 -22 2076 122 21 0 chr2 43895016 43895304 -206792550 + AluSx SINE Alu 3 296 -16 1838 152 0 4 chr2 43895382 43895659 -206792195 - AluJb SINE Alu -26 286 11 2332 107 0 3 chr2 43895738 43896048 -206791806 + AluSg SINE Alu 1 309 -1 1143 126 27 27 chr2 43896060 43896433 -206791421 - L1MB4 LINE L1 -13 6167 5716 297 164 33 0 chr2 43896711 43896772 -206791082 - L1MB2 LINE L1 -3 6168 6106 2334 76 0 52 chr2 43897271 43897600 -206790254 - AluSx SINE Alu 0 312 1 2351 91 0 25 chr2 43897988 43898308 -206789546 + AluSq SINE Alu 1 312 -1 525 281 46 7 chr2 43898310 43898463 -206789391 + MIR SINE MIR 28 186 -76 2295 107 3 3 chr2 43898555 43898863 -206788991 + AluSq SINE Alu 1 308 -5 430 349 145 24 chr2 43899236 43899491 -206788363 - L2 LINE L2 0 3272 2987 24 32 0 0 chr2 43899544 43899575 -206788279 + AT_rich Low_complexity Low_complexity 1 31 0 336 307 40 45 chr2 43900106 43900186 -206787668 + L1ME LINE L1 5461 5540 -581 1976 171 96 6 chr2 43900186 43900549 -206787305 + MSTD LTR MaLR 1 396 0 336 307 40 45 chr2 43900549 43900670 -206787184 + L1ME LINE L1 5540 5661 -460 216 346 112 44 chr2 43901225 43901546 -206786308 + L2 LINE L2 2539 2881 -433 193 315 19 0 chr2 43901627 43901681 -206786173 + L2 LINE L2 3003 3057 -215 1421 110 9 14 chr2 43903247 43903466 -206784388 + AluSg/x SINE Alu 85 302 -10 23 0 0 0 chr2 43904116 43904139 -206783715 + AT_rich Low_complexity Low_complexity 1 23 0 2016 126 3 7 chr2 43905373 43905667 -206782187 + AluJb SINE Alu 5 297 -15 2057 132 13 13 chr2 43906227 43906537 -206781317 + AluSx SINE Alu 3 312 0 2198 140 0 0 chr2 43906885 43907193 -206780661 + AluSx SINE Alu 2 309 -3 361 197 14 0 chr2 43907562 43907633 -206780221 - ERVL LTR ERVL -2943 2821 2750 1621 186 0 4 chr2 43908132 43908401 -206779453 + AluJb SINE Alu 1 268 -44 441 0 0 0 chr2 43908411 43908460 -206779394 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1594 199 9 22 chr2 43908515 43908831 -206779023 + AluJb SINE Alu 1 312 0 2064 132 14 3 chr2 43908875 43909171 -206778683 + AluSx SINE Alu 1 299 -13 2167 107 7 3 chr2 43909803 43910103 -206777751 + AluSx SINE Alu 1 301 -11 186 71 0 0 chr2 43910982 43911010 -206776844 + (A)n Simple_repeat Simple_repeat 1 28 0 1330 212 79 3 chr2 43911010 43911326 -206776528 + L1MB7 LINE L1 3951 4290 -1856 1484 158 31 73 chr2 43911326 43911504 -206776350 + MLT2B3 LTR ERVL 1 163 -391 2035 125 4 0 chr2 43911504 43911809 -206776045 + AluSx SINE Alu 1 306 0 1484 158 31 73 chr2 43911809 43911946 -206775908 + MLT2B3 LTR ERVL 163 304 -250 4567 152 72 114 chr2 43911947 43912217 -206775637 + L1MB7 LINE L1 4398 4678 -1506 1735 170 13 35 chr2 43912217 43912534 -206775320 + AluJo SINE Alu 1 310 -2 4567 152 72 114 chr2 43912534 43912619 -206775235 + L1MB7 LINE L1 4678 4765 -1419 889 99 0 0 chr2 43912619 43912740 -206775114 + AluSp/q SINE Alu 189 309 -4 4567 152 72 114 chr2 43912740 43913068 -206774786 + L1MB7 LINE L1 4765 5105 -1079 2293 92 0 16 chr2 43913068 43913372 -206774482 + AluSq SINE Alu 1 299 -14 4567 152 72 114 chr2 43913372 43914454 -206773400 + L1MB7 LINE L1 5105 6184 0 2249 124 0 0 chr2 43915703 43916010 -206771844 + AluSq SINE Alu 1 307 -6 507 100 14 0 chr2 43916240 43916310 -206771544 + FLAM SINE Alu 63 133 -10 33 66 0 0 chr2 43917252 43917313 -206770541 + AT_rich Low_complexity Low_complexity 1 61 0 1985 133 0 17 chr2 43917315 43917608 -206770246 - AluSx SINE Alu -23 289 2 195 129 0 0 chr2 43917634 43917665 -206770189 + (A)n Simple_repeat Simple_repeat 1 31 0 2231 97 14 0 chr2 43917699 43917989 -206769865 - AluSq SINE Alu -19 294 1 21 0 0 0 chr2 43918525 43918546 -206769308 + AT_rich Low_complexity Low_complexity 1 21 0 1680 175 7 30 chr2 43919145 43919448 -206768406 + AluJo SINE Alu 1 296 -16 242 228 0 18 chr2 43919730 43919787 -206768067 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 228 280 30 10 chr2 43919788 43919888 -206767966 + L1MC4 LINE L1 6613 6714 -1328 213 368 17 43 chr2 43919921 43920038 -206767816 - L2 LINE L2 -32 3240 3127 200 288 30 0 chr2 43920489 43920555 -206767299 + MIR3 SINE MIR 110 177 -31 1812 162 0 22 chr2 43922826 43923140 -206764714 + AluJb SINE Alu 1 307 -5 2088 133 0 0 chr2 43923780 43924073 -206763781 - AluSx SINE Alu -19 293 1 2260 99 0 13 chr2 43924221 43924525 -206763329 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 43924543 43924567 -206763287 + AT_rich Low_complexity Low_complexity 1 24 0 693 153 0 2 chr2 43924905 43925141 -206762713 + AluJ SINE Alu 1 293 -19 225 237 0 0 chr2 43925312 43925371 -206762483 - L1MC4 LINE L1 -1339 6703 6645 * 1391 255 148 15 chr2 43925348 43925563 -206762291 - L1MC4 LINE L1 -1849 5959 5774 1558 156 3 75 chr2 43925563 43925870 -206761984 - AluJo SINE Alu -14 298 14 1391 255 148 15 chr2 43925870 43926203 -206761651 - L1MC4 LINE L1 -2034 5774 5338 376 267 11 0 chr2 43926341 43926391 -206761463 + MER58B DNA MER1_type 1 54 -2366 378 0 0 0 chr2 43926391 43926433 -206761421 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 376 267 11 0 chr2 43926433 43926472 -206761382 + MER58B DNA MER1_type 54 91 -2329 370 253 113 33 chr2 43926595 43926640 -206761214 - L1MC4 LINE L1 -1342 4804 4764 1181 185 8 48 chr2 43926640 43926754 -206761100 - MER8 DNA MER2_type 0 239 122 2246 58 41 3 chr2 43926754 43927048 -206760806 + AluYa5 SINE Alu 1 305 -6 1181 185 8 48 chr2 43927048 43927182 -206760672 - MER8 DNA MER2_type -117 122 1 370 253 113 33 chr2 43927182 43927286 -206760568 - L1MC4 LINE L1 -1382 4764 4643 1166 186 35 18 chr2 43927288 43927514 -206760340 + MER58B DNA MER1_type 79 308 -33 1233 117 0 0 chr2 43927557 43927728 -206760126 - AluSg/x SINE Alu -5 307 137 476 118 0 0 chr2 43927728 43927796 -206760058 - AluJ/FLAM SINE Alu -243 69 2 213 182 0 23 chr2 43928074 43928118 -206759736 + MIR3 SINE MIR 161 203 -5 609 269 55 24 chr2 43928673 43928892 -206758962 - MIR SINE MIR 0 262 45 2212 111 0 0 chr2 43928969 43929276 -206758578 + AluSx SINE Alu 1 307 -5 1549 131 0 105 chr2 43929343 43929489 -206758365 + AluJo SINE Alu 2 96 -218 2273 83 0 3 chr2 43929489 43929779 -206758075 + AluSx SINE Alu 1 289 -23 1549 131 0 105 chr2 43929779 43929978 -206757876 + AluJo SINE Alu 96 314 0 626 211 12 25 chr2 43929978 43930139 -206757715 + L1M4 LINE L1 5178 5336 -810 736 86 9 0 chr2 43930156 43930261 -206757593 - L1MA3 LINE L1 0 6305 6200 216 0 0 0 chr2 43930266 43930290 -206757564 + (TA)n Simple_repeat Simple_repeat 2 25 0 2079 94 49 0 chr2 43930400 43930688 -206757166 - AluSx SINE Alu -10 302 1 403 273 13 65 chr2 43930920 43930935 -206756919 - L2 LINE L2 0 3313 3299 1836 171 0 3 chr2 43930935 43931244 -206756610 - AluJb SINE Alu -4 308 1 403 273 13 65 chr2 43931244 43931382 -206756472 - L2 LINE L2 -14 3299 3168 2139 117 0 0 chr2 43931389 43931697 -206756157 + AluSx SINE Alu 1 308 -4 538 118 39 39 chr2 43931721 43931823 -206756031 - L1MC1 LINE L1 0 6333 6232 430 187 24 36 chr2 43931825 43931991 -206755863 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 746 157 0 99 chr2 43931992 43932099 -206755755 - L1MC1 LINE L1 -94 6239 6154 1784 151 7 3 chr2 43932099 43932397 -206755457 + AluJo SINE Alu 1 299 -13 746 157 0 99 chr2 43932397 43932461 -206755393 - L1MC1 LINE L1 -179 6154 6085 467 265 13 53 chr2 43932510 43932661 -206755193 - L2 LINE L2 -247 3066 2922 1539 168 6 50 chr2 43932762 43933084 -206754770 - AluJb SINE Alu -4 308 1 1389 194 30 4 chr2 43933266 43933534 -206754320 + AluJo SINE Alu 1 275 -37 1415 198 14 7 chr2 43933539 43933822 -206754032 + AluJo SINE Alu 10 294 -18 1640 106 141 4 chr2 43933824 43934121 -206753733 + AluSx SINE Alu 1 332 0 22 56 0 0 chr2 43934238 43934274 -206753580 + AT_rich Low_complexity Low_complexity 1 36 0 1723 153 0 31 chr2 43934274 43934568 -206753286 - AluJo SINE Alu -27 285 1 651 174 58 97 chr2 43934573 43934666 -206753188 - L1MC5 LINE L1 -36 7925 7830 2118 109 14 0 chr2 43934666 43934960 -206752894 + AluSx SINE Alu 1 298 -14 651 174 58 97 chr2 43934960 43935073 -206752781 - L1MC5 LINE L1 -131 7830 7727 315 187 8 194 chr2 43935362 43935434 -206752420 + MIR SINE MIR 49 86 -176 2059 113 3 0 chr2 43935434 43935725 -206752129 - AluY SINE Alu -15 296 5 315 187 8 194 chr2 43935725 43935786 -206752068 + MIR SINE MIR 86 157 -105 806 161 8 0 chr2 43936044 43936174 -206751680 + FLAM_C SINE Alu 1 131 -2 1814 125 7 24 chr2 43936300 43936596 -206751258 + AluSx SINE Alu 1 291 -21 2066 107 3 19 chr2 43936609 43936919 -206750935 + AluSq SINE Alu 1 305 -8 715 209 0 8 chr2 43936975 43937109 -206750745 - FLAM_A SINE Alu 0 133 1 1095 107 6 24 chr2 43937119 43937287 -206750567 + LTR39 LTR ERV1 1 165 -618 4024 85 5 14 chr2 43937289 43937840 -206750014 + MER41A LTR ERV1 3 548 -6 1116 103 5 33 chr2 43937840 43938024 -206749830 - AluSg/x SINE Alu 0 310 132 2133 108 7 0 chr2 43938024 43938321 -206749533 - AluSq SINE Alu -14 299 1 3438 140 32 81 chr2 43938345 43938851 -206749003 + LTR39 LTR ERV1 164 632 -151 1930 124 0 14 chr2 43938851 43939142 -206748712 - AluSx SINE Alu -25 287 1 3438 140 32 81 chr2 43939142 43939286 -206748568 + LTR39 LTR ERV1 632 782 -1 971 213 129 118 chr2 43939373 43939734 -206748120 + MER34B LTR ERV1 1 372 -193 2288 68 0 0 chr2 43939734 43940026 -206747828 + AluY SINE Alu 7 298 -13 971 213 129 118 chr2 43940026 43940223 -206747631 + MER34B LTR ERV1 372 565 0 1642 123 95 25 chr2 43940284 43940429 -206747425 - AluSx SINE Alu -7 305 172 2054 106 3 0 chr2 43940429 43940711 -206747143 - AluSx SINE Alu -20 292 10 1642 123 95 25 chr2 43940711 43940850 -206747004 - AluSx SINE Alu -140 172 1 291 87 22 0 chr2 43940884 43940930 -206746924 - L1MA10 LINE L1 -7 6327 6281 2248 100 0 0 chr2 43941126 43941427 -206746427 - AluSg SINE Alu -9 301 1 286 274 125 36 chr2 43941446 43941614 -206746240 - L2 LINE L2 -7 3306 3124 750 276 159 21 chr2 43941621 43942005 -206745849 - L2 LINE L2 -339 2975 2539 2279 71 0 14 chr2 43942557 43942854 -206745000 + AluY SINE Alu 2 294 -17 260 314 23 0 chr2 43943709 43943795 -206744059 + (CATATA)n Simple_repeat Simple_repeat 1 88 0 388 277 13 67 chr2 43943796 43943814 -206744040 - L1MC4a LINE L1 -1849 5959 5942 2243 100 3 0 chr2 43943814 43944124 -206743730 - AluSx SINE Alu -1 311 1 388 277 13 67 chr2 43944124 43944221 -206743633 - L1MC4a LINE L1 -1866 5942 5859 1801 146 30 3 chr2 43944221 43944516 -206743338 + AluJo SINE Alu 2 304 -8 388 277 13 67 chr2 43944516 43944623 -206743231 - L1MC4a LINE L1 -1949 5859 5748 261 290 247 0 chr2 43944665 43944827 -206743027 - MIR SINE MIR -59 203 2 371 287 39 44 chr2 43944835 43945016 -206742838 - L1MC4a LINE L1 -2066 5742 5563 1678 195 0 0 chr2 43945161 43945464 -206742390 - AluJb SINE Alu -9 303 1 456 110 268 0 chr2 43945467 43945549 -206742305 - L1MB7 LINE L1 -10 6174 6071 2067 106 0 20 chr2 43945558 43945860 -206741994 - AluSg SINE Alu -14 296 1 827 166 7 0 chr2 43945864 43946003 -206741851 - AluJo SINE Alu -169 143 4 544 237 89 7 chr2 43946064 43946199 -206741655 - L2 LINE L2 0 3313 3168 698 162 0 0 chr2 43946201 43946306 -206741548 + FLAM_A SINE Alu 22 126 -16 484 270 92 79 chr2 43946360 43946862 -206740992 - L2 LINE L2 -168 3145 2626 372 198 0 58 chr2 43947136 43947222 -206740632 + MER58B DNA MER1_type 3 83 -258 2095 110 10 0 chr2 43947222 43947514 -206740340 + AluSx SINE Alu 1 295 -17 488 204 28 0 chr2 43947518 43947626 -206740228 - FLAM_A SINE Alu 0 142 32 1655 129 19 4 chr2 43947626 43947889 -206739965 + MER58B DNA MER1_type 75 341 0 356 270 66 7 chr2 43947911 43948039 -206739815 + MIR SINE MIR 45 181 -27 1990 124 0 22 chr2 43948256 43948571 -206739283 - AluSx SINE Alu -1 311 4 1748 169 3 10 chr2 43948628 43948941 -206738913 - AluJo SINE Alu -1 311 1 1113 133 93 49 chr2 43949175 43949401 -206738453 + MER46A DNA MER2_type 1 236 0 1755 154 18 0 chr2 43949772 43950057 -206737797 + AluJb SINE Alu 1 290 -22 577 167 44 9 chr2 43950063 43950177 -206737677 + Charlie1 DNA MER1_type 2640 2757 -4 845 259 57 4 chr2 43950177 43950405 -206737449 + Charlie2 DNA MER1_type 74 313 -2549 1996 139 0 0 chr2 43950418 43950706 -206737148 - AluSx SINE Alu -24 288 1 1084 52 0 0 chr2 43950740 43950875 -206736979 + AluY SINE Alu 165 299 -12 315 0 0 0 chr2 43950879 43950914 -206736940 + (TG)n Simple_repeat Simple_repeat 2 36 0 226 196 0 0 chr2 43950914 43950960 -206736894 + L1MC4 LINE L1 6658 6703 -1339 1254 256 164 26 chr2 43951122 43951748 -206736106 + L1MC4a LINE L1 5352 6064 -1744 853 145 14 0 chr2 43951995 43952140 -206735714 - FRAM SINE Alu -10 166 20 2328 88 0 0 chr2 43952163 43952470 -206735384 - AluSx SINE Alu -5 307 1 728 185 0 0 chr2 43952633 43952752 -206735102 + AluJo SINE Alu 1 119 -193 584 77 13 0 chr2 43952747 43952825 -206735029 - AluSg SINE Alu -230 80 2 * 918 215 5 5 chr2 43952827 43953036 -206734818 + AluJo SINE Alu 102 310 -2 1015 85 0 0 chr2 43953913 43954043 -206733811 + AluSp SINE Alu 1 130 -183 207 0 0 0 chr2 43954043 43954066 -206733788 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 184 263 0 0 chr2 43954262 43954300 -206733554 + L2 LINE L2 3221 3258 -14 209 48 16 111 chr2 43956372 43956435 -206731419 + (CGGGA)n Simple_repeat Simple_repeat 3 59 0 196 188 62 0 chr2 43960159 43960207 -206727647 - L3b LINE CR1 0 1583 1533 180 0 0 0 chr2 43960220 43960240 -206727614 + (A)n Simple_repeat Simple_repeat 1 20 0 199 338 29 29 chr2 43960389 43960528 -206727326 + L2 LINE L2 2605 2743 -571 2014 106 6 40 chr2 43960535 43960856 -206726998 + AluSq SINE Alu 1 310 -3 2265 81 0 0 chr2 43960916 43961211 -206726643 + AluSg SINE Alu 1 295 -15 469 283 49 34 chr2 43961232 43961437 -206726417 + MIR SINE MIR 44 251 -11 3233 153 114 2 chr2 43961968 43962571 -206725283 - LTR51 LTR ERV1 0 671 1 678 172 15 22 chr2 43962649 43962783 -206725071 + L1MA9 LINE L1 6005 6137 -175 1599 68 10 0 chr2 43962783 43962989 -206724865 - AluSp SINE Alu -17 296 89 2004 114 7 0 chr2 43963284 43963585 -206724269 + AluSq SINE Alu 2 304 0 2307 81 3 0 chr2 43963585 43963895 -206723959 + AluY SINE Alu 1 311 0 25 0 0 0 chr2 43963895 43963920 -206723934 + AT_rich Low_complexity Low_complexity 1 25 0 270 106 0 0 chr2 43963966 43964013 -206723841 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 2027 138 3 0 chr2 43965779 43966083 -206721771 + AluSx SINE Alu 1 305 -7 1832 137 20 17 chr2 43966228 43966528 -206721326 - AluSx SINE Alu -11 301 1 1719 169 7 10 chr2 43966530 43966838 -206721016 - AluJo SINE Alu -5 307 1 2118 91 0 7 chr2 43966876 43967206 -206720648 - AluSx SINE Alu 0 328 1 651 209 35 0 chr2 43967208 43967323 -206720531 - FLAM_A SINE Alu -16 126 8 189 0 0 0 chr2 43967337 43967358 -206720496 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2112 101 3 0 chr2 43967361 43967647 -206720207 - AluSg SINE Alu -23 287 1 1232 67 0 18 chr2 43967656 43967867 -206719987 - AluY SINE Alu 0 328 121 1419 72 10 16 chr2 43967867 43968061 -206719793 - AluY SINE Alu -117 194 2 835 158 8 0 chr2 43968691 43968824 -206719030 + AluJo SINE Alu 2 135 -177 2085 118 0 0 chr2 43968825 43969131 -206718723 + AluSq SINE Alu 1 306 -7 2080 123 0 3 chr2 43969137 43969439 -206718415 + AluSq SINE Alu 1 301 -12 1912 113 53 10 chr2 43969442 43969742 -206718112 + AluSq SINE Alu 1 313 0 2084 100 20 3 chr2 43969751 43970052 -206717802 + AluSx SINE Alu 1 306 -6 4233 135 31 33 chr2 43970069 43970542 -206717312 + L1MC3 LINE L1 6706 7178 -607 1585 168 40 0 chr2 43970542 43970816 -206717038 + AluJo SINE Alu 1 285 -27 558 0 0 0 chr2 43970816 43970878 -206716976 + (CA)n Simple_repeat Simple_repeat 2 63 0 4233 135 31 33 chr2 43970878 43971171 -206716683 + L1MC3 LINE L1 7176 7472 -313 2096 122 0 0 chr2 43971171 43971474 -206716380 + AluSx SINE Alu 1 303 -9 628 160 76 8 chr2 43971476 43971595 -206716259 + FLAM_A SINE Alu 1 127 -6 1573 179 28 0 chr2 43971615 43971906 -206715948 + AluSq SINE Alu 1 299 -14 219 323 97 21 chr2 43972027 43972213 -206715641 + L2 LINE L2 2170 2369 -945 1768 142 54 3 chr2 43972418 43972713 -206715141 - AluJo SINE Alu -2 310 1 1931 181 133 29 chr2 43972905 43973358 -206714496 + MLT1F1 LTR MaLR 67 566 -1 2170 119 3 0 chr2 43973591 43973901 -206713953 - AluSx SINE Alu -1 311 1 1200 156 0 15 chr2 43974367 43974566 -206713288 + AluJo SINE Alu 7 202 -110 249 108 0 0 chr2 43974602 43974639 -206713215 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 1907 158 3 7 chr2 43974654 43974957 -206712897 - AluJo SINE Alu -10 302 1 255 271 105 64 chr2 43975076 43975475 -206712379 + MLT1J LTR MaLR 13 425 -21 666 165 0 0 chr2 43975479 43975793 -206712061 + AluJb SINE Alu 2 315 0 2045 97 0 75 chr2 43976152 43976471 -206711383 - AluY SINE Alu -16 295 1 1251 45 0 0 chr2 43976805 43976962 -206710892 - L1PA4 LINE L1 0 6155 5999 1789 135 7 17 chr2 43977031 43977320 -206710534 - AluSq SINE Alu 0 313 28 907 66 22 44 chr2 43977323 43977506 -206710348 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1758 173 0 10 chr2 43977506 43977807 -206710047 - AluSx SINE Alu -14 298 1 775 165 0 15 chr2 43978076 43978209 -206709645 - FLAM_A SINE Alu 0 133 3 320 241 25 86 chr2 43978467 43978541 -206709313 - L2 LINE L2 -1 3312 3252 2640 129 20 67 chr2 43978541 43978621 -206709233 + MER101 LTR ERV1 2 84 -390 2363 109 0 0 chr2 43978621 43978925 -206708929 + AluSc SINE Alu 1 304 -5 2640 129 20 67 chr2 43978925 43979340 -206708514 + MER101 LTR ERV1 84 474 0 320 241 25 86 chr2 43979340 43979427 -206708427 - L2 LINE L2 -61 3252 3161 296 67 0 44 chr2 43979440 43979485 -206708369 + L1MC3 LINE L1 7409 7451 -334 31 0 0 0 chr2 43979491 43979522 -206708332 + AT_rich Low_complexity Low_complexity 1 31 0 569 277 8 0 chr2 43979559 43979689 -206708165 + FLAM_A SINE Alu 3 133 0 2188 115 0 13 chr2 43979767 43980072 -206707782 - AluY SINE Alu -10 301 1 2245 100 3 0 chr2 43980075 43980365 -206707489 - AluSx SINE Alu -19 293 3 400 268 27 18 chr2 43980435 43980547 -206707307 + MIR SINE MIR 20 132 -130 2045 155 69 3 chr2 43980582 43980957 -206706897 - MER57A LTR ERV1 0 403 4 2320 69 14 0 chr2 43981753 43982044 -206705810 + AluSq SINE Alu 1 295 -18 1459 85 16 0 chr2 43982060 43982248 -206705606 + AluY SINE Alu 6 196 -115 198 0 0 0 chr2 43982661 43982683 -206705171 + (TA)n Simple_repeat Simple_repeat 2 23 0 523 174 0 43 chr2 43982683 43982775 -206705079 - FRAM SINE Alu -15 161 74 6451 107 8 28 chr2 43982776 43983209 -206704645 - L1MA2 LINE L1 -113 6191 5751 234 0 0 0 chr2 43983209 43983235 -206704619 + (TG)n Simple_repeat Simple_repeat 2 27 0 2073 127 3 0 chr2 43983235 43983519 -206704335 - AluSx SINE Alu -27 285 1 6451 107 8 28 chr2 43983519 43984404 -206703450 - L1MA2 LINE L1 -551 5753 4892 3491 170 89 36 chr2 43984403 43984867 -206702987 + L1MB2 LINE L1 5323 5848 -323 * 2264 103 23 0 chr2 43984867 43985169 -206702685 + AluSx SINE Alu 1 309 -3 3491 170 89 36 chr2 43985169 43985504 -206702350 + L1MB2 LINE L1 5848 6164 -7 283 288 0 0 chr2 43985523 43985582 -206702272 - tRNA-Leu-CTT tRNA tRNA -5 80 22 554 148 222 9 chr2 43985595 43985703 -206702151 - FLAM_C SINE Alu -11 132 2 1393 184 22 65 chr2 43985916 43986237 -206701617 + AluJo SINE Alu 1 307 -5 233 223 20 54 chr2 43986335 43986483 -206701371 + (TATAA)n Simple_repeat Simple_repeat 3 145 0 1567 165 55 24 chr2 43986677 43986968 -206700886 + AluJb SINE Alu 1 300 -12 481 237 40 50 chr2 43987479 43987640 -206700214 - MIR SINE MIR 0 262 102 1611 184 10 33 chr2 43987640 43987945 -206699909 + AluJb SINE Alu 1 298 -14 481 237 40 50 chr2 43987945 43987981 -206699873 - MIR SINE MIR -160 102 67 465 98 0 0 chr2 43988003 43988064 -206699790 + Alu SINE Alu 2 62 -250 378 0 0 0 chr2 43988065 43988107 -206699747 + (CA)n Simple_repeat Simple_repeat 1 42 0 1006 156 12 0 chr2 43988109 43988269 -206699585 + FRAM SINE Alu 1 162 -14 613 198 9 18 chr2 43988277 43988388 -206699466 + FLAM_A SINE Alu 1 110 -32 2148 85 3 11 chr2 43989370 43989652 -206698202 + AluSq SINE Alu 19 298 -15 449 182 8 83 chr2 43990110 43990132 -206697722 + L1MD3 LINE L1 7871 7893 -102 2438 84 0 0 chr2 43990132 43990431 -206697423 + AluY SINE Alu 1 299 -12 449 182 8 83 chr2 43990431 43990519 -206697335 + L1MD3 LINE L1 7893 7974 -21 1470 183 52 4 chr2 43990519 43990787 -206697067 + AluJo SINE Alu 1 281 -31 26 64 0 0 chr2 43990805 43990852 -206697002 + AT_rich Low_complexity Low_complexity 1 47 0 2400 103 0 0 chr2 43991317 43991628 -206696226 + AluY SINE Alu 1 311 0 2030 117 58 0 chr2 43992854 43993145 -206694709 + AluSx SINE Alu 1 308 -4 603 148 0 10 chr2 43994703 43994804 -206693050 - AluJ/FLAM SINE Alu -211 101 2 1178 217 52 72 chr2 43995544 43995643 -206692211 + L1ME LINE L1 4958 5057 -1107 2204 135 0 0 chr2 43995643 43995954 -206691900 - AluJb SINE Alu -1 311 1 1178 217 52 72 chr2 43995954 43996432 -206691422 + L1ME LINE L1 5057 5531 -633 1683 144 65 82 chr2 43996432 43996561 -206691293 + MER7A DNA MER2_type 1 131 -2907 2217 123 0 7 chr2 43996561 43996870 -206690984 + AluSx SINE Alu 1 307 -5 1683 144 65 82 chr2 43996870 43997094 -206690760 + MER7A DNA MER2_type 131 346 0 1178 217 52 72 chr2 43997094 43997121 -206690733 + L1ME LINE L1 5531 5557 -607 374 162 0 15 chr2 43997121 43997189 -206690665 - MADE1 DNA Mariner -1 79 13 2488 70 0 0 chr2 43997191 43997490 -206690364 - AluSx SINE Alu -13 299 1 567 287 45 73 chr2 43997503 43997823 -206690031 + L1ME LINE L1 3329 3656 -2490 2357 104 0 0 chr2 43997823 43998121 -206689733 + AluSx SINE Alu 1 298 -14 1881 157 3 7 chr2 43998131 43998424 -206689430 + AluJb SINE Alu 7 298 -14 567 287 45 73 chr2 43998424 43998555 -206689299 + L1ME LINE L1 3665 3778 -2368 324 291 164 0 chr2 43998564 43998698 -206689156 + L1ME LINE L1 4077 4232 -1914 285 274 0 0 chr2 43998744 43998817 -206689037 - Tigger5 DNA MER2_type 0 2323 2251 283 208 0 0 chr2 43998787 43998840 -206689014 - Tigger5 DNA MER2_type -2269 54 2 * 335 261 72 80 chr2 43998854 43999110 -206688744 + L1ME LINE L1 4303 4559 -1587 2319 104 0 7 chr2 43999110 43999419 -206688435 + AluSg1 SINE Alu 1 307 -2 335 261 72 80 chr2 43999419 43999574 -206688280 + L1ME LINE L1 4559 4714 -1432 2246 107 0 0 chr2 43999574 43999872 -206687982 + AluSg SINE Alu 1 298 -12 335 261 72 80 chr2 43999872 44000234 -206687620 + L1ME LINE L1 4714 5174 -972 24 32 0 0 chr2 44000724 44000755 -206687099 + AT_rich Low_complexity Low_complexity 1 31 0 502 223 89 0 chr2 44000827 44000939 -206686915 + FLAM_C SINE Alu 1 122 -21 21 0 0 0 chr2 44000939 44000960 -206686894 + AT_rich Low_complexity Low_complexity 1 21 0 1695 152 70 4 chr2 44001036 44001306 -206686548 + AluJo SINE Alu 7 294 -18 1688 160 32 7 chr2 44001312 44001593 -206686261 + AluJo SINE Alu 1 288 -24 270 0 0 0 chr2 44001593 44001623 -206686231 + (TG)n Simple_repeat Simple_repeat 2 31 0 2253 166 111 2 chr2 44001631 44002100 -206685754 + L1MB7 LINE L1 5665 6184 0 243 160 93 40 chr2 44002096 44002171 -206685683 + L1ME LINE L1 5814 5892 -272 * 1027 181 0 11 chr2 44002175 44002352 -206685502 + AluJb SINE Alu 137 311 -1 632 328 48 0 chr2 44002369 44002671 -206685183 + L1ME LINE L1 5447 5777 -385 1863 138 4 4 chr2 44002941 44003217 -206684637 - AluSx SINE Alu -16 296 21 386 169 8 0 chr2 44003223 44003341 -206684513 + (TA)n Simple_repeat Simple_repeat 2 120 0 2460 62 17 0 chr2 44003341 44003633 -206684221 - AluY SINE Alu -14 297 1 2226 114 7 0 chr2 44003781 44004087 -206683767 - AluSx SINE Alu -4 308 1 1941 91 0 0 chr2 44004307 44004549 -206683305 + AluSx SINE Alu 1 242 -70 2329 98 3 0 chr2 44004683 44004979 -206682875 + AluSx SINE Alu 1 297 -15 322 186 179 21 chr2 44004999 44005144 -206682710 - Charlie2 DNA MER1_type -202 2660 2493 218 216 186 82 chr2 44005398 44005495 -206682359 + L2 LINE L2 3161 3267 -5 304 162 114 48 chr2 44005520 44005625 -206682229 - Charlie2 DNA MER1_type -351 2511 2400 822 154 8 0 chr2 44005638 44005761 -206682093 + FRAM SINE Alu 23 146 -30 1046 91 0 21 chr2 44005761 44005904 -206681950 - AluSg/x SINE Alu -10 302 163 2059 147 0 0 chr2 44006011 44006304 -206681550 - AluSx SINE Alu -19 293 1 401 250 83 15 chr2 44006348 44006480 -206681374 + MLT1A1 LTR MaLR 225 365 0 2336 108 0 0 chr2 44006620 44006925 -206680929 - AluSg SINE Alu -5 305 1 2480 78 0 0 chr2 44006935 44007230 -206680624 - AluY SINE Alu -16 295 1 1987 155 3 0 chr2 44007403 44007706 -206680148 + AluSx SINE Alu 1 304 -8 2207 78 36 39 chr2 44008255 44008563 -206679291 - AluSq SINE Alu -6 307 1 251 73 49 0 chr2 44008663 44008704 -206679150 + T-rich Low_complexity Low_complexity 2 44 0 305 117 0 100 chr2 44008704 44008726 -206679128 - MER41B LTR ERV1 -101 534 511 2489 68 3 0 chr2 44008726 44009034 -206678820 + AluY SINE Alu 1 309 -2 305 117 0 100 chr2 44009034 44009071 -206678783 - MER41B LTR ERV1 -124 511 481 238 233 27 0 chr2 44009072 44009145 -206678709 + Charlie5 DNA MER1_type 2491 2565 -47 2147 105 26 3 chr2 44009489 44009794 -206678060 + AluSq SINE Alu 1 312 -1 252 186 0 0 chr2 44009809 44009868 -206677986 - MLT1J LTR MaLR -37 474 416 364 189 0 27 chr2 44009878 44009952 -206677902 + MLT1J LTR MaLR 426 497 -14 783 158 8 0 chr2 44009970 44010097 -206677757 - FLAM_C SINE Alu -5 128 1 283 228 109 20 chr2 44010104 44010205 -206677649 + MLT1J LTR MaLR 278 387 -124 2394 79 7 0 chr2 44010279 44010569 -206677285 + AluSx SINE Alu 1 292 -20 514 167 250 0 chr2 44010593 44010701 -206677153 - AluJb SINE Alu -177 135 1 624 249 50 13 chr2 44010706 44010905 -206676949 - MLT1J LTR MaLR -292 219 18 1810 169 7 3 chr2 44011011 44011307 -206676547 + AluJo SINE Alu 1 297 -15 2355 112 0 3 chr2 44011366 44011679 -206676175 + AluSp SINE Alu 1 312 -1 2580 60 0 0 chr2 44011752 44012052 -206675802 + AluY SINE Alu 1 300 -11 942 274 43 87 chr2 44012341 44012456 -206675398 + L1MC4 LINE L1 7449 7567 -475 2349 109 0 3 chr2 44012456 44012769 -206675085 + AluSq SINE Alu 1 312 -1 942 274 43 87 chr2 44012769 44013125 -206674729 + L1MC4 LINE L1 7567 7889 -153 2384 83 0 3 chr2 44013125 44013426 -206674428 + AluY SINE Alu 1 300 -11 942 274 43 87 chr2 44013426 44013574 -206674280 + L1MC4 LINE L1 7889 8042 0 2217 121 0 9 chr2 44013600 44013915 -206673939 + AluSx SINE Alu 1 312 0 2733 29 6 0 chr2 44013933 44014246 -206673608 - AluYb8 SINE Alu -3 315 1 2523 91 27 19 chr2 44014368 44014740 -206673114 - THE1C LTR MaLR 0 375 1 1904 143 34 3 chr2 44014750 44015043 -206672811 - AluJo SINE Alu -8 304 3 1881 148 10 7 chr2 44015343 44015633 -206672221 - AluJo SINE Alu -10 302 12 2093 142 0 10 chr2 44015725 44016034 -206671820 + AluJo SINE Alu 1 306 -6 1739 153 60 131 chr2 44016110 44016205 -206671649 + MER47B DNA MER2_type 1 101 -2222 2433 74 7 0 chr2 44016205 44016503 -206671351 - AluSp SINE Alu -13 300 1 1739 153 60 131 chr2 44016503 44016857 -206670997 + MER47B DNA MER2_type 101 418 0 378 80 0 0 chr2 44017573 44017623 -206670231 - MLT2A1 LTR ERVL 0 444 395 605 169 77 87 chr2 44017624 44018128 -206669726 - Ricksha DNA DNA -1668 378 186 930 72 12 90 chr2 44017658 44017718 -206670136 - HERVL LTR ERVL -1 5653 5590 2023 128 0 17 chr2 44017718 44018029 -206669825 - AluSx SINE Alu 0 306 1 930 72 12 90 chr2 44018029 44018134 -206669720 - HERVL LTR ERVL -64 5590 5500 1392 147 5 5 chr2 44018135 44018353 -206669501 - LTR26E LTR ERV1 -129 493 276 2329 95 0 0 chr2 44018353 44018648 -206669206 - AluSg SINE Alu -15 295 1 1424 174 46 49 chr2 44018653 44018958 -206668896 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 44019002 44019023 -206668831 + AT_rich Low_complexity Low_complexity 1 21 0 459 148 0 34 chr2 44019023 44019111 -206668743 - FLAM_A SINE Alu -6 136 52 1355 145 14 82 chr2 44019111 44019338 -206668516 + MER41D LTR ERV1 3 209 -348 2272 114 0 19 chr2 44019338 44019654 -206668200 + AluSg SINE Alu 1 310 0 1355 145 14 82 chr2 44019654 44019708 -206668146 + MER41D LTR ERV1 209 265 -292 703 128 14 108 chr2 44019710 44019858 -206667996 - FLAM_C SINE Alu -8 135 2 1389 99 10 15 chr2 44019894 44020096 -206667758 - LTR26B LTR ERV1 -330 201 1 2152 139 0 7 chr2 44020270 44020579 -206667275 + AluJb SINE Alu 3 309 -3 212 245 277 0 chr2 44020762 44020856 -206666998 + MIR SINE MIR 125 244 -18 335 235 24 12 chr2 44022239 44022324 -206665530 - MER5A DNA MER1_type -37 152 67 2062 110 80 28 chr2 44022347 44022513 -206665341 - MER57B LTR ERV1 -51 383 227 2128 101 0 10 chr2 44022513 44022801 -206665053 - AluSx SINE Alu -25 287 3 2062 110 80 28 chr2 44022801 44022997 -206664857 - MER57B LTR ERV1 -207 227 2 1076 115 0 0 chr2 44023028 44023176 -206664678 - MER57B LTR ERV1 -284 150 3 336 219 123 0 chr2 44023282 44023355 -206664499 + MER44D DNA MER2_type 1 82 -623 1954 139 0 3 chr2 44023355 44023642 -206664212 + AluSx SINE Alu 1 286 -26 1857 143 0 36 chr2 44023682 44023983 -206663871 + AluJb SINE Alu 1 290 -22 578 0 49 0 chr2 44023983 44024065 -206663789 + (TA)n Simple_repeat Simple_repeat 2 87 0 2259 85 7 0 chr2 44024068 44024350 -206663504 + AluSp SINE Alu 4 287 -26 696 87 78 6 chr2 44024350 44024886 -206662968 + (TA)n Simple_repeat Simple_repeat 1 574 0 21 0 0 0 chr2 44024886 44024907 -206662947 + AT_rich Low_complexity Low_complexity 1 21 0 4001 143 16 51 chr2 44024909 44025595 -206662259 + MER44D DNA MER2_type 72 605 0 2038 105 3 31 chr2 44025932 44026218 -206661636 + AluSx SINE Alu 1 278 -34 369 0 0 0 chr2 44026220 44026261 -206661593 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1994 144 0 0 chr2 44026351 44026657 -206661197 - AluSx SINE Alu 0 312 7 665 275 100 32 chr2 44026663 44026914 -206660940 - L2 LINE L2 -18 3295 3028 2091 74 42 3 chr2 44026914 44027198 -206660656 - AluSc SINE Alu -14 295 1 633 135 10 0 chr2 44027200 44027296 -206660558 - AluJo/FLAM SINE Alu -181 131 35 368 188 125 62 chr2 44027340 44027468 -206660386 - L2 LINE L2 -361 2952 2817 657 216 12 36 chr2 44027648 44027815 -206660039 + FRAM SINE Alu 4 166 0 2167 96 0 16 chr2 44027842 44028155 -206659699 + AluSc SINE Alu 1 308 -1 1284 181 39 62 chr2 44028167 44028316 -206659538 + AluJo SINE Alu 1 152 -203 2334 58 3 0 chr2 44028316 44028611 -206659243 + AluY SINE Alu 1 296 -15 1284 181 39 62 chr2 44028611 44028626 -206659228 + AluJo SINE Alu 152 166 -189 2243 88 3 0 chr2 44028626 44028920 -206658934 + AluSp SINE Alu 1 295 -18 1284 181 39 62 chr2 44028920 44029116 -206658738 + AluJo SINE Alu 166 355 0 2130 116 0 0 chr2 44029127 44029428 -206658426 + AluSx SINE Alu 4 304 -8 1505 121 0 13 chr2 44030078 44030310 -206657544 + AluSq SINE Alu 38 266 -47 2224 81 30 0 chr2 44030354 44030650 -206657204 + AluSp SINE Alu 1 305 -8 2198 90 0 26 chr2 44030651 44030962 -206656892 + AluY SINE Alu 1 303 -8 2108 107 0 0 chr2 44030962 44031288 -206656566 + AluSx SINE Alu 1 326 0 884 98 0 0 chr2 44032270 44032393 -206655461 + AluSg/x SINE Alu 138 260 -52 478 75 0 85 chr2 44032395 44032489 -206655365 + Alu SINE Alu 224 309 0 854 268 38 55 chr2 44033252 44033369 -206654485 + L2 LINE L2 1996 2114 -1200 361 206 123 112 chr2 44033369 44033411 -206654443 + MER5B DNA MER1_type 4 44 -134 2035 100 10 35 chr2 44033411 44033722 -206654132 - AluSp SINE Alu -10 303 1 1773 115 27 24 chr2 44033732 44034027 -206653827 - AluSx SINE Alu -16 296 1 361 206 123 112 chr2 44034027 44034143 -206653711 + MER5B DNA MER1_type 52 175 -3 854 268 38 55 chr2 44034143 44034368 -206653486 + L2 LINE L2 2114 2332 -982 2235 100 0 0 chr2 44034392 44034692 -206653162 + AluSx SINE Alu 1 300 -12 335 320 112 34 chr2 44034705 44034769 -206653085 + L2 LINE L2 2480 2538 -776 2069 79 9 70 chr2 44034769 44035085 -206652769 + AluSp SINE Alu 1 297 -16 335 320 112 34 chr2 44035085 44035226 -206652628 + L2 LINE L2 2538 2701 -613 27 0 0 0 chr2 44035226 44035253 -206652601 + AT_rich Low_complexity Low_complexity 1 27 0 1346 103 61 5 chr2 44035269 44035482 -206652372 - AluSx SINE Alu -87 225 1 1327 108 5 0 chr2 44035634 44035820 -206652034 + AluSg/x SINE Alu 112 298 -12 242 262 0 16 chr2 44035833 44035894 -206651960 + L2 LINE L2 2480 2539 -775 644 106 0 4 chr2 44035898 44036134 -206651720 + AluSx SINE Alu 2 323 0 1986 119 0 7 chr2 44036166 44036461 -206651393 + AluSx SINE Alu 6 298 -14 500 316 140 7 chr2 44036477 44036779 -206651075 + L2 LINE L2 2722 3059 -254 2341 90 0 0 chr2 44036851 44037161 -206650693 - AluSx SINE Alu -2 310 1 1443 205 115 41 chr2 44037424 44037859 -206649995 - MLT1C LTR MaLR 0 467 1 327 285 157 48 chr2 44038309 44038769 -206649085 + L2 LINE L2 2243 2752 -562 1518 109 38 0 chr2 44038782 44038993 -206648861 - AluSx SINE Alu -87 225 7 2098 113 3 0 chr2 44039003 44039304 -206648550 - AluY SINE Alu -9 302 1 537 16 0 0 chr2 44039315 44039377 -206648477 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 2029 86 14 4 chr2 44039381 44039659 -206648195 - AluSq SINE Alu -32 281 1 2151 102 0 3 chr2 44040321 44040614 -206647240 - AluSg SINE Alu -18 292 1 1386 167 92 27 chr2 44040713 44041006 -206646848 - AluJb SINE Alu 0 312 1 395 275 92 44 chr2 44041203 44041261 -206646593 - MIR SINE MIR -8 254 200 2037 108 3 17 chr2 44041261 44041556 -206646298 + AluSq SINE Alu 1 291 -22 395 275 92 44 chr2 44041556 44041726 -206646128 - MIR SINE MIR -62 200 15 199 271 76 76 chr2 44042377 44042495 -206645359 + MIR SINE MIR 8 125 -137 294 236 104 19 chr2 44042739 44042845 -206645009 - MIR SINE MIR -50 212 98 23 0 0 0 chr2 44042854 44042877 -206644977 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr2 44044228 44044276 -206643578 + GC_rich Low_complexity Low_complexity 1 48 0 204 40 0 0 chr2 44044717 44044742 -206643112 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 29 0 0 0 chr2 44046050 44046079 -206641775 + AT_rich Low_complexity Low_complexity 1 29 0 684 155 9 0 chr2 44046106 44046222 -206641632 + FLAM_C SINE Alu 1 117 -16 28 29 0 0 chr2 44046222 44046257 -206641597 + AT_rich Low_complexity Low_complexity 1 35 0 2258 87 6 6 chr2 44046257 44046569 -206641285 + AluSp SINE Alu 1 312 -1 1961 103 40 20 chr2 44046639 44046939 -206640915 + AluSx SINE Alu 1 306 -6 2304 81 3 0 chr2 44047194 44047491 -206640363 + AluSp SINE Alu 1 298 -15 2199 76 7 7 chr2 44047524 44047815 -206640039 + AluY SINE Alu 1 291 -20 1519 170 54 0 chr2 44047838 44048114 -206639740 + AluJb SINE Alu 9 299 -13 2025 135 0 3 chr2 44048244 44048556 -206639298 - AluSq SINE Alu -2 311 1 931 167 0 7 chr2 44048892 44049042 -206638812 - AluJo/FRAM SINE Alu -30 282 134 2079 112 3 0 chr2 44049042 44049337 -206638517 - AluSx SINE Alu -15 297 2 213 39 0 0 chr2 44049339 44049365 -206638489 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 1982 68 60 0 chr2 44049365 44049511 -206638343 - AluY SINE Alu -30 281 145 275 0 29 0 chr2 44049511 44049546 -206638308 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1982 68 60 0 chr2 44049546 44049664 -206638190 - AluY SINE Alu -166 145 1 2081 96 31 0 chr2 44049664 44049954 -206637900 - AluSp SINE Alu -13 300 1 1667 109 51 12 chr2 44049998 44050254 -206637600 - AluSq SINE Alu -47 266 1 659 168 26 0 chr2 44050254 44050367 -206637487 - AluJo SINE Alu -176 136 21 197 260 8 110 chr2 44050580 44050707 -206637147 + L2 LINE L2 2791 2904 -410 590 215 103 51 chr2 44050736 44050950 -206636904 + L2 LINE L2 3089 3313 0 250 281 34 11 chr2 44051012 44051101 -206636753 - L2 LINE L2 0 3313 3223 634 327 27 64 chr2 44051593 44051923 -206635931 - L2 LINE L2 -4 3268 2951 1167 203 6 84 chr2 44052014 44052147 -206635707 + AluJo SINE Alu 4 146 -156 2039 118 20 0 chr2 44052147 44052452 -206635402 + AluSx SINE Alu 1 311 -1 1167 203 6 84 chr2 44052452 44052634 -206635220 + AluJo SINE Alu 142 295 -3 261 0 0 0 chr2 44052634 44052663 -206635191 + (TA)n Simple_repeat Simple_repeat 2 30 0 280 250 102 23 chr2 44052685 44052773 -206635081 - MER5C DNA MER1_type -225 99 5 2212 98 0 0 chr2 44053012 44053307 -206634547 - AluSg SINE Alu -15 295 1 210 192 0 0 chr2 44054906 44054958 -206632896 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 851 193 6 0 chr2 44054958 44055119 -206632735 - AluJo SINE Alu -14 298 137 742 146 15 31 chr2 44055248 44055378 -206632476 - AluJo SINE Alu -174 128 1 1400 162 0 126 chr2 44055475 44055809 -206632045 - AluJb SINE Alu -10 292 1 288 154 0 0 chr2 44055812 44055864 -206631990 - L1PA11 LINE L1 -6 6168 6117 305 57 0 38 chr2 44055864 44055917 -206631937 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1864 116 0 0 chr2 44055917 44056176 -206631678 - AluSg SINE Alu -29 281 23 1702 115 29 0 chr2 44056176 44056417 -206631437 - AluSx SINE Alu -62 250 1 407 167 167 0 chr2 44056800 44056878 -206630976 - AluJ/FLAM SINE Alu -219 93 3 1622 167 0 41 chr2 44056889 44057207 -206630647 - AluJo SINE Alu -3 309 5 1956 104 59 0 chr2 44057288 44057577 -206630277 - AluSp SINE Alu -6 307 2 2333 60 0 3 chr2 44057588 44057886 -206629968 - AluY SINE Alu -14 297 1 668 178 0 39 chr2 44058035 44058164 -206629690 + FLAM_C SINE Alu 2 125 -18 273 259 104 44 chr2 44058440 44058575 -206629279 + MIR SINE MIR 25 167 -95 1842 139 17 7 chr2 44059069 44059363 -206628491 - AluSx SINE Alu -15 297 1 2009 108 7 7 chr2 44059374 44059670 -206628184 - AluSp SINE Alu -13 300 5 396 268 93 29 chr2 44059698 44059903 -206627951 - L1MC5 LINE L1 -36 7925 7708 541 185 57 38 chr2 44059912 44060069 -206627785 - L1MC4 LINE L1 -17 8025 7866 246 103 0 0 chr2 44060078 44060117 -206627737 - Alu SINE Alu -7 293 255 1270 159 0 66 chr2 44060142 44060413 -206627441 + AluJo SINE Alu 30 282 -30 1017 101 0 0 chr2 44060468 44060606 -206627248 - AluSg/x SINE Alu -16 296 159 2192 66 11 3 chr2 44060632 44060919 -206626935 - AluSp SINE Alu -24 289 1 1958 121 10 0 chr2 44061000 44061289 -206626565 - AluSx SINE Alu -4 308 17 599 225 0 29 chr2 44061347 44061485 -206626369 + FRAM SINE Alu 26 159 -17 1818 152 34 0 chr2 44061532 44061829 -206626025 + AluSq SINE Alu 1 307 -6 771 150 8 0 chr2 44061833 44061953 -206625901 + FLAM_C SINE Alu 1 121 -12 703 108 7 7 chr2 44062006 44062145 -206625709 + (CA)n Simple_repeat Simple_repeat 2 140 0 1536 150 55 46 chr2 44062150 44062271 -206625583 + AluSx SINE Alu 1 119 -193 2270 92 0 0 chr2 44062271 44062564 -206625290 + AluSc SINE Alu 1 293 -16 1536 150 55 46 chr2 44062564 44062749 -206625105 + AluSx SINE Alu 119 310 -2 531 138 92 0 chr2 44062759 44062846 -206625008 + AluJb SINE Alu 194 288 -24 1543 164 7 21 chr2 44063125 44063412 -206624442 - AluSx SINE Alu -11 301 19 1191 199 78 152 chr2 44063423 44064219 -206623635 - Charlie2a DNA MER1_type -348 2514 1778 247 219 12 12 chr2 44064274 44064356 -206623498 + (TA)n Simple_repeat Simple_repeat 1 82 0 1237 183 155 34 chr2 44064363 44064686 -206623168 - MLT2C1 LTR ERVL -33 364 3 281 149 30 45 chr2 44064688 44064755 -206623099 - Charlie2a DNA MER1_type -1087 1775 1710 21 0 0 0 chr2 44064846 44064867 -206622987 + AT_rich Low_complexity Low_complexity 1 21 0 718 212 25 30 chr2 44064870 44065068 -206622786 - Charlie2a DNA MER1_type -1206 1656 1460 1370 134 5 0 chr2 44065086 44065295 -206622559 - AluSg/x SINE Alu -17 293 84 617 210 164 96 chr2 44065295 44065648 -206622206 - Charlie2a DNA MER1_type -2377 405 29 2248 149 53 19 chr2 44065698 44066114 -206621740 + MSTB1 LTR MaLR 1 430 -2 1698 124 0 16 chr2 44066142 44066400 -206621454 - AluSx SINE Alu -9 303 50 3701 128 42 6 chr2 44066541 44067168 -206620686 - Tigger3(Golem) DNA MER2_type -1 3028 2380 2094 111 10 0 chr2 44067168 44067474 -206620380 - AluSg SINE Alu -1 309 1 242 274 32 21 chr2 44067613 44067708 -206620146 + L1M4 LINE L1 4822 4917 -1229 1354 234 97 35 chr2 44067723 44068154 -206619700 + LTR32 LTR ERVL 14 471 0 296 204 111 76 chr2 44068188 44068329 -206619525 - L1MC5 LINE L1 -465 7496 7346 1767 89 32 76 chr2 44068329 44068644 -206619210 - AluSx SINE Alu -11 301 1 296 204 111 76 chr2 44068644 44068674 -206619180 - L1MC5 LINE L1 -615 7346 7319 2020 114 9 22 chr2 44068876 44069257 -206618597 - AluSq SINE Alu 0 377 1 346 183 98 0 chr2 44069291 44069373 -206618481 - MER20B DNA MER1_type 0 783 694 493 296 41 27 chr2 44069385 44069605 -206618249 - HAL1 LINE L1 -889 1618 1396 2329 83 0 10 chr2 44070147 44070460 -206617394 - AluSg SINE Alu 0 310 1 213 108 0 0 chr2 44070494 44070531 -206617323 + (CA)n Simple_repeat Simple_repeat 2 38 0 1195 205 4 15 chr2 44070744 44071007 -206616847 + AluJo SINE Alu 37 296 -16 186 43 0 0 chr2 44071013 44071036 -206616818 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 422 222 100 0 chr2 44071037 44071127 -206616727 - FLAM_A SINE Alu -26 116 18 1702 151 0 4 chr2 44071416 44071681 -206616173 - AluJo SINE Alu -36 276 13 1813 136 10 14 chr2 44071757 44072072 -206615782 + AluSx SINE Alu 1 312 0 1368 101 58 19 chr2 44072386 44072644 -206615210 - SVA Other Other -1116 270 3 1366 150 135 0 chr2 44072904 44073170 -206614684 - AluJo SINE Alu -10 302 1 1836 103 0 0 chr2 44073241 44073484 -206614370 + AluSx SINE Alu 47 289 -23 1824 151 3 3 chr2 44074127 44074419 -206613435 + AluSx SINE Alu 1 292 -20 1958 131 3 3 chr2 44074558 44074856 -206612998 - AluSx SINE Alu -13 299 2 373 205 0 0 chr2 44075247 44075325 -206612529 - MER103 DNA DNA -51 115 38 1955 131 7 10 chr2 44075342 44075648 -206612206 + AluSx SINE Alu 1 305 -7 244 232 58 29 chr2 44075952 44076021 -206611833 + LTR8A LTR ERV1 593 663 -64 906 158 23 11 chr2 44076121 44076298 -206611556 - AluSc SINE Alu -130 179 1 927 251 19 19 chr2 44076299 44076562 -206611292 - L1MEc LINE L1 -5633 763 501 678 234 0 0 chr2 44076654 44076778 -206611076 - FLAM_A SINE Alu -6 127 4 1554 158 0 82 chr2 44076784 44076955 -206610899 - AluSx SINE Alu -22 290 155 1926 132 0 4 chr2 44076955 44077227 -206610627 - AluSx SINE Alu -33 279 9 1554 158 0 82 chr2 44077227 44077371 -206610483 - AluSx SINE Alu -157 155 1 1161 205 56 46 chr2 44077381 44077684 -206610170 - L1ME LINE L1 -401 5763 5458 309 263 12 12 chr2 44077722 44077802 -206610052 + MER81 DNA DNA 1 80 -34 22 35 0 0 chr2 44078191 44078220 -206609634 + AT_rich Low_complexity Low_complexity 1 29 0 2053 103 30 0 chr2 44078840 44079141 -206608713 - AluY SINE Alu -1 310 1 2292 96 0 3 chr2 44079142 44079434 -206608420 - AluSq SINE Alu -21 292 2 3594 35 0 23 chr2 44079669 44080098 -206607756 - SVA Other Other 0 1386 968 192 348 51 51 chr2 44080565 44080683 -206607171 - MIR SINE MIR -137 125 8 321 283 73 51 chr2 44081334 44081504 -206606350 + MIR SINE MIR 15 191 -71 2080 112 3 20 chr2 44081504 44081800 -206606054 - AluSq SINE Alu -22 291 1 2182 104 30 0 chr2 44081882 44082181 -206605673 - AluY SINE Alu -3 308 1 208 268 14 14 chr2 44082271 44082342 -206605512 - MIR3 SINE MIR -9 199 129 2073 75 27 30 chr2 44083125 44083420 -206604434 + AluY SINE Alu 3 296 -15 2326 97 0 7 chr2 44083730 44084039 -206603815 + AluY SINE Alu 1 307 -4 931 159 0 12 chr2 44084255 44084418 -206603436 + AluJb SINE Alu 129 289 -23 1791 132 15 7 chr2 44084422 44084695 -206603159 - Tigger3b DNA MER2_type -661 570 296 2136 112 0 7 chr2 44084695 44084991 -206602863 + AluSx SINE Alu 1 294 -18 835 230 17 17 chr2 44085012 44085190 -206602664 + AluJb SINE Alu 118 295 -17 1484 189 39 4 chr2 44085190 44085470 -206602384 - Tigger3b DNA MER2_type -940 291 2 488 164 48 39 chr2 44085548 44085652 -206602202 + FAM SINE Alu 65 169 -16 331 277 62 18 chr2 44085653 44085765 -206602089 - L1MC/D LINE L1 -2195 5613 5497 2038 120 41 0 chr2 44085778 44086069 -206601785 - AluSx SINE Alu -9 303 1 2066 119 38 3 chr2 44086071 44086364 -206601490 - AluSx SINE Alu -9 303 1 2207 97 0 13 chr2 44086418 44086717 -206601137 - AluSg SINE Alu -15 295 1 2052 137 0 16 chr2 44086856 44087162 -206600692 - AluSx SINE Alu -11 301 1 1503 164 31 17 chr2 44087187 44087480 -206600374 - AluJo SINE Alu -1 311 15 2011 123 7 7 chr2 44088034 44088335 -206599519 - AluSx SINE Alu -11 301 1 2076 109 24 3 chr2 44088933 44089226 -206598628 + AluSq SINE Alu 1 299 -14 479 153 0 12 chr2 44089252 44089337 -206598517 - L1MC4 LINE L1 -37 8005 7922 1072 135 107 10 chr2 44089342 44089691 -206598163 - LTR54 LTR ERV1 0 510 8 180 0 0 0 chr2 44089695 44089715 -206598139 + (TA)n Simple_repeat Simple_repeat 1 20 0 1590 220 8 38 chr2 44089716 44090111 -206597743 - L1MC4 LINE L1 -147 7895 7513 452 263 161 41 chr2 44090149 44090658 -206597196 - L1M4 LINE L1 -2702 3444 2875 724 168 0 77 chr2 44091165 44091308 -206596546 + FLAM_A SINE Alu 1 132 -1 2190 121 6 10 chr2 44091310 44091623 -206596231 + AluSx SINE Alu 1 312 0 985 171 17 11 chr2 44091795 44091976 -206595878 - AluSg/x SINE Alu -12 300 119 1069 173 0 25 chr2 44092325 44092527 -206595327 + AluJb SINE Alu 100 296 -16 2412 92 0 0 chr2 44092532 44092836 -206595018 + AluSg SINE Alu 5 308 -2 804 171 0 0 chr2 44092848 44092971 -206594883 + AluJb SINE Alu 2 124 -188 26 0 0 0 chr2 44092971 44092997 -206594857 + AT_rich Low_complexity Low_complexity 1 26 0 1887 133 3 27 chr2 44093000 44093300 -206594554 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr2 44094449 44094472 -206593382 + AT_rich Low_complexity Low_complexity 1 23 0 231 183 56 42 chr2 44094732 44094803 -206593051 + L1ME LINE L1 5318 5389 -2419 2290 97 3 3 chr2 44094803 44095113 -206592741 + AluY SINE Alu 2 311 0 2019 131 3 0 chr2 44095174 44095465 -206592389 + AluSx SINE Alu 8 299 -13 24 0 0 0 chr2 44095492 44095516 -206592338 + AT_rich Low_complexity Low_complexity 1 24 0 1979 120 10 19 chr2 44095758 44096066 -206591788 - AluSc SINE Alu -4 305 1 2436 80 0 3 chr2 44096121 44096433 -206591421 - AluY SINE Alu 0 311 1 2134 102 3 20 chr2 44096473 44096778 -206591076 - AluSx SINE Alu -12 300 1 1991 151 0 19 chr2 44096980 44097298 -206590556 - AluJb SINE Alu 0 312 1 323 318 0 0 chr2 44097667 44097777 -206590077 + L1ME LINE L1 5606 5715 -406 1693 113 140 0 chr2 44097943 44098208 -206589646 + AluSq SINE Alu 1 302 -11 28 0 0 0 chr2 44098346 44098374 -206589480 + AT_rich Low_complexity Low_complexity 1 28 0 1265 191 70 33 chr2 44098374 44098646 -206589208 - AluJo SINE Alu -30 282 1 1709 182 0 10 chr2 44099020 44099322 -206588532 - AluJo SINE Alu -13 299 1 368 235 152 29 chr2 44099882 44100086 -206587768 + L1M4 LINE L1 4419 4647 -1499 1502 206 121 57 chr2 44100153 44100410 -206587444 + Charlie1a DNA MER1_type 40 279 -2482 564 186 62 0 chr2 44100410 44100523 -206587331 - L1MB5 LINE L1 -2 6172 6053 2154 120 10 3 chr2 44100531 44100831 -206587023 - AluSx SINE Alu -10 302 1 1502 206 121 57 chr2 44100831 44100905 -206586949 + Charlie1a DNA MER1_type 285 353 -2408 1626 210 0 3 chr2 44100905 44101205 -206586649 - AluJo SINE Alu -13 299 1 1502 206 121 57 chr2 44101205 44101352 -206586502 + Charlie1a DNA MER1_type 353 559 -896 718 199 105 66 chr2 44101376 44101400 -206586454 + Charlie1a DNA MER1_type 1133 1155 -1606 591 94 24 0 chr2 44101400 44101485 -206586369 + L1MA9 LINE L1 6219 6305 -7 718 199 105 66 chr2 44101485 44101544 -206586310 + Charlie1a DNA MER1_type 1155 1210 -1551 10297 51 59 6 chr2 44101544 44102850 -206585004 - SVA Other Other -2 1384 10 718 199 105 66 chr2 44102850 44103051 -206584803 + Charlie1a DNA MER1_type 1210 1429 -26 816 202 0 0 chr2 44103071 44103200 -206584654 - FLAM_C SINE Alu -4 129 1 276 269 56 62 chr2 44103251 44103411 -206584443 + L1M4 LINE L1 4685 4843 -1303 397 198 0 12 chr2 44103599 44103685 -206584169 - MIR SINE MIR 0 262 178 350 244 24 0 chr2 44104099 44104181 -206583673 - MIR SINE MIR -98 164 81 639 179 72 5 chr2 44104210 44104362 -206583492 + L1MB3 LINE L1 5652 5815 -368 830 152 7 41 chr2 44104362 44104507 -206583347 + FRAM SINE Alu 1 138 -38 393 22 0 0 chr2 44104510 44104556 -206583298 + (TC)n Simple_repeat Simple_repeat 2 47 0 351 0 0 0 chr2 44104558 44104597 -206583257 + (CA)n Simple_repeat Simple_repeat 2 40 0 1324 150 113 30 chr2 44104603 44104903 -206582951 + L1MB3 LINE L1 5816 6140 -43 23 0 0 0 chr2 44104912 44104935 -206582919 + AT_rich Low_complexity Low_complexity 1 23 0 697 216 0 24 chr2 44104957 44105082 -206582772 + FLAM_A SINE Alu 1 122 -11 441 234 9 37 chr2 44105325 44105432 -206582422 - L2 LINE L2 0 3272 3169 2426 80 0 0 chr2 44105869 44106171 -206581683 - AluY SINE Alu -9 302 1 220 351 79 35 chr2 44106270 44106384 -206581470 + MIR SINE MIR 23 141 -67 2110 115 24 0 chr2 44106754 44107049 -206580805 - AluSg SINE Alu -8 302 1 1178 82 22 43 chr2 44107516 44107700 -206580154 + AluSq SINE Alu 132 311 -2 1313 210 95 0 chr2 44108407 44108551 -206579303 - AluJo SINE Alu -25 287 158 180 0 0 0 chr2 44108551 44108571 -206579283 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1313 210 95 0 chr2 44108571 44108688 -206579166 - AluJo SINE Alu -154 158 1 2388 77 3 3 chr2 44109137 44109434 -206578420 + AluSg SINE Alu 1 297 -13 451 265 77 33 chr2 44109536 44109808 -206578046 + L1ME LINE L1 4767 5050 -1096 28 0 0 0 chr2 44109819 44109847 -206578007 + AT_rich Low_complexity Low_complexity 1 28 0 270 317 41 78 chr2 44109849 44110092 -206577762 + L1ME LINE L1 5638 5871 -299 1647 137 3 32 chr2 44110632 44110916 -206576938 - AluJb SINE Alu -2 310 35 693 161 0 57 chr2 44111183 44111307 -206576547 + FLAM_C SINE Alu 2 118 -25 201 240 92 0 chr2 44111473 44111547 -206576307 + MIR SINE MIR 93 172 -63 2087 103 10 7 chr2 44111780 44112071 -206575783 + AluSg SINE Alu 1 292 -18 691 178 31 8 chr2 44112424 44112553 -206575301 - AluSq/x SINE Alu -179 133 2 2000 122 7 0 chr2 44112570 44112856 -206574998 - AluSg SINE Alu -21 289 2 2042 125 0 14 chr2 44112882 44113210 -206574644 - AluSq SINE Alu 0 324 1 2104 115 0 3 chr2 44113769 44114055 -206573799 - AluSg SINE Alu -24 286 2 22 0 0 0 chr2 44114115 44114137 -206573717 + AT_rich Low_complexity Low_complexity 1 22 0 2482 196 115 35 chr2 44114142 44114463 -206573391 - LTR26E LTR ERV1 0 622 328 1936 125 21 10 chr2 44114463 44114752 -206573102 - AluSx SINE Alu -19 293 2 2482 196 115 35 chr2 44114752 44115006 -206572848 - LTR26E LTR ERV1 -294 328 1 529 214 149 6 chr2 44115236 44115404 -206572450 - L1MC4a LINE L1 -1944 5864 5673 1460 133 9 120 chr2 44116191 44116368 -206571486 - L1MA2 LINE L1 0 6304 6109 1897 160 0 0 chr2 44116368 44116668 -206571186 - AluSq SINE Alu -13 300 1 1460 133 9 120 chr2 44116668 44116770 -206571084 - L1MA2 LINE L1 -195 6109 6061 2294 74 7 7 chr2 44116770 44117068 -206570786 - AluY SINE Alu -13 298 1 1460 133 9 120 chr2 44117068 44117103 -206570751 - L1MA2 LINE L1 -243 6061 6024 2089 111 0 52 chr2 44117660 44117967 -206569887 + AluSc SINE Alu 1 291 -18 1832 157 18 0 chr2 44117979 44118265 -206569589 + AluJb SINE Alu 1 291 -21 2487 31 17 10 chr2 44118287 44118580 -206569274 + AluY SINE Alu 1 295 -16 1117 172 37 19 chr2 44118664 44118879 -206568975 + MER20 DNA MER1_type 1 219 0 1982 133 95 17 chr2 44118975 44119321 -206568533 - THE1C LTR MaLR -2 373 1 26 30 0 0 chr2 44119330 44119363 -206568491 + AT_rich Low_complexity Low_complexity 1 33 0 254 205 0 36 chr2 44119616 44119699 -206568155 - HAL1 LINE L1 -417 2090 2011 403 251 114 54 chr2 44119719 44119886 -206567968 - HAL1 LINE L1 -855 1652 1476 2070 135 0 7 chr2 44120023 44120320 -206567534 + AluSx SINE Alu 1 295 -17 1852 151 7 13 chr2 44120442 44120746 -206567108 - AluSx SINE Alu -10 302 1 272 248 21 99 chr2 44120749 44120890 -206566964 - MER5A DNA MER1_type -1 188 59 1747 156 7 11 chr2 44120936 44121243 -206566611 + AluJo SINE Alu 1 306 0 2321 95 3 0 chr2 44121296 44121602 -206566252 - AluSg SINE Alu -3 307 1 501 128 163 0 chr2 44122638 44122724 -206565130 + HY3 scRNA scRNA 1 100 -1 1305 137 122 38 chr2 44123067 44123330 -206564524 - AluJo SINE Alu -13 299 15 22 0 0 0 chr2 44123567 44123589 -206564265 + AT_rich Low_complexity Low_complexity 1 22 0 1290 117 0 0 chr2 44123729 44123908 -206563946 - AluSg/x SINE Alu -3 309 131 1906 156 0 0 chr2 44125596 44125884 -206561970 - AluSx SINE Alu -24 288 1 180 0 0 0 chr2 44125886 44125906 -206561948 + (T)n Simple_repeat Simple_repeat 1 20 0 2023 105 0 67 chr2 44126243 44126556 -206561298 + AluSg SINE Alu 1 292 -18 980 138 0 20 chr2 44126564 44126716 -206561138 + L1PB4 LINE L1 6006 6154 -2 887 129 0 15 chr2 44127059 44127191 -206560663 + FLAM_C SINE Alu 9 138 -5 2282 104 3 0 chr2 44127322 44127621 -206560233 - AluSq SINE Alu -13 300 1 230 229 43 0 chr2 44128156 44128226 -206559628 + (TATG)n Simple_repeat Simple_repeat 1 73 0 26 0 0 0 chr2 44129058 44129084 -206558770 + AT_rich Low_complexity Low_complexity 1 26 0 608 152 9 9 chr2 44129084 44129189 -206558665 - FLAM_C SINE Alu -25 118 14 10779 118 34 58 chr2 44129224 44129805 -206558049 + Tigger1 DNA MER2_type 9 602 -1816 463 86 0 29 chr2 44129805 44129875 -206557979 + Alu SINE Alu 238 305 -7 10779 118 34 58 chr2 44129875 44129919 -206557935 + Tigger1 DNA MER2_type 602 646 -1772 1896 156 7 0 chr2 44129919 44130236 -206557618 + AluSx SINE Alu 1 319 0 10779 118 34 58 chr2 44130236 44131549 -206556305 + Tigger1 DNA MER2_type 646 1970 -448 2405 60 7 3 chr2 44131549 44131851 -206556003 + AluY SINE Alu 1 303 -8 10779 118 34 58 chr2 44131851 44131902 -206555952 + Tigger1 DNA MER2_type 1970 2021 -397 1785 136 18 14 chr2 44131905 44132185 -206555669 - AluSx SINE Alu -21 291 11 2206 108 0 7 chr2 44132513 44132809 -206555045 - AluSq SINE Alu -19 294 1 495 342 31 0 chr2 44133534 44133727 -206554127 + MIR SINE MIR 29 227 -35 2070 96 3 58 chr2 44133781 44134093 -206553761 + AluSx SINE Alu 1 295 -17 286 206 32 71 chr2 44134836 44134962 -206552892 + MER20 DNA MER1_type 7 127 -92 2202 82 38 3 chr2 44135100 44135392 -206552462 - AluY SINE Alu -5 306 5 3035 114 88 7 chr2 44135559 44136096 -206551758 - Tigger3(Golem) DNA MER2_type -2 3027 2448 1860 133 7 33 chr2 44136176 44136477 -206551377 + AluJb SINE Alu 2 294 -18 1961 95 60 11 chr2 44136479 44136764 -206551090 + AluSq SINE Alu 1 299 -14 740 176 52 150 chr2 44136782 44137163 -206550691 - LTR49 LTR ERV1 -245 350 7 706 168 0 8 chr2 44137193 44137312 -206550542 - FLAM_C SINE Alu -15 118 1 329 253 11 21 chr2 44137454 44137549 -206550305 - L1M4 LINE L1 -1981 4165 4072 22 0 0 0 chr2 44138579 44138601 -206549253 + AT_rich Low_complexity Low_complexity 1 22 0 190 293 20 101 chr2 44139028 44139127 -206548727 - L2 LINE L2 -33 3280 3190 1518 210 4 11 chr2 44139304 44139580 -206548274 - AluJb SINE Alu -38 274 1 2164 141 0 0 chr2 44140268 44140567 -206547287 - AluSx SINE Alu -13 299 1 361 292 76 21 chr2 44141479 44141623 -206546231 + L1ME2 LINE L1 5725 5876 -288 26 0 0 0 chr2 44141771 44141797 -206546057 + AT_rich Low_complexity Low_complexity 1 26 0 874 165 0 0 chr2 44142310 44142443 -206545411 + FLAM_C SINE Alu 1 133 0 2262 104 3 19 chr2 44142449 44142765 -206545089 + AluSx SINE Alu 1 311 -1 1679 265 136 8 chr2 44142773 44143434 -206544420 + L1ME3A LINE L1 5417 6162 -8 1836 147 0 71 chr2 44143465 44143791 -206544063 + AluJo SINE Alu 8 310 -2 2205 123 7 0 chr2 44144743 44145053 -206542801 - AluSx SINE Alu 0 312 1 1832 189 0 6 chr2 44145057 44145369 -206542485 - AluJo SINE Alu -2 310 1 287 149 14 68 chr2 44145455 44145529 -206542325 - LTR50 LTR ERVL -720 75 6 2157 115 3 0 chr2 44145665 44145961 -206541893 + AluSp SINE Alu 1 297 -16 280 149 21 0 chr2 44146336 44146383 -206541471 - Alu SINE Alu -254 48 1 394 143 0 0 chr2 44146646 44146709 -206541145 + Tigger5 DNA MER2_type 2237 2299 -24 851 309 129 5 chr2 44146785 44147157 -206540697 - LTR16A LTR ERVL -2 448 31 259 213 120 13 chr2 44147175 44147250 -206540604 - MLT1I LTR MaLR -46 363 281 * 272 263 163 19 chr2 44147222 44147526 -206540328 - MLT1H LTR MaLR -161 388 4 2362 93 0 10 chr2 44147810 44148122 -206539732 - AluSc SINE Alu 0 309 1 47 0 0 0 chr2 44148176 44148223 -206539631 + AT_rich Low_complexity Low_complexity 1 47 0 302 171 98 12 chr2 44148227 44148309 -206539545 - AluSg SINE Alu -211 89 1 2066 139 3 3 chr2 44148346 44148656 -206539198 - AluSg SINE Alu 0 310 1 476 237 114 41 chr2 44148674 44148893 -206538961 - L1ME3 LINE L1 -1 6161 5927 1972 164 0 0 chr2 44149705 44150003 -206537851 + AluJb SINE Alu 1 298 -14 1292 169 58 73 chr2 44150188 44150398 -206537456 - MER44D DNA MER2_type -1882 609 397 2307 77 27 61 chr2 44150398 44150554 -206537300 + THE1B LTR MaLR 3 163 -201 2107 124 3 7 chr2 44150554 44150860 -206536994 - AluSx SINE Alu -2 310 6 2307 77 27 61 chr2 44150860 44151078 -206536776 + THE1B LTR MaLR 163 364 0 1292 169 58 73 chr2 44151078 44151210 -206536644 - MER44D DNA MER2_type -2094 397 2 2117 117 37 0 chr2 44151551 44151850 -206536004 - AluSx SINE Alu -2 310 1 434 243 37 44 chr2 44152168 44152304 -206535550 - MIR SINE MIR -56 206 72 1425 178 53 18 chr2 44153980 44154261 -206533593 - AluJb SINE Alu -21 291 1 1765 159 10 10 chr2 44154725 44155021 -206532833 - AluJb SINE Alu -5 307 12 527 174 0 0 chr2 44155042 44155134 -206532720 + FRAM SINE Alu 77 168 -8 28 0 0 0 chr2 44155136 44155164 -206532690 + AT_rich Low_complexity Low_complexity 1 28 0 1401 157 81 4 chr2 44155171 44155407 -206532447 + AluJo SINE Alu 26 279 -33 24 91 0 0 chr2 44155466 44155532 -206532322 + AT_rich Low_complexity Low_complexity 1 66 0 1997 135 3 3 chr2 44156012 44156315 -206531539 + AluSg SINE Alu 1 303 -7 3291 124 56 2 chr2 44156622 44157121 -206530733 - MER1A DNA MER1_type -1 526 1 25 0 0 0 chr2 44157132 44157157 -206530697 + AT_rich Low_complexity Low_complexity 1 25 0 745 122 65 14 chr2 44157157 44157296 -206530558 - L1MA9 LINE L1 0 6312 6167 201 296 92 71 chr2 44157997 44158095 -206529759 - L2 LINE L2 -19 3253 3154 1864 210 30 74 chr2 44159531 44159625 -206528229 - L1ME1 LINE L1 -18 6148 6051 885 136 8 0 chr2 44159625 44159757 -206528097 + FLAM_C SINE Alu 1 133 0 2132 120 0 7 chr2 44159765 44160056 -206527798 + AluSx SINE Alu 3 291 -21 1973 144 0 26 chr2 44160057 44160362 -206527492 + AluSx SINE Alu 1 297 -15 1864 210 30 74 chr2 44160362 44160852 -206527002 - L1ME1 LINE L1 -121 6045 5579 857 245 22 24 chr2 44160854 44161244 -206526610 + MLT2F LTR ERVL 3 436 -227 273 171 0 0 chr2 44161245 44161300 -206526554 + L1MC/D LINE L1 5525 5582 -587 232 162 0 0 chr2 44161302 44161339 -206526515 - MLT2F LTR ERVL -2 661 625 1374 172 0 51 chr2 44161347 44161603 -206526251 - AluJo SINE Alu -68 244 2 603 219 61 15 chr2 44161606 44161878 -206525976 - L1M1 LINE L1 -743 5403 5204 * 1690 206 41 52 chr2 44161876 44162492 -206525362 - L1M4 LINE L1 -1827 4555 3947 1209 224 79 83 chr2 44162552 44163221 -206524633 - L1M4 LINE L1 -2414 3968 3301 755 198 5 86 chr2 44163221 44163408 -206524446 + FAM SINE Alu 3 174 -1 1209 224 79 83 chr2 44163408 44163461 -206524393 - L1M4 LINE L1 -3081 3301 3249 242 333 20 25 chr2 44163616 44163817 -206524037 - L1M4 LINE L1 -4883 1501 1302 390 124 0 174 chr2 44163835 44163901 -206523953 - L1MA2 LINE L1 0 6304 6267 2053 92 13 70 chr2 44163901 44164062 -206523792 - AluSc SINE Alu -13 296 160 2047 129 0 0 chr2 44164062 44164378 -206523476 - AluSx SINE Alu 0 312 20 2053 92 13 70 chr2 44164378 44164530 -206523324 - AluSc SINE Alu -149 160 1 390 124 0 174 chr2 44164530 44164584 -206523270 - L1MA2 LINE L1 -37 6267 6205 3257 122 33 4 chr2 44164633 44165577 -206522277 - L1M1 LINE L1 -4298 3267 2247 893 96 44 0 chr2 44215578 44215713 -206472141 + MER4-int LTR ERV1 1959 2099 -4499 866 116 78 0 chr2 44215714 44215843 -206472011 - LTR8 LTR ERV1 -552 139 1 2849 117 80 16 chr2 44215843 44216391 -206471463 + MER4-int LTR ERV1 2737 3319 -3279 2148 75 32 75 chr2 44216396 44216565 -206471289 + MER4-int LTR ERV1 3919 4094 -2504 2036 134 3 7 chr2 44216565 44216857 -206470997 - AluSg SINE Alu -19 291 1 2148 75 32 75 chr2 44216857 44217059 -206470795 + MER4-int LTR ERV1 4094 4274 -2324 183 114 0 0 chr2 44217075 44217110 -206470744 + (A)n Simple_repeat Simple_repeat 1 35 0 30 45 0 0 chr2 44217163 44217207 -206470647 + AT_rich Low_complexity Low_complexity 1 44 0 244 324 42 133 chr2 44217541 44217742 -206470112 - L2 LINE L2 -13 3259 3104 1933 176 0 3 chr2 44217742 44218055 -206469799 - AluJb SINE Alu 0 312 1 244 324 42 133 chr2 44218055 44218214 -206469640 - L2 LINE L2 -168 3104 2932 486 0 0 0 chr2 44220704 44220758 -206467096 + (CA)n Simple_repeat Simple_repeat 2 55 0 1731 145 23 0 chr2 44220794 44221056 -206466798 + AluJo SINE Alu 1 268 -44 189 0 0 0 chr2 44221063 44221084 -206466770 + (CA)n Simple_repeat Simple_repeat 1 21 0 189 237 17 17 chr2 44221513 44221572 -206466282 - MIR SINE MIR -31 231 173 * 451 289 44 0 chr2 44221568 44221682 -206466172 + L2 LINE L2 3153 3271 -1 307 339 16 16 chr2 44221688 44221809 -206466045 - MIR SINE MIR -131 131 11 391 191 123 0 chr2 44221965 44222133 -206465721 - LTR50 LTR ERVL -169 626 358 366 232 106 0 chr2 44222171 44222322 -206465532 - LTR50 LTR ERVL -589 206 40 2345 45 0 0 chr2 44222784 44223051 -206464803 - L1PA3 LINE L1 -3 6152 5886 1429 209 3 21 chr2 44223341 44223624 -206464230 + AluJo SINE Alu 5 282 -30 207 0 0 0 chr2 44223628 44223651 -206464203 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 213 394 32 19 chr2 44224055 44224210 -206463644 + MIR SINE MIR 32 188 -74 10667 157 41 30 chr2 44224235 44225514 -206462340 - L1MA3 LINE L1 0 7724 6461 2356 76 10 25 chr2 44225514 44225828 -206462026 - AluY SINE Alu -2 309 1 10667 157 41 30 chr2 44225828 44227797 -206460057 - L1MA3 LINE L1 -1263 6461 4438 2797 78 29 0 chr2 44227798 44228143 -206459711 - THE1A LTR MaLR 0 355 1 10636 90 81 0 chr2 44228143 44229605 -206458249 - THE1A-int LTR MaLR 0 1580 1 2886 77 11 0 chr2 44229605 44229956 -206457898 - THE1A LTR MaLR 0 355 1 806 181 7 0 chr2 44229956 44230111 -206457743 - L1MA3 LINE L1 -3124 4441 4286 832 149 8 8 chr2 44230134 44230268 -206457586 - AluJo SINE Alu -178 134 1 16011 145 33 25 chr2 44230268 44234111 -206453743 - L1MA3 LINE L1 -3266 4299 12 418 303 26 19 chr2 44234111 44234266 -206453588 - MIR SINE MIR -57 205 50 15248 113 18 57 chr2 44234331 44234448 -206453406 - Tigger1 DNA MER2_type 0 2418 2298 1594 183 8 0 chr2 44234448 44234716 -206453138 + AluJb SINE Alu 1 270 -42 9117 43 6 0 chr2 44234716 44235781 -206452073 + MER11C LTR ERVK 1 1071 0 15248 113 18 57 chr2 44235781 44236697 -206451157 - Tigger1 DNA MER2_type -119 2299 1348 1807 152 25 4 chr2 44236697 44236973 -206450881 + AluJo SINE Alu 1 282 -30 225 65 0 0 chr2 44236974 44237005 -206450849 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 15248 113 18 57 chr2 44237005 44238485 -206449369 - Tigger1 DNA MER2_type -1069 1349 1 2060 145 0 0 chr2 44238595 44238898 -206448956 - AluSx SINE Alu 0 312 10 533 174 17 35 chr2 44241882 44241997 -206445857 - HAL1 LINE L1 -1274 1233 1121 709 174 0 61 chr2 44242022 44242154 -206445700 - FLAM_C SINE Alu -19 124 1 578 233 93 5 chr2 44242183 44242293 -206445561 - L1M4 LINE L1 -3621 3944 3845 2227 108 0 0 chr2 44242293 44242580 -206445274 - AluSc SINE Alu -22 287 1 578 233 93 5 chr2 44242580 44242662 -206445192 - L1M4 LINE L1 -3720 3845 3735 2927 150 56 71 chr2 44242797 44243470 -206444384 - MER21B LTR ERV1 -1 862 372 2237 107 7 0 chr2 44243470 44243768 -206444086 - AluSx SINE Alu -12 300 1 2927 150 56 71 chr2 44243768 44244059 -206443795 - MER21B LTR ERV1 -491 372 78 10099 161 73 52 chr2 44244166 44244226 -206443628 - L1M4 LINE L1 -5319 2246 2189 2208 129 0 7 chr2 44244226 44244535 -206443319 - AluSx SINE Alu -5 307 1 10099 161 73 52 chr2 44244535 44246530 -206441324 - L1M4 LINE L1 -5376 2189 149 1607 153 59 14 chr2 44246667 44246955 -206440899 + AluJb SINE Alu 1 301 -11 2236 128 3 3 chr2 44247161 44247473 -206440381 + AluSx SINE Alu 1 312 0 784 177 8 0 chr2 44248433 44248563 -206439291 + FLAM_C SINE Alu 2 132 -1 183 42 0 0 chr2 44249191 44249215 -206438639 + (GA)n Simple_repeat Simple_repeat 2 25 0 314 208 0 0 chr2 44250222 44250270 -206437584 + AluJ/monomer SINE Alu 1 48 -251 340 242 30 0 chr2 44250938 44251004 -206436850 + MER58A DNA MER1_type 1 68 -39 1299 164 19 0 chr2 44251010 44251218 -206436636 - AluJo SINE Alu -12 300 89 521 281 276 31 chr2 44251241 44251925 -206435929 - L2 LINE L2 -573 2741 1890 1649 195 14 3 chr2 44252627 44252914 -206434940 + AluJb SINE Alu 1 290 -22 22 56 0 0 chr2 44252926 44252962 -206434892 + AT_rich Low_complexity Low_complexity 1 36 0 1080 138 63 0 chr2 44252962 44253121 -206434733 + AluJb SINE Alu 135 303 -9 1489 171 51 41 chr2 44253126 44253419 -206434435 + AluJo SINE Alu 1 296 -16 2308 78 14 7 chr2 44253442 44253735 -206434119 + AluSq SINE Alu 1 295 -18 2401 106 0 0 chr2 44253737 44254049 -206433805 + AluSq SINE Alu 1 312 -1 1465 136 0 37 chr2 44254782 44255024 -206432830 - AluJo SINE Alu -31 281 49 2432 68 0 0 chr2 44255417 44255713 -206432141 + AluY SINE Alu 1 296 -15 261 240 40 0 chr2 44256446 44256521 -206431333 - MER103 DNA DNA -31 135 58 2272 92 0 3 chr2 44257231 44257514 -206430340 + AluSx SINE Alu 1 282 -30 22 0 0 0 chr2 44257619 44257641 -206430213 + AT_rich Low_complexity Low_complexity 1 22 0 1558 52 5 0 chr2 44257903 44258094 -206429760 + L1PA3 LINE L1 5961 6152 -3 237 163 0 0 chr2 44258757 44258806 -206429048 + C-rich Low_complexity Low_complexity 3 51 0 676 183 53 0 chr2 44258809 44258940 -206428914 - AluJb SINE Alu -41 271 134 2238 109 0 13 chr2 44259051 44259355 -206428499 - AluY SINE Alu -11 300 1 206 233 0 0 chr2 44260953 44260996 -206426858 + CT-rich Low_complexity Low_complexity 2 44 0 2459 84 13 0 chr2 44262079 44262387 -206425467 + AluSq SINE Alu 1 312 -1 2149 126 13 7 chr2 44262605 44262914 -206424940 + AluSx SINE Alu 1 311 -1 288 0 0 0 chr2 44263592 44263624 -206424230 + (TG)n Simple_repeat Simple_repeat 2 33 0 942 171 59 11 chr2 44264111 44264298 -206423556 - AluJo SINE Alu -19 293 98 665 112 9 19 chr2 44264548 44264655 -206423199 + U6 snRNA snRNA 1 106 -1 894 274 132 45 chr2 44265544 44266037 -206421817 - L1MC4a LINE L1 -1960 5848 5313 23 78 0 0 chr2 44266160 44266211 -206421643 + AT_rich Low_complexity Low_complexity 1 51 0 2026 101 64 34 chr2 44266462 44266789 -206421065 - MER1B DNA MER1_type 0 337 1 899 117 58 0 chr2 44267215 44267352 -206420502 - FRAM SINE Alu -6 170 26 5086 92 15 12 chr2 44268137 44268866 -206418988 - L1PA13 LINE L1 -5 6158 5428 207 0 0 0 chr2 44268936 44268959 -206418895 + (T)n Simple_repeat Simple_repeat 1 23 0 200 35 35 0 chr2 44269568 44269597 -206418257 + (CA)n Simple_repeat Simple_repeat 1 30 0 946 120 0 0 chr2 44269859 44269992 -206417862 - FLAM_C SINE Alu -2 141 9 1138 103 0 0 chr2 44270483 44270673 -206417181 - AluY SINE Alu 0 326 137 1706 114 38 0 chr2 44270800 44270915 -206416939 - AluSc SINE Alu -63 246 137 390 21 0 0 chr2 44270915 44270962 -206416892 + (TG)n Simple_repeat Simple_repeat 2 48 0 1706 114 38 0 chr2 44270962 44271083 -206416771 - AluSc SINE Alu -172 137 1 292 104 0 21 chr2 44271087 44271135 -206416719 - L1ME2 LINE L1 -226 5938 5892 * 850 299 46 38 chr2 44271125 44271627 -206416227 - L1MEc LINE L1 -5231 1030 525 877 254 34 131 chr2 44271700 44272190 -206415664 - L1MEc LINE L1 -5538 532 105 2128 131 0 0 chr2 44272190 44272487 -206415367 - AluSx SINE Alu -15 297 1 877 254 34 131 chr2 44272487 44272578 -206415276 - L1MEc LINE L1 -5965 105 7 2065 247 74 45 chr2 44272631 44272700 -206415154 - HAL1 LINE L1 -1476 1031 965 2346 97 3 0 chr2 44272700 44273008 -206414846 - AluSc SINE Alu 0 309 1 2065 247 74 45 chr2 44273008 44273825 -206414029 - HAL1 LINE L1 -1542 965 119 265 239 45 0 chr2 44274711 44274778 -206413076 + MIR SINE MIR 46 115 -147 1708 164 7 20 chr2 44275649 44275948 -206411906 - AluJo SINE Alu -17 295 1 696 254 120 49 chr2 44278728 44279196 -206408658 - LTR33A LTR ERVL -8 515 15 2314 112 0 0 chr2 44280298 44280601 -206407253 - AluSx SINE Alu -9 303 1 790 183 78 0 chr2 44281239 44281392 -206406462 + MIR SINE MIR 67 231 -31 265 271 71 71 chr2 44281505 44281774 -206406080 + L2 LINE L2 1704 1972 -1342 233 195 0 39 chr2 44286685 44286762 -206401092 + GA-rich Low_complexity Low_complexity 6 79 0 262 200 200 0 chr2 44288022 44288112 -206399742 + MIR SINE MIR 106 213 -49 2697 45 0 3 chr2 44288114 44288423 -206399431 + AluY SINE Alu 1 308 -3 1409 145 9 18 chr2 44289339 44289567 -206398287 + AluJb SINE Alu 86 311 -1 419 306 94 76 chr2 44291609 44291992 -206395862 + L2 LINE L2 2882 3271 -1 399 21 0 0 chr2 44292289 44292337 -206395517 + (TG)n Simple_repeat Simple_repeat 1 48 0 192 97 0 0 chr2 44292339 44292370 -206395484 + (GA)n Simple_repeat Simple_repeat 2 32 0 278 280 13 0 chr2 44293572 44293647 -206394207 - MIR SINE MIR -127 135 60 203 237 17 51 chr2 44293671 44293730 -206394124 - MIR3 SINE MIR -38 170 114 1789 103 3 155 chr2 44293814 44294181 -206393673 + AluY SINE Alu 1 311 0 2446 100 0 0 chr2 44294918 44295218 -206392636 + AluSx SINE Alu 1 300 -12 246 167 97 0 chr2 44295349 44295421 -206392433 - L1MB7 LINE L1 -14 6170 6092 * 286 172 46 11 chr2 44295401 44295488 -206392366 + L1ME4a LINE L1 6032 6121 0 377 154 0 51 chr2 44295577 44295673 -206392181 + AluJ/FRAM SINE Alu 233 302 0 414 300 0 0 chr2 44295941 44296051 -206391803 + MIR SINE MIR 146 255 -7 499 149 35 0 chr2 44296216 44296303 -206391551 + MER4A LTR ERV1 1 90 -574 2503 69 0 13 chr2 44296303 44296609 -206391245 - AluY SINE Alu -9 302 1 1728 124 5 77 chr2 44296629 44297001 -206390853 + MER4A LTR ERV1 261 664 0 2700 112 45 5 chr2 44297004 44297651 -206390203 + MER4A-int LTR ERV1 1 809 -5789 2377 106 7 0 chr2 44297686 44297989 -206389865 + AluSg SINE Alu 1 305 -5 253 154 77 19 chr2 44298057 44298109 -206389745 + LTR49 LTR ERV1 258 312 -283 1342 155 53 64 chr2 44298138 44298662 -206389192 + MER4-int LTR ERV1 503 1568 -4320 228 86 29 0 chr2 44298665 44298700 -206389154 + U2 snRNA snRNA 1 36 -152 2347 90 7 56 chr2 44298700 44298951 -206388903 + MER4-int LTR ERV1 1558 1820 -4778 2332 111 7 0 chr2 44298951 44299257 -206388597 - AluSp SINE Alu -5 308 1 2347 90 7 56 chr2 44299257 44299345 -206388509 + MER4-int LTR ERV1 1820 1876 -4722 2305 108 0 7 chr2 44299345 44299650 -206388204 - AluSg1 SINE Alu -5 304 2 2347 90 7 56 chr2 44299650 44299719 -206388135 + MER4-int LTR ERV1 1876 1947 -4651 349 142 0 5 chr2 44299719 44299784 -206388070 + Alu SINE Alu 1 45 -263 335 131 0 0 chr2 44299885 44299946 -206387908 + AluSp/q SINE Alu 241 301 -2 12558 103 66 31 chr2 44299950 44300145 -206387709 + MER4A-int LTR ERV1 4293 4480 -2118 2310 90 7 0 chr2 44300145 44300434 -206387420 - AluSg SINE Alu -19 291 1 12558 103 66 31 chr2 44300434 44301013 -206386841 + MER4A-int LTR ERV1 4480 5038 -1560 2530 85 0 0 chr2 44301013 44301320 -206386534 - AluSc SINE Alu -1 308 2 12558 103 66 31 chr2 44301320 44301601 -206386253 + MER4A-int LTR ERV1 5038 5308 -1290 2433 71 0 32 chr2 44301601 44301909 -206385945 + AluY SINE Alu 1 298 -13 12558 103 66 31 chr2 44301909 44302406 -206385448 + MER4A-int LTR ERV1 5308 5786 -812 2365 104 0 3 chr2 44302406 44302703 -206385151 + AluSq SINE Alu 1 296 -17 12558 103 66 31 chr2 44302703 44303374 -206384480 + MER4A-int LTR ERV1 5786 6596 -2 527 132 22 11 chr2 44303381 44303472 -206384382 + MER4A LTR ERV1 1 92 -572 1732 126 161 75 chr2 44303478 44303850 -206384004 + MER4A LTR ERV1 261 664 0 348 286 81 76 chr2 44304903 44305113 -206382741 - MIR SINE MIR -23 239 29 210 139 0 0 chr2 44305222 44305258 -206382596 + (G)n Simple_repeat Simple_repeat 1 36 0 371 268 12 0 chr2 44305568 44305650 -206382204 + MER81 DNA DNA 29 111 -3 442 238 171 24 chr2 44305767 44305931 -206381923 + MIR SINE MIR 60 247 -15 267 266 95 22 chr2 44305943 44306165 -206381689 + L1ME4a LINE L1 5708 5945 -176 318 186 142 26 chr2 44306176 44306289 -206381565 + L1ME4a LINE L1 5995 6120 -1 1771 177 23 7 chr2 44306295 44306595 -206381259 + AluJb SINE Alu 1 305 -7 549 0 0 0 chr2 44306719 44306780 -206381074 + (TG)n Simple_repeat Simple_repeat 2 62 0 232 309 155 30 chr2 44307194 44307362 -206380492 - MIR SINE MIR -9 253 65 204 244 0 0 chr2 44308314 44308355 -206379499 + L2 LINE L2 3230 3270 -2 404 274 57 0 chr2 44309870 44309994 -206377860 + MIR SINE MIR 127 257 -5 1926 123 45 0 chr2 44310008 44310301 -206377553 + AluSx SINE Alu 1 305 0 219 311 194 0 chr2 44310304 44310407 -206377447 - MIR3 SINE MIR -52 156 34 2330 109 3 0 chr2 44311238 44311541 -206376313 - AluSx SINE Alu -8 304 1 261 250 163 0 chr2 44311626 44311706 -206376148 + L2 LINE L2 2672 2764 -550 1624 146 26 16 chr2 44311728 44312036 -206375818 + MLT1C LTR MaLR 9 319 -148 265 300 29 44 chr2 44312201 44312382 -206375472 + MIR SINE MIR 4 226 -36 208 271 0 17 chr2 44313097 44313156 -206374698 + G-rich Low_complexity Low_complexity 5 62 0 205 211 0 0 chr2 44314557 44314595 -206373259 + T-rich Low_complexity Low_complexity 1 38 0 917 287 131 49 chr2 44315670 44316027 -206371827 - L1M4 LINE L1 -3247 2899 2480 1523 127 93 21 chr2 44316027 44316318 -206371536 - AluJb SINE Alu 0 312 1 917 287 131 49 chr2 44316318 44316511 -206371343 - L1M4 LINE L1 -3666 2480 2304 969 261 48 11 chr2 44316517 44316838 -206371016 + MLT1H LTR MaLR 1 343 -249 405 268 0 16 chr2 44316938 44317065 -206370789 - MER113 DNA MER1_type? -395 126 2 206 300 50 50 chr2 44317097 44317197 -206370657 + L2 LINE L2 3154 3253 -19 1985 113 20 27 chr2 44318420 44318720 -206369134 - AluSx SINE Alu -14 298 1 2537 65 0 10 chr2 44318918 44319225 -206368629 - AluY SINE Alu -7 304 1 2230 94 14 0 chr2 44319560 44319848 -206368006 - AluSx SINE Alu -19 293 2 297 148 0 19 chr2 44319850 44319904 -206367950 + MLT1G1 LTR MaLR 543 595 0 249 128 0 0 chr2 44320101 44320140 -206367714 - MLT1D LTR MaLR 0 505 467 691 209 0 0 chr2 44320141 44320280 -206367574 + FLAM_C SINE Alu 2 140 -3 1817 191 113 28 chr2 44320289 44320724 -206367130 - MLT1D LTR MaLR -33 472 1 351 322 116 15 chr2 44320775 44320974 -206366880 - MLT1L LTR MaLR -8 607 389 1803 162 0 4 chr2 44321134 44321405 -206366449 - AluJo SINE Alu -38 274 5 981 220 98 11 chr2 44321440 44321763 -206366091 + LTR50 LTR ERVL 344 779 -16 860 175 29 174 chr2 44322579 44322970 -206364884 + L1ME LINE L1 5282 5537 -629 1579 196 10 10 chr2 44322970 44323261 -206364593 + AluJo SINE Alu 1 291 -21 860 175 29 174 chr2 44323261 44323321 -206364533 + L1ME LINE L1 5537 5604 -562 * 4494 167 20 28 chr2 44323288 44324331 -206363523 + L1MB4 LINE L1 5145 6179 -1 555 117 0 0 chr2 44324340 44324417 -206363437 + AluS SINE Alu 1 77 -235 507 93 0 12 chr2 44324443 44324529 -206363325 + L1MB4 LINE L1 6095 6179 -1 644 230 97 11 chr2 44324540 44324780 -206363074 + L1ME LINE L1 5593 5856 -298 565 319 71 8 chr2 44325281 44325519 -206362335 + MIR SINE MIR 10 262 0 801 227 33 70 chr2 44325601 44325874 -206361980 - LTR41 LTR ERVL -15 758 496 588 247 65 18 chr2 44325975 44326145 -206361709 - LTR41 LTR ERVL -595 178 1 575 230 32 0 chr2 44326237 44326363 -206361491 - MER94 DNA DNA 0 134 5 1145 243 3 14 chr2 44326688 44326984 -206360870 - AluY SINE Alu 0 311 19 2668 64 0 0 chr2 44327333 44327644 -206360210 - AluY SINE Alu 0 311 1 500 213 28 7 chr2 44327652 44327793 -206360061 + HsTC2 DNA Tc2 1752 1895 -3 250 341 162 0 chr2 44327814 44327993 -206359861 - L1MC/D LINE L1 -2149 5659 5452 473 141 0 0 chr2 44329164 44329235 -206358619 - AluSg/x SINE Alu -24 285 215 824 135 0 0 chr2 44329240 44329351 -206358503 - AluSq/x SINE Alu -201 111 1 333 207 110 0 chr2 44329505 44329587 -206358267 - MIR3 SINE MIR -20 188 98 628 173 79 101 chr2 44330853 44331131 -206356723 - ORSL DNA AcHobo -3 272 1 30 59 0 0 chr2 44331403 44331454 -206356400 + GC_rich Low_complexity Low_complexity 1 51 0 246 32 0 0 chr2 44331552 44331583 -206356271 + (CCCCAG)n Simple_repeat Simple_repeat 4 34 0 24 53 0 0 chr2 44332482 44332520 -206355334 + GC_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr2 44333307 44333341 -206354513 + AT_rich Low_complexity Low_complexity 1 34 0 1547 111 42 65 chr2 44333341 44333603 -206354251 + AluSx SINE Alu 6 261 -51 266 0 29 0 chr2 44333617 44333651 -206354203 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2514 56 20 0 chr2 44333655 44333957 -206353897 + AluY SINE Alu 1 308 -3 1715 166 51 13 chr2 44333995 44334369 -206353485 - L1MB8 LINE L1 -6 6172 5785 463 263 135 0 chr2 44334602 44334758 -206353096 - L3 LINE CR1 -37 1540 1364 1950 142 38 0 chr2 44335001 44335289 -206352565 + AluJb SINE Alu 1 299 -13 525 310 136 6 chr2 44335518 44335834 -206352020 + L3 LINE CR1 654 1010 -567 419 262 124 74 chr2 44335852 44336024 -206351830 + Charlie8 DNA MER1_type 1 163 -233 2076 111 50 0 chr2 44336024 44336303 -206351551 + AluSx SINE Alu 1 293 -19 419 262 124 74 chr2 44336303 44336471 -206351383 + Charlie8 DNA MER1_type 163 327 -69 188 290 48 0 chr2 44336533 44336595 -206351259 + L3 LINE CR1 1019 1083 -494 988 237 104 77 chr2 44336647 44337280 -206350574 - L1MC5 LINE L1 -44 7917 7268 409 220 17 8 chr2 44337454 44337572 -206350282 - L1MC4 LINE L1 -791 7251 7133 261 263 140 0 chr2 44337579 44337693 -206350161 - L1MC5 LINE L1 -880 7081 6952 2923 209 53 60 chr2 44337734 44337794 -206350060 - L1MB8 LINE L1 -743 5403 5344 922 173 58 0 chr2 44337794 44337950 -206349904 - FRAM SINE Alu 0 166 2 2923 209 53 60 chr2 44337950 44338056 -206349798 - L1MB8 LINE L1 -802 5344 5239 2130 129 3 0 chr2 44338056 44338343 -206349511 - AluSx SINE Alu -24 288 1 2923 209 53 60 chr2 44338343 44339048 -206348806 - L1MB8 LINE L1 -907 5239 4535 1801 112 4 12 chr2 44339048 44339297 -206348557 + AluSx SINE Alu 56 302 -10 2923 209 53 60 chr2 44339297 44339376 -206348478 - L1MB8 LINE L1 -1611 4535 4457 412 168 80 40 chr2 44339425 44339550 -206348304 - L1M4 LINE L1 -1556 4590 4461 2163 130 0 3 chr2 44339550 44339849 -206348005 - AluJb SINE Alu -14 298 1 896 253 20 63 chr2 44339850 44340245 -206347609 - L1M4 LINE L1 -2573 3573 3196 302 129 69 11 chr2 44340245 44340478 -206347376 + AluSq SINE Alu 1 302 0 189 0 0 0 chr2 44340669 44340690 -206347164 + (CTTAT)n Simple_repeat Simple_repeat 2 22 0 325 293 136 92 chr2 44340969 44341222 -206346632 + L3 LINE CR1 1186 1453 -124 763 177 0 8 chr2 44341222 44341352 -206346502 + FLAM_C SINE Alu 1 129 -4 325 293 136 92 chr2 44341352 44341371 -206346483 + L3 LINE CR1 1453 1470 -107 12046 168 13 10 chr2 44341382 44343978 -206343876 - L1 LINE L1 -1550 6015 3403 702 85 15 0 chr2 44343986 44344116 -206343738 - L1M1 LINE L1 -4028 3537 3406 1486 304 105 20 chr2 44344274 44345163 -206342691 + L2 LINE L2 2297 3269 -3 339 294 0 0 chr2 44345411 44345496 -206342358 - MER5A DNA MER1_type -2 187 103 230 261 68 23 chr2 44345434 44345522 -206342332 + MER5A DNA MER1_type 37 128 -61 * 253 329 0 0 chr2 44345562 44345638 -206342216 - MER81 DNA DNA -38 76 1 280 343 133 5 chr2 44345814 44346024 -206341830 - MIR SINE MIR -6 256 20 24 53 0 0 chr2 44346160 44346198 -206341656 + AT_rich Low_complexity Low_complexity 1 38 0 2434 100 0 0 chr2 44346320 44346630 -206341224 - AluSg SINE Alu 0 310 1 2401 90 0 7 chr2 44346782 44347081 -206340773 - AluSg SINE Alu -13 297 1 2385 93 0 3 chr2 44348334 44348636 -206339218 - AluSc SINE Alu -8 301 1 418 122 0 40 chr2 44349907 44349981 -206337873 + AluJb SINE Alu 62 132 -180 214 314 72 51 chr2 44350166 44350364 -206337490 + MIR3 SINE MIR 13 211 -51 1745 191 3 10 chr2 44351998 44352302 -206335552 - AluJo SINE Alu -10 302 1 210 71 0 0 chr2 44352488 44352516 -206335338 + (A)n Simple_repeat Simple_repeat 1 28 0 242 246 0 0 chr2 44352870 44352927 -206334927 + MIR SINE MIR 141 197 -65 1867 109 0 0 chr2 44352929 44353168 -206334686 - AluSx SINE Alu -21 291 53 6194 70 5 3 chr2 44353168 44353944 -206333910 + LTR17 LTR ERV1 3 780 0 221 246 31 46 chr2 44354060 44354125 -206333729 + MIR SINE MIR 199 262 0 771 271 64 13 chr2 44354267 44354503 -206333351 - MIR SINE MIR 0 262 15 1568 172 0 66 chr2 44354954 44355152 -206332702 - AluJb SINE Alu 0 314 143 2164 102 11 0 chr2 44355152 44355435 -206332419 + AluSg SINE Alu 5 290 -20 1568 172 0 66 chr2 44355435 44355568 -206332286 - AluJb SINE Alu -171 143 3 780 185 14 72 chr2 44356081 44356236 -206331618 - Zaphod DNA AcHobo -34 3997 3856 2150 104 0 7 chr2 44356236 44356548 -206331306 - AluSc SINE Alu 0 310 1 780 185 14 72 chr2 44356548 44356613 -206331241 - Zaphod DNA AcHobo -175 3856 3789 297 260 95 74 chr2 44356695 44356926 -206330928 + MLT1H1-int LTR MaLR 1136 1371 0 553 214 65 30 chr2 44357009 44357177 -206330677 - Zaphod DNA AcHobo -259 3772 3599 608 279 92 57 chr2 44357220 44357744 -206330110 - MLT1F LTR MaLR 0 542 1 2302 108 0 3 chr2 44358021 44358327 -206329527 + AluSx SINE Alu 3 307 -5 490 252 113 0 chr2 44358610 44358725 -206329129 - FLAM_A SINE Alu -4 129 2 2375 115 0 0 chr2 44358978 44359283 -206328571 - AluSx SINE Alu -7 305 1 270 252 81 111 chr2 44359433 44359731 -206328123 + MLT1H1-int LTR MaLR 1083 1371 0 697 259 55 61 chr2 44359733 44360085 -206327769 + MLT1H1 LTR MaLR 1 351 -239 1353 95 48 52 chr2 44360161 44360311 -206327543 + MER30 DNA MER1_type 1 151 -79 2474 105 0 0 chr2 44360311 44360624 -206327230 + AluSq SINE Alu 1 313 0 1353 95 48 52 chr2 44360624 44360704 -206327150 + MER30 DNA MER1_type 151 230 0 31 44 0 0 chr2 44360789 44360834 -206327020 + AT_rich Low_complexity Low_complexity 1 45 0 874 124 0 8 chr2 44360836 44360965 -206326889 - FLAM_C SINE Alu -5 128 1 290 115 77 0 chr2 44360971 44361023 -206326831 + MLT1H1 LTR MaLR 500 555 0 3032 196 52 59 chr2 44361023 44361882 -206325972 - Zaphod DNA AcHobo -3083 948 96 270 0 0 0 chr2 44361882 44361912 -206325942 + (TG)n Simple_repeat Simple_repeat 1 30 0 261 108 0 0 chr2 44361912 44361949 -206325905 - MER115 DNA AcHobo -656 37 1 384 265 26 3 chr2 44362095 44362213 -206325641 - MLT1K LTR MaLR 0 588 484 279 288 0 0 chr2 44363225 44363298 -206324556 + CT-rich Low_complexity Low_complexity 1 73 0 1758 149 83 4 chr2 44363371 44363647 -206324207 - AluJo SINE Alu -14 298 1 276 298 29 0 chr2 44363649 44363753 -206324101 + L1ME4a LINE L1 5818 5924 -197 342 0 0 0 chr2 44363819 44363857 -206323997 + (TA)n Simple_repeat Simple_repeat 2 39 0 1287 56 0 0 chr2 44364381 44364541 -206323313 - L1PA5 LINE L1 -1 6153 5994 348 42 42 0 chr2 44365779 44365827 -206322027 - AluY SINE Alu -11 291 242 729 148 57 0 chr2 44365853 44365975 -206321879 - FRAM SINE Alu -47 129 1 2022 61 0 12 chr2 44367800 44368072 -206319782 - AluY SINE Alu 0 307 39 1817 176 4 0 chr2 44369404 44369683 -206318171 + AluJo SINE Alu 1 280 -32 216 0 0 0 chr2 44369685 44369709 -206318145 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 329 274 63 0 chr2 44369901 44369996 -206317858 - Charlie8 DNA MER1_type -2289 128 28 1876 143 35 3 chr2 44370048 44370334 -206317520 - AluJb SINE Alu -9 303 9 313 254 30 47 chr2 44370657 44370826 -206317028 - L2 LINE L2 -809 2505 2340 260 211 11 33 chr2 44371100 44371190 -206316664 + A-rich Low_complexity Low_complexity 5 92 0 324 291 33 26 chr2 44371412 44371563 -206316291 - L1ME3A LINE L1 -222 5948 5797 583 214 8 30 chr2 44421849 44421980 -206265874 + MIR SINE MIR 31 158 -104 2603 190 14 16 chr2 44422466 44422971 -206264883 - MLT1F LTR MaLR 0 542 39 231 203 0 0 chr2 44423409 44423473 -206264381 + (TTCA)n Simple_repeat Simple_repeat 2 65 0 266 239 87 33 chr2 44423519 44423611 -206264243 - L2 LINE L2 -3 3310 3214 2372 128 0 43 chr2 44424055 44424431 -206263423 + MER1A DNA MER1_type 1 360 -169 259 93 47 0 chr2 44424607 44424650 -206263204 + MLT1L LTR MaLR 215 259 -356 831 278 86 32 chr2 44424713 44425120 -206262734 + LTR16A LTR ERVL 16 444 -6 484 324 64 10 chr2 44425137 44425341 -206262513 + MLT1J LTR MaLR 295 509 -2 494 278 82 27 chr2 44427328 44427546 -206260308 - MIR SINE MIR 0 262 42 2260 101 0 35 chr2 44428632 44428949 -206258905 + AluSx SINE Alu 1 306 -6 746 289 22 22 chr2 44429264 44429496 -206258358 + MIR SINE MIR 10 241 -21 667 113 157 0 chr2 44429708 44429823 -206258031 - FLAM_C SINE Alu 0 133 1 593 233 96 0 chr2 44430194 44430340 -206257514 + MLT1J LTR MaLR 3 162 -349 823 244 15 15 chr2 44430388 44430593 -206257261 + MIR SINE MIR 26 230 -32 663 269 116 19 chr2 44430651 44430867 -206256987 + MLT1J LTR MaLR 275 511 0 481 291 67 43 chr2 44431096 44431135 -206256719 - MIR SINE MIR 0 262 225 1471 201 74 14 chr2 44431135 44431419 -206256435 - AluJb SINE Alu -11 301 1 481 291 67 43 chr2 44431419 44431487 -206256367 - MIR SINE MIR -37 225 160 1866 131 23 45 chr2 44431487 44431839 -206256015 - MER2 DNA MER2_type 0 344 1 481 291 67 43 chr2 44431839 44431940 -206255914 - MIR SINE MIR -102 160 48 213 175 0 0 chr2 44432511 44432551 -206255303 + C-rich Low_complexity Low_complexity 5 44 0 214 308 26 13 chr2 44432838 44432916 -206254938 + L3 LINE CR1 1483 1561 -16 2336 96 3 10 chr2 44433691 44434003 -206253851 + AluSp SINE Alu 4 313 0 1933 151 0 0 chr2 44434583 44434894 -206252960 - AluSx SINE Alu -1 311 1 892 197 48 9 chr2 44434930 44435158 -206252696 - Charlie5 DNA MER1_type 0 2624 2388 2334 55 6 13 chr2 44436518 44436830 -206251024 + AluY SINE Alu 1 310 -1 213 337 40 50 chr2 44436830 44436931 -206250923 - MIR3 SINE MIR -8 200 101 781 243 54 27 chr2 44437411 44437670 -206250184 - L2 LINE L2 0 3313 3048 247 237 54 0 chr2 44437726 44437813 -206250041 - MIR3 SINE MIR -8 200 105 894 247 162 36 chr2 44437962 44438350 -206249504 + MLT1J2 LTR MaLR 14 450 0 192 333 0 0 chr2 44438456 44438510 -206249344 - MIR3 SINE MIR -37 171 118 770 281 97 40 chr2 44438599 44438950 -206248904 + MLT1K LTR MaLR 140 520 -68 2314 71 3 0 chr2 44438950 44439246 -206248608 - AluY SINE Alu -14 297 1 770 281 97 40 chr2 44439246 44439317 -206248537 + MLT1K LTR MaLR 520 586 -2 219 235 161 12 chr2 44439318 44439399 -206248455 - L2 LINE L2 -6 3307 3215 309 256 78 11 chr2 44440521 44440611 -206247243 - MLT1K LTR MaLR -339 249 154 337 297 30 0 chr2 44440612 44440713 -206247141 - MIR SINE MIR -71 191 88 312 244 0 13 chr2 44440867 44440945 -206246909 + MLT1L LTR MaLR 322 398 -217 1086 65 0 0 chr2 44441013 44441151 -206246703 - AluY SINE Alu -14 297 160 252 253 89 0 chr2 44441152 44441231 -206246623 + MLT1L LTR MaLR 507 592 -23 184 261 29 29 chr2 44441847 44441916 -206245938 - MIR3 SINE MIR -134 74 6 525 243 83 35 chr2 44441933 44442102 -206245752 + MER63A DNA MER1_type 29 205 -5 2228 108 82 18 chr2 44442499 44442841 -206245013 + THE1B LTR MaLR 1 364 0 282 313 96 100 chr2 44443264 44443494 -206244360 + L2 LINE L2 3018 3246 -26 2123 107 3 13 chr2 44443880 44444189 -206243665 + AluSx SINE Alu 1 306 -6 1595 159 74 0 chr2 44444245 44444516 -206243338 - AluJb SINE Alu -14 298 8 800 161 0 0 chr2 44444531 44444655 -206243199 - FLAM_C SINE Alu -18 125 2 313 303 148 7 chr2 44445308 44445450 -206242404 + MIR SINE MIR 35 196 -66 2308 90 0 0 chr2 44445542 44445841 -206242013 - AluSg SINE Alu -11 299 1 294 295 0 16 chr2 44446190 44446312 -206241542 + CT-rich Low_complexity Low_complexity 2 121 0 1340 75 0 0 chr2 44446512 44446685 -206241169 + AluY SINE Alu 124 296 -15 232 335 114 13 chr2 44446706 44446942 -206240912 - L1MC4a LINE L1 -1736 6072 5813 444 259 50 14 chr2 44446994 44447133 -206240721 - MIR SINE MIR -35 227 84 2187 107 0 3 chr2 44447203 44447503 -206240351 - AluSx SINE Alu -12 300 2 396 267 27 87 chr2 44448576 44448726 -206239128 - MIR SINE MIR -22 240 100 327 307 15 15 chr2 44448929 44449066 -206238788 + CT-rich Low_complexity Low_complexity 1 137 0 1611 120 47 8 chr2 44449079 44449337 -206238517 - AluJb SINE Alu -34 278 11 271 236 28 14 chr2 44453331 44453403 -206234451 + CT-rich Low_complexity Low_complexity 1 73 0 293 175 35 0 chr2 44453610 44453667 -206234187 + MER5A DNA MER1_type 131 189 0 844 205 0 67 chr2 44454100 44454203 -206233651 + MER3 DNA MER1_type 14 97 -112 2205 107 0 10 chr2 44454203 44454513 -206233341 + AluSx SINE Alu 1 307 -5 844 205 0 67 chr2 44454513 44454619 -206233235 + MER3 DNA MER1_type 97 209 0 899 216 23 6 chr2 44455258 44455429 -206232425 - MER45A DNA AcHobo -4 174 1 1198 158 15 10 chr2 44455482 44455685 -206232169 + AluJo SINE Alu 36 239 -73 393 298 24 8 chr2 44455915 44456039 -206231815 - MIR SINE MIR 0 262 137 665 186 14 21 chr2 44456048 44456188 -206231666 + L1ME2 LINE L1 6017 6155 -9 206 284 62 12 chr2 44456228 44456309 -206231545 - MIR SINE MIR -136 126 42 415 253 0 0 chr2 44456389 44456476 -206231378 + MIR SINE MIR 92 178 -84 2277 91 3 7 chr2 44456831 44457138 -206230716 + AluSp SINE Alu 1 306 -7 2222 103 7 0 chr2 44457150 44457452 -206230402 + AluSx SINE Alu 1 304 -8 736 188 8 8 chr2 44457565 44457698 -206230156 + FLAM_C SINE Alu 1 133 0 205 298 157 0 chr2 44457816 44457937 -206229917 + L2 LINE L2 3161 3300 -13 430 259 29 7 chr2 44458197 44458336 -206229518 - MIR3 SINE MIR -65 143 2 290 337 10 10 chr2 44459210 44459308 -206228546 - L2 LINE L2 0 3272 3175 738 285 100 26 chr2 44459385 44460052 -206227802 - L2 LINE L2 -23 3290 2579 199 362 61 0 chr2 44460608 44460771 -206227083 - L2 LINE L2 -942 2372 2200 2061 113 3 26 chr2 44460779 44461088 -206226766 + AluSg SINE Alu 1 302 -8 2280 101 3 0 chr2 44461975 44462282 -206225572 + AluSp SINE Alu 1 308 -5 311 324 52 7 chr2 44462652 44462788 -206225066 - L1M4 LINE L1 -2963 3183 3042 1820 201 54 13 chr2 44463001 44463390 -206224464 - MLT1F LTR MaLR -8 534 130 2085 121 0 29 chr2 44463395 44463536 -206224318 + AluSx SINE Alu 1 145 -167 2202 113 3 0 chr2 44463536 44463847 -206224007 + AluSq SINE Alu 1 312 -1 2085 121 0 29 chr2 44463847 44464018 -206223836 + AluSx SINE Alu 145 304 -8 180 0 0 0 chr2 44464532 44464552 -206223302 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 221 232 130 0 chr2 44464561 44464630 -206223224 - L2 LINE L2 -52 3220 3143 700 133 9 0 chr2 44466353 44466458 -206221396 - AluJb SINE Alu -29 283 178 1202 121 0 16 chr2 44466505 44466695 -206221159 + AluJb SINE Alu 120 306 -6 397 123 0 37 chr2 44466789 44466870 -206220984 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 741 174 9 0 chr2 44466870 44466985 -206220869 - FLAM_C SINE Alu -16 117 2 386 290 98 38 chr2 44469998 44470181 -206217673 - MIR SINE MIR -37 225 32 366 214 250 0 chr2 44470942 44471082 -206216772 + MIR SINE MIR 18 192 -70 637 276 49 6 chr2 44472009 44472172 -206215682 + MLT1J LTR MaLR 1 170 -341 956 184 41 90 chr2 44472172 44472312 -206215542 - MLT1A1 LTR MaLR 0 365 241 2160 90 10 22 chr2 44472312 44472624 -206215230 - AluSq SINE Alu -5 308 1 956 184 41 90 chr2 44472624 44472727 -206215127 - MLT1A1 LTR MaLR -124 241 134 1271 175 32 28 chr2 44472727 44472978 -206214876 - MSTB LTR MaLR 0 426 175 1419 39 0 17 chr2 44472983 44473186 -206214668 + AluY SINE Alu 105 304 0 990 169 11 11 chr2 44473187 44473364 -206214490 - MSTB LTR MaLR -249 177 1 791 131 46 0 chr2 44473366 44473496 -206214358 - MLT1A1 LTR MaLR -229 136 1 574 262 123 40 chr2 44473548 44473800 -206214054 + MLT1J LTR MaLR 239 511 0 3496 121 44 22 chr2 44473870 44474455 -206213399 + MER4B LTR ERV1 9 606 -4 795 266 174 16 chr2 44475658 44476070 -206211784 + MLT1J LTR MaLR 1 436 -14 208 279 34 89 chr2 44476174 44476411 -206211443 - L2 LINE L2 -202 3070 2847 1764 147 7 3 chr2 44476500 44476785 -206211069 - AluJo SINE Alu -15 297 12 2372 84 0 0 chr2 44476822 44477132 -206210722 + AluY SINE Alu 1 310 -1 2968 180 18 50 chr2 44477493 44478056 -206209798 - L1ME1 LINE L1 -5 6161 5626 2126 99 17 0 chr2 44478056 44478350 -206209504 - AluSp SINE Alu -14 299 1 2968 180 18 50 chr2 44478350 44478529 -206209325 - L1ME1 LINE L1 -540 5626 5443 1511 208 0 7 chr2 44478585 44478874 -206208980 - AluJo SINE Alu -25 287 1 827 164 8 0 chr2 44478885 44479019 -206208835 - AluJo SINE Alu -176 136 2 1348 132 5 0 chr2 44479028 44479240 -206208614 - AluSq SINE Alu -10 303 91 1839 201 60 35 chr2 44479243 44479464 -206208390 - L1ME1 LINE L1 -1009 5137 4923 1836 144 16 23 chr2 44479464 44479770 -206208084 - AluJb SINE Alu -8 304 1 1839 201 60 35 chr2 44479770 44480065 -206207789 - L1ME1 LINE L1 -1223 4923 4608 394 195 61 12 chr2 44480069 44480151 -206207703 - L1ME4a LINE L1 -52 6069 5984 37972 32 17 1 chr2 44480312 44486339 -206201515 + L1PA3 LINE L1 2 6153 -2 4083 198 32 5 chr2 44486412 44487284 -206200570 - L1ME1 LINE L1 -5 6161 5266 720 255 77 14 chr2 44487332 44487540 -206200314 - MIR SINE MIR -40 222 2 2051 134 0 0 chr2 44487660 44487993 -206199861 - AluSx SINE Alu 0 312 1 1375 198 74 142 chr2 44487997 44488175 -206199679 - Charlie7 DNA MER1_type -358 2254 2066 2388 94 0 3 chr2 44488175 44488483 -206199371 - AluY SINE Alu -4 307 1 1375 198 74 142 chr2 44488483 44488582 -206199272 - Charlie7 DNA MER1_type -546 2066 1962 2370 68 0 0 chr2 44488582 44488891 -206198963 - AluY SINE Alu 0 309 1 1375 198 74 142 chr2 44488891 44488992 -206198862 - Charlie7 DNA MER1_type -650 1962 1856 2313 65 0 31 chr2 44488992 44489305 -206198549 - AluY SINE Alu 0 304 1 1375 198 74 142 chr2 44489305 44489633 -206198221 - Charlie7 DNA MER1_type -756 1856 1591 259 328 26 17 chr2 44489825 44489941 -206197913 - Charlie7 DNA MER1_type -2361 251 135 279 79 0 0 chr2 44490965 44491003 -206196851 + (TG)n Simple_repeat Simple_repeat 1 38 0 449 137 0 0 chr2 44492407 44492480 -206195374 - MER53 DNA DNA -116 73 1 296 234 107 148 chr2 44492482 44492773 -206195081 - L2 LINE L2 -23 3249 2971 396 281 18 16 chr2 44493255 44493405 -206194449 + MIR SINE MIR 5 150 -67 1056 98 0 0 chr2 44494248 44494380 -206193474 - AluYb8 SINE Alu -186 132 1 1063 158 16 5 chr2 44494412 44494596 -206193258 + MLT1A2 LTR MaLR 189 374 0 2336 123 0 0 chr2 44494727 44495075 -206192779 - AluSx SINE Alu 0 348 1 207 329 108 19 chr2 44495447 44495605 -206192249 - MIR SINE MIR -43 219 48 4638 153 5 12 chr2 44497576 44498395 -206189459 - L1MB7 LINE L1 -49 6135 5323 276 328 37 15 chr2 44498396 44498530 -206189324 - AluJb SINE Alu -9 293 157 907 118 0 15 chr2 44498582 44498739 -206189115 - FLAM_C SINE Alu 0 155 1 1128 210 94 6 chr2 44498739 44499067 -206188787 - L1M4 LINE L1 -814 5332 4976 328 188 94 12 chr2 44499081 44499166 -206188688 - L1M4 LINE L1 -2982 3164 3073 2408 192 80 29 chr2 44499228 44499852 -206188002 - L1M4 LINE L1 -1142 5004 4349 1074 281 137 19 chr2 44500529 44500959 -206186895 + MLT1J LTR MaLR 1 481 -30 210 37 0 0 chr2 44500978 44501005 -206186849 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 1852 166 7 0 chr2 44501005 44501290 -206186564 - AluSx SINE Alu -22 290 1 567 327 29 11 chr2 44501318 44501590 -206186264 - L2 LINE L2 -1607 1707 1431 1178 153 0 0 chr2 44501737 44501907 -206185947 - FRAM SINE Alu -11 165 1 274 103 0 0 chr2 44501932 44501971 -206185883 + AluSx SINE Alu 1 39 -261 258 344 24 0 chr2 44502007 44502132 -206185722 + L2 LINE L2 921 1048 -2266 1649 117 42 8 chr2 44502248 44502487 -206185367 + AluSx SINE Alu 40 286 -26 2052 174 70 10 chr2 44502503 44502905 -206184949 + MSTB LTR MaLR 1 426 0 678 136 0 0 chr2 44502905 44503008 -206184846 - FLAM_C SINE Alu -29 114 12 2469 78 3 3 chr2 44503239 44503548 -206184306 - AluY SINE Alu -2 309 1 381 299 27 43 chr2 44503564 44503751 -206184103 - L1ME3A LINE L1 -204 5966 5783 350 325 179 22 chr2 44503757 44504471 -206183383 - L2 LINE L2 -2266 1048 223 788 128 0 0 chr2 44505377 44505494 -206182360 - FLAM_C SINE Alu -16 117 1 1114 237 124 34 chr2 44506082 44506551 -206181303 - MLT1J LTR MaLR 0 511 1 1331 143 12 75 chr2 44506727 44506763 -206181091 - AluJo SINE Alu -3 309 272 2143 115 10 20 chr2 44506763 44507067 -206180787 + AluSx SINE Alu 1 301 -11 1331 143 12 75 chr2 44507067 44507282 -206180572 - AluJo SINE Alu -40 272 74 28 29 0 0 chr2 44507626 44507661 -206180193 + AT_rich Low_complexity Low_complexity 1 35 0 227 295 143 0 chr2 44509914 44510026 -206177828 - MIR SINE MIR -45 217 90 357 279 7 14 chr2 44510759 44510899 -206176955 + (TG)n Simple_repeat Simple_repeat 1 139 0 528 77 0 0 chr2 44511236 44511314 -206176540 + (TC)n Simple_repeat Simple_repeat 2 79 0 1481 143 33 0 chr2 44511631 44511876 -206175978 - MLT1D LTR MaLR 0 505 253 1287 188 5 0 chr2 44511878 44512096 -206175758 + AluJb SINE Alu 87 305 -7 1184 152 36 5 chr2 44512121 44512345 -206175509 - MLT1D LTR MaLR -263 242 12 2055 194 60 12 chr2 44513742 44514222 -206173632 - MLT1D LTR MaLR -2 503 1 204 365 56 0 chr2 44514908 44515034 -206172820 + L2 LINE L2 2969 3101 -171 470 269 127 64 chr2 44515619 44515683 -206172171 + L2 LINE L2 2743 2802 -511 2026 122 0 4 chr2 44515683 44515951 -206171903 + AluSx SINE Alu 1 269 -43 225 0 0 0 chr2 44515951 44515976 -206171878 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 470 269 127 64 chr2 44515986 44516431 -206171423 + L2 LINE L2 2802 3279 -34 182 225 50 0 chr2 44516458 44516498 -206171356 - L2 LINE L2 -23 3290 3249 420 292 136 0 chr2 44516981 44517135 -206170719 + MIR SINE MIR 28 202 -60 304 245 7 122 chr2 44517300 44517372 -206170482 - MER5B DNA MER1_type -55 123 73 2234 111 3 19 chr2 44517372 44517688 -206170166 - AluSx SINE Alu -1 311 1 304 245 7 122 chr2 44517688 44517754 -206170100 - MER5B DNA MER1_type -105 73 1 240 247 25 12 chr2 44518667 44518748 -206169106 + MER5B DNA MER1_type 9 90 -88 1719 198 104 11 chr2 44519107 44519567 -206168287 + MLT1D LTR MaLR 2 504 -1 262 206 0 29 chr2 44519985 44520053 -206167801 + L2 LINE L2 2990 3055 -217 608 131 31 46 chr2 44520142 44520272 -206167582 + Tigger7 DNA MER2_type 2243 2370 -121 1563 184 61 0 chr2 44520533 44520811 -206167043 + Tigger7 DNA MER2_type 154 448 -285 346 154 9 118 chr2 44520813 44520857 -206166997 + L1ME4a LINE L1 5787 5834 -287 1767 187 0 9 chr2 44520857 44521172 -206166682 + AluJb SINE Alu 1 312 0 346 154 9 118 chr2 44521172 44521237 -206166617 + L1ME4a LINE L1 5834 5884 -237 1451 132 28 24 chr2 44521284 44521535 -206166319 + Tigger7 DNA MER2_type 2238 2489 -2 855 260 128 57 chr2 44521572 44521651 -206166203 + L1ME4a LINE L1 5589 5661 -460 2419 83 3 25 chr2 44521651 44521965 -206165889 + AluSp SINE Alu 1 307 -6 855 260 128 57 chr2 44521965 44522362 -206165492 + L1ME4a LINE L1 5661 6099 -22 1840 140 62 4 chr2 44523016 44523288 -206164566 + AluSx SINE Alu 1 288 -24 2204 114 13 3 chr2 44523686 44523992 -206163862 - AluSp SINE Alu -4 309 1 597 298 57 20 chr2 44524005 44524304 -206163550 - L1ME4a LINE L1 -197 5924 5615 365 302 81 12 chr2 44526024 44526196 -206161658 + L2 LINE L2 2397 2580 -734 2370 119 0 0 chr2 44526810 44527122 -206160732 - AluSx SINE Alu 0 312 1 204 146 24 0 chr2 44527187 44527228 -206160626 + (TG)n Simple_repeat Simple_repeat 1 42 0 213 327 180 0 chr2 44527442 44527592 -206160262 - MIR3 SINE MIR -2 206 30 231 346 39 0 chr2 44528330 44528486 -206159368 - L2 LINE L2 -213 3059 2898 2353 93 0 0 chr2 44528517 44528836 -206159018 + AluSx SINE Alu 1 319 0 1532 154 33 55 chr2 44530822 44531095 -206156759 - AluJo SINE Alu -8 304 38 382 245 47 9 chr2 44531218 44531324 -206156530 - MER103 DNA DNA -55 111 2 1834 154 0 69 chr2 44531341 44531506 -206156348 - AluSx SINE Alu -16 296 162 351 0 0 0 chr2 44531506 44531545 -206156309 + (TA)n Simple_repeat Simple_repeat 1 39 0 1834 154 0 69 chr2 44531545 44531697 -206156157 - AluSx SINE Alu -150 162 1 200 284 45 0 chr2 44532030 44532097 -206155757 + MIR SINE MIR 67 136 -72 317 203 0 0 chr2 44532438 44532497 -206155357 - L2 LINE L2 0 3313 3255 729 33 0 0 chr2 44532783 44532875 -206154979 + (TC)n Simple_repeat Simple_repeat 1 92 0 1265 125 15 0 chr2 44533155 44533355 -206154499 - L1PB3 LINE L1 0 6154 5952 2569 75 0 0 chr2 44534066 44534372 -206153482 - AluSx SINE Alu -6 306 1 2226 102 27 0 chr2 44534487 44534781 -206153073 - AluSq SINE Alu -11 302 1 270 276 49 16 chr2 44535006 44535129 -206152725 - MER117 DNA MER1_type -18 179 53 319 265 11 34 chr2 44535147 44535249 -206152605 - MIR3 SINE MIR -29 179 81 190 301 112 21 chr2 44535777 44535920 -206151934 + L2 LINE L2 2933 3088 -184 215 209 0 0 chr2 44536539 44536582 -206151272 + G-rich Low_complexity Low_complexity 2 44 0 206 347 53 0 chr2 44537010 44537105 -206150749 + MIR SINE MIR 30 129 -79 231 270 30 40 chr2 44537506 44537606 -206150248 + MIR SINE MIR 163 261 -1 1650 181 30 3 chr2 44537696 44538000 -206149854 + AluJo SINE Alu 1 312 0 1376 239 79 75 chr2 44538090 44538633 -206149221 - MLT1H LTR MaLR 0 549 5 214 290 65 0 chr2 44538769 44538831 -206149023 - L3 LINE CR1 -17 1560 1495 317 321 131 18 chr2 44538851 44539072 -206148782 - L3 LINE CR1 -251 1326 1081 1214 218 135 16 chr2 44539372 44539749 -206148105 - L1ME3 LINE L1 0 6162 5741 959 234 119 18 chr2 44539748 44540026 -206147828 + L1ME LINE L1 5416 5721 -441 * 466 316 58 0 chr2 44540096 44540270 -206147584 - L1ME3 LINE L1 -402 5719 5536 998 215 117 49 chr2 44541688 44542097 -206145757 - LTR16A1 LTR ERVL -17 440 4 283 241 7 0 chr2 44542783 44542848 -206145006 - MER91 DNA MER1_type -3 187 127 199 253 30 111 chr2 44543616 44543715 -206144139 - MER5B DNA MER1_type -87 91 1 793 288 56 0 chr2 44545118 44545333 -206142521 - MIR SINE MIR -31 231 5 1523 263 101 21 chr2 44545419 44545884 -206141970 - MLT1G1 LTR MaLR 0 595 67 2462 73 0 6 chr2 44545884 44546199 -206141655 + AluSp SINE Alu 1 313 0 1523 263 101 21 chr2 44546199 44546272 -206141582 - MLT1G1 LTR MaLR -528 67 1 428 292 88 12 chr2 44546374 44546545 -206141309 - MIR SINE MIR -10 252 69 5721 166 91 64 chr2 44546950 44547712 -206140142 - L1MC3 LINE L1 0 7995 7254 2058 103 0 3 chr2 44547712 44547994 -206139860 - AluSg SINE Alu -16 294 14 5721 166 91 64 chr2 44547994 44548460 -206139394 - L1MC3 LINE L1 -741 7254 6802 10577 28 6 111 chr2 44548469 44550017 -206137837 - SVA Other Other 0 1386 1 341 45 0 90 chr2 44550017 44550074 -206137780 - AluSp/q SINE Alu -8 295 243 5721 166 91 64 chr2 44550074 44550636 -206137218 - L1MC3 LINE L1 -1193 6802 6000 373 320 7 47 chr2 44550678 44550847 -206137007 - MIR SINE MIR -46 216 56 553 311 40 0 chr2 44550981 44551129 -206136725 + MIR3 SINE MIR 43 196 -12 236 250 115 40 chr2 44551413 44551561 -206136293 - MER112 DNA MER1_type -60 200 42 427 291 36 37 chr2 44551596 44551796 -206136058 - MIR SINE MIR -44 164 11 369 309 133 54 chr2 44552741 44552823 -206135031 + L2 LINE L2 2997 3071 -242 2302 86 7 0 chr2 44552823 44553127 -206134727 - AluSx SINE Alu -6 306 1 369 309 133 54 chr2 44553127 44553312 -206134542 + L2 LINE L2 3071 3291 -22 198 103 0 0 chr2 44553312 44553341 -206134513 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 369 309 133 54 chr2 44553341 44553366 -206134488 + L2 LINE L2 3291 3313 0 2148 132 0 0 chr2 44554100 44554411 -206133443 + AluSx SINE Alu 1 311 -1 1725 210 69 15 chr2 44554411 44554891 -206132963 - L1ME3A LINE L1 -301 5869 5364 335 252 153 9 chr2 44555118 44555229 -206132625 + MIR SINE MIR 63 189 -73 1105 214 9 18 chr2 44556245 44556469 -206131385 - MER58A DNA MER1_type -2 222 1 1784 321 27 31 chr2 44556479 44557117 -206130737 + MER110-int LTR ERV1 2021 2655 -1992 2185 104 7 0 chr2 44557172 44557479 -206130375 - AluY SINE Alu -2 309 1 319 236 11 45 chr2 44558488 44558577 -206129277 - MIR3 SINE MIR -13 195 110 200 320 26 51 chr2 44558699 44558855 -206128999 - L2 LINE L2 -1 3312 3161 526 221 27 34 chr2 44559748 44559897 -206127957 - MARNA DNA Mariner -128 458 311 278 360 86 0 chr2 44559938 44560077 -206127777 - L2 LINE L2 -8 3305 3155 821 256 52 28 chr2 44560238 44560488 -206127366 - MIR SINE MIR 0 262 7 427 295 13 13 chr2 44560590 44560739 -206127115 + L1ME LINE L1 5538 5686 -435 347 253 11 0 chr2 44560743 44560830 -206127024 + L1ME LINE L1 5732 5819 -302 210 250 0 0 chr2 44561403 44561447 -206126407 + (TG)n Simple_repeat Simple_repeat 1 44 0 1782 72 5 0 chr2 44561592 44561815 -206126039 + AluSp SINE Alu 2 225 -88 841 81 0 0 chr2 44561815 44561926 -206125928 + AluSp/q SINE Alu 188 298 -15 181 243 0 100 chr2 44562151 44562221 -206125633 - MIR3 SINE MIR -12 196 134 427 333 85 38 chr2 44564333 44564861 -206122993 + L2 LINE L2 2422 2974 -340 206 175 0 0 chr2 44565394 44565434 -206122420 - L2 LINE L2 -1 3312 3273 1565 154 0 19 chr2 44565434 44565700 -206122154 + AluJo SINE Alu 15 275 -37 289 267 43 52 chr2 44565783 44565899 -206121955 - L2 LINE L2 -225 3047 2933 200 289 39 58 chr2 44565900 44566004 -206121850 + MIR SINE MIR 91 192 -70 257 200 0 0 chr2 44566145 44566185 -206121669 + MER4B LTR ERV1 499 538 -72 213 39 0 0 chr2 44566186 44566212 -206121642 + (A)n Simple_repeat Simple_repeat 1 26 0 187 302 0 16 chr2 44566424 44566487 -206121367 + L2 LINE L2 3250 3311 -2 342 0 0 0 chr2 44567240 44567278 -206120576 + (GA)n Simple_repeat Simple_repeat 2 39 0 255 61 0 0 chr2 44569809 44569842 -206118012 + (TG)n Simple_repeat Simple_repeat 1 33 0 2424 68 0 3 chr2 44572593 44572904 -206114950 - AluSx SINE Alu 0 312 3 191 214 83 48 chr2 44573445 44573529 -206114325 - MER5A DNA MER1_type -76 113 27 542 237 135 0 chr2 44575051 44575136 -206112718 - MER5A DNA MER1_type -12 177 105 1525 181 3 72 chr2 44575136 44575467 -206112387 - AluJo SINE Alu -4 308 1 542 237 135 0 chr2 44575467 44575537 -206112317 - MER5A DNA MER1_type -84 105 1 368 282 61 49 chr2 44575537 44575655 -206112199 - MIR3 SINE MIR -56 152 33 1463 68 5 0 chr2 44577114 44577304 -206110550 - L1PA14 LINE L1 0 6161 5971 923 108 15 0 chr2 44577403 44577533 -206110321 + AluSq/x SINE Alu 1 132 -181 21 0 0 0 chr2 44578053 44578074 -206109780 + GC_rich Low_complexity Low_complexity 1 21 0 550 266 37 58 chr2 44578251 44578439 -206109415 - MIR SINE MIR -9 253 70 239 182 0 0 chr2 44578454 44578498 -206109356 + L2 LINE L2 3268 3311 -2 2080 114 10 0 chr2 44579191 44579488 -206108366 + AluSx SINE Alu 1 300 -12 641 350 110 6 chr2 44582062 44582408 -206105446 + L3 LINE CR1 623 1004 -573 313 248 25 96 chr2 44582428 44582490 -206105364 + MER5A DNA MER1_type 16 81 -108 2749 10 0 0 chr2 44582490 44582797 -206105057 + AluYa5 SINE Alu 1 307 -4 313 248 25 96 chr2 44582797 44582891 -206104963 + MER5A DNA MER1_type 81 161 -28 346 252 187 22 chr2 44583292 44583431 -206104423 + MIR SINE MIR 84 245 -17 192 245 19 19 chr2 44583399 44583452 -206104402 + L2 LINE L2 3219 3271 -1 * 195 162 0 0 chr2 44583471 44583508 -206104346 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 266 300 171 35 chr2 44583921 44584178 -206103676 - L2 LINE L2 -86 3186 2895 286 200 227 0 chr2 44585075 44585150 -206102704 + L2 LINE L2 3208 3299 -14 192 40 0 0 chr2 44585152 44585177 -206102677 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 230 227 0 30 chr2 44585184 44585250 -206102604 + (CATA)n Simple_repeat Simple_repeat 1 64 0 314 246 61 35 chr2 44585851 44585965 -206101889 + MIR SINE MIR 14 130 -132 1941 156 7 0 chr2 44586093 44586401 -206101453 - AluJb SINE Alu -26 286 1 2245 104 7 0 chr2 44586615 44586903 -206100951 + AluSx SINE Alu 1 290 -22 1870 236 59 17 chr2 44586908 44587437 -206100417 + L1ME3 LINE L1 5596 6146 -16 259 402 27 0 chr2 44588757 44588869 -206098985 - MIR SINE MIR -92 170 56 233 163 0 0 chr2 44588870 44588919 -206098935 + MER41A LTR ERV1 147 195 -359 323 232 66 67 chr2 44589013 44589168 -206098686 + MIR SINE MIR 8 161 -47 2327 75 7 20 chr2 44589619 44589925 -206097929 + AluY SINE Alu 1 302 -9 595 281 121 22 chr2 44590648 44590872 -206096982 - MIR SINE MIR -5 257 12 251 261 79 44 chr2 44591452 44591611 -206096243 - MIR SINE MIR -20 188 25 197 299 51 51 chr2 44593319 44593436 -206094418 - MIR3 SINE MIR -32 176 60 1697 198 82 86 chr2 44594202 44594827 -206093027 - MLT1E2 LTR MaLR 0 626 5 210 71 0 0 chr2 44594988 44595016 -206092838 + (TCC)n Simple_repeat Simple_repeat 2 29 0 237 303 10 40 chr2 44595330 44595429 -206092425 + L2 LINE L2 3164 3259 -13 2204 112 27 0 chr2 44595808 44596103 -206091751 - AluSx SINE Alu -9 303 1 886 253 78 20 chr2 44596871 44597164 -206090690 - L1ME3 LINE L1 -10 6152 5843 224 279 151 12 chr2 44597259 44597345 -206090509 - MIR SINE MIR -118 144 47 347 206 0 0 chr2 44597654 44597717 -206090137 - L2 LINE L2 0 3313 3251 629 258 62 147 chr2 44597721 44598257 -206089597 - MLT1H1 LTR MaLR -2 553 64 357 300 0 39 chr2 44598469 44598599 -206089255 - MIR SINE MIR -5 257 133 979 270 80 68 chr2 44598599 44598923 -206088931 - MLT1H1 LTR MaLR -3 549 231 2319 97 0 13 chr2 44598923 44599221 -206088633 - AluSq SINE Alu -19 294 1 979 270 80 68 chr2 44599221 44599446 -206088408 - MLT1H1 LTR MaLR -321 231 10 445 275 29 177 chr2 44599456 44599707 -206088147 - MLT1G1-int LTR MaLR 0 1371 1084 2293 122 0 0 chr2 44599707 44600011 -206087843 + AluSq SINE Alu 1 304 -9 445 275 29 177 chr2 44600011 44600287 -206087567 - MLT1G1-int LTR MaLR -287 1084 977 2165 103 57 17 chr2 44600287 44600637 -206087217 + THE1B LTR MaLR 1 364 0 445 275 29 177 chr2 44600637 44600831 -206087023 - MLT1G1-int LTR MaLR -394 977 756 781 96 0 0 chr2 44600989 44601093 -206086761 - U6 snRNA snRNA -3 104 1 2251 130 0 0 chr2 44601494 44601802 -206086052 - AluSx SINE Alu -4 308 1 282 290 79 19 chr2 44601802 44602067 -206085787 - MLT1G1-int LTR MaLR -946 425 10 1089 234 112 59 chr2 44602084 44602576 -206085278 - MLT1G1 LTR MaLR -5 590 73 467 289 8 8 chr2 44602592 44602713 -206085141 - MIR SINE MIR -140 122 2 2282 122 3 3 chr2 44603114 44603426 -206084428 - AluSx SINE Alu 0 312 1 541 286 0 37 chr2 44603738 44603899 -206083955 + MER91A DNA MER1_type 2 156 -40 1361 206 3 7 chr2 44654616 44654922 -206032932 - AluSq SINE Alu -8 305 1 2096 98 10 10 chr2 44654982 44655288 -206032566 - AluSq SINE Alu -7 306 1 1737 162 80 24 chr2 44655410 44655749 -206032105 - MER46B DNA MER2_type -3 233 1 4861 78 42 9 chr2 44656048 44656719 -206031135 - SVA Other Other 0 1386 694 1907 174 3 0 chr2 44657032 44657342 -206030512 + MER47B DNA MER2_type 104 414 -4 198 0 0 0 chr2 44657342 44657364 -206030490 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 261 0 0 0 chr2 44657363 44657392 -206030462 + (GA)n Simple_repeat Simple_repeat 1 29 0 1388 178 41 85 chr2 44657394 44657760 -206030094 - MLT2D LTR ERVL -64 350 1 886 209 59 19 chr2 44657895 44658230 -206029624 - MLT1H1 LTR MaLR 0 555 217 2123 47 0 4 chr2 44658640 44658897 -206028957 - AluY SINE Alu -24 287 32 198 0 0 0 chr2 44659543 44659565 -206028289 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 225 0 0 0 chr2 44659564 44659589 -206028265 + (CA)n Simple_repeat Simple_repeat 1 25 0 1911 92 78 18 chr2 44662069 44662352 -206025502 + AluSp SINE Alu 3 302 -11 462 280 104 21 chr2 44662354 44662547 -206025307 - MIR SINE MIR -10 252 44 2083 123 0 16 chr2 44662958 44663274 -206024580 + AluSp SINE Alu 2 312 -1 2202 103 0 31 chr2 44663310 44663631 -206024223 - AluY SINE Alu 0 311 1 256 322 83 0 chr2 44663747 44663868 -206023986 - MIR3 SINE MIR -65 143 13 2133 121 0 7 chr2 44663985 44664290 -206023564 + AluSq SINE Alu 1 303 -10 312 27 0 0 chr2 44665140 44665177 -206022677 + (CA)n Simple_repeat Simple_repeat 2 38 0 192 279 108 27 chr2 44666094 44666205 -206021649 + L2 LINE L2 3190 3309 -4 263 342 96 33 chr2 44666318 44666410 -206021444 + L2 LINE L2 2543 2628 -686 2232 95 3 0 chr2 44666410 44666706 -206021148 - AluSc SINE Alu -12 297 1 263 342 96 33 chr2 44666706 44666885 -206020969 + L2 LINE L2 2628 2831 -483 273 216 176 0 chr2 44666977 44667051 -206020803 + MIR SINE MIR 109 195 -67 1735 151 22 0 chr2 44667055 44667370 -206020484 - AluJb SINE Alu 0 321 1 363 185 0 0 chr2 44667397 44667462 -206020392 - MER2 DNA MER2_type 0 345 281 2086 122 0 10 chr2 44667898 44668229 -206019625 + AluSq SINE Alu 1 313 0 2099 116 6 31 chr2 44669915 44670235 -206017619 - AluSx SINE Alu 0 312 1 771 111 4 217 chr2 44672687 44672717 -206015137 - MER2 DNA MER2_type -139 206 171 1593 192 0 7 chr2 44672717 44673019 -206014835 + AluJo SINE Alu 3 302 -10 771 111 4 217 chr2 44673019 44673223 -206014631 - MER2 DNA MER2_type -174 171 22 226 288 76 17 chr2 44673510 44673628 -206014226 + L2 LINE L2 2970 3094 -178 677 258 48 5 chr2 44674860 44675046 -206012808 + MIR SINE MIR 18 211 -51 2080 108 0 40 chr2 44675063 44675388 -206012466 - AluSx SINE Alu 0 312 1 182 156 22 0 chr2 44675510 44675555 -206012299 + C-rich Low_complexity Low_complexity 3 48 0 440 330 45 0 chr2 44675903 44676082 -206011772 + MIR SINE MIR 40 226 -36 216 250 19 0 chr2 44676111 44676163 -206011691 + C-rich Low_complexity Low_complexity 1 53 0 192 339 34 42 chr2 44676371 44676489 -206011365 + MIR SINE MIR 21 137 -71 * 636 310 131 32 chr2 44676479 44677377 -206010477 - L2 LINE L2 0 3272 2296 824 204 0 0 chr2 44677556 44677708 -206010146 + FRAM SINE Alu 25 176 0 2131 101 3 13 chr2 44677743 44678049 -206009805 + AluSx SINE Alu 2 304 -8 206 345 0 0 chr2 44678052 44678107 -206009747 - MIR3 SINE MIR -45 163 109 220 312 86 21 chr2 44678452 44678545 -206009309 + MIR SINE MIR 13 111 -151 1472 128 4 8 chr2 44678559 44678794 -206009060 - AluSg/x SINE Alu -1 311 78 1623 76 9 0 chr2 44678809 44679020 -206008834 + AluSp SINE Alu 82 294 -19 851 194 40 23 chr2 44679156 44679331 -206008523 - MER3 DNA MER1_type -78 131 1 373 314 16 0 chr2 44680393 44680517 -206007337 - MIR SINE MIR -91 171 46 2182 93 10 6 chr2 44680607 44680918 -206006936 - AluSx SINE Alu 0 312 1 831 109 47 0 chr2 44681411 44681539 -206006315 - AluJo SINE Alu -178 134 1 260 216 14 0 chr2 44681937 44682011 -206005843 + (TG)n Simple_repeat Simple_repeat 1 75 0 2144 107 3 0 chr2 44682842 44683140 -206004714 + AluSx SINE Alu 1 299 -13 222 323 90 75 chr2 44683141 44683342 -206004512 - MIR SINE MIR -3 259 56 446 324 22 5 chr2 44683596 44683781 -206004073 + MIR SINE MIR 64 251 -11 241 231 202 29 chr2 44683825 44683929 -206003925 - MIR SINE MIR -58 150 29 1278 120 6 0 chr2 44684535 44684718 -206003136 - AluSx SINE Alu -116 196 13 2401 88 0 0 chr2 44685358 44685664 -206002190 + AluSx SINE Alu 1 306 -6 184 107 0 0 chr2 44685869 44685897 -206001957 - L2 LINE L2 -94 3219 3192 263 276 129 26 chr2 44685985 44686101 -206001753 + L2 LINE L2 2523 2650 -664 * 338 258 153 0 chr2 44686078 44686202 -206001652 + L2 LINE L2 2904 3046 -267 399 265 110 6 chr2 44686667 44686982 -206000872 + MLT1J2 LTR MaLR 5 382 -68 193 263 92 13 chr2 44687261 44687337 -206000517 + MIR SINE MIR 82 163 -99 305 230 0 90 chr2 44687406 44687506 -206000348 - MIR SINE MIR -105 157 67 870 315 54 41 chr2 44687513 44688395 -205999459 + L2 LINE L2 2371 3272 0 1244 171 55 126 chr2 44688457 44688583 -205999271 - MLT1B LTR MaLR 0 390 257 1982 107 17 17 chr2 44688583 44688874 -205998980 + AluSx SINE Alu 11 301 -11 1244 171 55 126 chr2 44688874 44689055 -205998799 - MLT1B LTR MaLR -133 257 118 2145 143 10 0 chr2 44689055 44689363 -205998491 - AluSx SINE Alu -1 311 1 1244 171 55 126 chr2 44689363 44689474 -205998380 - MLT1B LTR MaLR -272 118 1 2104 173 51 15 chr2 44689475 44689837 -205998017 - MLT1B-int LTR MaLR -1 1370 990 1989 130 0 25 chr2 44689837 44690121 -205997733 + AluJb SINE Alu 23 299 -13 2104 173 51 15 chr2 44690121 44690169 -205997685 - MLT1B-int LTR MaLR -381 990 945 394 214 0 12 chr2 44690308 44690392 -205997462 - MLT1B-int LTR MaLR -975 760 678 3861 153 45 14 chr2 44690449 44691221 -205996633 - MLT1-int LTR MaLR -484 887 1 336 115 0 0 chr2 44691221 44691273 -205996581 - MLT2B1 LTR ERVL 0 520 469 372 167 0 28 chr2 44691292 44691364 -205996490 + Tigger5 DNA MER2_type 7 76 -2247 1034 92 35 0 chr2 44691538 44691679 -205996175 - AluSg/x SINE Alu -14 296 151 432 67 89 100 chr2 44691754 44691844 -205996010 - MIR SINE MIR -89 173 85 693 178 46 33 chr2 44692233 44692385 -205995469 - MER5A DNA MER1_type -35 154 1 395 312 16 0 chr2 44692416 44692541 -205995313 - MER5B DNA MER1_type -49 129 3 225 314 71 50 chr2 44692805 44692945 -205994909 - L2 LINE L2 -30 3242 3100 268 280 193 7 chr2 44693040 44693190 -205994664 - MER5B DNA MER1_type 0 178 1 530 182 0 0 chr2 44693470 44693558 -205994296 - FLAM_A SINE Alu -51 91 4 985 200 0 0 chr2 44694165 44694335 -205993519 + FAM SINE Alu 1 170 -5 28 29 0 0 chr2 44694956 44694991 -205992863 + AT_rich Low_complexity Low_complexity 1 35 0 517 173 18 27 chr2 44695252 44695362 -205992492 - MER5A DNA MER1_type -69 120 12 2432 87 0 0 chr2 44696068 44696366 -205991488 - AluSx SINE Alu -14 298 1 195 39 176 0 chr2 44697277 44697328 -205990526 + CT-rich Low_complexity Low_complexity 1 60 0 * 283 117 0 33 chr2 44697325 44697385 -205990469 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1515 148 19 98 chr2 44697389 44697707 -205990147 - AluJb SINE Alu -19 293 1 2667 271 39 30 chr2 44698423 44699469 -205988385 + L1ME LINE L1 36 1091 -5305 708 167 9 0 chr2 44699470 44699584 -205988270 + FLAM_C SINE Alu 2 116 -27 441 285 89 9 chr2 44699597 44699811 -205988043 + L1ME LINE L1 1077 1307 -5089 1913 179 10 0 chr2 44699818 44700126 -205987728 + AluJo SINE Alu 1 311 -1 1505 220 44 50 chr2 44700126 44700621 -205987233 + L1ME LINE L1 4981 5472 -743 1150 165 102 8 chr2 44700646 44700900 -205986954 + L1ME LINE L1 5606 5883 -352 4338 196 53 22 chr2 44700911 44701593 -205986261 + L1MB7 LINE L1 3858 4517 -1667 207 0 0 0 chr2 44701593 44701616 -205986238 + (TCCC)n Simple_repeat Simple_repeat 4 26 0 4338 196 53 22 chr2 44701616 44702290 -205985564 + L1MB7 LINE L1 4517 5169 -1015 2395 93 3 0 chr2 44702290 44702591 -205985263 + AluSq SINE Alu 1 302 -11 4338 196 53 22 chr2 44702591 44703195 -205984659 + L1MB7 LINE L1 5169 5944 -240 339 123 4 0 chr2 44703295 44703358 -205984496 + Alu SINE Alu 1 46 -254 2362 98 3 0 chr2 44703953 44704249 -205983605 - AluSx SINE Alu -15 297 1 1494 169 44 44 chr2 44704314 44704610 -205983244 - AluJb SINE Alu -16 296 1 482 134 71 49 chr2 44705558 44705578 -205982276 - L1MC3 LINE L1 0 7785 7767 1962 154 34 3 chr2 44705578 44705876 -205981978 + AluJb SINE Alu 2 308 -4 482 134 71 49 chr2 44705876 44706347 -205981507 - L1MC3 LINE L1 -18 7767 7307 2402 101 0 0 chr2 44706347 44706645 -205981209 - AluSx SINE Alu -10 302 5 482 134 71 49 chr2 44706645 44706822 -205981032 - L1MC3 LINE L1 -478 7307 5661 2015 142 0 10 chr2 44706823 44707118 -205980736 - AluJb SINE Alu 0 312 21 323 301 71 19 chr2 44707204 44707358 -205980496 + MIR SINE MIR 22 146 -62 1966 102 25 74 chr2 44708145 44708469 -205979385 + AluSg SINE Alu 1 308 -2 1815 145 6 81 chr2 44708682 44709014 -205978840 - AluSx SINE Alu -5 307 1 1938 143 0 17 chr2 44709149 44709473 -205978381 - AluJb SINE Alu 0 319 1 185 211 58 0 chr2 44709607 44709659 -205978195 - MIR SINE MIR -126 136 82 2278 116 0 19 chr2 44710553 44710871 -205976983 + AluSx SINE Alu 1 312 0 244 265 165 35 chr2 44711518 44711688 -205976166 - L2 LINE L2 -91 3222 3031 2367 101 0 0 chr2 44711789 44712087 -205975767 + AluSx SINE Alu 1 298 -14 926 121 0 0 chr2 44712090 44712214 -205975640 - AluJo/FLAM SINE Alu -188 124 1 2388 96 0 3 chr2 44713427 44713729 -205974125 - AluSq SINE Alu -12 301 1 339 239 94 14 chr2 44714097 44714235 -205973619 + MIR3 SINE MIR 42 190 -18 319 175 181 175 chr2 44714477 44714600 -205973254 + MER45A DNA AcHobo 1 127 -1454 2305 118 0 0 chr2 44714600 44714905 -205972949 - AluSx SINE Alu 0 312 8 319 175 181 175 chr2 44714905 44714958 -205972896 + MER45A DNA AcHobo 127 178 0 1849 204 0 0 chr2 44716092 44716401 -205971453 - AluJo SINE Alu -2 310 2 2016 108 51 0 chr2 44716409 44716704 -205971150 - AluSx SINE Alu -2 310 1 2292 88 3 0 chr2 44717637 44717951 -205969903 - AluSx SINE Alu 0 315 1 2453 100 0 0 chr2 44718692 44719001 -205968853 + AluSx SINE Alu 2 310 -2 736 220 95 15 chr2 44720717 44720917 -205966937 - MER20 DNA MER1_type 0 219 4 725 281 113 30 chr2 44720918 44721281 -205966573 - LTR33 LTR ERVL -96 425 33 1944 168 10 3 chr2 44721375 44721679 -205966175 + AluJb SINE Alu 1 306 -6 360 261 45 60 chr2 44721695 44721829 -205966025 + MIR SINE MIR 33 164 -98 519 282 29 65 chr2 44722323 44722568 -205965286 - MER102b DNA MER1_type 0 341 106 1874 160 13 3 chr2 44722776 44723076 -205964778 + AluJb SINE Alu 2 304 -8 195 129 0 0 chr2 44724285 44724316 -205963538 + (TGGG)n Simple_repeat Simple_repeat 2 32 0 2332 177 35 11 chr2 44725367 44725985 -205961869 - L1MB7 LINE L1 -357 5827 5114 189 107 0 0 chr2 44725985 44726013 -205961841 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 2509 96 0 3 chr2 44726015 44726328 -205961526 - AluSx SINE Alu 0 312 1 490 194 0 0 chr2 44726341 44726444 -205961410 - L1MB7 LINE L1 -1016 5130 5028 2341 80 7 10 chr2 44726465 44726764 -205961090 + AluSg SINE Alu 1 298 -12 2091 129 26 0 chr2 44726882 44727184 -205960670 + AluSx SINE Alu 1 310 -2 2214 101 3 35 chr2 44727189 44727505 -205960349 + AluSq SINE Alu 7 312 -1 1809 164 0 32 chr2 44727509 44727821 -205960033 + AluJb SINE Alu 1 302 -10 340 299 45 15 chr2 44727980 44728114 -205959740 + MIR SINE MIR 117 254 -8 1916 97 4 0 chr2 44728204 44728441 -205959413 + AluSx SINE Alu 2 239 -73 300 306 34 2 chr2 44729429 44729549 -205958305 - MIR SINE MIR -71 137 29 860 244 152 11 chr2 44729618 44729901 -205957953 + MER58B DNA MER1_type 19 341 0 405 276 86 52 chr2 44730381 44730418 -205957436 - MER91A DNA MER1_type -13 183 149 2408 103 0 3 chr2 44730418 44730728 -205957126 + AluSx SINE Alu 1 309 -3 405 276 86 52 chr2 44730728 44730864 -205956990 - MER91A DNA MER1_type -47 149 4 346 217 0 0 chr2 44731326 44731395 -205956459 - MER5A DNA MER1_type -80 109 41 1788 134 57 11 chr2 44732761 44733044 -205954810 - AluJb SINE Alu -16 296 1 2208 101 0 20 chr2 44733331 44733629 -205954225 - AluSg SINE Alu -13 297 6 242 282 24 0 chr2 44734161 44734246 -205953608 + L2 LINE L2 2967 3053 -219 2319 101 7 0 chr2 44734271 44734567 -205953287 + AluSx SINE Alu 1 298 -14 1266 117 0 11 chr2 44734568 44734748 -205953106 + AluSg/x SINE Alu 135 312 0 282 277 84 34 chr2 44734779 44734898 -205952956 - MIR SINE MIR -21 241 117 2058 102 33 0 chr2 44734898 44735216 -205952638 + AluSx SINE Alu 1 327 0 518 220 30 0 chr2 44735238 44735338 -205952516 + MER81 DNA DNA 11 113 -1 190 188 0 188 chr2 44735848 44735889 -205951965 - MIR SINE MIR -109 153 134 2421 72 6 37 chr2 44735889 44736210 -205951644 + AluY SINE Alu 1 311 0 190 188 0 188 chr2 44736210 44736253 -205951601 - MIR SINE MIR -128 134 85 262 270 86 29 chr2 44736664 44736838 -205951016 + L2 LINE L2 2870 3053 -219 709 252 44 34 chr2 44736877 44737083 -205950771 - MIR SINE MIR -21 241 34 2249 121 0 19 chr2 44737297 44737610 -205950244 + AluSg SINE Alu 1 307 -3 561 245 29 0 chr2 44738792 44738931 -205948923 - MIR SINE MIR -70 192 50 429 237 92 26 chr2 44740170 44740322 -205947532 - MIR SINE MIR -40 222 61 720 35 0 0 chr2 44740446 44740533 -205947321 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 2427 80 0 20 chr2 44740729 44741029 -205946825 - AluSg SINE Alu -15 295 2 236 30 30 0 chr2 44741061 44741094 -205946760 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2088 132 26 0 chr2 44741096 44741399 -205946455 - AluSx SINE Alu -1 311 1 358 287 149 11 chr2 44741712 44741886 -205945968 + MIR SINE MIR 28 225 -37 458 285 31 8 chr2 44742780 44742910 -205944944 + L2 LINE L2 3181 3313 0 198 118 0 0 chr2 44742912 44742946 -205944908 + (CA)n Simple_repeat Simple_repeat 1 34 0 215 289 26 0 chr2 44743756 44743912 -205943942 + (CAGA)n Simple_repeat Simple_repeat 2 161 0 429 330 35 0 chr2 44743926 44744144 -205943710 + (CGGA)n Simple_repeat Simple_repeat 1 225 0 192 77 0 0 chr2 44744491 44744517 -205943337 + (CA)n Simple_repeat Simple_repeat 1 26 0 650 247 12 105 chr2 44745665 44745865 -205941989 - MIR SINE MIR -38 224 7 2320 110 3 0 chr2 44745865 44746166 -205941688 - AluSx SINE Alu -10 302 1 650 247 12 105 chr2 44746166 44746177 -205941677 - MIR SINE MIR -255 7 36 2177 75 57 0 chr2 44746177 44746456 -205941398 - AluSg SINE Alu -15 295 1 650 247 12 105 chr2 44746456 44746490 -205941364 - MIR SINE MIR -225 37 1 1611 133 144 4 chr2 44746534 44746797 -205941057 + AluJb SINE Alu 1 300 -12 180 97 0 0 chr2 44747985 44748016 -205939838 + (CA)n Simple_repeat Simple_repeat 1 31 0 189 107 0 0 chr2 44748263 44748291 -205939563 + (TC)n Simple_repeat Simple_repeat 1 28 0 2160 105 10 20 chr2 44748804 44749109 -205938745 + AluJb SINE Alu 1 302 -10 2228 108 0 0 chr2 44749548 44749845 -205938009 - AluY SINE Alu -14 297 1 360 0 0 0 chr2 44750087 44750127 -205937727 + (TG)n Simple_repeat Simple_repeat 1 40 0 283 276 90 37 chr2 44750506 44750610 -205937244 - MIR SINE MIR -61 147 32 2368 75 0 0 chr2 44750610 44750902 -205936952 - AluSx SINE Alu -20 292 1 283 276 90 37 chr2 44750902 44750932 -205936922 - MIR SINE MIR -176 32 5 325 257 54 54 chr2 44751963 44752111 -205935743 + MIR3 SINE MIR 39 186 -22 369 0 0 0 chr2 44752347 44752388 -205935466 + (TG)n Simple_repeat Simple_repeat 2 42 0 529 265 26 26 chr2 44752853 44753004 -205934850 - MIR SINE MIR -38 224 74 249 245 49 59 chr2 44753031 44753133 -205934721 - Charlie7 DNA MER1_type 0 2612 2512 204 293 60 60 chr2 44753264 44753391 -205934463 - L2 LINE L2 -236 3036 2907 1914 146 3 27 chr2 44753391 44753692 -205934162 + AluJb SINE Alu 1 294 -18 204 293 60 60 chr2 44753692 44753714 -205934140 - L2 LINE L2 -364 2908 2887 249 195 0 0 chr2 44753786 44753827 -205934027 + L2 LINE L2 3221 3261 -11 189 143 12 191 chr2 44754179 44754263 -205933591 - MIR SINE MIR -36 226 158 976 235 22 86 chr2 44754263 44754328 -205933526 - MLT1I LTR MaLR 0 409 341 1354 143 128 59 chr2 44754328 44754601 -205933253 - AluJo SINE Alu -20 292 1 976 235 22 86 chr2 44754601 44754897 -205932957 - MLT1I LTR MaLR -68 341 71 2470 65 6 43 chr2 44755589 44755911 -205931943 + AluSg SINE Alu 1 310 0 2115 88 0 15 chr2 44755945 44756217 -205931637 + AluSx SINE Alu 35 302 -10 2380 67 0 3 chr2 44756220 44756591 -205931263 + AluY SINE Alu 1 370 0 690 126 68 0 chr2 44756597 44756700 -205931154 + AluJb SINE Alu 9 118 -194 2223 124 0 0 chr2 44756743 44757041 -205930813 - AluSx SINE Alu -14 298 1 32 26 0 0 chr2 44757043 44757082 -205930772 + AT_rich Low_complexity Low_complexity 1 39 0 326 266 127 0 chr2 44757344 44757497 -205930357 + MIR SINE MIR 9 184 -73 2248 128 0 3 chr2 44758596 44758902 -205928952 - AluSx SINE Alu -7 305 1 994 208 77 0 chr2 44760164 44760371 -205927483 + MER58A DNA MER1_type 1 223 -1 2209 116 0 35 chr2 44761002 44761320 -205926534 + AluSc SINE Alu 1 307 -2 2236 104 20 3 chr2 44762088 44762387 -205925467 - AluSp SINE Alu -9 304 1 1799 172 11 7 chr2 44762430 44762715 -205925139 - AluJb SINE Alu -21 291 6 216 246 0 35 chr2 44763135 44763192 -205924662 + L2 LINE L2 3138 3192 -80 22 0 0 0 chr2 44763382 44763404 -205924450 + AT_rich Low_complexity Low_complexity 1 22 0 1723 127 223 17 chr2 44763605 44763960 -205923894 + MSTA LTR MaLR 1 428 0 10042 132 7 35 chr2 44763962 44764547 -205923307 + MSTA-int LTR MaLR 3 603 -977 2266 128 0 0 chr2 44764547 44764845 -205923009 + AluSq SINE Alu 1 298 -15 10042 132 7 35 chr2 44764845 44765883 -205921971 + MSTA-int LTR MaLR 603 1580 0 1964 122 173 35 chr2 44765883 44766218 -205921636 + MSTA LTR MaLR 1 395 -33 2227 85 53 0 chr2 44766218 44766501 -205921353 - AluSp SINE Alu -15 298 1 1964 122 173 35 chr2 44766501 44766541 -205921313 + MSTA LTR MaLR 395 428 0 430 285 101 14 chr2 44766560 44766767 -205921087 + L2 LINE L2 2406 2630 -684 405 352 46 28 chr2 44766876 44767111 -205920743 - L2 LINE L2 -458 2856 2614 2017 117 58 0 chr2 44767111 44767385 -205920469 + AluSq SINE Alu 3 292 -21 405 352 46 28 chr2 44767385 44767433 -205920421 - L2 LINE L2 -700 2614 2568 2017 144 7 13 chr2 44767949 44768247 -205919607 - AluSx SINE Alu -16 296 1 907 276 26 16 chr2 44768377 44768688 -205919166 + MLT1J LTR MaLR 46 359 -152 2110 128 3 0 chr2 44768787 44769084 -205918770 + AluSx SINE Alu 1 298 -14 789 219 30 82 chr2 44769149 44769418 -205918436 - MER21B LTR ERV1 -379 484 230 2408 161 4 42 chr2 44769420 44769892 -205917962 - L1MB7 LINE L1 0 6184 5731 2122 119 0 7 chr2 44770286 44770604 -205917250 - AluSx SINE Alu 0 316 1 2203 123 16 3 chr2 44770614 44770922 -205916932 - AluSx SINE Alu 0 312 1 283 289 183 66 chr2 44771150 44771347 -205916507 + L2 LINE L2 3029 3248 -24 2490 73 0 13 chr2 44771818 44772133 -205915721 + AluSq SINE Alu 1 311 -2 202 295 158 0 chr2 44773020 44773115 -205914739 - MIR SINE MIR -79 129 20 940 279 251 56 chr2 44774158 44774854 -205913000 - L3 LINE CR1 -6 1571 740 182 179 0 26 chr2 44774867 44774906 -205912948 - MIR SINE MIR -3 259 222 448 314 118 35 chr2 44775055 44775393 -205912461 - L2 LINE L2 -353 2961 2596 636 162 4 2 chr2 44775627 44775867 -205911987 + AluJb SINE Alu 1 287 -25 614 317 58 44 chr2 44775893 44776237 -205911617 - L3 LINE CR1 -883 694 346 2462 74 3 0 chr2 44776569 44776867 -205910987 - AluSg SINE Alu -11 299 1 2309 112 0 0 chr2 44776922 44777226 -205910628 - AluSx SINE Alu -8 304 1 2865 83 25 92 chr2 44777553 44778369 -205909485 + SVA Other Other 393 868 -520 1178 38 5 38 chr2 44778386 44778595 -205909259 + SVA Other Other 665 866 -520 28 95 0 0 chr2 44778610 44778694 -205909160 + GC_rich Low_complexity Low_complexity 1 84 0 1147 117 48 91 chr2 44778807 44779038 -205908816 + AluJo SINE Alu 82 302 -10 293 270 68 0 chr2 44779181 44779255 -205908599 + MIR SINE MIR 28 106 -102 388 228 265 31 chr2 44780700 44780862 -205906992 + MIR SINE MIR 63 262 0 300 284 110 9 chr2 44782067 44782176 -205905678 - L1ME4a LINE L1 -40 6081 5962 1913 169 0 13 chr2 44782262 44782576 -205905278 - AluJo SINE Alu -2 310 1 308 335 39 26 chr2 44782898 44783053 -205904801 + L2 LINE L2 2934 3090 -182 2201 113 3 0 chr2 44783456 44783748 -205904106 + AluSp SINE Alu 1 293 -20 723 234 92 44 chr2 44783752 44783979 -205903875 - MIR SINE MIR 0 262 25 209 237 258 21 chr2 44784171 44784264 -205903590 - L2 LINE L2 -7 3306 3192 238 246 0 0 chr2 44784475 44784532 -205903322 + MARNA DNA Mariner 314 370 -216 1716 170 11 11 chr2 44784838 44785150 -205902704 - AluJo SINE Alu 0 312 1 1142 170 42 23 chr2 44785151 44785416 -205902438 - MER33 DNA MER1_type -54 270 1 505 204 10 0 chr2 44786049 44786147 -205901707 + MER94 DNA DNA 4 102 -32 231 309 238 8 chr2 44788075 44788201 -205899653 + MIR SINE MIR 6 160 -102 969 244 70 11 chr2 44788202 44788473 -205899381 + MSTD LTR MaLR 1 287 -109 233 88 0 0 chr2 44788498 44788532 -205899322 + MSTD LTR MaLR 424 457 0 987 119 15 0 chr2 44788854 44788988 -205898866 - AluSg/x SINE Alu -20 292 157 2229 117 0 13 chr2 44789034 44789368 -205898486 + AluSx SINE Alu 3 312 0 932 183 0 0 chr2 44789368 44789510 -205898344 + AluSg/x SINE Alu 132 273 -37 204 40 0 0 chr2 44789514 44789539 -205898315 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2597 48 3 3 chr2 44789662 44789972 -205897882 - AluY SINE Alu -1 310 1 306 261 45 9 chr2 44790004 44790115 -205897739 - L1MC4a LINE L1 -1877 5931 5817 1436 160 4 17 chr2 44790116 44790347 -205897507 - AluJo SINE Alu 0 312 85 267 54 0 0 chr2 44790714 44790751 -205897103 + (CCAA)n Simple_repeat Simple_repeat 2 38 0 348 286 8 25 chr2 44792324 44792443 -205895411 - L2 LINE L2 -4 3268 3152 311 150 17 0 chr2 44792508 44792568 -205895286 + GA-rich Low_complexity Low_complexity 3 63 0 263 224 0 0 chr2 44794265 44794302 -205893552 + AluSq/x SINE Alu 85 124 -179 216 0 0 0 chr2 44794302 44794326 -205893528 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 263 224 0 0 chr2 44794326 44794346 -205893508 + AluSq/x SINE Alu 123 142 -161 436 294 130 0 chr2 44794482 44794666 -205893188 + MIR SINE MIR 53 260 -2 604 211 103 36 chr2 44794792 44794986 -205892868 - MIR SINE MIR -36 226 20 257 136 0 0 chr2 44795030 44795074 -205892780 - AluJb SINE Alu -6 295 252 940 154 0 18 chr2 44795074 44795117 -205892737 - AluJb SINE Alu -146 166 124 2249 106 0 0 chr2 44795117 44795418 -205892436 + AluSg SINE Alu 1 301 -9 940 154 0 18 chr2 44795418 44795543 -205892311 - AluJb SINE Alu -188 124 1 2306 100 7 0 chr2 44795680 44795989 -205891865 + AluSx SINE Alu 1 311 -1 622 131 228 49 chr2 44795992 44796184 -205891670 + L1MB7 LINE L1 5668 5898 -256 297 220 11 16 chr2 44797587 44797779 -205890075 + (CA)n Simple_repeat Simple_repeat 1 190 0 382 259 9 5 chr2 44797855 44798074 -205889780 + (CA)n Simple_repeat Simple_repeat 1 220 0 271 0 51 0 chr2 44798317 44798356 -205889498 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 44802788 44802809 -205885045 + AT_rich Low_complexity Low_complexity 1 21 0 28 71 0 0 chr2 44803228 44803284 -205884570 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 44803289 44803310 -205884544 + (CTG)n Simple_repeat Simple_repeat 1 21 0 195 173 0 0 chr2 44803569 44803621 -205884233 + GA-rich Low_complexity Low_complexity 2 53 0 29 28 0 0 chr2 44805221 44805257 -205882597 + GC_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 44805335 44805359 -205882495 + GC_rich Low_complexity Low_complexity 1 24 0 30 0 0 0 chr2 44805491 44805521 -205882333 + GC_rich Low_complexity Low_complexity 1 30 0 313 364 35 7 chr2 44806741 44806884 -205880970 + MIR SINE MIR 21 146 -62 750 155 197 0 chr2 44807842 44807984 -205879870 - FAM SINE Alu -5 170 1 192 40 0 0 chr2 44808475 44808500 -205879354 + (GA)n Simple_repeat Simple_repeat 1 25 0 186 71 0 0 chr2 44808499 44808527 -205879327 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 2068 78 3 14 chr2 44808527 44808811 -205879043 - AluSg1 SINE Alu -28 281 1 2494 71 0 0 chr2 44810846 44811157 -205876697 - AluY SINE Alu 0 311 1 1417 140 199 7 chr2 44811980 44812266 -205875588 - MER58B DNA MER1_type 0 341 1 196 315 148 0 chr2 44812759 44812867 -205874987 - MIR SINE MIR -17 245 122 1819 111 21 90 chr2 44813317 44813650 -205874204 - AluSx SINE Alu 0 312 3 2064 125 0 0 chr2 44813662 44813959 -205873895 - AluSx SINE Alu -15 297 1 2181 105 7 0 chr2 44813965 44814271 -205873583 - AluSp SINE Alu -5 308 1 2410 47 0 10 chr2 44814492 44814788 -205873066 - AluY SINE Alu -18 293 1 429 176 0 0 chr2 44815255 44815323 -205872531 + AluJ/FLAM SINE Alu 2 69 -243 1254 155 30 125 chr2 44815342 44815459 -205872395 + L1M4 LINE L1 4657 4783 -1363 2381 55 0 32 chr2 44815459 44815769 -205872085 + AluY SINE Alu 1 300 -11 1254 155 30 125 chr2 44815769 44816044 -205871810 + L1M4 LINE L1 4783 5012 -1134 1951 143 14 0 chr2 44816313 44816606 -205871248 - AluSx SINE Alu -15 297 1 476 317 5 55 chr2 44817031 44817230 -205870624 - MIR SINE MIR -50 212 24 252 292 15 0 chr2 44817240 44817305 -205870549 - L2 LINE L2 -7 3306 3241 878 148 0 3 chr2 44817352 44817712 -205870142 + (CA)n Simple_repeat Simple_repeat 1 358 0 2354 73 3 0 chr2 44818312 44818613 -205869241 + AluSp SINE Alu 1 302 -11 2153 99 3 7 chr2 44818819 44819122 -205868732 + AluSx SINE Alu 1 302 -10 544 298 147 30 chr2 44819283 44819872 -205867982 + L1ME4a LINE L1 5355 5933 -188 2089 134 0 0 chr2 44819914 44820219 -205867635 - AluSx SINE Alu -7 305 1 22 0 0 0 chr2 44820219 44820241 -205867613 + AT_rich Low_complexity Low_complexity 1 22 0 219 114 0 0 chr2 44820322 44820357 -205867497 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 1736 167 10 13 chr2 44820392 44820697 -205867157 + AluJo SINE Alu 1 304 -8 1635 124 109 0 chr2 44820697 44821006 -205866848 + AluSx SINE Alu 1 312 0 198 328 16 0 chr2 44821276 44821337 -205866517 + L2 LINE L2 3247 3308 -5 478 198 58 41 chr2 44821436 44821557 -205866297 + MER91C DNA MER1_type 1 123 -17 307 282 0 0 chr2 44821773 44821851 -205866003 + MIR SINE MIR 67 144 -118 294 301 12 0 chr2 44822092 44822175 -205865679 + MIR3 SINE MIR 77 160 -48 1910 103 81 0 chr2 44822199 44822472 -205865382 + AluSx SINE Alu 1 295 -17 951 201 19 115 chr2 44822649 44823041 -205864813 - L1MD3 LINE L1 0 8040 7599 1571 156 59 4 chr2 44823249 44823519 -205864335 + AluJb SINE Alu 14 298 -14 2032 123 0 0 chr2 44823793 44824102 -205863752 - AluSx SINE Alu 0 309 1 548 243 236 40 chr2 44824129 44824549 -205863305 + LTR67 LTR ERVL 49 550 -7 2204 109 3 10 chr2 44824918 44825231 -205862623 - AluSx SINE Alu -1 311 1 404 360 0 7 chr2 44825292 44825431 -205862423 - MIR SINE MIR -111 151 14 915 119 41 128 chr2 44825490 44825558 -205862296 - MER2 DNA MER2_type -1 344 272 2136 119 13 10 chr2 44825558 44825869 -205861985 + AluSx SINE Alu 1 312 0 1564 136 12 16 chr2 44825874 44826124 -205861730 + AluJb SINE Alu 42 290 -22 915 119 41 128 chr2 44826124 44826292 -205861562 - MER2 DNA MER2_type -77 268 123 2063 107 0 0 chr2 44826294 44826585 -205861269 + AluSx SINE Alu 1 291 -21 263 247 34 11 chr2 44826585 44826674 -205861180 + MLT1L LTR MaLR 521 611 -4 193 347 14 14 chr2 44827248 44827320 -205860534 + MIR SINE MIR 20 91 -171 550 248 51 0 chr2 44827332 44827469 -205860385 - MLT1G1 LTR MaLR -5 590 447 1583 183 25 0 chr2 44827491 44827770 -205860084 - AluJo SINE Alu -26 286 1 353 214 122 20 chr2 44827777 44827875 -205859979 + MER45B DNA AcHobo 127 234 -806 2097 186 30 23 chr2 44827875 44827982 -205859872 + MER45B DNA AcHobo 554 659 -922 2011 97 23 39 chr2 44827982 44828292 -205859562 + AluSq SINE Alu 1 305 -8 2097 186 30 23 chr2 44828292 44828658 -205859196 + MER45B DNA AcHobo 659 1030 -10 589 164 15 65 chr2 44828669 44828782 -205859072 - MLT1H LTR MaLR -339 210 73 348 24 0 0 chr2 44828782 44828823 -205859031 + (TG)n Simple_repeat Simple_repeat 1 41 0 589 164 15 65 chr2 44828823 44828862 -205858992 - MLT1H LTR MaLR -476 73 34 211 242 233 0 chr2 44828934 44829054 -205858800 + MIR SINE MIR 108 255 -7 2018 111 3 33 chr2 44829062 44829369 -205858485 - AluSx SINE Alu -14 298 1 973 269 186 25 chr2 44829428 44830123 -205857731 - L2 LINE L2 -2 3311 2504 692 262 39 102 chr2 44831598 44831861 -205855993 + L2 LINE L2 2916 3194 -119 1678 129 98 11 chr2 44831861 44832148 -205855706 + AluJo SINE Alu 1 312 0 692 262 39 102 chr2 44832148 44832207 -205855647 + L2 LINE L2 3194 3209 -104 2385 87 0 0 chr2 44832207 44832517 -205855337 - AluSq SINE Alu -3 310 1 692 262 39 102 chr2 44832517 44832605 -205855249 + L2 LINE L2 3209 3301 -12 402 272 283 11 chr2 44833510 44833690 -205854164 + MIR SINE MIR 33 261 -1 182 297 50 40 chr2 44833766 44833867 -205853987 - MER5A DNA MER1_type -7 182 81 245 285 200 8 chr2 44834074 44834204 -205853650 + MIR SINE MIR 108 262 0 495 145 0 0 chr2 44834733 44834816 -205853038 + (CACCT)n Simple_repeat Simple_repeat 3 85 0 481 286 137 11 chr2 44834832 44835014 -205852840 - MIR SINE MIR -10 252 48 731 263 133 24 chr2 44835225 44835518 -205852336 + L2 LINE L2 2989 3313 0 296 236 14 0 chr2 44835655 44835727 -205852127 - MER91B DNA MER1_type -116 74 2 1867 126 0 0 chr2 44838152 44838421 -205849433 - AluSx SINE Alu -7 305 37 391 259 22 22 chr2 44839217 44839356 -205848498 + MIR SINE MIR 39 177 -85 240 111 0 0 chr2 44839830 44839866 -205847988 + MIR SINE MIR 118 153 -109 1267 160 18 18 chr2 44841178 44841397 -205846457 + MER20 DNA MER1_type 1 219 0 259 219 219 0 chr2 44841668 44841741 -205846113 + MIR3 SINE MIR 114 202 -6 534 291 13 0 chr2 44842661 44842812 -205845042 + MIR SINE MIR 102 254 -8 198 281 10 62 chr2 44843576 44843672 -205844182 - MIR3 SINE MIR -21 187 97 700 103 41 20 chr2 44843859 44844005 -205843849 - MER53 DNA DNA -38 151 3 1422 240 78 21 chr2 44844467 44844900 -205842954 - Charlie4a DNA MER1_type -8 500 43 183 265 41 0 chr2 44845988 44846037 -205841817 + MER5A DNA MER1_type 60 110 -79 186 133 0 0 chr2 44846248 44846278 -205841576 + (GGGTG)n Simple_repeat Simple_repeat 4 33 0 277 70 0 0 chr2 44846668 44846711 -205841143 - AluSx SINE Alu -4 298 256 210 37 0 0 chr2 44846811 44846838 -205841016 + (GA)n Simple_repeat Simple_repeat 2 28 0 2149 105 0 7 chr2 44846838 44847115 -205840739 - AluSx SINE Alu -34 278 4 311 339 33 70 chr2 44847579 44847678 -205840176 + L2 LINE L2 2525 2626 -688 1870 159 7 17 chr2 44847678 44847973 -205839881 - AluJb SINE Alu -20 292 1 311 339 33 70 chr2 44847973 44848115 -205839739 + L2 LINE L2 2626 2757 -557 2958 143 57 16 chr2 44848583 44849143 -205838711 + L1MB5 LINE L1 5584 6166 -8 762 171 8 0 chr2 44849169 44849337 -205838517 + FLAM_C SINE Alu 1 169 0 217 349 41 35 chr2 44850743 44850912 -205836942 + L2 LINE L2 684 853 -2461 329 248 152 16 chr2 44850955 44851080 -205836774 - MIR SINE MIR -10 252 111 358 299 142 37 chr2 44851948 44852349 -205835505 + L2 LINE L2 1785 2227 -1087 982 253 72 84 chr2 44852491 44853072 -205834782 + MLT1K LTR MaLR 5 578 -10 831 121 0 9 chr2 44854815 44854931 -205832923 + FLAM_C SINE Alu 3 117 -16 1331 181 43 63 chr2 44855006 44855177 -205832677 - AluJb SINE Alu -15 297 133 198 0 0 0 chr2 44855177 44855199 -205832655 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1331 181 43 63 chr2 44855199 44855326 -205832528 - AluJb SINE Alu -179 133 5 879 190 0 0 chr2 44855328 44855465 -205832389 - AluJo SINE Alu -175 137 1 202 183 398 11 chr2 44855505 44855598 -205832256 - MIR SINE MIR -61 147 19 792 132 34 117 chr2 44856698 44856827 -205831027 - MER53 DNA DNA 0 189 82 2404 106 3 0 chr2 44856827 44857139 -205830715 + AluSp SINE Alu 1 313 0 792 132 34 117 chr2 44857139 44857214 -205830640 - MER53 DNA DNA -107 82 2 929 271 92 5 chr2 44858190 44858559 -205829295 - L1MC4a LINE L1 -1910 5898 5498 1222 119 0 0 chr2 44858575 44858735 -205829119 - AluSg/x SINE Alu -17 293 134 581 131 12 0 chr2 44858735 44858819 -205829035 - AluJ/FLAM SINE Alu -226 86 2 272 242 95 57 chr2 44858825 44859036 -205828818 - L1MC4a LINE L1 -2326 5482 5264 439 86 0 0 chr2 44859064 44859122 -205828732 + FLAM_A SINE Alu 19 76 -56 457 357 117 27 chr2 44859137 44859658 -205828196 - L1M4 LINE L1 -3145 3001 2434 258 258 17 17 chr2 44859669 44859789 -205828065 - L1M4 LINE L1 -3733 2413 2294 1615 124 0 0 chr2 44859799 44860016 -205827838 - AluSg/x SINE Alu -1 311 95 1793 95 0 99 chr2 44860028 44860214 -205827640 - AluSx SINE Alu -18 294 146 2318 107 3 3 chr2 44860214 44860522 -205827332 - AluSq SINE Alu -4 309 2 1793 95 0 99 chr2 44860522 44860629 -205827225 - AluSx SINE Alu -166 146 30 804 277 63 58 chr2 44860707 44861154 -205826700 + MLT1J LTR MaLR 39 487 -24 517 250 173 13 chr2 44861344 44861500 -205826354 + MER5A DNA MER1_type 9 189 0 272 283 78 74 chr2 44861920 44862164 -205825690 + MLT1L LTR MaLR 197 441 -174 1297 65 12 6 chr2 44862325 44862494 -205825360 - L1PA10 LINE L1 -12 6156 5987 2448 93 3 0 chr2 44862859 44863171 -205824683 - AluSp SINE Alu 0 313 1 549 0 0 0 chr2 44864517 44864578 -205823276 + (CA)n Simple_repeat Simple_repeat 2 62 0 2320 82 0 38 chr2 44864896 44865211 -205822643 + AluY SINE Alu 1 303 -8 182 296 0 42 chr2 44865917 44865988 -205821866 + L2 LINE L2 3184 3251 -21 464 332 79 3 chr2 44866039 44866426 -205821428 + MLT1J LTR MaLR 20 463 -48 392 210 76 34 chr2 44868728 44868847 -205819007 + MIR SINE MIR 16 139 -69 344 329 7 7 chr2 44869166 44869303 -205818551 + MIR SINE MIR 21 157 -105 843 203 6 6 chr2 44869307 44869470 -205818384 + FAM SINE Alu 1 47 -2 998 243 160 50 chr2 44870085 44870199 -205817655 - L2 LINE L2 0 3313 3213 2531 73 7 0 chr2 44870199 44870501 -205817353 - AluSx SINE Alu -8 304 1 998 243 160 50 chr2 44870501 44871021 -205816833 - L2 LINE L2 -100 3213 2580 245 250 67 0 chr2 44871017 44871077 -205816777 + L2 LINE L2 3249 3312 -1 * 1297 141 9 5 chr2 44921162 44921375 -205766479 + AluSg/x SINE Alu 97 310 0 189 0 0 0 chr2 44921417 44921438 -205766416 + (A)n Simple_repeat Simple_repeat 1 21 0 1855 159 62 19 chr2 44921438 44921808 -205766046 - MSTB LTR MaLR -40 386 1 2326 108 0 13 chr2 44922088 44922404 -205765450 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 44922836 44922858 -205764996 + AT_rich Low_complexity Low_complexity 1 22 0 2219 64 3 7 chr2 44923204 44923511 -205764343 - AluSp SINE Alu 0 306 1 1948 232 48 2 chr2 44923651 44924125 -205763729 - MLT1F LTR MaLR -46 496 1 249 146 0 0 chr2 44924126 44924167 -205763687 - MSTA LTR MaLR 0 428 388 1187 120 0 0 chr2 44924167 44924325 -205763529 + AluSx SINE Alu 1 158 -154 307 293 73 20 chr2 44924809 44924825 -205763029 + L1ME3A LINE L1 6010 6024 -146 1826 159 3 46 chr2 44924825 44925151 -205762703 - AluSx SINE Alu 0 312 1 307 293 73 20 chr2 44925151 44925284 -205762570 + L1ME3A LINE L1 6024 6167 -3 5384 28 0 11 chr2 44925626 44926269 -205761585 + L1PA3 LINE L1 5517 6152 -3 34 24 0 0 chr2 44927301 44927342 -205760512 + AT_rich Low_complexity Low_complexity 1 41 0 1870 149 56 3 chr2 44927345 44927633 -205760221 + AluJb SINE Alu 1 303 -9 2078 72 4 4 chr2 44927896 44928161 -205759693 + AluSg SINE Alu 3 267 -43 265 315 0 34 chr2 44929932 44930021 -205757833 - L3 LINE CR1 -16 1561 1476 836 317 100 11 chr2 44930032 44930471 -205757383 - L2 LINE L2 0 3313 2836 549 305 199 54 chr2 44930572 44930643 -205757211 - L3 LINE CR1 -211 1366 1307 2515 53 0 0 chr2 44930643 44930945 -205756909 + AluY SINE Alu 1 302 -9 549 305 199 54 chr2 44930945 44931610 -205756244 - L3 LINE CR1 -270 1307 523 946 174 52 28 chr2 44931914 44932127 -205755727 + MER20 DNA MER1_type 1 218 -1 2044 131 0 13 chr2 44933231 44933536 -205754318 - AluJb SINE Alu -10 302 2 1779 92 118 7 chr2 44933909 44934180 -205753674 - AluSc SINE Alu -8 301 1 300 238 66 83 chr2 44934478 44934659 -205753195 - L1ME4a LINE L1 -107 6014 5837 2763 133 43 52 chr2 44934661 44934741 -205753113 - L1MB2 LINE L1 -6 6165 6086 1742 91 30 23 chr2 44934741 44935005 -205752849 - L1PB1 LINE L1 -2 6149 5884 2763 133 43 52 chr2 44935005 44935526 -205752328 - L1MB2 LINE L1 -85 6086 5569 237 313 16 0 chr2 44935651 44935715 -205752139 + L2 LINE L2 3208 3272 0 342 344 51 32 chr2 44935732 44935889 -205751965 + MIR3 SINE MIR 35 194 -14 255 217 0 17 chr2 44935918 44935978 -205751876 + L2 LINE L2 3222 3280 -33 181 265 0 0 chr2 44936662 44936696 -205751158 - L2 LINE L2 -102 3170 3137 337 365 39 19 chr2 44937161 44937317 -205750537 - L3b LINE CR1 -24 1559 1401 1928 125 3 52 chr2 44937502 44937807 -205750047 - AluSg SINE Alu -6 304 15 353 333 49 0 chr2 44937850 44937973 -205749881 - L2 LINE L2 -1 3271 3143 506 311 101 0 chr2 44938046 44938265 -205749589 - MIR SINE MIR -10 252 12 614 186 0 0 chr2 44938430 44938527 -205749327 - FLAM_A SINE Alu -44 98 2 22 0 0 0 chr2 44938795 44938817 -205749037 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr2 44940165 44940209 -205747645 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 44940497 44940519 -205747335 + AT_rich Low_complexity Low_complexity 1 22 0 323 278 33 40 chr2 44941248 44941416 -205746438 + MIR SINE MIR 31 198 -64 2081 122 3 7 chr2 44941612 44941906 -205745948 - AluSx SINE Alu -19 293 1 270 306 92 0 chr2 44942006 44942104 -205745750 + L1MEd LINE L1 499 605 -5514 237 33 0 0 chr2 44942232 44942262 -205745592 + (TTG)n Simple_repeat Simple_repeat 1 30 0 5728 150 10 7 chr2 44942296 44943085 -205744769 - L1PB1 LINE L1 -1 6150 5365 231 36 0 0 chr2 44943085 44943113 -205744741 + (TTC)n Simple_repeat Simple_repeat 2 29 0 2270 85 3 3 chr2 44943115 44943397 -205744457 - AluSp SINE Alu -31 282 1 5728 150 10 7 chr2 44943397 44944191 -205743663 - L1PB1 LINE L1 -786 5365 4558 393 285 8 24 chr2 44944192 44944315 -205743539 + L2 LINE L2 1729 1849 -1465 * 1612 263 129 12 chr2 44944292 44944572 -205743282 + L2 LINE L2 2368 2614 -699 1943 140 3 16 chr2 44944572 44944879 -205742975 - AluSx SINE Alu -9 303 1 1612 263 129 12 chr2 44944879 44945273 -205742581 + L2 LINE L2 2614 3130 -183 2584 155 9 12 chr2 44945275 44945700 -205742154 + MER57B LTR ERV1 1 424 -10 301 105 70 0 chr2 44945868 44945925 -205741929 + L1MB3 LINE L1 6123 6183 0 255 351 21 0 chr2 44946262 44946356 -205741498 + MIR SINE MIR 44 139 -69 510 326 71 5 chr2 44946483 44946667 -205741187 - MER91A DNA MER1_type 0 196 1 2245 96 3 0 chr2 44946829 44947121 -205740733 + AluSc SINE Alu 1 293 -16 343 287 211 29 chr2 44947403 44947612 -205740242 + L2 LINE L2 2532 2778 -536 485 253 103 23 chr2 44948139 44948313 -205739541 + MIR SINE MIR 75 262 0 25 83 0 0 chr2 44948969 44949029 -205738825 + AT_rich Low_complexity Low_complexity 1 60 0 261 262 99 14 chr2 44949087 44949228 -205738626 + L1ME4a LINE L1 5967 6119 -2 1763 154 98 11 chr2 44950195 44950552 -205737302 + L1M3 LINE L1 5395 5782 -398 816 73 0 0 chr2 44950551 44950660 -205737194 + L1P4 LINE L1 5392 5500 -668 * 2250 105 0 13 chr2 44950775 44951081 -205736773 - AluSx SINE Alu -10 302 1 764 283 71 52 chr2 44951087 44951404 -205736450 - L1MEc LINE L1 -1376 4839 4529 2312 111 0 6 chr2 44951404 44951719 -205736135 - AluSq SINE Alu 0 313 1 764 283 71 52 chr2 44951719 44952089 -205735765 - L1MEc LINE L1 -1686 4529 4139 316 256 152 0 chr2 44952128 44952253 -205735601 - L1MEc LINE L1 -2205 4010 3867 935 228 56 16 chr2 44952325 44952575 -205735279 - L1ME3A LINE L1 -7 6163 5904 464 216 0 0 chr2 44952580 44952668 -205735186 - FRAM SINE Alu -17 159 72 475 284 134 24 chr2 44952730 44953066 -205734788 - L1MEc LINE L1 -2921 3294 2996 1988 135 0 0 chr2 44953066 44953370 -205734484 + AluSq SINE Alu 1 304 0 475 284 134 24 chr2 44953370 44953742 -205734112 - L1MEc LINE L1 -3219 2996 2507 1191 224 7 7 chr2 44954067 44954353 -205733501 - L1MEc LINE L1 -4260 2136 1851 1393 170 50 23 chr2 44954359 44954659 -205733195 - L1MB4 LINE L1 -32 6148 5841 1109 129 29 52 chr2 44954714 44954830 -205733024 - L1PA8 LINE L1 0 6172 6062 2149 130 0 7 chr2 44954830 44955138 -205732716 - AluSg SINE Alu -4 306 1 1109 129 29 52 chr2 44955138 44955231 -205732623 - L1PA8 LINE L1 -110 6062 5968 2109 217 141 13 chr2 44955357 44955980 -205731874 + L2 LINE L2 2013 2715 -599 2039 161 62 5 chr2 44955980 44956262 -205731592 + L1MB4 LINE L1 5570 5883 -297 1468 198 31 7 chr2 44956262 44956550 -205731304 + AluJb SINE Alu 18 312 0 2039 161 62 5 chr2 44956550 44956671 -205731183 + L1MB4 LINE L1 5883 5996 -184 21 0 0 0 chr2 44956673 44956694 -205731160 + AT_rich Low_complexity Low_complexity 1 21 0 407 333 104 42 chr2 44956700 44956988 -205730866 - L2 LINE L2 -962 2352 2047 1799 242 153 63 chr2 44957011 44957713 -205730141 + HAL1 LINE L1 30 667 -1840 1727 159 7 30 chr2 44957713 44958015 -205729839 + AluJb SINE Alu 1 295 -17 435 19 0 0 chr2 44958017 44958069 -205729785 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1799 242 153 63 chr2 44958069 44958314 -205729540 + HAL1 LINE L1 667 1066 -1441 49 80 0 0 chr2 44958331 44958443 -205729411 + AT_rich Low_complexity Low_complexity 1 112 0 1657 193 3 3 chr2 44958467 44958757 -205729097 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 44958988 44959010 -205728844 + AT_rich Low_complexity Low_complexity 1 22 0 887 263 87 82 chr2 44959657 44960360 -205727494 + L2 LINE L2 2632 3313 0 308 256 74 45 chr2 44960587 44960763 -205727091 + L1ME LINE L1 4819 4999 -1147 483 279 159 24 chr2 44961069 44961359 -205726495 + L1MC/D LINE L1 5376 5704 -2104 552 174 69 56 chr2 44961547 44961691 -205726163 + LTR40a LTR ERVL 1 146 -373 422 277 102 31 chr2 44961710 44961925 -205725929 + L1ME LINE L1 5191 5389 -773 2449 50 7 3 chr2 44961925 44962224 -205725630 + AluY SINE Alu 1 300 -11 422 277 102 31 chr2 44962224 44962494 -205725360 + L1ME LINE L1 5389 5717 -445 1963 100 32 44 chr2 44962602 44962943 -205724911 - Tigger7 DNA MER2_type 0 2487 2151 528 207 45 0 chr2 44962928 44963039 -205724815 - Tigger7 DNA MER2_type -575 130 15 * 621 153 0 0 chr2 44963045 44963143 -205724711 + Tigger7 DNA MER2_type 32 129 -2358 775 89 0 0 chr2 44963186 44963298 -205724556 + Tigger7 DNA MER2_type 2254 2365 -126 * 2524 155 27 0 chr2 44963295 44963708 -205724146 + MER44D DNA MER2_type 127 605 0 513 282 75 25 chr2 44964052 44964293 -205723561 - L1MC4a LINE L1 -1849 5959 5707 210 252 122 61 chr2 44965793 44965908 -205721946 - L2 LINE L2 -12 3301 3180 2087 115 0 20 chr2 44966061 44966366 -205721488 + AluSx SINE Alu 3 301 -11 505 342 12 112 chr2 44966720 44967138 -205720716 + L2 LINE L2 2896 3271 -1 189 0 0 0 chr2 44967522 44967543 -205720311 + (A)n Simple_repeat Simple_repeat 1 21 0 2249 104 0 22 chr2 44967546 44967864 -205719990 + AluSx SINE Alu 1 311 -1 2248 85 3 0 chr2 44969347 44969663 -205718191 - AluSp SINE Alu 0 317 1 242 365 71 0 chr2 44969716 44969842 -205718012 - MIR SINE MIR 0 262 128 538 298 0 7 chr2 44969846 44969987 -205717867 + MIR SINE MIR 3 142 -120 940 206 0 11 chr2 44970767 44970951 -205716903 + FRAM SINE Alu 1 174 -2 2023 132 0 3 chr2 44971029 44971318 -205716536 + AluJb SINE Alu 1 288 -24 551 79 106 1 chr2 44971318 44971993 -205715861 + (TA)n Simple_repeat Simple_repeat 1 745 0 353 282 39 0 chr2 44972256 44972412 -205715442 + L1MEc LINE L1 1567 1728 -4668 2295 251 71 17 chr2 44972432 44973069 -205714785 + L2 LINE L2 2307 2977 -337 315 298 48 0 chr2 44973188 44973272 -205714582 - MIR SINE MIR -151 111 24 435 296 17 17 chr2 44974513 44974628 -205713226 - MIR3 SINE MIR -30 178 64 219 258 21 65 chr2 44976139 44976232 -205711622 - L2 LINE L2 -2 3311 3223 369 142 208 50 chr2 44976532 44976652 -205711202 + MER103 DNA DNA 25 163 -3 240 111 0 0 chr2 44976655 44976691 -205711163 + (TC)n Simple_repeat Simple_repeat 1 36 0 919 274 77 77 chr2 44977379 44977988 -205709866 - MLT1L LTR MaLR -5 610 2 2025 125 3 22 chr2 44978488 44978800 -205709054 - AluJb SINE Alu -6 306 1 22 0 0 0 chr2 44978820 44978842 -205709012 + AT_rich Low_complexity Low_complexity 1 22 0 6306 126 71 19 chr2 44979833 44980026 -205707828 + Tigger3b DNA MER2_type 1 182 -2846 2279 86 7 0 chr2 44980026 44980316 -205707538 + AluSx SINE Alu 1 292 -20 6306 126 71 19 chr2 44980316 44981292 -205706562 + Tigger3b DNA MER2_type 182 1231 0 1855 172 0 17 chr2 44982389 44982691 -205705163 - AluJb SINE Alu -15 297 1 496 273 103 38 chr2 44983270 44983695 -205704159 - L1ME4a LINE L1 -102 6019 5567 1798 166 20 0 chr2 44983701 44984003 -205703851 - AluJb SINE Alu -4 308 1 227 360 64 25 chr2 44984151 44984387 -205703467 - L1ME LINE L1 -350 5771 5527 283 330 64 37 chr2 44984666 44984854 -205703000 + L2 LINE L2 2864 3056 -216 437 185 34 92 chr2 44985003 44985122 -205702732 + MIR SINE MIR 86 197 -65 25 0 0 0 chr2 44987026 44987051 -205700803 + AT_rich Low_complexity Low_complexity 1 25 0 558 283 46 0 chr2 44987608 44987781 -205700073 - MIR3 SINE MIR -5 203 23 1462 181 100 0 chr2 44988470 44988740 -205699114 - AluJb SINE Alu -13 299 3 465 268 21 21 chr2 44989484 44989626 -205698228 - MIR SINE MIR 0 262 121 29 0 0 0 chr2 44989687 44989716 -205698138 + AT_rich Low_complexity Low_complexity 1 29 0 6024 127 41 46 chr2 44990035 44990325 -205697529 + L1MA5A LINE L1 4708 4998 -1299 2015 103 59 0 chr2 44990325 44990615 -205697239 + AluSc SINE Alu 1 307 -2 6024 127 41 46 chr2 44990615 44990721 -205697133 + L1MA5A LINE L1 4998 5103 -1194 1966 113 23 23 chr2 44990721 44991031 -205696823 - AluSx SINE Alu 0 312 3 6024 127 41 46 chr2 44991031 44992238 -205695616 + L1MA5A LINE L1 5103 6295 -2 2514 196 56 2 chr2 44992292 44992516 -205695338 - L1P LINE L1 -1723 4423 4213 7232 52 16 0 chr2 44992516 44993652 -205694202 - L1PA8 LINE L1 -8 6164 5023 2514 196 56 2 chr2 44993652 44993993 -205693861 - L1P LINE L1 -1933 4213 3823 2106 118 3 7 chr2 44993993 44994298 -205693556 - AluSx SINE Alu -8 304 1 313 301 29 0 chr2 44994318 44994421 -205693433 - L1 LINE L1 -1977 4169 4064 329 302 0 10 chr2 44994459 44994555 -205693299 - L1 LINE L1 -2101 4045 3951 181 250 15 44 chr2 44995018 44995086 -205692768 + L2 LINE L2 3182 3247 -25 27 0 0 0 chr2 44996264 44996291 -205691563 + AT_rich Low_complexity Low_complexity 1 27 0 360 234 72 9 chr2 44996454 44996565 -205691289 - MIR SINE MIR -30 232 115 668 197 0 16 chr2 44996916 44997043 -205690811 + FAM SINE Alu 1 125 -60 1089 176 0 78 chr2 44997045 44997250 -205690604 + AluJo SINE Alu 87 275 -37 877 137 42 0 chr2 44997459 44997627 -205690227 + L1MB4 LINE L1 6006 6180 0 925 234 16 62 chr2 44997785 44997998 -205689856 + MIR SINE MIR 7 208 -54 2415 82 7 0 chr2 44997998 44998301 -205689553 + AluSq SINE Alu 1 305 -8 925 234 16 62 chr2 44998301 44998343 -205689511 + MIR SINE MIR 208 250 -12 1439 251 81 26 chr2 45000631 45001129 -205686725 - MLT1H1 LTR MaLR -63 506 1 251 418 49 9 chr2 45001164 45001492 -205686362 - L2 LINE L2 -843 2471 2131 1772 158 14 10 chr2 45003020 45003312 -205684542 - AluJb SINE Alu -19 293 1 22 56 0 0 chr2 45003379 45003415 -205684439 + AT_rich Low_complexity Low_complexity 1 36 0 437 127 0 0 chr2 45003451 45003530 -205684324 - AluS SINE Alu -6 305 227 22 0 0 0 chr2 45003837 45003859 -205683995 + AT_rich Low_complexity Low_complexity 1 22 0 2120 100 7 7 chr2 45004832 45005122 -205682732 - AluSx SINE Alu -22 290 1 428 174 12 37 chr2 45005147 45005308 -205682546 + CT-rich Low_complexity Low_complexity 2 158 0 655 150 0 53 chr2 45005308 45005495 -205682359 + (TCCC)n Simple_repeat Simple_repeat 3 179 0 279 0 0 0 chr2 45005651 45005682 -205682172 + (TG)n Simple_repeat Simple_repeat 2 32 0 1884 157 0 7 chr2 45005703 45005990 -205681864 - AluJb SINE Alu -27 285 1 237 273 0 18 chr2 45006662 45006717 -205681137 - L2 LINE L2 -6 3307 3254 250 364 13 0 chr2 45006995 45007072 -205680782 - MIR SINE MIR -84 124 47 237 283 109 22 chr2 45007364 45007502 -205680352 - L2 LINE L2 -922 2392 2243 397 239 0 23 chr2 45007508 45007596 -205680258 - MER81 DNA DNA -26 88 3 195 343 39 0 chr2 45007598 45007700 -205680154 - L2 LINE L2 -1062 2252 2147 399 229 99 72 chr2 45008182 45008456 -205679398 - L2 LINE L2 0 3313 2948 685 261 33 23 chr2 45009198 45009413 -205678441 - Charlie8 DNA MER1_type -2199 218 2 1854 148 105 6 chr2 45010052 45010384 -205677470 + MLT1A1 LTR MaLR 1 365 0 258 215 171 57 chr2 45010404 45010632 -205677222 - L1MC5 LINE L1 -733 7228 6975 3602 178 76 22 chr2 45010673 45011645 -205676209 - L1MB7 LINE L1 -19 6165 5148 1095 144 6 33 chr2 45011670 45011850 -205676004 - AluJo SINE Alu -16 296 122 4053 224 77 14 chr2 45011884 45013102 -205674752 - L1MB7 LINE L1 -1000 5146 3848 1261 166 209 11 chr2 45013102 45013385 -205674469 + MER44D DNA MER2_type 1 609 0 4053 224 77 14 chr2 45013385 45013407 -205674447 - L1MB7 LINE L1 -2298 3848 3829 278 87 0 22 chr2 45013835 45013881 -205673973 - MADE1 DNA Mariner 0 80 36 1630 181 34 46 chr2 45013947 45014296 -205673558 + MER7A DNA MER2_type 3 345 -1 2193 141 0 3 chr2 45014519 45014832 -205673022 + AluSx SINE Alu 1 312 0 335 318 65 7 chr2 45014843 45014997 -205672857 + L1ME3A LINE L1 5042 5204 -942 1101 267 82 15 chr2 45015082 45015654 -205672200 + L1ME3A LINE L1 5276 5897 -273 1184 158 30 21 chr2 45016122 45016356 -205671498 + MER46A DNA MER2_type 1 236 0 1698 143 23 36 chr2 45016815 45017122 -205670732 + AluSx SINE Alu 1 303 -9 825 127 0 28 chr2 45017663 45017805 -205670049 + AluSp/q SINE Alu 175 312 -1 383 234 0 92 chr2 45018077 45018218 -205669636 + MIR3 SINE MIR 75 202 -6 1955 137 38 25 chr2 45018606 45018971 -205668883 + L1MB8 LINE L1 5809 6178 0 515 294 8 0 chr2 45020226 45020352 -205667502 + MIR SINE MIR 29 155 -107 26 0 0 0 chr2 45021604 45021630 -205666224 + AT_rich Low_complexity Low_complexity 1 26 0 329 238 38 31 chr2 45022186 45022346 -205665508 + L1MC5 LINE L1 7495 7655 -306 1716 171 80 16 chr2 45022788 45023163 -205664691 + MER57A LTR ERV1 3 401 -2 1786 148 13 20 chr2 45023526 45023824 -205664030 - AluJb SINE Alu -15 297 2 554 290 65 58 chr2 45023829 45024243 -205663611 + LTR68 LTR ERV1 2 418 -322 2177 160 70 10 chr2 45024248 45024649 -205663205 - MSTB LTR MaLR -1 425 1 2261 107 0 10 chr2 45024990 45025300 -205662554 + AluSg SINE Alu 1 307 -3 571 257 81 53 chr2 45025343 45025666 -205662188 + MARNA DNA Mariner 203 534 -52 243 215 11 86 chr2 45025589 45025682 -205662172 - MARNA DNA Mariner -458 128 43 * 191 234 0 104 chr2 45026042 45026119 -205661735 - MIR SINE MIR -71 191 123 191 125 0 0 chr2 45026610 45026642 -205661212 - L2 LINE L2 0 3313 3282 518 241 64 16 chr2 45026648 45026835 -205661019 - LTR16A LTR ERVL -6 444 249 318 253 46 23 chr2 45026960 45027047 -205660807 - L2 LINE L2 -16 3256 3168 1592 205 18 0 chr2 45027219 45027502 -205660352 + AluJo SINE Alu 13 300 -12 624 165 0 0 chr2 45027509 45027618 -205660236 - FLAM_C SINE Alu -11 132 24 1973 167 3 3 chr2 45027632 45027944 -205659910 - AluJb SINE Alu 0 312 1 197 105 0 26 chr2 45028866 45028904 -205658950 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 2416 84 0 3 chr2 45028906 45029214 -205658640 - AluSc SINE Alu -2 307 1 804 171 44 6 chr2 45029418 45029576 -205658278 - MER20 DNA MER1_type -2 217 54 274 163 0 0 chr2 45029580 45029623 -205658231 - MER96B DNA MER1_type? -184 233 191 723 177 68 14 chr2 45029772 45029919 -205657935 - MER45A DNA AcHobo -23 155 1 457 191 45 0 chr2 45030093 45030182 -205657672 + AluJ/FLAM SINE Alu 1 93 -219 305 226 151 0 chr2 45030182 45030275 -205657579 + MER96B DNA MER1_type? 311 417 0 1050 171 33 0 chr2 45030313 45030494 -205657360 - MER5A DNA MER1_type -1 188 2 440 311 86 90 chr2 45030692 45030959 -205656895 + L2 LINE L2 2985 3250 -22 898 126 0 0 chr2 45031160 45031287 -205656567 + FLAM_C SINE Alu 1 127 -16 888 127 127 19 chr2 45031341 45031499 -205656355 + AluSc SINE Alu 118 292 -17 2386 84 0 0 chr2 45031601 45031900 -205655954 + AluY SINE Alu 1 299 -12 285 118 20 0 chr2 45031999 45032050 -205655804 + MADE1 DNA Mariner 1 52 -28 2050 140 20 0 chr2 45032277 45032570 -205655284 + AluSg SINE Alu 1 299 -11 1764 177 14 0 chr2 45032583 45032877 -205654977 - AluJb SINE Alu -12 300 3 323 316 100 42 chr2 45033330 45033640 -205654214 + LTR16A LTR ERVL 29 356 -94 211 93 70 47 chr2 45034011 45034054 -205653800 - L2 LINE L2 0 3313 3270 842 184 0 0 chr2 45034240 45034376 -205653478 + FRAM SINE Alu 4 139 -37 818 154 0 0 chr2 45034403 45034526 -205653328 + FLAM_C SINE Alu 1 123 -10 211 148 12 173 chr2 45034593 45034674 -205653180 - L2 LINE L2 -287 2985 2918 271 169 17 0 chr2 45034768 45034827 -205653027 - FLAM_A SINE Alu 0 133 74 1125 168 0 6 chr2 45036553 45036726 -205651128 - FRAM SINE Alu -8 168 1 728 237 212 19 chr2 45037122 45037600 -205650254 + MLT1H1 LTR MaLR 15 555 0 1101 254 61 33 chr2 45037700 45037861 -205649993 - MLT1D LTR MaLR -64 441 286 1834 99 201 10 chr2 45037861 45038175 -205649679 - THE1C LTR MaLR -1 374 1 1101 254 61 33 chr2 45038175 45038442 -205649412 - MLT1D LTR MaLR -219 286 1 816 228 115 16 chr2 45038469 45038850 -205649004 + MER65B LTR ERV1 1 514 -17 9563 144 52 111 chr2 45039002 45040456 -205647398 + L1M4c LINE L1 18 1461 -4921 1258 178 5 5 chr2 45040456 45040664 -205647190 + AluJb SINE Alu 87 294 -18 9563 144 52 111 chr2 45040664 45041715 -205646139 + L1M4c LINE L1 1461 2572 -3810 1629 157 17 7 chr2 45041715 45042015 -205645839 + L1MB3 LINE L1 5879 6181 -2 446 275 104 46 chr2 45042236 45042476 -205645378 + L2 LINE L2 3048 3301 -12 2282 114 0 0 chr2 45042708 45043014 -205644840 + AluSx SINE Alu 1 306 -6 413 281 26 26 chr2 45043248 45043362 -205644492 - MIR SINE MIR -64 144 31 1316 169 108 9 chr2 45044784 45045015 -205642839 - AluJo SINE Alu -20 292 39 1854 160 0 3 chr2 45045202 45045484 -205642370 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr2 45045486 45045514 -205642340 + (CA)n Simple_repeat Simple_repeat 2 29 0 475 242 166 0 chr2 45045668 45045825 -205642029 - HAL1 LINE L1 -874 1633 1451 493 224 174 31 chr2 45045846 45046167 -205641687 - HAL1 LINE L1 -1105 1402 1036 273 29 0 0 chr2 45046402 45046436 -205641418 + (CA)n Simple_repeat Simple_repeat 1 34 0 196 277 157 12 chr2 45047333 45047416 -205640438 + MIR SINE MIR 20 114 -148 195 42 0 0 chr2 45047429 45047453 -205640401 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 266 253 96 0 chr2 45047468 45047551 -205640303 + MIR SINE MIR 111 201 -61 471 35 0 0 chr2 45048017 45048074 -205639780 + (CA)n Simple_repeat Simple_repeat 2 58 0 207 0 0 0 chr2 45048882 45048905 -205638949 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 511 241 22 59 chr2 45049220 45049420 -205638434 + MIR SINE MIR 27 216 -46 190 391 36 0 chr2 45049420 45049530 -205638324 + L2 LINE L2 2502 2615 -699 188 347 92 0 chr2 45049961 45050059 -205637795 + L2 LINE L2 2678 2784 -530 481 266 44 38 chr2 45050291 45050449 -205637405 - L2 LINE L2 -1 3312 3154 372 265 0 0 chr2 45050470 45050553 -205637301 + L2 LINE L2 3190 3272 0 252 0 0 0 chr2 45051123 45051151 -205636703 + (A)n Simple_repeat Simple_repeat 1 28 0 518 253 76 83 chr2 45056241 45056699 -205631155 + L2 LINE L2 2156 2610 -704 248 258 0 0 chr2 45056809 45056875 -205630979 - MER103 DNA DNA -52 114 49 464 274 102 78 chr2 45056883 45057215 -205630639 + L2 LINE L2 2933 3272 0 413 256 98 0 chr2 45057233 45057366 -205630488 - MIR SINE MIR -16 246 101 2666 30 0 0 chr2 45057475 45057780 -205630074 + AluY SINE Alu 1 305 -6 2233 88 0 50 chr2 45058981 45059298 -205628556 + AluSc SINE Alu 1 301 -8 463 270 117 70 chr2 45059412 45059797 -205628057 - MLT1J LTR MaLR -81 430 28 349 289 84 59 chr2 45060144 45060190 -205627664 - MIR SINE MIR -11 251 208 2215 102 0 0 chr2 45060190 45060473 -205627381 + AluSc SINE Alu 1 283 -26 349 289 84 59 chr2 45060473 45060665 -205627189 - MIR SINE MIR -54 208 7 21 57 0 19 chr2 45060857 45060873 -205626981 + AT_rich Low_complexity Low_complexity 1 16 -36 1645 174 33 27 chr2 45060873 45061172 -205626682 + AluJo SINE Alu 1 301 -11 21 57 0 19 chr2 45061172 45061208 -205626646 + AT_rich Low_complexity Low_complexity 16 52 0 337 247 0 41 chr2 45061252 45061349 -205626505 - L1ME4a LINE L1 -38 6083 5991 1653 183 0 14 chr2 45062372 45062667 -205625187 + AluJo SINE Alu 12 302 -10 21 36 0 0 chr2 45062734 45062762 -205625092 + AT_rich Low_complexity Low_complexity 1 28 0 214 326 74 42 chr2 45062858 45062953 -205624901 - MIR SINE MIR -75 133 36 367 145 40 13 chr2 45063104 45063180 -205624674 - L1MB8 LINE L1 -32 6146 6069 1892 115 18 7 chr2 45063484 45063785 -205624069 + AluSx SINE Alu 1 304 0 262 197 61 0 chr2 45063786 45063852 -205624002 - L1ME1 LINE L1 -86 6080 6011 1408 168 9 5 chr2 45063867 45064081 -205623773 - AluJo SINE Alu -25 287 73 205 288 30 0 chr2 45067099 45067165 -205620689 - L2 LINE L2 -654 2660 2593 1564 142 4 4 chr2 45067838 45068070 -205619784 + AluSg/x SINE Alu 71 302 -10 1577 201 0 0 chr2 45068072 45068346 -205619508 - AluJo SINE Alu -38 274 1 231 232 360 8 chr2 45069811 45069936 -205617918 + MIR SINE MIR 23 191 -71 269 83 0 0 chr2 45069962 45069998 -205617856 - U2 snRNA snRNA -152 36 1 1495 185 10 43 chr2 45070051 45070354 -205617500 + AluJb SINE Alu 9 301 -11 26 0 0 0 chr2 45070407 45070433 -205617421 + AT_rich Low_complexity Low_complexity 1 26 0 623 200 0 0 chr2 45070433 45070543 -205617311 - FLAM_C SINE Alu -17 126 17 21 0 0 0 chr2 45071073 45071094 -205616760 + AT_rich Low_complexity Low_complexity 1 21 0 621 264 22 27 chr2 45071106 45071292 -205616562 - MIR SINE MIR -62 146 11 225 313 60 37 chr2 45071510 45071644 -205616210 - L2 LINE L2 -19 3294 3158 2186 91 14 0 chr2 45071685 45071972 -205615882 - AluSq SINE Alu -22 291 1 21 0 0 0 chr2 45072476 45072497 -205615357 + AT_rich Low_complexity Low_complexity 1 21 0 2212 95 0 3 chr2 45073218 45073514 -205614340 - AluY SINE Alu -16 295 1 2190 99 24 3 chr2 45073870 45074164 -205613690 - AluSx SINE Alu -12 300 1 1032 239 99 35 chr2 45074223 45074645 -205613209 - L1MC4 LINE L1 -241 7801 7353 1337 211 131 18 chr2 45074648 45075083 -205612771 + MLT1D LTR MaLR 3 486 -19 337 277 146 23 chr2 45075676 45075806 -205612048 - L2 LINE L2 -4 3309 3164 3819 217 51 48 chr2 45075998 45076774 -205611080 + L1MB8 LINE L1 2875 3658 -2488 2140 120 7 3 chr2 45076774 45077074 -205610780 + AluSq SINE Alu 1 301 -12 3819 217 51 48 chr2 45077074 45077619 -205610235 + L1MB8 LINE L1 3658 4200 -1946 846 297 61 11 chr2 45077911 45078271 -205609583 - HAL1b LINE L1 -702 646 269 2155 135 0 0 chr2 45078281 45078585 -205609269 - AluSx SINE Alu -8 304 1 25 0 0 28 chr2 45080494 45080518 -205607336 + AT_rich Low_complexity Low_complexity 1 25 -10 3095 83 51 7 chr2 45080518 45080952 -205606902 - MLT2A2 LTR ERVL 0 453 1 25 0 0 28 chr2 45080952 45080963 -205606891 + AT_rich Low_complexity Low_complexity 25 35 0 28 0 0 0 chr2 45080987 45081015 -205606839 + AT_rich Low_complexity Low_complexity 1 28 0 198 261 29 29 chr2 45081615 45081684 -205606170 - MIR SINE MIR -120 88 20 209 57 29 0 chr2 45082198 45082233 -205605621 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1509 180 3 63 chr2 45082237 45082537 -205605317 - AluJb SINE Alu -30 282 1 641 216 0 8 chr2 45082543 45082677 -205605177 - FLAM_A SINE Alu 0 133 1 25 31 0 0 chr2 45082688 45082720 -205605134 + AT_rich Low_complexity Low_complexity 1 32 0 193 98 49 0 chr2 45083908 45083949 -205603905 + (TA)n Simple_repeat Simple_repeat 1 43 0 27 49 0 0 chr2 45084047 45084088 -205603766 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 45084098 45084119 -205603735 + AT_rich Low_complexity Low_complexity 1 21 0 915 270 98 39 chr2 45084165 45084272 -205603582 - L1ME LINE L1 -369 5795 5696 1296 149 63 0 chr2 45084272 45084493 -205603361 + MER46A DNA MER2_type 2 236 0 915 270 98 39 chr2 45084493 45084893 -205602961 - L1ME LINE L1 -468 5696 5258 3850 176 20 65 chr2 45084972 45085692 -205602162 + L1MB8 LINE L1 4915 5553 -625 1357 218 66 33 chr2 45085692 45086054 -205601800 - MLT1A2 LTR MaLR 0 374 1 3850 176 20 65 chr2 45086054 45086648 -205601206 + L1MB8 LINE L1 5553 6172 -6 21 0 0 0 chr2 45087711 45087732 -205600122 + AT_rich Low_complexity Low_complexity 1 21 0 1207 199 17 0 chr2 45087797 45088028 -205599826 + MER46A DNA MER2_type 2 236 0 526 191 130 0 chr2 45088355 45088470 -205599384 - AluJo SINE Alu -176 136 7 335 269 102 0 chr2 45089151 45089259 -205598595 - L2 LINE L2 0 3313 3195 33 66 0 0 chr2 45089481 45089542 -205598312 + AT_rich Low_complexity Low_complexity 1 61 0 42159 36 3 2 chr2 45090298 45095673 -205592181 + L1P LINE L1 1 5382 -764 417 20 0 0 chr2 45295824 45295874 -205391980 + (TG)n Simple_repeat Simple_repeat 2 51 0 1807 116 0 63 chr2 45297412 45297544 -205390310 + AluJb SINE Alu 3 142 -170 225 0 0 0 chr2 45297544 45297569 -205390285 + (TA)n Simple_repeat Simple_repeat 2 26 0 1807 116 0 63 chr2 45297569 45297737 -205390117 + AluJb SINE Alu 142 284 -28 303 28 0 0 chr2 45297737 45297773 -205390081 + (CAT)n Simple_repeat Simple_repeat 2 37 0 2359 84 0 0 chr2 45297824 45298122 -205389732 + AluSc SINE Alu 1 298 -11 7191 56 3 58 chr2 45298485 45299469 -205388385 + SVA Other Other 451 1380 -6 1005 168 44 40 chr2 45301329 45301603 -205386251 + MER33 DNA MER1_type 44 318 -6 2226 131 0 0 chr2 45301672 45301969 -205385885 - AluSx SINE Alu -15 297 1 337 342 179 5 chr2 45302835 45303031 -205384823 + MIR SINE MIR 20 249 -13 226 213 25 50 chr2 45303327 45303407 -205384447 + L1ME LINE L1 5743 5820 -301 * 604 223 15 56 chr2 45303403 45303600 -205384254 + L1MC5 LINE L1 7729 7917 -44 4855 229 88 17 chr2 45304230 45305385 -205382469 + L1ME1 LINE L1 3088 4397 -1749 2179 100 3 19 chr2 45305385 45305694 -205382160 + AluSq SINE Alu 1 304 -9 4855 229 88 17 chr2 45305694 45306194 -205381660 + L1ME1 LINE L1 4397 4860 -1286 478 322 58 43 chr2 45306268 45306783 -205381071 - HAL1b LINE L1 -711 637 115 829 132 0 8 chr2 45306840 45306961 -205380893 + AluSg/x SINE Alu 174 293 -17 871 126 25 25 chr2 45307197 45307356 -205380498 - L1MB7 LINE L1 -22 6162 6004 304 255 29 0 chr2 45307360 45307462 -205380392 - L1MB7 LINE L1 -2379 5429 5325 717 192 0 0 chr2 45307860 45307980 -205379874 - FLAM_A SINE Alu -13 120 1 242 329 18 18 chr2 45308012 45308176 -205379678 + L1ME LINE L1 5616 5779 -342 2035 155 3 0 chr2 45308340 45308649 -205379205 + AluSx SINE Alu 1 310 -2 3771 168 21 14 chr2 45308712 45309432 -205378422 - L1MB7 LINE L1 -19 6165 5441 264 250 87 19 chr2 45309433 45309537 -205378317 + L1ME1 LINE L1 4874 4984 -1162 453 260 39 7 chr2 45309556 45309710 -205378144 + L1ME1 LINE L1 5051 5209 -937 1476 202 34 18 chr2 45309786 45310167 -205377687 + L1ME1 LINE L1 5219 5604 -562 41345 29 21 1 chr2 45310171 45316197 -205371657 + L1PA2 LINE L1 1 6152 -3 2292 206 34 7 chr2 45316228 45316790 -205371064 + L1ME1 LINE L1 5590 6166 0 1990 112 38 3 chr2 45316810 45317097 -205370757 + AluSx SINE Alu 1 297 -15 1890 134 0 72 chr2 45317373 45317708 -205370146 + AluJb SINE Alu 2 312 0 2657 191 34 19 chr2 45317765 45318295 -205369559 + MLT1F LTR MaLR 5 542 0 460 277 227 16 chr2 45319073 45319329 -205368525 + MLT1H1 LTR MaLR 43 352 -203 254 175 0 0 chr2 45319330 45319370 -205368484 + AluSg/x SINE Alu 139 178 -122 236 158 0 0 chr2 45319372 45319410 -205368444 + Alu SINE Alu 21 58 -262 385 193 68 130 chr2 45319490 45319625 -205368229 + MLT1H1 LTR MaLR 369 511 -44 2321 110 0 3 chr2 45319625 45319934 -205367920 - AluSq SINE Alu -5 308 1 499 125 45 0 chr2 45319942 45320030 -205367824 - L1MA8 LINE L1 -2 6289 6198 385 193 68 130 chr2 45320030 45320077 -205367777 + MLT1H1 LTR MaLR 518 548 -7 2149 123 7 0 chr2 45320413 45320705 -205367149 + AluSx SINE Alu 1 294 -18 206 32 32 0 chr2 45321459 45321490 -205366364 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1320 128 12 97 chr2 45321504 45321618 -205366236 - AluJo SINE Alu -70 242 161 2175 114 0 19 chr2 45321618 45321925 -205365929 - AluSx SINE Alu -11 301 1 1320 128 12 97 chr2 45321925 45322067 -205365787 - AluJo SINE Alu -151 161 8 22 0 0 0 chr2 45322083 45322105 -205365749 + AT_rich Low_complexity Low_complexity 1 22 0 2263 75 0 7 chr2 45322174 45322482 -205365372 + AluSc SINE Alu 1 306 0 4590 241 95 21 chr2 45322524 45324245 -205363609 - HAL1 LINE L1 -132 2375 528 267 255 52 52 chr2 45324671 45324824 -205363030 + HAL1 LINE L1 813 965 -1542 260 276 58 0 chr2 45324868 45324955 -205362899 - MIR SINE MIR -82 180 89 1124 68 0 0 chr2 45325300 45325432 -205362422 + AluSg1 SINE Alu 1 132 -177 285 29 0 0 chr2 45325487 45325521 -205362333 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2316 113 0 3 chr2 45325722 45326031 -205361823 + AluSg SINE Alu 1 308 -2 2113 119 61 0 chr2 45326234 45326527 -205361327 + AluSx SINE Alu 1 311 -1 2062 115 4 0 chr2 45327787 45328065 -205359789 + AluSx SINE Alu 1 279 -33 369 0 0 0 chr2 45328065 45328106 -205359748 + (CA)n Simple_repeat Simple_repeat 1 41 0 2175 109 0 0 chr2 45328180 45328490 -205359364 + AluSg SINE Alu 1 310 0 531 260 39 34 chr2 45328559 45328750 -205359104 + MIR SINE MIR 38 227 -35 947 241 17 9 chr2 45329229 45329461 -205358393 + MIR SINE MIR 5 238 -24 339 214 99 38 chr2 45329463 45329594 -205358260 + MIR SINE MIR 121 259 -3 180 179 0 0 chr2 45329834 45329873 -205357981 + A-rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 45329953 45329974 -205357880 + AT_rich Low_complexity Low_complexity 1 21 0 297 299 102 28 chr2 45330159 45330336 -205357518 - L2 LINE L2 -1265 2049 1860 1537 156 42 3 chr2 45330875 45331183 -205356671 - MER33 DNA MER1_type 0 324 5 436 333 0 0 chr2 45331189 45331312 -205356542 + L2 LINE L2 3191 3313 0 28 29 0 0 chr2 45331997 45332032 -205355822 + AT_rich Low_complexity Low_complexity 1 35 0 238 245 28 75 chr2 45332228 45332334 -205355520 + MIR SINE MIR 99 199 -63 6230 167 42 38 chr2 45333896 45335054 -205352800 + L1MB7 LINE L1 3841 4993 -1191 1597 90 36 5 chr2 45335054 45335277 -205352577 + MER30 DNA MER1_type 1 230 0 6230 167 42 38 chr2 45335277 45335573 -205352281 + L1MB7 LINE L1 4993 5286 -898 1754 156 3 40 chr2 45335573 45335894 -205351960 + AluJb SINE Alu 1 309 -3 6230 167 42 38 chr2 45335894 45336174 -205351680 + L1MB7 LINE L1 5286 5605 -579 1406 156 78 28 chr2 45336174 45336456 -205351398 + AluJo SINE Alu 1 296 -16 2763 136 15 32 chr2 45336581 45336711 -205351143 + L1MB7 LINE L1 5650 5781 -403 2284 124 0 0 chr2 45336711 45337017 -205350837 + AluSx SINE Alu 1 306 -6 2763 136 15 32 chr2 45337017 45337414 -205350440 + L1MB7 LINE L1 5781 6168 -16 4474 44 9 9 chr2 45338281 45338846 -205349008 - SVA Other Other -821 565 1 283 326 34 0 chr2 45339287 45339465 -205348389 + L1ME LINE L1 5678 5861 -260 2235 122 20 0 chr2 45339576 45339880 -205347974 - AluSx SINE Alu -2 310 1 615 184 72 8 chr2 45339929 45340054 -205347800 - AluJo SINE Alu -177 135 3 195 247 144 62 chr2 45340087 45340184 -205347670 + MIR3 SINE MIR 98 202 -6 1120 122 4 122 chr2 45340250 45340520 -205347334 + L1MA6 LINE L1 6063 6300 0 213 233 0 0 chr2 45341537 45341580 -205346274 + CT-rich Low_complexity Low_complexity 2 44 0 739 177 79 59 chr2 45342035 45342340 -205345514 - L1MC5 LINE L1 -44 7917 7607 1764 144 76 118 chr2 45342373 45342407 -205345447 - L1MB5 LINE L1 -7 6167 6133 2173 90 10 3 chr2 45342407 45342695 -205345159 - AluSg SINE Alu -20 290 1 1764 144 76 118 chr2 45342695 45343030 -205344824 - L1MB5 LINE L1 -41 6133 5826 207 0 0 0 chr2 45343030 45343053 -205344801 + (CA)n Simple_repeat Simple_repeat 2 24 0 1764 144 76 118 chr2 45343053 45343232 -205344622 - L1MB5 LINE L1 -348 5826 5641 2222 95 24 0 chr2 45343233 45343529 -205344325 - AluSp SINE Alu -10 303 1 951 198 99 61 chr2 45343543 45343938 -205343916 - L1MC5 LINE L1 -370 7591 7182 1392 172 38 41 chr2 45343949 45344292 -205343562 - L1MC1 LINE L1 0 6333 5992 195 129 0 0 chr2 45344297 45344328 -205343526 + (TTCCC)n Simple_repeat Simple_repeat 3 33 0 209 176 0 0 chr2 45344427 45344461 -205343393 + CT-rich Low_complexity Low_complexity 3 36 0 1700 170 0 56 chr2 45345513 45345836 -205342018 - AluJo SINE Alu -7 305 1 2199 123 0 0 chr2 45346193 45346587 -205341267 - AluSx SINE Alu 0 394 1 25 0 0 0 chr2 45347063 45347088 -205340766 + AT_rich Low_complexity Low_complexity 1 25 0 5173 117 16 8 chr2 45347088 45347874 -205339980 - L1PA16 LINE L1 -9 6157 5363 1748 186 0 19 chr2 45347874 45348191 -205339663 - AluJb SINE Alu -1 311 1 5173 117 16 8 chr2 45348191 45348233 -205339621 - L1PA16 LINE L1 -803 5363 5323 608 171 0 0 chr2 45348234 45348351 -205339503 + L1 LINE L1 5161 5277 -869 2845 198 13 48 chr2 45348694 45349314 -205338540 - MER77 LTR ERV1 -7 598 1 2134 180 60 10 chr2 45351238 45351740 -205336114 - LTR27 LTR ERV1 0 501 3 23 33 0 0 chr2 45351770 45351800 -205336054 + AT_rich Low_complexity Low_complexity 1 30 0 591 119 0 0 chr2 45351829 45351913 -205335941 - AluJ/FLAM SINE Alu -228 84 1 460 282 8 24 chr2 45351913 45352037 -205335817 + L2 LINE L2 3192 3313 0 1630 146 26 68 chr2 45353007 45353315 -205334539 - AluSg SINE Alu -15 295 1 2334 73 3 0 chr2 45353550 45353839 -205334015 + AluY SINE Alu 17 306 -5 27 73 0 0 chr2 45355143 45355198 -205332656 + AT_rich Low_complexity Low_complexity 1 55 0 1816 137 13 61 chr2 45356281 45356594 -205331260 + AluJo SINE Alu 1 298 -14 31 88 0 0 chr2 45357790 45357870 -205329984 + AT_rich Low_complexity Low_complexity 1 80 0 2036 160 0 3 chr2 45358326 45358639 -205329215 - AluJb SINE Alu 0 312 1 1046 133 7 0 chr2 45359487 45359638 -205328216 - FRAM SINE Alu -30 146 1 1992 94 12 0 chr2 45360750 45361006 -205326848 - AluSx SINE Alu -19 293 35 2115 132 0 13 chr2 45361857 45362161 -205325693 - AluSq SINE Alu -13 300 1 198 0 0 0 chr2 45362617 45362639 -205325215 + (T)n Simple_repeat Simple_repeat 1 22 0 225 0 0 0 chr2 45364006 45364031 -205323823 + (T)n Simple_repeat Simple_repeat 1 25 0 1641 150 3 75 chr2 45364159 45364469 -205323385 + L1MB2 LINE L1 5836 6118 -53 2387 91 0 7 chr2 45364469 45364776 -205323078 + AluY SINE Alu 1 305 -6 1641 150 3 75 chr2 45364776 45364826 -205323028 + L1MB2 LINE L1 6118 6170 -1 1909 175 0 6 chr2 45365333 45365647 -205322207 - AluJo SINE Alu 0 312 1 1675 169 51 0 chr2 45365720 45365993 -205321861 - AluSx SINE Alu -21 291 5 205 368 35 35 chr2 45366108 45366222 -205321632 - L2 LINE L2 -40 3232 3119 2497 66 0 3 chr2 45367005 45367306 -205320548 + AluSg SINE Alu 1 300 -10 1064 262 222 15 chr2 45368171 45368802 -205319052 + L2 LINE L2 2513 3275 -38 364 238 166 20 chr2 45368814 45368965 -205318889 + MIR3 SINE MIR 33 205 -3 2074 68 0 0 chr2 45369683 45369931 -205317923 + AluSc SINE Alu 39 286 -23 216 0 0 0 chr2 45370674 45370698 -205317156 + (T)n Simple_repeat Simple_repeat 1 24 0 2399 69 0 10 chr2 45371699 45372004 -205315850 + AluY SINE Alu 1 302 -9 361 309 32 77 chr2 45372577 45372917 -205314937 + L1ME4a LINE L1 5067 5391 -755 292 258 32 0 chr2 45373219 45373312 -205314542 + L1ME4a LINE L1 5615 5710 -411 521 187 90 0 chr2 45373325 45373459 -205314395 - L1ME2 LINE L1 -1 6163 6018 306 288 85 0 chr2 45373461 45373638 -205314216 + L1ME4a LINE L1 5703 5894 -227 309 165 289 8 chr2 45373664 45373785 -205314069 + L1ME4a LINE L1 5949 6103 -18 244 325 48 64 chr2 45374775 45375086 -205312768 - L2 LINE L2 0 3272 2926 2057 131 13 0 chr2 45375093 45375391 -205312463 + AluSq SINE Alu 9 310 -3 366 314 176 33 chr2 45375445 45375984 -205311870 - L2 LINE L2 -492 2822 2207 244 341 168 6 chr2 45376509 45376676 -205311178 - L2 LINE L2 -1975 1339 1146 441 220 28 50 chr2 45376882 45377023 -205310831 - L1MC5 LINE L1 -61 7900 7763 2017 146 0 0 chr2 45377224 45377538 -205310316 + AluSx SINE Alu 1 314 0 1111 202 15 19 chr2 45377742 45378004 -205309850 + MIR SINE MIR 1 261 -1 2316 88 0 3 chr2 45378346 45378641 -205309213 + AluSc SINE Alu 1 294 -15 301 237 79 0 chr2 45379232 45379308 -205308546 + L2 LINE L2 3136 3217 -55 2118 109 10 0 chr2 45379532 45379826 -205308028 - AluSx SINE Alu -15 297 1 256 170 0 0 chr2 45379936 45379989 -205307865 - L1PB4 LINE L1 0 6156 6104 525 247 31 12 chr2 45380087 45380249 -205307605 - L1PB4 LINE L1 -1 6155 5991 199 250 89 18 chr2 45380263 45380319 -205307535 + L2 LINE L2 3206 3265 -7 1303 139 27 0 chr2 45380373 45380596 -205307258 - L1PA16 LINE L1 0 6166 5938 1907 167 0 10 chr2 45381690 45381995 -205305859 + AluJo SINE Alu 1 302 -10 1508 132 0 18 chr2 45382142 45382361 -205305493 + AluJo SINE Alu 85 299 -13 297 284 43 26 chr2 45382594 45382710 -205305144 - MLT2E LTR ERVL -479 149 32 26 30 0 0 chr2 45382876 45382909 -205304945 + AT_rich Low_complexity Low_complexity 1 33 0 2564 171 34 28 chr2 45383305 45383842 -205304012 - MER34 LTR ERV1 -2 540 1 1617 231 170 19 chr2 45383842 45384408 -205303446 - L2 LINE L2 -538 2776 2126 4762 123 33 16 chr2 45384962 45385726 -205302128 - LTR19C LTR ERV1 0 779 3 1772 136 16 60 chr2 45385925 45386242 -205301612 + AluJo SINE Alu 9 311 -1 2385 85 3 3 chr2 45387220 45387525 -205300329 + AluSc SINE Alu 1 305 -4 445 265 205 10 chr2 45387719 45387919 -205299935 - MIR SINE MIR -15 247 9 389 315 30 60 chr2 45388083 45388283 -205299571 + L1ME4a LINE L1 5468 5661 -501 2321 95 3 0 chr2 45388285 45388579 -205299275 + AluSx SINE Alu 1 295 -17 2408 94 0 0 chr2 45388680 45388979 -205298875 - AluSx SINE Alu -13 299 1 22 0 0 0 chr2 45388989 45389011 -205298843 + AT_rich Low_complexity Low_complexity 1 22 0 402 276 41 24 chr2 45389070 45389240 -205298614 + L1ME4a LINE L1 5703 5875 -246 23 33 0 0 chr2 45389422 45389452 -205298402 + AT_rich Low_complexity Low_complexity 1 30 0 1361 131 23 0 chr2 45390272 45390486 -205297368 - MER30 DNA MER1_type 0 230 12 2088 138 0 0 chr2 45390518 45390816 -205297038 - AluSx SINE Alu -14 298 1 1424 98 75 0 chr2 45391171 45391385 -205296469 + L1PB1 LINE L1 5915 6144 -7 226 367 90 39 chr2 45392028 45392199 -205295655 + L2 LINE L2 449 610 -2704 2212 109 3 0 chr2 45392199 45392493 -205295361 + AluSq SINE Alu 1 295 -18 226 367 90 39 chr2 45392493 45392863 -205294991 + L2 LINE L2 610 1018 -2296 229 216 0 20 chr2 45393114 45393165 -205294689 + L2 LINE L2 1375 1424 -1890 2283 99 0 10 chr2 45393198 45393501 -205294353 + AluSc SINE Alu 1 300 -9 547 211 111 47 chr2 45393695 45393974 -205293880 + L1MC5 LINE L1 7631 7927 -34 441 266 27 21 chr2 45394210 45394398 -205293456 - L1MC5 LINE L1 -32 7929 7741 5835 140 9 6 chr2 45394478 45394998 -205292856 + L1MA4 LINE L1 5259 5779 -521 1951 108 3 86 chr2 45394998 45395323 -205292531 + AluSx SINE Alu 1 298 -14 5835 140 9 6 chr2 45395323 45395838 -205292016 + L1MA4 LINE L1 5779 6291 -9 249 301 180 0 chr2 45395867 45396123 -205291731 + L1 LINE L1 3791 4092 -2054 32 75 0 0 chr2 45396128 45396195 -205291659 + AT_rich Low_complexity Low_complexity 1 67 0 340 345 24 18 chr2 45396241 45396409 -205291445 + L1 LINE L1 4205 4373 -1773 2588 245 67 25 chr2 45396454 45396673 -205291181 + L1MEc LINE L1 124 332 -6064 1818 126 50 0 chr2 45396673 45396951 -205290903 + AluSx SINE Alu 4 295 -17 2588 245 67 25 chr2 45396951 45397515 -205290339 + L1MEc LINE L1 332 954 -5442 1479 244 120 38 chr2 45397515 45398016 -205289838 - MLT1F LTR MaLR 0 542 1 2588 245 67 25 chr2 45398016 45398155 -205289699 + L1MEc LINE L1 954 1086 -5310 876 230 0 0 chr2 45398153 45398362 -205289492 - L1M4 LINE L1 -3662 2484 2276 * 290 200 13 13 chr2 45398680 45398755 -205289099 - L1ME4a LINE L1 0 6121 6047 2166 93 4 0 chr2 45399025 45399304 -205288550 - AluSq SINE Alu -29 284 5 324 341 121 12 chr2 45399361 45399534 -205288320 - L1MC/D LINE L1 -722 5520 5329 356 208 13 0 chr2 45399599 45399676 -205288178 - MER69 DNA AcHobo 0 2526 2449 * 423 171 120 8 chr2 45399671 45399788 -205288066 - MER69 DNA AcHobo -2379 147 18 282 239 76 11 chr2 45400074 45400166 -205287688 + L2 LINE L2 3134 3231 -82 325 211 122 16 chr2 45400524 45400647 -205287207 - L1ME4a LINE L1 -35 6086 5951 2149 131 0 19 chr2 45402105 45402419 -205285435 - AluSx SINE Alu -4 308 1 336 307 39 117 chr2 45404416 45404673 -205283181 - L2 LINE L2 -1 3271 3035 2186 118 7 0 chr2 45404705 45405036 -205282818 + AluJb SINE Alu 3 335 0 2196 117 0 19 chr2 45405149 45405456 -205282398 + AluSx SINE Alu 1 301 -11 483 214 145 8 chr2 45405456 45405577 -205282277 - MIR3 SINE MIR -11 197 55 1899 138 0 45 chr2 45406339 45406650 -205281204 + AluSx SINE Alu 1 297 -15 204 40 0 0 chr2 45406651 45406676 -205281178 + (CA)n Simple_repeat Simple_repeat 2 26 0 2184 62 0 0 chr2 45406842 45407099 -205280755 + AluY SINE Alu 37 293 -18 408 71 0 0 chr2 45407196 45407252 -205280602 + (TC)n Simple_repeat Simple_repeat 1 56 0 296 364 69 85 chr2 45407256 45407646 -205280208 - L2 LINE L2 -20 3252 2869 782 238 22 0 chr2 45408581 45408766 -205279088 + MER5A DNA MER1_type 1 189 0 2368 100 0 0 chr2 45408875 45409174 -205278680 - AluSq SINE Alu -14 299 1 561 121 11 0 chr2 45409350 45409441 -205278413 - MER4E LTR ERV1 -252 527 436 * 1301 130 10 0 chr2 45409437 45409645 -205278209 + MER4E LTR ERV1 531 740 -26 2162 86 7 33 chr2 45410308 45410611 -205277243 + AluSx SINE Alu 1 295 -17 618 235 62 6 chr2 45410676 45410838 -205277016 - MIR SINE MIR -2 260 90 180 241 56 37 chr2 45410845 45410899 -205276955 - L3b LINE CR1 -140 1443 1389 230 369 78 0 chr2 45410924 45411027 -205276827 - L2 LINE L2 -29 3243 3133 950 245 36 0 chr2 45411063 45411312 -205276542 + MIR SINE MIR 3 260 -2 561 195 13 13 chr2 45413359 45413508 -205274346 - L1MEc LINE L1 -4000 2396 2248 369 0 0 0 chr2 45414283 45414324 -205273530 + (CA)n Simple_repeat Simple_repeat 2 42 0 629 295 79 32 chr2 45414388 45414757 -205273097 - MLT1J LTR MaLR -125 386 1 2421 89 3 0 chr2 45414985 45415288 -205272566 - AluSq SINE Alu -9 304 1 234 385 65 26 chr2 45415288 45415639 -205272215 + L2 LINE L2 2334 2698 -616 864 268 107 42 chr2 45415639 45416042 -205271812 - MLT1G1 LTR MaLR -2 593 165 1165 91 19 0 chr2 45416419 45416573 -205271281 - AluSg/x SINE Alu -20 292 136 1783 110 92 18 chr2 45416777 45417049 -205270805 + AluSx SINE Alu 1 292 -20 2502 68 3 0 chr2 45417525 45417833 -205270021 - AluY SINE Alu -2 309 1 2187 108 0 0 chr2 45418371 45418668 -205269186 - AluSx SINE Alu -15 297 1 224 118 0 39 chr2 45418962 45419013 -205268841 + (TTTTTG)n Simple_repeat Simple_repeat 2 50 0 223 299 75 0 chr2 45419447 45419514 -205268340 - L2 LINE L2 0 3272 3201 535 206 24 40 chr2 45419928 45420054 -205267800 + MIR3 SINE MIR 74 197 -11 24 0 0 0 chr2 45420314 45420338 -205267516 + AT_rich Low_complexity Low_complexity 1 24 0 2414 116 39 41 chr2 45420437 45420475 -205267379 - L1MB3 LINE L1 -10 6173 6136 2437 99 0 0 chr2 45420475 45420778 -205267076 - AluSx SINE Alu -9 303 1 2414 116 39 41 chr2 45420778 45421177 -205266677 - L1MB3 LINE L1 -47 6136 5737 1994 153 0 0 chr2 45421526 45421826 -205266028 - AluSx SINE Alu -12 300 1 384 353 27 13 chr2 45422125 45422275 -205265579 - MIR SINE MIR -109 153 2 207 0 0 0 chr2 45423511 45423534 -205264320 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 1474 147 121 23 chr2 45423544 45423809 -205264045 - AluJb SINE Alu -21 291 1 244 204 86 11 chr2 45424020 45424113 -205263741 + L1ME4a LINE L1 5975 6074 -47 296 331 51 19 chr2 45424644 45424801 -205263053 + MIR SINE MIR 92 253 -9 186 43 0 0 chr2 45426008 45426031 -205261823 + (TTTTC)n Simple_repeat Simple_repeat 4 26 0 220 375 0 0 chr2 45426053 45426125 -205261729 - L3b LINE CR1 -131 1452 1381 866 122 0 0 chr2 45426594 45426709 -205261145 - FLAM_C SINE Alu -28 115 1 1980 141 10 3 chr2 45426716 45427013 -205260841 - AluJo SINE Alu -13 299 1 2263 115 0 0 chr2 45428951 45429256 -205258598 + AluSg1 SINE Alu 1 305 -4 2124 71 60 0 chr2 45429774 45430056 -205257798 - AluY SINE Alu -12 299 1 1288 101 0 0 chr2 45430058 45430226 -205257628 - AluSq SINE Alu -12 301 134 2222 77 7 7 chr2 45430226 45430525 -205257329 - AluY SINE Alu -12 299 1 270 254 14 0 chr2 45431185 45431256 -205256598 - MLT1K LTR MaLR 0 588 517 312 252 8 49 chr2 45431558 45431681 -205256173 + L1ME LINE L1 5733 5850 -271 328 248 30 30 chr2 45432361 45432462 -205255392 - 7SK RNA RNA -89 104 4 185 276 17 52 chr2 45432535 45432593 -205255261 + MIR SINE MIR 207 262 0 270 286 203 66 chr2 45432991 45433218 -205254636 - MIR SINE MIR 0 262 5 21 0 0 0 chr2 45433930 45433951 -205253903 + AT_rich Low_complexity Low_complexity 1 21 0 190 309 96 11 chr2 45435195 45435289 -205252565 - MIR SINE MIR -38 224 123 265 196 0 0 chr2 45435305 45435361 -205252493 + L2 LINE L2 3257 3312 -1 * 278 310 24 3 chr2 45435356 45435462 -205252392 - MIR SINE MIR -130 132 26 1098 136 49 162 chr2 45435590 45435791 -205252063 - AluJo SINE Alu 0 312 90 2125 125 0 52 chr2 45435791 45436120 -205251734 - AluSx SINE Alu 0 312 1 1098 136 49 162 chr2 45436120 45436151 -205251703 - AluJo SINE Alu -222 90 57 1156 60 0 0 chr2 45436151 45436301 -205251553 - L1PA6 LINE L1 0 6154 6005 1098 136 49 162 chr2 45436301 45436312 -205251542 - AluJo SINE Alu -255 57 106 249 33 0 0 chr2 45436312 45436342 -205251512 + (TAG)n Simple_repeat Simple_repeat 1 30 0 1098 136 49 162 chr2 45436342 45436404 -205251450 - AluJo SINE Alu -205 107 40 24 53 0 0 chr2 45437188 45437226 -205250628 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 45438126 45438156 -205249698 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 45438228 45438249 -205249605 + AT_rich Low_complexity Low_complexity 1 21 0 1729 155 39 7 chr2 45438285 45438569 -205249285 - AluJb SINE Alu -19 293 1 213 39 0 0 chr2 45438900 45438926 -205248928 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1798 166 0 32 chr2 45439090 45439398 -205248456 + AluJb SINE Alu 2 299 -13 1312 300 135 47 chr2 45439542 45440975 -205246879 - L2 LINE L2 -1 3271 87 1894 143 7 7 chr2 45441200 45441500 -205246354 + AluSx SINE Alu 1 300 -12 196 260 60 0 chr2 45441550 45441600 -205246254 + MIR3 SINE MIR 142 194 -14 2240 109 0 0 chr2 45441712 45442016 -205245838 - AluY SINE Alu -6 305 2 252 111 0 0 chr2 45442107 45442152 -205245702 + (TG)n Simple_repeat Simple_repeat 2 46 0 402 264 66 12 chr2 45442206 45442373 -205245481 - L1ME4a LINE L1 -255 5866 5691 25 75 0 0 chr2 45442660 45442713 -205245141 + AT_rich Low_complexity Low_complexity 1 53 0 2041 145 0 0 chr2 45442815 45443122 -205244732 + AluSx SINE Alu 1 307 0 2307 80 20 0 chr2 45444548 45444849 -205243005 - AluSp SINE Alu -6 307 1 2038 160 0 3 chr2 45445131 45445443 -205242411 + AluJb SINE Alu 1 311 -1 1996 135 24 42 chr2 45445453 45445571 -205242283 + L1MB2 LINE L1 5798 5917 -254 1827 115 0 0 chr2 45445571 45445814 -205242040 + AluSq SINE Alu 5 247 -66 184 30 61 0 chr2 45445814 45445847 -205242007 + A-rich Low_complexity Low_complexity 3 37 0 1996 135 24 42 chr2 45445847 45446106 -205241748 + L1MB2 LINE L1 5915 6169 -2 1770 161 61 0 chr2 45446317 45446597 -205241257 - AluJb SINE Alu -15 297 1 2095 64 0 89 chr2 45446655 45446969 -205240885 + AluY SINE Alu 24 309 -2 1587 179 15 62 chr2 45448726 45449050 -205238804 - AluJo SINE Alu -3 309 1 258 209 164 15 chr2 45450694 45450828 -205237026 - L1ME4a LINE L1 0 6121 5968 1740 158 0 30 chr2 45451048 45451345 -205236509 + AluJo SINE Alu 1 288 -24 21 57 0 0 chr2 45452111 45452146 -205235708 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 45452447 45452476 -205235378 + AT_rich Low_complexity Low_complexity 1 29 0 3563 174 83 21 chr2 45452622 45453307 -205234547 - L1MB3 LINE L1 -3 6180 5539 2204 114 13 0 chr2 45453307 45453605 -205234249 + AluSx SINE Alu 1 302 -10 3563 174 83 21 chr2 45453605 45453716 -205234138 - L1MB3 LINE L1 -644 5539 5436 823 136 0 57 chr2 45453716 45453856 -205233998 - FLAM_C SINE Alu -1 132 1 3563 174 83 21 chr2 45453856 45453901 -205233953 - L1MB3 LINE L1 -747 5436 5286 313 308 208 0 chr2 45454025 45454145 -205233709 + MIR SINE MIR 49 193 -69 2236 102 0 0 chr2 45455339 45455632 -205232222 + AluSc SINE Alu 1 293 -16 955 190 0 6 chr2 45456302 45456465 -205231389 + FRAM SINE Alu 1 162 -4 1103 231 12 4 chr2 45457313 45457556 -205230298 + MIR SINE MIR 17 261 -1 2303 113 7 0 chr2 45457631 45457933 -205229921 - AluSg SINE Alu -6 304 1 1790 156 50 3 chr2 45457959 45458241 -205229613 + AluJb SINE Alu 1 295 -17 1466 193 24 31 chr2 45459135 45459425 -205228429 + AluJo SINE Alu 1 288 -24 628 336 173 15 chr2 45459454 45459859 -205227995 + L3 LINE CR1 1102 1570 -7 225 302 40 8 chr2 45460147 45460273 -205227581 + MARNA DNA Mariner 223 352 -234 280 187 220 44 chr2 45460276 45460367 -205227487 - MER94 DNA DNA 0 134 28 242 342 72 0 chr2 45460385 45460537 -205227317 + MARNA DNA Mariner 360 522 -64 21 36 0 0 chr2 45460650 45460678 -205227176 + AT_rich Low_complexity Low_complexity 1 28 0 261 30 45 45 chr2 45461180 45461246 -205226608 + (TTA)n Simple_repeat Simple_repeat 2 67 0 4411 173 30 30 chr2 45462798 45463867 -205223987 + L1MD2 LINE L1 5141 6205 -154 236 281 75 68 chr2 45464201 45464496 -205223358 - L1MC/D LINE L1 -1903 5905 5609 21 71 0 0 chr2 45465533 45465575 -205222279 + AT_rich Low_complexity Low_complexity 1 42 0 2264 103 3 10 chr2 45465986 45466297 -205221557 - AluSg1 SINE Alu 0 309 1 23 33 0 0 chr2 45467220 45467250 -205220604 + AT_rich Low_complexity Low_complexity 1 30 0 1661 161 74 0 chr2 45467549 45467834 -205220020 - AluJo SINE Alu -6 306 1 270 0 0 0 chr2 45467859 45467889 -205219965 + (A)n Simple_repeat Simple_repeat 1 30 0 229 275 121 27 chr2 45468931 45469080 -205218774 - L1MC/D LINE L1 -2036 5772 5610 324 0 0 0 chr2 45469080 45469116 -205218738 + (CA)n Simple_repeat Simple_repeat 2 37 0 1852 144 3 14 chr2 45469116 45469407 -205218447 - AluJo SINE Alu -24 288 1 2486 55 0 3 chr2 45471716 45472009 -205215845 - AluSc SINE Alu -17 292 1 963 173 0 35 chr2 45472159 45472332 -205215522 - FRAM SINE Alu -11 165 1 335 61 0 0 chr2 45472456 45472505 -205215349 - L1PA6 LINE L1 -3 6151 6103 214 225 0 0 chr2 45473472 45473512 -205214342 - L2 LINE L2 -4 3268 3229 205 178 0 0 chr2 45473778 45473823 -205214031 + T-rich Low_complexity Low_complexity 1 45 0 2242 105 10 3 chr2 45473825 45474131 -205213723 - AluSx SINE Alu -4 308 1 212 348 30 52 chr2 45476299 45476434 -205211420 - L2 LINE L2 0 3313 3182 1161 142 6 0 chr2 45476659 45476828 -205211026 - AluSg/x SINE Alu -11 301 132 2173 132 0 13 chr2 45477320 45477630 -205210224 + AluSx SINE Alu 3 308 -4 1570 113 52 118 chr2 45477664 45477743 -205210111 - MER47A DNA MER2_type -1957 366 283 2240 95 0 0 chr2 45477743 45478051 -205209803 + AluSx SINE Alu 1 308 0 1570 113 52 118 chr2 45478051 45478285 -205209569 - MER47A DNA MER2_type -2040 283 77 2174 121 27 0 chr2 45478285 45478583 -205209271 + AluSx SINE Alu 1 306 -6 1570 113 52 118 chr2 45478583 45478631 -205209223 - MER47A DNA MER2_type -2246 77 27 184 194 145 0 chr2 45479102 45479164 -205208690 + MIR SINE MIR 73 143 -119 348 219 26 52 chr2 45479408 45479563 -205208291 - L1ME4a LINE L1 -1 6120 5970 1763 174 7 7 chr2 45480776 45481069 -205206785 - AluSx SINE Alu -19 293 1 624 339 90 29 chr2 45682765 45683143 -205004711 + L3 LINE CR1 192 592 -985 2113 140 134 74 chr2 45683305 45683805 -205004049 + MER34C LTR ERV1 56 585 0 1473 149 45 26 chr2 45683807 45684075 -205003779 + AluJo SINE Alu 9 281 -31 922 192 81 94 chr2 45684154 45684459 -205003395 + LTR49 LTR ERV1 1 301 -294 318 222 19 0 chr2 45684459 45684567 -205003287 + AluY SINE Alu 2 111 -190 309 146 11 0 chr2 45685044 45685098 -205002756 + Alu SINE Alu 1 40 -262 270 119 0 0 chr2 45685102 45685144 -205002710 + Alu SINE Alu 252 293 -7 2129 95 14 0 chr2 45685199 45685495 -205002359 + AluY SINE Alu 1 300 -11 1626 102 0 0 chr2 45686890 45687115 -205000739 + AluSg/x SINE Alu 86 310 0 368 278 217 39 chr2 45687119 45687349 -205000505 - L2 LINE L2 -1355 1959 1689 6675 139 9 33 chr2 45687861 45688997 -204998857 - HERVH LTR ERV1 -5804 1909 801 2570 137 19 41 chr2 45689057 45689290 -204998564 - HERVH LTR ERV1 -7254 459 239 2278 80 0 7 chr2 45689290 45689589 -204998265 + AluSg SINE Alu 1 297 -13 2570 137 19 41 chr2 45689589 45689823 -204998031 - HERVH LTR ERV1 -7474 239 2 254 56 28 0 chr2 45689968 45690004 -204997850 - U2 snRNA snRNA -147 41 5 228 100 0 0 chr2 45690094 45690124 -204997730 - Alu SINE Alu -187 113 84 925 217 0 43 chr2 45690124 45690354 -204997500 - AluJo SINE Alu -92 220 1 436 0 51 0 chr2 45691255 45691314 -204996540 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 6323 80 13 47 chr2 45691314 45692682 -204995172 - SVA Other Other -551 1363 433 301 214 20 31 chr2 45693250 45693348 -204994506 + (CCG)n Simple_repeat Simple_repeat 2 98 0 312 308 55 11 chr2 45694758 45694849 -204993005 - L2 LINE L2 0 3272 3178 180 0 0 0 chr2 45695104 45695124 -204992730 + (TA)n Simple_repeat Simple_repeat 2 21 0 2126 89 3 3 chr2 45695540 45695832 -204992022 - AluY SINE Alu -19 292 1 771 164 0 57 chr2 45695835 45695975 -204991879 - AluJo/FLAM SINE Alu -170 132 1 729 258 52 21 chr2 45695983 45696309 -204991545 - L1MC4 LINE L1 0 8042 7707 2064 125 0 6 chr2 45696318 45696631 -204991223 - AluSx SINE Alu -1 311 1 1040 168 6 0 chr2 45696633 45696800 -204991054 + MLT1A1 LTR MaLR 198 365 0 800 153 23 0 chr2 45696834 45696965 -204990889 + AluJo SINE Alu 1 134 -178 2132 106 0 0 chr2 45697389 45697682 -204990172 - AluSq SINE Alu -20 293 1 180 284 62 62 chr2 45697930 45698011 -204989843 - L2 LINE L2 -610 2704 2624 304 250 75 99 chr2 45698101 45698227 -204989627 + L1MEd LINE L1 268 387 -5732 2281 99 3 0 chr2 45698227 45698529 -204989325 + AluSq SINE Alu 1 303 -10 304 250 75 99 chr2 45698529 45698654 -204989200 + L1MEd LINE L1 387 513 -5606 279 93 0 23 chr2 45698695 45698738 -204989116 + THE1C LTR MaLR 3 44 -331 940 160 102 39 chr2 45698895 45699110 -204988744 + LTR29 LTR ERV1 311 572 -50 4191 127 61 23 chr2 45699111 45699333 -204988521 - MER50 LTR ERV1 -23 711 499 2107 127 0 0 chr2 45699333 45699633 -204988221 - AluSx SINE Alu -12 300 1 4191 127 61 23 chr2 45699633 45700095 -204987759 - MER50 LTR ERV1 -235 499 1 2023 130 0 0 chr2 45700827 45701120 -204986734 - AluSx SINE Alu -19 293 1 567 171 0 0 chr2 45701142 45701230 -204986624 - AluJ/FLAM SINE Alu -223 89 2 1087 231 67 83 chr2 45701393 45701887 -204985967 - MER34 LTR ERV1 0 542 57 507 212 68 0 chr2 45702060 45702178 -204985676 + FAM SINE Alu 42 167 -18 1554 114 97 63 chr2 45702183 45702482 -204985372 + AluSx SINE Alu 1 309 -3 272 358 20 34 chr2 45702488 45702636 -204985218 - L2 LINE L2 -191 3081 2936 1703 157 4 4 chr2 45702848 45703115 -204984739 + MER31A LTR ERV1 1 267 -218 219 103 0 0 chr2 45703124 45703153 -204984701 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 665 191 6 17 chr2 45703153 45703331 -204984523 + CT-rich Low_complexity Low_complexity 2 177 0 1577 175 15 0 chr2 45703339 45703613 -204984241 - AluJo SINE Alu -34 278 1 1237 114 27 41 chr2 45703614 45703833 -204984021 + MER31A LTR ERV1 270 485 0 980 290 96 6 chr2 45703833 45704187 -204983667 + MLT1L LTR MaLR 229 615 0 1058 88 0 0 chr2 45704201 45704337 -204983517 + AluSq/x SINE Alu 1 136 -176 2175 109 0 0 chr2 45704337 45704641 -204983213 + AluSx SINE Alu 1 304 -8 544 148 0 11 chr2 45704672 45704760 -204983094 - FLAM SINE Alu -19 124 38 2189 109 0 6 chr2 45705468 45705780 -204982074 + AluSx SINE Alu 1 310 -2 305 258 70 47 chr2 45706793 45706921 -204980933 + L1MC4 LINE L1 6574 6704 -1338 * 330 236 18 64 chr2 45706835 45706945 -204980909 - L1MCa LINE L1 -4374 2052 1948 25 0 0 0 chr2 45706945 45706970 -204980884 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr2 45706983 45707017 -204980837 + (TA)n Simple_repeat Simple_repeat 1 34 0 1575 149 62 4 chr2 45707017 45707293 -204980561 - AluJb SINE Alu -14 298 7 2035 136 0 0 chr2 45707303 45707611 -204980243 - AluSx SINE Alu -4 308 1 1977 216 137 30 chr2 45707641 45708205 -204979649 - MLT1E3 LTR MaLR 0 624 1 2175 107 0 0 chr2 45708320 45708620 -204979234 - AluSg SINE Alu -10 300 1 235 127 18 36 chr2 45708706 45708761 -204979093 + CT-rich Low_complexity Low_complexity 3 56 0 2082 123 10 0 chr2 45708763 45709071 -204978783 - AluSx SINE Alu 0 312 2 1194 218 33 19 chr2 45709640 45709911 -204977943 + MER90 LTR ERV1 304 578 -36 404 177 0 0 chr2 45709933 45709995 -204977859 - AluJb SINE Alu -124 188 127 973 236 62 42 chr2 45710040 45710328 -204977526 + MER97b DNA MER1_type? 184 477 -576 286 186 17 0 chr2 45710400 45710459 -204977395 + MER97c DNA MER1_type? 484 543 -547 797 138 0 0 chr2 45710921 45711037 -204976817 + AluJb SINE Alu 2 117 -195 189 0 0 0 chr2 45711037 45711058 -204976796 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 348 296 31 6 chr2 45711077 45711236 -204976618 + MER97b DNA MER1_type? 886 1048 -5 321 387 72 21 chr2 45711266 45711501 -204976353 + L2 LINE L2 2951 3197 -75 1999 144 3 0 chr2 45711687 45711992 -204975862 - AluSx SINE Alu -6 306 1 748 160 6 28 chr2 45712029 45712210 -204975644 + CT-rich Low_complexity Low_complexity 4 180 0 1564 169 4 0 chr2 45712210 45712476 -204975378 - AluJb SINE Alu -45 267 1 915 109 0 34 chr2 45712963 45713110 -204974744 + FLAM_C SINE Alu 1 142 -1 1353 199 6 37 chr2 45713112 45713433 -204974421 + AluJo SINE Alu 1 311 -1 1005 105 0 0 chr2 45714443 45714576 -204973278 + AluSq/x SINE Alu 1 133 -180 458 180 0 30 chr2 45714580 45714680 -204973174 + LTR7 LTR ERV1 347 443 -7 4105 33 21 10 chr2 45714835 45715357 -204972497 - SVA Other Other -858 528 1 1264 219 107 39 chr2 45715641 45716148 -204971706 - MLT2E LTR ERVL -15 613 3 2115 103 0 32 chr2 45716237 45716549 -204971305 - AluSx SINE Alu -10 302 1 715 125 8 47 chr2 45717453 45717601 -204970253 + FLAM_C SINE Alu 3 133 0 369 0 0 0 chr2 45717933 45717974 -204969880 + (CA)n Simple_repeat Simple_repeat 2 42 0 893 139 29 0 chr2 45718003 45718140 -204969714 + AluSq/x SINE Alu 1 141 -172 930 223 0 0 chr2 45718142 45718326 -204969528 + L1M4 LINE L1 5484 5667 -511 1933 149 0 0 chr2 45718327 45718616 -204969238 + AluSx SINE Alu 1 289 -23 1641 170 30 12 chr2 45718665 45719053 -204968801 - L1M2 LINE L1 -743 5403 5034 * 2157 137 36 80 chr2 45719049 45719334 -204968520 + L1MA5 LINE L1 5460 5715 -585 1553 135 79 0 chr2 45719334 45719601 -204968253 + AluSx SINE Alu 5 292 -20 2157 137 36 80 chr2 45719601 45719818 -204968036 + L1MA5 LINE L1 5715 5940 -360 366 200 50 0 chr2 45719999 45720079 -204967775 + MARNA DNA Mariner 279 362 -224 2164 82 6 58 chr2 45720644 45720973 -204966881 + AluSx SINE Alu 1 312 0 188 277 21 0 chr2 45721232 45721279 -204966575 + L2 LINE L2 3223 3270 -2 180 286 24 0 chr2 45721300 45721342 -204966512 - MIR3 SINE MIR -33 175 133 307 308 0 0 chr2 45721462 45721540 -204966314 - L3b LINE CR1 -207 1376 1299 1606 162 55 82 chr2 45721562 45721963 -204965891 + MLT1B LTR MaLR 1 390 0 2198 108 0 13 chr2 45722738 45723045 -204964809 - AluSx SINE Alu -9 303 1 240 306 28 56 chr2 45723661 45723721 -204964133 - MIR3 SINE MIR -22 186 129 2112 143 36 33 chr2 45723721 45724084 -204963770 - THE1B LTR MaLR 0 364 1 240 306 28 56 chr2 45724084 45724131 -204963723 - MIR3 SINE MIR -79 129 82 1804 158 3 10 chr2 45724207 45724517 -204963337 + AluJb SINE Alu 1 308 -4 355 329 73 26 chr2 45724646 45724880 -204962974 + L3 LINE CR1 1039 1283 -294 359 117 33 33 chr2 45725575 45725635 -204962219 + MER91B DNA MER1_type 4 63 -127 2143 93 21 0 chr2 45725870 45726160 -204961694 - AluSx SINE Alu -16 296 1 296 79 0 0 chr2 45727307 45727345 -204960509 - THE1-int LTR MaLR -125 1455 1418 22 35 0 0 chr2 45727346 45727375 -204960479 + GC_rich Low_complexity Low_complexity 1 29 0 430 272 37 58 chr2 45727519 45727668 -204960186 + MER5A DNA MER1_type 3 149 -40 2374 76 0 0 chr2 45727668 45727969 -204959885 - AluSx SINE Alu -11 301 1 430 272 37 58 chr2 45727969 45728010 -204959844 + MER5A DNA MER1_type 149 189 0 361 217 58 10 chr2 45728606 45728721 -204959133 + MIR SINE MIR 39 154 -63 888 201 112 12 chr2 45728943 45729045 -204958809 + Charlie4a DNA MER1_type 222 312 -1649 2153 99 7 0 chr2 45729045 45729337 -204958517 + AluSg SINE Alu 1 294 -16 888 201 112 12 chr2 45729337 45729483 -204958371 + Charlie4a DNA MER1_type 312 495 -13 2299 75 0 0 chr2 45730224 45730519 -204957335 + AluY SINE Alu 1 295 -16 2340 72 0 7 chr2 45730698 45731002 -204956852 + AluSq SINE Alu 5 306 -7 183 333 196 0 chr2 45731595 45731748 -204956106 + L2 LINE L2 2131 2313 -1001 264 30 0 0 chr2 45732762 45732795 -204955059 + (CAA)n Simple_repeat Simple_repeat 2 34 0 639 0 0 0 chr2 45733271 45733342 -204954512 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 2304 89 10 0 chr2 45733350 45733642 -204954212 - AluSq SINE Alu -18 295 1 393 320 30 40 chr2 45733866 45734066 -204953788 + MLT1J LTR MaLR 5 202 -309 265 310 43 60 chr2 45734143 45734319 -204953535 + MLT1J LTR MaLR 224 396 -115 550 159 6 27 chr2 45734319 45734456 -204953398 - MER53 DNA DNA 0 189 1 2347 75 0 40 chr2 45734577 45734898 -204952956 - AluSg1 SINE Alu -1 308 1 1625 181 39 0 chr2 45734902 45735183 -204952671 - AluJb SINE Alu -20 292 1 1095 119 19 19 chr2 45735220 45735380 -204952474 - AluSq SINE Alu -95 218 59 184 211 26 0 chr2 45736490 45736528 -204951326 + MIR SINE MIR 122 160 -102 247 189 14 81 chr2 45736548 45736622 -204951232 + MIR SINE MIR 122 190 -72 2128 121 0 26 chr2 45737191 45737497 -204950357 + AluSx SINE Alu 8 305 -7 299 205 169 0 chr2 45737497 45737580 -204950274 + MIR SINE MIR 48 144 -64 2091 96 24 7 chr2 45737586 45737878 -204949976 + AluSg SINE Alu 2 298 -12 798 216 13 70 chr2 45738316 45738543 -204949311 + MER67C LTR ERV1 123 336 -374 1324 237 70 13 chr2 45738562 45738934 -204948920 + MSTD LTR MaLR 2 394 -2 1132 144 10 10 chr2 45738939 45739134 -204948720 + MER67C LTR ERV1 516 710 0 474 240 35 146 chr2 45739237 45739524 -204948330 + MIR SINE MIR 8 262 0 27 0 0 0 chr2 45739618 45739645 -204948209 + AT_rich Low_complexity Low_complexity 1 27 0 377 306 60 23 chr2 45739872 45739944 -204947910 - L1MC4a LINE L1 -1897 5911 5843 3374 120 12 64 chr2 45739944 45740307 -204947547 - LTR26B LTR ERV1 0 531 206 1957 155 26 0 chr2 45740307 45740610 -204947244 - AluSx SINE Alu -1 311 1 3374 120 12 64 chr2 45740610 45740806 -204947048 - LTR26B LTR ERV1 -325 206 1 377 306 60 23 chr2 45740806 45740949 -204946905 - L1MC4a LINE L1 -1965 5843 5688 291 294 80 40 chr2 45741002 45741259 -204946595 - L1MC4a LINE L1 -568 5553 5283 2266 88 0 52 chr2 45741259 45741587 -204946267 - AluSx SINE Alu -1 311 1 291 294 80 40 chr2 45741587 45741605 -204946249 - L1MC4a LINE L1 -838 5283 5267 246 269 0 0 chr2 45741944 45741996 -204945858 - MLT1A1 LTR MaLR -147 218 167 1156 158 20 20 chr2 45741997 45742193 -204945661 - MLT1A1 LTR MaLR -169 196 1 278 337 60 41 chr2 45742403 45742857 -204944997 - L2 LINE L2 -224 3048 2508 2230 107 3 0 chr2 45742857 45743146 -204944708 + AluSx SINE Alu 1 290 -22 278 337 60 41 chr2 45743146 45743283 -204944571 - L2 LINE L2 -764 2508 2375 758 202 0 0 chr2 45743480 45743609 -204944245 - FLAM_C SINE Alu 0 133 5 516 239 7 43 chr2 45743641 45743779 -204944075 - MLT1K LTR MaLR -314 274 142 379 266 81 16 chr2 45743908 45744032 -204943822 + L2 LINE L2 3182 3313 0 1023 205 37 19 chr2 45744333 45744548 -204943306 + MER20 DNA MER1_type 1 219 0 1449 164 118 8 chr2 45744764 45745027 -204942827 + AluSg1 SINE Alu 1 292 -17 218 243 122 2 chr2 45745701 45745821 -204942033 + MIR SINE MIR 30 162 -78 505 227 109 0 chr2 45745969 45746097 -204941757 - FRAM SINE Alu -1 175 34 1577 162 26 0 chr2 45746934 45747206 -204940648 + AluJb SINE Alu 30 308 -4 1763 117 104 0 chr2 45747480 45747729 -204940125 + AluSx SINE Alu 21 295 -17 1400 161 85 31 chr2 45747927 45748209 -204939645 - AluJb SINE Alu 0 308 13 2064 126 0 3 chr2 45748225 45748545 -204939309 - AluSx SINE Alu 0 319 1 278 277 0 10 chr2 45748555 45748656 -204939198 - L1ME L